Citrus Sinensis ID: 008154
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 576 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FNF2 | 652 | Starch synthase 1, chloro | yes | no | 0.902 | 0.797 | 0.790 | 0.0 | |
| P93568 | 641 | Soluble starch synthase 1 | N/A | no | 0.930 | 0.836 | 0.747 | 0.0 | |
| Q0DEC8 | 641 | Soluble starch synthase 1 | yes | no | 0.911 | 0.819 | 0.743 | 0.0 | |
| A2Y9M4 | 641 | Soluble starch synthase 1 | N/A | no | 0.911 | 0.819 | 0.741 | 0.0 | |
| Q43654 | 647 | Starch synthase 1, chloro | N/A | no | 0.946 | 0.842 | 0.708 | 0.0 | |
| Q9MAC8 | 792 | Starch synthase 2, chloro | no | no | 0.828 | 0.602 | 0.515 | 1e-143 | |
| Q43847 | 767 | Granule-bound starch synt | N/A | no | 0.828 | 0.621 | 0.5 | 1e-135 | |
| Q43093 | 752 | Granule-bound starch synt | N/A | no | 0.828 | 0.634 | 0.480 | 1e-134 | |
| Q7XE48 | 749 | Soluble starch synthase 2 | no | no | 0.828 | 0.636 | 0.490 | 1e-134 | |
| Q6Z2T8 | 694 | Soluble starch synthase 2 | no | no | 0.828 | 0.687 | 0.490 | 1e-133 |
| >sp|Q9FNF2|SSY1_ARATH Starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/520 (79%), Positives = 472/520 (90%)
Query: 56 GEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAA 115
G + V N+VFVT+EAAPYSKTGGLGDVCGSLP+ALA RGHRVMV+SPRY NGTAA
Sbjct: 132 GIPSGKAEVVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAA 191
Query: 116 DENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFG 175
D+N+ AKDLG + + CFGG QE++F+HEYR+GVDWVFVDH SYHRPGNPYGD GAFG
Sbjct: 192 DKNYARAKDLGIRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFG 251
Query: 176 DNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDA 235
DNQFR+TLLC+AACEAPLVLPLGGFTYGEK +FLVNDWHAGLVP+LLA+KYRP+GVYKDA
Sbjct: 252 DNQFRFTLLCHAACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDA 311
Query: 236 RSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV 295
RSIL+IHNL+HQGVEPAATY NLGLPSEWYGA+ WVFPTWARTHALDTGEAVNVLKGAIV
Sbjct: 312 RSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIV 371
Query: 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHY 355
T+DR++TVS+GY+WEITTVEGGYGL ++LSSRKSV+NGITNGI++ EWNPS+DEHI HY
Sbjct: 372 TSDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHY 431
Query: 356 SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFV 415
S DD+S K++CK+ALQKELGLPIRP+CP+IGFIGRLDYQKGIDLI+ A P+++ DDIQFV
Sbjct: 432 SADDVSEKIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFV 491
Query: 416 MLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 475
MLGSGDP++ESWMR E TY+DK+RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY
Sbjct: 492 MLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 551
Query: 476 AMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535
AMRYGTIPVVH TGGLRDTVENFNP+A G+G GTGW F PLS++SM++ALR A TYRE
Sbjct: 552 AMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATYRE 611
Query: 536 HKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYI 575
+K SWEGLMRRGM ++Y+WENAA+QYEQVF+W +DPPY+
Sbjct: 612 YKQSWEGLMRRGMTRNYSWENAAVQYEQVFQWVFMDPPYV 651
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 1 |
| >sp|P93568|SSY1_SOLTU Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/542 (74%), Positives = 467/542 (86%), Gaps = 6/542 (1%)
Query: 34 HEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPV 93
H+++ + +D ED E ++ ++++NI+FVTAEAAPYSKTGGLGDVCGSLP+
Sbjct: 105 HDIVANDRD------DLSEDTEEMEETPIKLTFNIIFVTAEAAPYSKTGGLGDVCGSLPM 158
Query: 94 ALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWV 153
ALAARGHRVMVVSPRY NG +DE + A DL + CFG QE+AF+HEYR GVDWV
Sbjct: 159 ALAARGHRVMVVSPRYLNGGPSDEKYANAVDLDVRATVHCFGDAQEVAFYHEYRAGVDWV 218
Query: 154 FVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW 213
FVDH SY RPG PYGDI GAFGDNQFR+TLL +AACEAPLVLPLGGFTYGEKC+FL NDW
Sbjct: 219 FVDHSSYCRPGTPYGDIYGAFGDNQFRFTLLSHAACEAPLVLPLGGFTYGEKCLFLANDW 278
Query: 214 HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFP 273
HA LVP+LLA+KYRP+GVYKDARSI+ IHN++HQGVEPA TY NLGLP +WYGA+EW+FP
Sbjct: 279 HAALVPLLLAAKYRPYGVYKDARSIVAIHNIAHQGVEPAVTYNNLGLPPQWYGAVEWIFP 338
Query: 274 TWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNG 333
TWAR HALDTGE VNVLKGAI ADR+LTVS+GYSWEITT EGGYGLHE+LSSR+SVLNG
Sbjct: 339 TWARAHALDTGETVNVLKGAIAVADRILTVSQGYSWEITTPEGGYGLHELLSSRQSVLNG 398
Query: 334 ITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDY 393
ITNGID+ +WNPS+DEHIASHYSI+DLSGKVQCK LQKELGLPIRPDCPLIGFIGRLDY
Sbjct: 399 ITNGIDVNDWNPSTDEHIASHYSINDLSGKVQCKTDLQKELGLPIRPDCPLIGFIGRLDY 458
Query: 394 QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 453
QKG+D+I A PE++ +D+Q VMLGSG+ Q+E WMR TE +KDK+R WVGFNVP+SHRI
Sbjct: 459 QKGVDIILSAIPELMQNDVQVVMLGSGEKQYEDWMRHTENLFKDKFRAWVGFNVPVSHRI 518
Query: 454 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS 513
TAGCDILLMPSRFEPCGLNQLYAMRYGTIP+VH+TGGLRDTV++FNP+A+EG GEGTGW+
Sbjct: 519 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPIVHSTGGLRDTVKDFNPYAQEGIGEGTGWT 578
Query: 514 FLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPP 573
F PL+ E +L L+ AI TY EHKSSWEGLMRRGM +DY+WENAAIQYEQVF WA IDPP
Sbjct: 579 FSPLTSEKLLDTLKLAIGTYTEHKSSWEGLMRRGMGRDYSWENAAIQYEQVFTWAFIDPP 638
Query: 574 YI 575
Y+
Sbjct: 639 YV 640
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Plays a minor role in starch synthesis in storage organs (tubers), but may contribute to the deposition of transient starch in chloroplasts of leaves. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q0DEC8|SSY1_ORYSJ Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/527 (74%), Positives = 460/527 (87%), Gaps = 2/527 (0%)
Query: 49 KKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108
++ E ++ +++AQ +V+ ++VFVT EA+PY+K+GGLGDVCGSLP+ALA RGHRVMVV PR
Sbjct: 116 QESEIMDVKEQAQAKVTRSVVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPR 175
Query: 109 YFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYG 168
Y NG A ++NF A +KI CFGGE E+ FFHEYR+ VDWVFVDHPSYHRPGN YG
Sbjct: 176 YMNG-ALNKNFANAFYTEKHIKIPCFGGEHEVTFFHEYRDSVDWVFVDHPSYHRPGNLYG 234
Query: 169 DINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRP 228
D GAFGDNQFRYTLLCYAACEAPL+L LGG+ YG+KC+F+VNDWHA LVPVLLA+KYRP
Sbjct: 235 DNFGAFGDNQFRYTLLCYAACEAPLILELGGYIYGQKCMFVVNDWHASLVPVLLAAKYRP 294
Query: 229 HGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVN 288
+GVY+DARS+LVIHNL+HQGVEPA+TY +LGLP EWYGALEWVFP WAR HALD GEAVN
Sbjct: 295 YGVYRDARSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVN 354
Query: 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSD 348
LKGA+VTADR++TVS+GYSWE+TT EGG GL+E+LSSRKSVLNGI NGIDI +WNPS+D
Sbjct: 355 FLKGAVVTADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTD 414
Query: 349 EHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL 408
+ + HYS+DDLSGK +CK LQKELGLPIRPD PLIGFIGRLDYQKGIDLI+LA P+++
Sbjct: 415 KFLPYHYSVDDLSGKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLM 474
Query: 409 ADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEP 468
D+IQFVMLGSGDP FE WMR TE+ Y+DK+RGWVGF+VP+SHRITAGCDILLMPSRFEP
Sbjct: 475 RDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEP 534
Query: 469 CGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528
CGLNQLYAM+YGT+PVVH TGGLRDTVENFNPFA +G +GTGW+F PL+ E ML ALR
Sbjct: 535 CGLNQLYAMQYGTVPVVHGTGGLRDTVENFNPFAEKGE-QGTGWAFSPLTIEKMLWALRM 593
Query: 529 AIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYI 575
AI TYREHKSSWEGLM+RGM D+TW++AA QYEQ+FEWA +D PY+
Sbjct: 594 AISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQIFEWAFMDQPYV 640
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Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|A2Y9M4|SSY1_ORYSI Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/527 (74%), Positives = 460/527 (87%), Gaps = 2/527 (0%)
Query: 49 KKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108
++ E ++ +++AQ +V+ ++VFVT EA+PY+K+GGLGDVCGSLP+ALA RGHRVMVV PR
Sbjct: 116 QESEIMDVKEQAQAKVTRSVVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPR 175
Query: 109 YFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYG 168
Y NG A ++NF A +KI CFGGE E+ FFHEYR+ VDWVFVDHPSYHRPGN YG
Sbjct: 176 YMNG-ALNKNFANAFYTEKHIKIPCFGGEHEVTFFHEYRDSVDWVFVDHPSYHRPGNLYG 234
Query: 169 DINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRP 228
D GAFGDNQFRYTLLCYAACEAPL+L LGG+ YG+KC+F+VNDWHA LVPVLLA+KYRP
Sbjct: 235 DNFGAFGDNQFRYTLLCYAACEAPLILELGGYIYGQKCMFVVNDWHASLVPVLLAAKYRP 294
Query: 229 HGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVN 288
+GVY+DARS+LVIHNL+HQGVEPA+TY +LGLP EWYGALEWVFP WAR HALD GEAVN
Sbjct: 295 YGVYRDARSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVN 354
Query: 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSD 348
LKGA+VTADR++TVS+GYSWE+TT EGG GL+E+LSSRKSVLNGI NGIDI +WNPS+D
Sbjct: 355 FLKGAVVTADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTD 414
Query: 349 EHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL 408
+ + HYS+DDLSGK +CK LQ+ELGLPIRPD PLIGFIGRLDYQKGIDLI+LA P+++
Sbjct: 415 KFLPYHYSVDDLSGKAKCKAELQEELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLM 474
Query: 409 ADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEP 468
D+IQFVMLGSGDP FE WMR TE+ Y+DK+RGWVGF+VP+SHRITAGCDILLMPSRFEP
Sbjct: 475 RDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEP 534
Query: 469 CGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528
CGLNQLYAM+YGT+PVVH TGGLRDTVENFNPFA +G +GTGW+F PL+ E ML ALR
Sbjct: 535 CGLNQLYAMQYGTVPVVHGTGGLRDTVENFNPFAEKGE-QGTGWAFSPLTIEKMLWALRM 593
Query: 529 AIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYI 575
AI TYREHKSSWEGLM+RGM D+TW++AA QYEQ+FEWA +D PY+
Sbjct: 594 AISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQIFEWAFMDQPYV 640
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Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q43654|SSY1_WHEAT Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/549 (70%), Positives = 463/549 (84%), Gaps = 4/549 (0%)
Query: 27 LFLLRVYHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGD 86
L L + + IDS I + E ++ +D+ Q +V+ +IVFVT EAAPY+K+GGLGD
Sbjct: 102 LLLEGIAEDSIDSI--IVAASEQDSEIMDAKDQPQAKVTRSIVFVTGEAAPYAKSGGLGD 159
Query: 87 VCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146
VCGSLP+ALAARGHRVMVV PRY NG++ D+N+ A +KI CFGG E+ FFHEY
Sbjct: 160 VCGSLPIALAARGHRVMVVMPRYLNGSS-DKNYAKALYTAKHIKIPCFGGSHEVTFFHEY 218
Query: 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKC 206
R+ VDWVFVDHPSYHRPG+ YGD GAFGDNQFRYTLLCYAACEAPL+L LGG+ YG+ C
Sbjct: 219 RDNVDWVFVDHPSYHRPGSLYGDNFGAFGDNQFRYTLLCYAACEAPLILELGGYIYGQNC 278
Query: 207 IFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYG 266
+F+VNDWHA LVPVLLA+KYRP+GVY+D+RS LVIHNL+HQGVEPA+TY +LGLP EWYG
Sbjct: 279 MFVVNDWHASLVPVLLAAKYRPYGVYRDSRSTLVIHNLAHQGVEPASTYPDLGLPPEWYG 338
Query: 267 ALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSS 326
ALEWVFP WAR HALD GEAVN LKGA+VTADR++TVS+GYSWE+TT EGG GL+E+LSS
Sbjct: 339 ALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSWEVTTAEGGQGLNELLSS 398
Query: 327 RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386
RKSVLNGI NGIDI +WNP++D+ + HYS+DDLSGK +CK LQKELGLP+R D PLIG
Sbjct: 399 RKSVLNGIVNGIDINDWNPTTDKCLPHHYSVDDLSGKAKCKAELQKELGLPVREDVPLIG 458
Query: 387 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN 446
FIGRLDYQKGIDLI++A PE++ +D+QFVMLGSGDP FE WMR TE++YKDK+RGWVGF+
Sbjct: 459 FIGRLDYQKGIDLIKMAIPELMREDVQFVMLGSGDPIFEGWMRSTESSYKDKFRGWVGFS 518
Query: 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGS 506
VP+SHRITAGCDILLMPSRFEPCGLNQLYAM+YGT+PVVH TGGLRDTVE FNPF +G
Sbjct: 519 VPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVETFNPFGAKGE 578
Query: 507 GEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 566
EGTGW+F PL+ + ML ALR A+ T+REHK SWEGLM+RGM KD+TW++AA QYEQ+FE
Sbjct: 579 -EGTGWAFSPLTVDKMLWALRTAMSTFREHKPSWEGLMKRGMTKDHTWDHAAEQYEQIFE 637
Query: 567 WASIDPPYI 575
WA +D PY+
Sbjct: 638 WAFVDQPYV 646
|
Triticum aestivum (taxid: 4565) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q9MAC8|SSY2_ARATH Starch synthase 2, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/506 (51%), Positives = 329/506 (65%), Gaps = 29/506 (5%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
N++ V AE AP+SKTGGLGDV G+LP +LA RGHRVMVV PRY + AKDLG
Sbjct: 302 NVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRY-------AEYAEAKDLG 354
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDINGAFGDNQFRYTLLC 185
+ G + E+ +FH + +GVD+VF+D P + H N YG G D R L C
Sbjct: 355 VRKRYKVAGQDMEVMYFHAFIDGVDFVFIDSPEFRHLSNNIYG---GNRLDILKRMVLFC 411
Query: 186 YAACEAPLVLPLGGFTYGE-KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 244
AA E P +P GG YG+ F+ NDWH L+PV L + YR HG+ K RS+LVIHN+
Sbjct: 412 KAAVEVPWYVPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNI 471
Query: 245 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304
+HQG P + + LPS + + + P GE N+ + ADR+LTVS
Sbjct: 472 AHQGRGPVDDFSYVDLPSHYLDSFKLYDPV--------GGEHFNIFAAGLKAADRVLTVS 523
Query: 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL 360
GYSWE+ T+EGG+GLH I++ GI NGID EWNP D ++ S +YS+++L
Sbjct: 524 HGYSWEVKTLEGGWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENL 583
Query: 361 S-GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGS 419
GK QCK ALQKELGLP+RPD PLIGFIGRLD+QKG+DLI A P +++ D+Q VMLG+
Sbjct: 584 HIGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGT 643
Query: 420 GDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY 479
G P E +R E Y+DK RGWVGF+V +HRITAG DILLMPSRFEPCGLNQLYAM Y
Sbjct: 644 GRPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMNY 703
Query: 480 GTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSS 539
GTIPVVHA GGLRDTV+ F+P+ S G GW+F ++ AL + TYRE+K S
Sbjct: 704 GTIPVVHAVGGLRDTVQQFDPY----SETGLGWTFDSAEAGKLIHALGNCLLTYREYKES 759
Query: 540 WEGLMRRGMEKDYTWENAAIQYEQVF 565
WEGL RRGM +D +W+NAA +YE+V
Sbjct: 760 WEGLQRRGMTQDLSWDNAAEKYEEVL 785
|
Involved in the synthesis of glycan chains within amylopectin in leaves. Is required to produce chains with a degree of polymerization of 12 to 25 (DP12-DP25). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q43847|SSY2_SOLTU Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/506 (50%), Positives = 320/506 (63%), Gaps = 29/506 (5%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
NI+ V +E AP+SKTGGLGDV G+LP ALA RGHRVMVV+PRY +N+ +D G
Sbjct: 277 NIILVASECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRY-------DNYPEPQDSG 329
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVD-HPSYHRPGNPYGDINGAFGDNQFRYTLLC 185
G + E+ +F + +GVD+VF+D H H N YG G D R L C
Sbjct: 330 VRKIYKVDGQDVEVTYFQAFIDGVDFVFIDSHMFRHIGNNIYG---GNRVDILKRMVLFC 386
Query: 186 YAACEAPLVLPLGGFTYGE-KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 244
AA E P +P GG YG+ +F+ NDWH L+PV L + YR +G+ RS+LVIHN+
Sbjct: 387 KAAIEVPWHVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGIMNYTRSVLVIHNI 446
Query: 245 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304
+HQG P + + LP + + P GE N+ + TADR++TVS
Sbjct: 447 AHQGRGPLEDFSYVDLPPHYMDPFKLYDPV--------GGEHFNIFAAGLKTADRVVTVS 498
Query: 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL 360
GYSWE+ T +GG+GLH+I++ L GI NGID EWNP D H+ S +YS+D L
Sbjct: 499 HGYSWELKTSQGGWGLHQIINENDWKLQGIVNGIDTKEWNPELDVHLQSDGYMNYSLDTL 558
Query: 361 -SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGS 419
+GK QCK ALQKELGLP+R D PLIGFIGRLD QKG+DLI A P ++ D+Q VMLG+
Sbjct: 559 QTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGT 618
Query: 420 GDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY 479
G E +R E + DK RGWVGF+V SHRITAG DILLMPSRFEPCGLNQLYAM+Y
Sbjct: 619 GRRDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMKY 678
Query: 480 GTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSS 539
GTIPVVHA GGLRDTV+ F+PF + G GW+F ++ AL + TYRE+K S
Sbjct: 679 GTIPVVHAVGGLRDTVQPFDPF----NESGLGWTFSRAEASQLIHALGNCLLTYREYKKS 734
Query: 540 WEGLMRRGMEKDYTWENAAIQYEQVF 565
WEG+ R M +D +W+NAA YE+V
Sbjct: 735 WEGIQTRCMTQDLSWDNAAQNYEEVL 760
|
Accounts for only 10 to 15% of the total soluble starch synthase activity in tubers. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q43093|SSG2_PEA Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/506 (48%), Positives = 319/506 (63%), Gaps = 29/506 (5%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
NI+ V+AE AP+SKTGGLGDV GSLP ALA RGHRVM+V+P Y N+ A D+G
Sbjct: 262 NIILVSAECAPWSKTGGLGDVAGSLPKALARRGHRVMIVAPHY-------GNYAEAHDIG 314
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHR-PGNPYGDINGAFGDNQFRYTLLC 185
+ G + E+ +FH Y +GVD VF+D P + N YG G D R L C
Sbjct: 315 VRKRYKVAGQDMEVTYFHTYIDGVDIVFIDSPIFRNLESNIYG---GNRLDILRRMVLFC 371
Query: 186 YAACEAPLVLPLGGFTYGE-KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 244
AA E P +P GG YG+ +F+ NDWH L+PV L + YR HG+ RS+LVIHN+
Sbjct: 372 KAAVEVPWHVPCGGICYGDGNLVFIANDWHTALLPVYLKAYYRDHGLMNYTRSVLVIHNI 431
Query: 245 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304
+HQG P + + L + + P GE N+ + TADR++TVS
Sbjct: 432 AHQGRGPVEDFNTVDLSGNYLDLFKMYDPV--------GGEHFNIFAAGLKTADRIVTVS 483
Query: 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL 360
GY+WE+ T EGG+GLH I++ GI NG+D +WNP D ++ S +Y++ L
Sbjct: 484 HGYAWELKTSEGGWGLHNIINESDWKFRGIVNGVDTKDWNPQFDAYLTSDGYTNYNLKTL 543
Query: 361 -SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGS 419
+GK QCK ALQ+ELGLP+R D P+I FIGRLD+QKG+DLI A P +++ D+Q VMLG+
Sbjct: 544 QTGKRQCKAALQRELGLPVREDVPIISFIGRLDHQKGVDLIAEAIPWMMSHDVQLVMLGT 603
Query: 420 GDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY 479
G E +++ EA + DK R WVGF+V ++HRITAG DILLMPSRFEPCGLNQLYAM Y
Sbjct: 604 GRADLEQMLKEFEAQHCDKIRSWVGFSVKMAHRITAGSDILLMPSRFEPCGLNQLYAMSY 663
Query: 480 GTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSS 539
GT+PVVH GGLRDTV+ FNPF G GW+F ++ AL + TY+++K S
Sbjct: 664 GTVPVVHGVGGLRDTVQPFNPFDE----SGVGWTFDRAEANKLMAALWNCLLTYKDYKKS 719
Query: 540 WEGLMRRGMEKDYTWENAAIQYEQVF 565
WEG+ RGM +D +W+NAA QYE+V
Sbjct: 720 WEGIQERGMSQDLSWDNAAQQYEEVL 745
|
Pisum sativum (taxid: 3888) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q7XE48|SSY21_ORYSJ Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/506 (49%), Positives = 325/506 (64%), Gaps = 29/506 (5%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
NI+ V AE AP+SKTGGLGDV G+LP ALA RGHRVMVV P Y +N+ + LG
Sbjct: 259 NIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMY-------KNYAEPQQLG 311
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNP-YGDINGAFGDNQFRYTLLC 185
+ G + E+ ++H Y +GVD+VF+D+P +H N YG G D R LLC
Sbjct: 312 EPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYG---GDRTDILKRMVLLC 368
Query: 186 YAACEAPLVLPLGGFTYGE-KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 244
AA E P +P GG+ YG+ +FL NDWH L+PV L + Y +G ARS+LVIHN+
Sbjct: 369 KAAIEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNI 428
Query: 245 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304
+HQG P + L LP ++ + P G+ +N+ I ADRLLTVS
Sbjct: 429 AHQGRGPLDDFSYLDLPVDYMDLFKLYDPF--------GGDHLNIFAAGIKAADRLLTVS 480
Query: 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL 360
GY+WE+ T EGG+GLH I++ GI NGID T+WNP D H+ S +YS++ +
Sbjct: 481 HGYAWELKTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETV 540
Query: 361 -SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGS 419
+GK QCK ALQKELGLP+R D P+I FIGRLD+QKG+DLI A P I D+Q +MLG+
Sbjct: 541 QAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGT 600
Query: 420 GDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY 479
G E +R E+ + D+ RGWVGF++ ++HR+TAG DILLMPSRFEPCGLNQLYAM Y
Sbjct: 601 GRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMY 660
Query: 480 GTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSS 539
GT+PVVHA GGLRDTVE++NP+ G GW+F ++ AL + TYR +++S
Sbjct: 661 GTVPVVHAVGGLRDTVEHYNPYEE----SGLGWTFEKAEANRLIDALGHCLNTYRNYRTS 716
Query: 540 WEGLMRRGMEKDYTWENAAIQYEQVF 565
WEGL +RGM +D +W+NAA YE+V
Sbjct: 717 WEGLQKRGMMQDLSWDNAAKLYEEVL 742
|
May be involved in starch synthesis in endosperm amyloplasts and contribute to the deposition of transient starch in chloroplasts of leaves. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
| >sp|Q6Z2T8|SSY22_ORYSJ Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/506 (49%), Positives = 319/506 (63%), Gaps = 29/506 (5%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
N++ V +E +P+ KTGGLGDV G+LP ALA RGHRVMVV PRY + AKDLG
Sbjct: 204 NVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRY-------GEYAEAKDLG 256
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDINGAFGDNQFRYTLLC 185
+ G + E+++FH + +GVD+VF++ P + HR + YG G D R L C
Sbjct: 257 VRKRYRVAGQDSEVSYFHAFIDGVDFVFLEAPPFRHRHNDIYG---GERFDVLKRMILFC 313
Query: 186 YAACEAPLVLPLGGFTYGE-KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 244
AA E P P GG YG+ +F+ NDWH L+PV L + YR +G+ + RS+LVIHN+
Sbjct: 314 KAAVEVPWFAPCGGSIYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSVLVIHNI 373
Query: 245 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304
+HQG P + + LP + P GE NV + ADR +TVS
Sbjct: 374 AHQGRGPVDDFATMDLPEHYIDHFRLYDPV--------GGEHSNVFAAGLKMADRAVTVS 425
Query: 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL 360
GY WEI T++GG+GLHEI++ L GI NGID+ EWNP DEH+ S +Y+ + L
Sbjct: 426 HGYLWEIKTMDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETL 485
Query: 361 -SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGS 419
+GK QCK ALQ++LGL +R D PLIGFIGRLD+QKG+D+I A P I D+Q VMLG+
Sbjct: 486 DTGKKQCKEALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGT 545
Query: 420 GDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY 479
G P E +R E+ + DK RGWVGF+V ++HRITAG D+LLMPSRFEPCGLNQLYAM Y
Sbjct: 546 GRPDLEEMLRRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAY 605
Query: 480 GTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSS 539
GT+PVVHA GGLRDTV F+PFA G GW+F M+ AL + TYR +K S
Sbjct: 606 GTVPVVHAVGGLRDTVAPFDPFAD----TGLGWTFDRAEANRMIDALGHCLNTYRNYKES 661
Query: 540 WEGLMRRGMEKDYTWENAAIQYEQVF 565
W GL RGM +D +W++AA YE V
Sbjct: 662 WRGLQARGMAQDLSWDHAAELYEDVL 687
|
May contribute to the deposition of transient starch in chloroplasts of leaves. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 576 | ||||||
| 224135151 | 649 | predicted protein [Populus trichocarpa] | 0.949 | 0.842 | 0.811 | 0.0 | |
| 157169067 | 633 | starch synthase isoform I [Manihot escul | 0.935 | 0.851 | 0.784 | 0.0 | |
| 356509243 | 651 | PREDICTED: soluble starch synthase, chlo | 0.946 | 0.837 | 0.765 | 0.0 | |
| 225455364 | 633 | PREDICTED: soluble starch synthase, chlo | 0.937 | 0.853 | 0.783 | 0.0 | |
| 302143910 | 568 | unnamed protein product [Vitis vinifera] | 0.937 | 0.950 | 0.783 | 0.0 | |
| 357463955 | 655 | Soluble starch synthase [Medicago trunca | 0.913 | 0.803 | 0.794 | 0.0 | |
| 297808439 | 655 | hypothetical protein ARALYDRAFT_489289 [ | 0.937 | 0.824 | 0.769 | 0.0 | |
| 47077341 | 645 | starch synthase I precursor [Phaseolus v | 0.946 | 0.844 | 0.760 | 0.0 | |
| 15237934 | 652 | soluble starch synthase [Arabidopsis tha | 0.902 | 0.797 | 0.790 | 0.0 | |
| 6690399 | 575 | soluble starch synthase [Arabidopsis tha | 0.902 | 0.904 | 0.788 | 0.0 |
| >gi|224135151|ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|222868992|gb|EEF06123.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/547 (81%), Positives = 498/547 (91%)
Query: 30 LRVYHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCG 89
+ + V++S +D G ++ ED+EG +K QTRV+YNIVFVT+EAAPYSKTGGLGDVCG
Sbjct: 103 MDISFTVLESHEDATTGGTEEAEDIEGVEKVQTRVTYNIVFVTSEAAPYSKTGGLGDVCG 162
Query: 90 SLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREG 149
SLP+ LAARGHRVMVVSPRY +G+ AD+NF A +L C +K+ CFGGEQE+AFFHEYREG
Sbjct: 163 SLPIVLAARGHRVMVVSPRYLHGSPADKNFAGASELDCHIKVYCFGGEQEVAFFHEYREG 222
Query: 150 VDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFL 209
VDWVFVDHPSYHRPGNPYGD GAFGDNQFR+ LLC+AACEAPLVLPLGG+TYGEKC+FL
Sbjct: 223 VDWVFVDHPSYHRPGNPYGDSRGAFGDNQFRFALLCHAACEAPLVLPLGGYTYGEKCLFL 282
Query: 210 VNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALE 269
VNDWHAGLVPVLLASKYRP+GVYKDAR+ILVIHNL+HQGVEPAATY NLGLPSEWYGAL
Sbjct: 283 VNDWHAGLVPVLLASKYRPYGVYKDARTILVIHNLAHQGVEPAATYTNLGLPSEWYGALG 342
Query: 270 WVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKS 329
WVFPTWARTHALDTGEAVN+LKGAIVT DR+LTVSKGY+WEITTVEGGYGLHE+LSSR+S
Sbjct: 343 WVFPTWARTHALDTGEAVNLLKGAIVTVDRILTVSKGYAWEITTVEGGYGLHELLSSRRS 402
Query: 330 VLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIG 389
VLNGITNGIDI EWNPSSD+HIAS+YS+DDLSGKVQCKIALQKELGLPI+PDCPLIGFIG
Sbjct: 403 VLNGITNGIDIYEWNPSSDKHIASNYSVDDLSGKVQCKIALQKELGLPIKPDCPLIGFIG 462
Query: 390 RLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPI 449
RLDYQKGIDLIR A PE+L DD+QFVMLGSGDP +E WMR TE+TYKDK+RGWVGFN+PI
Sbjct: 463 RLDYQKGIDLIRWATPELLEDDVQFVMLGSGDPLYEDWMRATESTYKDKFRGWVGFNIPI 522
Query: 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEG 509
SH+ITAG DILLMPSRFEPCGLNQLYAMRYGT+PVVH TGGLRDTV+ F+P+++ G GEG
Sbjct: 523 SHKITAGADILLMPSRFEPCGLNQLYAMRYGTVPVVHGTGGLRDTVQAFDPYSKGGLGEG 582
Query: 510 TGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWAS 569
TGW F PLS+ESML ALR AI TYR+HKSSWEG+M+RGM KD TWENAA+ YEQVFEWA
Sbjct: 583 TGWIFSPLSKESMLAALRVAIMTYRDHKSSWEGIMKRGMVKDSTWENAAVHYEQVFEWAF 642
Query: 570 IDPPYIH 576
IDPPYI+
Sbjct: 643 IDPPYIN 649
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157169067|gb|ABV25893.1| starch synthase isoform I [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/539 (78%), Positives = 482/539 (89%)
Query: 37 IDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALA 96
I+S +D+ ++ E+ EG ++AQ R NIVFV AEAAPYSKTGGLGDVCGSLP+ LA
Sbjct: 94 IESHEDVATEIAEETENTEGREEAQVRERLNIVFVAAEAAPYSKTGGLGDVCGSLPIVLA 153
Query: 97 ARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVD 156
ARGHRVMVVSPRY + D+ F A DL +K+ CFGG Q+++FFHEYREGVDWVFVD
Sbjct: 154 ARGHRVMVVSPRYLHFIHQDKVFANALDLDRHIKVHCFGGAQDVSFFHEYREGVDWVFVD 213
Query: 157 HPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG 216
HPSYHRPGNPYGD GAFGDNQFR+TLLC+AACEAPLVLPLGG+TYGEKC+FL NDWHAG
Sbjct: 214 HPSYHRPGNPYGDSRGAFGDNQFRFTLLCHAACEAPLVLPLGGYTYGEKCLFLANDWHAG 273
Query: 217 LVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWA 276
LVPVLLA+KYRPHGVYKDAR +LVIHNL+HQGVEPA TYKN GLPSEWYGALEWVFP WA
Sbjct: 274 LVPVLLAAKYRPHGVYKDARCLLVIHNLAHQGVEPAVTYKNFGLPSEWYGALEWVFPNWA 333
Query: 277 RTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN 336
R HALD GEAVNVLKGAIVTADR+LTVSKGY+WE+TTVEGGYGLHE+LSSR+SVL+GITN
Sbjct: 334 RAHALDKGEAVNVLKGAIVTADRILTVSKGYAWEVTTVEGGYGLHELLSSRRSVLDGITN 393
Query: 337 GIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKG 396
GID++EW+PS+DEHIA+HYS+DDLSGKVQCKIALQKELGLPIRP CPLIGFIGRLDYQKG
Sbjct: 394 GIDVSEWDPSADEHIAAHYSVDDLSGKVQCKIALQKELGLPIRPMCPLIGFIGRLDYQKG 453
Query: 397 IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 456
IDLIR A PE++ DD+QFVMLGSGDP +E WMR TE++Y+DK+RGWVGFNVPISHRITAG
Sbjct: 454 IDLIRWAIPELMEDDVQFVMLGSGDPLYEEWMRVTESSYRDKFRGWVGFNVPISHRITAG 513
Query: 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP 516
CDILLMPSRFEP GLNQL+AMRYGT+PVVH+TGGLRDTV+ FNP+A G EGTGW+F P
Sbjct: 514 CDILLMPSRFEPRGLNQLFAMRYGTVPVVHSTGGLRDTVQTFNPYADGGIDEGTGWTFSP 573
Query: 517 LSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYI 575
LS++SMLTA+R A++TYR++KSSWEG+M+RGME+D TWENAAI YEQVFEWA ID PYI
Sbjct: 574 LSKDSMLTAIRLAVKTYRDYKSSWEGIMKRGMERDNTWENAAIHYEQVFEWAFIDSPYI 632
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356509243|ref|XP_003523360.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/546 (76%), Positives = 475/546 (86%), Gaps = 1/546 (0%)
Query: 29 LLRVYHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVC 88
+ V H + + D K+ED E E++A+TRVS+NIV VT+EAAPYSKTGGL DVC
Sbjct: 106 FMNVSHSITEEDSSSDEVEKPKVEDTE-EEEAKTRVSHNIVVVTSEAAPYSKTGGLADVC 164
Query: 89 GSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYRE 148
GSLP+ALA+RGHRVMVV+PRY +GT+ D F A DL K+ CFGG QEI F+HEYRE
Sbjct: 165 GSLPIALASRGHRVMVVTPRYIHGTSEDLKFAGAVDLDQSTKVFCFGGAQEIGFYHEYRE 224
Query: 149 GVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIF 208
GVDWVFVDHPS+HRPGNPYGD G FGDNQFR+TLLC+AACEAPLVLPLGGF+YGEKC+F
Sbjct: 225 GVDWVFVDHPSFHRPGNPYGDKFGTFGDNQFRFTLLCHAACEAPLVLPLGGFSYGEKCLF 284
Query: 209 LVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGAL 268
L NDWHA LVP+LLA+KYRPHGVYKDARSILVIHN++HQGVEPA TY+NLGLPSEWYGAL
Sbjct: 285 LANDWHASLVPILLAAKYRPHGVYKDARSILVIHNIAHQGVEPAITYRNLGLPSEWYGAL 344
Query: 269 EWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRK 328
EWVFPTWARTHALDTGEAVN LKGA+VTADR++TVSKGYSWEITT EGG GLH++LSSRK
Sbjct: 345 EWVFPTWARTHALDTGEAVNFLKGAVVTADRIVTVSKGYSWEITTSEGGCGLHDLLSSRK 404
Query: 329 SVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFI 388
S+L+GITNGID+TEW+PS D+HIA +YS DDLSGK +CKI+LQKELGLP+RPDCP+IGFI
Sbjct: 405 SILSGITNGIDVTEWDPSCDKHIACNYSADDLSGKAECKISLQKELGLPMRPDCPMIGFI 464
Query: 389 GRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVP 448
GRLDYQKGIDLIRLA PE++ D+QFVMLGSG+P +E WMR TE+ YKDK+RGWVGFNVP
Sbjct: 465 GRLDYQKGIDLIRLAMPELMEADVQFVMLGSGNPIYEDWMRATESIYKDKFRGWVGFNVP 524
Query: 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGE 508
ISH+ITAGCDILLMPS FEPCGLNQLYAMRYGTIPVVH TGGLRDTV NFNP+A E E
Sbjct: 525 ISHKITAGCDILLMPSAFEPCGLNQLYAMRYGTIPVVHETGGLRDTVHNFNPYAEESRAE 584
Query: 509 GTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWA 568
TGW+F PL++ESML ALR+AI+TY E+KSSWEGLM RGM +DYTW NAA QYEQV EWA
Sbjct: 585 STGWTFSPLTKESMLAALRYAIQTYNEYKSSWEGLMIRGMTRDYTWVNAATQYEQVIEWA 644
Query: 569 SIDPPY 574
DPPY
Sbjct: 645 FTDPPY 650
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455364|ref|XP_002277372.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/540 (78%), Positives = 484/540 (89%)
Query: 36 VIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVAL 95
VID + + + + EGE++ +T+V+YNIVFVT+E+APYSKTGGLGDVCGSLP+AL
Sbjct: 93 VIDPHEKLSTQKEAETGNSEGEEERKTKVTYNIVFVTSESAPYSKTGGLGDVCGSLPIAL 152
Query: 96 AARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFV 155
AA GHRVMVVSPRY NGT +DE F+ A DL +K+ CFGG QE++FFHEYR GVDWVFV
Sbjct: 153 AAHGHRVMVVSPRYQNGTCSDEIFSGASDLEHPIKVHCFGGVQEVSFFHEYRAGVDWVFV 212
Query: 156 DHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA 215
DHPSYHRPGNPYGD GAFGDNQFR+TLLC+AACEAPLVLPLGGFTYGEKC+FLVNDWHA
Sbjct: 213 DHPSYHRPGNPYGDGYGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKCLFLVNDWHA 272
Query: 216 GLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTW 275
LVPVLLA+KYRPHGVYKDAR++LVIHNL+HQGVEPA TY NLGLP EWYGA+EWVFPTW
Sbjct: 273 SLVPVLLAAKYRPHGVYKDARTVLVIHNLAHQGVEPAVTYDNLGLPPEWYGAVEWVFPTW 332
Query: 276 ARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGIT 335
ARTHALDTG+AVN+LKGAIVT DR+LTVSKGY+WE+TT EGGYGLHE+L+SRK+V+NGIT
Sbjct: 333 ARTHALDTGQAVNLLKGAIVTVDRILTVSKGYAWEVTTPEGGYGLHELLTSRKAVINGIT 392
Query: 336 NGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQK 395
NGID++EW+PSSDEHI HYS +DLSGKVQCKIALQKEL LPIRPDCPLIGFIGRLDYQK
Sbjct: 393 NGIDVSEWDPSSDEHIPFHYSAEDLSGKVQCKIALQKELSLPIRPDCPLIGFIGRLDYQK 452
Query: 396 GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 455
GID+IRLA PE++ +D+Q VMLGSG+P+ E WMR E+TY+DK+RGWVGFNVPISHRITA
Sbjct: 453 GIDVIRLATPELMGEDVQLVMLGSGNPEDEEWMRVMESTYRDKFRGWVGFNVPISHRITA 512
Query: 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL 515
CDILLMPSRFEPCGLNQLYAMRYG +PVVH TGGLRDTVENFNP+A GSGEGTGW+F
Sbjct: 513 SCDILLMPSRFEPCGLNQLYAMRYGAVPVVHGTGGLRDTVENFNPYAGGGSGEGTGWTFS 572
Query: 516 PLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYI 575
PLS+++ML ALR AIRTYREHK SWE LM+RGMEKDYTW+ AA++YEQVF+WA IDPPY+
Sbjct: 573 PLSKDTMLAALRVAIRTYREHKPSWERLMKRGMEKDYTWDKAALEYEQVFKWAFIDPPYV 632
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302143910|emb|CBI23015.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/540 (78%), Positives = 484/540 (89%)
Query: 36 VIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVAL 95
VID + + + + EGE++ +T+V+YNIVFVT+E+APYSKTGGLGDVCGSLP+AL
Sbjct: 28 VIDPHEKLSTQKEAETGNSEGEEERKTKVTYNIVFVTSESAPYSKTGGLGDVCGSLPIAL 87
Query: 96 AARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFV 155
AA GHRVMVVSPRY NGT +DE F+ A DL +K+ CFGG QE++FFHEYR GVDWVFV
Sbjct: 88 AAHGHRVMVVSPRYQNGTCSDEIFSGASDLEHPIKVHCFGGVQEVSFFHEYRAGVDWVFV 147
Query: 156 DHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA 215
DHPSYHRPGNPYGD GAFGDNQFR+TLLC+AACEAPLVLPLGGFTYGEKC+FLVNDWHA
Sbjct: 148 DHPSYHRPGNPYGDGYGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKCLFLVNDWHA 207
Query: 216 GLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTW 275
LVPVLLA+KYRPHGVYKDAR++LVIHNL+HQGVEPA TY NLGLP EWYGA+EWVFPTW
Sbjct: 208 SLVPVLLAAKYRPHGVYKDARTVLVIHNLAHQGVEPAVTYDNLGLPPEWYGAVEWVFPTW 267
Query: 276 ARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGIT 335
ARTHALDTG+AVN+LKGAIVT DR+LTVSKGY+WE+TT EGGYGLHE+L+SRK+V+NGIT
Sbjct: 268 ARTHALDTGQAVNLLKGAIVTVDRILTVSKGYAWEVTTPEGGYGLHELLTSRKAVINGIT 327
Query: 336 NGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQK 395
NGID++EW+PSSDEHI HYS +DLSGKVQCKIALQKEL LPIRPDCPLIGFIGRLDYQK
Sbjct: 328 NGIDVSEWDPSSDEHIPFHYSAEDLSGKVQCKIALQKELSLPIRPDCPLIGFIGRLDYQK 387
Query: 396 GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 455
GID+IRLA PE++ +D+Q VMLGSG+P+ E WMR E+TY+DK+RGWVGFNVPISHRITA
Sbjct: 388 GIDVIRLATPELMGEDVQLVMLGSGNPEDEEWMRVMESTYRDKFRGWVGFNVPISHRITA 447
Query: 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL 515
CDILLMPSRFEPCGLNQLYAMRYG +PVVH TGGLRDTVENFNP+A GSGEGTGW+F
Sbjct: 448 SCDILLMPSRFEPCGLNQLYAMRYGAVPVVHGTGGLRDTVENFNPYAGGGSGEGTGWTFS 507
Query: 516 PLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYI 575
PLS+++ML ALR AIRTYREHK SWE LM+RGMEKDYTW+ AA++YEQVF+WA IDPPY+
Sbjct: 508 PLSKDTMLAALRVAIRTYREHKPSWERLMKRGMEKDYTWDKAALEYEQVFKWAFIDPPYV 567
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357463955|ref|XP_003602259.1| Soluble starch synthase [Medicago truncatula] gi|355491307|gb|AES72510.1| Soluble starch synthase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/534 (79%), Positives = 471/534 (88%), Gaps = 8/534 (1%)
Query: 48 VKKIEDVEGED-KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106
V+K E ED KAQT V+ NIVFVT+EAAPYSKTGGL DVCGSLP+ALA RGHRVMV+S
Sbjct: 122 VEKPEIGNAEDEKAQTIVTRNIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVIS 181
Query: 107 PRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNP 166
PRY +GTAAD F+ A DLG + + CFGG QE+ FFHEYREGVDWVFVDHPS+HRPGNP
Sbjct: 182 PRYIHGTAADSKFSGAVDLGSPINVFCFGGAQEVGFFHEYREGVDWVFVDHPSFHRPGNP 241
Query: 167 YGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226
YGD +G F DNQFR+TLL +AACEAPLVLPLGGFTYGEKC+FLVNDWHA LV VLLASKY
Sbjct: 242 YGDKHGTFKDNQFRFTLLSHAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVSVLLASKY 301
Query: 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEA 286
RP+GVYKDARSILVIHN++HQGVEPA TY NLGLP EWYGAL WVFPTWARTHALDTGEA
Sbjct: 302 RPYGVYKDARSILVIHNIAHQGVEPAITYSNLGLPQEWYGALGWVFPTWARTHALDTGEA 361
Query: 287 VNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPS 346
VN LKGAIVTADR++TVSKGYSWEITT EGG+GL EIL RKS+L+GITNGID+TEW+PS
Sbjct: 362 VNFLKGAIVTADRIVTVSKGYSWEITTTEGGFGLQEILRDRKSILSGITNGIDVTEWDPS 421
Query: 347 SDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPE 406
SDEHIAS YS DDLSGKV+CKIALQKELGLP+RPDCP+IGF+GRLDYQKGIDLIR A PE
Sbjct: 422 SDEHIASSYSADDLSGKVKCKIALQKELGLPVRPDCPVIGFVGRLDYQKGIDLIRQAIPE 481
Query: 407 ILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRF 466
++ DD+QFVMLGSG+P +E WMR TE+ YKDK+RGWVGFNVP+SHRITAGCDILLMPS F
Sbjct: 482 LMQDDVQFVMLGSGNPIYEDWMRATESLYKDKFRGWVGFNVPVSHRITAGCDILLMPSTF 541
Query: 467 EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSG------EGTGWSFLPLSEE 520
EPCGLNQLYAMRYGTIPVVH TGGLRDTV+NFNPFA GSG EGTGW+F PL++E
Sbjct: 542 EPCGLNQLYAMRYGTIPVVHETGGLRDTVQNFNPFA-GGSGAEGCNAEGTGWTFSPLTKE 600
Query: 521 SMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPY 574
SML ALR+AI+TY EHKSSWEGLM+RGM +DYTWE AA QYEQ+ EWA +DPPY
Sbjct: 601 SMLVALRYAIQTYNEHKSSWEGLMKRGMTRDYTWEKAAAQYEQIIEWAFMDPPY 654
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297808439|ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arabidopsis lyrata subsp. lyrata] gi|297317940|gb|EFH48362.1| hypothetical protein ARALYDRAFT_489289 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/547 (76%), Positives = 480/547 (87%), Gaps = 7/547 (1%)
Query: 35 EVIDSSKDIDGYGVKKIEDVE------GEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVC 88
E ID + D +GV VE G + V N+VFVT+EAAPYSKTGGLGDVC
Sbjct: 109 EAIDETVMAD-FGVPGNRAVEEGAVEVGIPSGKAEVVNNLVFVTSEAAPYSKTGGLGDVC 167
Query: 89 GSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYRE 148
GSLP+ALA RGHRVMVVSPRY NGTAAD N+ AKDLG + + CFGG QE++F+HEYR+
Sbjct: 168 GSLPIALAGRGHRVMVVSPRYLNGTAADNNYARAKDLGIRITVNCFGGSQEVSFYHEYRD 227
Query: 149 GVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIF 208
GVDWVFVDH SYHRPGNPYGD GAFGDNQFR+TLLC+AACEAPLVLPLGGFTYGEK +F
Sbjct: 228 GVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKSLF 287
Query: 209 LVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGAL 268
LVNDWHAGLVP+LLA+KYRP+GVYKDARSIL+IHNL+HQGVEPAATY NLGLPSEWYGA+
Sbjct: 288 LVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAV 347
Query: 269 EWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRK 328
WVFPTWARTHALDTGEAVNVLKGAIVT+DR++TVS+GY+WEITTVEGGYGL ++LSSRK
Sbjct: 348 GWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEITTVEGGYGLQDLLSSRK 407
Query: 329 SVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFI 388
SV+NGITNGI++ EWNPS+DEHI HYS DD S KV+CK+ALQKELGLPIRP+CP+IGFI
Sbjct: 408 SVINGITNGINVDEWNPSTDEHIPFHYSADDFSEKVKCKMALQKELGLPIRPECPMIGFI 467
Query: 389 GRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVP 448
GRLDYQKGIDLI+ A P+++ DDIQFVMLGSGDP++ESWMR E TY+DK+RGWVGFNVP
Sbjct: 468 GRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVP 527
Query: 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGE 508
ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH TGGLRDTVENFNP+A G+G
Sbjct: 528 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGA 587
Query: 509 GTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWA 568
GTGW F PLS++SM++ALR A TYRE+K SWEGLMRRGM ++Y+WENAA+QYEQVF+W
Sbjct: 588 GTGWVFTPLSKDSMVSALRLAAATYREYKESWEGLMRRGMTRNYSWENAAVQYEQVFQWV 647
Query: 569 SIDPPYI 575
+DPPY+
Sbjct: 648 FMDPPYV 654
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|47077341|dbj|BAD18845.1| starch synthase I precursor [Phaseolus vulgaris] | Back alignment and taxonomy information |
|---|
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/546 (76%), Positives = 471/546 (86%), Gaps = 1/546 (0%)
Query: 29 LLRVYHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVC 88
L+ V H + + D I+D GE++A+TRVS+NI+FVTAEAAPYSKTGGL DVC
Sbjct: 100 LMSVQHAIAEEDSSSDLAKKPGIKDT-GEEEAETRVSHNIIFVTAEAAPYSKTGGLADVC 158
Query: 89 GSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYRE 148
GSLP+ALAARGHRVMVV+PRY +GT+ D F A DL K+ CFGG QE+ FFHEYRE
Sbjct: 159 GSLPIALAARGHRVMVVTPRYIHGTSEDAKFAGAVDLEQRTKVSCFGGAQEVGFFHEYRE 218
Query: 149 GVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIF 208
GVDWVFVDHPS+HRPGNPYGD G FGDNQFR+TLL +AACEAPLVLPLGGFTYGEKC+F
Sbjct: 219 GVDWVFVDHPSFHRPGNPYGDKFGTFGDNQFRFTLLSHAACEAPLVLPLGGFTYGEKCLF 278
Query: 209 LVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGAL 268
L NDWHA LVPVLLA+KYRPHGVY+DARSILVIHN++HQGVEPA TY +LGLP+EWYGAL
Sbjct: 279 LANDWHASLVPVLLAAKYRPHGVYRDARSILVIHNIAHQGVEPAITYSSLGLPTEWYGAL 338
Query: 269 EWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRK 328
EWVFPTWARTHALDTGEAVN LKGA+VTADR++TVSKGYSWEITT EGG GLHE+L+ RK
Sbjct: 339 EWVFPTWARTHALDTGEAVNFLKGAVVTADRIVTVSKGYSWEITTSEGGNGLHELLNGRK 398
Query: 329 SVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFI 388
S+L+GITNGID+TEW+PS D+HIA +YS DDLSGK +CK ALQKELGLP+R DCPLIGFI
Sbjct: 399 SILSGITNGIDVTEWDPSCDKHIAFNYSADDLSGKAKCKYALQKELGLPVRSDCPLIGFI 458
Query: 389 GRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVP 448
GRLDYQKGIDLIRLA PE++ D+QFVMLGSG+P +E WMR TE+ Y+DK+RGWVGFNVP
Sbjct: 459 GRLDYQKGIDLIRLAMPELMEADVQFVMLGSGNPIYEDWMRATESVYRDKFRGWVGFNVP 518
Query: 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGE 508
ISH+ITAGCDILLMPS FEPCGLNQLYAMRYGTIPVVH TGGLRDTV NF+P+ + E
Sbjct: 519 ISHKITAGCDILLMPSAFEPCGLNQLYAMRYGTIPVVHETGGLRDTVHNFSPYTEDSKAE 578
Query: 509 GTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWA 568
TGW+F PL++ESMLTALR+AI+TY EHKSSWEGLM RGM KDYTW NAA QYEQ+ EWA
Sbjct: 579 STGWTFSPLTKESMLTALRYAIQTYNEHKSSWEGLMLRGMTKDYTWVNAATQYEQIIEWA 638
Query: 569 SIDPPY 574
I PPY
Sbjct: 639 FIGPPY 644
|
Source: Phaseolus vulgaris Species: Phaseolus vulgaris Genus: Phaseolus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15237934|ref|NP_197818.1| soluble starch synthase [Arabidopsis thaliana] gi|334187896|ref|NP_001190378.1| soluble starch synthase [Arabidopsis thaliana] gi|29337131|sp|Q9FNF2.1|SSY1_ARATH RecName: Full=Starch synthase 1, chloroplastic/amyloplastic; Short=AtSS1; Short=SSS; AltName: Full=Soluble starch synthase I; Flags: Precursor gi|10177090|dbj|BAB10396.1| soluble starch synthase [Arabidopsis thaliana] gi|22135791|gb|AAM91082.1| AT5g24300/MOP9_12 [Arabidopsis thaliana] gi|110742056|dbj|BAE98960.1| soluble starch synthase [Arabidopsis thaliana] gi|332005899|gb|AED93282.1| soluble starch synthase [Arabidopsis thaliana] gi|332005900|gb|AED93283.1| soluble starch synthase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/520 (79%), Positives = 472/520 (90%)
Query: 56 GEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAA 115
G + V N+VFVT+EAAPYSKTGGLGDVCGSLP+ALA RGHRVMV+SPRY NGTAA
Sbjct: 132 GIPSGKAEVVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAA 191
Query: 116 DENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFG 175
D+N+ AKDLG + + CFGG QE++F+HEYR+GVDWVFVDH SYHRPGNPYGD GAFG
Sbjct: 192 DKNYARAKDLGIRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFG 251
Query: 176 DNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDA 235
DNQFR+TLLC+AACEAPLVLPLGGFTYGEK +FLVNDWHAGLVP+LLA+KYRP+GVYKDA
Sbjct: 252 DNQFRFTLLCHAACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDA 311
Query: 236 RSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV 295
RSIL+IHNL+HQGVEPAATY NLGLPSEWYGA+ WVFPTWARTHALDTGEAVNVLKGAIV
Sbjct: 312 RSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIV 371
Query: 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHY 355
T+DR++TVS+GY+WEITTVEGGYGL ++LSSRKSV+NGITNGI++ EWNPS+DEHI HY
Sbjct: 372 TSDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHY 431
Query: 356 SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFV 415
S DD+S K++CK+ALQKELGLPIRP+CP+IGFIGRLDYQKGIDLI+ A P+++ DDIQFV
Sbjct: 432 SADDVSEKIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFV 491
Query: 416 MLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 475
MLGSGDP++ESWMR E TY+DK+RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY
Sbjct: 492 MLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 551
Query: 476 AMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535
AMRYGTIPVVH TGGLRDTVENFNP+A G+G GTGW F PLS++SM++ALR A TYRE
Sbjct: 552 AMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATYRE 611
Query: 536 HKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYI 575
+K SWEGLMRRGM ++Y+WENAA+QYEQVF+W +DPPY+
Sbjct: 612 YKQSWEGLMRRGMTRNYSWENAAVQYEQVFQWVFMDPPYV 651
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6690399|gb|AAF24126.1|AF121673_1 soluble starch synthase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/520 (78%), Positives = 472/520 (90%)
Query: 56 GEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAA 115
G + V N+VFVT+EAAPYSKTGGLGDVCGSLP+ALA RGHRVMV+SPRY NGTAA
Sbjct: 55 GIPSGKAEVVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAA 114
Query: 116 DENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFG 175
D+N+ AKDLG + + CFGG QE++F+HE+R+GVDWVFVDH SYHRPGNPYGD GAFG
Sbjct: 115 DKNYARAKDLGIRVTVNCFGGSQEVSFYHEHRDGVDWVFVDHKSYHRPGNPYGDSKGAFG 174
Query: 176 DNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDA 235
DNQFR+TLLC+AACEAPLVLPLGGFTYGEK +FLVNDWHAGLVP+LLA+KYRP+GVYKDA
Sbjct: 175 DNQFRFTLLCHAACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDA 234
Query: 236 RSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV 295
RSIL+IHNL+HQGVEPAATY NLGLPSEWYGA+ WVFPTWARTHALDTGEAVNVLKGAIV
Sbjct: 235 RSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIV 294
Query: 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHY 355
T+DR++TVS+GY+WEITTVEGGYGL ++LSSRKSV+NGITNGI++ EWNPS+DEHI HY
Sbjct: 295 TSDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHY 354
Query: 356 SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFV 415
S DD+S K++CK+ALQKELGLPIRP+CP+IGFIGRLDYQKGIDLI+ A P+++ DDIQFV
Sbjct: 355 SADDVSEKIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFV 414
Query: 416 MLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 475
MLGSGDP++ESWMR E TY+DK+RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY
Sbjct: 415 MLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 474
Query: 476 AMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535
AMRYGTIPVVH TGGLRDTVENFNP+A G+G GTGW F PLS++SM++ALR A TYRE
Sbjct: 475 AMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGAGTGWVFTPLSKDSMVSALRLAAATYRE 534
Query: 536 HKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYI 575
+K SWEGLMRRGM ++Y+WENAA+QYEQVF+W +DPPY+
Sbjct: 535 YKQSWEGLMRRGMTRNYSWENAAVQYEQVFQWVFMDPPYV 574
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 576 | ||||||
| TAIR|locus:2169749 | 652 | SS1 "starch synthase 1" [Arabi | 0.902 | 0.797 | 0.790 | 1.3e-242 | |
| TAIR|locus:2102102 | 792 | SS2 "starch synthase 2" [Arabi | 0.826 | 0.601 | 0.518 | 4.4e-132 | |
| TIGR_CMR|GSU_1023 | 501 | GSU_1023 "glycogen synthase" [ | 0.597 | 0.686 | 0.409 | 1.6e-92 | |
| TAIR|locus:2037950 | 610 | GBSS1 "granule bound starch sy | 0.885 | 0.836 | 0.387 | 2.2e-89 | |
| UNIPROTKB|Q42968 | 609 | WAXY "Granule-bound starch syn | 0.842 | 0.796 | 0.4 | 1.6e-88 | |
| TIGR_CMR|GSU_3257 | 484 | GSU_3257 "glycogen synthase" [ | 0.595 | 0.708 | 0.412 | 9.2e-68 | |
| TIGR_CMR|BA_5120 | 476 | BA_5120 "glycogen synthase" [B | 0.590 | 0.714 | 0.394 | 2.5e-65 | |
| TAIR|locus:2141936 | 1040 | SS4 "starch synthase 4" [Arabi | 0.600 | 0.332 | 0.353 | 9.3e-62 | |
| UNIPROTKB|Q9KRB6 | 484 | glgA "Glycogen synthase" [Vibr | 0.689 | 0.820 | 0.330 | 1.1e-57 | |
| TIGR_CMR|VC_1726 | 484 | VC_1726 "glycogen synthase" [V | 0.689 | 0.820 | 0.330 | 1.1e-57 |
| TAIR|locus:2169749 SS1 "starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2338 (828.1 bits), Expect = 1.3e-242, P = 1.3e-242
Identities = 411/520 (79%), Positives = 472/520 (90%)
Query: 56 GEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAA 115
G + V N+VFVT+EAAPYSKTGGLGDVCGSLP+ALA RGHRVMV+SPRY NGTAA
Sbjct: 132 GIPSGKAEVVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAA 191
Query: 116 DENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFG 175
D+N+ AKDLG + + CFGG QE++F+HEYR+GVDWVFVDH SYHRPGNPYGD GAFG
Sbjct: 192 DKNYARAKDLGIRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFG 251
Query: 176 DNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDA 235
DNQFR+TLLC+AACEAPLVLPLGGFTYGEK +FLVNDWHAGLVP+LLA+KYRP+GVYKDA
Sbjct: 252 DNQFRFTLLCHAACEAPLVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDA 311
Query: 236 RSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV 295
RSIL+IHNL+HQGVEPAATY NLGLPSEWYGA+ WVFPTWARTHALDTGEAVNVLKGAIV
Sbjct: 312 RSILIIHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIV 371
Query: 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHY 355
T+DR++TVS+GY+WEITTVEGGYGL ++LSSRKSV+NGITNGI++ EWNPS+DEHI HY
Sbjct: 372 TSDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHY 431
Query: 356 SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFV 415
S DD+S K++CK+ALQKELGLPIRP+CP+IGFIGRLDYQKGIDLI+ A P+++ DDIQFV
Sbjct: 432 SADDVSEKIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFV 491
Query: 416 MLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 475
MLGSGDP++ESWMR E TY+DK+RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY
Sbjct: 492 MLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 551
Query: 476 AMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535
AMRYGTIPVVH TGGLRDTVENFNP+A G+G GTGW F PLS++SM++ALR A TYRE
Sbjct: 552 AMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATYRE 611
Query: 536 HKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYI 575
+K SWEGLMRRGM ++Y+WENAA+QYEQVF+W +DPPY+
Sbjct: 612 YKQSWEGLMRRGMTRNYSWENAAVQYEQVFQWVFMDPPYV 651
|
|
| TAIR|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
Identities = 262/505 (51%), Positives = 331/505 (65%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
N++ V AE AP+SKTGGLGDV G+LP +LA RGHRVMVV PRY A+ + AKDLG
Sbjct: 302 NVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRY-----AE--YAEAKDLG 354
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDINGAFGDNQFRYTLLC 185
+ G + E+ +FH + +GVD+VF+D P + H N YG G D R L C
Sbjct: 355 VRKRYKVAGQDMEVMYFHAFIDGVDFVFIDSPEFRHLSNNIYG---GNRLDILKRMVLFC 411
Query: 186 YAACEAPLVLPLGGFTYGE-KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 244
AA E P +P GG YG+ F+ NDWH L+PV L + YR HG+ K RS+LVIHN+
Sbjct: 412 KAAVEVPWYVPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNI 471
Query: 245 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304
+HQG P + + LPS + + + P GE N+ + ADR+LTVS
Sbjct: 472 AHQGRGPVDDFSYVDLPSHYLDSFKLYDPVG--------GEHFNIFAAGLKAADRVLTVS 523
Query: 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL 360
GYSWE+ T+EGG+GLH I++ GI NGID EWNP D ++ S +YS+++L
Sbjct: 524 HGYSWEVKTLEGGWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENL 583
Query: 361 S-GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGS 419
GK QCK ALQKELGLP+RPD PLIGFIGRLD+QKG+DLI A P +++ D+Q VMLG+
Sbjct: 584 HIGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGT 643
Query: 420 GDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY 479
G P E +R E Y+DK RGWVGF+V +HRITAG DILLMPSRFEPCGLNQLYAM Y
Sbjct: 644 GRPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMNY 703
Query: 480 GTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSS 539
GTIPVVHA GGLRDTV+ F+P+ S G GW+F ++ AL + TYRE+K S
Sbjct: 704 GTIPVVHAVGGLRDTVQQFDPY----SETGLGWTFDSAEAGKLIHALGNCLLTYREYKES 759
Query: 540 WEGLMRRGMEKDYTWENAAIQYEQV 564
WEGL RRGM +D +W+NAA +YE+V
Sbjct: 760 WEGLQRRGMTQDLSWDNAAEKYEEV 784
|
|
| TIGR_CMR|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 710 (255.0 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 147/359 (40%), Positives = 213/359 (59%)
Query: 207 IFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYG 266
+F +DWH VPV L + YR + A S+L +HN+ HQG + LG+ E +
Sbjct: 139 VFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVHNMQHQGNFYPGAMEVLGIGWEHFT 198
Query: 267 ALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSS 326
L L+ N+LKG + A L TVS+GY+ E+ T E G+GL ++ +
Sbjct: 199 FL-----------GLEKDNQTNLLKGGLYHATVLNTVSEGYAREMQTPEYGWGLDGVVRA 247
Query: 327 RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386
R + L GI NG+D EWNP +D HI ++YS DLSGK CK +Q+ GLP R D PL G
Sbjct: 248 RSADLVGILNGVDYEEWNPETDPHIVANYSRSDLSGKKLCKRDVQRFFGLPERDDVPLFG 307
Query: 387 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN 446
+GRL QKGID++ A ILA D+Q VMLG+G+P + D Y +K+ ++G+N
Sbjct: 308 LVGRLVKQKGIDILAEAIHRILALDVQVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYN 367
Query: 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGS 506
+SHRI AG D +MPS FEPCGLNQ+Y++RYGT+P+V ATGGL D+VENF+ E +
Sbjct: 368 NGLSHRIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFD----EQN 423
Query: 507 GEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 565
G G+ F +++ + + + T+ K + L+ M K +TWE++A +YE+++
Sbjct: 424 LTGNGFKFWSHDADALFDTVGWTVHTWYRRKDAMAALIGNAMAKRFTWEDSAARYEELY 482
|
|
| TAIR|locus:2037950 GBSS1 "granule bound starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 209/539 (38%), Positives = 310/539 (57%)
Query: 40 SKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG 99
+K + K+ V+ K +++F+ AE P+SKTGGLGDV G LP ALAARG
Sbjct: 58 AKPVSAKSSKRSSKVKTAGKIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARG 117
Query: 100 HRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS 159
HRVM + PRY + + A D ++I + + FFH Y+ GVD VFVDHP
Sbjct: 118 HRVMTICPRY-------DQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPI 170
Query: 160 Y-----HRPGNP-YGDINGA-FGDNQFRYTLLCYAACEAPLVLPLGG---FT--YGEKCI 207
+ + G+ YG I G + DNQ R++LLC AA EAP VL L F+ YGE +
Sbjct: 171 FLAKVVGKTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVV 230
Query: 208 FLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGA 267
F+ NDWH L+P L S Y+ GVY +A+ + IHN+++QG Y L LP + +
Sbjct: 231 FVANDWHTALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSS 290
Query: 268 LEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWE-ITTVEGGYGLHEILSS 326
+++ + + G +N +K AI+ A R+LTVS Y+ E I+ V+ G LH+ L
Sbjct: 291 FDFM-DGYEKPVK---GRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYL-- 344
Query: 327 RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS-GKVQCKIALQKELGLPIRPDCPLI 385
R ++GI NG+D+ EWNPS+D++I Y I ++ K K ALQ +GLP+ D P+I
Sbjct: 345 RMKTVSGIINGMDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVI 404
Query: 386 GFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF 445
GFIGRL+ QKG D++ A + + ++Q V+LG+G + E+ + + E + K G F
Sbjct: 405 GFIGRLEEQKGSDILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKF 464
Query: 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREG 505
NVP++H ITAG D +++PSRFEPCGL QL+AMRYGT+P+V +TGGL DTV++ G
Sbjct: 465 NVPLAHMITAGADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIG 524
Query: 506 SGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQV 564
P + A+ A+ Y S+ + +++ M++D++W+ A +E+V
Sbjct: 525 RFNVKCEVVDPDDVIATAKAVTRAVAVYGT--SAMQEMVKNCMDQDFSWKGPARLWEKV 581
|
|
| UNIPROTKB|Q42968 WAXY "Granule-bound starch synthase 1, chloroplastic/amyloplastic" [Oryza glaberrima (taxid:4538)] | Back alignment and assigned GO terms |
|---|
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 208/520 (40%), Positives = 290/520 (55%)
Query: 62 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTL 121
T N+VFV AE AP+SKTGGLGDV G LP A+AA GHRVMV+SPRY + +
Sbjct: 79 TGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY-------DQYKD 131
Query: 122 AKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-----HRPGNP-YGDINGA-F 174
A D +I + + FFH Y+ GVD VF+DHPS+ + G YG G +
Sbjct: 132 AWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDY 191
Query: 175 GDNQFRYTLLCYAACEAPLVLPLGG---F--TYGEKCIFLVNDWHAGLVPVLLASKYRPH 229
DNQ R++LLC AA EAP +L L F TYGE +F+ NDWH G + L + Y+P+
Sbjct: 192 KDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPN 251
Query: 230 GVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT---GEA 286
G+Y++A+ IHN+S+QG Y L L + + +++ DT G
Sbjct: 252 GIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFI-------DGYDTPVEGRK 304
Query: 287 VNVLKGAIVTADRLLTVSKGYSWE-ITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNP 345
+N +K I+ ADR+LTVS Y+ E I+ + G L I+ R + + GI NG+D++EW+P
Sbjct: 305 INWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIM--RLTGITGIVNGMDVSEWDP 362
Query: 346 SSDEHIASHYSIDD-LSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAA 404
S D++I + Y + K K ALQ E GLP+ PLI FIGRL+ QKG D++ A
Sbjct: 363 SKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAI 422
Query: 405 PEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464
PE++ +D+Q V+LG+G +FE ++ E Y K R V FN P++H I AG D+L +PS
Sbjct: 423 PELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPS 482
Query: 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLT 524
RFEPCGL QL MRYGT +TGGL DTV G P + +
Sbjct: 483 RFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVNCKVVEPSDVKKVAA 542
Query: 525 ALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQV 564
L+ AI+ ++E ++R M +D +W+ A +E V
Sbjct: 543 TLKRAIKVVGT--PAYEEMVRNCMNQDLSWKGPAKNWENV 580
|
|
| TIGR_CMR|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 148/359 (41%), Positives = 212/359 (59%)
Query: 211 NDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEW 270
+DW L+P++L + + ++ IHNL++QG+ PA GLPS + EW
Sbjct: 137 HDWQTALIPIILRLEAADDPFFARTATVFTIHNLAYQGLFPAPAIAETGLPSALF-TTEW 195
Query: 271 VFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSV 330
L+ +N++KGAI+TAD + TVS+ Y EI T G GL +L+ R
Sbjct: 196 ----------LEYYGQLNLMKGAILTADLITTVSETYRREIMTPTQGCGLEGVLARRGDD 245
Query: 331 LNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGR 390
L GI NGID EWNP++D+ I +YS L+GK K+ LQ+ELG+P P PLIG + R
Sbjct: 246 LFGIVNGIDTDEWNPAADKRIFRNYSARALAGKAADKLELQRELGMPAAPSVPLIGMVSR 305
Query: 391 LDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 450
L QKGIDL+ P + ++QFV+LG+G+ + + + +GFN P++
Sbjct: 306 LAEQKGIDLVLELLPRLAESELQFVLLGTGNACYLERLNSFRSKGAANISINLGFNDPLA 365
Query: 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGT 510
+I AG D+ LMPSRFEPCGL+QL AMRYGT+PVV TGGLRDTV + REG T
Sbjct: 366 PKIYAGSDLFLMPSRFEPCGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPREG----T 421
Query: 511 GWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWAS 569
G++F + ++ A+ A+ YR+ + SW +MRRGM +D +W NAA +YE ++ A+
Sbjct: 422 GFTFEDFTADACWEAIERALAGYRD-RESWRRIMRRGMHRDVSWHNAAGRYETLYRMAA 479
|
|
| TIGR_CMR|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 141/357 (39%), Positives = 212/357 (59%)
Query: 211 NDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEW 270
+DWH +V LL KY+ + +Y+ +++ IHNL QGV P P Y LE
Sbjct: 132 HDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFP---------PEVMYDLLE- 181
Query: 271 VFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSV 330
+ + + L+ VN +KG I+ +D++ VS Y EI G L +L
Sbjct: 182 LGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYNDK 241
Query: 331 LNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGR 390
L+GI NGID + +NP +D +I + Y D L K + K ALQ+ GLP + D P+I + R
Sbjct: 242 LSGIVNGIDTSVYNPETDSYITAQYDADSLYEKNENKRALQRYFGLPEKEDTPIISMVTR 301
Query: 391 LDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 450
L QKG+DL+R EI+ +D+Q ++LGSGD ++E + Y +K + ++GFN ++
Sbjct: 302 LTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELA 361
Query: 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGT 510
H++ AG D+ LMPS FEPCGL QL A+ YGTIP+V TGGL DTV++++ E +GEG
Sbjct: 362 HQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYD----EETGEGN 417
Query: 511 GWSFLPLSEESML-TALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 566
G+SF + ML T LR AI Y + KS WE L+++ M +DY+WE +A+ Y+++++
Sbjct: 418 GFSFTNFNAHDMLHTVLR-AIEFYHD-KSVWEQLVKQAMTEDYSWEKSALAYKKLYK 472
|
|
| TAIR|locus:2141936 SS4 "starch synthase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 525 (189.9 bits), Expect = 9.3e-62, Sum P(2) = 9.3e-62
Identities = 127/359 (35%), Positives = 187/359 (52%)
Query: 211 NDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEW 270
+DW V L Y P G+ AR HN +QG A+ + GL
Sbjct: 677 HDWQTAFVAPLYWDLYAPKGL-DSARICFTCHNFEYQGTASASELGSCGLDVNQLNR--- 732
Query: 271 VFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSV 330
P + H+ +G+ VN +KGAI+ ++ + TVS Y+ E+ T EGG GLH L+
Sbjct: 733 --PDRMQDHS--SGDRVNPVKGAIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHSKK 788
Query: 331 LNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC-PLIGFIG 389
GI NGID WNP++D + + ++ DL GK + K AL+K+LGL PL+G I
Sbjct: 789 FIGILNGIDTDSWNPATDPFLKAQFNAKDLQGKEENKHALRKQLGLSSAESRRPLVGCIT 848
Query: 390 RLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATYK--DKYRGWVGFN 446
RL QKG+ LIR A L QFV+LGS P + E +K D R + ++
Sbjct: 849 RLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPHIQREFEGIEQQFKSHDHVRLLLKYD 908
Query: 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGS 506
+SH I A D+ ++PS FEPCGL Q+ AMRYG+IP+ TGGL D+V + +
Sbjct: 909 EALSHTIYAASDLFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVFDIDDDTIPTQ 968
Query: 507 GEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 565
+ G++F E+ AL A Y++ + W L+ + M D++W ++A QYE+++
Sbjct: 969 FQN-GFTFQTADEQGFNYALERAFNHYKKDEEKWMRLVEKVMSIDFSWGSSATQYEELY 1026
|
|
| UNIPROTKB|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 141/426 (33%), Positives = 230/426 (53%)
Query: 148 EGVDWVFVDHPSYH-RPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKC 206
+GV +D P+Y RP Y + N A+ DN R+ AAC VLP G +
Sbjct: 80 DGVPIYLIDCPAYFDRPAL-YAENNQAYADNGERFGFFS-AACLD--VLPKLGI---QPD 132
Query: 207 IFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLG-LPSEWY 265
I NDWH GLVP LL ++YR ++ +S+L +HN +G+ +Y L +P
Sbjct: 133 IIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGI---FSYHQLEVIPELNL 189
Query: 266 GALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS 325
+E F + H V++L+ I AD++ VS Y+ E+ T G +GL +
Sbjct: 190 SGME--FLQYGHDH-------VSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFV 240
Query: 326 SRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS---GKVQCKIALQKELGLPIRPDC 382
R L+GI NG D +EWNP +D ++ + YS + S GK CK ALQ+EL LP+ D
Sbjct: 241 RRARDLHGIVNGCDYSEWNPRTDHYLPATYSDEPESMRKGKALCKTALQEELHLPVT-DV 299
Query: 383 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW 442
PL G + RL +QKG + + L +++Q V++G+G+P+ + + ++ K+
Sbjct: 300 PLFGMVCRLTHQKGFHYLLPILEQFLRNNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFV 359
Query: 443 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFA 502
++ ++H + AG D LMPS FE CGLNQ+Y+M YGT+P+V GGL+DTV +++ F
Sbjct: 360 ETYSERLAHWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTVNDYDKFP 419
Query: 503 REGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYE 562
TG+ + + E++L ++ A+ Y + + +R M+++++WE +A +Y
Sbjct: 420 ERA----TGFGYQEPTPEALLITMQRALLFYLQQPEEMLKVQQRAMQQNFSWEESAQEYM 475
Query: 563 QVFEWA 568
+++ A
Sbjct: 476 KMYRLA 481
|
|
| TIGR_CMR|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 141/426 (33%), Positives = 230/426 (53%)
Query: 148 EGVDWVFVDHPSYH-RPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKC 206
+GV +D P+Y RP Y + N A+ DN R+ AAC VLP G +
Sbjct: 80 DGVPIYLIDCPAYFDRPAL-YAENNQAYADNGERFGFFS-AACLD--VLPKLGI---QPD 132
Query: 207 IFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLG-LPSEWY 265
I NDWH GLVP LL ++YR ++ +S+L +HN +G+ +Y L +P
Sbjct: 133 IIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGI---FSYHQLEVIPELNL 189
Query: 266 GALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS 325
+E F + H V++L+ I AD++ VS Y+ E+ T G +GL +
Sbjct: 190 SGME--FLQYGHDH-------VSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFV 240
Query: 326 SRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS---GKVQCKIALQKELGLPIRPDC 382
R L+GI NG D +EWNP +D ++ + YS + S GK CK ALQ+EL LP+ D
Sbjct: 241 RRARDLHGIVNGCDYSEWNPRTDHYLPATYSDEPESMRKGKALCKTALQEELHLPVT-DV 299
Query: 383 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW 442
PL G + RL +QKG + + L +++Q V++G+G+P+ + + ++ K+
Sbjct: 300 PLFGMVCRLTHQKGFHYLLPILEQFLRNNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFV 359
Query: 443 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFA 502
++ ++H + AG D LMPS FE CGLNQ+Y+M YGT+P+V GGL+DTV +++ F
Sbjct: 360 ETYSERLAHWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTVNDYDKFP 419
Query: 503 REGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYE 562
TG+ + + E++L ++ A+ Y + + +R M+++++WE +A +Y
Sbjct: 420 ERA----TGFGYQEPTPEALLITMQRALLFYLQQPEEMLKVQQRAMQQNFSWEESAQEYM 475
Query: 563 QVFEWA 568
+++ A
Sbjct: 476 KMYRLA 481
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A7H6L1 | GLGA_ANADF | 2, ., 4, ., 1, ., 2, 1 | 0.428 | 0.8142 | 0.9873 | yes | no |
| Q9FNF2 | SSY1_ARATH | 2, ., 4, ., 1, ., 2, 1 | 0.7903 | 0.9027 | 0.7975 | yes | no |
| B7GK04 | GLGA_ANOFW | 2, ., 4, ., 1, ., 2, 1 | 0.3564 | 0.8090 | 0.9628 | yes | no |
| Q0DEC8 | SSY1_ORYSJ | 2, ., 4, ., 1, ., 2, 1 | 0.7438 | 0.9114 | 0.8190 | yes | no |
| Q39XS5 | GLGA1_GEOMG | 2, ., 4, ., 1, ., 2, 1 | 0.3872 | 0.8263 | 0.9482 | yes | no |
| Q74ED9 | GLGA1_GEOSL | 2, ., 4, ., 1, ., 2, 1 | 0.3832 | 0.8263 | 0.9500 | yes | no |
| B8J8R4 | GLGA_ANAD2 | 2, ., 4, ., 1, ., 2, 1 | 0.3992 | 0.8142 | 0.9832 | yes | no |
| P93568 | SSY1_SOLTU | 2, ., 4, ., 1, ., 2, 1 | 0.7472 | 0.9305 | 0.8361 | N/A | no |
| Q1ILA0 | GLGA_KORVE | 2, ., 4, ., 1, ., 2, 1 | 0.3781 | 0.8072 | 0.9607 | yes | no |
| C0M712 | GLGA_STRE4 | 2, ., 4, ., 1, ., 2, 1 | 0.3598 | 0.8142 | 0.9852 | yes | no |
| Q43654 | SSY1_WHEAT | 2, ., 4, ., 1, ., 2, 1 | 0.7085 | 0.9461 | 0.8423 | N/A | no |
| A2Y9M4 | SSY1_ORYSI | 2, ., 4, ., 1, ., 2, 1 | 0.7419 | 0.9114 | 0.8190 | N/A | no |
| B4ULD8 | GLGA_ANASK | 2, ., 4, ., 1, ., 2, 1 | 0.4055 | 0.8107 | 0.9831 | yes | no |
| Q2RH55 | GLGA_MOOTA | 2, ., 4, ., 1, ., 2, 1 | 0.3636 | 0.8090 | 0.9568 | yes | no |
| Q2IM81 | GLGA_ANADE | 2, ., 4, ., 1, ., 2, 1 | 0.4051 | 0.8142 | 0.9873 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.21 | 0.991 |
| 4th Layer | 2.4.1.246 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.4.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 576 | |||
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 0.0 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 0.0 | |
| PRK00654 | 466 | PRK00654, glgA, glycogen synthase; Provisional | 1e-177 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 1e-143 | |
| PRK14099 | 485 | PRK14099, PRK14099, glycogen synthase; Provisional | 1e-108 | |
| PRK14098 | 489 | PRK14098, PRK14098, glycogen synthase; Provisional | 7e-88 | |
| pfam08323 | 234 | pfam08323, Glyco_transf_5, Starch synthase catalyt | 9e-74 | |
| PLN02939 | 977 | PLN02939, PLN02939, transferase, transferring glyc | 3e-72 | |
| PLN02316 | 1036 | PLN02316, PLN02316, synthase/transferase | 8e-60 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 6e-19 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 1e-15 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 1e-15 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 2e-14 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 2e-12 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 2e-11 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 1e-10 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-10 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 6e-10 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 8e-09 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 1e-08 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 3e-07 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 7e-07 | |
| TIGR04063 | 397 | TIGR04063, stp3, PEP-CTERM/exosortase A-associated | 1e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 7e-06 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 1e-05 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 3e-05 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 3e-05 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 2e-04 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 3e-04 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 3e-04 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 8e-04 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 0.001 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 592 bits (1530), Expect = 0.0
Identities = 211/501 (42%), Positives = 288/501 (57%), Gaps = 25/501 (4%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
++FV +E AP++KTGGLGDV G+LP ALA GH V V+ P+Y G DE L
Sbjct: 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKY--GRILDELRGQLLVLR 58
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCY 186
+ G + + F +GV F+D+P Y Y D + DN R+ L
Sbjct: 59 LFG-VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSR 117
Query: 187 AACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSH 246
AA E L + I +DWH GLVP LL KY +K+ +++ IHNL++
Sbjct: 118 AALELLRRL------GWKPDIIHCHDWHTGLVPALLKEKYADPF-FKNIKTVFTIHNLAY 170
Query: 247 QGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306
QGV P ++LGLP E L+ VN LK IV AD + TVS
Sbjct: 171 QGVFPLEALEDLGLPWEEL----------FHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220
Query: 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 366
Y+ EI T E G GL +L +R L+GI NGID WNP++D H+ ++YS DDL GK +
Sbjct: 221 YAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAEN 280
Query: 367 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFES 426
K ALQ+ELGLP+ PD PL GF+GRL QKGIDL+ A PE+L Q V+LGSGDP++E
Sbjct: 281 KAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEE 340
Query: 427 WMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 486
+R+ A Y + +G++ ++H I AG D LMPSRFEPCGL Q+YAMRYGT+P+V
Sbjct: 341 ALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVR 400
Query: 487 ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRR 546
ATGGL DTV ++N GEGTG+ F + +++L ALR A+ YR+ +W L R
Sbjct: 401 ATGGLADTVIDYNEDT----GEGTGFVFEGYNADALLAALRRALALYRD-PEAWRKLQRN 455
Query: 547 GMEKDYTWENAAIQYEQVFEW 567
M +D++W+ +A +Y +++
Sbjct: 456 AMAQDFSWDRSAKEYLELYRS 476
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 551 bits (1421), Expect = 0.0
Identities = 215/503 (42%), Positives = 287/503 (57%), Gaps = 36/503 (7%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKD-- 124
++FV AE AP++KTGGL DV G+LP ALAA GH V V+ P Y G DE K
Sbjct: 2 RVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAY--GCIEDEVDDQVKVVE 59
Query: 125 LGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDINGAFGDNQFRYTL 183
L + + F EGV F+D+PS RPG YGD + DN R+
Sbjct: 60 LV---DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDRPGGIYGD---DYPDNAERFAF 113
Query: 184 LCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHN 243
AA E L G+ + +DWH LVP LL + YRP+ +++ IHN
Sbjct: 114 FSRAAAELLSGL---GWQPD---VVHAHDWHTALVPALLKAVYRPN----PIKTVFTIHN 163
Query: 244 LSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303
L++QGV PA + LGLP E++ L+ VN LKG IV ADR+ TV
Sbjct: 164 LAYQGVFPADDFSELGLPPEYFHM-----------EGLEFYGRVNFLKGGIVYADRVTTV 212
Query: 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 363
S Y+ EI T E GYGL +L +R L GI NGID WNP++D ++ ++YS DDL+GK
Sbjct: 213 SPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGK 272
Query: 364 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQ 423
+ K ALQ+ELGLP+ D PL G I RL QKG+DL+ A PE+L Q V+LG+GDP+
Sbjct: 273 AENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPE 332
Query: 424 FESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIP 483
E +R+ Y R +G++ ++H I AG D +LMPSRFEPCGL QLYAMRYGT+P
Sbjct: 333 LEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVP 392
Query: 484 VVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543
+V TGGL DTV + +P A GTG+ F ++L AL A+R YR+ S WE L
Sbjct: 393 IVRRTGGLADTVVDGDPEA----ESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEAL 448
Query: 544 MRRGMEKDYTWENAAIQYEQVFE 566
+ M +D++W+ +A QY +++
Sbjct: 449 QKNAMSQDFSWDKSAKQYVELYR 471
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 507 bits (1308), Expect = e-177
Identities = 202/505 (40%), Positives = 274/505 (54%), Gaps = 50/505 (9%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
I+FV +E AP KTGGLGDV G+LP ALAA GH V V+ P Y + + L
Sbjct: 2 KILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYP---------AIREKLR 52
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS-YHRPGNPYGDINGAFGDNQFRYTLLC 185
+ + E +GV +D P + RP YG + DN R+
Sbjct: 53 DAQVVGRLDLFTVLFGHLEG-DGVPVYLIDAPHLFDRPSG-YG-----YPDNGERFAFFS 105
Query: 186 YAACEAPLVLPLGGFTYGEKC--IFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHN 243
+AA E G + I +DWH GL+P LL KY Y D +++ IHN
Sbjct: 106 WAAAEF-----AEG---LDPRPDIVHAHDWHTGLIPALLKEKYWRG--YPDIKTVFTIHN 155
Query: 244 LSHQGVEPAATYKNLGLPSEWY--GALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 301
L++QG+ PA LGLP+E + LE+ ++ LK + ADR+
Sbjct: 156 LAYQGLFPAEILGELGLPAEAFHLEGLEFYG-------------QISFLKAGLYYADRVT 202
Query: 302 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 361
TVS Y+ EITT E GYGL +L +R L+GI NGID WNP +D +A++YS DDL
Sbjct: 203 TVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLE 262
Query: 362 GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD 421
GK + K ALQ+ GLP D PL + RL QKG+DL+ A PE+L Q V+LG+GD
Sbjct: 263 GKAENKRALQERFGLP-DDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGD 321
Query: 422 PQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT 481
P+ E R A Y K +G++ ++HRI AG D+ LMPSRFEPCGL QLYA+RYGT
Sbjct: 322 PELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGT 381
Query: 482 IPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 541
+P+V TGGL DTV ++NP GE TG+ F + E +L ALR A+ YR W
Sbjct: 382 LPIVRRTGGLADTVIDYNPED----GEATGFVFDDFNAEDLLRALRRALELYR-QPPLWR 436
Query: 542 GLMRRGMEKDYTWENAAIQYEQVFE 566
L R+ M +D++W+ +A +Y +++
Sbjct: 437 ALQRQAMAQDFSWDKSAEEYLELYR 461
|
Length = 466 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 422 bits (1087), Expect = e-143
Identities = 190/513 (37%), Positives = 272/513 (53%), Gaps = 36/513 (7%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY--FNGTAADENFTLAKD 124
I+FV +E P+ KTGGL DV G+LP ALA RG V V+ P Y D + K
Sbjct: 2 KILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKF 61
Query: 125 LGCCMKICCFGGEQEIAFFHEYRE--GVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYT 182
GG ++ EY + GVD +D+P+ P + G + DN R+
Sbjct: 62 GVL------KGGRAQLFIVKEYGKDGGVDLYLIDNPALF--KRPDSTLYG-YYDNAERFA 112
Query: 183 LLCYAACEAPLVLPLGG-FTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVI 241
AA E PLG + I +DW GL+P L +YR ++ I
Sbjct: 113 FFSLAAAEL---APLGLISWLPD--IVHAHDWQTGLLPAYLKQRYR---SGYIIPTVFTI 164
Query: 242 HNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 301
HNL++QG+ + LGLP E Y + L+ ++ LKG + AD +
Sbjct: 165 HNLAYQGLFRLQYLEELGLPFEAYAS-----------FGLEFYGQISFLKGGLYYADAVT 213
Query: 302 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 361
TVS Y+ EI T E G GL +LS R L+GI NGID WNP +D +IA++YS + L
Sbjct: 214 TVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP 273
Query: 362 GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD 421
K + K+ALQ+ LGL + PL GF+ RL QKG+DL+ A E+L Q V+LG+GD
Sbjct: 274 AKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGD 333
Query: 422 PQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT 481
P+ E +R + + + +G++ P++H I AG D++LMPSRFEPCGL QLYAMRYGT
Sbjct: 334 PELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGT 393
Query: 482 IPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 541
+P+V TGGL DTV + N + G GTG+ FL + + + ALR A+ YR W
Sbjct: 394 LPIVRETGGLADTVVDRNEWLI--QGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWR 451
Query: 542 GLMRRGMEKDYTWENAAIQYEQVFEWASIDPPY 574
+ M D++W+ +A +Y ++++ + P+
Sbjct: 452 KVQPNAMGADFSWDLSAKEYVELYKPL-LSKPF 483
|
Length = 487 |
| >gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 333 bits (855), Expect = e-108
Identities = 185/505 (36%), Positives = 245/505 (48%), Gaps = 47/505 (9%)
Query: 71 VTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMK 130
V +E P KTGGL DV G+LP AL A G V + P Y A E+
Sbjct: 9 VASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDL-- 66
Query: 131 ICCFGGEQEIAFFHEYREGVDWVFVDHPS-YHRPGNPYGDINGA-FGDNQFRYTLLCYAA 188
FGG + G+D +D P Y RPGNPY +G + DN R+ L AA
Sbjct: 67 ---FGGPARL--LAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAA 121
Query: 189 CEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQG 248
L + GF I +DW AGL P L RP ++ IHNL+ QG
Sbjct: 122 AAIGQGL-VPGFVPD---IVHAHDWQAGLAPAYLHYSGRPA-----PGTVFTIHNLAFQG 172
Query: 249 VEPAATYKNLGLPS--------EWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRL 300
P LGLP E+YG + LK + ADR+
Sbjct: 173 QFPRELLGALGLPPSAFSLDGVEYYGG-------------------IGYLKAGLQLADRI 213
Query: 301 LTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 360
TVS Y+ EI E G GL +L R L+GI NGID WNP++DE IA+ Y ++ L
Sbjct: 214 TTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL 273
Query: 361 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSG 420
+ + K ALQ GL PD L+G I RL +QKG+DL+ A P +L + Q +LGSG
Sbjct: 274 AARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSG 333
Query: 421 DPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYG 480
D + E+ R Y + +G++ ++H I AG D LL+PSRFEPCGL QL A+RYG
Sbjct: 334 DAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG 393
Query: 481 TIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSW 540
+PVV GGL DTV + N A +G TG F P++ +++ ALR + + +W
Sbjct: 394 AVPVVARVGGLADTVVDANEMAIA-TGVATGVQFSPVTADALAAALRKTAALFADP-VAW 451
Query: 541 EGLMRRGMEKDYTWENAAIQYEQVF 565
L R GM D +W N A Y ++
Sbjct: 452 RRLQRNGMTTDVSWRNPAQHYAALY 476
|
Length = 485 |
| >gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional | Back alignment and domain information |
|---|
Score = 280 bits (717), Expect = 7e-88
Identities = 131/356 (36%), Positives = 202/356 (56%), Gaps = 21/356 (5%)
Query: 211 NDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEW 270
+DW+AGLVP+LL + Y H +KD +++L IHN+ QGV P ++ L LP E L
Sbjct: 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLHR 206
Query: 271 VFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITT-VEGGYGLHEILSSRKS 329
G+ VN+L + AD L T S Y+ EI E +GL ++L RK
Sbjct: 207 E------------GDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKM 254
Query: 330 VLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIG 389
L+GI NGID +WNPS+D+ I YSI+ L GK++ K AL +E+GLP + PL+G I
Sbjct: 255 RLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVII 314
Query: 390 RLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPI 449
D +G +L+ + +++ DIQ V+ GSGD ++E +D + ++ F
Sbjct: 315 NFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAF 374
Query: 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEG 509
H AG D+LLMP + E CG+ Q++AM YGTIPV +A GG+ +T+E +G
Sbjct: 375 FHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEV------SEDKG 428
Query: 510 TGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 565
+G+ F + E+++ L A+ Y + + WE L+ ME+D++W+N+A +Y Q++
Sbjct: 429 SGFIFHDYTPEALVAKLGEALALYHD-EERWEELVLEAMERDFSWKNSAEEYAQLY 483
|
Length = 489 |
| >gnl|CDD|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain | Back alignment and domain information |
|---|
Score = 234 bits (600), Expect = 9e-74
Identities = 89/257 (34%), Positives = 118/257 (45%), Gaps = 25/257 (9%)
Query: 68 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGC 127
I+FV +E AP++KTGGL DV G+LP ALA GH V V+ PRY + +L
Sbjct: 1 ILFVASECAPFAKTGGLADVVGALPKALAKLGHDVRVIMPRYGFIPEERKQLEEVIELY- 59
Query: 128 CMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYA 187
+ +GVD F+D+P Y YGD + DN R+ A
Sbjct: 60 -------VLFGYVGVARLELDGVDVYFLDNPEYFDRPGIYGDAGRDYEDNAERFAFFSRA 112
Query: 188 ACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQ 247
A E L + I +DWH GLVP L Y +K+ +++ IHNL++Q
Sbjct: 113 ALELLRKLG-----WKPDIIHC-HDWHTGLVPAYLKEAYADDPFFKNIKTVFTIHNLAYQ 166
Query: 248 GVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGY 307
GV PA LGLP E + L+ +N LK IV AD + TVS Y
Sbjct: 167 GVFPADLLDLLGLPWEDF-----------SIDGLEFYGQINFLKAGIVYADAVTTVSPTY 215
Query: 308 SWEITTVEGGYGLHEIL 324
+ EI T E G GL +L
Sbjct: 216 AEEILTPEFGEGLDGLL 232
|
Length = 234 |
| >gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 249 bits (636), Expect = 3e-72
Identities = 175/521 (33%), Positives = 261/521 (50%), Gaps = 45/521 (8%)
Query: 62 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTL 121
T +IV + AE AP +K GGL DV L AL +GH V +V P+Y + D+ L
Sbjct: 478 TSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKY-DCMQYDQIRNL 536
Query: 122 AKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVD--HPS-YHRPGNPYGDINGAFGDNQ 178
K L ++ G + + EG+ F++ HPS + YG+ D+
Sbjct: 537 -KVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGE-----HDDF 590
Query: 179 FRYTLLCYAACEAPLVLPLGGFTYGEKC-IFLVNDWHAGLVPVLLASKYRPHGVYKDARS 237
R++ AA E L+ G+K I +DW V L Y P G + AR
Sbjct: 591 KRFSYFSRAALE--LLY-----QSGKKPDIIHCHDWQTAFVAPLYWDLYAPKG-FNSARI 642
Query: 238 ILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297
HN +QG PA+ + GL P + +A +NV+KGAIV +
Sbjct: 643 CFTCHNFEYQGTAPASDLASCGLDVHQLDR-----PDRMQDNAHGR---INVVKGAIVYS 694
Query: 298 DRLLTVSKGYSWEITTVEGGYGLHEILS--SRKSVLNGITNGIDITEWNPSSDEHIASHY 355
+ + TVS Y+ E+ + EGG GL + L S+K V GI NGID WNPS+D + Y
Sbjct: 695 NIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFV--GILNGIDTDTWNPSTDRFLKVQY 751
Query: 356 SIDDLSGKVQCKIALQKELGLP-IRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQF 414
+ +DL GK K AL+K+LGL PL+G I RL QKG+ LIR A + QF
Sbjct: 752 NANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQF 811
Query: 415 VMLGSGD-PQFESWMRDTEATYK--DKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGL 471
V+LGS P + ++ + R + ++ +SH I A D+ ++PS FEPCGL
Sbjct: 812 VLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGL 871
Query: 472 NQLYAMRYGTIPVVHATGGLRDTVENFN----PFAREGSGEGTGWSFLPLSEESMLTALR 527
Q+ AMRYG++P+V TGGL D+V +F+ P G++FL E+ + +AL
Sbjct: 872 TQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELR-----NGFTFLTPDEQGLNSALE 926
Query: 528 FAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWA 568
A Y+ W+ L+++ M D++W+++A QYE++++ A
Sbjct: 927 RAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRA 967
|
Length = 977 |
| >gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase | Back alignment and domain information |
|---|
Score = 214 bits (547), Expect = 8e-60
Identities = 166/516 (32%), Positives = 241/516 (46%), Gaps = 82/516 (15%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAAD-ENFTLAKDL 125
+IV + E AP +K GGLGDV SL A+ H V ++ P+Y D N + KDL
Sbjct: 589 HIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKY------DCLNLSHVKDL 642
Query: 126 GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPY---GDINGAFGDNQFRYT 182
+ G EI + EG+ F++ P N G + G D + R+
Sbjct: 643 H--YQRSYSWGGTEIKVWFGKVEGLSVYFLE------PQNGMFWAGCVYGCRNDGE-RFG 693
Query: 183 LLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIH 242
C+AA E L GF I +DW + V L Y +G+ K AR + IH
Sbjct: 694 FFCHAALE---FLLQSGFH---PDIIHCHDWSSAPVAWLFKDHYAHYGLSK-ARVVFTIH 746
Query: 243 NLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302
NL +GA N + A+ AD+ T
Sbjct: 747 NLE-------------------FGA--------------------NHIGKAMAYADKATT 767
Query: 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD-LS 361
VS YS E++ + ++ +GI NGID W+P +D I Y+ ++ +
Sbjct: 768 VSPTYSREVSG-------NSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVE 820
Query: 362 GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSG- 420
GK K ALQ+ LGL + D PL+G I RL +QKGI LI+ A L + Q V+LGS
Sbjct: 821 GKRAAKEALQQRLGLK-QADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAP 879
Query: 421 DPQ----FESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYA 476
DP+ F + +++ D+ R + ++ P+SH I AG D +L+PS FEPCGL QL A
Sbjct: 880 DPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTA 939
Query: 477 MRYGTIPVVHATGGLRDT---VENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533
MRYG+IPVV TGGL DT V++ A+ E G+SF + AL AI +
Sbjct: 940 MRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAW 999
Query: 534 REHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWAS 569
+ + + L +R ME+D++W A+ Y +++ A
Sbjct: 1000 YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035
|
Length = 1036 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 6e-19
Identities = 78/370 (21%), Positives = 132/370 (35%), Gaps = 99/370 (26%)
Query: 210 VNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALE 269
+DW A L L A +L +H G+E LGL + ALE
Sbjct: 91 AHDWLALLAAALAARLLG-------IPLVLTVH-----GLEFGRPGNELGLLLKLARALE 138
Query: 270 WVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKS 329
A+ ADR++ VS+ + G+ + +
Sbjct: 139 RR---------------------ALRRADRIIAVSE---ATREELRELGGVPP---EKIT 171
Query: 330 VLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIG 389
V I NG+D + P+ L I D P+I F+G
Sbjct: 172 V---IPNGVDTERFRPAPRAARRR----------------------LGIPEDEPVILFVG 206
Query: 390 RLDYQKGID-LIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATYKDKYRG----- 441
RL +KG+D L+ A ++ + D++ V++G G +R+ +
Sbjct: 207 RLVPRKGVDLLLE-ALAKLRKEYPDVRLVIVGDGP------LREELEALAAELGLGDRVT 259
Query: 442 WVGFNVPIS--HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFN 499
++GF VP + A D+ ++PS +E GL L AM G V GG+ + VE+
Sbjct: 260 FLGF-VPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVED-- 316
Query: 500 PFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWEN 556
TG P E++ A+ + + L + + ++W+
Sbjct: 317 --------GETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDR 364
Query: 557 AAIQYEQVFE 566
A + E+V+
Sbjct: 365 VAARTEEVYY 374
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 1e-15
Identities = 67/280 (23%), Positives = 110/280 (39%), Gaps = 63/280 (22%)
Query: 297 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYS 356
AD ++ VS+ + G + +V I NG+D ++P+
Sbjct: 149 ADAVIAVSE-ALADELKALGIDP------EKVTV---IPNGVDTERFSPADR-------- 190
Query: 357 IDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEILA--DDIQ 413
A ++LGLP D +I F+GRL +KGID LI A +L D+
Sbjct: 191 ------------AEARKLGLP--EDKKVILFVGRLVPRKGIDYLIE-ALARLLKKRPDVH 235
Query: 414 FVMLGSGDPQFESWMRDTEATYKDKYR--GWVGFNVPISHRITAGCDILLMPSRFEPCGL 471
V++G G + E +D+ G V + + A D+ ++PS E GL
Sbjct: 236 LVIVGDGPLREALEALAAELGLEDRVTFLGAVP-HEEVPAYYAA-ADVFVLPSLREGFGL 293
Query: 472 NQLYAMRYGTIPVVHAT--GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529
L AM G PVV AT GG+ + + + G P E++ A+
Sbjct: 294 VLLEAMACGL-PVV-ATDVGGIPEIITD----------GENGLLVPPGDPEALAEAILRL 341
Query: 530 IRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFE 566
+ W L R + + ++WEN A + +++
Sbjct: 342 L------ADPWLRLGRAARRRVAERFSWENVAERLLELYR 375
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 78.5 bits (192), Expect = 1e-15
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 372 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGD---PQFES 426
+GL ++ ++GRLD +KG+DL+ AA ++ DI+ V++G G + E
Sbjct: 189 ARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEK 248
Query: 427 WMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 486
+ K+ G+V + A D+ ++PS E GL L AM GT +
Sbjct: 249 LAKKLGLEDNVKFLGYVPDEELA--ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIAS 306
Query: 487 ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRR 546
GG+ + VE+ TG P E + AL + E E L
Sbjct: 307 DVGGIPEVVED----------GETGLLVPPGDVEELADALEQLL----EDPELREELGEA 352
Query: 547 GME---KDYTWENAAIQYEQVFE 566
E ++++WE A Q +++E
Sbjct: 353 ARERVEEEFSWERIAEQLLELYE 375
|
Length = 381 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 2e-14
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 383 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYR 440
P+I F+GRL +KG+DL+ A + +++ V++G G+ + + + +D
Sbjct: 3 PIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDN-V 61
Query: 441 GWVGF--NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENF 498
+VGF + + D+ ++PSR+E GL L AM G + GG + V++
Sbjct: 62 IFVGFVPDEDLIELYRI-ADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIVKDG 120
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 2e-12
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 387 FIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 444
F+GRL +KG+D + A + D++ V+ G G + E A ++G
Sbjct: 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPER-EYLEELLAALLLLDRVIFLG 167
Query: 445 FNVPIS--HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497
P + A D+ ++PS E GL L AM G + GG + VE+
Sbjct: 168 GLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVED 222
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 65.6 bits (161), Expect = 2e-11
Identities = 63/211 (29%), Positives = 84/211 (39%), Gaps = 47/211 (22%)
Query: 375 GLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEI--LADDIQFVMLG--SGDP------Q 423
L PD P I +GRLD +KGID LIR A E+ L + V++G D +
Sbjct: 213 RLLRDPDKPRILAVGRLDPRKGIDTLIR-AYAELPELRERANLVIVGGPRDDILAMDEEE 271
Query: 424 FESWMRDTEATYKDKYRGWVGFNVPISH----RITAGCDILLMPSRFEPCGLNQLYAMRY 479
R+ D+ F +S + D+ + P+ +EP GL L AM
Sbjct: 272 LRELARELGVI--DRVD----FPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMAC 325
Query: 480 GTIPVVHAT--GGLRDTVENFNPFAREGSGEGTGWSFL--PLSEESMLTALRFAIRTYRE 535
G PVV AT GG RD V + TG L P E AL A+R
Sbjct: 326 GL-PVV-ATAVGGPRDIVVD----------GVTG--LLVDPRDPE----ALAAALRRLLT 367
Query: 536 HKSSWEGLMRRGME---KDYTWENAAIQYEQ 563
+ L R G+ YTWE A + +
Sbjct: 368 DPALRRRLSRAGLRRARARYTWERVAARLLE 398
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.3 bits (155), Expect = 1e-10
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 43/185 (23%)
Query: 320 LHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIR 379
L I + ++ G +G+D+ ++PS + PI
Sbjct: 156 LGIIKKKKTVLIPG--SGVDLDRFSPSPE----------------------------PIP 185
Query: 380 PDCPLIGFIGRLDYQKGIDLIRLAAPEILAD---DIQFVMLGSGDPQFESWMRDTEATYK 436
D P+ F+ RL KGID + L A IL +++ +++G GD + + + + E
Sbjct: 186 EDDPVFLFVARLLKDKGIDEL-LEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGL 244
Query: 437 DKYRGWVGF--NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT--GGLR 492
+ ++GF +VP + A D+ ++PS E L AM G PV+ AT G R
Sbjct: 245 EGRVEFLGFRDDVP---ELLAAADVFVLPSYREGLPRVLLEAMAMG-RPVI-ATDVPGCR 299
Query: 493 DTVEN 497
+ V +
Sbjct: 300 EAVID 304
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 53/247 (21%), Positives = 92/247 (37%), Gaps = 64/247 (25%)
Query: 334 ITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDY 393
I NG+DI ++ G+ + PI PD +I F+GRL
Sbjct: 176 IPNGVDI------------PPFAALPSRGRRR---------KFPILPDKRIILFLGRLHP 214
Query: 394 QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISH 451
+KG+DL+ A ++ D V+ G + + + ++ A +
Sbjct: 215 KKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALG------------LED 262
Query: 452 RIT--------------AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497
R+T A D+ ++PS E G+ A+ GT PVV +
Sbjct: 263 RVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVV---------TTD 312
Query: 498 FNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM-RRGMEKDYTWEN 556
P+ G GW + +++ ALR A+ + K+ G R +E+ ++W
Sbjct: 313 KVPWQELIE-YGCGW-VVDDDVDALAAALRRALELPQRLKAM--GENGRALVEERFSWTA 368
Query: 557 AAIQYEQ 563
A Q +
Sbjct: 369 IAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 6e-10
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 38/212 (17%)
Query: 291 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEH 350
K AI ADR++ VS G +I + L K + I NGID E+ P
Sbjct: 139 KTAIEAADRVIAVSGGMREDILKY------YPDLDPEKVHV--IYNGIDTKEYKPDDGNV 190
Query: 351 IASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD 410
+ Y ID P I F+GR+ QKG+ + L A +
Sbjct: 191 VLDRYGID---------------------RSRPYILFVGRITRQKGVPHL-LDAVHYIPK 228
Query: 411 DIQFVML-GSGD-PQFESWMRDTEATYKDKYRG---WVGFNVPISH--RITAGCDILLMP 463
D+Q V+ G+ D P+ +R A D+ R W+ +P + + ++ + P
Sbjct: 229 DVQVVLCAGAPDTPEVAEEVRQAVALL-DRNRTGIIWINKMLPKEELVELLSNAEVFVCP 287
Query: 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTV 495
S +EP G+ L AM GT V ATGG+ + V
Sbjct: 288 SIYEPLGIVNLEAMACGTPVVASATGGIPEVV 319
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 8e-09
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 59/247 (23%)
Query: 334 ITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDY 393
I NG+D ++P D + L++ELGLP D LIG + RL
Sbjct: 164 IPNGVDTERFSPDLDA-----------------RARLREELGLP--EDTFLIGIVARLHP 204
Query: 394 QKGI-DLIRLAAPEILAD--DIQFVMLGSGD--PQFESWMRDTEATYKDKYRGWVG--FN 446
QK L+R AA +L + + +++G G E + E +DK +G +
Sbjct: 205 QKDHATLLR-AAALLLKKFPNARLLLVGDGPDRANLEL-LALKELGLEDKVI-LLGERSD 261
Query: 447 VPISHRITAGCDILLMPSRFE--PCGLNQLYAMRYGTIPVVHAT--GGLRDTVENFNPFA 502
VP + D+ ++ S E P L + AM G +PVV AT G + V +
Sbjct: 262 VP---ALLNALDVFVLSSLSEGFPNVLLE--AMACG-LPVV-ATDVGDNAELVGD----- 309
Query: 503 REGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL---MRRGMEKDYTWENAAI 559
TG+ +P + L AI + + L R +E++++ E
Sbjct: 310 -------TGF-LVPPGDPEALAE---AIEALLADPALRQALGEAARERIEENFSIEAMVE 358
Query: 560 QYEQVFE 566
YE+++
Sbjct: 359 AYEELYR 365
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 1e-08
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 26/192 (13%)
Query: 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEILADDIQFVMLGSGDPQFESW 427
AL+ LG P RP ++ ++GRL +K ++ L+ P ++ V++G G P +
Sbjct: 187 ALRARLGPPDRP---VLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDG-PA-RAR 241
Query: 428 MRDTEATYKD-KYRGWV-GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV 485
+ EA Y + + G++ G + A D+ + PSR E GL L AM G V
Sbjct: 242 L---EARYPNVHFLGFLDGEELA---AAYASADVFVFPSRTETFGLVVLEAMASGLPVVA 295
Query: 486 HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMR 545
GG D V + G P E+ AL A+ E +
Sbjct: 296 PDAGGPADIVTD----------GENGLLVEPGDAEAFAAALA-ALLADPELRRRM-AARA 343
Query: 546 RGMEKDYTWENA 557
R + +WE
Sbjct: 344 RAEAERRSWEAF 355
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 3e-07
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 29/188 (15%)
Query: 385 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSG-DPQFESWMRDTEATYKDKYRGWV 443
GFIG+L KG+DL+ A + DI+ V++G+G + + ES+ + + + ++
Sbjct: 194 FGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELEGDPRVE-----FL 248
Query: 444 GF--NVPISHRITAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVHAT--GGLRDTVENF 498
G I A D+L++PS + E L A+ G PV+ A+ GG+ + V +
Sbjct: 249 GAYPQEEIDDFY-AEIDVLVVPSIWPENFPLVIREALAAGV-PVI-ASDIGGMAELVRD- 304
Query: 499 NPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAA 558
G F P E L A+ + E +R G+E + E+ A
Sbjct: 305 ---------GVNGLLFPPGDAED----LAAALERLIDDPDLLE-RLRAGIEPPRSIEDQA 350
Query: 559 IQYEQVFE 566
+Y +++
Sbjct: 351 EEYLKLYR 358
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 7e-07
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 383 PLIGFIGRLDYQKGID-LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY--KDKY 439
P F+GRL Y KG+D L+ AA + D V++G G E+ + A D+
Sbjct: 192 PFFLFVGRLVYYKGLDVLLE-AAAAL--PDAPLVIVGEGP--LEAELEALAAALGLLDRV 246
Query: 440 RGWVGFNVPISHRIT--AGCDILLMPS--RFEPCGLNQLYAMRYGTIPVV 485
R ++G + + A CD+ + PS R E G+ L AM +G PV+
Sbjct: 247 R-FLGR-LDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFG-KPVI 293
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 43/216 (19%)
Query: 369 ALQKELGLPIRPDCPLIGFIGRL-DYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFE 425
AL ELGL P+IGFIG Y+ G+DL+ A P +L D + +++G G PQ E
Sbjct: 203 ALAAELGLE---GAPVIGFIGSFYAYE-GLDLLVAALPRLLRRHPDARLLLVGGG-PQEE 257
Query: 426 SWMRDTEAT-YKDKYRGWVGFNVPISH----RITAGCDILLMP---SRF----EPCGLNQ 473
+ A D+ V F + H R + D+L P R P L
Sbjct: 258 ALRAQAAALGLADR----VVFTGRVPHDEVERYYSLIDVLAYPRLPMRLTELVTP--LKP 311
Query: 474 LYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533
L AM G + GG R+ + + GE TG F ++ AL +
Sbjct: 312 LEAMAQGRLVAASDVGGHRELIRD---------GE-TGVLFPAGDPAALAAALLALL--- 358
Query: 534 REHKSSWEGLMRRGM---EKDYTWENAAIQYEQVFE 566
++++ W L E + W + +Y+ V+
Sbjct: 359 -DNRAQWPELRAAARRFVETERNWAASVARYQDVYR 393
|
PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 7e-06
Identities = 36/156 (23%), Positives = 52/156 (33%), Gaps = 28/156 (17%)
Query: 381 DCPLIGFIGRLDYQKGID-LIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATYKD 437
IG G G+ L+ A P + D++ ++GSG + +
Sbjct: 1 GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGPEELARLAPNVH----- 55
Query: 438 KYRGWVGFNVPISHRITAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVE 496
+ G+V + A D+ L P RF L L A+ G PVV AT
Sbjct: 56 -FLGFV----EDLAALLASADVALAPLRFGAGSPLKLLEALAAGL-PVV-AT-------- 100
Query: 497 NFNPFAREGSGEGTGWSFL-PLSEESMLTALRFAIR 531
EG E GW L E A+ +
Sbjct: 101 ---DIGAEGLPEDLGWGVLVADDPEEFAEAIVRLLA 133
|
Length = 134 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 57/218 (26%), Positives = 85/218 (38%), Gaps = 66/218 (30%)
Query: 297 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYS 356
AD+++ VS+G E L ++L + I N IDI E ++E
Sbjct: 136 ADKIVAVSEG------VKED---LLKLLGIPPDKIEVIYNPIDIEEIRALAEE------- 179
Query: 357 IDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEILAD--DIQ 413
L L I PD P+I +GRL QKG D LIR A + + D +
Sbjct: 180 ----------------PLELGIPPDGPVILAVGRLSPQKGFDTLIR-AFALLRKEGPDAR 222
Query: 414 FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT------------AGCDILL 461
V+LG G +R+ + ++ R+ D+ +
Sbjct: 223 LVILGDGP------LREELEALAKELG--------LADRVHFLGFQSNPYPYLKAADLFV 268
Query: 462 MPSRFEPCGLNQLYAMRYGTIPVVHAT--GGLRDTVEN 497
+ SR+E L AM GT PVV AT G R+ +E+
Sbjct: 269 LSSRYEGFPNVLLEAMALGT-PVV-ATDCPGPREILED 304
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 95/528 (17%), Positives = 160/528 (30%), Gaps = 166/528 (31%)
Query: 67 NIVFVTAEAAPYSKTGG--LGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKD 124
I+ ++ P G ++ L RGH V V++
Sbjct: 1 KILILSQYFPPELGGGAFRTTELA----EELVKRGHEVTVITGSP--------------- 41
Query: 125 LGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLL 184
G+ + E +GV V P Y + G + F + L
Sbjct: 42 -------NYPSGKIYKGYKREEVDGVRVHRVPLPPYKKNGL----LKRLLNYLSFALSAL 90
Query: 185 CYA-----------ACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYK 233
A PL++ L +LLA
Sbjct: 91 LALLKRRRRPDVIIATSPPLLIALAA--------------------LLLARLKG------ 124
Query: 234 DARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGA 293
A +L + +L P + LGL L +
Sbjct: 125 -APFVLEVRDL-----WPES-AVALGLLKNG-SLLYRLL-RKLERLIYRR---------- 165
Query: 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS 353
AD ++ +S G Y + + K + I NG+D+ + P +
Sbjct: 166 ---ADAIVVISPGM--------REYLVRRGVPPEKISV--IPNGVDLELFKPPPAD---- 208
Query: 354 HYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD--D 411
+L+KELGL D ++ + G + +G+D + L A +L D D
Sbjct: 209 --------------ESLRKELGL---DDKFVVLYAGNIGRAQGLDTL-LEAAALLKDRPD 250
Query: 412 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV----PISH----RITAGCDILLMP 463
I+F+++G G P+ E +A D NV + + A D+ L+P
Sbjct: 251 IRFLIVGDG-PEKEELKELAKALGLD--------NVTFLGRVPKEELPELLAAADVGLVP 301
Query: 464 SRFEP-CGL---NQLY-AMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSFLPL 517
+ P ++L+ M G PV+ + G + VE G G P
Sbjct: 302 LKPGPAFEGVSPSKLFEYMAAG-KPVLASVDGESAELVE----------EAGAGLVVPPG 350
Query: 518 SEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYE 562
E AL AI + + G +E+ ++ E A +
Sbjct: 351 DPE----ALAAAILELLDDPEERAEMGENGRRYVEEKFSREKLAERLL 394
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 3e-05
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 376 LPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTE 432
L I D P++ ++GRL +K ID LIR A +L D++ V++G G P+ E + +
Sbjct: 196 LGIPEDEPVLLYVGRLAKEKNIDFLIR-AFARLLKEEPDVKLVIVGDG-PEREE-LEELA 252
Query: 433 ATYK-DKYRGWVGFNVP---ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV-HA 487
+ GF VP + A D+ + S E GL L AM G PVV
Sbjct: 253 RELGLADRVIFTGF-VPREELPDYYKA-ADLFVFASTTETQGLVLLEAMAAGL-PVVAVD 309
Query: 488 TGGLRDTVEN 497
GL D V +
Sbjct: 310 APGLPDLVAD 319
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 31/145 (21%)
Query: 367 KIALQKELGLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEILADD--IQFVMLGSGDPQ 423
+ L+K+LG D +I F+GRLD KG+D LI A +L D + V++G GD
Sbjct: 214 RKKLRKKLGF--SEDEKIILFVGRLDEIKGVDYLIE-AFKIVLKKDPNCRLVIVGDGD-- 268
Query: 424 FESWMRDTEATY----------KDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQ 473
+ ++++ + + K+K ++I D+ ++PS E C
Sbjct: 269 YSRYLQECKKIWSKITFTGKLDKEKLYEL--------YQIA---DVGVLPSFHEQCSYVA 317
Query: 474 LYAMRYGTIPVVHATG-GLRDTVEN 497
+ M +G +P++ T GL + +E+
Sbjct: 318 IEMMMHG-LPLIGTTSTGLSEMIED 341
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 60/341 (17%), Positives = 112/341 (32%), Gaps = 83/341 (24%)
Query: 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGE 285
P + ++ IH+L FP +
Sbjct: 95 TAPLLRLRGVPVVVTIHDLIP-----------------------LRFPEYFSPGFRRYFR 131
Query: 286 AVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNP 345
+ L+ A+ AD ++TVS+ ++++ D+ +
Sbjct: 132 RL--LRRALRRADAIITVSE-------------------ATKR----------DLLRYLG 160
Query: 346 SSDEHIASHYS-IDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAA 404
+ I +D + + + L L RP ++G ++ +K ++ + L A
Sbjct: 161 VPPDKIVVIPLGVDPRFRPPPAEAEVLRALYLLPRP---YFLYVGTIEPRKNLERL-LEA 216
Query: 405 PEILAD---DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS--HRITAGCDI 459
L D + V++G E + ++G+ V + G
Sbjct: 217 FARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGY-VSDEELAALYRGARA 275
Query: 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSE 519
+ PS +E GL L AM GT PV+ + E +G+ F PL
Sbjct: 276 FVFPSLYEGFGLPVLEAMACGT-PVIASNIS---------SL-PEVAGDA-ALYFDPLDP 323
Query: 520 ESMLTALRFAIRTYREHKSSWEGLMRRGME--KDYTWENAA 558
E++ A+ + E + E L RG+ K ++WE A
Sbjct: 324 EALAAAIERLL----EDPALREELRERGLARAKRFSWEKTA 360
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 33/128 (25%)
Query: 387 FIGRLDYQKGID-LIRLAAPEILA---DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW 442
+GRL QKG D LI A +A D + ++G G R+ +
Sbjct: 183 AVGRLVPQKGFDLLIEAWA--KIAKKHPDWKLRIVGDGP------EREALEALIKELG-- 232
Query: 443 VGFNVPISHRIT------------AGCDILLMPSRFEPCGLNQLYAMRYGTIPVV-HATG 489
+ R+ A I ++ SRFE + L AM +G +
Sbjct: 233 ------LEDRVILLGFTKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPT 286
Query: 490 GLRDTVEN 497
G + +E+
Sbjct: 287 GPSEIIED 294
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 8e-04
Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 17/180 (9%)
Query: 379 RPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDK 438
P+ PLI ++GRL +K +D ++ + + FV G + E T +
Sbjct: 260 EPEKPLIVYVGRLGAEKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGM 319
Query: 439 YRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVEN 497
+G +S +G D+ +MPS E G L AM G +PVV A GG+ D +
Sbjct: 320 LQG-----DELSQAYASG-DVFVMPSESETLGFVVLEAMASG-VPVVAARAGGIPDII-- 370
Query: 498 FNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENA 557
TG+ + P + + L + E + R +EK + W A
Sbjct: 371 -----PPDQEGKTGFLYTPGDVDDCVEKLE-TLLADPELRERMGAAAREEVEK-WDWRAA 423
|
Length = 465 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.001
Identities = 61/243 (25%), Positives = 94/243 (38%), Gaps = 53/243 (21%)
Query: 334 ITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGF--IGRL 391
I NGID T + P K +K LGLP D +I F +G
Sbjct: 164 IPNGIDTTIFRPRD-------------------KREARKRLGLP--ADKKIILFGAVGGT 202
Query: 392 DYQKGIDLIRLAAPEILA----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447
D +KG D + + A + LA DDI+ V+ G+ DP+ + + Y G N
Sbjct: 203 DPRKGFDEL-IEALKRLAERWKDDIELVVFGASDPEIP-----PDLPFPVHYLGS--LND 254
Query: 448 PISHR-ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV-HATGGLRDTVENFNPFAREG 505
S I + D+ ++PS E + A+ GT PVV GG+ D V++
Sbjct: 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVGGIPDIVDH-------- 305
Query: 506 SGEGTGWSFLPLSEESMLTALRFAI--RTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQ 563
TG+ P E + + + + RE R E ++ A +Y
Sbjct: 306 --GVTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAA---RELAENEFDSRVQAKRYLS 360
Query: 564 VFE 566
++E
Sbjct: 361 LYE 363
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 576 | |||
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 100.0 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 100.0 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 100.0 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.98 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 99.98 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.97 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 99.97 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.97 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.97 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.97 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.96 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 99.96 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.96 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.96 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.96 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.96 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.95 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.95 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.95 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.94 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.94 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.93 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.91 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.9 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.89 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.89 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.87 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.87 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.87 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.86 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.84 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.83 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.83 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.81 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.81 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.79 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 99.76 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.76 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.71 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.71 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.71 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.68 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.67 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.58 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.51 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.44 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.4 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.39 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.37 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.32 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.32 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.29 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.25 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.14 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.07 | |
| KOG2099 | 843 | consensus Glycogen phosphorylase [Carbohydrate tra | 98.99 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 98.92 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.88 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.84 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.52 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.26 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.2 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.19 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.14 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.02 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.87 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 97.81 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.7 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 97.67 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 97.63 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 97.61 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 97.53 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.5 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 97.34 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 97.27 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 96.98 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.93 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 96.75 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 96.7 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 96.69 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.64 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.44 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 95.77 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 95.68 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 95.53 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 95.08 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 95.0 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 94.96 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 94.28 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 93.5 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 93.02 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 92.54 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 92.41 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 91.6 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 91.15 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 91.0 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 90.73 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 90.54 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 89.5 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 89.06 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 88.74 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 88.2 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 87.94 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 87.41 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 87.19 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 86.54 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 86.0 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 85.9 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 85.64 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 85.3 | |
| KOG0780 | 483 | consensus Signal recognition particle, subunit Srp | 85.29 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 85.15 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 84.95 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 84.33 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 84.31 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 84.06 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 83.98 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 83.63 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 83.38 | |
| PLN02764 | 453 | glycosyltransferase family protein | 83.3 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 83.28 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 83.02 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 82.81 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 82.42 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 82.32 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 80.61 |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-65 Score=549.96 Aligned_cols=489 Identities=33% Similarity=0.535 Sum_probs=398.0
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCee
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQ 138 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (576)
...+.++|||+|+++|+.|+.++||++-+++.|+++|+++||+|.||+|.|+..... ...........+.+.+.+...
T Consensus 475 ~~~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~--~~~~~~~~~~~~~~~~~g~~~ 552 (977)
T PLN02939 475 LSGTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYD--QIRNLKVLDVVVESYFDGNLF 552 (977)
T ss_pred cCCCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChh--hhhcccccceEEEEeecCcee
Confidence 455577899999999999999999999999999999999999999999999754211 011000012223333444455
Q ss_pred EEEEEEeeecCeEEEEecCC---CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCcc
Q 008154 139 EIAFFHEYREGVDWVFVDHP---SYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA 215 (576)
Q Consensus 139 ~~~~~~~~~~gv~v~~l~~~---~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~ 215 (576)
..++|...++||++|+++++ .|..+..+||. .|+..||++|++++++++...+ + +|||||||+|++
T Consensus 553 ~~~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~-----~Dn~~RF~~FsrAaLe~~~~~~---~---~PDIIH~HDW~T 621 (977)
T PLN02939 553 KNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGE-----HDDFKRFSYFSRAALELLYQSG---K---KPDIIHCHDWQT 621 (977)
T ss_pred EEEEEEEEECCeeEEEEecCCchhccCCCCCCCC-----ccHHHHHHHHHHHHHHHHHhcC---C---CCCEEEECCccH
Confidence 68999999999999999853 25556678874 4899999999999999987653 2 899999999999
Q ss_pred chHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHH
Q 008154 216 GLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV 295 (576)
Q Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 295 (576)
++++.++.......+ ..++++|||+|+..++|.|+...+..+|++...+......- ..+.+.+|+.+.++.
T Consensus 622 aLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le--------~~~~~~iN~LK~GIv 692 (977)
T PLN02939 622 AFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQ--------DNAHGRINVVKGAIV 692 (977)
T ss_pred HHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhh--------hccCCchHHHHHHHH
Confidence 998544443222111 25689999999999999999888888888877653211100 002456899999999
Q ss_pred hccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcC
Q 008154 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 375 (576)
Q Consensus 296 ~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 375 (576)
+||.|++||+.+++++.+ .++++|++.+.....++.+|+||||++.|.|.....|..+|...+|.++..++..+++.+|
T Consensus 693 ~AD~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelG 771 (977)
T PLN02939 693 YSNIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLG 771 (977)
T ss_pred hCCeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhC
Confidence 999999999999999987 7788899988888999999999999999999988888899999999999999999999999
Q ss_pred CCCC-CCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCC-hhhHHHHHHHHHHh--cCceEEEccCChhHHH
Q 008154 376 LPIR-PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATY--KDKYRGWVGFNVPISH 451 (576)
Q Consensus 376 i~~~-~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 451 (576)
++.+ ++.++|+|+||+.+.||++++++|+.++...+++|+|+|+|+ +.++...+.+...+ ..++.+...++..+..
T Consensus 772 L~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah 851 (977)
T PLN02939 772 LSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSH 851 (977)
T ss_pred CCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHH
Confidence 9843 467899999999999999999999998877789999999995 33344455555544 3457666677777777
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.+|+++|++|+||++|+||++++|||+||+|+|++++||..|.|.+.+... ..+.+.||++++++|+++++++|.+++.
T Consensus 852 ~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~-i~~eg~NGfLf~~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 852 SIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDET-IPVELRNGFTFLTPDEQGLNSALERAFN 930 (977)
T ss_pred HHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccc-cccCCCceEEecCCCHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999997643221 0122579999999999999999999988
Q ss_pred HhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 532 TYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
.+.+|++.|.+++++++.+.|||++++++|.++|+.++..
T Consensus 931 ~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 931 YYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred HhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 7667899999999999889999999999999999998764
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-63 Score=525.15 Aligned_cols=479 Identities=37% Similarity=0.600 Sum_probs=386.8
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeec-CCeeEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCF-GGEQEIAF 142 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 142 (576)
++|||+|++.|..|+.++||++-+++.|.++|+++||+|.||.|.|+.-... .........+... +. ..++
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~------~~~~~~~~~~~~~~~~--~~~~ 73 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAG------IEDAEQVHSFPDLFGG--PARL 73 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhh------hcCceEEEEEeeeCCc--eEEE
Confidence 4599999999999999999999999999999999999999999999763210 1011111112111 22 5678
Q ss_pred EEeeecCeEEEEecCCCCCCC-CCCCCCC-CCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHH
Q 008154 143 FHEYREGVDWVFVDHPSYHRP-GNPYGDI-NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV 220 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~~~~~-~~~y~~~-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~ 220 (576)
+....+||++|+++++.|..+ ..+|++. .++|.|+..||++|+.+++++++.+.. .+ +|||||+|+|++++++.
T Consensus 74 ~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~-~~---~pDIiH~Hdw~~~l~~~ 149 (485)
T PRK14099 74 LAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVP-GF---VPDIVHAHDWQAGLAPA 149 (485)
T ss_pred EEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhcc-CC---CCCEEEECCcHHHHHHH
Confidence 888889999999999886554 4588764 357999999999999999988754311 23 89999999999999998
Q ss_pred HHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccce
Q 008154 221 LLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRL 300 (576)
Q Consensus 221 ~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v 300 (576)
++..+.. .++|+|+|+|+..+++.++...+..++++...+...... +.+..++++.+++.||.|
T Consensus 150 ~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 150 YLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVE-----------YYGGIGYLKAGLQLADRI 213 (485)
T ss_pred HHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhh-----------hCCCccHHHHHHHhcCee
Confidence 8864321 468999999999999999888877788776655322111 134468899999999999
Q ss_pred eccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCC
Q 008154 301 LTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRP 380 (576)
Q Consensus 301 ~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (576)
++||+.+++++.+...+.++++.+.....++.+|+||||++.|.|.....+..+|...++.++..++..+++.+|++.++
T Consensus 214 itVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 293 (485)
T PRK14099 214 TTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDP 293 (485)
T ss_pred eecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCccc
Confidence 99999999999876666777777777788999999999999999988777777888878888888889999999998656
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
+.++++++||+.++||++++++|++++.+++++|+|+|+|++..++..+.+.+....++..+.++++++...++++||++
T Consensus 294 ~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDif 373 (485)
T PRK14099 294 DALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADAL 373 (485)
T ss_pred CCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCEE
Confidence 78899999999999999999999999987789999999997655666666665666676667888776664445789999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSW 540 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~ 540 (576)
|+||++|+||++.+|||+||+|+|+++.||..|.+.+.+.. .+..+..+|++++++|+++++++|.+++..+ +|++.|
T Consensus 374 v~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~-~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~-~d~~~~ 451 (485)
T PRK14099 374 LVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEM-AIATGVATGVQFSPVTADALAAALRKTAALF-ADPVAW 451 (485)
T ss_pred EECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeeccccc-ccccCCCceEEeCCCCHHHHHHHHHHHHHHh-cCHHHH
Confidence 99999999999999999999999999999999999762100 0001126899999999999999999875433 588999
Q ss_pred HHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 541 EGLMRRGMEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 541 ~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
.+++++++.++|||++++++|.++|+++++..
T Consensus 452 ~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~~~ 483 (485)
T PRK14099 452 RRLQRNGMTTDVSWRNPAQHYAALYRSLVAER 483 (485)
T ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhh
Confidence 99999998889999999999999999987643
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-62 Score=522.21 Aligned_cols=482 Identities=31% Similarity=0.545 Sum_probs=387.6
Q ss_pred cCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEE
Q 008154 62 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIA 141 (576)
Q Consensus 62 ~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (576)
..++|||+|++.|..|+.++||++-+++.|.++|+++||+|.||.|.|+.-........ .......+.+...+.....+
T Consensus 2 ~~~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 80 (489)
T PRK14098 2 SRRNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLH-DVLRLSDIEVPLKEKTDLLH 80 (489)
T ss_pred CCCCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccc-cceEEEEEEEeecCeeEEEE
Confidence 34569999999999999999999999999999999999999999999976321000000 00011112223322222333
Q ss_pred EEEeeec--CeEEEEecCCCCCCCCCCCCCC--CCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccch
Q 008154 142 FFHEYRE--GVDWVFVDHPSYHRPGNPYGDI--NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL 217 (576)
Q Consensus 142 ~~~~~~~--gv~v~~l~~~~~~~~~~~y~~~--~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~ 217 (576)
+.....+ ++++|+++++.|..+..+|++. .++|.|+..||++|+.++++.+...+ + +|||||+|+|++++
T Consensus 81 ~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~---~---~pDiiH~hdw~t~l 154 (489)
T PRK14098 81 VKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLG---W---KPDIIHCHDWYAGL 154 (489)
T ss_pred EEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcC---C---CCCEEEecCcHHHH
Confidence 3333333 6999999999887777899874 36899999999999999999887653 2 89999999999999
Q ss_pred HHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhc
Q 008154 218 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297 (576)
Q Consensus 218 ~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 297 (576)
++.+++.+........++|+|+|+|+..+++.++...+..+ ++...+.... .+.+.+|+++.++..|
T Consensus 155 ~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~------------~~~~~~n~lk~~i~~a 221 (489)
T PRK14098 155 VPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH------------REGDEVNMLYTGVEHA 221 (489)
T ss_pred HHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhh------------hcCCcccHHHHHHHhc
Confidence 99999876533332357899999999999998877655433 3333221110 0134579999999999
Q ss_pred cceeccCccchhhhccc-cCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCC
Q 008154 298 DRLLTVSKGYSWEITTV-EGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGL 376 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~-~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 376 (576)
|.|++||+.+++++.+. .+++++.+.+.....++.+|+||||++.|.|.....+..+|....+.++..++..+++.+|+
T Consensus 222 d~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl 301 (489)
T PRK14098 222 DLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGL 301 (489)
T ss_pred CcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCC
Confidence 99999999999999763 45667777777778899999999999999988777777788887888888899999999999
Q ss_pred CCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhc
Q 008154 377 PIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 456 (576)
Q Consensus 377 ~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 456 (576)
+.+++.++|+++||+.+.||++++++|+.++.+++++|+|+|+|++.+++.++.+.+.+..++.+...++.+++..++++
T Consensus 302 ~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~ 381 (489)
T PRK14098 302 PFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAG 381 (489)
T ss_pred CCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHh
Confidence 87778899999999999999999999999998778999999999765556666666666667777777788888899999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhC
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 536 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~ 536 (576)
||++|+||.+|+||++.+|||+||+|+|+++.||..|.+.+... ++.+|++++++|+++++++|.+++..+ +|
T Consensus 382 aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~------~~~~G~l~~~~d~~~la~ai~~~l~~~-~~ 454 (489)
T PRK14098 382 LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSE------DKGSGFIFHDYTPEALVAKLGEALALY-HD 454 (489)
T ss_pred CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCC------CCCceeEeCCCCHHHHHHHHHHHHHHH-cC
Confidence 99999999999999999999999999999999999998864211 157999999999999999999987644 57
Q ss_pred HHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 537 KSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 537 ~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
++.|.+++++++++.|||++++++|.++|+++++
T Consensus 455 ~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 455 EERWEELVLEAMERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhc
Confidence 8999999999888999999999999999998874
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-62 Score=525.76 Aligned_cols=472 Identities=44% Similarity=0.729 Sum_probs=395.0
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||+++|+|+.|+.++||++.++..|+++|+++||+|.|++|.|+..... ..+.........+...++...+++|..
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDE---VDDQVKVVELVDLSVGPRTLYVKVFEG 77 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhh---hccCeEEEEEEEEeecCceeEEEEEEE
Confidence 89999999999988999999999999999999999999999999764321 111122234455666778889999999
Q ss_pred eecCeEEEEecCCC-CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 146 YREGVDWVFVDHPS-YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 146 ~~~gv~v~~l~~~~-~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
.++|+++|+++++. +.+...+|++ +|.++..|+..|+.++.+++...+. +|||||+|+|++++++.+++.
T Consensus 78 ~~~~v~~~~i~~~~~~~r~~~~y~~---~~~d~~~r~~~f~~a~~~~~~~~~~------~~DiiH~hdw~~~~~~~~l~~ 148 (473)
T TIGR02095 78 VVEGVPVYFIDNPSLFDRPGGIYGD---DYPDNAERFAFFSRAAAELLSGLGW------QPDVVHAHDWHTALVPALLKA 148 (473)
T ss_pred EECCceEEEEECHHHcCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHHhcCC------CCCEEEECCcHHHHHHHHHHh
Confidence 99999999999886 4444568885 6778999999999999998766432 899999999999999998886
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
..+. .++|+|+|+|+..+++.++...+..++++...+..... .....+++++.+++.||.+++||
T Consensus 149 ~~~~----~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~k~~~~~ad~v~tVS 213 (473)
T TIGR02095 149 VYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL-----------EFYGRVNFLKGGIVYADRVTTVS 213 (473)
T ss_pred hccC----CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhh-----------hcCCchHHHHHHHHhCCcCeecC
Confidence 5421 14899999999998998887776666666444322111 11346789999999999999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+.+++++.+..++.++++.+.....++.+|+||||.+.|.|.....+..+|...+|.++..++..+++.+|++.+++.++
T Consensus 214 ~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~ 293 (473)
T TIGR02095 214 PTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPL 293 (473)
T ss_pred HhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCE
Confidence 99999998766667777666667889999999999999998877777788888888888888999999999986567899
Q ss_pred EEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
|+|+||+.++||++++++|+.++.+.+++|+|+|+|++.+++..+.+......++.+..+++.+++..++++||++|+||
T Consensus 294 i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS 373 (473)
T TIGR02095 294 FGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPS 373 (473)
T ss_pred EEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCC
Confidence 99999999999999999999999877899999999976566666666666667788888888888888999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 008154 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 544 (576)
Q Consensus 465 ~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 544 (576)
.+|+||++.+|||+||+|+|+++.||..|.+.+.+.. .++.+|++++++|+++++++|.+++..+.++++.+.+++
T Consensus 374 ~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~----~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 449 (473)
T TIGR02095 374 RFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPE----AESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQ 449 (473)
T ss_pred CcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCC----CCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999999999999999999999999871100 012899999999999999999999887656899999999
Q ss_pred HHHHhhhCCHHHHHHHHHHHHHHh
Q 008154 545 RRGMEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 545 ~~a~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+++++++|||++++++|.++|+++
T Consensus 450 ~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 450 KNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHhccCCCcHHHHHHHHHHHHhC
Confidence 999888999999999999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-61 Score=510.75 Aligned_cols=463 Identities=42% Similarity=0.702 Sum_probs=376.7
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||+|+|+|+.|+.++||++.++..|+++|+++||+|.|++|.|+..... .. +......+ ...+++..
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~---~~---~~~~~~~~------~~~~~~~~ 68 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREK---LR---DAQVVGRL------DLFTVLFG 68 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhh---hc---CceEEEEe------eeEEEEEE
Confidence 89999999999988899999999999999999999999999998653211 00 00111111 12344443
Q ss_pred --eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 146 --YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 146 --~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
.++|+++|+++++.+..+..+|+. .++..||.+|+.++.+.+.+++. +|||||+|+|++++++.+++
T Consensus 69 ~~~~~gv~v~~v~~~~~~~~~~~y~~-----~d~~~r~~~f~~~~~~~~~~~~~------~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 69 HLEGDGVPVYLIDAPHLFDRPSGYGY-----PDNGERFAFFSWAAAEFAEGLDP------RPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred eEEcCCceEEEEeCHHHcCCCCCCCC-----cChHHHHHHHHHHHHHHHHhcCC------CCceEEECCcHHHHHHHHHH
Confidence 568999999998877666678863 48899999999999998876532 89999999999999999888
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
... . ....++|+|+|+|+..+++.++.+....++++...+..... .....+++++.+++.||.+++|
T Consensus 138 ~~~-~-~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ad~vitv 204 (466)
T PRK00654 138 EKY-W-RGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGL-----------EFYGQISFLKAGLYYADRVTTV 204 (466)
T ss_pred Hhh-h-ccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhh-----------hcCCcccHHHHHHHhcCcCeee
Confidence 653 1 11136899999999999998887777667766544321111 1123578999999999999999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|+.+++++.+..+++++.+.+.....++.+|+||||.+.|.|.....+..+|...++.++..++..+++.+|+++ ++.+
T Consensus 205 S~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~-~~~~ 283 (466)
T PRK00654 205 SPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPD-DDAP 283 (466)
T ss_pred CHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCC-CCCc
Confidence 999999998766777777777777889999999999999998776666667877778888888899999999972 3678
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+|+|+||+.++||++.+++|++++.+++++|+|+|+|++.+.+..+.+.+.+..++.++.+++.++...++++||++|+|
T Consensus 284 ~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv~v~P 363 (466)
T PRK00654 284 LFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMP 363 (466)
T ss_pred EEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCEEEeC
Confidence 99999999999999999999999987789999999997655566666666666677777888777777899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|+||++.+|||+||+|+|+++.||..|.+.+.+.. .++.+|++++++|+++++++|.+++..+ .+++.+.++
T Consensus 364 S~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~----~~~~~G~lv~~~d~~~la~~i~~~l~~~-~~~~~~~~~ 438 (466)
T PRK00654 364 SRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE----DGEATGFVFDDFNAEDLLRALRRALELY-RQPPLWRAL 438 (466)
T ss_pred CCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC----CCCCceEEeCCCCHHHHHHHHHHHHHHh-cCHHHHHHH
Confidence 99999999999999999999999999999999871100 0128999999999999999999988755 467779999
Q ss_pred HHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 544 MRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 544 ~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
++++++++|||++++++|.++|+++++
T Consensus 439 ~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 439 QRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 999888899999999999999998875
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-59 Score=499.23 Aligned_cols=468 Identities=43% Similarity=0.720 Sum_probs=390.1
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||+++|+|+.|+.++||++.++..|+++|+++||+|.|++|.|+..... ..+.......+.+...++...+++|+..
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDE---LRGQLLVLRLFGVPVGGRPEYVGVFELP 77 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhH---hccCeEEEEEEeeccCCceeEEEEEEEE
Confidence 5999999999988999999999999999999999999999999875321 1111111222345666788899999999
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
++|+++|+++++.+..+..+|+....+|.++..++..|+.++.+++..++. +|||||+|+|++++++.+++...
T Consensus 78 ~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~------~pDviH~hd~~t~~~~~~l~~~~ 151 (476)
T cd03791 78 VDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGW------KPDIIHCHDWHTGLVPALLKEKY 151 (476)
T ss_pred eCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCC------CCcEEEECchHHHHHHHHHHHhh
Confidence 999999999988877665566555567889999999999999998876532 89999999999999998888764
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChh-hhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSE-WYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
.. ....++|+|+|+|+..+++.++.......+.... .+.. ........+++++.++..||.+++||+
T Consensus 152 ~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ad~v~~vS~ 219 (476)
T cd03791 152 AD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHI-----------DGLEFYGQVNFLKAGIVYADAVTTVSP 219 (476)
T ss_pred cc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhh-----------cccccCCcccHHHHHHHhcCcCeecCH
Confidence 22 1224789999999998888777665544443321 1111 111224567899999999999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
.+++++.+..++.+++..+.....++.+|+||+|.+.|.|.....+...|....+..+..++..+++.+|++.+++.++|
T Consensus 220 ~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i 299 (476)
T cd03791 220 TYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLF 299 (476)
T ss_pred hHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEE
Confidence 99999987777777777777777899999999999999988877777788877888899999999999999755688999
Q ss_pred EEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSR 465 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~ 465 (576)
+|+||+.++||++++++|+.++.+.+++|+++|+|++...+..+.+......++.++.+++.++...++++||++++||.
T Consensus 300 ~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~ 379 (476)
T cd03791 300 GFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSR 379 (476)
T ss_pred EEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCC
Confidence 99999999999999999999998778999999999765566666666655677888888888888889999999999999
Q ss_pred CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCc------ceeEeCCCCHHHHHHHHHHHHHHhhhCHHH
Q 008154 466 FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEG------TGWSFLPLSEESMLTALRFAIRTYREHKSS 539 (576)
Q Consensus 466 ~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~------~G~~~~~~d~~~la~~i~~~l~~~~~~~~~ 539 (576)
+|+||++.+|||+||+|+|+++.||+.|.+.+ +. +|++++++|+++++++|.+++..+ .+++.
T Consensus 380 ~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~----------~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~-~~~~~ 448 (476)
T cd03791 380 FEPCGLTQMYAMRYGTVPIVRATGGLADTVID----------YNEDTGEGTGFVFEGYNADALLAALRRALALY-RDPEA 448 (476)
T ss_pred CCCCcHHHHHHhhCCCCCEECcCCCccceEeC----------CcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHH-cCHHH
Confidence 99999999999999999999999999999988 55 999999999999999999998754 46899
Q ss_pred HHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 008154 540 WEGLMRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 540 ~~~~~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
+.+++++++++.|||++++++|.++|+
T Consensus 449 ~~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 449 WRKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHhccCCChHHHHHHHHHHHh
Confidence 999999998889999999999999996
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-60 Score=512.22 Aligned_cols=498 Identities=18% Similarity=0.222 Sum_probs=379.7
Q ss_pred HHHHHhHHhhhhccccCCcccchhhhhhhhhhhccCCCceEEEEeec-----cCCccccCcHHHHHhhHHHHHHhCCCcE
Q 008154 28 FLLRVYHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAE-----AAPYSKTGGLGDVCGSLPVALAARGHRV 102 (576)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~~~s~e-----~~P~~~~GG~~~~~~~la~~l~~~G~~V 102 (576)
.|+..++.+++....|...+++.... ....+..|||||+| .+| +|+||+|+++++++|+++++|.++
T Consensus 55 ~f~~~~~~~~~~~~~y~~~~~~~~~~-------~~~~~~~~aYFs~E~gl~~~lp-iYsGGLG~LAgd~lksasdLg~P~ 126 (778)
T cd04299 55 EFLARYDRVLEDFDAYLEEPTWYQGR-------NDGEPLVAAYFSMEFGLHESLP-IYSGGLGILAGDHLKAASDLGLPL 126 (778)
T ss_pred HHHHHHHHHHHHHHHHhccCcccccc-------ccCCCCeeEEeccccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCE
Confidence 34555566666555555444333310 00122346699998 578 799999999999999999999999
Q ss_pred EEEEecCCCCCCcccchhccccC----------------------ceeEEEeecCCeeEEEEEEeeecCeEEEEecCCC-
Q 008154 103 MVVSPRYFNGTAADENFTLAKDL----------------------GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS- 159 (576)
Q Consensus 103 ~vi~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~- 159 (576)
+.||..|.+|++.+..-.+.++. ...+.++++|+.+.+++|+..++++++|++|++.
T Consensus 127 vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~ 206 (778)
T cd04299 127 VGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPVRDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIP 206 (778)
T ss_pred EEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEEecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCcc
Confidence 99999999996654432221111 3467889999999999999999999999999654
Q ss_pred ----CCC--CCCCCCCCCCCCCchHHHH---HHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHH-----HHHhh
Q 008154 160 ----YHR--PGNPYGDINGAFGDNQFRY---TLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV-----LLASK 225 (576)
Q Consensus 160 ----~~~--~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~-----~l~~~ 225 (576)
+.| +..+|++ |+..|+ ++|++++++++++++. +|||||+||||+++++. ++...
T Consensus 207 ~n~~~~R~iT~~LYg~------D~~~Rl~Qe~~Lg~agl~~Lr~lg~------~pdViH~ND~Haal~~lE~~R~ll~~~ 274 (778)
T cd04299 207 ENSPDDRGITDRLYGG------DQETRIQQEILLGIGGVRALRALGI------KPTVYHMNEGHAAFLGLERIRELMAEG 274 (778)
T ss_pred ccchhhcccccCCCCC------cHHHHHHHHHHHHHHHHHHHHHhCC------CCeEEEeCCCcHHHHHHHHHHHHHHHc
Confidence 555 3468986 788885 9999999999988764 79999999999999988 55432
Q ss_pred ccCCCC---CCCCcEEEEeecCCCCC--CCChhhhhh--------cCCChhhhcccccccccccccccCCcCccchhHHH
Q 008154 226 YRPHGV---YKDARSILVIHNLSHQG--VEPAATYKN--------LGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKG 292 (576)
Q Consensus 226 ~~~~~~---~~~~~~v~t~H~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (576)
...+.. ..+..+|||+||+.++| .||.+++++ +|++...+... +.....+..+.+||++.
T Consensus 275 g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~~~~~~l-------g~e~~~~~~~~~nM~~l 347 (778)
T cd04299 275 GLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSRDRFLAL-------GRENPGDDPEPFNMAVL 347 (778)
T ss_pred CCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCHHHHhhh-------ccccccCccCceeHHHH
Confidence 111111 12468999999999999 999998843 45544443322 22211122456999999
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCc------------
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL------------ 360 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~------------ 360 (576)
+++.|+.+++||+.+.+-. +.++.. +...++....++..|+||||.+.|..+....+++++.+.+|
T Consensus 348 aL~~S~~vNgVS~lHg~vs-r~mf~~-~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~ 425 (778)
T cd04299 348 ALRLAQRANGVSRLHGEVS-REMFAG-LWPGFPVEEVPIGHVTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEA 425 (778)
T ss_pred HHHhcCeeeeecHHHHHHH-HHHhhh-hhccCCcccCceeceeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhh
Confidence 9999999999999884322 112211 11222233557999999999999996677777777765444
Q ss_pred ----------ccchHhHHHHHHHc---------------------CCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc
Q 008154 361 ----------SGKVQCKIALQKEL---------------------GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA 409 (576)
Q Consensus 361 ----------~~~~~~~~~~~~~~---------------------~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~ 409 (576)
..+..++..+.+.. +.+.+++.++|+|++||.++||++++++++++|.+
T Consensus 426 ~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~ 505 (778)
T cd04299 426 VDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKR 505 (778)
T ss_pred hcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHH
Confidence 45555565554442 44556889999999999999999999999998854
Q ss_pred ------CCcEEEEEeCCChhhHHHHHHH------HH--HhcCceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHH
Q 008154 410 ------DDIQFVMLGSGDPQFESWMRDT------EA--TYKDKYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQ 473 (576)
Q Consensus 410 ------~~~~lii~G~g~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~ 473 (576)
.++++||+|+++|.++..++.+ ++ ..+++++++++|+..+++.++++||+|++||+ +|+||++.
T Consensus 506 il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSg 585 (778)
T cd04299 506 LLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSG 585 (778)
T ss_pred HhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccch
Confidence 5899999999998776644444 33 45679999999999999999999999999999 99999999
Q ss_pred HHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCC------------CCHHHHHHHHHHHHH-HhhhC----
Q 008154 474 LYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP------------LSEESMLTALRFAIR-TYREH---- 536 (576)
Q Consensus 474 lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~------------~d~~~la~~i~~~l~-~~~~~---- 536 (576)
|+||.+|.+++++.+|||.|.+ + +.|||.+.+ .|.+++.+.|++.+. .+++.
T Consensus 586 MKA~~NG~LnlSvlDGww~E~~-~----------g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g 654 (778)
T cd04299 586 MKAALNGGLNLSVLDGWWDEGY-D----------GENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGG 654 (778)
T ss_pred HHHHHcCCeeeecccCcccccc-C----------CCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999 4 699999987 467788888887776 55553
Q ss_pred -HHHHHHHHHHHHhh---hCCHHHHHHHHHHHH
Q 008154 537 -KSSWEGLMRRGMEK---DYTWENAAIQYEQVF 565 (576)
Q Consensus 537 -~~~~~~~~~~a~~~---~fs~~~~~~~y~~~y 565 (576)
|..|.+|+++++++ .|||++|+++|.+.|
T Consensus 655 ~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 655 YPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred CCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 78999999999887 999999999998754
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-58 Score=491.55 Aligned_cols=464 Identities=19% Similarity=0.249 Sum_probs=375.6
Q ss_pred EEEEeec-----cCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC-----------------
Q 008154 68 IVFVTAE-----AAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL----------------- 125 (576)
Q Consensus 68 I~~~s~e-----~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~----------------- 125 (576)
|||||+| ..| +|+||+|++++++.++++++|.+.+++|..|.+|++.+..-.+.++.
T Consensus 1 ~ayf~~E~g~~~~~p-~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLP-IYSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 6899998 578 79999999999999999999999999999999996654332111111
Q ss_pred -----ceeEEEeecCCeeEEEEEEeeecCeEEEEecCC-----CCCCC--CCCCCCCCCCCCchHHHH---HHHHHHHHh
Q 008154 126 -----GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHP-----SYHRP--GNPYGDINGAFGDNQFRY---TLLCYAACE 190 (576)
Q Consensus 126 -----~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~-----~~~~~--~~~y~~~~~~~~~~~~r~---~~~~~~~~~ 190 (576)
...+.++++|+...+++|+..++++++|+++++ .+.|. ..+|++ |...|+ .+|+.++++
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~------D~~~R~~Qe~fl~~a~l~ 153 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG------DKEMRIAQEIVLGIGGVR 153 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC------CHHHHHHHHHHHHHHHHH
Confidence 234788889999999999999999999999966 45553 368985 566777 999999999
Q ss_pred hcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc----cCCCCC---CCCcEEEEeecCCCCCC--CChhhhhh----
Q 008154 191 APLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY----RPHGVY---KDARSILVIHNLSHQGV--EPAATYKN---- 257 (576)
Q Consensus 191 ~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~----~~~~~~---~~~~~v~t~H~~~~~~~--~~~~~~~~---- 257 (576)
.++.++. +|||||+||||+++++.++.+.. ..+..+ .+..+|||+||+.++|. |+.+++..
T Consensus 154 ~l~~l~~------~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~ 227 (601)
T TIGR02094 154 ALRALGI------DPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGD 227 (601)
T ss_pred HHHHcCC------CceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhh
Confidence 9987754 89999999999999988864321 111111 14679999999999996 99888842
Q ss_pred ----cCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeE
Q 008154 258 ----LGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNG 333 (576)
Q Consensus 258 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~v 333 (576)
++++...+....... + ...+.+||++.++..||.|++||+.+++.. ...++. +...+.....++..
T Consensus 228 ~~~~~gl~~~~~~~~~~~~-------~-~~~~~vnm~~lai~~S~~vngVS~lh~~v~-~~l~~~-l~~~~~~~~~~i~g 297 (601)
T TIGR02094 228 YAANLGLPREQLLALGREN-------P-DDPEPFNMTVLALRLSRIANGVSKLHGEVS-RKMWQF-LYPGYEEEEVPIGY 297 (601)
T ss_pred hhhHhCCCHHHHHhhhhhc-------c-CccCceeHHHHHHHhCCeeeeecHHHHHHH-HHHHHh-hhhhcccccCCccc
Confidence 455555543322211 1 113568999999999999999999988732 111111 23333444567999
Q ss_pred ecCCCCCCCCCCCCCccccccCCcCC----------------------cccchHhHHHHHH-------------------
Q 008154 334 ITNGIDITEWNPSSDEHIASHYSIDD----------------------LSGKVQCKIALQK------------------- 372 (576)
Q Consensus 334 i~nGvd~~~~~~~~~~~l~~~~~~~~----------------------~~~~~~~~~~~~~------------------- 372 (576)
|+||||...|.|+....++.+|.+++ |..+..++..+.+
T Consensus 298 ItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~ 377 (601)
T TIGR02094 298 VTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAI 377 (601)
T ss_pred eeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchh
Confidence 99999999999999999999999988 4677888877777
Q ss_pred --HcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCChh------hHHHHHHHHHH--hc
Q 008154 373 --ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDPQ------FESWMRDTEAT--YK 436 (576)
Q Consensus 373 --~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~~~------~~~~~~~~~~~--~~ 436 (576)
..|++.+++.+++++++||..+||+++++++++++.+ .++++||+|+|+|. .......+++. .+
T Consensus 378 ~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~ 457 (601)
T TIGR02094 378 LMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFR 457 (601)
T ss_pred hhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCC
Confidence 4566667899999999999999999999999999863 58999999999876 55556666665 67
Q ss_pred CceEEEccCChhHHHHHHhcCCEEEe-CCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe
Q 008154 437 DKYRGWVGFNVPISHRITAGCDILLM-PSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 514 (576)
Q Consensus 437 ~~~~~~~~~~~~~~~~ll~~~Dv~v~-ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~ 514 (576)
++++++++|+..+++.++++||+|++ ||+ +|+||++.|.||.+|.+.+++.+||+.|... +.|||.|
T Consensus 458 ~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~~-----------~~nGf~f 526 (601)
T TIGR02094 458 GRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGYD-----------GDNGWAI 526 (601)
T ss_pred CCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccCC-----------CCcEEEE
Confidence 89999999999999999999999999 998 9999999999999999999999999999984 5899999
Q ss_pred CC------------CCHHHHHHHHHHHH-HHhhhC-----HHHHHHHHHHHHhh---hCCHHHHHHHHHHHH
Q 008154 515 LP------------LSEESMLTALRFAI-RTYREH-----KSSWEGLMRRGMEK---DYTWENAAIQYEQVF 565 (576)
Q Consensus 515 ~~------------~d~~~la~~i~~~l-~~~~~~-----~~~~~~~~~~a~~~---~fs~~~~~~~y~~~y 565 (576)
.+ .|++++.++|++.+ ..++++ |..|.++++++|++ .|||++|+++|.+.|
T Consensus 527 ~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 527 GDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred CCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 84 78999999999988 555554 66799999999987 799999999999987
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-56 Score=491.29 Aligned_cols=446 Identities=35% Similarity=0.527 Sum_probs=349.6
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCee
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQ 138 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (576)
.....++|||+|+|+|+.|+.++||++.+++.|+++|+++||+|.||+|.|+..... ...+... ...+.....
T Consensus 581 ~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~-----~~~~~~~--~~~~~~~~~ 653 (1036)
T PLN02316 581 GIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLS-----HVKDLHY--QRSYSWGGT 653 (1036)
T ss_pred CCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchh-----hcccceE--EEEeccCCE
Confidence 444467899999999999998999999999999999999999999999999752110 0000111 112222334
Q ss_pred EEEEEEeeecCeEEEEecCCC-CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccch
Q 008154 139 EIAFFHEYREGVDWVFVDHPS-YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL 217 (576)
Q Consensus 139 ~~~~~~~~~~gv~v~~l~~~~-~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~ 217 (576)
.++++...++||++|+++++. +..+..+|+ |.|+..||.+|+.++++.+...+. +|||||+|+|++++
T Consensus 654 ~~~v~~~~~~GV~vyfl~~~~~~F~r~~~Yg-----~~Dd~~RF~~F~~Aale~l~~~~~------~PDIIHaHDW~tal 722 (1036)
T PLN02316 654 EIKVWFGKVEGLSVYFLEPQNGMFWAGCVYG-----CRNDGERFGFFCHAALEFLLQSGF------HPDIIHCHDWSSAP 722 (1036)
T ss_pred EEEEEEEEECCcEEEEEeccccccCCCCCCC-----chhHHHHHHHHHHHHHHHHHhcCC------CCCEEEECCChHHH
Confidence 678889899999999999753 444455775 358999999999999998876542 89999999999999
Q ss_pred HHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhc
Q 008154 218 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297 (576)
Q Consensus 218 ~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 297 (576)
++.+++......+ ..++|+|+|+|+..++ .++.+.++..|
T Consensus 723 va~llk~~~~~~~-~~~~p~V~TiHnl~~~---------------------------------------~n~lk~~l~~A 762 (1036)
T PLN02316 723 VAWLFKDHYAHYG-LSKARVVFTIHNLEFG---------------------------------------ANHIGKAMAYA 762 (1036)
T ss_pred HHHHHHHhhhhhc-cCCCCEEEEeCCcccc---------------------------------------hhHHHHHHHHC
Confidence 9998876543222 2568999999975321 12345678899
Q ss_pred cceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCc-ccchHhHHHHHHHcCC
Q 008154 298 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL-SGKVQCKIALQKELGL 376 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i 376 (576)
|.|++||+.+++++.. ...+.....++.+|+||||++.|.|.....+..+|...++ .++..++..+++.+|+
T Consensus 763 D~ViTVS~tya~EI~~-------~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL 835 (1036)
T PLN02316 763 DKATTVSPTYSREVSG-------NSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGL 835 (1036)
T ss_pred CEEEeCCHHHHHHHHh-------ccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCC
Confidence 9999999999988753 1112333578999999999999998876666666766555 3566778889999999
Q ss_pred CCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCC-hhhHHHHHHHHHHh----cCceEEEccCChhHHH
Q 008154 377 PIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATY----KDKYRGWVGFNVPISH 451 (576)
Q Consensus 377 ~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 451 (576)
+. ++.++|+|+||+.++||+++|++|+.++.+++++|+|+|+|+ +.++..++.+...+ ..++.+..+++..+..
T Consensus 836 ~~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah 914 (1036)
T PLN02316 836 KQ-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSH 914 (1036)
T ss_pred Cc-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHH
Confidence 83 367899999999999999999999999877789999999984 22344444444433 3567777778877777
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccC---CCCCcceeEeCCCCHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFARE---GSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~---~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
.+|++||++|+||++|+||++.||||+||+|+|++++||.+|.|.+.+..... ...+.||+++++.|+++++.+|.+
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~r 994 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNR 994 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999874321100 001369999999999999999999
Q ss_pred HHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 529 AIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 529 ~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
++..+.+.+..+.+++++++.+.|||++++++|+++|+.+.+
T Consensus 995 aL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~~ 1036 (1036)
T PLN02316 995 AISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSARK 1036 (1036)
T ss_pred HHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhC
Confidence 998765567777889999899999999999999999998753
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-55 Score=450.72 Aligned_cols=481 Identities=38% Similarity=0.607 Sum_probs=409.8
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++.|..|++++||++-+++.+.++|.+.|++|.|+.|.|+.-+ ..+++.+.......+...+.....-+...
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQ---KEWRDLLKVVGKFGVLKGGRAQLFIVKEY 77 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhh---hhhccccceeeEeeeeecccceEEEEEee
Confidence 899999999999999999999999999999999999999999997422 23333322223333334344434433333
Q ss_pred eecC-eEEEEecCCCCCCC--CCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 146 YREG-VDWVFVDHPSYHRP--GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 146 ~~~g-v~v~~l~~~~~~~~--~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
..++ +++++++++.+..+ ...|+ |.|+.+||+.|+.++++.+....+. + .|||||+||||+++++.++
T Consensus 78 ~~~~~v~~~lid~~~~f~r~~~~~~~-----~~d~~~Rf~~F~~a~~~~~~~~~~~-~---~pDIvH~hDWqt~L~~~~l 148 (487)
T COG0297 78 GKDGGVDLYLIDNPALFKRPDSTLYG-----YYDNAERFAFFSLAAAELAPLGLIS-W---LPDIVHAHDWQTGLLPAYL 148 (487)
T ss_pred cccCCCcEEEecChhhcCccccccCC-----CCcHHHHHHHHHHHHHHHhhhcCCC-C---CCCEEEeecHHHHHHHHHH
Confidence 3233 99999998876554 23443 4599999999999999987655543 4 7999999999999999999
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
+.... ....+|+|||+|+..++|.|+......++++...+....-. +....+++|..+..||.|++
T Consensus 149 k~~~~---~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~-----------~~~~~~~lK~gi~~ad~vtt 214 (487)
T COG0297 149 KQRYR---SGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLE-----------FYGQISFLKGGLYYADAVTT 214 (487)
T ss_pred hhccc---ccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceee-----------ecCcchhhhhhheeccEEEE
Confidence 98631 01568999999999999999966668899987666521111 13557899999999999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
||+.+++++.++.+++++++.+.....++..|.||+|...|.|.....+..+|....|.++..++..++..+|++.+.+.
T Consensus 215 VSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~ 294 (487)
T COG0297 215 VSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPG 294 (487)
T ss_pred ECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999998888999999999999999999998888899999998899999999999999977788
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
++++++||+..+||++++++++..+.+..+++++.|.|++.++.....+++..+.++....++++++++.+++++|++++
T Consensus 295 pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lm 374 (487)
T COG0297 295 PLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILM 374 (487)
T ss_pred cEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEe
Confidence 99999999999999999999999999988999999999989999999999988888888999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
||++||||++-|+||..|+++|+..+||..|.|.+.+... .++..+|+.+.+.++++++.+|.+++..+..++..|+.
T Consensus 375 PSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~ 452 (487)
T COG0297 375 PSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRK 452 (487)
T ss_pred CCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchh--ccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 9999999999999999999999999999999999865442 23468999999999999999999999887666666999
Q ss_pred HHHHHHhhhCCHHHHHHHHHHHHHHhhhCCCC
Q 008154 543 LMRRGMEKDYTWENAAIQYEQVFEWASIDPPY 574 (576)
Q Consensus 543 ~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~~~ 574 (576)
+.++++...|+|+..+.+|.+.|+.++..+-.
T Consensus 453 ~~~~~m~~d~sw~~sa~~y~~lY~~~~~~~~~ 484 (487)
T COG0297 453 VQPNAMGADFSWDLSAKEYVELYKPLLSKPFW 484 (487)
T ss_pred HHHhhcccccCchhHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999876543
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=341.61 Aligned_cols=455 Identities=16% Similarity=0.160 Sum_probs=280.9
Q ss_pred EEEEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEecCCCCCCcccchhccccC--ce-eEEEeecCCeeEEEEE
Q 008154 68 IVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTAADENFTLAKDL--GC-CMKICCFGGEQEIAFF 143 (576)
Q Consensus 68 I~~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 143 (576)
+..+|+|.++ ++||+.+++..-|+.+++ .|.+..+|||..++... ..++..... .. ...-....+++.++++
T Consensus 4 lfE~swEV~N--KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~--~e~e~~~~~~~~~~~~~~~~~~~g~~v~~G 79 (590)
T cd03793 4 LFEVAWEVAN--KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKAR--TEVEILEPPNPALRQALDRMRSRGIKVHFG 79 (590)
T ss_pred EEEEeehhhc--cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccC--CccccCCCCchHHHHHHHHHHhCCCeEEEe
Confidence 7889999998 699999999999999998 79999999998764221 112111110 00 0001223567888999
Q ss_pred EeeecC-eEEEEecCCC-CCCCCCCCCCCC-----------CCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEe
Q 008154 144 HEYREG-VDWVFVDHPS-YHRPGNPYGDIN-----------GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLV 210 (576)
Q Consensus 144 ~~~~~g-v~v~~l~~~~-~~~~~~~y~~~~-----------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~ 210 (576)
+|.++| +.++++|..+ +...+++++..| ++| ++...|.++...+++.+...- . ..++||+|+
T Consensus 80 rW~i~G~P~viL~D~~~~~~~~~~~~~~lW~~~~i~s~~~~~d~-nea~~fgy~~~~~i~~~~~~~-~---~~~~dViH~ 154 (590)
T cd03793 80 RWLIEGYPKVVLFDIGSAAWKLDEWKGELWELCGIGSPEGDRET-NDAIIFGFLVAWFLGEFAEQF-D---DEPAVVAHF 154 (590)
T ss_pred EEEcCCCCeEEEEeCchhhhhHHHHHHHHHHHcCCCCCCCCCcc-hHHHHHHHHHHHHHHHHHhhc-c---CCCCeEEEE
Confidence 999998 8888998544 333444554444 455 556667777776666554331 1 126899999
Q ss_pred CCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhh-cCCChhhhcccccccccccccccCCcCccchh
Q 008154 211 NDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKN-LGLPSEWYGALEWVFPTWARTHALDTGEAVNV 289 (576)
Q Consensus 211 ~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (576)
|||+++.....++++. +.+|+|||+|++.. |+ .+... .++... +......- ..++ ..-.....+
T Consensus 155 HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~-GR---~l~~g~~~~y~~-l~~~~~d~-eA~~---~~I~~r~~i 219 (590)
T cd03793 155 HEWQAGVGLPLLRKRK------VDVSTIFTTHATLL-GR---YLCAGNVDFYNN-LDYFDVDK-EAGK---RGIYHRYCI 219 (590)
T ss_pred cchhHhHHHHHHHHhC------CCCCEEEEeccccc-cc---ccccCCcccchh-hhhcchhh-hhhc---ccchHHHHH
Confidence 9999999988888654 68999999998741 11 00000 000000 00000000 0000 001233468
Q ss_pred HHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHh---
Q 008154 290 LKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC--- 366 (576)
Q Consensus 290 ~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~--- 366 (576)
|+.+.+.||++++||+.++.++. .+++.++++ |||||+|...|.+.... ....-.++..-
T Consensus 220 E~~aa~~Ad~fttVS~it~~E~~---------~Ll~~~pd~--ViPNGid~~~f~~~~e~------~~~~~~~k~ki~~f 282 (590)
T cd03793 220 ERAAAHCAHVFTTVSEITAYEAE---------HLLKRKPDV--VLPNGLNVKKFSALHEF------QNLHAQSKEKINEF 282 (590)
T ss_pred HHHHHhhCCEEEECChHHHHHHH---------HHhCCCCCE--EeCCCcchhhcccchhh------hhhhHHhhhhhhHH
Confidence 99999999999999999999974 466777775 99999999988765321 00000011111
Q ss_pred -HHHHHHHcCCCCCCCCCEEEE-eccccc-ccCHHHHHHHHHhhhc------CC---cEEEEE-eCCC----------hh
Q 008154 367 -KIALQKELGLPIRPDCPLIGF-IGRLDY-QKGIDLIRLAAPEILA------DD---IQFVML-GSGD----------PQ 423 (576)
Q Consensus 367 -~~~~~~~~~i~~~~~~~~i~~-~Gr~~~-~Kg~~~ll~a~~~L~~------~~---~~lii~-G~g~----------~~ 423 (576)
+..++..++++ ++..+++| +||++. +||++.||+|+.+|.. .+ +-|+|+ +... +-
T Consensus 283 ~~~~~~~~~~~~--~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~ 360 (590)
T cd03793 283 VRGHFYGHYDFD--LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAV 360 (590)
T ss_pred HHHHHhhhcCCC--CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHH
Confidence 12345556665 45566666 899997 9999999999999865 12 233332 2210 10
Q ss_pred ---hHHHHHHH----HHH--------------------------------------------------------------
Q 008154 424 ---FESWMRDT----EAT-------------------------------------------------------------- 434 (576)
Q Consensus 424 ---~~~~~~~~----~~~-------------------------------------------------------------- 434 (576)
..+....+ .++
T Consensus 361 ~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l 440 (590)
T cd03793 361 RKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQL 440 (590)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcC
Confidence 00011110 000
Q ss_pred -----hcCceEEEccC---Ch----hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccc
Q 008154 435 -----YKDKYRGWVGF---NV----PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFA 502 (576)
Q Consensus 435 -----~~~~~~~~~~~---~~----~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~ 502 (576)
.++++++...| .+ .....++++||++|+||++|+||++++||||||+|+|+|+.+|+.+++.+...
T Consensus 441 ~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~-- 518 (590)
T cd03793 441 FNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIE-- 518 (590)
T ss_pred cCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhc--
Confidence 01223333222 11 11336789999999999999999999999999999999999999655553110
Q ss_pred cCCCCCcceeEeCCCC---HHHHHHHHHHHHHHhhhCHHHHHHHHHHH----HhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 503 REGSGEGTGWSFLPLS---EESMLTALRFAIRTYREHKSSWEGLMRRG----MEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 503 ~~~~~~~~G~~~~~~d---~~~la~~i~~~l~~~~~~~~~~~~~~~~a----~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
+++..|+.+.+.+ ..+-++.|.+.+..+.+ .+.++++..+. .++.|+|++++..|.++|+.++++
T Consensus 519 ---~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~-~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~~ 590 (590)
T cd03793 519 ---DPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQ-LSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALSR 590 (590)
T ss_pred ---cCCCceEEEecCCccchHHHHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhC
Confidence 0124577775332 23334444444544432 23344444332 467899999999999999988753
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=333.58 Aligned_cols=391 Identities=19% Similarity=0.180 Sum_probs=251.5
Q ss_pred ccCcHHHHHhhHHHHHHhCCC--cEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecC
Q 008154 80 KTGGLGDVCGSLPVALAARGH--RVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDH 157 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~--~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~ 157 (576)
..||+++++.+++++|+++|| +|+|+|..++.+...+. +.. .++...+|+++++++.
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~-~~~--------------------~~~~~~~gv~v~r~~~ 82 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPD-YAQ--------------------PIERIAPGARIVRLPF 82 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCc-cCC--------------------CeeEeCCCcEEEEecC
Confidence 379999999999999999997 99999977654321110 000 1123347899999863
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcE
Q 008154 158 PSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARS 237 (576)
Q Consensus 158 ~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 237 (576)
.+.. +... .+....+..+...+.+.++..+ .+|||||+|.+.++++..+++.. .++|+
T Consensus 83 ~~~~-----~~~~----~~~~~~~~~~~~~l~~~~~~~~------~~~DvIH~h~~~~~~~~~~~~~~-------~~~p~ 140 (439)
T TIGR02472 83 GPRR-----YLRK----ELLWPYLDELADNLLQHLRQQG------HLPDLIHAHYADAGYVGARLSRL-------LGVPL 140 (439)
T ss_pred CCCC-----CcCh----hhhhhhHHHHHHHHHHHHHHcC------CCCCEEEEcchhHHHHHHHHHHH-------hCCCE
Confidence 2211 1000 0001111223333333333221 16999999998877776666553 46899
Q ss_pred EEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCC
Q 008154 238 ILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGG 317 (576)
Q Consensus 238 v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~ 317 (576)
|+|.|+..... .......+.....+.. + +.....+.+++.+++.+|.++++|+....+..
T Consensus 141 V~t~H~~~~~~---~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~----- 200 (439)
T TIGR02472 141 IFTGHSLGREK---RRRLLAAGLKPQQIEK----Q--------YNISRRIEAEEETLAHASLVITSTHQEIEEQY----- 200 (439)
T ss_pred EEecccccchh---hhhcccCCCChhhhhh----h--------cchHHHHHHHHHHHHhCCEEEECCHHHHHHHH-----
Confidence 99999752110 0000000111111000 0 00012234577889999999999864332210
Q ss_pred cchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCH
Q 008154 318 YGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGI 397 (576)
Q Consensus 318 ~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~ 397 (576)
......+..++.+||||||.+.|.+..... .....+... +..+.+ ++..+|+|+||+.+.||+
T Consensus 201 ---~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~-----------~~~~~~~~~-~~~~~~--~~~~~i~~vGrl~~~Kg~ 263 (439)
T TIGR02472 201 ---ALYDSYQPERMQVIPPGVDLSRFYPPQSSE-----------ETSEIDNLL-APFLKD--PEKPPILAISRPDRRKNI 263 (439)
T ss_pred ---HhccCCCccceEEECCCcChhhcCCCCccc-----------cchhHHHHH-Hhhccc--cCCcEEEEEcCCcccCCH
Confidence 011124567899999999998887643210 001111122 233333 467899999999999999
Q ss_pred HHHHHHHHhhhc--CCcEEE-EEeCCChh--hHH----H----HHHHHH-HhcCceEEEccC-ChhHHHHHHhcC----C
Q 008154 398 DLIRLAAPEILA--DDIQFV-MLGSGDPQ--FES----W----MRDTEA-TYKDKYRGWVGF-NVPISHRITAGC----D 458 (576)
Q Consensus 398 ~~ll~a~~~L~~--~~~~li-i~G~g~~~--~~~----~----~~~~~~-~~~~~~~~~~~~-~~~~~~~ll~~~----D 458 (576)
+.|++|++++.. +..+++ ++|+++.. .+. . .+.+.+ .+.+++. +.++ +.+.+..+|+.+ |
T Consensus 264 ~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~-f~g~~~~~~~~~~~~~a~~~~D 342 (439)
T TIGR02472 264 PSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVA-YPKHHRPDDVPELYRLAARSRG 342 (439)
T ss_pred HHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEE-ecCCCCHHHHHHHHHHHhhcCC
Confidence 999999986422 234443 56877421 111 1 111111 1334444 4443 455666888866 9
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 538 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~ 538 (576)
++|+||.+|+||++++||||||+|||+|+.||..|++.+ +.+|++++++|+++++++|.+++. |++
T Consensus 343 v~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~----------~~~G~lv~~~d~~~la~~i~~ll~----~~~ 408 (439)
T TIGR02472 343 IFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIAN----------CRNGLLVDVLDLEAIASALEDALS----DSS 408 (439)
T ss_pred EEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC----------CCcEEEeCCCCHHHHHHHHHHHHh----CHH
Confidence 999999999999999999999999999999999999988 899999999999999999999976 788
Q ss_pred HHHHHHHHH---HhhhCCHHHHHHHHHHHH
Q 008154 539 SWEGLMRRG---MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 539 ~~~~~~~~a---~~~~fs~~~~~~~y~~~y 565 (576)
.+.++++++ +.++|||++++++|.+++
T Consensus 409 ~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 409 QWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 888888877 457899999999999875
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=331.09 Aligned_cols=386 Identities=18% Similarity=0.207 Sum_probs=266.4
Q ss_pred EEEEeeccCCcc-----ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEE
Q 008154 68 IVFVTAEAAPYS-----KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 142 (576)
Q Consensus 68 I~~~s~e~~P~~-----~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (576)
|++++....|.. ..||+++++.+++++|+++||+|+++++....... ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~--~~------------------------ 54 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQP--PV------------------------ 54 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCC--Cc------------------------
Confidence 566777666631 26999999999999999999999999976432110 00
Q ss_pred EEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH-hhcccCCCCCCCCCCccEEEeCCCccchHHHH
Q 008154 143 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAAC-EAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 221 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~ 221 (576)
....+|++++.++..++... +. ......+..+....+ ..+... ..+|||||+|.+.+++.+.+
T Consensus 55 -~~~~~~~~v~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~------~~~~Diih~h~~~~~~~~~~ 118 (405)
T TIGR03449 55 -VEVAPGVRVRNVVAGPYEGL----DK-----EDLPTQLCAFTGGVLRAEARHE------PGYYDLIHSHYWLSGQVGWL 118 (405)
T ss_pred -cccCCCcEEEEecCCCcccC----CH-----HHHHHHHHHHHHHHHHHHhhcc------CCCCCeEEechHHHHHHHHH
Confidence 11235788887754332210 00 000011111222222 222211 11799999999777666666
Q ss_pred HHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhcccee
Q 008154 222 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 301 (576)
Q Consensus 222 l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~ 301 (576)
+++. .++|+|+|.|+.... .. .++... ..... ......++..++.+|.++
T Consensus 119 ~~~~-------~~~p~v~t~h~~~~~-----~~-~~~~~~-~~~~~----------------~~~~~~e~~~~~~~d~vi 168 (405)
T TIGR03449 119 LRDR-------WGVPLVHTAHTLAAV-----KN-AALADG-DTPEP----------------EARRIGEQQLVDNADRLI 168 (405)
T ss_pred HHHh-------cCCCEEEeccchHHH-----HH-HhccCC-CCCch----------------HHHHHHHHHHHHhcCeEE
Confidence 5543 468999999975210 00 000000 00000 000123456788999999
Q ss_pred ccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCC
Q 008154 302 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 381 (576)
Q Consensus 302 ~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (576)
++|+...+.+. ..+.....++.+||||+|.+.|.+.. ....++.++++ ++
T Consensus 169 ~~s~~~~~~~~---------~~~~~~~~ki~vi~ngvd~~~~~~~~-------------------~~~~~~~~~~~--~~ 218 (405)
T TIGR03449 169 ANTDEEARDLV---------RHYDADPDRIDVVAPGADLERFRPGD-------------------RATERARLGLP--LD 218 (405)
T ss_pred ECCHHHHHHHH---------HHcCCChhhEEEECCCcCHHHcCCCc-------------------HHHHHHhcCCC--CC
Confidence 99998776653 22344567899999999988876543 33456677776 56
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhc--CC--cEEEEEeCCC----hhhHHHHHHHHHH-hcCceEEEccC-ChhHHH
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DD--IQFVMLGSGD----PQFESWMRDTEAT-YKDKYRGWVGF-NVPISH 451 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~--~~lii~G~g~----~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~ 451 (576)
.++|+|+||+.+.||++.+++|+.++.+ ++ ++|+|+|.++ +..++..+.+.+. ...++. +.++ +.+...
T Consensus 219 ~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~-~~g~~~~~~~~ 297 (405)
T TIGR03449 219 TKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVR-FLPPRPPEELV 297 (405)
T ss_pred CcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEE-ECCCCCHHHHH
Confidence 7899999999999999999999999865 34 9999999642 2223333333332 223444 4454 556677
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.+++.||++++||..|++|++++|||++|+|||+++.|+..|.+.+ +.+|++++++|+++++++|.+++.
T Consensus 298 ~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~----------~~~g~~~~~~d~~~la~~i~~~l~ 367 (405)
T TIGR03449 298 HVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVAD----------GETGLLVDGHDPADWADALARLLD 367 (405)
T ss_pred HHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhcc----------CCceEECCCCCHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999988 899999999999999999999875
Q ss_pred HhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhh
Q 008154 532 TYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+++.+.+++.++ ..++|||++++++|.++|.+++.
T Consensus 368 ----~~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 368 ----DPRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred ----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 777888887776 34689999999999999998764
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=345.44 Aligned_cols=450 Identities=14% Similarity=0.095 Sum_probs=282.6
Q ss_pred hhccCCCceEEEEeeccCC---------ccccCcHHHHHhhHHHHHHhCC--CcEEEEEecCCCCCCcccchhccccCce
Q 008154 59 KAQTRVSYNIVFVTAEAAP---------YSKTGGLGDVCGSLPVALAARG--HRVMVVSPRYFNGTAADENFTLAKDLGC 127 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P---------~~~~GG~~~~~~~la~~l~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~ 127 (576)
....+++|.|+++|...+| ..-.||..+|+.+||++|+++| |+|.++|-......... .|.+..+...
T Consensus 163 ~~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~-~y~~p~e~~~ 241 (1050)
T TIGR02468 163 DQQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDW-SYGEPTEMLT 241 (1050)
T ss_pred hhcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCcccccc-ccCCcccccc
Confidence 3344568999999987443 1347999999999999999998 89999996543211111 1111110000
Q ss_pred eEEEeecCCeeEEEEEEeeecCeEEEEecCCCC---CCCCCCCCCCCCCCCchHHHHHHHHHHHHhhccc----CCCC--
Q 008154 128 CMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY---HRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLV----LPLG-- 198 (576)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~---~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~----~~~~-- 198 (576)
+.............+|+++++++..+. .++..++ -.+.-|...+.+.+.+ ++..
T Consensus 242 ------~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~-----------~~l~ef~d~~l~~~~~~~~~~~~~~~ 304 (1050)
T TIGR02468 242 ------PRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELW-----------PYIPEFVDGALSHIVNMSKVLGEQIG 304 (1050)
T ss_pred ------ccccccccccccCCCCeEEEEeccCCCCCCcCHHHHH-----------HHHHHHHHHHHHHHHhhhhhhhhhhc
Confidence 000000000011236899999984432 2221111 1223333333333221 1100
Q ss_pred CCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhc---CC-Chhhhccccccccc
Q 008154 199 GFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNL---GL-PSEWYGALEWVFPT 274 (576)
Q Consensus 199 ~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~ 274 (576)
.-....|||||+|.|.++.++..++.. .++|+|+|.|++... ..+.+ |. +..... .
T Consensus 305 ~~~~~~pDvIHaHyw~sG~aa~~L~~~-------lgVP~V~T~HSLgr~------K~~~ll~~g~~~~~~~~---~---- 364 (1050)
T TIGR02468 305 SGHPVWPYVIHGHYADAGDSAALLSGA-------LNVPMVLTGHSLGRD------KLEQLLKQGRMSKEEIN---S---- 364 (1050)
T ss_pred cccCCCCCEEEECcchHHHHHHHHHHh-------hCCCEEEECccchhh------hhhhhcccccccccccc---c----
Confidence 000114999999999999998888875 479999999986311 11100 10 000000 0
Q ss_pred ccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCC---cchhhh-----------hhccCCceeEecCCCCC
Q 008154 275 WARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGG---YGLHEI-----------LSSRKSVLNGITNGIDI 340 (576)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~---~~l~~~-----------~~~~~~~i~vi~nGvd~ 340 (576)
.+.....+..+..+++.||.|+++|+...+++..- ++ ..|... ++....++.|||||||+
T Consensus 365 -----~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~l-Y~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~ 438 (1050)
T TIGR02468 365 -----TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGL-YDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEF 438 (1050)
T ss_pred -----ccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHH-hccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcH
Confidence 00112445678899999999999999887764221 10 000000 11224589999999999
Q ss_pred CCCCCCCCccccccCCcC-Cc--ccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc----CCcE
Q 008154 341 TEWNPSSDEHIASHYSID-DL--SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA----DDIQ 413 (576)
Q Consensus 341 ~~~~~~~~~~l~~~~~~~-~~--~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~----~~~~ 413 (576)
..|.|.....--. -.+. .. .........+++.+. + ++.++|+|+||+.+.||++.||+|+..+.. .++.
T Consensus 439 ~~F~P~~~~~~~~-~~~~~~~~~~~~~~~~~~l~r~~~-~--pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~ 514 (1050)
T TIGR02468 439 SHIVPHDGDMDGE-TEGNEEHPAKPDPPIWSEIMRFFT-N--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT 514 (1050)
T ss_pred HHccCCCccccch-hcccccccccccchhhHHHHhhcc-c--CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE
Confidence 9998864321000 0000 00 000001112333332 3 577899999999999999999999999864 2454
Q ss_pred EEEEeCCChh----------hHHHHHHHHHH-hcCceEEEccC-ChhHHHHHHhcC----CEEEeCCCCCCCcHHHHHHH
Q 008154 414 FVMLGSGDPQ----------FESWMRDTEAT-YKDKYRGWVGF-NVPISHRITAGC----DILLMPSRFEPCGLNQLYAM 477 (576)
Q Consensus 414 lii~G~g~~~----------~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~ll~~~----Dv~v~ps~~E~~g~s~lEAm 477 (576)
+|+|.++.. .....+.+.+. +.+++. +.++ +.+.+..+|+.| |+||+||.+|+||++++|||
T Consensus 515 -LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAM 592 (1050)
T TIGR02468 515 -LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 592 (1050)
T ss_pred -EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHH
Confidence 467876421 11222222221 233444 4554 455666888877 69999999999999999999
Q ss_pred HcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHH
Q 008154 478 RYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWE 555 (576)
Q Consensus 478 a~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~ 555 (576)
|||+|||+|+.||..|++.+ +.+|+++++.|+++++++|.+++. |++.+.++++++. .++|+|+
T Consensus 593 AcGlPVVASdvGG~~EII~~----------g~nGlLVdP~D~eaLA~AL~~LL~----Dpelr~~m~~~gr~~v~~FSWe 658 (1050)
T TIGR02468 593 AHGLPMVATKNGGPVDIHRV----------LDNGLLVDPHDQQAIADALLKLVA----DKQLWAECRQNGLKNIHLFSWP 658 (1050)
T ss_pred HhCCCEEEeCCCCcHHHhcc----------CCcEEEECCCCHHHHHHHHHHHhh----CHHHHHHHHHHHHHHHHHCCHH
Confidence 99999999999999999998 899999999999999999999885 8899999998873 4589999
Q ss_pred HHHHHHHHHHHHhhhCC
Q 008154 556 NAAIQYEQVFEWASIDP 572 (576)
Q Consensus 556 ~~~~~y~~~y~~~~~~~ 572 (576)
+++++|++.+..+...+
T Consensus 659 ~ia~~yl~~i~~~~~~~ 675 (1050)
T TIGR02468 659 EHCKTYLSRIASCRPRH 675 (1050)
T ss_pred HHHHHHHHHHHHHhccC
Confidence 99999999998876544
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=327.05 Aligned_cols=391 Identities=19% Similarity=0.178 Sum_probs=268.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec--CCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR--YFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
|||++++..++|. .||.+.++.+++++|+++||+|+|+|+. |+.+..... +. ....-
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~-~~------------------~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEG-YS------------------AWRYR 59 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcc-cc------------------cccce
Confidence 7999999998884 7999999999999999999999999964 332211000 00 00001
Q ss_pred EeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHHhh-cccCCCCCCCCCCccEEEeCCCccc--h
Q 008154 144 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEA-PLVLPLGGFTYGEKCIFLVNDWHAG--L 217 (576)
Q Consensus 144 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~-~~~~~~~~~~~~~pDVvH~~~~~~~--~ 217 (576)
.+..+|+++++++....... ....+. ..+....... .+.. . .+|||||+|.+... .
T Consensus 60 ~~~~~~i~v~r~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~Div~~~~p~~~~~~ 121 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQP------------SGLKRLLHLGSFALSSFFPLLAQR---R---WRPDRVIGVVPTLFCAP 121 (412)
T ss_pred eeecCCeEEEEccccCCCCc------------cHHHHHHHHHHHHHHHHHHHhhcc---C---CCCCEEEEeCCcHHHHH
Confidence 22347888888863211100 111122 1111111111 1111 1 27999999975432 2
Q ss_pred HHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCC-hhhhcccccccccccccccCCcCccchhHHHHHHh
Q 008154 218 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP-SEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVT 296 (576)
Q Consensus 218 ~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 296 (576)
...++++. .++|+|+++|+.. +.... ..+.. ...+... ...+++.+++.
T Consensus 122 ~~~~~~~~-------~~~~~v~~~~d~~-----~~~~~-~~~~~~~~~~~~~-----------------~~~~~~~~~~~ 171 (412)
T PRK10307 122 GARLLARL-------SGARTWLHIQDYE-----VDAAF-GLGLLKGGKVARL-----------------ATAFERSLLRR 171 (412)
T ss_pred HHHHHHHh-------hCCCEEEEeccCC-----HHHHH-HhCCccCcHHHHH-----------------HHHHHHHHHhh
Confidence 23333332 4689999999742 22211 11211 0111000 01367788899
Q ss_pred ccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCC
Q 008154 297 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGL 376 (576)
Q Consensus 297 ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 376 (576)
||.++++|+...+.+.+ ......++.+||||+|.+.|.+.... ....+++.+++
T Consensus 172 ad~ii~~S~~~~~~~~~----------~~~~~~~i~vi~ngvd~~~~~~~~~~----------------~~~~~~~~~~~ 225 (412)
T PRK10307 172 FDNVSTISRSMMNKARE----------KGVAAEKVIFFPNWSEVARFQPVADA----------------DVDALRAQLGL 225 (412)
T ss_pred CCEEEecCHHHHHHHHH----------cCCCcccEEEECCCcCHhhcCCCCcc----------------chHHHHHHcCC
Confidence 99999999998877632 13346689999999998887654321 02346777887
Q ss_pred CCCCCCCEEEEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHH
Q 008154 377 PIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRIT 454 (576)
Q Consensus 377 ~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll 454 (576)
+ ++.++++|+||+.+.||++.|++|++++.+ ++++|+|+|+|+ ..++..+.+++....++. +.|+ +.+.+..++
T Consensus 226 ~--~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~-~~~~l~~~~~~~~l~~v~-f~G~~~~~~~~~~~ 301 (412)
T PRK10307 226 P--DGKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG-GKARLEKMAQCRGLPNVH-FLPLQPYDRLPALL 301 (412)
T ss_pred C--CCCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh-hHHHHHHHHHHcCCCceE-EeCCCCHHHHHHHH
Confidence 7 567899999999999999999999998865 579999999995 233433344432223554 4454 566777899
Q ss_pred hcCCEEEeCCCCCC----CcHHHHHHHHcCCceEEeCcccc--ccccccccccccCCCCCcceeEeCCCCHHHHHHHHHH
Q 008154 455 AGCDILLMPSRFEP----CGLNQLYAMRYGTIPVVHATGGL--RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 455 ~~~Dv~v~ps~~E~----~g~s~lEAma~G~pvIat~~gg~--~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
+.||++++||..|+ ++.+++|||+||+|||+|+.||. .|.+. ++|++++++|+++++++|.+
T Consensus 302 ~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~------------~~G~~~~~~d~~~la~~i~~ 369 (412)
T PRK10307 302 KMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE------------GIGVCVEPESVEALVAAIAA 369 (412)
T ss_pred HhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh------------CCcEEeCCCCHHHHHHHHHH
Confidence 99999999999997 56778999999999999998763 46553 48999999999999999998
Q ss_pred HHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 529 AIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 529 ~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
++. |++.+.+|++++ +.++|||++++++|.++|+++++.
T Consensus 370 l~~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 370 LAR----QALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHh----CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 875 788888888887 356899999999999999998865
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-38 Score=338.27 Aligned_cols=433 Identities=17% Similarity=0.160 Sum_probs=268.7
Q ss_pred CceEEEEeecc----CCc---cccCcHHHHHhhHHHHH--------HhCCC----cEEEEEecCCCCCCcccchhccccC
Q 008154 65 SYNIVFVTAEA----APY---SKTGGLGDVCGSLPVAL--------AARGH----RVMVVSPRYFNGTAADENFTLAKDL 125 (576)
Q Consensus 65 ~mkI~~~s~e~----~P~---~~~GG~~~~~~~la~~l--------~~~G~----~V~vi~~~~~~~~~~~~~~~~~~~~ 125 (576)
.|||+++|.+. .|. .-.||..+|+.++|++| +++|| +|.|+|-..+..... .+.+..+
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~--~~~~~~e- 331 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGT--TCNQRLE- 331 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccc--ccccccc-
Confidence 48999999986 221 12799999999999985 68999 677998654321100 0000000
Q ss_pred ceeEEEeecCCeeEEEEEEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHHhhcc-cCCCCCCC
Q 008154 126 GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEAPL-VLPLGGFT 201 (576)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~~-~~~~~~~~ 201 (576)
.....+++++++++..+... ... ..|..++.-+ ..++..+.+.+. ..+
T Consensus 332 -----------------~~~~~~~~~I~rvp~g~~~~--~~~----~~~i~k~~l~p~l~~f~~~~~~~~~~~~~----- 383 (784)
T TIGR02470 332 -----------------KVYGTEHAWILRVPFRTENG--IIL----RNWISRFEIWPYLETFAEDAEKEILAELQ----- 383 (784)
T ss_pred -----------------cccCCCceEEEEecCCCCcc--ccc----ccccCHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence 00112578888887332110 000 0012222222 233333333221 222
Q ss_pred CCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccC
Q 008154 202 YGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHAL 281 (576)
Q Consensus 202 ~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (576)
.+||+||+|.|.+++++..++.+ .++|.++|.|+...... ...+..... ....+
T Consensus 384 -~~pDlIHahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K~------~~~g~~~~~---~e~~~--------- 437 (784)
T TIGR02470 384 -GKPDLIIGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTKY------PDSDIYWQE---FEDKY--------- 437 (784)
T ss_pred -CCCCEEEECCCchHHHHHHHHHh-------cCCCEEEECCcchhhcc------ccccccccc---chhHH---------
Confidence 27999999999999998887765 57999999998732110 001110000 00000
Q ss_pred CcCccchhHHHHHHhccceeccCccchh----hhcc----ccCC-cchhhh---hhccCCceeEecCCCCCCCCCCCCCc
Q 008154 282 DTGEAVNVLKGAIVTADRLLTVSKGYSW----EITT----VEGG-YGLHEI---LSSRKSVLNGITNGIDITEWNPSSDE 349 (576)
Q Consensus 282 ~~~~~~~~~~~a~~~ad~v~~vS~~~~~----~~~~----~~~~-~~l~~~---~~~~~~~i~vi~nGvd~~~~~~~~~~ 349 (576)
....++.-+..+++.||.|++.|..... .+.. ..+. .+|.+. +.....|+.+||+|+|...|.|.+..
T Consensus 438 ~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~ 517 (784)
T TIGR02470 438 HFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDK 517 (784)
T ss_pred HhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCch
Confidence 0011223366888999999999963211 1100 0000 001111 12245689999999998888765432
Q ss_pred cccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCCh----h
Q 008154 350 HIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP----Q 423 (576)
Q Consensus 350 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~----~ 423 (576)
.-...-..+....-.-++...++.+|+..++++++|+++||+.+.||++.|++|+.++.. ++++|+|+|++.. .
T Consensus 518 ~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~ 597 (784)
T TIGR02470 518 EKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESK 597 (784)
T ss_pred hhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCccccccc
Confidence 100000000000000012334566777545788999999999999999999999987643 4789999998642 0
Q ss_pred h-H-----HHHHHHHHH--hcCceEEEccC--ChhHHHHHH---h-cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc
Q 008154 424 F-E-----SWMRDTEAT--YKDKYRGWVGF--NVPISHRIT---A-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 489 (576)
Q Consensus 424 ~-~-----~~~~~~~~~--~~~~~~~~~~~--~~~~~~~ll---~-~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g 489 (576)
. + +.+..+.+. +.+++. +.++ +......++ + ++|++|+||.+|+||++++||||||+|||+|+.|
T Consensus 598 d~ee~~~i~~L~~la~~~gL~g~V~-flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G 676 (784)
T TIGR02470 598 DREEQAEIEKMHNLIDQYQLHGQIR-WIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG 676 (784)
T ss_pred chhHHHHHHHHHHHHHHhCCCCeEE-EccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC
Confidence 1 1 111122222 234554 4443 222222333 3 5689999999999999999999999999999999
Q ss_pred ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---hhhCCHHHHHHHHHHHH
Q 008154 490 GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVF 565 (576)
Q Consensus 490 g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~---~~~fs~~~~~~~y~~~y 565 (576)
|..|++.+ +.+|+++++.|+++++++|.+++.....|++.|.+++++++ .++|||+++++++.++.
T Consensus 677 G~~EiV~d----------g~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 677 GPLEIIQD----------GVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CHHHHhcC----------CCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999998 89999999999999999999998766679999999999884 47899999999998765
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=322.52 Aligned_cols=372 Identities=22% Similarity=0.220 Sum_probs=258.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++..++|. ..||.++++.+++++|++. |+|.|++...+. .
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~---------------------------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQR---------------------------------F 45 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCch---------------------------------h
Confidence 8999999998884 4699999999999999987 777777643211 0
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
..++++++.+........ + . ..+..+......... ..+|||||+|.+.+++.+.+...
T Consensus 46 ~~~~~~~~~~~~~~~~~~---~--------~--~~~~~~~~~~~~~~~--------~~~~divh~~~~~~~~~~~~~~~- 103 (388)
T TIGR02149 46 DSEGLTVKGYRPWSELKE---A--------N--KALGTFSVDLAMAND--------PVDADVVHSHTWYTFLAGHLAKK- 103 (388)
T ss_pred cCCCeEEEEecChhhccc---h--------h--hhhhhhhHHHHHhhC--------CCCCCeEeecchhhhhHHHHHHH-
Confidence 113555554432110000 0 0 000111111111111 11689999999877665544332
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
. .++|+|+|.|+......+... ..+..... ...+++.+++.+|.++++|+
T Consensus 104 ~------~~~p~v~~~h~~~~~~~~~~~---~~~~~~~~---------------------~~~~~~~~~~~ad~vi~~S~ 153 (388)
T TIGR02149 104 L------YDKPLVVTAHSLEPLRPWKEE---QLGGGYKL---------------------SSWAEKTAIEAADRVIAVSG 153 (388)
T ss_pred h------cCCCEEEEeeccccccccccc---ccccchhH---------------------HHHHHHHHHhhCCEEEEccH
Confidence 2 579999999986321111000 00000000 01256778899999999999
Q ss_pred cchhhhccccCCcchhhhh-hccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 306 GYSWEITTVEGGYGLHEIL-SSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~-~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
.+.+.+.. .+ .....++.+||||+|...+.+.. ....+..++++ ++.++
T Consensus 154 ~~~~~~~~---------~~~~~~~~~i~vi~ng~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 203 (388)
T TIGR02149 154 GMREDILK---------YYPDLDPEKVHVIYNGIDTKEYKPDD-------------------GNVVLDRYGID--RSRPY 203 (388)
T ss_pred HHHHHHHH---------HcCCCCcceEEEecCCCChhhcCCCc-------------------hHHHHHHhCCC--CCceE
Confidence 88876532 22 23456899999999988776543 34566777876 56789
Q ss_pred EEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChh--hHHHHHHHHHHhc---CceEEEcc-CChhHHHHHHhcCC
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQ--FESWMRDTEATYK---DKYRGWVG-FNVPISHRITAGCD 458 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~--~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~ll~~~D 458 (576)
++|+||+.+.||++.+++|++++. ++++++++|+++.. ..+..+.....+. .++.++.+ .+.+.+..+++.||
T Consensus 204 i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 204 ILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred EEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCC
Confidence 999999999999999999999984 47889998877421 2222222222222 23555554 35666788999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCH------HHHHHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSE------ESMLTALRFAIRT 532 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~------~~la~~i~~~l~~ 532 (576)
++|+||.+|++|++++|||++|+|||+++.|+..|++.+ +.+|++++++|+ ++++++|.+++.
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~----------~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~- 351 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVD----------GETGFLVPPDNSDADGFQAELAKAINILLA- 351 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhC----------CCceEEcCCCCCcccchHHHHHHHHHHHHh-
Confidence 999999999999999999999999999999999999988 889999998887 777777777664
Q ss_pred hhhCHHHHHHHHHHHH---hhhCCHHHHHHHHHHHHHHhh
Q 008154 533 YREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~---~~~fs~~~~~~~y~~~y~~~~ 569 (576)
|++.+.++++++. .++|||+.++++|.++|++++
T Consensus 352 ---~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 352 ---DPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred ---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 8888888888873 568999999999999999764
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=330.69 Aligned_cols=378 Identities=16% Similarity=0.184 Sum_probs=254.0
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEE
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 142 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (576)
.++|||++++...++ ...||.+.++.+++++|.++||+|+++++..... .
T Consensus 56 ~~~mrI~~~~~~~~~-~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~----~------------------------- 105 (465)
T PLN02871 56 SRPRRIALFVEPSPF-SYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVP----Q------------------------- 105 (465)
T ss_pred CCCceEEEEECCcCC-cccccHHHHHHHHHHHHHHCCCeEEEEecCCCCC----c-------------------------
Confidence 678999999854333 4689999999999999999999999999753210 0
Q ss_pred EEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 143 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
...++.++.+...+.. .+... ...+. +...+.+.++.. +|||||+|.........+.
T Consensus 106 ---~~~g~~v~~~~~~~~~----~~~~~-------~~~~~-~~~~l~~~i~~~--------kpDiIh~~~~~~~~~~~~~ 162 (465)
T PLN02871 106 ---EFHGAKVIGSWSFPCP----FYQKV-------PLSLA-LSPRIISEVARF--------KPDLIHASSPGIMVFGALF 162 (465)
T ss_pred ---cccCceeeccCCcCCc----cCCCc-------eeecc-CCHHHHHHHHhC--------CCCEEEECCCchhHHHHHH
Confidence 0012222222110000 01000 00000 001122222222 7999999975433222222
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
..+. .++|+|+|.|+.... . ...... ..+.. ..+.+++...+.+|.+++
T Consensus 163 ~ak~------~~ip~V~~~h~~~~~-----~-~~~~~~--~~~~~-----------------~~~~~~r~~~~~ad~ii~ 211 (465)
T PLN02871 163 YAKL------LCVPLVMSYHTHVPV-----Y-IPRYTF--SWLVK-----------------PMWDIIRFLHRAADLTLV 211 (465)
T ss_pred HHHH------hCCCEEEEEecCchh-----h-hhcccc--hhhHH-----------------HHHHHHHHHHhhCCEEEE
Confidence 2222 478999999975211 0 000000 00000 001244666789999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+...+.+.. ....+..++.+||||+|.+.|.+.... ...++.+... .++.
T Consensus 212 ~S~~~~~~l~~---------~~~~~~~kv~vi~nGvd~~~f~p~~~~------------------~~~~~~~~~~-~~~~ 263 (465)
T PLN02871 212 TSPALGKELEA---------AGVTAANRIRVWNKGVDSESFHPRFRS------------------EEMRARLSGG-EPEK 263 (465)
T ss_pred CCHHHHHHHHH---------cCCCCcCeEEEeCCccCccccCCcccc------------------HHHHHHhcCC-CCCC
Confidence 99988877632 112235689999999999888764321 2233333211 1367
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCEEE
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILL 461 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v 461 (576)
++|+|+||+.+.||++.++++++++ ++++|+|+|+|+ ..++ ++...+.. ++ .+.|+ +.+.+..+|+.+|++|
T Consensus 264 ~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~-~~~~-l~~~~~~~--~V-~f~G~v~~~ev~~~~~~aDv~V 336 (465)
T PLN02871 264 PLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP-YREE-LEKMFAGT--PT-VFTGMLQGDELSQAYASGDVFV 336 (465)
T ss_pred eEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh-HHHH-HHHHhccC--Ce-EEeccCCHHHHHHHHHHCCEEE
Confidence 8999999999999999999999887 589999999985 2233 33332222 33 34454 4456778999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHH
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 541 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~ 541 (576)
+||.+|++|++++||||||+|||+++.||..|++.+ .+.+.+|++++++|+++++++|.+++. |++.+.
T Consensus 337 ~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~-------~~~~~~G~lv~~~d~~~la~~i~~ll~----~~~~~~ 405 (465)
T PLN02871 337 MPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPP-------DQEGKTGFLYTPGDVDDCVEKLETLLA----DPELRE 405 (465)
T ss_pred ECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhc-------CCCCCceEEeCCCCHHHHHHHHHHHHh----CHHHHH
Confidence 999999999999999999999999999999999864 122689999999999999999999885 788888
Q ss_pred HHHHHH--HhhhCCHHHHHHHHHH-HHHHhhh
Q 008154 542 GLMRRG--MEKDYTWENAAIQYEQ-VFEWASI 570 (576)
Q Consensus 542 ~~~~~a--~~~~fs~~~~~~~y~~-~y~~~~~ 570 (576)
++++++ ..++|+|+.+++++.+ .|+.++.
T Consensus 406 ~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~ 437 (465)
T PLN02871 406 RMGAAAREEVEKWDWRAATRKLRNEQYSAAIW 437 (465)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 888887 3468999999999998 7988764
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=323.01 Aligned_cols=365 Identities=20% Similarity=0.209 Sum_probs=249.0
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+.|. .||.++++..++++|+++||+|+|+++.++..... +..
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~----------------------------~~~ 50 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI----------------------------RYL 50 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc----------------------------ccc
Confidence 699999998984 79999999999999999999999999764321000 011
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHH-HHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVP-VLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~-~~l~~~ 225 (576)
..+++++.++.....+...+. .+......+.+.+... +|||||+|.+...+.. ..+..+
T Consensus 51 ~~~i~v~~~p~~~~~~~~~~~------------~~~~~~~~l~~~~~~~--------~~DiIh~~~~~~~~~~~~~~~~~ 110 (398)
T cd03796 51 TNGLKVYYLPFVVFYNQSTLP------------TFFGTFPLLRNILIRE--------RITIVHGHQAFSALAHEALLHAR 110 (398)
T ss_pred cCceeEEEecceeccCCcccc------------chhhhHHHHHHHHHhc--------CCCEEEECCCCchHHHHHHHHhh
Confidence 246677776532221110010 0000111122222212 7999999987655432 222222
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
. .++|+|+|.|+.... .. ...... ..+.+..++.+|.++++|+
T Consensus 111 ~------~~~~~v~t~h~~~~~---~~-------~~~~~~---------------------~~~~~~~~~~~d~ii~~s~ 153 (398)
T cd03796 111 T------MGLKTVFTDHSLFGF---AD-------ASSIHT---------------------NKLLRFSLADVDHVICVSH 153 (398)
T ss_pred h------cCCcEEEEecccccc---cc-------hhhHHh---------------------hHHHHHhhccCCEEEEecH
Confidence 2 578999999975210 00 000000 0134556788999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+.+.. ....+..++.+||||+|.+.|.+.... .+ ++.+++
T Consensus 154 ~~~~~~~~---------~~~~~~~k~~vi~ngvd~~~f~~~~~~--------------------------~~--~~~~~i 196 (398)
T cd03796 154 TSKENTVL---------RASLDPERVSVIPNAVDSSDFTPDPSK--------------------------RD--NDKITI 196 (398)
T ss_pred hHhhHHHH---------HhCCChhhEEEEcCccCHHHcCCCccc--------------------------CC--CCceEE
Confidence 87654311 112345789999999998777654311 11 467899
Q ss_pred EEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
+|+||+.+.||++.+++|+..+.+ ++++++|+|+|+ ..+...+.+++. +..++.+....+.+.+..+++.+|++++
T Consensus 197 ~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~-~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~ 275 (398)
T cd03796 197 VVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP-KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLN 275 (398)
T ss_pred EEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc-hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEe
Confidence 999999999999999999998865 689999999985 334444444433 2334544333355667789999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
||..|++|++++||||||+|||+++.||..|++.+ + .+++. +.|+++++++|.+++.+ ......
T Consensus 276 pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~----------~-~~~~~-~~~~~~l~~~l~~~l~~----~~~~~~ 339 (398)
T cd03796 276 TSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPP----------D-MILLA-EPDVESIVRKLEEAISI----LRTGKH 339 (398)
T ss_pred CChhhccCHHHHHHHHcCCCEEECCCCCchhheeC----------C-ceeec-CCCHHHHHHHHHHHHhC----hhhhhh
Confidence 99999999999999999999999999999999976 3 34444 44899999999999873 222222
Q ss_pred HHH---HHHhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 543 LMR---RGMEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 543 ~~~---~a~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
+++ +.+.++|||++++++|.++|++++..+
T Consensus 340 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~~ 372 (398)
T cd03796 340 DPWSFHNRVKKMYSWEDVAKRTEKVYDRILQTP 372 (398)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcCC
Confidence 333 336789999999999999999987643
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=326.85 Aligned_cols=431 Identities=16% Similarity=0.150 Sum_probs=268.2
Q ss_pred ceEEEEeeccC-------CccccCcHHHHHhhHH--------HHHHhCCCcEE----EEEecCCCCCCcccchhccccCc
Q 008154 66 YNIVFVTAEAA-------PYSKTGGLGDVCGSLP--------VALAARGHRVM----VVSPRYFNGTAADENFTLAKDLG 126 (576)
Q Consensus 66 mkI~~~s~e~~-------P~~~~GG~~~~~~~la--------~~l~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 126 (576)
|+|+++|...+ ....+||.-+|+.++| ++|+++||+|+ |+|-..+..... .+.+..
T Consensus 280 ~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~~--~~~~~~--- 354 (815)
T PLN00142 280 FNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGT--TCNQRL--- 354 (815)
T ss_pred HhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccCC--cccCcc---
Confidence 58999998732 1124899999998755 67778999885 888544322100 000000
Q ss_pred eeEEEeecCCeeEEEEEEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHHhhc-ccCCCCCCCC
Q 008154 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEAP-LVLPLGGFTY 202 (576)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~-~~~~~~~~~~ 202 (576)
+ .....+++++.+++..+-. . |-. .|..++.-+ ..++..+.+.+ +..+
T Consensus 355 ---e------------~v~~~~~~~I~rvP~g~~~---~-~l~---~~i~ke~l~p~L~~f~~~~~~~~~~~~~------ 406 (815)
T PLN00142 355 ---E------------KVSGTEHSHILRVPFRTEK---G-ILR---KWISRFDVWPYLETFAEDAASEILAELQ------ 406 (815)
T ss_pred ---e------------eccCCCceEEEecCCCCCc---c-ccc---cccCHHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 0 0001136777777633210 0 000 011222222 22333333222 1121
Q ss_pred CCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCC
Q 008154 203 GEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALD 282 (576)
Q Consensus 203 ~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (576)
.+||+||+|.|.+++++..++.+ .++|.|+|.|+...... ...+...... .. .+.
T Consensus 407 ~~PDlIHaHYwdsg~vA~~La~~-------lgVP~v~T~HsL~k~K~------~~~~~~~~~~---e~---------~y~ 461 (815)
T PLN00142 407 GKPDLIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKY------PDSDIYWKKF---DD---------KYH 461 (815)
T ss_pred CCCCEEEECCccHHHHHHHHHHH-------hCCCEEEEcccchhhhc------cccCCccccc---ch---------hhh
Confidence 26999999999999999998876 47999999998732111 0001100000 00 000
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccc--cC----C---cchhhhh---hccCCceeEecCCCCCCCCCCCCCcc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTV--EG----G---YGLHEIL---SSRKSVLNGITNGIDITEWNPSSDEH 350 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~--~~----~---~~l~~~~---~~~~~~i~vi~nGvd~~~~~~~~~~~ 350 (576)
+..++..+..+++.||.|++.|......+... .+ + .+|+..+ .....++.+||+|+|...|.|.....
T Consensus 462 ~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~ 541 (815)
T PLN00142 462 FSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQ 541 (815)
T ss_pred hhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHH
Confidence 12234567889999999999886544321100 00 0 0111111 12245889999999998887654221
Q ss_pred ccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCC-Chh---h
Q 008154 351 IASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSG-DPQ---F 424 (576)
Q Consensus 351 l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g-~~~---~ 424 (576)
-.....-.......-+....++.+|+..+++.++|+++||+.+.||++.|++|+.++.+ ++++|+|+|++ ++. .
T Consensus 542 ~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d 621 (815)
T PLN00142 542 KRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKD 621 (815)
T ss_pred hhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCcccccccc
Confidence 00000000000111112233456676444677899999999999999999999998754 47999999987 211 1
Q ss_pred HH------HHHHHHHH--hcCceEEEccC-----ChhHHHHHHh-cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc
Q 008154 425 ES------WMRDTEAT--YKDKYRGWVGF-----NVPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 425 ~~------~~~~~~~~--~~~~~~~~~~~-----~~~~~~~ll~-~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
.+ .+..+.+. +.+++. +.+. +.+....+++ ++|++|+||.+|+||++++||||||+|||+|+.||
T Consensus 622 ~ee~~el~~L~~La~~lgL~~~V~-flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG 700 (815)
T PLN00142 622 REEIAEIKKMHSLIEKYNLKGQFR-WIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGG 700 (815)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcEE-EcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC
Confidence 11 11122222 234554 3332 1123334555 57999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---hhhCCHHHHHHHHHHHH
Q 008154 491 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVF 565 (576)
Q Consensus 491 ~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~---~~~fs~~~~~~~y~~~y 565 (576)
..|++.+ |.+|++++++|+++++++|.+++..+..|++.|.++++++. .++|||+.++++++++-
T Consensus 701 ~~EIV~d----------G~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 701 PAEIIVD----------GVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHhcC----------CCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999998 99999999999999999999988766679999999999883 46899999999998764
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-36 Score=310.08 Aligned_cols=366 Identities=21% Similarity=0.250 Sum_probs=255.4
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++ +| ..||.++++.+++++|++.||+|++++...+... . .
T Consensus 1 mki~~~~---~p--~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~------~------------------------~ 45 (371)
T cd04962 1 MKIGIVC---YP--TYGGSGVVATELGKALARRGHEVHFITSSRPFRL------D------------------------E 45 (371)
T ss_pred CceeEEE---Ee--CCCCccchHHHHHHHHHhcCCceEEEecCCCcch------h------------------------h
Confidence 7899997 35 2699999999999999999999999986432110 0 0
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
...++.++.++.+.+.. .. ..... ......+.+.++.. +|||||+|.+.......++..+
T Consensus 46 ~~~~~~~~~~~~~~~~~----~~-------~~~~~-~~~~~~l~~~i~~~--------~~divh~~~~~~~~~~~~~~~~ 105 (371)
T cd04962 46 YSPNIFFHEVEVPQYPL----FQ-------YPPYD-LALASKIAEVAKRY--------KLDLLHVHYAVPHAVAAYLARE 105 (371)
T ss_pred hccCeEEEEecccccch----hh-------cchhH-HHHHHHHHHHHhcC--------CccEEeecccCCccHHHHHHHH
Confidence 01222322222111100 00 00000 11122333333222 7999999976554444444432
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
... ..++|+|+|+|+..... .+.. .....+.+.+++.+|.++++|+
T Consensus 106 ~~~---~~~~~~i~~~h~~~~~~---------~~~~----------------------~~~~~~~~~~~~~~d~ii~~s~ 151 (371)
T cd04962 106 ILG---KKDLPVVTTLHGTDITL---------VGQD----------------------PSFQPATRFSIEKSDGVTAVSE 151 (371)
T ss_pred hcC---cCCCcEEEEEcCCcccc---------cccc----------------------ccchHHHHHHHhhCCEEEEcCH
Confidence 210 03689999999652110 0000 0011356677899999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+.+.+ .+ ....++.+||||+|...+.+.. ....++..+++ ++..++
T Consensus 152 ~~~~~~~~---------~~-~~~~~i~vi~n~~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~i 200 (371)
T cd04962 152 SLRQETYE---------LF-DITKEIEVIPNFVDEDRFRPKP-------------------DEALKRRLGAP--EGEKVL 200 (371)
T ss_pred HHHHHHHH---------hc-CCcCCEEEecCCcCHhhcCCCc-------------------hHHHHHhcCCC--CCCeEE
Confidence 88776532 12 2356799999999977665443 22344566665 567889
Q ss_pred EEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+++||+.+.||++.+++|+.++.+ .+++++++|.|+. .+...+.+.+. ...++. +.++..+ +..+++.||++|+|
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~~v~-~~g~~~~-~~~~~~~~d~~v~p 277 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGPE-RSPAERLARELGLQDDVL-FLGKQDH-VEELLSIADLFLLP 277 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCcC-HHHHHHHHHHcCCCceEE-EecCccc-HHHHHHhcCEEEeC
Confidence 999999999999999999999876 4799999999953 34444433332 233444 4555444 56899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++|||++|+|||+|+.|+..|++.+ +.+|++++++|++++++++.+++. +++.+.++
T Consensus 278 s~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~----------~~~G~~~~~~~~~~l~~~i~~l~~----~~~~~~~~ 343 (371)
T cd04962 278 SEKESFGLAALEAMACGVPVVASNAGGIPEVVKH----------GETGFLVDVGDVEAMAEYALSLLE----DDELWQEF 343 (371)
T ss_pred CCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcC----------CCceEEcCCCCHHHHHHHHHHHHh----CHHHHHHH
Confidence 9999999999999999999999999999999998 899999999999999999998875 78888888
Q ss_pred HHHH---HhhhCCHHHHHHHHHHHHHHh
Q 008154 544 MRRG---MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 544 ~~~a---~~~~fs~~~~~~~y~~~y~~~ 568 (576)
++++ +.++|||+.++++|.++|+++
T Consensus 344 ~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 344 SRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 8877 357899999999999999864
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=302.85 Aligned_cols=360 Identities=13% Similarity=0.200 Sum_probs=248.0
Q ss_pred eEEEEeeccCCc--cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEE
Q 008154 67 NIVFVTAEAAPY--SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 144 (576)
Q Consensus 67 kI~~~s~e~~P~--~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (576)
||++++.+-+|. ...||+++++..+++.|+. +|+++|...+. .... +
T Consensus 4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~-~~~~---------------------------~ 52 (380)
T PRK15484 4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPG-YPEY---------------------------T 52 (380)
T ss_pred eEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCC-CCch---------------------------h
Confidence 699998884332 5689999999999999953 99999977553 1110 1
Q ss_pred eeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 145 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 145 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
...+|+.++.++-+. +|+...+-|... +...+...+...+... ...++||||+|+... +. ..+..
T Consensus 53 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~vi~v~~~~~-~~-~~~~~ 117 (380)
T PRK15484 53 KVNDNCDIHYIGFSR------IYKRLFQKWTRL--DPLPYSQRILNIAHKF-----TITKDSVIVIHNSMK-LY-RQIRE 117 (380)
T ss_pred hccCCCceEEEEecc------ccchhhhhhhcc--CchhHHHHHHHHHHhc-----CCCCCcEEEEeCcHH-hH-HHHHh
Confidence 122566666664221 111100000000 0011122222222111 112689999998432 22 22233
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
+. +++++|++.|+.. . ...+..++.++++|
T Consensus 118 ~~------~~~~~v~~~h~~~-----~---------------------------------------~~~~~~~~~ii~~S 147 (380)
T PRK15484 118 RA------PQAKLVMHMHNAF-----E---------------------------------------PELLDKNAKIIVPS 147 (380)
T ss_pred hC------CCCCEEEEEeccc-----C---------------------------------------hhHhccCCEEEEcC
Confidence 22 6789999999641 0 11124578999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+..++.+.. ..+..++.+||||+|.+.|.+.. ....++.++++ ++..+
T Consensus 148 ~~~~~~~~~-----------~~~~~~i~vIpngvd~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 195 (380)
T PRK15484 148 QFLKKFYEE-----------RLPNADISIVPNGFCLETYQSNP-------------------QPNLRQQLNIS--PDETV 195 (380)
T ss_pred HHHHHHHHh-----------hCCCCCEEEecCCCCHHHcCCcc-------------------hHHHHHHhCCC--CCCeE
Confidence 988876531 12355789999999987776543 23456677776 46688
Q ss_pred EEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChh-------hHHHHHHHHHHhcCceEEEccCChhHHHHHHh
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ-------FESWMRDTEATYKDKYRGWVGFNVPISHRITA 455 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 455 (576)
|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+++.. +.+..+.+...+..++.+....+.+.+..+|+
T Consensus 196 il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~ 275 (380)
T PRK15484 196 LLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYP 275 (380)
T ss_pred EEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHH
Confidence 9999999999999999999999865 68999999987421 12223333334455555443345567778999
Q ss_pred cCCEEEeCCCC-CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCccee-EeCCCCHHHHHHHHHHHHHHh
Q 008154 456 GCDILLMPSRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW-SFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 456 ~~Dv~v~ps~~-E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~-~~~~~d~~~la~~i~~~l~~~ 533 (576)
.||++|+||.+ |+||++++||||||+|||+|+.||++|++.+ +.+|+ ++++.|+++++++|.+++.
T Consensus 276 ~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~----------~~~G~~l~~~~d~~~la~~I~~ll~-- 343 (380)
T PRK15484 276 LADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLE----------GITGYHLAEPMTSDSIISDINRTLA-- 343 (380)
T ss_pred hCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhccc----------CCceEEEeCCCCHHHHHHHHHHHHc--
Confidence 99999999985 9999999999999999999999999999998 89999 5578899999999999886
Q ss_pred hhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhh
Q 008154 534 REHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 534 ~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
|++. .++++++ +.++|||++++++|.++|+...
T Consensus 344 --d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 344 --DPEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred --CHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 6654 5677776 4579999999999999998643
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=308.24 Aligned_cols=275 Identities=16% Similarity=0.204 Sum_probs=208.8
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCc
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
+||+||+|.++++.....++.... .+.+.++|.|+..... .. ....+
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~---~~------~~~~~------------------- 164 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISS---RE------VLNHY------------------- 164 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCC-----CCCCeEEEEccccccc---ch------hhhhh-------------------
Confidence 799999999877666555554211 3456788999752110 00 00000
Q ss_pred CccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccc
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 363 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~ 363 (576)
....+..++.||.++++|+...+.+.. .+.+..++.+||||+|.+.|.+....
T Consensus 165 ---~~~~~~~~~~ad~vv~~S~~~~~~l~~----------~g~~~~ki~vi~nGvd~~~f~~~~~~-------------- 217 (406)
T PRK15427 165 ---TPEYQQLFRRGDLMLPISDLWAGRLQK----------MGCPPEKIAVSRMGVDMTRFSPRPVK-------------- 217 (406)
T ss_pred ---hHHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCHHHEEEcCCCCCHHHcCCCccc--------------
Confidence 013445678999999999988876531 23456789999999998877643211
Q ss_pred hHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceE
Q 008154 364 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYR 440 (576)
Q Consensus 364 ~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~ 440 (576)
...+.+.|+++||+.+.||++.+++|++.|.+ ++++++|+|+|+ ..++..+.+++. ...++.
T Consensus 218 --------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~-~~~~l~~~~~~~~l~~~V~ 282 (406)
T PRK15427 218 --------------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP-WERRLRTLIEQYQLEDVVE 282 (406)
T ss_pred --------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch-hHHHHHHHHHHcCCCCeEE
Confidence 01245789999999999999999999999975 579999999995 334444444442 233444
Q ss_pred EEccC-ChhHHHHHHhcCCEEEeCCCC------CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeE
Q 008154 441 GWVGF-NVPISHRITAGCDILLMPSRF------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS 513 (576)
Q Consensus 441 ~~~~~-~~~~~~~ll~~~Dv~v~ps~~------E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~ 513 (576)
+.|+ +.+....+|+.||++|+||.. |++|++++||||||+|||+|+.||.+|++.+ +.+|++
T Consensus 283 -~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~----------~~~G~l 351 (406)
T PRK15427 283 -MPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEA----------DKSGWL 351 (406)
T ss_pred -EeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcC----------CCceEE
Confidence 5555 556677899999999999974 9999999999999999999999999999998 899999
Q ss_pred eCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHH
Q 008154 514 FLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 514 ~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~ 567 (576)
++++|+++++++|.+++. .|++.+.+|++++ +.++|+|+.+++++.++|++
T Consensus 352 v~~~d~~~la~ai~~l~~---~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 352 VPENDAQALAQRLAAFSQ---LDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred eCCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999999998874 2788888888887 46799999999999999975
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-35 Score=304.86 Aligned_cols=374 Identities=17% Similarity=0.149 Sum_probs=243.5
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||+|+..++++. ..++|++|+++||+|+++|+.-....
T Consensus 1 ~il~~~~~~p~~---------~~~la~~L~~~G~~v~~~~~~~~~~~--------------------------------- 38 (396)
T cd03818 1 RILFVHQNFPGQ---------FRHLAPALAAQGHEVVFLTEPNAAPP--------------------------------- 38 (396)
T ss_pred CEEEECCCCchh---------HHHHHHHHHHCCCEEEEEecCCCCCC---------------------------------
Confidence 589998775331 46799999999999999997632210
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
.+|++++++.......+ ..++ |..........+..+.+.+..+....| +|||||+|.+.+. ..+++...
T Consensus 39 ~~~v~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~pdvi~~h~~~~~--~~~l~~~~ 107 (396)
T cd03818 39 PGGVRVVRYRPPRGPTS-GTHP-----YLREFEEAVLRGQAVARALLALRAKGF---RPDVIVAHPGWGE--TLFLKDVW 107 (396)
T ss_pred CCCeeEEEecCCCCCCC-CCCc-----cchhHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEECCccch--hhhHHHhC
Confidence 01577777764332211 1221 112222222222233333322222233 8999999975432 22333333
Q ss_pred cCCCCCCCCcEEEEeecCCC-CC---CCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 227 RPHGVYKDARSILVIHNLSH-QG---VEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
+++|+|.++|.... ++ .+.+.. +...... ..+ .........+++.||.+++
T Consensus 108 ------~~~~~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~--~~~-----------~~~~~~~~~~~~~ad~vi~ 162 (396)
T cd03818 108 ------PDAPLIGYFEFYYRAEGADVGFDPEF------PPSLDDA--LRL-----------RNRNALILLALAQADAGVS 162 (396)
T ss_pred ------CCCCEEEEEeeeecCCCCCCCCCCCC------CCchhHH--HHH-----------HHhhhHhHHHHHhCCEEEC
Confidence 56888887764310 01 011100 0000000 000 0000124567899999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+..++.+.. ....++.+||||+|.+.|.+.... .........++ ++.
T Consensus 163 ~s~~~~~~~~~------------~~~~ki~vI~ngvd~~~f~~~~~~-----------------~~~~~~~~~~~--~~~ 211 (396)
T cd03818 163 PTRWQRSTFPA------------ELRSRISVIHDGIDTDRLRPDPQA-----------------RLRLPNGRVLT--PGD 211 (396)
T ss_pred CCHHHHhhCcH------------hhccceEEeCCCccccccCCCchh-----------------hhcccccccCC--CCC
Confidence 99988766531 123689999999999888765422 11111112223 466
Q ss_pred CEEEEecc-cccccCHHHHHHHHHhhhc--CCcEEEEEeCCChh-----------hHHHHHHHHHH-hcCceEEEccCCh
Q 008154 383 PLIGFIGR-LDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ-----------FESWMRDTEAT-YKDKYRGWVGFNV 447 (576)
Q Consensus 383 ~~i~~~Gr-~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~-----------~~~~~~~~~~~-~~~~~~~~~~~~~ 447 (576)
++|+|+|| +.+.||++.+++|+..+.+ ++++++|+|++.+. .+...+.+... ...++.+....+.
T Consensus 212 ~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~ 291 (396)
T cd03818 212 EVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPY 291 (396)
T ss_pred eEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCH
Confidence 88999998 9999999999999999875 68999999974311 11222222221 1234444333355
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 527 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~ 527 (576)
+....+|+.+|++++||..|++|++++||||||+|||+|+.|+..|++.+ +.+|++++++|+++++++|.
T Consensus 292 ~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~----------~~~G~lv~~~d~~~la~~i~ 361 (396)
T cd03818 292 DQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITD----------GENGLLVDFFDPDALAAAVI 361 (396)
T ss_pred HHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhccc----------CCceEEcCCCCHHHHHHHHH
Confidence 66778999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHH
Q 008154 528 FAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 528 ~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~ 563 (576)
+++. |++.+.+|++++ +.++|||++++++|.+
T Consensus 362 ~ll~----~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 362 ELLD----DPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HHHh----CHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 9886 788888888877 3457999999999863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=299.25 Aligned_cols=363 Identities=18% Similarity=0.133 Sum_probs=245.1
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
.+|+++.... ..||.++++.++++.|.+.|+++++++... .+ .+... .
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~-~~-----~~~~~----------------------~ 49 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTE-VS-----AFRKR----------------------I 49 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCC-CC-----hhHHH----------------------H
Confidence 4699998652 369999999999999999999999887421 11 11110 0
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
...|+.++.++.+.. ..... ...+.+.++.. +|||||+|...+.. ..+....
T Consensus 50 ~~~~i~~~~~~~~~~---------------~~~~~----~~~l~~~l~~~--------~~Divh~~~~~~~~-~~~~~~~ 101 (374)
T TIGR03088 50 QRPDVAFYALHKQPG---------------KDVAV----YPQLYRLLRQL--------RPDIVHTRNLAALE-AQLPAAL 101 (374)
T ss_pred HhcCceEEEeCCCCC---------------CChHH----HHHHHHHHHHh--------CCCEEEEcchhHHH-HHHHHHh
Confidence 113566666642210 00111 11222232222 79999999754332 2222222
Q ss_pred ccCCCCCCCCcE-EEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 226 YRPHGVYKDARS-ILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 226 ~~~~~~~~~~~~-v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
.++|. +.+.|.... +... + ..+. ...+.+...+.+|.++++|
T Consensus 102 -------~~~~~~i~~~h~~~~---~~~~-----~--~~~~--------------------~~~~~~~~~~~~~~~i~vs 144 (374)
T TIGR03088 102 -------AGVPARIHGEHGRDV---FDLD-----G--SNWK--------------------YRWLRRLYRPLIHHYVAVS 144 (374)
T ss_pred -------cCCCeEEEeecCccc---ccch-----h--hHHH--------------------HHHHHHHHHhcCCeEEEeC
Confidence 23443 445453211 0000 0 0000 0012334456789999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+...+.+. ..+..+..++.+|+||+|.+.|.+.... ....++....+ ++.++
T Consensus 145 ~~~~~~~~---------~~~~~~~~~~~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~ 196 (374)
T TIGR03088 145 RDLEDWLR---------GPVKVPPAKIHQIYNGVDTERFHPSRGD-----------------RSPILPPDFFA--DESVV 196 (374)
T ss_pred HHHHHHHH---------HhcCCChhhEEEeccCccccccCCCccc-----------------hhhhhHhhcCC--CCCeE
Confidence 98877653 2234456789999999998877654321 11122222223 46789
Q ss_pred EEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
|+++||+.+.||++.+++|+..+.+ ++++|+++|+|+. .++..+.+.+......+.+.+... ....+++.+|
T Consensus 197 i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~ad 274 (374)
T TIGR03088 197 VGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA-RGACEQMVRAAGLAHLVWLPGERD-DVPALMQALD 274 (374)
T ss_pred EEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCch-HHHHHHHHHHcCCcceEEEcCCcC-CHHHHHHhcC
Confidence 9999999999999999999998864 2689999999852 344444444332233444555543 3568999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 538 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~ 538 (576)
++|+||.+|++|++++|||+||+|||+|+.||..|++.+ +.+|++++++|+++++++|.+++. +++
T Consensus 275 i~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~----------~~~g~~~~~~d~~~la~~i~~l~~----~~~ 340 (374)
T TIGR03088 275 LFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQH----------GVTGALVPPGDAVALARALQPYVS----DPA 340 (374)
T ss_pred EEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcC----------CCceEEeCCCCHHHHHHHHHHHHh----CHH
Confidence 999999999999999999999999999999999999988 889999999999999999998875 777
Q ss_pred HHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhh
Q 008154 539 SWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 539 ~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
.+.++++++ +.++|||+.++++|.++|++++
T Consensus 341 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 341 ARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence 777777776 4579999999999999998763
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=280.94 Aligned_cols=365 Identities=20% Similarity=0.243 Sum_probs=261.9
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
++|+++|..++|. .||++.+++.+++.|.++||.|.+++..|++-.. -+.
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~g----------------------------iry 50 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG----------------------------IRY 50 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccc----------------------------eee
Confidence 4699999999994 7999999999999999999999999988866311 122
Q ss_pred eecCeEEEEecCCCCCC-C--CCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHH-H
Q 008154 146 YREGVDWVFVDHPSYHR-P--GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV-L 221 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~-~--~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~-~ 221 (576)
.-+|++||.++-....+ + .++|+. + ...|-.++ +++..|||.|...+.+.-- +
T Consensus 51 lt~glkVyylp~~v~~n~tT~ptv~~~----~--Pllr~i~l-----------------rE~I~ivhghs~fS~lahe~l 107 (426)
T KOG1111|consen 51 LTNGLKVYYLPAVVGYNQTTFPTVFSD----F--PLLRPILL-----------------RERIEIVHGHSPFSYLAHEAL 107 (426)
T ss_pred ecCCceEEEEeeeeeecccchhhhhcc----C--cccchhhh-----------------hhceEEEecCChHHHHHHHHH
Confidence 33679999998433221 1 112321 0 01111111 1257999999866655422 2
Q ss_pred HHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhcccee
Q 008154 222 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 301 (576)
Q Consensus 222 l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~ 301 (576)
+..+. .|.++|||.|........ ...+.. +....++...|.++
T Consensus 108 ~hart------MGlktVfTdHSlfGfad~----------~si~~n---------------------~ll~~sL~~id~~I 150 (426)
T KOG1111|consen 108 MHART------MGLKTVFTDHSLFGFADI----------GSILTN---------------------KLLPLSLANIDRII 150 (426)
T ss_pred HHHHh------cCceEEEeccccccccch----------hhhhhc---------------------ceeeeeecCCCcEE
Confidence 22222 678999999985221111 111111 12334567889999
Q ss_pred ccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCC
Q 008154 302 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 381 (576)
Q Consensus 302 ~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (576)
+||..-++... ++. ...+.++.+|||.++...|.|.... .+ ..+
T Consensus 151 cVshtskentv-------lr~--~L~p~kvsvIPnAv~~~~f~P~~~~--------------------------~~-S~~ 194 (426)
T KOG1111|consen 151 CVSHTSKENTV-------LRG--ALAPAKVSVIPNAVVTHTFTPDAAD--------------------------KP-SAD 194 (426)
T ss_pred EEeecCCCceE-------EEe--ccCHhHeeeccceeeccccccCccc--------------------------cC-CCC
Confidence 99997776543 333 2357789999999999999985532 01 123
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEEccCChhHHHHHHhcCC
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
..+|+.++|+..+||+|++++++.++.+ ++++|+|+|+|+. .....+.+++ .++.++..+...+.+.+++.|...|
T Consensus 195 i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk-~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~ 273 (426)
T KOG1111|consen 195 IITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPK-RIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGD 273 (426)
T ss_pred eeEEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcc-cchHHHHHHHhhccCceEEecccchHHHHHHHhcCc
Confidence 3789999999999999999999999987 7999999999963 2333333332 3455666566567788899999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 538 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~ 538 (576)
+|++||..|+||++++|||+||+|||+|+.||++|++.+ .. .......++++++++++++..+...|+
T Consensus 274 IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~-----------d~-i~~~~~~~~dl~~~v~~ai~~~~~~p~ 341 (426)
T KOG1111|consen 274 IFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPE-----------DM-ITLGEPGPDDLVGAVEKAITKLRTLPL 341 (426)
T ss_pred EEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCc-----------cc-eeccCCChHHHHHHHHHHHHHhccCch
Confidence 999999999999999999999999999999999999976 22 223445799999999999987766654
Q ss_pred HHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 539 SWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 539 ~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
... +.+++.|+|+..+++..++|.++...+.
T Consensus 342 ~~h----~~v~~~y~w~dVa~rTekvy~r~~~t~~ 372 (426)
T KOG1111|consen 342 EFH----DRVKKMYSWKDVAERTEKVYDRAATTSI 372 (426)
T ss_pred hHH----HHHHHhccHHHHHHHHHHHHHHHhhccC
Confidence 333 3356789999999999999999876553
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=300.13 Aligned_cols=372 Identities=17% Similarity=0.165 Sum_probs=239.5
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||+++.+. ...||.++++.++|++|+++||+|+++++..+... .+. .
T Consensus 1 mkIl~~~~~----~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~----~~~------------------------~ 48 (392)
T cd03805 1 LRVAFIHPD----LGIGGAERLVVDAALALQSRGHEVTIYTSHHDPSH----CFE------------------------E 48 (392)
T ss_pred CeEEEECCC----CCCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchh----cch------------------------h
Confidence 799999654 34699999999999999999999999997532210 000 0
Q ss_pred eec-CeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 146 YRE-GVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 146 ~~~-gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
..+ ++.+..+... ..+ ..++ ....+..+...........-. ...++||||+|.+..+. +. +..
T Consensus 49 ~~~~~~~i~~~~~~--~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~---~~~~~Dvi~~~~~~~~~-~~-~~~ 112 (392)
T cd03805 49 TKDGTLPVRVRGDW--LPR-SIFG--------RFHILCAYLRMLYLALYLLLL---PDEKYDVFIVDQVSACV-PL-LKL 112 (392)
T ss_pred ccCCeeEEEEEeEE--Ecc-hhhH--------hHHHHHHHHHHHHHHHHHHhc---ccCCCCEEEEcCcchHH-HH-HHH
Confidence 011 1333322210 000 0010 000110000000000000000 11278999998755432 22 221
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhh-cCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKN-LGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
. .+.|+|+++|.+. ..... .+.....+... ...+++.+++.||.++++
T Consensus 113 -~------~~~~~i~~~h~~~-------~~~~~~~~~~~~~~~~~-----------------~~~~e~~~~~~ad~ii~~ 161 (392)
T cd03805 113 -F------SPSKILFYCHFPD-------QLLAQRGSLLKRLYRKP-----------------FDWLEEFTTGMADKIVVN 161 (392)
T ss_pred -h------cCCcEEEEEecCh-------HHhcCCCcHHHHHHHHH-----------------HHHHHHHHhhCceEEEEc
Confidence 1 2378999999542 11110 01101111000 013567788999999999
Q ss_pred CccchhhhccccCCcchhhhhhcc-CCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSR-KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~-~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
|+.+.+.+. ..+... ..++.+|+||+|.+.|.+.... . ..+....+ ++.
T Consensus 162 s~~~~~~~~---------~~~~~~~~~~~~vi~n~vd~~~~~~~~~~------------------~-~~~~~~~~--~~~ 211 (392)
T cd03805 162 SNFTASVFK---------KTFPSLAKNPREVVYPCVDTDSFESTSED------------------P-DPGLLIPK--SGK 211 (392)
T ss_pred ChhHHHHHH---------HHhcccccCCcceeCCCcCHHHcCccccc------------------c-cccccccC--CCc
Confidence 998887653 222222 2334699999998877654321 0 11112222 467
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhc-----CCcEEEEEeCCChh-------hHHHHHHHHH--HhcCceEEEccCChh
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILA-----DDIQFVMLGSGDPQ-------FESWMRDTEA--TYKDKYRGWVGFNVP 448 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-----~~~~lii~G~g~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~ 448 (576)
++++++||+.+.||++.+++|++++.+ ++++|+++|++++. .++..+.+.+ ....++.+....+.+
T Consensus 212 ~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~ 291 (392)
T cd03805 212 KTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDS 291 (392)
T ss_pred eEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChH
Confidence 899999999999999999999999865 37999999998532 1233333333 123455544444566
Q ss_pred HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHH
Q 008154 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 449 ~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
....+++.||++++||..|+||++++|||+||+|||+++.||..|.+.+ +.+|+++++ |+++++++|.+
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~----------~~~g~~~~~-~~~~~a~~i~~ 360 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVD----------GETGFLCEP-TPEEFAEAMLK 360 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhcc----------CCceEEeCC-CHHHHHHHHHH
Confidence 6678999999999999999999999999999999999999999999988 789999876 89999999988
Q ss_pred HHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHH
Q 008154 529 AIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQY 561 (576)
Q Consensus 529 ~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y 561 (576)
++. +++.+.++++++ +.++|||+.+++++
T Consensus 361 l~~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 361 LAN----DPDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHh----ChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 875 777888888877 45789999998763
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=293.66 Aligned_cols=365 Identities=24% Similarity=0.294 Sum_probs=250.4
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCCC
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY 160 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~ 160 (576)
.||.++++.+++++|+++||+|+|++.......... ....+++.+++++..+.
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~ 72 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI---------------------------VELAPGVRVVRVPAGPA 72 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCcccCCc---------------------------cccccceEEEecccccc
Confidence 689999999999999999999999986543321100 11224677776653221
Q ss_pred C--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEE
Q 008154 161 H--RPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSI 238 (576)
Q Consensus 161 ~--~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 238 (576)
. ....++ .....+...+...+.... .+||+||+|.+..+.....+++. .++|+|
T Consensus 73 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~------~~~Div~~~~~~~~~~~~~~~~~-------~~~~~i 128 (398)
T cd03800 73 EYLPKEELW-----------PYLDEFADDLLRFLRREG------GRPDLIHAHYWDSGLVALLLARR-------LGIPLV 128 (398)
T ss_pred cCCChhhcc-----------hhHHHHHHHHHHHHHhcC------CCccEEEEecCccchHHHHHHhh-------cCCceE
Confidence 1 000001 011112222222222111 17999999988777766665543 478999
Q ss_pred EEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCc
Q 008154 239 LVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGY 318 (576)
Q Consensus 239 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~ 318 (576)
+|.|+....... ..... ..+ ........++.+++.||.++++|+...+.+.
T Consensus 129 ~~~h~~~~~~~~------~~~~~-~~~----------------~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~------ 179 (398)
T cd03800 129 HTFHSLGAVKRR------HLGAA-DTY----------------EPARRIEAEERLLRAADRVIASTPQEAEELY------ 179 (398)
T ss_pred EEeecccccCCc------ccccc-ccc----------------chhhhhhHHHHHHhhCCEEEEcCHHHHHHHH------
Confidence 999975321100 00000 000 0011234567788999999999998776653
Q ss_pred chhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHH
Q 008154 319 GLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGID 398 (576)
Q Consensus 319 ~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~ 398 (576)
........++.+||||+|.+.|.+.... ...++..+.+ ++.++|+|+||+.+.||++
T Consensus 180 ---~~~~~~~~~~~vi~ng~~~~~~~~~~~~------------------~~~~~~~~~~--~~~~~i~~~gr~~~~k~~~ 236 (398)
T cd03800 180 ---SLYGAYPRRIRVVPPGVDLERFTPYGRA------------------EARRARLLRD--PDKPRILAVGRLDPRKGID 236 (398)
T ss_pred ---HHccccccccEEECCCCCccceecccch------------------hhHHHhhccC--CCCcEEEEEcccccccCHH
Confidence 2223345568999999998877654321 1113334444 4678999999999999999
Q ss_pred HHHHHHHhhhc--CCcEEEEEeCCChhhH----HHHHHHHHHh--cCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCc
Q 008154 399 LIRLAAPEILA--DDIQFVMLGSGDPQFE----SWMRDTEATY--KDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCG 470 (576)
Q Consensus 399 ~ll~a~~~L~~--~~~~lii~G~g~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g 470 (576)
.+++|+..+.+ ++++++++|++..... ...+.+.+.. ..++.+....+.+.+..+++.||++++||..|++|
T Consensus 237 ~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~ 316 (398)
T cd03800 237 TLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFG 316 (398)
T ss_pred HHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccC
Confidence 99999999975 5899999998853221 1122232322 23444333335566778999999999999999999
Q ss_pred HHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--
Q 008154 471 LNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM-- 548 (576)
Q Consensus 471 ~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~-- 548 (576)
++++|||++|+|||+++.++..|.+.+ +++|++++++|+++++++|.+++. +++.+.++++++.
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~----------~~~g~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~~~a~~~ 382 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVD----------GVTGLLVDPRDPEALAAALRRLLT----DPALRRRLSRAGLRR 382 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccC----------CCCeEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHH
Confidence 999999999999999999999999988 789999999999999999999875 7888888888773
Q ss_pred -hhhCCHHHHHHHHH
Q 008154 549 -EKDYTWENAAIQYE 562 (576)
Q Consensus 549 -~~~fs~~~~~~~y~ 562 (576)
.++|||+.++++|.
T Consensus 383 ~~~~~s~~~~~~~~~ 397 (398)
T cd03800 383 ARARYTWERVAARLL 397 (398)
T ss_pred HHHhCCHHHHHHHHh
Confidence 47999999999986
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=307.44 Aligned_cols=479 Identities=16% Similarity=0.134 Sum_probs=330.2
Q ss_pred EEEEeec-----cCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC-----------------
Q 008154 68 IVFVTAE-----AAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL----------------- 125 (576)
Q Consensus 68 I~~~s~e-----~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~----------------- 125 (576)
++++++| ..| .+.||+|++++++.++++++|.+.+++|..|.+|.+.|. ..+.++.
T Consensus 97 ~~~~~~e~~~~e~~p-~lgGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~-~~dG~Q~E~p~~w~~~~~pwe~~r 174 (750)
T COG0058 97 LGYFLMEFGEHESDP-GLGGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQS-DVDGWQVELPDEWLKYGNPWEFLR 174 (750)
T ss_pred hhccHHHHhhcccCc-cccccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeee-ccCCceEecchhhhccCCcceeec
Confidence 7888876 566 567999999999999999999999999999999977544 3222221
Q ss_pred -----ceeEEEeecC-CeeEEEEEEeeecCeEEEEecCCC-----CCC--CCCCCCCCCCCCCc-hHHHH---HHHHHHH
Q 008154 126 -----GCCMKICCFG-GEQEIAFFHEYREGVDWVFVDHPS-----YHR--PGNPYGDINGAFGD-NQFRY---TLLCYAA 188 (576)
Q Consensus 126 -----~~~~~~~~~~-~~~~~~~~~~~~~gv~v~~l~~~~-----~~~--~~~~y~~~~~~~~~-~~~r~---~~~~~~~ 188 (576)
...+.|...+ +...+++|+.+++.+++++++... ..+ +..+|++ | ++.|+ .+++.++
T Consensus 175 ~~~a~~~d~~V~g~~~~~~~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~------Ds~elRl~Qeyfl~~ag 248 (750)
T COG0058 175 DAEGVPYDVPVPGYDNRVVTLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPG------DSKELRLKQEYFLGSAG 248 (750)
T ss_pred ccCCceeeeeEEeccCcEEEEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCC------CcHHHHHhhhheeeeHH
Confidence 1223344445 567889999999999999998222 333 6679997 6 77887 5777788
Q ss_pred HhhcccCC-CCCCCCCCccEEEeCCCccchHHHHHHh-----hccCCCCCC---CCcEEEEeecCCCCC--CCChhhhhh
Q 008154 189 CEAPLVLP-LGGFTYGEKCIFLVNDWHAGLVPVLLAS-----KYRPHGVYK---DARSILVIHNLSHQG--VEPAATYKN 257 (576)
Q Consensus 189 ~~~~~~~~-~~~~~~~~pDVvH~~~~~~~~~~~~l~~-----~~~~~~~~~---~~~~v~t~H~~~~~~--~~~~~~~~~ 257 (576)
++.+.+++ .... ..++-+.|+||.|++++..-+-+ +...+..+. ...++||+||+.+.+ .||.+++..
T Consensus 249 vq~I~~~~~~~~~-~~~~~~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~ 327 (750)
T COG0058 249 VQDILARGHLEHH-DLDVLADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKK 327 (750)
T ss_pred HHHHHHHhhhccc-cccchhhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHH
Confidence 77776652 2111 22778999999999987443322 211221111 236799999997776 788888843
Q ss_pred c-CCChhhhcc------ccccccccc-ccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCC
Q 008154 258 L-GLPSEWYGA------LEWVFPTWA-RTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKS 329 (576)
Q Consensus 258 ~-~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~ 329 (576)
+ +........ ........+ +.+..+..+.++|..+|++.|..+++||+.+.+-+.+ ++ ++......+.
T Consensus 328 ~lpr~~~ii~~in~~~l~~~~~~~~~~~~~~~~~i~~v~Ma~lal~~S~~vNGVsklH~el~k~-~~---~~~~~~~~p~ 403 (750)
T COG0058 328 LLPRHLQIIYEINARFLPEVRLLYLGDLIRRGSPIEEVNMAVLALVGSHSVNGVSKLHSELSKK-MW---FADFHGLYPE 403 (750)
T ss_pred HhhhhhhhHHHHHhhhhHHHHhhccccccccCCcccceehhhhhhhhhhhhHhHHHHHHHHHHH-HH---HHHhcccCcc
Confidence 3 211111110 000110111 1112223333999999999999999999999876643 22 1222234478
Q ss_pred ceeEecCCCCCCCCCCCCCccccccCCcC---Cccc------------------------chHhH----HHHHHHcCCCC
Q 008154 330 VLNGITNGIDITEWNPSSDEHIASHYSID---DLSG------------------------KVQCK----IALQKELGLPI 378 (576)
Q Consensus 330 ~i~vi~nGvd~~~~~~~~~~~l~~~~~~~---~~~~------------------------~~~~~----~~~~~~~~i~~ 378 (576)
++.-++|||+...|.......|...+.+. .|.. +..++ .......|+..
T Consensus 404 ~i~nvTNGIt~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~ 483 (750)
T COG0058 404 KINNVTNGITPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEV 483 (750)
T ss_pred ccccccCCcCCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcc
Confidence 89999999999999888777777776655 4432 11111 22333557777
Q ss_pred CCCCCEEEEecccccccCHHHHHHHHHhhhc-------CCcEEEEEeCCChhhHHHHHHHHH--------HhcCceEEEc
Q 008154 379 RPDCPLIGFIGRLDYQKGIDLIRLAAPEILA-------DDIQFVMLGSGDPQFESWMRDTEA--------TYKDKYRGWV 443 (576)
Q Consensus 379 ~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-------~~~~lii~G~g~~~~~~~~~~~~~--------~~~~~~~~~~ 443 (576)
+|+.++++++.|+.+||+..+.+....+|.+ ++++++|+|+++|.+...++.++. ....+++++.
T Consensus 484 ~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~ 563 (750)
T COG0058 484 DPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLP 563 (750)
T ss_pred CCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeC
Confidence 7999999999999999999998877766543 468889999999887766666543 1246789999
Q ss_pred cCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCC---
Q 008154 444 GFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLS--- 518 (576)
Q Consensus 444 ~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d--- 518 (576)
+|+...+..++.+|||+.+.|+ .|++|++.|+||.+|.+.|+|.+|++.|+.+.. +++|||.|....
T Consensus 564 nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~v--------g~~N~~~fG~~~~~v 635 (750)
T COG0058 564 NYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHV--------GGENGWIFGETVEEV 635 (750)
T ss_pred CCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhc--------CCCceEEeCCchhhH
Confidence 9999999999999999999998 799999999999999999999999999999621 179999996531
Q ss_pred -------------HHHHHHHHHHHHHHhhh---CHHHHHHHHHHHH---hhhCCHHHHHHHH-HHHHHHh
Q 008154 519 -------------EESMLTALRFAIRTYRE---HKSSWEGLMRRGM---EKDYTWENAAIQY-EQVFEWA 568 (576)
Q Consensus 519 -------------~~~la~~i~~~l~~~~~---~~~~~~~~~~~a~---~~~fs~~~~~~~y-~~~y~~~ 568 (576)
...+...|..+++...+ .| .|..++++++ ...|+.++|...| .+.|-.+
T Consensus 636 ~~~~~~~~~~~~~y~~~~~~v~~~~~~~~~~~~~p-~~~~~~~~~~~sl~~~~~~dr~~~~yd~~~Y~~a 704 (750)
T COG0058 636 DALRADGYDPNALYYELENEVKPVLDEIIDGRFSP-GWKSRFKNLIDSLLPKFGTDRMMVLYDFKAYVPA 704 (750)
T ss_pred HHHHhcccccHHHHHHHhHHHHHHHHHHhcccCCc-ccHHHHHHHHHHhhhccCccHHHHHHHHHHHHHH
Confidence 11222233334332211 12 5777777774 3358877776666 4455444
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=308.74 Aligned_cols=442 Identities=15% Similarity=0.174 Sum_probs=259.2
Q ss_pred EEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEecCCCCCCcc-cchhcccc-CceeEEEeecCCeeEEEEEEee
Q 008154 70 FVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTAAD-ENFTLAKD-LGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 70 ~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
.+|||.++ ++||+.+++..-|+.+++ .|.+..+|||..++..... +.+..... ...+++ .....++.+++++|.
T Consensus 1 E~sWEVcN--KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~-~~~~~Gl~v~~GRWl 77 (633)
T PF05693_consen 1 EVSWEVCN--KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALE-SMREEGLKVRYGRWL 77 (633)
T ss_dssp EEETTTTS---SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHH-HHHHTT-EEEEEEES
T ss_pred Cchhhhcc--ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHH-HHHhCCCeEEEecee
Confidence 37899998 699999999999999999 7999999999876531110 00000000 000010 123456788999999
Q ss_pred ecC-eEEEEecCCC-CCCCCCCCCCCC-----------CCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCC
Q 008154 147 REG-VDWVFVDHPS-YHRPGNPYGDIN-----------GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW 213 (576)
Q Consensus 147 ~~g-v~v~~l~~~~-~~~~~~~y~~~~-----------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~ 213 (576)
++| +.++++|..+ +....++++..| ++| ++...|.++...+++.+...... ...-|.|+|||
T Consensus 78 I~G~P~vIL~D~~s~~~~ldeik~~lW~~~gIdS~~~~~dy-nea~~Fgyava~fi~~f~~~~~~----~~~ViaHfHEW 152 (633)
T PF05693_consen 78 IPGRPIVILFDFGSFFWKLDEIKGELWELFGIDSPHGDGDY-NEAVMFGYAVAWFIEEFYKFYEE----KPKVIAHFHEW 152 (633)
T ss_dssp STT--EEEEEEGGGGGGGHHHHHHHHHHHH-----TT-HHH-HHHHHHHHHHHHHHHHHHHH-S-----SEEEEEEEESG
T ss_pred ECCcCeEEEEeCchHHHHHHHHHHHHHHHcCCCCCCCCcch-hHHHHHHHHHHHHHHHHHHhhcC----CCcEEEEechH
Confidence 998 7788888433 222333333333 233 44556666666666655443221 25679999999
Q ss_pred ccchHHHHHHhhccCCCCCCCCcEEEEeecCC------CCC---------CCChhhhhhcCCChhhhccccccccccccc
Q 008154 214 HAGLVPVLLASKYRPHGVYKDARSILVIHNLS------HQG---------VEPAATYKNLGLPSEWYGALEWVFPTWART 278 (576)
Q Consensus 214 ~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (576)
+++....+++++. +.+.+|||||++. ..+ +.++++...+++
T Consensus 153 maG~gll~lr~~~------~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i------------------ 208 (633)
T PF05693_consen 153 MAGVGLLYLRKRK------PDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNI------------------ 208 (633)
T ss_dssp GGTTHHHHHHHTT-------SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-------------------
T ss_pred hHhHHHHHHhccC------CCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccc------------------
Confidence 9999888888876 7899999999983 100 001111112222
Q ss_pred ccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcC
Q 008154 279 HALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSID 358 (576)
Q Consensus 279 ~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~ 358 (576)
....++|+.|++.||++++||+.++.|+. .++.+.++ .|+|||++...|.....- ...
T Consensus 209 -----~~k~~iEraaA~~AdvFTTVSeITa~Ea~---------~LL~r~pD--vV~pNGl~v~~~~~~~ef------qnl 266 (633)
T PF05693_consen 209 -----YHKHSIERAAAHYADVFTTVSEITAKEAE---------HLLKRKPD--VVTPNGLNVDKFPALHEF------QNL 266 (633)
T ss_dssp -----HHHHHHHHHHHHHSSEEEESSHHHHHHHH---------HHHSS--S--EE----B-GGGTSSTTHH------HHH
T ss_pred -----hHHHHHHHHHHHhcCeeeehhhhHHHHHH---------HHhCCCCC--EEcCCCccccccccchHH------HHH
Confidence 12357999999999999999999999984 35565555 799999998766543210 000
Q ss_pred CcccchHhHHHHHHH-cCC-CCC-CCCCEEEEecccc-cccCHHHHHHHHHhhhc----C--C---cEEEEEeCCC----
Q 008154 359 DLSGKVQCKIALQKE-LGL-PIR-PDCPLIGFIGRLD-YQKGIDLIRLAAPEILA----D--D---IQFVMLGSGD---- 421 (576)
Q Consensus 359 ~~~~~~~~~~~~~~~-~~i-~~~-~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~----~--~---~~lii~G~g~---- 421 (576)
.-.++..-.+..+.. +|- ..+ ++.+++..+||++ .+||+|.+|+|+.+|.. . + +-|+|+=...
T Consensus 267 ~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ 346 (633)
T PF05693_consen 267 HAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFN 346 (633)
T ss_dssp HHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-
T ss_pred HHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcC
Confidence 001122222233332 231 111 3578889999999 79999999999999854 1 2 2344432110
Q ss_pred h----------hh----HHHHHHHHH------------------------------------------------------
Q 008154 422 P----------QF----ESWMRDTEA------------------------------------------------------ 433 (576)
Q Consensus 422 ~----------~~----~~~~~~~~~------------------------------------------------------ 433 (576)
. .. .+.++.+.+
T Consensus 347 ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpI 426 (633)
T PF05693_consen 347 VESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPI 426 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHH
Confidence 0 00 000000100
Q ss_pred -------------HhcCceEEEccC-C--hh----HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcccccc
Q 008154 434 -------------TYKDKYRGWVGF-N--VP----ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRD 493 (576)
Q Consensus 434 -------------~~~~~~~~~~~~-~--~~----~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e 493 (576)
..++++++...| + +. .-.+++.+||+.|+||+|||||+|++|+.++|+|.|+|+..|+..
T Consensus 427 Ln~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~ 506 (633)
T PF05693_consen 427 LNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGC 506 (633)
T ss_dssp HHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHH
T ss_pred HHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHH
Confidence 000223322222 0 00 012456999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCcceeEe---CCCCHHHHHHHHHHHHHHhhh-CHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 494 TVENFNPFAREGSGEGTGWSF---LPLSEESMLTALRFAIRTYRE-HKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 494 ~i~~~~~~~~~~~~~~~G~~~---~~~d~~~la~~i~~~l~~~~~-~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
++.+..... ...|+.+ ...++++.+++|.+.+..+.. +++++..+..++ +++.++|+++...|.++|+.
T Consensus 507 ~~~~~~~~~-----~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~ 581 (633)
T PF05693_consen 507 WMQEHIEDP-----EEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDL 581 (633)
T ss_dssp HHHTTS-HH-----GGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHH
T ss_pred HHHHhhccC-----cCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 988632211 2345554 445789999999999987754 455555555555 67899999999999999998
Q ss_pred hhh
Q 008154 568 ASI 570 (576)
Q Consensus 568 ~~~ 570 (576)
+++
T Consensus 582 AL~ 584 (633)
T PF05693_consen 582 ALR 584 (633)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=281.18 Aligned_cols=330 Identities=20% Similarity=0.202 Sum_probs=226.8
Q ss_pred ceEEEEeeccCC--ccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 66 YNIVFVTAEAAP--YSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 66 mkI~~~s~e~~P--~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
|||++++..+.| ....||.++++.+++++|.+.||+|.++++.......
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~----------------------------- 51 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAA----------------------------- 51 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCccc-----------------------------
Confidence 899999998643 1358999999999999999999999999975322100
Q ss_pred EeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 144 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 144 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
............. .. ..............+.+... +|||||+|.+..... +.
T Consensus 52 -------~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~--------~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 52 -------PLVPVVPEPLRLD--AP--------GRDRAEAEALALAERALAAG--------DFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred -------ceeeccCCCcccc--cc--------hhhHhhHHHHHHHHHHHhcC--------CCCEEEecCcccchh---hh
Confidence 0000000000000 00 00011111112222222222 799999998776654 12
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
+. .++|+|+|.|+....... ........++.++++
T Consensus 104 -~~------~~~~~v~~~h~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~ 138 (335)
T cd03802 104 -RP------LPVPVVTTLHGPPDPELL--------------------------------------KLYYAARPDVPFVSI 138 (335)
T ss_pred -cc------cCCCEEEEecCCCCcccc--------------------------------------hHHHhhCcCCeEEEe
Confidence 11 578999999976321000 012234567889999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|+...+... . ..++.+||||+|.+.|.+.. .+..
T Consensus 139 s~~~~~~~~------------~--~~~~~vi~ngvd~~~~~~~~--------------------------------~~~~ 172 (335)
T cd03802 139 SDAQRRPWP------------P--LPWVATVHNGIDLDDYPFRG--------------------------------PKGD 172 (335)
T ss_pred cHHHHhhcc------------c--ccccEEecCCcChhhCCCCC--------------------------------CCCC
Confidence 987665432 1 16789999999988776522 2456
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHH--hcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
.++|+||+.+.||++.+++++.+. +++++|+|+++. .........+. ...++.+....+.+....+++.+|+++
T Consensus 173 ~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~-~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v 248 (335)
T cd03802 173 YLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSD-PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALL 248 (335)
T ss_pred EEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCC-HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEE
Confidence 899999999999999999998764 799999999953 23333333333 245555444335555668999999999
Q ss_pred eCCCC-CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHH
Q 008154 462 MPSRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSW 540 (576)
Q Consensus 462 ~ps~~-E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~ 540 (576)
+||.+ |+||++++||||||+|||+++.||..|.+.+ +.+|+++++ +++++++|.++.. .+.
T Consensus 249 ~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~----------~~~g~l~~~--~~~l~~~l~~l~~----~~~-- 310 (335)
T cd03802 249 FPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVED----------GVTGFLVDS--VEELAAAVARADR----LDR-- 310 (335)
T ss_pred eCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeC----------CCcEEEeCC--HHHHHHHHHHHhc----cHH--
Confidence 99984 9999999999999999999999999999998 789999975 8999999988754 221
Q ss_pred HHHHHHHHhhhCCHHHHHHHHHHHHH
Q 008154 541 EGLMRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 541 ~~~~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
+.+++.+.++|||++++++|.++|+
T Consensus 311 -~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 311 -AACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred -HHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 2233445689999999999999984
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=288.88 Aligned_cols=212 Identities=13% Similarity=0.084 Sum_probs=153.0
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
.+.++.++++|+++++.+. ..++ ..++.+||||||++.+.+.... ...
T Consensus 188 ~~~~~~iV~~S~~l~~~~~---------~~~~--~~~i~vI~NGid~~~~~~~~~~------------------~~~--- 235 (405)
T PRK10125 188 LALGCQFISPSQHVADAFN---------SLYG--PGRCRIINNGIDMATEAILAEL------------------PPV--- 235 (405)
T ss_pred hhcCcEEEEcCHHHHHHHH---------HHcC--CCCEEEeCCCcCcccccccccc------------------ccc---
Confidence 3456889999999887753 1222 4689999999997533221100 000
Q ss_pred cCCCCCCCCCEEEEeccc-c-cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC--ChhH
Q 008154 374 LGLPIRPDCPLIGFIGRL-D-YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF--NVPI 449 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~-~-~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 449 (576)
..+ ++..+|+++|+. . +.||++.+++|+..+. ++++|+++|++++.. ..++. ..++ +...
T Consensus 236 -~~~--~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~-~~g~~~~~~~ 299 (405)
T PRK10125 236 -RET--QGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVV-NHGFETDKRK 299 (405)
T ss_pred -ccC--CCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceE-EecCcCCHHH
Confidence 001 356789999994 3 6799999999999874 579999999985321 11222 2333 3445
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
+..+|+.+|++|+||.+|+||++++||||||+|||+|+.||.+|++.+ .+|++++++|++++++.+...
T Consensus 300 l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~-----------~~G~lv~~~d~~~La~~~~~~ 368 (405)
T PRK10125 300 LMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQK-----------SGGKTVSEEEVLQLAQLSKPE 368 (405)
T ss_pred HHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeC-----------CcEEEECCCCHHHHHhccCHH
Confidence 668999999999999999999999999999999999999999999876 499999999999999854432
Q ss_pred HHHhhhCHHH--HHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Q 008154 530 IRTYREHKSS--WEGLMRRGMEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 530 l~~~~~~~~~--~~~~~~~a~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+. +... ....+++.+.++||++.|+++|+++|+++
T Consensus 369 ~~----~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 369 IA----QAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred HH----HHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 21 1100 01112333567899999999999999863
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=286.43 Aligned_cols=381 Identities=13% Similarity=0.080 Sum_probs=232.0
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCC-CcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 142 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (576)
++|||++||..|+|+ .+|+.+....++..|+++| |+|++|.|.++.... ...+... ..+..+. .+..+++.
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~-~~~~~~~----~~f~~~~-~~e~~~~~ 74 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQ-KLVYPNK----ITFSSPS-EQEAYVRQ 74 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccc-ccccccc----ccccCch-hhhhhhhh
Confidence 469999999999996 7999999999999999999 899999998764311 0111100 0000000 00111111
Q ss_pred EEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCC-ccchH--H
Q 008154 143 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW-HAGLV--P 219 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~-~~~~~--~ 219 (576)
|. +-++++++..++. .|.+. | ....+.......+.+.+... +|||||+|+. +.+.. +
T Consensus 75 ~~----~~~v~r~~s~~~p----~yp~r---~-~~~~r~~~~~~~i~~~l~~~--------~pDVIHv~tP~~LG~~~~g 134 (462)
T PLN02846 75 WL----EERISFLPKFSIK----FYPGK---F-STDKRSILPVGDISETIPDE--------EADIAVLEEPEHLTWYHHG 134 (462)
T ss_pred hc----cCeEEEecccccc----cCccc---c-cccccccCChHHHHHHHHhc--------CCCEEEEcCchhhhhHHHH
Confidence 11 1123333322211 12210 0 00011111222333443323 8999999973 33332 1
Q ss_pred HHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcC--CChhhhcccccccccccccccCCcCccchhHHHHHHhc
Q 008154 220 VLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLG--LPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297 (576)
Q Consensus 220 ~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 297 (576)
..+.++ ..+ +|.|.|+.. .+..++.+ .....+....+ .+.+. .+|
T Consensus 135 ~~~~~k-------~~~-vV~tyHT~y------~~Y~~~~~~g~~~~~l~~~~~-----------------~~~~r--~~~ 181 (462)
T PLN02846 135 KRWKTK-------FRL-VIGIVHTNY------LEYVKREKNGRVKAFLLKYIN-----------------SWVVD--IYC 181 (462)
T ss_pred HHHHhc-------CCc-EEEEECCCh------HHHHHHhccchHHHHHHHHHH-----------------HHHHH--Hhc
Confidence 222221 234 888999841 11111111 10111111000 11111 248
Q ss_pred cceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCC
Q 008154 298 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLP 377 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 377 (576)
|.++++|....+ + . ..+...++|||...|.+.... .++..+ +
T Consensus 182 d~vi~pS~~~~~-l-------------~---~~~i~~v~GVd~~~f~~~~~~--------------------~~~~~~-~ 223 (462)
T PLN02846 182 HKVIRLSAATQD-Y-------------P---RSIICNVHGVNPKFLEIGKLK--------------------LEQQKN-G 223 (462)
T ss_pred CEEEccCHHHHH-H-------------h---hCEEecCceechhhcCCCccc--------------------HhhhcC-C
Confidence 999999974432 2 1 123445689998877655321 112222 2
Q ss_pred CCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh
Q 008154 378 IRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 455 (576)
Q Consensus 378 ~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 455 (576)
++.-...++|+||+.+.||++.|++|++.+.+ ++++|+|+|+|+ ..++..+ ..........++.++.... .+++
T Consensus 224 ~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp-~~~~L~~-~a~~l~l~~~vf~G~~~~~--~~~~ 299 (462)
T PLN02846 224 EQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE-DSDEVKA-AAEKLELDVRVYPGRDHAD--PLFH 299 (462)
T ss_pred CCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc-cHHHHHH-HHHhcCCcEEEECCCCCHH--HHHH
Confidence 11113468999999999999999999999865 589999999996 3344444 4444443444477764432 6999
Q ss_pred cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhh
Q 008154 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535 (576)
Q Consensus 456 ~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~ 535 (576)
.+|+||+||.+|++|++++||||||+|||+++.++ .+++.+ +.+|+.+ .|.+++++++.+++..
T Consensus 300 ~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~----------~~ng~~~--~~~~~~a~ai~~~l~~--- 363 (462)
T PLN02846 300 DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQ----------FPNCRTY--DDGKGFVRATLKALAE--- 363 (462)
T ss_pred hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeec----------CCceEec--CCHHHHHHHHHHHHcc---
Confidence 99999999999999999999999999999999997 588887 8899988 4789999999999862
Q ss_pred CHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 008154 536 HKSSWEGLMRRGMEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 536 ~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~ 567 (576)
+++.. ..+ ..+.|||+..++++.+.|+-
T Consensus 364 ~~~~~---~~~-a~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 364 EPAPL---TDA-QRHELSWEAATERFLRVADL 391 (462)
T ss_pred CchhH---HHH-HHHhCCHHHHHHHHHHHhcc
Confidence 33222 222 23599999999999999974
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=282.03 Aligned_cols=360 Identities=15% Similarity=0.074 Sum_probs=235.7
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++|+..+ + .||+++++.++++.|.+.||+|.++++.-..+ .+...-. + ...
T Consensus 1 ki~~~~~~~-~---~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~-----~~~~~~~----~--------------~~~ 53 (372)
T cd03792 1 KVLHVNSTP-Y---GGGVAEILHSLVPLMRDLGVDTRWEVIKGDPE-----FFNVTKK----F--------------HNA 53 (372)
T ss_pred CeEEEeCCC-C---CCcHHHHHHHHHHHHHHcCCCceEEecCCChh-----HHHHHHH----h--------------hHh
Confidence 699998763 3 69999999999999999999999998742211 1110000 0 000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..|.+. + .....+..+.. ......... ....+|||||+|++.+..++.... .
T Consensus 54 ~~g~~~--------------~-------~~~~~~~~~~~-~~~~~~~~~----~~~~~~Dvv~~h~~~~~~~~~~~~--~ 105 (372)
T cd03792 54 LQGADI--------------E-------LSEEEKEIYLE-WNEENAERP----LLDLDADVVVIHDPQPLALPLFKK--K 105 (372)
T ss_pred hcCCCC--------------C-------CCHHHHHHHHH-HHHHHhccc----cccCCCCEEEECCCCchhHHHhhh--c
Confidence 001111 0 01111111111 111111100 112279999999877433222211 1
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.++|+|+++|+..... .... ..+.+..++.+|.+++.|+.
T Consensus 106 ------~~~~~i~~~H~~~~~~------------~~~~----------------------~~~~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 106 ------RGRPWIWRCHIDLSSP------------NRRV----------------------WDFLQPYIEDYDAAVFHLPE 145 (372)
T ss_pred ------CCCeEEEEeeeecCCC------------cHHH----------------------HHHHHHHHHhCCEEeecHHH
Confidence 3689999999752110 0000 12334556788998888742
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
... . .....++ +||||||........ .........++.++++ ++.++|+
T Consensus 146 ~~~------------~--~~~~~~~-vipngvd~~~~~~~~--------------~~~~~~~~~~~~~~~~--~~~~~i~ 194 (372)
T cd03792 146 YVP------------P--QVPPRKV-IIPPSIDPLSGKNRE--------------LSPADIEYILEKYGID--PERPYIT 194 (372)
T ss_pred hcC------------C--CCCCceE-EeCCCCCCCccccCC--------------CCHHHHHHHHHHhCCC--CCCcEEE
Confidence 221 1 1123344 999999964311111 0111244567778876 5788999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChh---hHHHHHHHHH--HhcCceEEEccC--ChhHHHHHHhcC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ---FESWMRDTEA--TYKDKYRGWVGF--NVPISHRITAGC 457 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~---~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~ll~~~ 457 (576)
++||+.+.||++.+++|+..+.+ ++++|+++|+|+.. .....+.+.+ ....++.++... +.+.+..+++.+
T Consensus 195 ~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~a 274 (372)
T cd03792 195 QVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRAS 274 (372)
T ss_pred EEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhC
Confidence 99999999999999999999865 58999999998532 2222333332 223344433322 556777899999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCH
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHK 537 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~ 537 (576)
|++++||.+|+||++++||||||+|||+++.|+..+.+.+ +.+|++++ +.++++++|.+++. ++
T Consensus 275 d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~----------~~~g~~~~--~~~~~a~~i~~ll~----~~ 338 (372)
T cd03792 275 TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIED----------GETGFLVD--TVEEAAVRILYLLR----DP 338 (372)
T ss_pred eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhccc----------CCceEEeC--CcHHHHHHHHHHHc----CH
Confidence 9999999999999999999999999999999999999988 89999986 45677777777764 78
Q ss_pred HHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHh
Q 008154 538 SSWEGLMRRG---MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 538 ~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+.+.+|++++ +.++|+|+.++++|.++|+.+
T Consensus 339 ~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 339 ELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 8888888877 356899999999999999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-32 Score=279.20 Aligned_cols=356 Identities=19% Similarity=0.191 Sum_probs=236.2
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++.+++| ...||+++++.+++++|+++||+|.+++........ ...
T Consensus 1 ~i~~i~~~~~~-~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~-----------------------------~~~ 50 (363)
T cd04955 1 KIAIIGTRGIP-AKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK-----------------------------ETE 50 (363)
T ss_pred CeEEEecCcCC-cccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc-----------------------------ccc
Confidence 69999887666 358999999999999999999999999865322110 112
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..|++++.++.+.... . ..+..-......... . ..++|++|............+. .
T Consensus 51 ~~~i~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~-~------~~~~~~i~~~~~~~~~~~~~~~--~ 106 (363)
T cd04955 51 YNGVRLIHIPAPEIGG----L-----------GTIIYDILAILHALF-V------KRDIDHVHALGPAIAPFLPLLR--L 106 (363)
T ss_pred cCCceEEEcCCCCccc----h-----------hhhHHHHHHHHHHHh-c------cCCeEEEEecCccHHHHHHHHH--h
Confidence 2577877775332110 0 000000011111111 0 0145555554433322222221 1
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.++|+++++|+..+... ..+.....+ ...+++.+++.||.++++|+.
T Consensus 107 ------~~~~~v~~~h~~~~~~~-------~~~~~~~~~--------------------~~~~~~~~~~~ad~ii~~s~~ 153 (363)
T cd04955 107 ------KGKKVVVNMDGLEWKRA-------KWGRPAKRY--------------------LKFGEKLAVKFADRLIADSPG 153 (363)
T ss_pred ------cCCCEEEEccCcceeec-------ccccchhHH--------------------HHHHHHHHHhhccEEEeCCHH
Confidence 46899999997532110 000000000 012456678899999999999
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+. ..++.. ..+||||+|...+.+. ....+..+++ +...++
T Consensus 154 ~~~~~~---------~~~~~~---~~~i~ngv~~~~~~~~---------------------~~~~~~~~~~---~~~~i~ 197 (363)
T cd04955 154 IKEYLK---------EKYGRD---STYIPYGADHVVSSEE---------------------DEILKKYGLE---PGRYYL 197 (363)
T ss_pred HHHHHH---------HhcCCC---CeeeCCCcChhhcchh---------------------hhhHHhcCCC---CCcEEE
Confidence 887763 122222 2899999997765431 1223344544 335688
Q ss_pred EecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHH--HhcCceEEEccC-ChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEA--TYKDKYRGWVGF-NVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~p 463 (576)
++||+.+.||++.+++|+..+.. +++|+++|+++. .....+.+.+ ....++. +.|+ +.+....+++.+|++++|
T Consensus 198 ~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~-~~~~~~~~~~~~~~~~~V~-~~g~~~~~~~~~~~~~ad~~v~p 274 (363)
T cd04955 198 LVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADH-NTPYGKLLKEKAAADPRII-FVGPIYDQELLELLRYAALFYLH 274 (363)
T ss_pred EEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCC-cchHHHHHHHHhCCCCcEE-EccccChHHHHHHHHhCCEEEeC
Confidence 99999999999999999998865 899999999843 2333334432 2334454 4444 555566899999999999
Q ss_pred CCC-CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 464 SRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 464 s~~-E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
|.. |++|++++|||+||+|||+|+.|+..|.+.+ +|+.++++|. ++++|..++. +++.+.+
T Consensus 275 s~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~------------~g~~~~~~~~--l~~~i~~l~~----~~~~~~~ 336 (363)
T cd04955 275 GHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD------------KAIYFKVGDD--LASLLEELEA----DPEEVSA 336 (363)
T ss_pred CccCCCCChHHHHHHHcCCCEEEecCCccceeecC------------CeeEecCchH--HHHHHHHHHh----CHHHHHH
Confidence 998 9999999999999999999999999998853 7888887665 8888888875 7777788
Q ss_pred HHHHH---HhhhCCHHHHHHHHHHHHH
Q 008154 543 LMRRG---MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 543 ~~~~a---~~~~fs~~~~~~~y~~~y~ 566 (576)
+++++ +.++|||+.++++|.++|+
T Consensus 337 ~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 337 MAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 87776 3457999999999999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=280.11 Aligned_cols=338 Identities=21% Similarity=0.247 Sum_probs=235.4
Q ss_pred ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCC
Q 008154 80 KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS 159 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~ 159 (576)
..||+++++.+++++|++.||+|.++++.... . ... ...+++++.++...
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~---~-~~~--------------------------~~~~~~~~~~~~~~ 57 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRL---V-AEL--------------------------EAEGSRHIKLPFIS 57 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCch---H-HHH--------------------------HhcCCeEEEccccc
Confidence 35999999999999999999999999853211 0 000 01234444332110
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEE
Q 008154 160 YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSIL 239 (576)
Q Consensus 160 ~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ 239 (576)
. ..+ ..........+.+... +||+||+|.....+...+.... .++|+|+
T Consensus 58 ---~-~~~------------~~~~~~~~l~~~~~~~--------~~dii~~~~~~~~~~~~~~~~~-------~~~~~i~ 106 (355)
T cd03819 58 ---K-NPL------------RILLNVARLRRLIREE--------KVDIVHARSRAPAWSAYLAARR-------TRPPFVT 106 (355)
T ss_pred ---c-chh------------hhHHHHHHHHHHHHHc--------CCCEEEECCCchhHHHHHHHHh-------cCCCEEE
Confidence 0 001 1111111222222222 7999999987666655544432 4699999
Q ss_pred EeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcc
Q 008154 240 VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG 319 (576)
Q Consensus 240 t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~ 319 (576)
+.|+.... . .+....++.+|.++++|+...+.+.
T Consensus 107 ~~h~~~~~-----~----------------------------------~~~~~~~~~~~~vi~~s~~~~~~~~------- 140 (355)
T cd03819 107 TVHGFYSV-----N----------------------------------FRYNAIMARGDRVIAVSNFIADHIR------- 140 (355)
T ss_pred EeCCchhh-----H----------------------------------HHHHHHHHhcCEEEEeCHHHHHHHH-------
Confidence 99964210 0 0223445789999999998887763
Q ss_pred hhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHH
Q 008154 320 LHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDL 399 (576)
Q Consensus 320 l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ 399 (576)
..++.+..++.+||||+|...|.+.... ......+++.++.+ ++.++++++||+.+.||++.
T Consensus 141 --~~~~~~~~k~~~i~ngi~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~~~ 202 (355)
T cd03819 141 --ENYGVDPDRIRVIPRGVDLDRFDPGAVP--------------PERILALAREWPLP--KGKPVILLPGRLTRWKGQEV 202 (355)
T ss_pred --HhcCCChhhEEEecCCccccccCccccc--------------hHHHHHHHHHcCCC--CCceEEEEeeccccccCHHH
Confidence 2345556789999999998877553321 00112256666665 56789999999999999999
Q ss_pred HHHHHHhhhc--CCcEEEEEeCCChh--hHHH-HHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeCC-CCCCCcHH
Q 008154 400 IRLAAPEILA--DDIQFVMLGSGDPQ--FESW-MRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMPS-RFEPCGLN 472 (576)
Q Consensus 400 ll~a~~~L~~--~~~~lii~G~g~~~--~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps-~~E~~g~s 472 (576)
+++++..+.+ ++++++|+|.++.. ..+. .+.+.+. ...++ .+.++.. .+..+++.||++++|| ..|++|++
T Consensus 203 li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v-~~~g~~~-~~~~~l~~ad~~i~ps~~~e~~~~~ 280 (355)
T cd03819 203 FIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRV-TFVGHCS-DMPAAYALADIVVSASTEPEAFGRT 280 (355)
T ss_pred HHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceE-EEcCCcc-cHHHHHHhCCEEEecCCCCCCCchH
Confidence 9999999977 68999999998532 1111 2222221 22334 4566643 4568999999999999 78999999
Q ss_pred HHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---Hh
Q 008154 473 QLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---ME 549 (576)
Q Consensus 473 ~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~ 549 (576)
++|||++|+|||+++.|+..|.+.+ +.+|++++++|+++++++|..++. .+++.+.++++++ +.
T Consensus 281 l~EA~a~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~~~~~l~~~i~~~~~---~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 281 AVEAQAMGRPVIASDHGGARETVRP----------GETGLLVPPGDAEALAQALDQILS---LLPEGRAKMFAKARMCVE 347 (355)
T ss_pred HHHHHhcCCCEEEcCCCCcHHHHhC----------CCceEEeCCCCHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988 789999999999999999986665 3677888888877 56
Q ss_pred hhCCHHHH
Q 008154 550 KDYTWENA 557 (576)
Q Consensus 550 ~~fs~~~~ 557 (576)
++|||++|
T Consensus 348 ~~f~~~~~ 355 (355)
T cd03819 348 TLFSYDRM 355 (355)
T ss_pred HhhhhccC
Confidence 79999864
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=294.50 Aligned_cols=228 Identities=15% Similarity=0.094 Sum_probs=168.4
Q ss_pred cceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH-HcCC
Q 008154 298 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK-ELGL 376 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~i 376 (576)
+.++++|...++.+. ..++.+..++.+||||||...|.+.... .....+ ...+
T Consensus 460 ~i~Vs~S~~~~~~l~---------~~~g~~~~kI~VI~NGVd~~~f~~~~~~-----------------~~~~~~~~~~~ 513 (694)
T PRK15179 460 VALSSNSQFAAHRYA---------DWLGVDERRIPVVYNGLAPLKSVQDDAC-----------------TAMMAQFDART 513 (694)
T ss_pred eEEEeCcHHHHHHHH---------HHcCCChhHEEEECCCcCHHhcCCCchh-----------------hHHHHhhcccc
Confidence 345555555444432 2345566789999999998777643211 111111 1122
Q ss_pred CCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH
Q 008154 377 PIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT 454 (576)
Q Consensus 377 ~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 454 (576)
+ ++.++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+|+ ..+...+.+.+..-.+.+.+.|+..+ +..+|
T Consensus 514 ~--~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~-~~~~L~~l~~~lgL~~~V~flG~~~d-v~~ll 589 (694)
T PRK15179 514 S--DARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP-LLESVREFAQRLGMGERILFTGLSRR-VGYWL 589 (694)
T ss_pred C--CCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc-chHHHHHHHHHcCCCCcEEEcCCcch-HHHHH
Confidence 3 356799999999999999999999998865 589999999985 23444444443322344456777654 55899
Q ss_pred hcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCC--HHHHHHHHHHHHHH
Q 008154 455 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRT 532 (576)
Q Consensus 455 ~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~la~~i~~~l~~ 532 (576)
+.+|++|+||.+|+||++++|||+||+|||+|+.||..|++.+ +.+|++++++| +++++++|.+++..
T Consensus 590 ~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~d----------g~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 590 TQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQE----------GVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred HhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccC----------CCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999998 89999998776 46899999998875
Q ss_pred hhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 008154 533 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
...+++... .+++.+.++|||++++++|.++|+
T Consensus 660 l~~~~~l~~-~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 660 CAADPGIAR-KAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hhccHHHHH-HHHHHHHHhCCHHHHHHHHHHHhC
Confidence 544554332 233335679999999999999995
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-31 Score=276.64 Aligned_cols=229 Identities=16% Similarity=0.137 Sum_probs=168.5
Q ss_pred hccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH--H
Q 008154 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK--E 373 (576)
Q Consensus 296 ~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~ 373 (576)
.+| ++++|..+.+.+. ..+..+..++.+||||||++.|.+.... ....++ .
T Consensus 339 ~sd-~v~~s~~v~~~l~---------~~lgip~~KI~VIyNGVD~~rf~p~~~~-----------------~~~~r~~~~ 391 (578)
T PRK15490 339 GVD-FMSNNHCVTRHYA---------DWLKLEAKHFQVVYNGVLPPSTEPSSEV-----------------PHKIWQQFT 391 (578)
T ss_pred cch-hhhccHHHHHHHH---------HHhCCCHHHEEEEeCCcchhhcCccchh-----------------hHHHHHHhh
Confidence 344 5566666555542 2345678899999999998887765321 111222 2
Q ss_pred cCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHH
Q 008154 374 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPIS 450 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 450 (576)
.+++ ++.++|+++||+.+.||+..+++++.++.+ ++++|+|+|+|+ ..++..+.+.+. +..++ .+.|+..+ +
T Consensus 392 ~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~-~~eeLk~la~elgL~d~V-~FlG~~~D-v 466 (578)
T PRK15490 392 QKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD-LRAEAQKRAEQLGILERI-LFVGASRD-V 466 (578)
T ss_pred hccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch-hHHHHHHHHHHcCCCCcE-EECCChhh-H
Confidence 3344 456799999999999999999999988765 589999999995 234444444432 23344 46666444 5
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHH
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 530 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l 530 (576)
..+|+.+|++|+||.+|+||++++|||++|+|||+|+.||..|.+.+ +.+|++++++|++++++++..+.
T Consensus 467 ~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d----------G~nG~LVp~~D~~aLa~ai~lA~ 536 (578)
T PRK15490 467 GYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIE----------GVSGFILDDAQTVNLDQACRYAE 536 (578)
T ss_pred HHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHccc----------CCcEEEECCCChhhHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999998 99999999999988888774322
Q ss_pred HHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~ 567 (576)
... +.......+++++ +.++|||++|+++|.++|..
T Consensus 537 aL~-~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 537 KLV-NLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 211 1223333454544 56799999999999999964
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-32 Score=278.54 Aligned_cols=351 Identities=20% Similarity=0.185 Sum_probs=240.6
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++.. + ..||.++++..++++|.++||+|++++.....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~~---------------------------------- 42 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKKA---------------------------------- 42 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecch----------------------------------
Confidence 899999863 3 25999999999999999999999999864210
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
..+ .+ ...+|||||+|.+...........+
T Consensus 43 --------------~~~----------------------------~~--------~~~~~diih~~~~~~~~~~~~~~~~ 72 (365)
T cd03825 43 --------------LIS----------------------------KI--------EIINADIVHLHWIHGGFLSIEDLSK 72 (365)
T ss_pred --------------hhh----------------------------Ch--------hcccCCEEEEEccccCccCHHHHHH
Confidence 000 00 0117999999986655543333332
Q ss_pred ccCCCCCCCCcEEEEeecCCCCC---CCChhhhhhcCCChhhhcccccccccccccccCCc-CccchhHHHHH-Hhccce
Q 008154 226 YRPHGVYKDARSILVIHNLSHQG---VEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT-GEAVNVLKGAI-VTADRL 300 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~-~~ad~v 300 (576)
.. .++|+|+|+|+..... .++.....+.. ......... ....... ...+......+ ..++.+
T Consensus 73 ~~-----~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (365)
T cd03825 73 LL-----DRKPVVWTLHDMWPFTGGCHYPGGCDRYKT-ECGNCPQLG-------SYPEKDLSRWIWRRKRKAWADLNLTI 139 (365)
T ss_pred HH-----cCCCEEEEcccCcccccccCCccccccccc-cCCCCCCCC-------CCCcccHHHHHHHHHHHHhccCCcEE
Confidence 21 3789999999863211 01000000000 000000000 0000000 00011111122 456788
Q ss_pred eccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCC
Q 008154 301 LTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRP 380 (576)
Q Consensus 301 ~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (576)
+++|+...+.+. +....+..++.++|||+|.+.+.+.. +...++..+++ +
T Consensus 140 v~~s~~~~~~~~---------~~~~~~~~~~~vi~ngi~~~~~~~~~-------------------~~~~~~~~~~~--~ 189 (365)
T cd03825 140 VAPSRWLADCAR---------SSSLFKGIPIEVIPNGIDTTIFRPRD-------------------KREARKRLGLP--A 189 (365)
T ss_pred EehhHHHHHHHH---------hccccCCCceEEeCCCCcccccCCCc-------------------HHHHHHHhCCC--C
Confidence 999988776653 22223457899999999988776544 34556777776 4
Q ss_pred CCCEEEEeccccc--ccCHHHHHHHHHhhhc---CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCC-hhHHHHHH
Q 008154 381 DCPLIGFIGRLDY--QKGIDLIRLAAPEILA---DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN-VPISHRIT 454 (576)
Q Consensus 381 ~~~~i~~~Gr~~~--~Kg~~~ll~a~~~L~~---~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll 454 (576)
+..++++.|+... .||++.+++|+..+.+ ++++++++|.+++.... ....++.+....+ .+....++
T Consensus 190 ~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~~ 262 (365)
T cd03825 190 DKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLALIY 262 (365)
T ss_pred CCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHHHH
Confidence 5667777777765 8999999999999976 68999999998642211 2233444333334 55667899
Q ss_pred hcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhh
Q 008154 455 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYR 534 (576)
Q Consensus 455 ~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~ 534 (576)
+.||++++||..|++|++++|||++|+|||+++.|+..|.+.+ +.+|+++++.|++++++++.+++.
T Consensus 263 ~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~----------~~~g~~~~~~~~~~~~~~l~~l~~--- 329 (365)
T cd03825 263 SAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDH----------GVTGYLAKPGDPEDLAEGIEWLLA--- 329 (365)
T ss_pred HhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeC----------CCceEEeCCCCHHHHHHHHHHHHh---
Confidence 9999999999999999999999999999999999999999988 789999999999999999999875
Q ss_pred hCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHh
Q 008154 535 EHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 535 ~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+++.+.++++++ +.++|||++++++|.++|+++
T Consensus 330 -~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 330 -DPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred -CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 777777777776 456899999999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=281.15 Aligned_cols=348 Identities=15% Similarity=0.129 Sum_probs=231.8
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhC--CCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
|||++++.. .| ..||+++++.+++++|.++ ||+|.++++...... ....
T Consensus 1 mkI~~~~~~-~~--~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~---~~~~----------------------- 51 (359)
T PRK09922 1 MKIAFIGEA-VS--GFGGMETVISNVINTFEESKINCEMFFFCRNDKMDK---AWLK----------------------- 51 (359)
T ss_pred CeeEEeccc-cc--CCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCCh---HHHH-----------------------
Confidence 899999875 34 2599999999999999999 899999987543210 0000
Q ss_pred EeeecCeEEE-EecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 144 HEYREGVDWV-FVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 144 ~~~~~gv~v~-~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
.+... .+++.... .+. .... .....+.++.. +|||||+|+..+.+....+
T Consensus 52 -----~~~~~~~~~~~~~~----~~~--------~~~~----~~~l~~~l~~~--------~~Dii~~~~~~~~~~~~~~ 102 (359)
T PRK09922 52 -----EIKYAQSFSNIKLS----FLR--------RAKH----VYNFSKWLKET--------QPDIVICIDVISCLYANKA 102 (359)
T ss_pred -----hcchhcccccchhh----hhc--------ccHH----HHHHHHHHHhc--------CCCEEEEcCHHHHHHHHHH
Confidence 00000 00000000 000 0000 11122333322 7999999986655544444
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
.+..+ ...+++.+.|..... ... .....+..+|.+++
T Consensus 103 ~~~~~-----~~~~~~~~~h~~~~~---------------~~~-----------------------~~~~~~~~~d~~i~ 139 (359)
T PRK09922 103 RKKSG-----KQFKIFSWPHFSLDH---------------KKH-----------------------AECKKITCADYHLA 139 (359)
T ss_pred HHHhC-----CCCeEEEEecCcccc---------------cch-----------------------hhhhhhhcCCEEEE
Confidence 43321 234567677743100 000 00011367999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+.+.+.+.. ...+..++.+||||+|.+.+..... ...+.
T Consensus 140 ~S~~~~~~~~~----------~~~~~~ki~vi~N~id~~~~~~~~~-----------------------------~~~~~ 180 (359)
T PRK09922 140 ISSGIKEQMMA----------RGISAQRISVIYNPVEIKTIIIPPP-----------------------------ERDKP 180 (359)
T ss_pred cCHHHHHHHHH----------cCCCHHHEEEEcCCCCHHHccCCCc-----------------------------ccCCC
Confidence 99998877631 1334568999999999654432111 01246
Q ss_pred CEEEEecccc--cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCC---hhHHHHHHhc
Q 008154 383 PLIGFIGRLD--YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFN---VPISHRITAG 456 (576)
Q Consensus 383 ~~i~~~Gr~~--~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~ll~~ 456 (576)
++++++||+. +.||++.+++|+..+.. +++|+|+|+|+ ..+...+.+.+. +..++ .+.|+. .+....+|+.
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~-~~~l~ivG~g~-~~~~l~~~~~~~~l~~~v-~f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTG-EWQLHIIGDGS-DFEKCKAYSRELGIEQRI-IWHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCC-CeEEEEEeCCc-cHHHHHHHHHHcCCCCeE-EEecccCCcHHHHHHHHhc
Confidence 8899999996 46999999999998844 79999999995 344444444432 23344 345542 2456678899
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeC-ccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhh
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~ 535 (576)
+|++|+||.+|+||++++||||||+|||+++ .||..|++.+ +.+|++++++|+++++++|.+++.
T Consensus 258 ~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~----------~~~G~lv~~~d~~~la~~i~~l~~---- 323 (359)
T PRK09922 258 VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP----------GLNGELYTPGNIDEFVGKLNKVIS---- 323 (359)
T ss_pred CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccC----------CCceEEECCCCHHHHHHHHHHHHh----
Confidence 9999999999999999999999999999999 8999999988 899999999999999999999986
Q ss_pred CHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 536 HKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 536 ~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
|++.+..........+|+-+.+.+++.++|+.+..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 324 GEVKYQHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 44432222222235689999999999999988764
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-31 Score=275.24 Aligned_cols=354 Identities=17% Similarity=0.197 Sum_probs=241.3
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++... ..||.++++..++++|.+.||+|++++..-..... ...
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~---~~~-------------------------- 47 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVK---PPI-------------------------- 47 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCcc---chh--------------------------
Confidence 478887542 36999999999999999999999999864211100 000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
.......+. .... ...+......+.+.++.. +|||||+|..++.+...+++...
T Consensus 48 -~~~~~~~~~---~~~~--------------~~~~~~~~~~~~~~~~~~--------~pdiv~~~~~~~~~~~~l~~~~~ 101 (360)
T cd04951 48 -DATIILNLN---MSKN--------------PLSFLLALWKLRKILRQF--------KPDVVHAHMFHANIFARLLRLFL 101 (360)
T ss_pred -hccceEEec---cccc--------------chhhHHHHHHHHHHHHhc--------CCCEEEEcccchHHHHHHHHhhC
Confidence 000011111 0000 001111111222332222 79999999887766655555432
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.+++++.|.|+....+ ... ..+.+.+...++.++++|+.
T Consensus 102 ------~~~~~v~~~h~~~~~~--------------~~~---------------------~~~~~~~~~~~~~~~~~s~~ 140 (360)
T cd04951 102 ------PSPPLICTAHSKNEGG--------------RLR---------------------MLAYRLTDFLSDLTTNVSKE 140 (360)
T ss_pred ------CCCcEEEEeeccCchh--------------HHH---------------------HHHHHHHhhccCceEEEcHH
Confidence 5689999999752110 000 01223334567888888887
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.. ....+..++.+||||+|...+.+.... ...+++.++++ ++.++++
T Consensus 141 ~~~~~~~---------~~~~~~~~~~~i~ng~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~~l 192 (360)
T cd04951 141 ALDYFIA---------SKAFNANKSFVVYNGIDTDRFRKDPAR-----------------RLKIRNALGVK--NDTFVIL 192 (360)
T ss_pred HHHHHHh---------ccCCCcccEEEEccccchhhcCcchHH-----------------HHHHHHHcCcC--CCCEEEE
Confidence 6665431 112345689999999998777654322 34566777776 5678999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
++||+.+.||++.+++++.++.+ ++++|+|+|+|+. .+...+.+.+. ...++. +.++..+ +..+++.||++++|
T Consensus 193 ~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~~v~-~~g~~~~-~~~~~~~ad~~v~~ 269 (360)
T cd04951 193 AVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL-RATLERLIKALGLSNRVK-LLGLRDD-IAAYYNAADLFVLS 269 (360)
T ss_pred EEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc-HHHHHHHHHhcCCCCcEE-Eeccccc-HHHHHHhhceEEec
Confidence 99999999999999999999876 4899999999862 34444444332 223444 4454433 45799999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++|||++|+|+|+++.|+..|.+.+ +|+.++++|+++++++|.+++. .++.....+
T Consensus 270 s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~------------~g~~~~~~~~~~~~~~i~~ll~---~~~~~~~~~ 334 (360)
T cd04951 270 SAWEGFGLVVAEAMACELPVVATDAGGVREVVGD------------SGLIVPISDPEALANKIDEILK---MSGEERDII 334 (360)
T ss_pred ccccCCChHHHHHHHcCCCEEEecCCChhhEecC------------CceEeCCCCHHHHHHHHHHHHh---CCHHHHHHH
Confidence 9999999999999999999999999999999864 7889999999999999999985 244444444
Q ss_pred HHH--HHhhhCCHHHHHHHHHHHHH
Q 008154 544 MRR--GMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 544 ~~~--a~~~~fs~~~~~~~y~~~y~ 566 (576)
.++ .+.++|||+.++++|.++|.
T Consensus 335 ~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 335 GARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 433 35689999999999999996
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=277.37 Aligned_cols=342 Identities=17% Similarity=0.118 Sum_probs=230.4
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+ + .||.++++.+++++|.+.||+|+++++...... .... ..
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~-----~~~~----------------------~~ 49 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGD-----YDDE----------------------IE 49 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCcc-----hHHH----------------------HH
Confidence 589998764 3 699999999999999999999999997643210 0000 00
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..+++++.++... .....+ .....+.++.. +|||||+|.........++....
T Consensus 50 ~~~~~~~~~~~~~----------------~~~~~~---~~~~~~~~~~~--------~~Dvv~~~~~~~~~~~~~~~~~~ 102 (358)
T cd03812 50 KLGGKIYYIPARK----------------KNPLKY---FKKLYKLIKKN--------KYDIVHVHGSSASGFILLAAKKA 102 (358)
T ss_pred HcCCeEEEecCCC----------------ccHHHH---HHHHHHHHhcC--------CCCEEEEeCcchhHHHHHHHhhC
Confidence 1244554432111 001111 11122222222 79999999876555555544432
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
....++++.|+.......... ... ...+.+..++.++.++++|+.
T Consensus 103 ------~~~~~v~~~~~~~~~~~~~~~---------~~~--------------------~~~~~~~~~~~~~~~i~~s~~ 147 (358)
T cd03812 103 ------GVKVRIAHSHNTSDSHDKKKK---------ILK--------------------YKVLRKLINRLATDYLACSEE 147 (358)
T ss_pred ------CCCeEEEEeccccccccccch---------hhH--------------------HHHHHHHHHhcCCEEEEcCHH
Confidence 223457788865322111000 000 012456677889999999998
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.. . ....++.+||||+|.+.+.+.... +.. ++..+.. ++.++|+
T Consensus 148 ~~~~~~~---------~--~~~~~~~vi~ngvd~~~~~~~~~~-----------------~~~-~~~~~~~--~~~~~i~ 196 (358)
T cd03812 148 AGKWLFG---------K--VKNKKFKVIPNGIDLEKFIFNEEI-----------------RKK-RRELGIL--EDKFVIG 196 (358)
T ss_pred HHHHHHh---------C--CCcccEEEEeccCcHHHcCCCchh-----------------hhH-HHHcCCC--CCCEEEE
Confidence 7766531 1 345789999999998877654321 111 3444444 5778999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
|+||+.+.||++.+++|+..|.+ ++++++|+|+|+. .+...+.+.+. ...++ .+.++. +.+..+++.||++|+|
T Consensus 197 ~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~-~~~~~~~~~~~~~~~~v-~~~g~~-~~~~~~~~~adi~v~p 273 (358)
T cd03812 197 HVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGEL-EEEIKKKVKELGLEDKV-IFLGVR-NDVPELLQAMDVFLFP 273 (358)
T ss_pred EEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCch-HHHHHHHHHhcCCCCcE-EEeccc-CCHHHHHHhcCEEEec
Confidence 99999999999999999999976 5899999999863 33333333332 23344 455553 3456899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++||||+|+|||+|+.|+..|.+.+ ..|++..++++++++++|.+++. |++..+++
T Consensus 274 s~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-----------~~~~~~~~~~~~~~a~~i~~l~~----~~~~~~~~ 338 (358)
T cd03812 274 SLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-----------LVKFLSLDESPEIWAEEILKLKS----EDRRERSS 338 (358)
T ss_pred ccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-----------CccEEeCCCCHHHHHHHHHHHHh----Ccchhhhh
Confidence 9999999999999999999999999999999876 45666667788999999999986 77777777
Q ss_pred HHHHHhh
Q 008154 544 MRRGMEK 550 (576)
Q Consensus 544 ~~~a~~~ 550 (576)
...+..+
T Consensus 339 ~~~~~~~ 345 (358)
T cd03812 339 ESIKKKG 345 (358)
T ss_pred hhhhhcc
Confidence 6665443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=281.69 Aligned_cols=233 Identities=14% Similarity=0.079 Sum_probs=175.0
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
++..+.+.||.++++|+++++.+.+ .+.. ..++.+++||+|.+.+......
T Consensus 213 l~~~~~~~ad~ii~nS~~t~~~l~~---------~~~~-~~~i~vvyp~vd~~~~~~~~~~------------------- 263 (463)
T PLN02949 213 MYGLVGRCAHLAMVNSSWTKSHIEA---------LWRI-PERIKRVYPPCDTSGLQALPLE------------------- 263 (463)
T ss_pred HHHHHcCCCCEEEECCHHHHHHHHH---------HcCC-CCCeEEEcCCCCHHHcccCCcc-------------------
Confidence 3455668999999999999887642 2222 3478899999997655221110
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCCh-hh----HHHHHHHHH-Hhc
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDP-QF----ESWMRDTEA-TYK 436 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~~-~~----~~~~~~~~~-~~~ 436 (576)
..++..+++++||+.++||++++|+|+.++.+ ++++|+|+|++.. .. ++..+.+++ .+.
T Consensus 264 ---------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~ 334 (463)
T PLN02949 264 ---------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLD 334 (463)
T ss_pred ---------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCC
Confidence 01245789999999999999999999998753 4799999999731 11 223333332 234
Q ss_pred CceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccc-cccccccccccCCCCCcceeEeC
Q 008154 437 DKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR-DTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 437 ~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~-e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
.++.+....+.+....+|+.||++++||.+|+||++++||||+|+|||+++.||.. |++.+ ..++.+|++++
T Consensus 335 ~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~-------~~~g~tG~l~~ 407 (463)
T PLN02949 335 GDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLD-------EDGQQTGFLAT 407 (463)
T ss_pred CcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeec-------CCCCcccccCC
Confidence 56666555566777789999999999999999999999999999999999999875 66654 11256899874
Q ss_pred CCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 516 PLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 516 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
|+++++++|.+++. ++++.+.+|++++ ..++|||+++++++.+.++.+++.
T Consensus 408 --~~~~la~ai~~ll~---~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 408 --TVEEYADAILEVLR---MRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred --CHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence 89999999999986 2566677777776 346899999999999999988764
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-33 Score=296.33 Aligned_cols=421 Identities=15% Similarity=0.088 Sum_probs=278.9
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecC-----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFG----- 135 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~----- 135 (576)
..+||+|+++.++.++++++|.+.+.+|..|..|.+.|.. .+.++. ...+.|.+.|
T Consensus 121 LGnGGLGrLAac~ldS~A~LglP~~G~Gi~Y~yG~F~Q~I-~dG~Q~E~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~~ 199 (815)
T PRK14986 121 LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI-VNGRQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQE 199 (815)
T ss_pred CCCcchHHHHHHHHHHHHhCCCCeEEEEecccCCCeEEEE-ECCEEEEcCCCccCCCCceeEecCCcEEEEEeCCEEEec
Confidence 4589999999999999999999999999999999765444 222221 1112222222
Q ss_pred ---------------------------CeeEEEEEEeeec-----------CeEEEEecCCC-CCCCCCCCCCCCCCCCc
Q 008154 136 ---------------------------GEQEIAFFHEYRE-----------GVDWVFVDHPS-YHRPGNPYGDINGAFGD 176 (576)
Q Consensus 136 ---------------------------~~~~~~~~~~~~~-----------gv~v~~l~~~~-~~~~~~~y~~~~~~~~~ 176 (576)
....+|+|...++ ++..+..+... -.-+..+|+.. ..|.+
T Consensus 200 g~~~~w~~~~~v~avpyD~pipgy~t~~vn~lRLW~a~~~~~fd~~~fn~g~y~~a~~~~n~~e~Is~~LYp~D-~~y~G 278 (815)
T PRK14986 200 GKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDD-STYSG 278 (815)
T ss_pred CceeEeeCCeeEEEEeCCccccCCCCCceEEEEEEEeecCcccCHhhcccccHHHHhhccchhhccccccCCCC-CCccc
Confidence 2233344444432 11111112110 01123345431 22335
Q ss_pred hHHHH---HHHHHHHHhhc-ccC-----CCCCCCCCCccEEEeCCCccchHHHHHHhhcc-----CCCCC---CCCcEEE
Q 008154 177 NQFRY---TLLCYAACEAP-LVL-----PLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR-----PHGVY---KDARSIL 239 (576)
Q Consensus 177 ~~~r~---~~~~~~~~~~~-~~~-----~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~-----~~~~~---~~~~~v~ 239 (576)
.+.|+ .+++.++++.+ +.. .+..+. ++.+||+||.|++++...+-+... .+..+ .+..++|
T Consensus 279 k~lRLkQEyfl~~agv~di~r~~~~~~~~l~~l~--~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~f 356 (815)
T PRK14986 279 RELRLRQEYFLVSATVQDILSRHYQLHKTYDNLA--DKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSY 356 (815)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhCCCHhhCC--cccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEe
Confidence 68888 67787777744 100 011111 567999999999987443332111 11111 1237899
Q ss_pred EeecCCCCC--CCChhhhhhcC-CCh--------hhhccccccc----ccccccccCCc--CccchhHHHHHHhccceec
Q 008154 240 VIHNLSHQG--VEPAATYKNLG-LPS--------EWYGALEWVF----PTWARTHALDT--GEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 240 t~H~~~~~~--~~~~~~~~~~~-~~~--------~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~a~~~ad~v~~ 302 (576)
|+||+.+.+ .||.+++..+- -.. +++......+ ..++++--... ...++|..+|+..|..+++
T Consensus 357 TnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~fl~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNG 436 (815)
T PRK14986 357 TNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNG 436 (815)
T ss_pred ecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHHHHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhH
Confidence 999997666 78888885442 111 1111100000 01122111111 2369999999999999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCC---CCCccccccCCcCCcccchHhHH-----------
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNP---SSDEHIASHYSIDDLSGKVQCKI----------- 368 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~----------- 368 (576)
||+.+.+.+++.++ ......-+.++.-++|||+...|.. +...++++++.+++|..+.....
T Consensus 437 VS~lH~evl~~~~f----~df~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f 512 (815)
T PRK14986 437 VSELHSNLMVQSLF----ADFAKIFPGRFCNVTNGVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMV 512 (815)
T ss_pred HHHHHHHHHHHHHH----HHHHhhCCCcccccCCCCChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHH
Confidence 99998876544332 2223345666778999999999984 66778888888888864432222
Q ss_pred -----------------HHHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc---------CCcEEEEEeCCC
Q 008154 369 -----------------ALQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGD 421 (576)
Q Consensus 369 -----------------~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~---------~~~~lii~G~g~ 421 (576)
.+++..|+..+++.++++++.||..||+..+ ++..+.++.+ .|+++||+|+++
T Consensus 513 ~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAa 592 (815)
T PRK14986 513 NHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAA 592 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCC
Confidence 3333557666799999999999999999999 8887666533 278999999998
Q ss_pred hhhHHHHHHHHH------------HhcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEE
Q 008154 422 PQFESWMRDTEA------------TYKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVV 485 (576)
Q Consensus 422 ~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIa 485 (576)
|.+...++.++. ..++ +++++++|+..++..++++|||+.+.|+ .|++|++.|++|.+|.++++
T Consensus 593 P~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlg 672 (815)
T PRK14986 593 SAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIG 672 (815)
T ss_pred CCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeee
Confidence 877666655543 2223 7999999999999999999999999998 79999999999999999999
Q ss_pred eCccccccccccccccccCCCCCcceeEeC
Q 008154 486 HATGGLRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 486 t~~gg~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
|.+|||.|+..+. +++|||.|.
T Consensus 673 tlDG~nvEi~e~v--------G~eN~~~fG 694 (815)
T PRK14986 673 TLDGANVEMLEHV--------GEENIFIFG 694 (815)
T ss_pred ccCCchhHHHHhc--------CCCcEEEeC
Confidence 9999999999742 247899884
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=278.42 Aligned_cols=273 Identities=18% Similarity=0.180 Sum_probs=203.3
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCc
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
+|||||+|....+.....+.++ .++|+|+|.|+........ .......
T Consensus 82 ~~dvvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~------~~~~~~~------------------- 129 (367)
T cd05844 82 RPDLVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLA------LLLRSRW------------------- 129 (367)
T ss_pred CCCEEEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccch------hhcccch-------------------
Confidence 7999999976555544444432 5799999999642111000 0000000
Q ss_pred CccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccc
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 363 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~ 363 (576)
.....+++..++.+|.++++|+..++.+.. .+.+..++.+++||+|.+.+.+....
T Consensus 130 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----------~~~~~~~i~vi~~g~d~~~~~~~~~~-------------- 185 (367)
T cd05844 130 ALYARRRRRLARRAALFIAVSQFIRDRLLA----------LGFPPEKVHVHPIGVDTAKFTPATPA-------------- 185 (367)
T ss_pred hHHHHHHHHHHHhcCEEEECCHHHHHHHHH----------cCCCHHHeEEecCCCCHHhcCCCCCC--------------
Confidence 001235566778999999999988877642 13345679999999998776543211
Q ss_pred hHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceE
Q 008154 364 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYR 440 (576)
Q Consensus 364 ~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~ 440 (576)
.+..+++++|++.+.||++.+++|+..+.+ ++++|+|+|+++ ..++..+.+.+. ...++.
T Consensus 186 ----------------~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~-~~~~~~~~~~~~~~~~~v~ 248 (367)
T cd05844 186 ----------------RRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP-LLAALEALARALGLGGRVT 248 (367)
T ss_pred ----------------CCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch-HHHHHHHHHHHcCCCCeEE
Confidence 356789999999999999999999999875 589999999985 233333333331 344554
Q ss_pred EEccCChhHHHHHHhcCCEEEeCCC------CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe
Q 008154 441 GWVGFNVPISHRITAGCDILLMPSR------FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 514 (576)
Q Consensus 441 ~~~~~~~~~~~~ll~~~Dv~v~ps~------~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~ 514 (576)
+....+.+.+..+++.+|++++||. .|++|++++|||+||+|||+++.++..|.+.+ +.+|+++
T Consensus 249 ~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~----------~~~g~~~ 318 (367)
T cd05844 249 FLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVED----------GETGLLV 318 (367)
T ss_pred ECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheec----------CCeeEEE
Confidence 4333455667789999999999997 49999999999999999999999999999988 8899999
Q ss_pred CCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHH
Q 008154 515 LPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 515 ~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~ 563 (576)
+++|+++++++|.+++. |++.+.++++++ +.++|||+.+++++.+
T Consensus 319 ~~~d~~~l~~~i~~l~~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 319 PEGDVAALAAALGRLLA----DPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 99999999999999875 788888888776 4578999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-31 Score=270.10 Aligned_cols=360 Identities=21% Similarity=0.218 Sum_probs=244.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..++|. .||.+..+..++++|++.||+|.++++....... ...
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~---~~~-------------------------- 49 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESE---GPA-------------------------- 49 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhcc---CCC--------------------------
Confidence 699999998883 5999999999999999999999999876422100 000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccc-hHHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG-LVPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~-~~~~~l~~~ 225 (576)
..+.+.....+.+... ...- ... ....+.++. .+||+||+|..... +....+..
T Consensus 50 -~~~~~~~~~~~~~~~~-~~~~-------~~~-------~~~~~~~~~--------~~pdii~~~~~~~~~~~~~~~~~- 104 (364)
T cd03814 50 -RVVPVPSVPLPGYPEI-RLAL-------PPR-------RRVRRLLDA--------FAPDVVHIATPGPLGLAALRAAR- 104 (364)
T ss_pred -CceeecccccCcccce-Eecc-------cch-------hhHHHHHHh--------cCCCEEEEeccchhhHHHHHHHH-
Confidence 0011111110000000 0000 000 011111111 17999999864332 22223222
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
. .++|++.+.|+.. +.............. ...+.+..++.+|.++++|+
T Consensus 105 ~------~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~d~i~~~s~ 153 (364)
T cd03814 105 R------LGIPVVTSYHTDF-----PEYLRYYGLGPLSWL--------------------AWAYLRWFHNRADRVLVPSP 153 (364)
T ss_pred H------cCCCEEEEEecCh-----HHHhhhcccchHhHh--------------------hHHHHHHHHHhCCEEEeCCH
Confidence 2 5789999999752 111000000000000 01355667789999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+... .....++.+++||+|...+.+.... ...++..+ + .+.+++
T Consensus 154 ~~~~~~~------------~~~~~~~~~~~~g~~~~~~~~~~~~------------------~~~~~~~~-~--~~~~~i 200 (364)
T cd03814 154 SLADELR------------ARGFRRVRLWPRGVDTELFHPRRRD------------------EALRARLG-P--PDRPVL 200 (364)
T ss_pred HHHHHHh------------ccCCCceeecCCCccccccCccccc------------------HHHHHHhC-C--CCCeEE
Confidence 8776432 2234578999999998877654321 22233333 2 356899
Q ss_pred EEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
+|+||+.+.||++.+++++..+.+ ++++++|+|.++. ....+ ....++.+....+.+.+..+++.||++++||
T Consensus 201 ~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s 274 (364)
T cd03814 201 LYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--RARLE----ARYPNVHFLGFLDGEELAAAYASADVFVFPS 274 (364)
T ss_pred EEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--HHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEECc
Confidence 999999999999999999999976 4899999999852 22222 2233444333335566778999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 008154 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 544 (576)
Q Consensus 465 ~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 544 (576)
..|++|++++|||+||+|||+++.++..|.+.+ +.+|+++++.|.++++++|.+++. |++.+.+++
T Consensus 275 ~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~----------~~~g~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~ 340 (364)
T cd03814 275 RTETFGLVVLEAMASGLPVVAPDAGGPADIVTD----------GENGLLVEPGDAEAFAAALAALLA----DPELRRRMA 340 (364)
T ss_pred ccccCCcHHHHHHHcCCCEEEcCCCCchhhhcC----------CcceEEcCCCCHHHHHHHHHHHHc----CHHHHHHHH
Confidence 999999999999999999999999999999987 789999999999999999998875 888888888
Q ss_pred HHHH--hhhCCHHHHHHHHHHHHH
Q 008154 545 RRGM--EKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 545 ~~a~--~~~fs~~~~~~~y~~~y~ 566 (576)
+++. .++|+|+++++++.++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 341 ARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhhC
Confidence 8873 368999999999999873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-31 Score=269.72 Aligned_cols=358 Identities=18% Similarity=0.167 Sum_probs=250.3
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+. .||.++++..++++|.+.|++|.+++...... +...+ .
T Consensus 1 ~i~~i~~~~~----~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~------~~~~~----------------------~ 48 (365)
T cd03807 1 KVLHVITGLD----VGGAERMLVRLLKGLDRDRFEHVVISLTDRGE------LGEEL----------------------E 48 (365)
T ss_pred CeEEEEeecc----CccHHHHHHHHHHHhhhccceEEEEecCcchh------hhHHH----------------------H
Confidence 5889987653 39999999999999999999999998642211 00000 0
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..+++++.+..+... .... ......+.++.. +||+||+|..+..+.........
T Consensus 49 ~~~i~v~~~~~~~~~--------------~~~~----~~~~~~~~~~~~--------~~div~~~~~~~~~~~~~~~~~~ 102 (365)
T cd03807 49 EAGVPVYCLGKRPGR--------------PDPG----ALLRLYKLIRRL--------RPDVVHTWMYHADLYGGLAARLA 102 (365)
T ss_pred hcCCeEEEEeccccc--------------ccHH----HHHHHHHHHHhh--------CCCEEEeccccccHHHHHHHHhc
Confidence 135666555422210 0011 111122222222 79999999877666555544432
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.+++++++.|....... +..... ...+.+...+.+|.++++|+.
T Consensus 103 ------~~~~~i~~~~~~~~~~~---------~~~~~~---------------------~~~~~~~~~~~~~~~i~~s~~ 146 (365)
T cd03807 103 ------GVPPVIWGIRHSDLDLG---------KKSTRL---------------------VARLRRLLSSFIPLIVANSAA 146 (365)
T ss_pred ------CCCcEEEEecCCccccc---------chhHhH---------------------HHHHHHHhccccCeEEeccHH
Confidence 36899999997532110 000000 012344555778999999998
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.. ......++.+++||+|...+.+.... ....++.++++ ++.++++
T Consensus 147 ~~~~~~~----------~~~~~~~~~vi~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~i~ 197 (365)
T cd03807 147 AAEYHQA----------IGYPPKKIVVIPNGVDTERFSPDLDA-----------------RARLREELGLP--EDTFLIG 197 (365)
T ss_pred HHHHHHH----------cCCChhheeEeCCCcCHHhcCCcccc-----------------hHHHHHhcCCC--CCCeEEE
Confidence 7766531 13345688999999998777654432 34455677876 5678999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHH-H-HhcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTE-A-TYKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
++||+.+.||++.+++|+..+.+ ++++++++|.++.. ....+... . ....++. +.+...+ +..+++.||++++
T Consensus 198 ~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~-~~~~~~~~~~~~~~~~v~-~~g~~~~-~~~~~~~adi~v~ 274 (365)
T cd03807 198 IVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDR-ANLELLALKELGLEDKVI-LLGERSD-VPALLNALDVFVL 274 (365)
T ss_pred EecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcch-hHHHHHHHHhcCCCceEE-Ecccccc-HHHHHHhCCEEEe
Confidence 99999999999999999999876 58999999998532 22222222 1 2223343 4444333 5589999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
||.+|++|++++|||+||+|||+++.|+..|.+.+ +|++++++|+++++++|.+++. +++.+.+
T Consensus 275 ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~------------~g~~~~~~~~~~l~~~i~~l~~----~~~~~~~ 338 (365)
T cd03807 275 SSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD------------TGFLVPPGDPEALAEAIEALLA----DPALRQA 338 (365)
T ss_pred CCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc------------CCEEeCCCCHHHHHHHHHHHHh----ChHHHHH
Confidence 99999999999999999999999999999998863 8999999999999999999886 6777777
Q ss_pred HHHHH---HhhhCCHHHHHHHHHHHHH
Q 008154 543 LMRRG---MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 543 ~~~~a---~~~~fs~~~~~~~y~~~y~ 566 (576)
+++++ +.++|||++++++|.++|+
T Consensus 339 ~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 339 LGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 77776 4578999999999999884
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=290.93 Aligned_cols=423 Identities=15% Similarity=0.072 Sum_probs=280.1
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccch-------hccccC----------ceeEEEeecCCe----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENF-------TLAKDL----------GCCMKICCFGGE---- 137 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~-------~~~~~~----------~~~~~~~~~~~~---- 137 (576)
..+||+|+++.++.++++++|.+.+.+|..|..|.+.|..- .+.+.. ...+.+.+.|+.
T Consensus 110 LGnGGLGrLAacfldS~AtL~lP~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~~ 189 (798)
T PRK14985 110 LGNGGLGRLAACFLDSMATVGQPATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGGKVTKQD 189 (798)
T ss_pred CCCcchHHHHHHHHHHHHhCCCCeEEEEeccCCCCeEEEEECCeEEECCCCcccCCCCceecCCCceEEEeeCCEEEeeC
Confidence 45899999999999999999999999999999996554433 112211 233444333322
Q ss_pred ----------------------------eEEEEEEeeecCeEEEEec-----------CCCCCC--CCCCCCCCCCCCCc
Q 008154 138 ----------------------------QEIAFFHEYREGVDWVFVD-----------HPSYHR--PGNPYGDINGAFGD 176 (576)
Q Consensus 138 ----------------------------~~~~~~~~~~~gv~v~~l~-----------~~~~~~--~~~~y~~~~~~~~~ 176 (576)
..+|+|....+. .+.+.+ +....+ +..+|++-. .+..
T Consensus 190 G~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~~~~-~~~l~~fn~gdy~~a~en~~~~e~It~~LYp~D~-~~~G 267 (798)
T PRK14985 190 GRERWEPAFTITGEAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFNDGDFLRAEQQGIDAEKLTKVLYPNDN-HTAG 267 (798)
T ss_pred CcEEEECCEEEEEEeccccccCCCCCceEEEEEeEcCCCC-ccCHHHcCCcchhhccccchhhcchhceecCCCC-Ccch
Confidence 233333333222 222211 111122 456787511 1112
Q ss_pred hHHHH---HHHHHHHHh-hcccCCC--CCCCC-CCccEEEeCCCccchHHH-HHHhhc----cCCCCCC---CCcEEEEe
Q 008154 177 NQFRY---TLLCYAACE-APLVLPL--GGFTY-GEKCIFLVNDWHAGLVPV-LLASKY----RPHGVYK---DARSILVI 241 (576)
Q Consensus 177 ~~~r~---~~~~~~~~~-~~~~~~~--~~~~~-~~pDVvH~~~~~~~~~~~-~l~~~~----~~~~~~~---~~~~v~t~ 241 (576)
.+.|+ .+++.+.++ +++.... ..+.. .+|.+||+||.|++++.. +++... ..+..+. ...++||+
T Consensus 268 k~lRLkQEyfl~sa~vqdilr~~~~~~~~l~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTn 347 (798)
T PRK14985 268 KKLRLMQQYFQCACSVADILRRHHLAGRKLHELPDYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTN 347 (798)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhCCCCcEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeec
Confidence 47777 456666555 4322110 11211 178999999999998744 333211 1111111 23789999
Q ss_pred ecCCCCC--CCChhhhhhc-CCChhhhcccccccccccccc-cCCc----------CccchhHHHHHHhccceeccCccc
Q 008154 242 HNLSHQG--VEPAATYKNL-GLPSEWYGALEWVFPTWARTH-ALDT----------GEAVNVLKGAIVTADRLLTVSKGY 307 (576)
Q Consensus 242 H~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~~a~~~ad~v~~vS~~~ 307 (576)
||+.+.+ .||.++++.+ +-....+...-..+....+.. +.+. .+.++|..+|+..|..|++||+.+
T Consensus 348 HT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH 427 (798)
T PRK14985 348 HTLMPEALECWDEKLVKSLLPRHMQIIKEINTRFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALH 427 (798)
T ss_pred CCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHH
Confidence 9997666 7888888544 211111111111111111111 1111 346999999999999999999999
Q ss_pred hhhhccccCCcchhhhhhccCCceeEecCCCCCCCCC---CCCCccccccCCcCCcccchH-------------------
Q 008154 308 SWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWN---PSSDEHIASHYSIDDLSGKVQ------------------- 365 (576)
Q Consensus 308 ~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~---~~~~~~l~~~~~~~~~~~~~~------------------- 365 (576)
.+.+++.++ ......-+.++..++|||+...|. .+....+++.+.+++|..+..
T Consensus 428 ~eil~~~~f----~df~~l~p~kf~nvTNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~ 503 (798)
T PRK14985 428 SDLVVKDLF----PEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYR 503 (798)
T ss_pred hchhHHhhh----hhhHhhCCCccCCcCCCcCcchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHH
Confidence 877665443 223344567788999999999998 666778888888877752221
Q ss_pred ---------hHHHHHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc---------CCcEEEEEeCCChhhHH
Q 008154 366 ---------CKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQFES 426 (576)
Q Consensus 366 ---------~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~---------~~~~lii~G~g~~~~~~ 426 (576)
....+++..|+..+++.+.++++.||..||+..+ ++..+.++.+ .|.++||+|+++|.+..
T Consensus 504 ~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~ 583 (798)
T PRK14985 504 EIKQANKVRLAEFVKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL 583 (798)
T ss_pred HHHHHHHHHHHHHHHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH
Confidence 1123344557777799999999999999999999 8887766543 26899999999888776
Q ss_pred HHHHHHH------H------hc--CceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeCccc
Q 008154 427 WMRDTEA------T------YK--DKYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 427 ~~~~~~~------~------~~--~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
.++.++. . .. .+++++++|+..++..++++|||+.+.|+ .|++|++.|++|.+|.++++|.+||
T Consensus 584 aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGa 663 (798)
T PRK14985 584 AKNIIFAINKVAEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGA 663 (798)
T ss_pred HHHHHHHHHHHHHHhcCChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccch
Confidence 6665543 1 12 27999999999999999999999999998 7999999999999999999999999
Q ss_pred cccccccccccccCCCCCcceeEeC
Q 008154 491 LRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 491 ~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
+.|+.... +++|||+|.
T Consensus 664 nvEi~e~v--------G~eN~f~fG 680 (798)
T PRK14985 664 NVEIAEQV--------GEENIFIFG 680 (798)
T ss_pred HHHHHHHh--------CcCcEEEeC
Confidence 99999742 247888883
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-30 Score=269.85 Aligned_cols=350 Identities=20% Similarity=0.213 Sum_probs=237.5
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..++|. .||.++++.+++++|+++||+|++++........ . ..
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~--~---------------------------~~ 49 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGR--D---------------------------EE 49 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcch--h---------------------------hh
Confidence 699999998884 7999999999999999999999999865322110 0 00
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..+.+++.++..... ....+ ...+ +.. .. . . ..+||+||+|..............
T Consensus 50 ~~~~~~~~~~~~~~~-~~~~~----------~~~~--~~~--~~-~--~------~~~~Dii~~~~~~~~~~~~~~~~~- 104 (357)
T cd03795 50 RNGHRVIRAPSLLNV-ASTPF----------SPSF--FKQ--LK-K--L------AKKADVIHLHFPNPLADLALLLLP- 104 (357)
T ss_pred ccCceEEEeeccccc-ccccc----------cHHH--HHH--HH-h--c------CCCCCEEEEecCcchHHHHHHHhc-
Confidence 122333333211100 00000 0000 000 00 0 1 117999999875443222222111
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.++|.+++.|+...... ..... ...+++..++.||.++++|+.
T Consensus 105 ------~~~~~i~~~h~~~~~~~----------~~~~~---------------------~~~~~~~~~~~~d~vi~~s~~ 147 (357)
T cd03795 105 ------RKKPVVVHWHSDIVKQK----------LLLKL---------------------YRPLQRRFLRRADAIVATSPN 147 (357)
T ss_pred ------cCceEEEEEcChhhccc----------hhhhh---------------------hhHHHHHHHHhcCEEEeCcHH
Confidence 36789999996421110 00000 013566788999999999998
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.. . .....++.+||||++...+.+.... .. .....+ .+.+.|+
T Consensus 148 ~~~~~~~---------~-~~~~~~~~~i~~gi~~~~~~~~~~~-----------------~~---~~~~~~--~~~~~i~ 195 (357)
T cd03795 148 YAETSPV---------L-RRFRDKVRVIPLGLDPARYPRPDAL-----------------EE---AIWRRA--AGRPFFL 195 (357)
T ss_pred HHHHHHH---------h-cCCccceEEecCCCChhhcCCcchh-----------------hh---HhhcCC--CCCcEEE
Confidence 8765431 1 1223678999999998877654321 00 112222 4678999
Q ss_pred EecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEEccC-ChhHHHHHHhcCCEEEeCC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGWVGF-NVPISHRITAGCDILLMPS 464 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps 464 (576)
++||+.+.||++.+++|+.++. +++++|+|+|+. .....+.+.+ ....++.+ .++ +.+.+..+++.||++++||
T Consensus 196 ~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~~-~~~~~~~~~~~~~~~~V~~-~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 196 FVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGPL-EAELEALAAALGLLDRVRF-LGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred EecccccccCHHHHHHHHHhcc--CcEEEEEeCChh-HHHHHHHHHhcCCcceEEE-cCCCCHHHHHHHHHhCCEEEeCC
Confidence 9999999999999999999986 799999999852 3333333322 22334544 444 5566778999999999999
Q ss_pred C--CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 465 R--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 465 ~--~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
. .|++|++++|||++|+|||+++.++..+.+.+ .+.+|++++++|+++++++|.+++. |++.+.+
T Consensus 272 ~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---------~~~~g~~~~~~d~~~~~~~i~~l~~----~~~~~~~ 338 (357)
T cd03795 272 VERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---------HGVTGLVVPPGDPAALAEAIRRLLE----DPELRER 338 (357)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCCchhHHhh---------CCCceEEeCCCCHHHHHHHHHHHHH----CHHHHHH
Confidence 7 59999999999999999999999999988763 1689999999999999999999986 8888888
Q ss_pred HHHHH---HhhhCCHHHHH
Q 008154 543 LMRRG---MEKDYTWENAA 558 (576)
Q Consensus 543 ~~~~a---~~~~fs~~~~~ 558 (576)
+++++ +.++|||+.++
T Consensus 339 ~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 339 LGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHhcchHhhC
Confidence 88877 46799999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-31 Score=281.99 Aligned_cols=290 Identities=21% Similarity=0.241 Sum_probs=206.6
Q ss_pred CccEEEeCCC-ccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhh-hhcCC--Chhhhcccccccccccccc
Q 008154 204 EKCIFLVNDW-HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATY-KNLGL--PSEWYGALEWVFPTWARTH 279 (576)
Q Consensus 204 ~pDVvH~~~~-~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~ 279 (576)
++||+|+|.. .++++..+++.. .++|+|+|.|+.. +.+.. ..... ....+.....
T Consensus 173 ~~dviH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~-----~~e~~~~~~~~~~~~~~~~~~~~--------- 231 (475)
T cd03813 173 KADVYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIY-----TRERKIELLQADWEMSYFRRLWI--------- 231 (475)
T ss_pred CCCEEeccCcchHHHHHHHHHHH-------hCCCEEEecCCcc-----HHHHHHHHHhcccchHHHHHHHH---------
Confidence 7899999964 333444444433 5799999999752 21111 00000 0000000000
Q ss_pred cCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCC
Q 008154 280 ALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD 359 (576)
Q Consensus 280 ~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~ 359 (576)
.-...+++.+++.||.++++|+...+... ..+.+..++.+||||+|.+.|.+....
T Consensus 232 ----~~~~~l~~~~~~~ad~Ii~~s~~~~~~~~----------~~g~~~~ki~vIpNgid~~~f~~~~~~---------- 287 (475)
T cd03813 232 ----RFFESLGRLAYQAADRITTLYEGNRERQI----------EDGADPEKIRVIPNGIDPERFAPARRA---------- 287 (475)
T ss_pred ----HHHHHHHHHHHHhCCEEEecCHHHHHHHH----------HcCCCHHHeEEeCCCcCHHHcCCcccc----------
Confidence 00013567788999999999998765432 224456789999999998877654311
Q ss_pred cccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCC--hhhHHHHHHHHHHh
Q 008154 360 LSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGD--PQFESWMRDTEATY 435 (576)
Q Consensus 360 ~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~--~~~~~~~~~~~~~~ 435 (576)
..+ ++.++|+++||+.+.||++.+++|++.+.+ ++++++|+|+++ +.+.+..+.+.+..
T Consensus 288 ---------------~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l 350 (475)
T cd03813 288 ---------------RPE--KEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESL 350 (475)
T ss_pred ---------------ccC--CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHh
Confidence 011 467899999999999999999999999876 689999999984 22223333333332
Q ss_pred --cCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeE
Q 008154 436 --KDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS 513 (576)
Q Consensus 436 --~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~ 513 (576)
..++. +.|. . ....+++.+|++|+||..|++|++++||||||+|||+|+.|+..|++.+.+.+ .-|.+|++
T Consensus 351 ~l~~~V~-f~G~-~-~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~----~~g~~G~l 423 (475)
T cd03813 351 GLEDNVK-FTGF-Q-NVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDE----ALGPAGEV 423 (475)
T ss_pred CCCCeEE-EcCC-c-cHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCccc----ccCCceEE
Confidence 23444 4552 3 34579999999999999999999999999999999999999999999761100 01458999
Q ss_pred eCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHH
Q 008154 514 FLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 514 ~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~ 566 (576)
++++|+++++++|.+++. |++.+.++++++ +.+.|+|++++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll~----~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLLK----DPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999875 888888888877 4578999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-31 Score=270.97 Aligned_cols=366 Identities=21% Similarity=0.250 Sum_probs=239.2
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+.| ..||.++++..++++|++.||+|+++++....... ....
T Consensus 1 kIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~---~~~~------------------------- 50 (375)
T cd03821 1 KILHVIPSFDP--KYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPL---LVAL------------------------- 50 (375)
T ss_pred CeEEEcCCCCc--ccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccc---hhhc-------------------------
Confidence 69999988766 37999999999999999999999999875322110 0000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccch-HHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL-VPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~-~~~~l~~~ 225 (576)
..++..... ..... ... .... .+........... ..+||+||+|+..... .......+
T Consensus 51 -~~~~~~~~~-~~~~~---~~~---------~~~~-~~~~~~~~~~~~~------~~~~dii~~~~~~~~~~~~~~~~~~ 109 (375)
T cd03821 51 -NGVPVKLFS-INVAY---GLN---------LARY-LFPPSLLAWLRLN------IREADIVHVHGLWSYPSLAAARAAR 109 (375)
T ss_pred -cCceeeecc-cchhh---hhh---------hhhh-ccChhHHHHHHHh------CCCCCEEEEecccchHHHHHHHHHH
Confidence 000000000 00000 000 0000 0000000000001 1179999999733322 22222211
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
. .++|++++.|+.......+ ...+... .......+..++.++.++++|.
T Consensus 110 ~------~~~~~i~~~~~~~~~~~~~----------~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~s~ 158 (375)
T cd03821 110 K------YGIPYVVSPHGMLDPWALP----------HKALKKR---------------LAWFLFERRLLQAAAAVHATSE 158 (375)
T ss_pred H------hCCCEEEEccccccccccc----------cchhhhH---------------HHHHHHHHHHHhcCCEEEECCH
Confidence 1 4689999999753211100 0000000 0011244566778999999986
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
....... ......++.+||||+|.+.+.+.... .. ++..+.+ .+.+++
T Consensus 159 ~~~~~~~-----------~~~~~~~~~vi~~~~~~~~~~~~~~~------------------~~-~~~~~~~--~~~~~i 206 (375)
T cd03821 159 QEAAEIR-----------RLGLKAPIAVIPNGVDIPPFAALPSR------------------GR-RRKFPIL--PDKRII 206 (375)
T ss_pred HHHHHHH-----------hhCCcccEEEcCCCcChhccCcchhh------------------hh-hhhccCC--CCCcEE
Confidence 6554432 12345679999999998877654321 11 4444544 577899
Q ss_pred EEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH--hcCceEEEccC-ChhHHHHHHhcCCEE
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRGWVGF-NVPISHRITAGCDIL 460 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~ll~~~Dv~ 460 (576)
+++||+.+.||++.+++|+..+.+ ++++++++|.+++......+.+.+. ...++. +.++ +.+....+++.||++
T Consensus 207 ~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~-~~g~~~~~~~~~~~~~adv~ 285 (375)
T cd03821 207 LFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVT-FTGMLYGEDKAAALADADLF 285 (375)
T ss_pred EEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEE-EcCCCChHHHHHHHhhCCEE
Confidence 999999999999999999999987 6899999999865555555544222 233444 4444 555677899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSW 540 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~ 540 (576)
++||.+|++|++++|||+||+|+|+++.++..+.+.+ .+|+++++ ++++++++|.+++. +++.+
T Consensus 286 v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~i~~l~~----~~~~~ 349 (375)
T cd03821 286 VLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-----------GCGWVVDD-DVDALAAALRRALE----LPQRL 349 (375)
T ss_pred EeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-----------CceEEeCC-ChHHHHHHHHHHHh----CHHHH
Confidence 9999999999999999999999999999999999875 68888765 56999999998876 77777
Q ss_pred HHHHHHH---HhhhCCHHHHHHHHHH
Q 008154 541 EGLMRRG---MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 541 ~~~~~~a---~~~~fs~~~~~~~y~~ 563 (576)
.++++++ +.++|+|++++++|.+
T Consensus 350 ~~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 350 KAMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 7777766 4789999999999863
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=271.23 Aligned_cols=384 Identities=19% Similarity=0.190 Sum_probs=256.6
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+.|. .||.+.++..++++|++.||+|+++++........ ... . .....
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~--~~~-~-------------------~~~~~ 56 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGK--IYK-G-------------------YKREE 56 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccc--ccc-c-------------------ceEEe
Confidence 699999987773 49999999999999999999999998754322110 000 0 01123
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCc-cchHHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH-AGLVPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~-~~~~~~~l~~~ 225 (576)
.++++++.+......... .+ .....+..+.......... ...+||+||+|.+. ....+.....+
T Consensus 57 ~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~------~~~~~D~v~~~~~~~~~~~~~~~~~~ 121 (394)
T cd03794 57 VDGVRVHRVPLPPYKKNG-LL--------KRLLNYLSFALSALLALLK------RRRRPDVIIATSPPLLIALAALLLAR 121 (394)
T ss_pred cCCeEEEEEecCCCCccc-hH--------HHHHhhhHHHHHHHHHHHh------cccCCCEEEEcCChHHHHHHHHHHHH
Confidence 457777777543322110 10 1111222222222222110 11279999999732 22223333332
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
. .++|+++++|+.. +................ .....+++..++.+|.++++|+
T Consensus 122 ~------~~~~~i~~~h~~~-----~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 122 L------KGAPFVLEVRDLW-----PESAVALGLLKNGSLLY----------------RLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred h------cCCCEEEEehhhc-----chhHHHccCccccchHH----------------HHHHHHHHHHHhcCCEEEEECH
Confidence 2 4789999999862 11111111100000000 0011356778899999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+.+. .......++.++|||++...+.+.... .. +.....+ .+.+++
T Consensus 175 ~~~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~-~~~~~~~--~~~~~i 223 (394)
T cd03794 175 GMREYLV----------RRGVPPEKISVIPNGVDLELFKPPPAD------------------ES-LRKELGL--DDKFVV 223 (394)
T ss_pred HHHHHHH----------hcCCCcCceEEcCCCCCHHHcCCccch------------------hh-hhhccCC--CCcEEE
Confidence 8887653 123456789999999997766554321 01 2222222 467899
Q ss_pred EEecccccccCHHHHHHHHHhhhcC-CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~~-~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
+++|++.+.||++.+++++..+.+. +++++++|+++. .+...+.+......++......+.+....+++.||++++|+
T Consensus 224 ~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~ 302 (394)
T cd03794 224 LYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGPE-KEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPL 302 (394)
T ss_pred EEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCccc-HHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEEec
Confidence 9999999999999999999999774 899999999853 34444433333334555444446667778999999999999
Q ss_pred CCCCC-----cHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHH
Q 008154 465 RFEPC-----GLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSS 539 (576)
Q Consensus 465 ~~E~~-----g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~ 539 (576)
..|++ +++++|||++|+|+|+++.++..+.+.+ +.+|++++++|+++++++|.+++. |++.
T Consensus 303 ~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~~~~ 368 (394)
T cd03794 303 KPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEE----------AGAGLVVPPGDPEALAAAILELLD----DPEE 368 (394)
T ss_pred cCcccccccCchHHHHHHHCCCcEEEecCCCchhhhcc----------CCcceEeCCCCHHHHHHHHHHHHh----ChHH
Confidence 98865 7889999999999999999999999987 789999999999999999999985 7888
Q ss_pred HHHHHHHH---HhhhCCHHHHHHHHH
Q 008154 540 WEGLMRRG---MEKDYTWENAAIQYE 562 (576)
Q Consensus 540 ~~~~~~~a---~~~~fs~~~~~~~y~ 562 (576)
+.++++++ +.++|||+.++++|+
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 88888877 345899999998873
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-30 Score=265.75 Aligned_cols=350 Identities=20% Similarity=0.260 Sum_probs=236.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++.. +| ..||+++++.+++++|++.||+|.+++......... ....
T Consensus 1 kI~~v~~~-~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~---~~~~------------------------ 50 (366)
T cd03822 1 RIALVSPY-PP--RKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLL---YGGE------------------------ 50 (366)
T ss_pred CeEEecCC-CC--CCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCccc---CCCc------------------------
Confidence 69999875 55 279999999999999999999999998653321110 0000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHH---HHH
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV---LLA 223 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~---~l~ 223 (576)
......... +. ...+. ...+.+... +||+||++++.+.+.+. .+.
T Consensus 51 ~~~~~~~~~----~~----------------~~~~~----~~~~~~~~~--------~~dii~~~~~~~~~~~~~~~~~~ 98 (366)
T cd03822 51 QEVVRVIVL----DN----------------PLDYR----RAARAIRLS--------GPDVVVIQHEYGIFGGEAGLYLL 98 (366)
T ss_pred ccceeeeec----CC----------------chhHH----HHHHHHhhc--------CCCEEEEeeccccccchhhHHHH
Confidence 000000000 00 00111 111122111 79999998854432211 111
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
.... ..++|+|+++|+..... .. .....+.+..++.+|.++++
T Consensus 99 ~~~~----~~~~~~i~~~h~~~~~~------------~~---------------------~~~~~~~~~~~~~~d~ii~~ 141 (366)
T cd03822 99 LLLR----GLGIPVVVTLHTVLLHE------------PR---------------------PGDRALLRLLLRRADAVIVM 141 (366)
T ss_pred HHHh----hcCCCEEEEEecCCccc------------cc---------------------hhhhHHHHHHHhcCCEEEEe
Confidence 1100 15789999999851100 00 00012456677899999999
Q ss_pred CccchhhhccccCCcchhhhhhcc-CCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSR-KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~-~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
|....++ .+... ..++.+||||++...+.+... . +....+ .+.
T Consensus 142 s~~~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~~~~--------------------~--~~~~~~--~~~ 185 (366)
T cd03822 142 SSELLRA------------LLLRAYPEKIAVIPHGVPDPPAEPPES--------------------L--KALGGL--DGR 185 (366)
T ss_pred eHHHHHH------------HHhhcCCCcEEEeCCCCcCcccCCchh--------------------h--HhhcCC--CCC
Confidence 7332222 22222 468999999999765543211 0 122222 467
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHH----HHH-HhcCceEEEcc-CChhHHHHHH
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRD----TEA-TYKDKYRGWVG-FNVPISHRIT 454 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~----~~~-~~~~~~~~~~~-~~~~~~~~ll 454 (576)
++++|+||+.+.||++.+++|+..+.+ ++++|+|+|++++........ +.+ ....++.+..+ .+.+....++
T Consensus 186 ~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~ 265 (366)
T cd03822 186 PVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELF 265 (366)
T ss_pred eEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHH
Confidence 899999999999999999999999976 589999999986433332221 332 23456666656 4566677899
Q ss_pred hcCCEEEeCCCCC--CCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 455 AGCDILLMPSRFE--PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 455 ~~~Dv~v~ps~~E--~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
+.||++++||.+| ++|++++|||++|+|+|+++.|+ .+.+.+ +.+|++++++|+++++++|..++.
T Consensus 266 ~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~----------~~~g~~~~~~d~~~~~~~l~~l~~- 333 (366)
T cd03822 266 SAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLD----------GGTGLLVPPGDPAALAEAIRRLLA- 333 (366)
T ss_pred hhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeee----------CCCcEEEcCCCHHHHHHHHHHHHc-
Confidence 9999999999999 99999999999999999999999 666666 689999999999999999998875
Q ss_pred hhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 533 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
+++.+.++++++ ..++|||+.++++|.++|+
T Consensus 334 ---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 334 ---DPELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred ---ChHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 778888888877 3456999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-31 Score=277.01 Aligned_cols=382 Identities=16% Similarity=0.057 Sum_probs=233.4
Q ss_pred EEEEeeccCCccccC-cHHHHHhhHHHHHHhC--CCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEE
Q 008154 68 IVFVTAEAAPYSKTG-GLGDVCGSLPVALAAR--GHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 144 (576)
Q Consensus 68 I~~~s~e~~P~~~~G-G~~~~~~~la~~l~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (576)
|+|+ +|+...| |.++++.+.+++|++. ||+|+++|.++..... ..... ...+++.
T Consensus 3 ~~f~----hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~--~~l~~---~~~~f~~------------- 60 (419)
T cd03806 3 VGFF----HPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPE--EILEK---VESRFNI------------- 60 (419)
T ss_pred EEEE----CCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHH--HHHHH---HHHhcCe-------------
Confidence 6777 6665566 9999999999999998 8999999988755321 00000 0011111
Q ss_pred eeecCeEEEEec-CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 145 EYREGVDWVFVD-HPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 145 ~~~~gv~v~~l~-~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
...++++++.+. ...+..+ ..++. + -.. ...+. .+...++.+. .+ +||||..|.+.+...+....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~-~~~~r----~-~~~--~~~~~-~~~~~~~~~~--~~---~pDv~i~~~g~~~~~~~~~~ 126 (419)
T cd03806 61 ELDRPRIVFFLLKYRKLVEA-STYPR----F-TLL--GQALG-SMILGLEALL--KL---VPDIFIDTMGYPFTYPLVRL 126 (419)
T ss_pred ecCCCceEEEEecceeeecc-ccCCc----e-eeH--HHHHH-HHHHHHHHHH--hc---CCCEEEEcCCcccHHHHHHH
Confidence 122455544441 1111111 12221 0 001 11111 1111111110 11 69999888655544343321
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhh--cCC---------ChhhhcccccccccccccccCCcCccchhHHH
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKN--LGL---------PSEWYGALEWVFPTWARTHALDTGEAVNVLKG 292 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (576)
. .++|+|+.+|-|. .+.+++.. .+. ....+....+.+. +.-...+++.
T Consensus 127 --~------~~~~~i~y~h~P~----~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y---------~~~~~~~~~~ 185 (419)
T cd03806 127 --L------GGCPVGAYVHYPT----ISTDMLQKVRSREASYNNSATIARSPVLSKAKLLY---------YRLFAFLYGL 185 (419)
T ss_pred --h------cCCeEEEEecCCc----chHHHHHHHhhccccccCccchhccchHHHHHHHH---------HHHHHHHHHH
Confidence 1 4689999999221 11122211 111 0000000000000 0000126777
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
+++.||.++++|+++.+.+.+ .+.. ..++.+|+||+|++.+.+....
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~---------~~~~-~~~~~vi~~gvd~~~~~~~~~~----------------------- 232 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS---------LWKR-NTKPSIVYPPCDVEELLKLPLD----------------------- 232 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH---------HhCc-CCCcEEEcCCCCHHHhcccccc-----------------------
Confidence 889999999999998877632 2222 2478999999998766543210
Q ss_pred HcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C-----CcEEEEEeCCCh----hhHHHHHHHHHH--hcCce
Q 008154 373 ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D-----DIQFVMLGSGDP----QFESWMRDTEAT--YKDKY 439 (576)
Q Consensus 373 ~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~-----~~~lii~G~g~~----~~~~~~~~~~~~--~~~~~ 439 (576)
...+..+|+|+||+.+.||++.+++|++.+.+ + +++++|+|++.. .+.+.++.+.+. +..++
T Consensus 233 -----~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V 307 (419)
T cd03806 233 -----EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKV 307 (419)
T ss_pred -----cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeE
Confidence 01356799999999999999999999999875 2 599999998732 122222333322 23456
Q ss_pred EEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcccc-ccccc---cccccccCCCCCcceeEeC
Q 008154 440 RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL-RDTVE---NFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 440 ~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~-~e~i~---~~~~~~~~~~~~~~G~~~~ 515 (576)
.+....+.+....+|+.||++|+||..|+||++++||||||+|+|+++.||. .|++. + +.+|++++
T Consensus 308 ~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~----------g~~G~l~~ 377 (419)
T cd03806 308 EFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDG----------GPTGFLAS 377 (419)
T ss_pred EEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCC----------CCceEEeC
Confidence 5555456677779999999999999999999999999999999999998775 57776 5 78999974
Q ss_pred CCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHH
Q 008154 516 PLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAI 559 (576)
Q Consensus 516 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~ 559 (576)
|+++++++|.+++.+ +++.+..+.+++ ..++|||+++.+
T Consensus 378 --d~~~la~ai~~ll~~---~~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 378 --TAEEYAEAIEKILSL---SEEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred --CHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 899999999999862 333333333333 467899998754
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-30 Score=266.53 Aligned_cols=341 Identities=17% Similarity=0.155 Sum_probs=239.9
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+ | +|.++.+..++++|.++||+|+++++............. .
T Consensus 1 ki~~~~~~~-~----~~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~-------------------------~ 50 (355)
T cd03799 1 KIAYLVKEF-P----RLSETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDR-------------------------A 50 (355)
T ss_pred CEEEECCCC-C----CcchHHHHHHHHHHHhCCCeEEEEEecCccccccccccc-------------------------c
Confidence 699999875 4 337889999999999999999999976433211000000 0
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
.+..+. |. ................++.. +||+||+|..........+..+.
T Consensus 51 -~~~~~~-------------~~-------~~~~~~~~~~~~~~~~~~~~--------~~Dii~~~~~~~~~~~~~~~~~~ 101 (355)
T cd03799 51 -ELARTR-------------YL-------ARSLALLAQALVLARELRRL--------GIDHIHAHFGTTPATVAMLASRL 101 (355)
T ss_pred -cccchH-------------HH-------HHHHHHHHHHHHHHHHHHhc--------CCCEEEECCCCchHHHHHHHHHh
Confidence 000000 00 00111111112222222212 79999999865544444444433
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.+++++++.|........ ...+++..++.+|.++++|+.
T Consensus 102 ------~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 102 ------GGIPYSFTAHGKDIFRSP-----------------------------------DAIDLDEKLARADFVVAISEY 140 (355)
T ss_pred ------cCCCEEEEEecccccccC-----------------------------------chHHHHHHHhhCCEEEECCHH
Confidence 368999999964211000 002556778899999999999
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.+ .+.....++.++|||+|.+.+.+.... ...+.+.|+
T Consensus 141 ~~~~l~~---------~~~~~~~~~~vi~~~~d~~~~~~~~~~----------------------------~~~~~~~i~ 183 (355)
T cd03799 141 NRQQLIR---------LLGCDPDKIHVVHCGVDLERFPPRPPP----------------------------PPGEPLRIL 183 (355)
T ss_pred HHHHHHH---------hcCCCcccEEEEeCCcCHHHcCCcccc----------------------------ccCCCeEEE
Confidence 8877642 223456789999999998776543200 013568899
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccC-ChhHHHHHHhcCCEEEe
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGF-NVPISHRITAGCDILLM 462 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~ 462 (576)
++|++.+.||++.+++++..+.+ ++++++++|.++. .+...+.+.+. ...++. +.++ +.+.+..+++.||++++
T Consensus 184 ~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~v~-~~g~~~~~~l~~~~~~adi~l~ 261 (355)
T cd03799 184 SVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL-RDELEALIAELGLEDRVT-LLGAKSQEEVRELLRAADLFVL 261 (355)
T ss_pred EEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc-HHHHHHHHHHcCCCCeEE-ECCcCChHHHHHHHHhCCEEEe
Confidence 99999999999999999999876 4899999999863 34444444332 233444 4444 55667789999999999
Q ss_pred CCCC------CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhC
Q 008154 463 PSRF------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 536 (576)
Q Consensus 463 ps~~------E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~ 536 (576)
||.. |++|++++|||++|+|+|+++.|+..|++.+ +.+|++++++|+++++++|.+++. +
T Consensus 262 ~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~ 327 (355)
T cd03799 262 PSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVED----------GETGLLVPPGDPEALADAIERLLD----D 327 (355)
T ss_pred cceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhC----------CCceEEeCCCCHHHHHHHHHHHHh----C
Confidence 9998 9999999999999999999999999999988 779999999999999999999876 7
Q ss_pred HHHHHHHHHHH---HhhhCCHHHHHHH
Q 008154 537 KSSWEGLMRRG---MEKDYTWENAAIQ 560 (576)
Q Consensus 537 ~~~~~~~~~~a---~~~~fs~~~~~~~ 560 (576)
++.+.++++++ +.++|||+.++++
T Consensus 328 ~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 328 PELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 77788888877 4578999998865
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-30 Score=270.23 Aligned_cols=360 Identities=18% Similarity=0.168 Sum_probs=246.1
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+.|. ..||+++++.+++++|++.||.|+++++............
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~--------------------------- 52 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLR--------------------------- 52 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccch---------------------------
Confidence 588888876662 4799999999999999999999999987643321110000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..... ........ . ...+............. .+||+||++.+..... +.
T Consensus 53 -~~~~~--~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~--------~~~Dii~~~~~~~~~~------~~ 101 (365)
T cd03809 53 -AALRL--LLRLPRRL---L-----------WGLLFLLRAGDRLLLLL--------LGLDLLHSPHNTAPLL------RL 101 (365)
T ss_pred -hcccc--cccccccc---c-----------cchhhHHHHHHHHHhhh--------cCCCeeeecccccCcc------cC
Confidence 00000 00000000 0 00110111111111111 1799999998766554 11
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.++|+++++|+..+... + .... .... .....+++..++.+|.++++|+.
T Consensus 102 ------~~~~~i~~~hd~~~~~~-~----~~~~--~~~~------------------~~~~~~~~~~~~~~d~~i~~s~~ 150 (365)
T cd03809 102 ------RGVPVVVTIHDLIPLRF-P----EYFS--PGFR------------------RYFRRLLRRALRRADAIITVSEA 150 (365)
T ss_pred ------CCCCEEEEeccchhhhC-c----ccCC--HHHH------------------HHHHHHHHHHHHHcCEEEEccHH
Confidence 57999999998632110 0 0000 0000 00123567788999999999999
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
.++.+. ..+.....++.++|||++...+.+.... . +...... ++..+|+
T Consensus 151 ~~~~~~---------~~~~~~~~~~~vi~~~~~~~~~~~~~~~-------------------~-~~~~~~~--~~~~~i~ 199 (365)
T cd03809 151 TKRDLL---------RYLGVPPDKIVVIPLGVDPRFRPPPAEA-------------------E-VLRALYL--LPRPYFL 199 (365)
T ss_pred HHHHHH---------HHhCcCHHHEEeeccccCccccCCCchH-------------------H-HHHHhcC--CCCCeEE
Confidence 887763 2334456789999999998776554321 1 2222323 4678999
Q ss_pred EecccccccCHHHHHHHHHhhhcC--CcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~~--~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
++||+.+.||++.+++++..+.+. +++++++|.+........+.+.+. ...++......+.+.+..+++.||++++|
T Consensus 200 ~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~p 279 (365)
T cd03809 200 YVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFP 279 (365)
T ss_pred EeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhccc
Confidence 999999999999999999999774 599999998765444444443222 33344443333566677899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++|||++|+|||+++.|+..|.+. .+|++++++|+++++++|.+++. |++.+.++
T Consensus 280 s~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~------------~~~~~~~~~~~~~~~~~i~~l~~----~~~~~~~~ 343 (365)
T cd03809 280 SLYEGFGLPVLEAMACGTPVIASNISSLPEVAG------------DAALYFDPLDPEALAAAIERLLE----DPALREEL 343 (365)
T ss_pred chhccCCCCHHHHhcCCCcEEecCCCCccceec------------CceeeeCCCCHHHHHHHHHHHhc----CHHHHHHH
Confidence 999999999999999999999999999999885 47888899999999999999865 88888888
Q ss_pred HHHH--HhhhCCHHHHHHHHHH
Q 008154 544 MRRG--MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 544 ~~~a--~~~~fs~~~~~~~y~~ 563 (576)
++++ ..++|+|++++++|.+
T Consensus 344 ~~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 344 RERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHHHHhCCHHHHHHHHhC
Confidence 8877 4678999999998863
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-30 Score=266.24 Aligned_cols=366 Identities=22% Similarity=0.222 Sum_probs=241.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..++|. .||.++.+..++++|+++||+|.++++..........
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~----------------------------- 49 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEE----------------------------- 49 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccc-----------------------------
Confidence 699999998883 7999999999999999999999999976543211000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccc-hHHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG-LVPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~-~~~~~l~~~ 225 (576)
...+...........+....+ .+.......+... +||+||+|..... .....+.++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~--------~~Div~~~~~~~~~~~~~~~~~~ 106 (374)
T cd03817 50 VVVVRPFRVPTFKYPDFRLPL---------------PIPRALIIILKEL--------GPDIVHTHTPFSLGLLGLRVARK 106 (374)
T ss_pred cccccccccccchhhhhhccc---------------cHHHHHHHHHhhc--------CCCEEEECCchhhhhHHHHHHHH
Confidence 000111000000000000000 0111111112111 7999999874332 222222222
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccc-hhHHHHHHhccceeccC
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAV-NVLKGAIVTADRLLTVS 304 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~ad~v~~vS 304 (576)
.++|+|++.|+... ............... ... .+++..++.||.++++|
T Consensus 107 -------~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 107 -------LGIPVVATYHTMYE------DYTHYVPLGRLLARA-----------------VVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred -------cCCCEEEEecCCHH------HHHHHHhcccchhHH-----------------HHHHHHHHHHhhhCCEEEecc
Confidence 47899999997521 111111111100000 001 35667788999999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+...+.+.. .. ...++.++|||+|...+.+... ...++..+++ .+.++
T Consensus 157 ~~~~~~~~~----------~~-~~~~~~vi~~~~~~~~~~~~~~-------------------~~~~~~~~~~--~~~~~ 204 (374)
T cd03817 157 EKIADLLRE----------YG-VKRPIEVIPTGIDLDRFEPVDG-------------------DDERRKLGIP--EDEPV 204 (374)
T ss_pred HHHHHHHHh----------cC-CCCceEEcCCccchhccCccch-------------------hHHHHhcCCC--CCCeE
Confidence 987766531 11 2345899999999887765432 2224455554 46789
Q ss_pred EEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
|+++|++.+.||++.+++++..+.+ ++++++++|.++. .+...+.+.+ ....++.+....+.+....+++.||+++
T Consensus 205 i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l 283 (374)
T cd03817 205 LLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPE-REELEELARELGLADRVIFTGFVPREELPDYYKAADLFV 283 (374)
T ss_pred EEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCch-HHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEE
Confidence 9999999999999999999999876 6899999999852 3333333322 2233454443335566778999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHH
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 541 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~ 541 (576)
+||..|++|++++|||++|+|||+++.|++.|.+.+ +.+|+++++.+. +++++|.+++. +++.+.
T Consensus 284 ~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~----------~~~g~~~~~~~~-~~~~~i~~l~~----~~~~~~ 348 (374)
T cd03817 284 FASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVAD----------GENGFLFPPGDE-ALAEALLRLLQ----DPELRR 348 (374)
T ss_pred ecccccCcChHHHHHHHcCCcEEEeCCCChhhheec----------CceeEEeCCCCH-HHHHHHHHHHh----ChHHHH
Confidence 999999999999999999999999999999999998 899999998777 88888888875 778778
Q ss_pred HHHHHHH--hhhCCHHHHHHHHHHHHHH
Q 008154 542 GLMRRGM--EKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 542 ~~~~~a~--~~~fs~~~~~~~y~~~y~~ 567 (576)
++++++. .+++. +++++.++|++
T Consensus 349 ~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 349 RLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 8888773 33444 56667776654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-30 Score=264.03 Aligned_cols=355 Identities=21% Similarity=0.170 Sum_probs=237.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..++|. ..||.++++..++++|+++||+|+++++........ ...
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~---~~~------------------------- 51 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQD---KEV------------------------- 51 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcc---ccc-------------------------
Confidence 699999988773 479999999999999999999999998754332110 000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH--HHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY--TLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
.+......... ........... .....+ ..+.....+.+... +||+||+|.+.......+...
T Consensus 52 -~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~dii~~~~~~~~~~~~~~~~ 116 (359)
T cd03823 52 -IGVVVYGRPID-EVLRSALPRDL-----FHLSDYDNPAVVAEFARLLEDF--------RPDVVHFHHLQGLGVSILRAA 116 (359)
T ss_pred -ccceeeccccc-cccCCCchhhh-----hHHHhccCHHHHHHHHHHHHHc--------CCCEEEECCccchHHHHHHHH
Confidence 00000000000 00000000000 000000 11122222332222 799999998643322222222
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
+. .++|+|++.|+..... +. ... .....|.++++|
T Consensus 117 ~~------~~~~~i~~~hd~~~~~--~~---------~~~----------------------------~~~~~d~ii~~s 151 (359)
T cd03823 117 RD------RGIPIVLTLHDYWLIC--PR---------QGL----------------------------FKKGGDAVIAPS 151 (359)
T ss_pred Hh------cCCCEEEEEeeeeeec--ch---------hhh----------------------------hccCCCEEEEeC
Confidence 22 4689999999752100 00 000 001239999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+...+.+.. . .....++.+|+||+|...+.+... +.+ .+..+
T Consensus 152 ~~~~~~~~~---------~-~~~~~~~~vi~n~~~~~~~~~~~~--------------------------~~~--~~~~~ 193 (359)
T cd03823 152 RFLLDRYVA---------N-GLFAEKISVIRNGIDLDRAKRPRR--------------------------APP--GGRLR 193 (359)
T ss_pred HHHHHHHHH---------c-CCCccceEEecCCcChhhcccccc--------------------------CCC--CCceE
Confidence 988776532 1 112468999999999877654321 112 46788
Q ss_pred EEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
++++||+.+.||++.+++++..+.+++++|+++|.++..... .... ....++......+.+.+..+++.||++++||
T Consensus 194 i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~-~~~~--~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps 270 (359)
T cd03823 194 FGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEE-SYEL--EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPS 270 (359)
T ss_pred EEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHH-HHhh--cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcC
Confidence 999999999999999999999987678999999998643222 1111 2334444443345667778999999999999
Q ss_pred C-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 465 R-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 465 ~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
. .|++|++++|||++|+|+|+++.++..|.+.+ +.+|++++++|++++++++.+++. |++.+.++
T Consensus 271 ~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~----------~~~g~~~~~~d~~~l~~~i~~l~~----~~~~~~~~ 336 (359)
T cd03823 271 IWPENFPLVIREALAAGVPVIASDIGGMAELVRD----------GVNGLLFPPGDAEDLAAALERLID----DPDLLERL 336 (359)
T ss_pred cccCCCChHHHHHHHCCCCEEECCCCCHHHHhcC----------CCcEEEECCCCHHHHHHHHHHHHh----ChHHHHHH
Confidence 8 79999999999999999999999999999988 789999999999999999999876 78888888
Q ss_pred HHHHHhhhCCHHHHHHHHHHHHH
Q 008154 544 MRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 544 ~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
++++.. .++.+.++++|.++|+
T Consensus 337 ~~~~~~-~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 337 RAGIEP-PRSIEDQAEEYLKLYR 358 (359)
T ss_pred HHhHHH-hhhHHHHHHHHHHHhh
Confidence 887643 3455999999999886
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-31 Score=284.18 Aligned_cols=419 Identities=15% Similarity=0.098 Sum_probs=280.0
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecCC----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFGG---- 136 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~---- 136 (576)
...||+|+++.++.++++++|.+.+.+|..|..|.+.|.. .+.++. ...+.|.+.|+
T Consensus 101 LGnGGLGrLAacfldS~Atl~~P~~GyGirY~yG~F~Q~I-~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~ 179 (794)
T TIGR02093 101 LGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKI-VDGWQVELPDDWLRYGNPWEIRRPDRSYEVRFGGRVELQ 179 (794)
T ss_pred CCCCchHHHHHHHHHHHHhCCCCeEEEEeeecCCceEEEE-ECCEEEEcCCCcCCCCCCceeecCCcEEEEEeCCEEeee
Confidence 4689999999999999999999999999999999665443 222221 22344444442
Q ss_pred --------------------------------eeEEEEEEeeecCeEEEEec------------CCCCCC--CCCCCCCC
Q 008154 137 --------------------------------EQEIAFFHEYREGVDWVFVD------------HPSYHR--PGNPYGDI 170 (576)
Q Consensus 137 --------------------------------~~~~~~~~~~~~gv~v~~l~------------~~~~~~--~~~~y~~~ 170 (576)
...+|+|.... ++.+.++ +....+ +..+|++.
T Consensus 180 ~~~g~~~~~w~~~~~v~avpyD~pi~Gy~~~~vn~LRLW~a~~--~~~f~l~~fn~gdy~~a~~~~~~~e~It~vLYp~D 257 (794)
T TIGR02093 180 PDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAEA--PEEFDLDAFNAGDYYEAVEEKNRAENISRVLYPND 257 (794)
T ss_pred ccCCcceeEeeCceEEEEeecceeecCCCCCceEEEEEEEecC--ccccCHhhccCccHhhhhhChhhcCccccCCcCCC
Confidence 22223333222 1111111 111122 45678761
Q ss_pred CCCCCchHHHH---HHHHHHHHhhc-ccC-----CCCCCCCCCccEEEeCCCccchHHH-HHHhhc----cCCCCCC---
Q 008154 171 NGAFGDNQFRY---TLLCYAACEAP-LVL-----PLGGFTYGEKCIFLVNDWHAGLVPV-LLASKY----RPHGVYK--- 233 (576)
Q Consensus 171 ~~~~~~~~~r~---~~~~~~~~~~~-~~~-----~~~~~~~~~pDVvH~~~~~~~~~~~-~l~~~~----~~~~~~~--- 233 (576)
. .+...+.|+ .+++.++++.+ +++ .+..+. ++.+||+||.|++++.. +|+... ..+..+.
T Consensus 258 ~-~~~Gk~lRLkQeyfl~~aglqdiir~~~~~~~~l~~l~--~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv 334 (794)
T TIGR02093 258 S-TYEGKELRLKQQYFFVSASLQDIIRRHLETHPDLSDFP--KKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDIT 334 (794)
T ss_pred C-ccchHHHHHHHHHHhhhhHHHHHHHHHHHhCCChhhCC--cceEEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 1 112268888 57777666643 222 111222 78999999999998744 333211 1111111
Q ss_pred CCcEEEEeecCCCCC--CCChhhhhhc-CCChhhhcccccccccccc-cccC-----------C--cCccchhHHHHHHh
Q 008154 234 DARSILVIHNLSHQG--VEPAATYKNL-GLPSEWYGALEWVFPTWAR-THAL-----------D--TGEAVNVLKGAIVT 296 (576)
Q Consensus 234 ~~~~v~t~H~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~-----------~--~~~~~~~~~~a~~~ 296 (576)
...++||+||+.+.+ .||.++++.+ +-........-..+....+ ..+. . ....++|..+|+..
T Consensus 335 ~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~ 414 (794)
T TIGR02093 335 TKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVG 414 (794)
T ss_pred HhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHHHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHh
Confidence 237899999997665 7888888543 2111110011111111111 1111 1 13369999999999
Q ss_pred ccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCC---CCCCccccccCCcCCcccch---------
Q 008154 297 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWN---PSSDEHIASHYSIDDLSGKV--------- 364 (576)
Q Consensus 297 ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~---~~~~~~l~~~~~~~~~~~~~--------- 364 (576)
|..|++||+.+.+.+++..+ +.....-+.++..++|||+...|. .+...++++.+.+++|..+.
T Consensus 415 S~~vNGVS~lH~eilk~~~~----~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~ 490 (794)
T TIGR02093 415 SHSVNGVAALHTELLKEDLL----KDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPY 490 (794)
T ss_pred hhhhhhhHHHHHHHHHHHHH----HHHHhhCCCccCCcCCCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhc
Confidence 99999999998876653322 223334567788999999999998 77778888888887775322
Q ss_pred -------------------HhHHHHHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc----C-----CcEEE
Q 008154 365 -------------------QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA----D-----DIQFV 415 (576)
Q Consensus 365 -------------------~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~----~-----~~~li 415 (576)
.....+++..|+..+++.+.++++.||..||+..+ ++..+.++.+ + |.+++
T Consensus 491 ~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~I 570 (794)
T TIGR02093 491 ADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVI 570 (794)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEE
Confidence 12224445667777799999999999999999999 7777666543 2 77999
Q ss_pred EEeCCChhhHHHHHHHHH------H------hcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHc
Q 008154 416 MLGSGDPQFESWMRDTEA------T------YKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRY 479 (576)
Q Consensus 416 i~G~g~~~~~~~~~~~~~------~------~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~ 479 (576)
|+|+++|.+...++.++. . ..+ +++++++|+..++..++++|||+.+.|+ .|++|++.|++|.+
T Consensus 571 FaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alN 650 (794)
T TIGR02093 571 FGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLN 650 (794)
T ss_pred EEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhc
Confidence 999998877666655543 1 223 7999999999999999999999999998 79999999999999
Q ss_pred CCceEEeCccccccccccccccccCCCCCcceeEeC
Q 008154 480 GTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 480 G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
|.++++|.+|++.|+..+.+ ++|+|+|.
T Consensus 651 GaltlgtlDGanvEi~e~vG--------~eN~fiFG 678 (794)
T TIGR02093 651 GALTIGTLDGANVEIREEVG--------AENIFIFG 678 (794)
T ss_pred CcceeecccchhHHHHHHhC--------cccEEEcC
Confidence 99999999999999987522 46777773
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=258.92 Aligned_cols=353 Identities=19% Similarity=0.177 Sum_probs=243.1
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++.. .||..+++..++++|.+.||+|+++++...... ...
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~------------------------------~~~ 44 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE------------------------------ELE 44 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc------------------------------ccc
Confidence 58889764 489999999999999999999999986532210 001
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..++.++.++.... .. .....+ .......+.++.. +||+||+|...+.+...+.....
T Consensus 45 ~~~~~~~~~~~~~~--~~-----------~~~~~~-~~~~~~~~~~~~~--------~~dvv~~~~~~~~~~~~~~~~~~ 102 (359)
T cd03808 45 ALGVKVIPIPLDRR--GI-----------NPFKDL-KALLRLYRLLRKE--------RPDIVHTHTPKPGILGRLAARLA 102 (359)
T ss_pred cCCceEEecccccc--cc-----------ChHhHH-HHHHHHHHHHHhc--------CCCEEEEccccchhHHHHHHHHc
Confidence 13455555542210 00 001111 1112222332222 79999999876666555554422
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
...+++++.|+......... ..... ...+++..++.+|.++++|+.
T Consensus 103 ------~~~~~i~~~~~~~~~~~~~~-------~~~~~---------------------~~~~~~~~~~~~d~ii~~s~~ 148 (359)
T cd03808 103 ------GVPKVIYTVHGLGFVFTSGG-------LKRRL---------------------YLLLERLALRFTDKVIFQNED 148 (359)
T ss_pred ------CCCCEEEEecCcchhhccch-------hHHHH---------------------HHHHHHHHHhhccEEEEcCHH
Confidence 45678888887532111000 00000 012456677899999999998
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.+. .......++.+++||++...+.+.... .+ ++.+.++
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~--~~~~~i~ 192 (359)
T cd03808 149 DRDLALKL--------GIIKKKKTVLIPGSGVDLDRFSPSPEP--------------------------IP--EDDPVFL 192 (359)
T ss_pred HHHHHHHh--------cCCCcCceEEecCCCCChhhcCccccc--------------------------cC--CCCcEEE
Confidence 88766421 111124568889999998766543310 01 4678999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
++||+.+.||++.+++++..+.+ ++++|+|+|.++.........+........+.+.++.. .+..+++.||++++||
T Consensus 193 ~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~adi~i~ps 271 (359)
T cd03808 193 FVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRD-DVPELLAAADVFVLPS 271 (359)
T ss_pred EEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccc-cHHHHHHhccEEEecC
Confidence 99999999999999999999975 68999999999643222211133322223334555533 4568999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 008154 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 544 (576)
Q Consensus 465 ~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 544 (576)
..|++|++++|||++|+|+|+++.++..|.+.+ +.+|++++++|+++++++|.+++. +++.+.+++
T Consensus 272 ~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~----------~~~g~~~~~~~~~~~~~~i~~l~~----~~~~~~~~~ 337 (359)
T cd03808 272 YREGLPRVLLEAMAMGRPVIATDVPGCREAVID----------GVNGFLVPPGDAEALADAIERLIE----DPELRARMG 337 (359)
T ss_pred cccCcchHHHHHHHcCCCEEEecCCCchhhhhc----------CcceEEECCCCHHHHHHHHHHHHh----CHHHHHHHH
Confidence 999999999999999999999999999999987 789999999999999999999765 788888888
Q ss_pred HHH---HhhhCCHHHHHHHHH
Q 008154 545 RRG---MEKDYTWENAAIQYE 562 (576)
Q Consensus 545 ~~a---~~~~fs~~~~~~~y~ 562 (576)
+++ +.++|||+.++++|.
T Consensus 338 ~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 338 QAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHhcCHHHHHHHhh
Confidence 877 467999999999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-31 Score=283.02 Aligned_cols=420 Identities=15% Similarity=0.098 Sum_probs=279.5
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecCC----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFGG---- 136 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~---- 136 (576)
...||+|+++.++.++++++|.+.+.+|..|..|.+.+.... .++. ...+.|.+.|+
T Consensus 104 LGnGGLGrLAacfldS~AtLglP~~G~GirY~yG~F~Q~i~~-G~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~~~~~ 182 (797)
T cd04300 104 LGNGGLGRLAACFLDSLATLGLPGYGYGIRYEYGLFKQKIVD-GYQVELPDNWLRYGNPWEIRRPDVAVPVRFGGRVEHY 182 (797)
T ss_pred CCCCCcchhHHHHHHHHHhCCCCeEEEEecccCCCeEEEEEC-CEEEecCCCccCCCCCceEecCCcEEEEEECCEEEEe
Confidence 468999999999999999999999999999999965543321 1110 22233333332
Q ss_pred --------------------------------eeEEEEEEeeecCeE-EEEec---------CCCCCC--CCCCCCCCCC
Q 008154 137 --------------------------------EQEIAFFHEYREGVD-WVFVD---------HPSYHR--PGNPYGDING 172 (576)
Q Consensus 137 --------------------------------~~~~~~~~~~~~gv~-v~~l~---------~~~~~~--~~~~y~~~~~ 172 (576)
...+|+|....+... ++.+. +.+..+ +..+|++..
T Consensus 183 ~~~G~~~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~~~~~~dl~~fn~gdy~~a~~~~~~~~~It~~LYp~Ds- 261 (797)
T cd04300 183 EDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAEASEEFDLDAFNRGDYIRAVEEKNRAENISKVLYPNDS- 261 (797)
T ss_pred ecCCcceeeecCcceEEeeecceeecCCCCCceEEEEEEEeeCCCCcCHHHhcCCchhhHHhhHHHhhhhhcccCCCCC-
Confidence 233344444433211 22220 111122 446888611
Q ss_pred CCCchHHHH---HHHHHHHHhhc-ccCCC--CCCCC-CCccEEEeCCCccchHHH-HHHhhc----cCCCCCC---CCcE
Q 008154 173 AFGDNQFRY---TLLCYAACEAP-LVLPL--GGFTY-GEKCIFLVNDWHAGLVPV-LLASKY----RPHGVYK---DARS 237 (576)
Q Consensus 173 ~~~~~~~r~---~~~~~~~~~~~-~~~~~--~~~~~-~~pDVvH~~~~~~~~~~~-~l~~~~----~~~~~~~---~~~~ 237 (576)
.+..++.|+ .+++.++++.+ +++.. ..+.. .++.+||+||.|++++.. +++... ..+..+. ...+
T Consensus 262 ~~~Gk~lRL~Qeyfl~sag~qdilr~~~~~~~~~~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~ 341 (797)
T cd04300 262 TEEGKELRLKQQYFFVSASLQDIIRRFKKTHGPLSEFPDKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTF 341 (797)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHHHHhCCChhhCCCceEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhe
Confidence 111277887 57777777664 33311 01111 168999999999998744 332211 1111112 2378
Q ss_pred EEEeecCCCCC--CCChhhhhhcCCChhhhc------------------ccccccccccccccCCcCccchhHHHHHHhc
Q 008154 238 ILVIHNLSHQG--VEPAATYKNLGLPSEWYG------------------ALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297 (576)
Q Consensus 238 v~t~H~~~~~~--~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 297 (576)
+||+||+.+.+ .||.++++.+-. +++. .....+.+++.-. ......++|..+|+..|
T Consensus 342 ~yTnHT~lpealE~wp~~l~~~~lp--r~~~II~~In~~~~~~~~~~~~~~~~~~~~l~ii~-~~~~~~v~Ma~LAi~~S 418 (797)
T cd04300 342 AYTNHTLLPEALEKWPVDLFERLLP--RHLEIIYEINRRFLEEVRAKYPGDEDRIRRMSIIE-EGGEKQVRMAHLAIVGS 418 (797)
T ss_pred eeecCCCchHHhCccCHHHHHHHCh--HHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcccc-cCCCCEEehHHHHHhcC
Confidence 99999997665 788888854421 1111 0011111111111 11134699999999999
Q ss_pred cceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCC---CCCCccccccCCcCCcccchHhH-------
Q 008154 298 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWN---PSSDEHIASHYSIDDLSGKVQCK------- 367 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~---~~~~~~l~~~~~~~~~~~~~~~~------- 367 (576)
..|++||+.+.+-+++.. +......-+.++..++|||+...|. .+...++++++.+++|..+....
T Consensus 419 ~~vNGVS~lH~ei~k~~~----~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~ 494 (797)
T cd04300 419 HSVNGVAALHSELLKETV----FKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFA 494 (797)
T ss_pred cchhhhHHHHHHHHHHhh----HHHHHhhCCCccCCcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcC
Confidence 999999998887664321 1223344567789999999999998 77778888888887775332211
Q ss_pred ---------------------HHHHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc---------CCcEEEE
Q 008154 368 ---------------------IALQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVM 416 (576)
Q Consensus 368 ---------------------~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~---------~~~~lii 416 (576)
..+++..|+..+|+.+.++++.||..||+..+ ++..+.++.+ .|.++||
T Consensus 495 ~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IF 574 (797)
T cd04300 495 DDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIF 574 (797)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEE
Confidence 23344567766799999999999999999999 7777655433 2689999
Q ss_pred EeCCChhhHHHHHHHHH------H------hcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcC
Q 008154 417 LGSGDPQFESWMRDTEA------T------YKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYG 480 (576)
Q Consensus 417 ~G~g~~~~~~~~~~~~~------~------~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G 480 (576)
+|+++|.+...++.++. . ..+ +++++++|+..++..++++|||+.+.|+ .|++|++.|++|.+|
T Consensus 575 aGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNG 654 (797)
T cd04300 575 GGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNG 654 (797)
T ss_pred eccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcC
Confidence 99998877665555543 1 223 7999999999999999999999999998 799999999999999
Q ss_pred CceEEeCccccccccccccccccCCCCCcceeEeC
Q 008154 481 TIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 481 ~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
.++++|.+|++.|+....+ ++|+|+|.
T Consensus 655 altlgtlDGanvEi~e~vG--------~eN~fiFG 681 (797)
T cd04300 655 ALTIGTLDGANVEIAEEVG--------EENIFIFG 681 (797)
T ss_pred ceeeecccchhHHHHHHhC--------cCcEEEeC
Confidence 9999999999999997632 46788873
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=257.96 Aligned_cols=341 Identities=19% Similarity=0.137 Sum_probs=233.9
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++....| .||.++++..++++|++.||+|.+++...... ..+. .
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~----~~~~-------------------------~ 48 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGEP----PFYE-------------------------L 48 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCCC----Cccc-------------------------c
Confidence 58999887554 69999999999999999999999998764320 0000 0
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..++.+..++...... .+ ..........+.++. .+||+||+|++.. ..++....
T Consensus 49 ~~~~~~~~~~~~~~~~---~~------------~~~~~~~~~~~~l~~--------~~~d~i~~~~~~~---~~~~~~~~ 102 (348)
T cd03820 49 DPKIKVIDLGDKRDSK---LL------------ARFKKLRRLRKLLKN--------NKPDVVISFLTSL---LTFLASLG 102 (348)
T ss_pred CCccceeecccccccc---hh------------ccccchHHHHHhhcc--------cCCCEEEEcCchH---HHHHHHHh
Confidence 1233333332111000 00 000011112222221 2799999998761 12222211
Q ss_pred cCCCCCCC-CcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 227 RPHGVYKD-ARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 227 ~~~~~~~~-~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
.+ +|++++.|+....... . .......+.+++.+|.++++|+
T Consensus 103 ------~~~~~~i~~~~~~~~~~~~-------------~-------------------~~~~~~~~~~~~~~d~ii~~s~ 144 (348)
T cd03820 103 ------LKIVKLIVSEHNSPDAYKK-------------R-------------------LRRLLLRRLLYRRADAVVVLTE 144 (348)
T ss_pred ------hccccEEEecCCCccchhh-------------h-------------------hHHHHHHHHHHhcCCEEEEeCH
Confidence 23 4899999975211000 0 0001135677899999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
..... .......++.++|||++...+.+.. + .+..++
T Consensus 145 ~~~~~------------~~~~~~~~~~vi~~~~~~~~~~~~~-----------------------------~--~~~~~i 181 (348)
T cd03820 145 EDRAL------------YYKKFNKNVVVIPNPLPFPPEEPSS-----------------------------D--LKSKRI 181 (348)
T ss_pred HHHHH------------hhccCCCCeEEecCCcChhhccccC-----------------------------C--CCCcEE
Confidence 87511 1234567899999999976554320 1 356899
Q ss_pred EEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+++|++.+.||++.+++++..+.+ ++++|+|+|+++. .....+.+.+......+.+.++ .+.+..+++.||++++|
T Consensus 182 ~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~ad~~i~p 259 (348)
T cd03820 182 LAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPE-REALEALIKELGLEDRVILLGF-TKNIEEYYAKASIFVLT 259 (348)
T ss_pred EEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCC-HHHHHHHHHHcCCCCeEEEcCC-cchHHHHHHhCCEEEeC
Confidence 999999999999999999999974 6899999999863 2333333333222233445555 34456899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCcc-ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
|.+|++|++++|||++|+|||+++.+ +..+++.+ +.+|+++++.|+++++++|.+++. |++.+.+
T Consensus 260 s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~i~~ll~----~~~~~~~ 325 (348)
T cd03820 260 SRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIED----------GVNGLLVPNGDVEALAEALLRLME----DEELRKR 325 (348)
T ss_pred ccccccCHHHHHHHHcCCCEEEecCCCchHhhhcc----------CcceEEeCCCCHHHHHHHHHHHHc----CHHHHHH
Confidence 99999999999999999999999875 45566665 569999999999999999999975 8888888
Q ss_pred HHHHH--HhhhCCHHHHHHHHH
Q 008154 543 LMRRG--MEKDYTWENAAIQYE 562 (576)
Q Consensus 543 ~~~~a--~~~~fs~~~~~~~y~ 562 (576)
+++++ +.++|+|++++++|.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 326 MGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHhCHHHHHHHhc
Confidence 88887 567899999999885
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-29 Score=257.19 Aligned_cols=368 Identities=27% Similarity=0.335 Sum_probs=252.5
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..++|. .||.+.++..++++|++.||+|.++++..........
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~----------------------------- 49 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEE----------------------------- 49 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceee-----------------------------
Confidence 699999987773 6999999999999999999999999976433211000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
......... ..... .. ...............+... +||+||+|++........... .
T Consensus 50 ~~~~~~~~~--~~~~~---~~---------~~~~~~~~~~~~~~~~~~~--------~~Dii~~~~~~~~~~~~~~~~-~ 106 (374)
T cd03801 50 VGGIVVVRP--PPLLR---VR---------RLLLLLLLALRLRRLLRRE--------RFDVVHAHDWLALLAAALAAR-L 106 (374)
T ss_pred ecCcceecC--Ccccc---cc---------hhHHHHHHHHHHHHHhhhc--------CCcEEEEechhHHHHHHHHHH-h
Confidence 000000000 00000 00 0111111222222222222 799999998777665542222 2
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.++|++++.|+......... ..... .....+.+..++.+|.++++|+.
T Consensus 107 ------~~~~~i~~~h~~~~~~~~~~-----~~~~~---------------------~~~~~~~~~~~~~~d~~i~~s~~ 154 (374)
T cd03801 107 ------LGIPLVLTVHGLEFGRPGNE-----LGLLL---------------------KLARALERRALRRADRIIAVSEA 154 (374)
T ss_pred ------cCCcEEEEeccchhhccccc-----hhHHH---------------------HHHHHHHHHHHHhCCEEEEecHH
Confidence 57899999998743211100 00000 01123566778899999999998
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.. .......++.++|||++...+.+.. . ..+.....+ .+.++++
T Consensus 155 ~~~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~-~-------------------~~~~~~~~~--~~~~~i~ 203 (374)
T cd03801 155 TREELRE---------LGGVPPEKITVIPNGVDTERFRPAP-R-------------------AARRRLGIP--EDEPVIL 203 (374)
T ss_pred HHHHHHh---------cCCCCCCcEEEecCcccccccCccc-h-------------------HHHhhcCCc--CCCeEEE
Confidence 8877642 2233346899999999987765431 0 111222222 4678999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
++|++...||++.+++++..+.+ ++++++++|.++ ......+.+.+ ....++......+.+....+++.||++++|
T Consensus 204 ~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~-~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~ 282 (374)
T cd03801 204 FVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP-LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLP 282 (374)
T ss_pred EecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH-HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEec
Confidence 99999999999999999999876 489999999774 23333333322 233344443333556677899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
+..|++|++++|||++|+|+|+++.++..|.+.+ +.+|+.+++.|+++++++|.+++. +++.+.++
T Consensus 283 ~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~~~~~~~~ 348 (374)
T cd03801 283 SLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVED----------GETGLLVPPGDPEALAEAILRLLD----DPELRRRL 348 (374)
T ss_pred chhccccchHHHHHHcCCcEEEeCCCChhHHhcC----------CcceEEeCCCCHHHHHHHHHHHHc----ChHHHHHH
Confidence 9999999999999999999999999999999987 789999999999999999999875 77888888
Q ss_pred HHHH---HhhhCCHHHHHHHHHHHHH
Q 008154 544 MRRG---MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 544 ~~~a---~~~~fs~~~~~~~y~~~y~ 566 (576)
++++ ..+.|+|+++++++.++|+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 349 GEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 8876 4679999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=262.42 Aligned_cols=370 Identities=12% Similarity=0.024 Sum_probs=234.8
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEE
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 144 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (576)
..||++++. + -+|....+.++|++|+++||+|++|+...+... .. .
T Consensus 3 ~~~~~~~~~---~---~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~-----~~-----------------------~ 48 (415)
T cd03816 3 RKRVCVLVL---G---DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPH-----DE-----------------------I 48 (415)
T ss_pred ccEEEEEEe---c---ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCC-----HH-----------------------H
Confidence 456888875 3 255666778899999999999999986532210 00 0
Q ss_pred eeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHH-HH---HHHHHhhcccCCCCCCCCCCccEEEeCCCccc--hH
Q 008154 145 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYT-LL---CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG--LV 218 (576)
Q Consensus 145 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~-~~---~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~--~~ 218 (576)
....|+.++.+..+.... .. .....++. .+ .......+.. ..+||+||+|..... ..
T Consensus 49 ~~~~~v~~~~~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~Dvi~~~~~~~~~~~~ 111 (415)
T cd03816 49 LSNPNITIHPLPPPPQRL----NK------LPFLLFAPLKVLWQFFSLLWLLYK-------LRPADYILIQNPPSIPTLL 111 (415)
T ss_pred hcCCCEEEEECCCCcccc----cc------chHHHHHHHHHHHHHHHHHHHHHh-------cCCCCEEEEeCCCCchHHH
Confidence 112567777775332000 00 01111111 11 1111111111 117999999874432 22
Q ss_pred HHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCC-hhhhcccccccccccccccCCcCccchhHHHHHHhc
Q 008154 219 PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP-SEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297 (576)
Q Consensus 219 ~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 297 (576)
...+..+. .++|+|+|.|+..+. .. .++.. ...+... ...+++...+.|
T Consensus 112 ~a~~~~~~------~~~~~V~~~h~~~~~------~~-~~~~~~~~~~~~~-----------------~~~~e~~~~~~a 161 (415)
T cd03816 112 IAWLYCLL------RRTKLIIDWHNYGYT------IL-ALKLGENHPLVRL-----------------AKWYEKLFGRLA 161 (415)
T ss_pred HHHHHHHH------hCCeEEEEcCCchHH------HH-hcccCCCCHHHHH-----------------HHHHHHHHhhcC
Confidence 22222222 468999999975210 00 01100 0000000 012566677899
Q ss_pred cceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH-----
Q 008154 298 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK----- 372 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----- 372 (576)
|.++++|+.+.+.+. + ...+..++.+||||.+ ..|.|..... ....+.+
T Consensus 162 d~ii~vS~~~~~~l~---------~-~~~~~~ki~vI~Ng~~-~~f~p~~~~~---------------~~~~~~~~~~~~ 215 (415)
T cd03816 162 DYNLCVTKAMKEDLQ---------Q-FNNWKIRATVLYDRPP-EQFRPLPLEE---------------KHELFLKLAKTF 215 (415)
T ss_pred CEeeecCHHHHHHHH---------h-hhccCCCeeecCCCCH-HHceeCcHHH---------------HHHHHHhccccc
Confidence 999999999888763 1 2456788999999954 4555443210 0111111
Q ss_pred --------HcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--------CCcEEEEEeCCChhhHHHHHHHHHHhc
Q 008154 373 --------ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--------DDIQFVMLGSGDPQFESWMRDTEATYK 436 (576)
Q Consensus 373 --------~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--------~~~~lii~G~g~~~~~~~~~~~~~~~~ 436 (576)
..++.. ++..+++++||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..++..+.+++...
T Consensus 216 ~~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~-~~~~l~~~~~~~~l 293 (415)
T cd03816 216 LTRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP-LKEKYLERIKELKL 293 (415)
T ss_pred cccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc-cHHHHHHHHHHcCC
Confidence 112221 345678889999999999999999999863 369999999995 34555555544333
Q ss_pred CceEEEccC-ChhHHHHHHhcCCEEEeCCC---CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCccee
Q 008154 437 DKYRGWVGF-NVPISHRITAGCDILLMPSR---FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW 512 (576)
Q Consensus 437 ~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~---~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~ 512 (576)
.+++++.++ +.+....+|+.||+++.|+. .|++|++++||||||+|||+++.|+..|++.+ +.+|+
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~----------~~~G~ 363 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH----------GENGL 363 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC----------CCCEE
Confidence 456666664 55667789999999997533 47899999999999999999999999999998 89999
Q ss_pred EeCCCCHHHHHHHHHHHHHHhhhC---HHHHHHHHHHHHh-hhCCHHHHHH
Q 008154 513 SFLPLSEESMLTALRFAIRTYREH---KSSWEGLMRRGME-KDYTWENAAI 559 (576)
Q Consensus 513 ~~~~~d~~~la~~i~~~l~~~~~~---~~~~~~~~~~a~~-~~fs~~~~~~ 559 (576)
+++ |+++++++|.+++. | ++.+.+|++++.+ ..++|++-.+
T Consensus 364 lv~--d~~~la~~i~~ll~----~~~~~~~~~~m~~~~~~~~~~~~~~~~~ 408 (415)
T cd03816 364 VFG--DSEELAEQLIDLLS----NFPNRGKLNSLKKGAQEESELRWDENWD 408 (415)
T ss_pred EEC--CHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHhhhcCHHHHHH
Confidence 994 89999999999876 6 8888999888742 3566655433
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=256.42 Aligned_cols=240 Identities=36% Similarity=0.572 Sum_probs=175.0
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC----ceeEEEeecCCeeEEEE
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL----GCCMKICCFGGEQEIAF 142 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 142 (576)
||+++|+|+.|+.++||++.++..|+++|+++||+|.||+|.|+.............+. ...+.+.. ...+++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~v 77 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV---WYEVRV 77 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-------EEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc---ceEEEE
Confidence 69999999999999999999999999999999999999999985432111000000000 00122222 267788
Q ss_pred EEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 143 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
++...+|+++|+++++.+..+..+|++..++|.|+..||++|++++.+++..++. +||||||||||++++|.++
T Consensus 78 ~~~~~~~v~v~~i~~~~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~------~pDIIH~hDW~tal~p~~l 151 (245)
T PF08323_consen 78 YRYPVDGVPVYFIDNPEYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGW------KPDIIHCHDWHTALAPLYL 151 (245)
T ss_dssp EEEEETTEEEEEEESHHHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-------S-SEEEEECGGGTTHHHHH
T ss_pred EEEEcCCccEEEecChhhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCC------CCCEEEecCchHHHHHHHh
Confidence 9999999999999988866666699987778899999999999999999887643 8999999999999999999
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
+......+...++|+|+|+|+..+++.++.+.+..+|++...+... ....+.+.+|+++.++..||.|++
T Consensus 152 k~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~----------~~~~~~~~in~lk~gi~~AD~v~T 221 (245)
T PF08323_consen 152 KERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNL----------DEYEFYGQINFLKAGIVYADKVTT 221 (245)
T ss_dssp HHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-ST----------TTTEETTEEEHHHHHHHHSSEEEE
T ss_pred ccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccc----------cccccccccCHHHHHHHhcCEeee
Confidence 9876544444579999999999999999888777788775443211 122336678999999999999999
Q ss_pred cCccchhhhccccCCcchhhhhh
Q 008154 303 VSKGYSWEITTVEGGYGLHEILS 325 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~ 325 (576)
||+.+++++.+..++.||++.+.
T Consensus 222 VS~~Ya~Ei~~~~~g~GL~~~l~ 244 (245)
T PF08323_consen 222 VSPTYAREIQTPEFGEGLEGLLR 244 (245)
T ss_dssp SSHHHHHHTTSHHHHTT-HHHHH
T ss_pred CCHHHHHHHhCcccCCChHHHhc
Confidence 99999999999888888887654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-28 Score=249.89 Aligned_cols=371 Identities=22% Similarity=0.251 Sum_probs=246.0
Q ss_pred EEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeee
Q 008154 68 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYR 147 (576)
Q Consensus 68 I~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (576)
|++++..++| ...||.++++..++++|++.||+|+++++.......... .. . .. .
T Consensus 1 iLii~~~~p~-~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~-~~-~---~~-------------------~ 55 (377)
T cd03798 1 ILVISSLYPP-PNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDL-LK-G---RL-------------------V 55 (377)
T ss_pred CeEeccCCCC-CCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhh-cc-c---cc-------------------c
Confidence 5777776555 235999999999999999999999999875332211000 00 0 00 0
Q ss_pred cCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhcc
Q 008154 148 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR 227 (576)
Q Consensus 148 ~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~ 227 (576)
......... ... ... ........+.......+... ..+||+||+|.............+.
T Consensus 56 ~~~~~~~~~---~~~---~~~-------~~~~~~~~~~~~~~~~l~~~------~~~~dii~~~~~~~~~~~~~~~~~~- 115 (377)
T cd03798 56 GVERLPVLL---PVV---PLL-------KGPLLYLLAARALLKLLKLK------RFRPDLIHAHFAYPDGFAAALLKRK- 115 (377)
T ss_pred cccccccCc---chh---hcc-------ccchhHHHHHHHHHHHHhcc------cCCCCEEEEeccchHHHHHHHHHHh-
Confidence 000000000 000 000 00111122223333333200 1279999999544333222222222
Q ss_pred CCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccc
Q 008154 228 PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGY 307 (576)
Q Consensus 228 ~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~ 307 (576)
.++|++++.|+......... .. ...+++..++.+|.++++|+..
T Consensus 116 -----~~~~~i~~~h~~~~~~~~~~----------~~---------------------~~~~~~~~~~~~d~ii~~s~~~ 159 (377)
T cd03798 116 -----LGIPLVVTLHGSDVNLLPRK----------RL---------------------LRALLRRALRRADAVIAVSEAL 159 (377)
T ss_pred -----cCCCEEEEeecchhcccCch----------hh---------------------HHHHHHHHHhcCCeEEeCCHHH
Confidence 46899999998632211000 00 1235667788999999999988
Q ss_pred hhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEE
Q 008154 308 SWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGF 387 (576)
Q Consensus 308 ~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~ 387 (576)
.+.+.+ .. ....++.+++||+|...+.+.... .. ...+.. .+.+++++
T Consensus 160 ~~~~~~---------~~-~~~~~~~~i~~~~~~~~~~~~~~~------------------~~--~~~~~~--~~~~~i~~ 207 (377)
T cd03798 160 ADELKA---------LG-IDPEKVTVIPNGVDTERFSPADRA------------------EA--RKLGLP--EDKKVILF 207 (377)
T ss_pred HHHHHH---------hc-CCCCceEEcCCCcCcccCCCcchH------------------HH--HhccCC--CCceEEEE
Confidence 876531 11 356789999999998877654421 11 222323 46789999
Q ss_pred ecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 388 IGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 388 ~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
+|++.+.||++.+++++..+.+ ++++++++|.++. .....+.+... ...++......+.+....+++.||++++|+
T Consensus 208 ~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~ 286 (377)
T cd03798 208 VGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL-REALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPS 286 (377)
T ss_pred eccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-hHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecch
Confidence 9999999999999999999976 4899999999853 23333333321 233444443346666778999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 008154 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 544 (576)
Q Consensus 465 ~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 544 (576)
..|++|++++|||++|+|+|+++.|+..|.+.+ +.+|+.+++.|+++++++|.+++. +++. +++
T Consensus 287 ~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~~~~--~~~ 350 (377)
T cd03798 287 LREGFGLVLLEAMACGLPVVATDVGGIPEIITD----------GENGLLVPPGDPEALAEAILRLLA----DPWL--RLG 350 (377)
T ss_pred hhccCChHHHHHHhcCCCEEEecCCChHHHhcC----------CcceeEECCCCHHHHHHHHHHHhc----CcHH--HHh
Confidence 999999999999999999999999999999988 788999999999999999999986 4443 333
Q ss_pred HHH---HhhhCCHHHHHHHHHHHHHHh
Q 008154 545 RRG---MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 545 ~~a---~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+++ +.++|+|+.+++++.++|+++
T Consensus 351 ~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 351 RAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 333 567999999999999998753
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=256.35 Aligned_cols=375 Identities=13% Similarity=0.114 Sum_probs=223.3
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhC-CCcEEEEEecCCCCCCcccchhccccCceeEEEeec-CCeeEE
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCF-GGEQEI 140 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 140 (576)
+++.+|++|+.-.+|+- .|..+--.-.|..|++. |++|+.|.|=-.. ......|.....+ ..| .+..++
T Consensus 320 ~~~r~~~ivTtAslPWm--TGtavnpL~rAayLa~~~~~~VtlviPWl~~-~dq~~vy~~~~~F------~~p~eQe~~i 390 (794)
T PLN02501 320 DGKRHVAIVTTASLPWM--TGTAVNPLFRAAYLAKSAKQNVTLLVPWLCK-SDQELVYPNNLTF------SSPEEQESYI 390 (794)
T ss_pred cCCCeEEEEEcccCccc--ccccccHHHHHHHhcccCCceEEEEEecCCc-cccccccCCCccc------CCHHHHHHHH
Confidence 34578999999999983 66666666667778887 6999999873221 1111111110000 000 011111
Q ss_pred EEEEee-e---cCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCC-Ccc
Q 008154 141 AFFHEY-R---EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVND-WHA 215 (576)
Q Consensus 141 ~~~~~~-~---~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~-~~~ 215 (576)
+-|-.. + .+..+.+.+.. |.. ..+-++-...+.+.+... +|||||+++ .+.
T Consensus 391 r~wl~~r~g~~~~~~i~fYpg~-~~~---------------~~~SI~p~gdI~~~L~~f--------~PDVVHLatP~~L 446 (794)
T PLN02501 391 RNWLEERIGFKADFKISFYPGK-FSK---------------ERRSIIPAGDTSQFIPSK--------DADIAILEEPEHL 446 (794)
T ss_pred HHHHHHhcCCCCCceEEeecch-hcc---------------CCccccchHHHHHHhhcc--------CCCEEEECCchhh
Confidence 111111 0 12222222211 111 011111222333333222 899999997 344
Q ss_pred chH--HHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCC--hhhhcccccccccccccccCCcCccchhHH
Q 008154 216 GLV--PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP--SEWYGALEWVFPTWARTHALDTGEAVNVLK 291 (576)
Q Consensus 216 ~~~--~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (576)
++. +...+.+ .+ |+|.++||.. +. .+.+.+.. ........+ .+.+
T Consensus 447 Gw~~~Glr~ArK-------l~-PVVasyHTny-----~e-Yl~~y~~g~L~~~llk~l~-----------------~~v~ 495 (794)
T PLN02501 447 NWYHHGKRWTDK-------FN-HVVGVVHTNY-----LE-YIKREKNGALQAFFVKHIN-----------------NWVT 495 (794)
T ss_pred ccHHHHHHHHHH-------cC-CeEEEEeCCc-----HH-HHhHhcchhHHHHHHHHHH-----------------HHHH
Confidence 444 3334443 34 7999999862 21 22222211 111000000 1111
Q ss_pred HHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 292 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 292 ~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
.+ +||.++++|..+. .+ +...+ ...||||+..|.|.... ..+
T Consensus 496 r~--hcD~VIaPS~atq-~L---------------~~~vI-~nVnGVDte~F~P~~r~-------------------~~~ 537 (794)
T PLN02501 496 RA--YCHKVLRLSAATQ-DL---------------PKSVI-CNVHGVNPKFLKIGEKV-------------------AEE 537 (794)
T ss_pred Hh--hCCEEEcCCHHHH-Hh---------------cccce-eecccccccccCCcchh-------------------HHH
Confidence 11 2899999997554 21 12222 22269999988876532 122
Q ss_pred HHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhH
Q 008154 372 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPI 449 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (576)
+.++++ .....++|+||+.+.||++.|++|+..+.. ++++|+|+|+|+ ..++..+.+ .....++ .+.+..+.
T Consensus 538 r~lgi~--~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP-~reeLe~la-~eLgL~V-~FLG~~dd- 611 (794)
T PLN02501 538 RELGQQ--AFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE-DAHEVQRAA-KRLDLNL-NFLKGRDH- 611 (794)
T ss_pred HhcCCc--cccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc-cHHHHHHHH-HHcCCEE-EecCCCCC-
Confidence 455654 223458999999999999999999998865 489999999996 334444433 3344344 45555433
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
...+|+.+|+||+||.+|++|++++||||||+|||+++.+|. +.+.+ +.+|+.+ +|+++++++|.++
T Consensus 612 ~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~----------g~nGll~--~D~EafAeAI~~L 678 (794)
T PLN02501 612 ADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRS----------FPNCLTY--KTSEDFVAKVKEA 678 (794)
T ss_pred HHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEee----------cCCeEec--CCHHHHHHHHHHH
Confidence 336999999999999999999999999999999999999985 44655 6788765 6899999999999
Q ss_pred HHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 008154 530 IRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 530 l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y 565 (576)
+. ++.....+.. ...+||+.+++++++.-
T Consensus 679 Ls----d~~~rl~~~a---~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 679 LA----NEPQPLTPEQ---RYNLSWEAATQRFMEYS 707 (794)
T ss_pred Hh----CchhhhHHHH---HhhCCHHHHHHHHHHhh
Confidence 86 3333222222 34899999999998765
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=243.63 Aligned_cols=340 Identities=22% Similarity=0.214 Sum_probs=225.3
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+. .||.++++..++++|.+.||+|.+++.......... ... .
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~--~~~------------------------~ 50 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLEL--LPS------------------------N 50 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccc--ccc------------------------c
Confidence 5889987642 599999999999999999999999987643321100 000 0
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCC-ccchHHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW-HAGLVPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~-~~~~~~~~l~~~ 225 (576)
............ .+. .........+.++.. +||+||+|.. ...+...+.. +
T Consensus 51 ~~~~~~~~~~~~-------~~~------------~~~~~~~~~~~~~~~--------~~dii~~~~~~~~~~~~~~~~-~ 102 (353)
T cd03811 51 VKLIPVRVLKLK-------SLR------------DLLAILRLRRLLRKE--------KPDVVISHLTTTPNVLALLAA-R 102 (353)
T ss_pred hhhhceeeeecc-------ccc------------chhHHHHHHHHHHhc--------CCCEEEEcCccchhHHHHHHh-h
Confidence 000000000000 000 001112222222222 7999999987 3333332222 1
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
.++|++++.|+......... ... ....+..++.+|.++++|+
T Consensus 103 -------~~~~~i~~~~~~~~~~~~~~---------~~~----------------------~~~~~~~~~~~d~ii~~s~ 144 (353)
T cd03811 103 -------LGTKLIVWEHNSLSLELKRK---------LRL----------------------LLLIRKLYRRADKIVAVSE 144 (353)
T ss_pred -------cCCceEEEEcCcchhhhccc---------hhH----------------------HHHHHhhccccceEEEecc
Confidence 25899999998632110000 000 0245667789999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+.+. ..+..+..++.+||||++...+.+.... .. ..+.+ .+..++
T Consensus 145 ~~~~~~~---------~~~~~~~~~~~vi~~~~~~~~~~~~~~~------------------~~---~~~~~--~~~~~i 192 (353)
T cd03811 145 GVKEDLL---------KLLGIPPDKIEVIYNPIDIEEIRALAEE------------------PL---ELGIP--PDGPVI 192 (353)
T ss_pred chhhhHH---------HhhcCCccccEEecCCcChhhcCcccch------------------hh---hcCCC--CCceEE
Confidence 9887763 2333345789999999998777654321 00 12222 467899
Q ss_pred EEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+++||+.+.||++.+++++..+.+ ++++|+++|.++. .....+.+........+.+.++..+ ...+++.||++|+|
T Consensus 193 ~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~d~~i~p 270 (353)
T cd03811 193 LAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL-REELEALAKELGLADRVHFLGFQSN-PYPYLKAADLFVLS 270 (353)
T ss_pred EEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc-HHHHHHHHHhcCCCccEEEecccCC-HHHHHHhCCEEEeC
Confidence 999999999999999999999976 4899999999853 3333344433222233345555444 45799999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++|||++|+|+|+++.|+..|.+.+ +.+|+++++.|++++++.+..+. ...++++.+.++
T Consensus 271 s~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~ 339 (353)
T cd03811 271 SRYEGFPNVLLEAMALGTPVVATDCPGPREILED----------GENGLLVPVGDEAALAAAALALL-DLLLDPELRERL 339 (353)
T ss_pred cccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcC----------CCceEEECCCCHHHHHHHHHHHH-hccCChHHHHHH
Confidence 9999999999999999999999999999999998 89999999999998865444443 334577777777
Q ss_pred HHHH
Q 008154 544 MRRG 547 (576)
Q Consensus 544 ~~~a 547 (576)
++++
T Consensus 340 ~~~~ 343 (353)
T cd03811 340 AAAA 343 (353)
T ss_pred HHHH
Confidence 7744
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=259.98 Aligned_cols=421 Identities=16% Similarity=0.143 Sum_probs=240.0
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecCCee--
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFGGEQ-- 138 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~-- 138 (576)
...||+|+++..+..+|+.+|.+....+..|..|-+.+... +..+. ...+.|.+.|+..
T Consensus 21 LGNGGLGRLAacfldSlAtl~~p~~GygirY~yG~F~Q~i~-dG~QvE~pd~Wl~~g~pWe~~r~~~~~~V~f~G~v~~~ 99 (713)
T PF00343_consen 21 LGNGGLGRLAACFLDSLATLGIPAYGYGIRYEYGLFKQKIV-DGWQVELPDNWLRYGNPWEIRRPDESYEVKFGGRVEDD 99 (713)
T ss_dssp ESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEE-TTEEEEEEEBTTTTG-TTSEEEGGGEEEEEESEEEE-E
T ss_pred ccCcccchhHHHHHHHHHhCCCCceEEEeeecCCCceeEee-cCCcccCCCCccCCCCceEEecCCceEEEeccceEEec
Confidence 45799999999999999999999999999998875433221 11110 2234444432211
Q ss_pred -------------EEEEEEeeec-----CeEEEEec---C-CCCC-----C----------------CCCCCCCCCCCCC
Q 008154 139 -------------EIAFFHEYRE-----GVDWVFVD---H-PSYH-----R----------------PGNPYGDINGAFG 175 (576)
Q Consensus 139 -------------~~~~~~~~~~-----gv~v~~l~---~-~~~~-----~----------------~~~~y~~~~~~~~ 175 (576)
..-.+..-|. .+...++. . ..|+ + +.-+|+.- ..+.
T Consensus 100 ~~~~~~~~~~~~v~av~yD~pi~Gy~~~~vn~LRLw~a~~~~~fd~~~fn~gdy~~a~~~~~~~e~is~vLYP~d-~~~~ 178 (713)
T PF00343_consen 100 GGRKVRWEDGETVLAVPYDMPIPGYRTKTVNTLRLWSAEPSEEFDLESFNRGDYIKAVEEKNRAENISKVLYPND-STEE 178 (713)
T ss_dssp ETTEEEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEEESSSTTHHHHHTTCHHHHHHHHHHHHGGGTBSS-SS-SSHH
T ss_pred CCCcccccCCeEEEEEecCceeecCCCCceEEEEEeccCCCcccChhhcCCCcHHHHHHHHHHhhceeeecCCCC-cccc
Confidence 1111111111 13344433 0 0010 0 12245431 1122
Q ss_pred chHHHH---HHHHHHHHh-hcccC---C--CCCCCCCCccEEEeCCCccchHHHHHHh-----hccCCCCCCC---CcEE
Q 008154 176 DNQFRY---TLLCYAACE-APLVL---P--LGGFTYGEKCIFLVNDWHAGLVPVLLAS-----KYRPHGVYKD---ARSI 238 (576)
Q Consensus 176 ~~~~r~---~~~~~~~~~-~~~~~---~--~~~~~~~~pDVvH~~~~~~~~~~~~l~~-----~~~~~~~~~~---~~~v 238 (576)
.++.|+ .+++.+.++ ++++. + +..|. ++.+||+||.|++++..-+.+ ....+..+.. ..++
T Consensus 179 Gk~LRLkQqyf~vsa~lqdiir~~~~~~~~~~~~~--~~~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~ 256 (713)
T PF00343_consen 179 GKELRLKQQYFFVSASLQDIIRRFKKSHGDLREFP--DKVVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFA 256 (713)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGHH--HHEEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEE
T ss_pred chhhhhhhHhhhhhhHHHHHHHHHHHhCCChHHCC--cceEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhcee
Confidence 335666 233333322 22222 1 22222 467999999999987433222 2222222222 2789
Q ss_pred EEeecCCCCC--CCChhhhhh-cCC--------Chhhhccccccc----ccccccc--cCCcCccchhHHHHHHhcccee
Q 008154 239 LVIHNLSHQG--VEPAATYKN-LGL--------PSEWYGALEWVF----PTWARTH--ALDTGEAVNVLKGAIVTADRLL 301 (576)
Q Consensus 239 ~t~H~~~~~~--~~~~~~~~~-~~~--------~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~a~~~ad~v~ 301 (576)
||+||+.+.+ .||.++++. ++. ..+++......+ ..+.+.. .......++|..+|++.|..++
T Consensus 257 fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~LAl~~S~~vN 336 (713)
T PF00343_consen 257 FTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDELRRKYPGDEDQIRRLSIIEEGNSKRFRMANLALRGSHSVN 336 (713)
T ss_dssp EEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT-HHHHHHHSSEETSSSCEEEHHHHHHHCESEEE
T ss_pred eeccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHHHHHHhcCcchhhhhcccccccchhhcchhHHHHHhccccc
Confidence 9999998776 788888743 211 011111110000 0111111 1123457999999999999999
Q ss_pred ccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCC---CCccccccCCcCCcccch--------------
Q 008154 302 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPS---SDEHIASHYSIDDLSGKV-------------- 364 (576)
Q Consensus 302 ~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~---~~~~l~~~~~~~~~~~~~-------------- 364 (576)
+||+.+.+-+++.. +.......+.++..|+|||+...|... ...++++++.+.+|..+.
T Consensus 337 GVS~LH~ev~k~~~----f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~ 412 (713)
T PF00343_consen 337 GVSKLHGEVLKQMV----FKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEE 412 (713)
T ss_dssp ESSHHHHHHHHHTT----THHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHH
T ss_pred chHHHHHHHHHHHH----hhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchH
Confidence 99999987654322 233445566789999999999999864 345778888888884111
Q ss_pred --------------HhHHHHHHHcCCCCCCCCCEEEEecccccccCHHH-HHH---HHHhhhc------CCcEEEEEeCC
Q 008154 365 --------------QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRL---AAPEILA------DDIQFVMLGSG 420 (576)
Q Consensus 365 --------------~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~---a~~~L~~------~~~~lii~G~g 420 (576)
...+.+++..++..+++.+.++++.||.+||+..+ ++. -+.+|++ .|++++|+|++
T Consensus 413 ~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKA 492 (713)
T PF00343_consen 413 FQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKA 492 (713)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccC
Confidence 11223344557666789999999999999999999 444 4445543 37999999999
Q ss_pred ChhhHHHHHHHHH------------HhcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceE
Q 008154 421 DPQFESWMRDTEA------------TYKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPV 484 (576)
Q Consensus 421 ~~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvI 484 (576)
+|.+...++.++. .... +++++++|+..+++.++++||||++.|+ .|++|++.|+||.+|.+++
T Consensus 493 hP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~l 572 (713)
T PF00343_consen 493 HPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNL 572 (713)
T ss_dssp -TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEE
T ss_pred CCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEE
Confidence 9887766655542 1122 7899999999999999999999999998 7999999999999999999
Q ss_pred EeCccccccccccccccccCCCCCcceeEeC
Q 008154 485 VHATGGLRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 485 at~~gg~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
+|.+||+.|+.... +.+|.|+|.
T Consensus 573 stlDG~niEi~e~v--------G~eN~fiFG 595 (713)
T PF00343_consen 573 STLDGWNIEIAEAV--------GEENIFIFG 595 (713)
T ss_dssp EESSTCHHHHHHHH---------GGGSEEES
T ss_pred ecccchhHHHHHhc--------CCCcEEEcC
Confidence 99999999997642 136788884
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-28 Score=248.58 Aligned_cols=204 Identities=18% Similarity=0.150 Sum_probs=161.7
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
+++.+++.+|.++++|+.+++.+.+ .+ ..+..+|+||+|.+.|.+..
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~---------~~---~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKK---------YY---GRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHH---------Hh---CCCcEEECCCCCHhhcCcCC---------------------
Confidence 5566789999999999998877631 22 23467999999987765432
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChh
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVP 448 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (576)
.....++++||+.+.||++.+++|+.++ +++|+|+|+|+. .+...+ ....++.+....+.+
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~---~~~l~ivG~g~~-~~~l~~----~~~~~V~~~g~~~~~ 253 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKL---GKRLVVIGDGPE-LDRLRA----KAGPNVTFLGRVSDE 253 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHC---CCcEEEEECChh-HHHHHh----hcCCCEEEecCCCHH
Confidence 1345789999999999999999999988 389999999953 222222 344566554444666
Q ss_pred HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHH
Q 008154 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 449 ~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
.+..+++.||++++||. |++|++++|||+||+|||+++.|+..|.+.+ +.+|++++++|+++++++|..
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~----------~~~G~~~~~~~~~~la~~i~~ 322 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVID----------GVTGILFEEQTVESLAAAVER 322 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeC----------CCCEEEeCCCCHHHHHHHHHH
Confidence 77789999999999999 9999999999999999999999999999988 889999999999999999998
Q ss_pred HHHHhhhCH-HHHHHHHHHHHhhhCCHHHHHHHH
Q 008154 529 AIRTYREHK-SSWEGLMRRGMEKDYTWENAAIQY 561 (576)
Q Consensus 529 ~l~~~~~~~-~~~~~~~~~a~~~~fs~~~~~~~y 561 (576)
++. |+ ....++.++ +++|+|+++.+++
T Consensus 323 l~~----~~~~~~~~~~~~--~~~~~~~~~~~~~ 350 (351)
T cd03804 323 FEK----NEDFDPQAIRAH--AERFSESRFREKI 350 (351)
T ss_pred HHh----CcccCHHHHHHH--HHhcCHHHHHHHh
Confidence 876 44 333444333 3579999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-28 Score=255.36 Aligned_cols=220 Identities=13% Similarity=0.088 Sum_probs=166.7
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
++.+|.++++|+..++.+... .+.......++.+||||++...+.+..
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~------~~~~~~~~~ki~viP~g~~~~~~~~~~-------------------------- 315 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQ------FKKYYNIEPRIYTIPVGSLDELQYPEQ-------------------------- 315 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHH------hhhhcCCCCcEEEEcCCCcccccCccc--------------------------
Confidence 467899999999887776421 001122356799999998644332211
Q ss_pred cCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHH
Q 008154 374 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISH 451 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (576)
. .+...|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. .+...+.+.+......+.+.|+. + ..
T Consensus 316 ---~--r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~-~~~l~~~i~~~~l~~~V~f~G~~-~-~~ 387 (500)
T TIGR02918 316 ---E--RKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE-KQKLQKIINENQAQDYIHLKGHR-N-LS 387 (500)
T ss_pred ---c--cCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh-HHHHHHHHHHcCCCCeEEEcCCC-C-HH
Confidence 0 245689999999999999999999999875 6899999999963 33433444332223444566764 2 44
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc-ccccccccccccccCCCCCcceeEeCC----CC----HHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLP----LS----EESM 522 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~----~d----~~~l 522 (576)
.+++.+|++|+||.+|+||++++||||||+|||+++.+ |.+|++.+ |.+|+++++ +| ++++
T Consensus 388 ~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~----------g~nG~lv~~~~~~~d~~~~~~~l 457 (500)
T TIGR02918 388 EVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED----------NKNGYLIPIDEEEDDEDQIITAL 457 (500)
T ss_pred HHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccC----------CCCEEEEeCCccccchhHHHHHH
Confidence 79999999999999999999999999999999999986 89999998 999999974 33 6667
Q ss_pred HHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHh
Q 008154 523 LTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 523 a~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~ 568 (576)
|++|.+++ +++.+.+|++++ .+++|||++++++|.++++++
T Consensus 458 a~~I~~ll-----~~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 458 AEKIVEYF-----NSNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHh-----ChHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 77776665 344678888887 467999999999999998764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-28 Score=254.59 Aligned_cols=222 Identities=17% Similarity=0.204 Sum_probs=165.3
Q ss_pred hhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhH
Q 008154 288 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 367 (576)
Q Consensus 288 ~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 367 (576)
.+++..++.+|.++++|+...+.+. +.......++.+||||+|.+.|.+....
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~---------~~~~~~~~~v~vipngvd~~~f~~~~~~------------------ 216 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFR---------RLAPEAAGRITAFPNGVDADFFSPDRDY------------------ 216 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHH---------HhCCCCCCCeEEeecccchhhcCCCccc------------------
Confidence 3677888999999999998887653 1222345689999999999888654321
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccccCHHHHH----HHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEE
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIR----LAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 441 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll----~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~ 441 (576)
...++ ++..+|+|+||+.+.||++.++ +++..+.+ ++++|+|+|+|+. ++ .+.+... .++.
T Consensus 217 -----~~~~~--~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~--~~-~~~l~~~--~~V~- 283 (397)
T TIGR03087 217 -----PNPYP--PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS--PA-VRALAAL--PGVT- 283 (397)
T ss_pred -----cCCCC--CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh--HH-HHHhccC--CCeE-
Confidence 00111 3567899999999999999888 44555543 6899999999863 22 2222222 2333
Q ss_pred EccCChhHHHHHHhcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHH
Q 008154 442 WVGFNVPISHRITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEE 520 (576)
Q Consensus 442 ~~~~~~~~~~~ll~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~ 520 (576)
+.|+.++ ...+++.||++|+||. .|++|++++||||||+|||+|+.++. ..... +++|+++. +|++
T Consensus 284 ~~G~v~~-~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~----------~~~g~lv~-~~~~ 350 (397)
T TIGR03087 284 VTGSVAD-VRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDAL----------PGAELLVA-ADPA 350 (397)
T ss_pred EeeecCC-HHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-ccccc----------CCcceEeC-CCHH
Confidence 3344333 4579999999999998 59999999999999999999997642 22222 46788886 7999
Q ss_pred HHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHH
Q 008154 521 SMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 521 ~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~ 566 (576)
+++++|.+++. |++.+.+|++++ +.++|||+++++++.++|+
T Consensus 351 ~la~ai~~ll~----~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 351 DFAAAILALLA----NPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHc----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 99999999875 788888888887 3568999999999999875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-27 Score=244.53 Aligned_cols=219 Identities=15% Similarity=0.168 Sum_probs=173.6
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
+.+.+++.+|.++++|+...+.+. +.++....++.+++||++...+.+...
T Consensus 176 ~~~~~~~~~d~ii~~S~~~~~~l~---------~~~~~~~~ki~vi~~gv~~~~~~~~~~-------------------- 226 (407)
T cd04946 176 LRRYLLSSLDAVFPCSEQGRNYLQ---------KRYPAYKEKIKVSYLGVSDPGIISKPS-------------------- 226 (407)
T ss_pred HHHHHHhcCCEEEECCHHHHHHHH---------HHCCCccccEEEEECCcccccccCCCC--------------------
Confidence 445567899999999999887753 344556678999999999766543311
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcC----CcEEEEEeCCChhhHHHHHHHHHHh-cCceEEEc
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD----DIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWV 443 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~----~~~lii~G~g~~~~~~~~~~~~~~~-~~~~~~~~ 443 (576)
..+.+.++++||+.+.||++.+++|+.++.+. +++++++|+|+. .+...+.+.+.. ..++. +.
T Consensus 227 ----------~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-~~~l~~~~~~~~~~~~V~-f~ 294 (407)
T cd04946 227 ----------KDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-EDTLKELAESKPENISVN-FT 294 (407)
T ss_pred ----------CCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-HHHHHHHHHhcCCCceEE-Ee
Confidence 13568899999999999999999999999763 567888999852 344444443322 23444 45
Q ss_pred cC-ChhHHHHHHh--cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCC-CH
Q 008154 444 GF-NVPISHRITA--GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPL-SE 519 (576)
Q Consensus 444 ~~-~~~~~~~ll~--~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~-d~ 519 (576)
|+ +.+.+..+++ .+|++++||.+|++|++++||||+|+|||+|+.||.+|.+.+ +++|++++++ |+
T Consensus 295 G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~----------~~~G~l~~~~~~~ 364 (407)
T cd04946 295 GELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDN----------GGNGLLLSKDPTP 364 (407)
T ss_pred cCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcC----------CCcEEEeCCCCCH
Confidence 54 5555667776 489999999999999999999999999999999999999998 8899999874 79
Q ss_pred HHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHH
Q 008154 520 ESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYE 562 (576)
Q Consensus 520 ~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~ 562 (576)
++++++|.+++. |++.+.+|++++ +.++|+|+...++|.
T Consensus 365 ~~la~~I~~ll~----~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFID----NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 999999999875 888999998888 457999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-27 Score=236.27 Aligned_cols=218 Identities=17% Similarity=0.155 Sum_probs=160.8
Q ss_pred hHHHH-HHhccceeccCccchhhhccccCCcchhhhhhcc-CCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHh
Q 008154 289 VLKGA-IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSR-KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 366 (576)
Q Consensus 289 ~~~~a-~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~-~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~ 366 (576)
++..+ .+.+|.++++|+...+.+.+ .... ..++.+||||||.+.|.+....
T Consensus 86 ~~~~~~~~~ad~ii~~S~~~~~~l~~----------~g~~~~~~i~vIpNGVd~~~f~~~~~~----------------- 138 (331)
T PHA01630 86 ALYFFRNQPVDEIVVPSQWSKNAFYT----------SGLKIPQPIYVIPHNLNPRMFEYKPKE----------------- 138 (331)
T ss_pred HHHHHhhccCCEEEECCHHHHHHHHH----------cCCCCCCCEEEECCCCCHHHcCCCccc-----------------
Confidence 34444 57899999999998877632 1111 3579999999998877654311
Q ss_pred HHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEE-c
Q 008154 367 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW-V 443 (576)
Q Consensus 367 ~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~-~ 443 (576)
..+.++++++|++.+.||++.|++|++.+.+ ++++++++|++... .. +. .+.+. .
T Consensus 139 ------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~-~~----l~-----~~~~~~~ 196 (331)
T PHA01630 139 ------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD-PR----LF-----GLNGVKT 196 (331)
T ss_pred ------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc-hh----hc-----cccceec
Confidence 0245678888999999999999999999976 58999999976421 11 10 11122 1
Q ss_pred cCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCC-------
Q 008154 444 GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP------- 516 (576)
Q Consensus 444 ~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~------- 516 (576)
..+.+....+|+.||++++||.+|+||++++||||||+|||+|+.||+.|++.+ +.||+++++
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~----------~~ng~lv~~~~~~~~~ 266 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLS----------NLDVYWIKSGRKPKLW 266 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccC----------CCceEEeeeccccccc
Confidence 124456678999999999999999999999999999999999999999999988 666665532
Q ss_pred ------------CCHHHHHHHHHHHHHHhhhCHHHHHHHHH-HH--HhhhCCHHHHHHHHHHHHHH
Q 008154 517 ------------LSEESMLTALRFAIRTYREHKSSWEGLMR-RG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 517 ------------~d~~~la~~i~~~l~~~~~~~~~~~~~~~-~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
.|.+++++++.+++.+. +++.+.+++. ++ .+++|||++++++|.++|++
T Consensus 267 ~~~~~~~G~~v~~~~~~~~~~ii~~l~~~--~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 267 YTNPIHVGYFLDPDIEDAYQKLLEALANW--TPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccCCcccccccCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 26788888888777621 2233444333 33 57899999999999999964
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-26 Score=234.96 Aligned_cols=245 Identities=14% Similarity=0.027 Sum_probs=168.8
Q ss_pred CccEEEeCCCccch--HHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCCh-hhhccccccccccccccc
Q 008154 204 EKCIFLVNDWHAGL--VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPS-EWYGALEWVFPTWARTHA 280 (576)
Q Consensus 204 ~pDVvH~~~~~~~~--~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 280 (576)
+|||||+|...... ....+..+. .++|+|+|.|+... .. ...+... .....
T Consensus 100 ~~DvV~~~~~~~~~~~~~~~~~~~~------~~~p~v~~~h~~~~------~~-~~~~~~~~~~~~~------------- 153 (371)
T PLN02275 100 RPDVFLVQNPPSVPTLAVVKLACWL------RRAKFVIDWHNFGY------TL-LALSLGRSHPLVR------------- 153 (371)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHH------hCCCEEEEcCCccH------HH-HhcccCCCCHHHH-------------
Confidence 89999998754422 122222222 46899999997521 11 1111110 00000
Q ss_pred CCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCc
Q 008154 281 LDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 360 (576)
Q Consensus 281 ~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~ 360 (576)
-...+++..++.||.++++|+.+.+.+.+ ..+. ++.+|+||++ +.|.+....
T Consensus 154 ----~~~~~e~~~~~~ad~ii~~S~~~~~~l~~---------~~g~---~i~vi~n~~~-~~f~~~~~~----------- 205 (371)
T PLN02275 154 ----LYRWYERHYGKMADGHLCVTKAMQHELDQ---------NWGI---RATVLYDQPP-EFFRPASLE----------- 205 (371)
T ss_pred ----HHHHHHHHHHhhCCEEEECCHHHHHHHHH---------hcCC---CeEEECCCCH-HHcCcCCch-----------
Confidence 00135777889999999999998877631 1122 2789999953 556543211
Q ss_pred ccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhh-------------------cCCcEEEEEeCCC
Q 008154 361 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL-------------------ADDIQFVMLGSGD 421 (576)
Q Consensus 361 ~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~-------------------~~~~~lii~G~g~ 421 (576)
..+.. ++..+++++||+.+.||++.+++|+..+. .++++|+|+|+|+
T Consensus 206 -------------~~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~ 271 (371)
T PLN02275 206 -------------IRLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP 271 (371)
T ss_pred -------------hcccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC
Confidence 00111 23457889999999999999999998873 2579999999996
Q ss_pred hhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCEEEeCCC---CCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 422 PQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMPSR---FEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~---~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
..++..+.+++....++.++.++ +.+....+|+.||++|.|+. .|++|++++||||||+|||+++.||..|++.+
T Consensus 272 -~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~ 350 (371)
T PLN02275 272 -QKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKD 350 (371)
T ss_pred -CHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccC
Confidence 34555555554333456665653 56667789999999998642 48999999999999999999999999999998
Q ss_pred ccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 498 FNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 498 ~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
+.+|++++ |+++++++|.++
T Consensus 351 ----------g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 351 ----------GKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred ----------CCCeEEEC--CHHHHHHHHHHh
Confidence 89999996 688888888765
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-25 Score=224.40 Aligned_cols=231 Identities=16% Similarity=0.212 Sum_probs=161.4
Q ss_pred HHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 292 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 292 ~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
..+...+.++++|+.+++.+.. .+.+.. .+|+||+|.+.|.+.... ...++
T Consensus 88 ~~m~~~~~vIavS~~t~~~L~~----------~G~~~~--i~I~~GVD~~~f~p~~~~-----------------~~~~r 138 (335)
T PHA01633 88 KYLLQDVKFIPNSKFSAENLQE----------VGLQVD--LPVFHGINFKIVENAEKL-----------------VPQLK 138 (335)
T ss_pred HHHhcCCEEEeCCHHHHHHHHH----------hCCCCc--eeeeCCCChhhcCccchh-----------------hHHHH
Confidence 3445567999999999987642 112222 357899999888765421 23455
Q ss_pred HHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCCChhhHHHHHHHHHHhcCceEEE--c
Q 008154 372 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGDPQFESWMRDTEATYKDKYRGW--V 443 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~--~ 443 (576)
+.++... ++.++++++||+.++||++.+++|+++|.+ + +++++++|.+ . .+.+ ....++.+. .
T Consensus 139 ~~~~~~~-~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~--~----~~~l--~l~~~V~f~g~~ 209 (335)
T PHA01633 139 QKLDKDF-PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK--Q----FTQL--EVPANVHFVAEF 209 (335)
T ss_pred HHhCcCC-CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--H----HHHc--CCCCcEEEEecC
Confidence 5555321 356889999999999999999999999975 2 3578888742 1 1111 233344433 2
Q ss_pred cC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccc-----ccccc-C--CCCCcceeEe
Q 008154 444 GF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENF-----NPFAR-E--GSGEGTGWSF 514 (576)
Q Consensus 444 ~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~-----~~~~~-~--~~~~~~G~~~ 514 (576)
++ +.+.+..+|+++|++|+||.+|+||++++||||||+|||+++.|+++|+..+- +..+. + +.....||.+
T Consensus 210 G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~ 289 (335)
T PHA01633 210 GHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKI 289 (335)
T ss_pred CCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeee
Confidence 44 34566789999999999999999999999999999999999999999975530 00000 0 0113468899
Q ss_pred CCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHH
Q 008154 515 LPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQ 563 (576)
Q Consensus 515 ~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~ 563 (576)
++.|+++++++|..++.. .+++.+. +..+..+++|+|++++++|++
T Consensus 290 ~~~d~~~la~ai~~~~~~--~~~~~~~-~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 290 HKFQIEDMANAIILAFEL--QDREERS-MKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred cCCCHHHHHHHHHHHHhc--cChhhhh-HHHHHHHHhcCHHHHHHHhhC
Confidence 999999999999998764 2444442 222236789999999999864
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-25 Score=231.19 Aligned_cols=213 Identities=15% Similarity=0.150 Sum_probs=168.3
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
++.+|.++++|+...+.+.. .+.. ..++.+||||++...+.+....
T Consensus 155 ~~~~d~ii~~s~~~~~~l~~---------~~~~-~~~v~~ip~g~~~~~~~~~~~~------------------------ 200 (372)
T cd04949 155 LDKVDGVIVATEQQKQDLQK---------QFGN-YNPIYTIPVGSIDPLKLPAQFK------------------------ 200 (372)
T ss_pred hhhCCEEEEccHHHHHHHHH---------HhCC-CCceEEEcccccChhhcccchh------------------------
Confidence 57899999999988877632 2222 2348999999997665443100
Q ss_pred cCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHH
Q 008154 374 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISH 451 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (576)
+ .+...++++||+.+.||++.+++|+.++.+ ++++|+|+|.|+. .....+.+.+......+.+.++..+ +.
T Consensus 201 ---~--~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~~v~~~g~~~~-~~ 273 (372)
T cd04949 201 ---Q--RKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE-EEKLKELIEELGLEDYVFLKGYTRD-LD 273 (372)
T ss_pred ---h--cCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch-HHHHHHHHHHcCCcceEEEcCCCCC-HH
Confidence 1 245789999999999999999999999875 6899999999963 2333333332222233445665444 55
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc-ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 530 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l 530 (576)
.+++.||++|+||..|++|++++|||++|+|||+++.+ |..+++.+ +.+|++++++|+++++++|..++
T Consensus 274 ~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~----------~~~G~lv~~~d~~~la~~i~~ll 343 (372)
T cd04949 274 EVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIED----------GENGYLVPKGDIEALAEAIIELL 343 (372)
T ss_pred HHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHccc----------CCCceEeCCCcHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999987 78899988 89999999999999999999988
Q ss_pred HHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRRGM--EKDYTWENAAIQY 561 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y 561 (576)
. +++.+.++++++. +++|||++++++|
T Consensus 344 ~----~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 344 N----DPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred c----CHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 5 7888999998883 5799999998864
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-25 Score=235.74 Aligned_cols=298 Identities=16% Similarity=0.144 Sum_probs=199.3
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhh-hhhcCCChhhhcc-cccccccccccccC
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAAT-YKNLGLPSEWYGA-LEWVFPTWARTHAL 281 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 281 (576)
..|+||+|+.|..++|.+++++. ++++++|.+|.+ ||... ++.+......+.. +...+..|.
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~------~~~~i~~f~Hip-----fP~~e~~~~lp~~~~ll~~~l~~D~igF~----- 194 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERG------PDARIGFFLHIP-----FPSSEIFRCLPWREELLRGLLGADLIGFQ----- 194 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChHHHhhCCChHHHHHHHhcCCEEEEC-----
Confidence 45999999999999999988765 678999999998 33332 2333222111111 111111111
Q ss_pred CcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcc
Q 008154 282 DTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 361 (576)
Q Consensus 282 ~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~ 361 (576)
.....+..++.|+.++..+......+. +.....++.++|||||++.|.+....
T Consensus 195 ----t~~~~~~Fl~~~~~~l~~~~~~~~~i~-----------~~g~~~~i~vip~GID~~~f~~~~~~------------ 247 (460)
T cd03788 195 ----TERYARNFLSCCSRLLGLEVTDDGGVE-----------YGGRRVRVGAFPIGIDPDAFRKLAAS------------ 247 (460)
T ss_pred ----CHHHHHHHHHHHHHHcCCcccCCceEE-----------ECCEEEEEEEEeCeEcHHHHHHHhcC------------
Confidence 122344455566666666654321111 11234568999999998887654321
Q ss_pred cchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCCC----hhhHHHHHHH
Q 008154 362 GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQFESWMRDT 431 (576)
Q Consensus 362 ~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g~----~~~~~~~~~~ 431 (576)
...+...++..+.. ++..+|+++||+.+.||++.+++|++++.+ + +++|+++|.+. +...+..+.+
T Consensus 248 --~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l 323 (460)
T cd03788 248 --PEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREV 323 (460)
T ss_pred --chhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHH
Confidence 01122233334443 467899999999999999999999999865 2 36788887532 2233333333
Q ss_pred HH---Hhc--------CceEEEccC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCc----eEEeCcccccccc
Q 008154 432 EA---TYK--------DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVHATGGLRDTV 495 (576)
Q Consensus 432 ~~---~~~--------~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~p----vIat~~gg~~e~i 495 (576)
.+ ..+ ..++.+.+. +.+....+|+.||++|+||..|++|++++||||||+| +|+|+.+|..+..
T Consensus 324 ~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~~ 403 (460)
T cd03788 324 EELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEEL 403 (460)
T ss_pred HHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhhc
Confidence 32 211 124445443 6667779999999999999999999999999999999 9999888877652
Q ss_pred ccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHH
Q 008154 496 ENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQV 564 (576)
Q Consensus 496 ~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~ 564 (576)
.+|++++|.|+++++++|.+++.+ +++++.++++++ ..++|++++.++++++-
T Consensus 404 -------------~~g~lv~p~d~~~la~ai~~~l~~---~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 404 -------------SGALLVNPYDIDEVADAIHRALTM---PLEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred -------------CCCEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 579999999999999999999862 345555565554 34689999999998764
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-23 Score=216.76 Aligned_cols=342 Identities=14% Similarity=0.034 Sum_probs=222.5
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEE
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 144 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (576)
+|||++++.+ .||....+.+++++|.++||+|++++....... ..+
T Consensus 1 ~~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~---~~~------------------------- 46 (357)
T PRK00726 1 MKKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEA---RLV------------------------- 46 (357)
T ss_pred CcEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhh---hcc-------------------------
Confidence 3899999753 588999999999999999999999986431100 000
Q ss_pred eeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 145 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 145 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
...|++++.++.+...... ...- ......+........+.++.. +|||||+|.+.+++...+..
T Consensus 47 -~~~g~~~~~~~~~~~~~~~-~~~~-----l~~~~~~~~~~~~~~~~ik~~--------~pDvv~~~~~~~~~~~~~~~- 110 (357)
T PRK00726 47 -PKAGIEFHFIPSGGLRRKG-SLAN-----LKAPFKLLKGVLQARKILKRF--------KPDVVVGFGGYVSGPGGLAA- 110 (357)
T ss_pred -ccCCCcEEEEeccCcCCCC-hHHH-----HHHHHHHHHHHHHHHHHHHhc--------CCCEEEECCCcchhHHHHHH-
Confidence 0136677776533211100 0000 000111111112223333222 79999999877666544433
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
+. .++|+|++.|+.. + + ...+...+.+|.+++++
T Consensus 111 ~~------~~~p~v~~~~~~~-----~-------~----------------------------~~~r~~~~~~d~ii~~~ 144 (357)
T PRK00726 111 RL------LGIPLVIHEQNAV-----P-------G----------------------------LANKLLARFAKKVATAF 144 (357)
T ss_pred HH------cCCCEEEEcCCCC-----c-------c----------------------------HHHHHHHHHhchheECc
Confidence 33 5689998777421 0 0 02344557889998887
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+... . ..+..++.+++||++.+.+.+... +..++++ ++..+
T Consensus 145 ~~~~------------~---~~~~~~i~vi~n~v~~~~~~~~~~----------------------~~~~~~~--~~~~~ 185 (357)
T PRK00726 145 PGAF------------P---EFFKPKAVVTGNPVREEILALAAP----------------------PARLAGR--EGKPT 185 (357)
T ss_pred hhhh------------h---ccCCCCEEEECCCCChHhhcccch----------------------hhhccCC--CCCeE
Confidence 6321 1 135678999999999765543210 1234544 46678
Q ss_pred EEEecccccccCHHHHH-HHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 385 IGFIGRLDYQKGIDLIR-LAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll-~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
|+++|+....|+...++ +|++++.+.+..++++|+++ .++..+.+ + ...+ +.+.++.. ....+++.||+++.+
T Consensus 186 i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~-v~~~g~~~-~~~~~~~~~d~~i~~ 259 (357)
T PRK00726 186 LLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGIN-AEVVPFID-DMAAAYAAADLVICR 259 (357)
T ss_pred EEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCc-EEEeehHh-hHHHHHHhCCEEEEC
Confidence 89999988888765554 99988865445577889986 34444444 2 4434 44556643 355899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCcccc--------ccccccccccccCCCCCcceeEeCCCC--HHHHHHHHHHHHHHh
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGL--------RDTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRTY 533 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~--------~e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~la~~i~~~l~~~ 533 (576)
+ -+.+++|||++|+|+|++..++. .+.+.+ .++|+++++.| +++++++|.+++.
T Consensus 260 ~----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~----------~~~g~~~~~~~~~~~~l~~~i~~ll~-- 323 (357)
T PRK00726 260 A----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVD----------AGAALLIPQSDLTPEKLAEKLLELLS-- 323 (357)
T ss_pred C----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH----------CCCEEEEEcccCCHHHHHHHHHHHHc--
Confidence 6 26899999999999999876432 245555 67899998877 8999999998875
Q ss_pred hhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 534 ~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
|++.+++|++++ +.+.++.+++++.+.+..
T Consensus 324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 324 --DPERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred --CHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 788888888887 356799999998887764
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-23 Score=221.22 Aligned_cols=290 Identities=16% Similarity=0.158 Sum_probs=195.6
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCCh-hhhhhcCCChhhhcccccccccccccccCCc
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPA-ATYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
-|+|.+||.|..++|.++++.. +.+++.|..|.| ||. +.++.+.....
T Consensus 128 ~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHip-----fP~~e~f~~lp~r~~-------------------- 176 (456)
T TIGR02400 128 GDIVWVHDYHLMLLPAMLRELG------VQNKIGFFLHIP-----FPSSEIYRTLPWRRE-------------------- 176 (456)
T ss_pred CCEEEEecchhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChHHHhhCCcHHH--------------------
Confidence 4899999999999999999876 678999999987 333 33344432222
Q ss_pred CccchhHHHHHHhccceeccCccchhhhccccC--------CcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccC
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEG--------GYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHY 355 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~--------~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~ 355 (576)
...++-.||.|-.-+....+.+.+.-. ..++ .+.....++.++|||||++.|.+....
T Consensus 177 ------il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~--~~~g~~~~v~viP~GID~~~f~~~~~~------ 242 (456)
T TIGR02400 177 ------LLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGV--ESGGRTVRVGAFPIGIDVDRFAEQAKK------ 242 (456)
T ss_pred ------HHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCce--EECCcEEEEEEecCcCCHHHHHHHhcC------
Confidence 223344556665555544433321000 0000 011245578999999999888654311
Q ss_pred CcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCC----ChhhH
Q 008154 356 SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSG----DPQFE 425 (576)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g----~~~~~ 425 (576)
.+.......+++.++ +..+|+++||+++.||++.+++|++++.+ + ++.|+++|.. .+.+.
T Consensus 243 -----~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~ 312 (456)
T TIGR02400 243 -----PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQ 312 (456)
T ss_pred -----hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHH
Confidence 000111223444442 56799999999999999999999999864 2 3668877521 13344
Q ss_pred HHHHHHHHH---hcC--------ceEEEcc-CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCc----eEEeCcc
Q 008154 426 SWMRDTEAT---YKD--------KYRGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVHATG 489 (576)
Q Consensus 426 ~~~~~~~~~---~~~--------~~~~~~~-~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~p----vIat~~g 489 (576)
+..+.+.+. .+. .+..+.+ .+.+.+..+|+.||++|+||..|++|++++||||||+| +|+|+.+
T Consensus 313 ~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~ 392 (456)
T TIGR02400 313 QLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFA 392 (456)
T ss_pred HHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCC
Confidence 444444432 111 1233333 35667779999999999999999999999999999999 9999988
Q ss_pred ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 490 GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 490 g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
|..+.+. +|++++|.|++++|++|.+++.. +++++.+++++. ...+||+...+++|++.+
T Consensus 393 G~~~~l~-------------~gllVnP~d~~~lA~aI~~aL~~---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 393 GAAQELN-------------GALLVNPYDIDGMADAIARALTM---PLEEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred CChHHhC-------------CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 8877662 68999999999999999999873 444555555443 235799999999988654
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-22 Score=204.69 Aligned_cols=332 Identities=15% Similarity=0.052 Sum_probs=209.6
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++.+.+ .||-.+.+..++++|.++||+|++++........ . ..
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~---~--------------------------~~ 45 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR---L--------------------------VP 45 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh---c--------------------------cc
Confidence 36666543 6899999999999999999999999875422100 0 00
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
..+++++.++.+.+.+.. .+ .....+ ........+.++.. +||+||+|....++...+..
T Consensus 46 ~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~i~~~--------~pDvI~~~~~~~~~~~~~~a 108 (350)
T cd03785 46 KAGIPLHTIPVGGLRRKG-SL--------KKLKAPFKLLKGVLQARKILKKF--------KPDVVVGFGGYVSGPVGLAA 108 (350)
T ss_pred ccCCceEEEEecCcCCCC-hH--------HHHHHHHHHHHHHHHHHHHHHhc--------CCCEEEECCCCcchHHHHHH
Confidence 135667766533221110 00 001111 11111222222222 79999999866554433333
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
+. .++|++++.|+.. + . ...+...+.+|.++++
T Consensus 109 -~~------~~~p~v~~~~~~~-----~-----------~------------------------~~~~~~~~~~~~vi~~ 141 (350)
T cd03785 109 -KL------LGIPLVIHEQNAV-----P-----------G------------------------LANRLLARFADRVALS 141 (350)
T ss_pred -HH------hCCCEEEEcCCCC-----c-----------c------------------------HHHHHHHHhhCEEEEc
Confidence 33 4688887665421 0 0 0223345678999999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|+...+. ....++.+++||++.+.+.+.. . ++..+++ ++..
T Consensus 142 s~~~~~~---------------~~~~~~~~i~n~v~~~~~~~~~---------------------~-~~~~~~~--~~~~ 182 (350)
T cd03785 142 FPETAKY---------------FPKDKAVVTGNPVREEILALDR---------------------E-RARLGLR--PGKP 182 (350)
T ss_pred chhhhhc---------------CCCCcEEEECCCCchHHhhhhh---------------------h-HHhcCCC--CCCe
Confidence 8865432 2356889999999976554321 1 4556665 4667
Q ss_pred EEEEecccccccCHH-HHHHHHHhhhcCCcEE-EEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 384 LIGFIGRLDYQKGID-LIRLAAPEILADDIQF-VMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~-~ll~a~~~L~~~~~~l-ii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
++++.|+....|+.. +++++++.+.++++++ +++|++. .++..+.+++. ..++. +.++. +....+|+.||++|
T Consensus 183 ~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--~~~l~~~~~~~-~~~v~-~~g~~-~~~~~~l~~ad~~v 257 (350)
T cd03785 183 TLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--LEEVKKAYEEL-GVNYE-VFPFI-DDMAAAYAAADLVI 257 (350)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--HHHHHHHHhcc-CCCeE-Eeehh-hhHHHHHHhcCEEE
Confidence 787887766667764 5568888887556664 4678873 34444444332 33443 45554 34558999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCccc--------cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHH
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGG--------LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIR 531 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg--------~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~ 531 (576)
.++- +++++|||++|+|+|++..++ ..+.+.+ +++|++++++ |+++++++|.+++.
T Consensus 258 ~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~----------~g~g~~v~~~~~~~~~l~~~i~~ll~ 323 (350)
T cd03785 258 SRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVK----------AGAAVLIPQEELTPERLAAALLELLS 323 (350)
T ss_pred ECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh----------CCCEEEEecCCCCHHHHHHHHHHHhc
Confidence 8762 689999999999999987654 2345555 6799999886 89999999998875
Q ss_pred HhhhCHHHHHHHHHHHH--hhhCCHHHHHH
Q 008154 532 TYREHKSSWEGLMRRGM--EKDYTWENAAI 559 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a~--~~~fs~~~~~~ 559 (576)
|++.++++++++. .+.+..+++++
T Consensus 324 ----~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 324 ----DPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred ----CHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 7888888888773 34566665543
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-21 Score=200.21 Aligned_cols=329 Identities=15% Similarity=0.061 Sum_probs=199.5
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++.+ .||-...+.+++++|.++||+|++++....... .. .
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~---~~--------------------------~ 45 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEK---RL--------------------------V 45 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchh---cc--------------------------c
Confidence 688888653 244444667999999999999999985321100 00 0
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
...|++++.++...+.+. .+. ...... ........+.++.. +|||||+|.+...+...+.
T Consensus 46 ~~~g~~~~~i~~~~~~~~-~~~--------~~l~~~~~~~~~~~~l~~~i~~~--------~pDvVi~~~~~~~~~~~~~ 108 (348)
T TIGR01133 46 PKAGIEFYFIPVGGLRRK-GSF--------RLIKTPLKLLKAVFQARRILKKF--------KPDAVIGFGGYVSGPAGLA 108 (348)
T ss_pred ccCCCceEEEeccCcCCC-ChH--------HHHHHHHHHHHHHHHHHHHHHhc--------CCCEEEEcCCcccHHHHHH
Confidence 113677776653222111 010 111111 11111222332222 7999999976655544443
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
.. . .++|+|++.|+.. + . ...+...+.+|.+++
T Consensus 109 ~~-~------~~~p~v~~~~~~~-----~-----------~------------------------~~~~~~~~~~d~ii~ 141 (348)
T TIGR01133 109 AK-L------LGIPLFHHEQNAV-----P-----------G------------------------LTNKLLSRFAKKVLI 141 (348)
T ss_pred HH-H------cCCCEEEECCCCC-----c-----------c------------------------HHHHHHHHHhCeeEE
Confidence 33 2 4678875433210 0 0 022344578999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+...+.+ +..+|+||++...+.+... ++.++++ ++.
T Consensus 142 ~~~~~~~~~------------------~~~~i~n~v~~~~~~~~~~----------------------~~~~~~~--~~~ 179 (348)
T TIGR01133 142 SFPGAKDHF------------------EAVLVGNPVRQEIRSLPVP----------------------RERFGLR--EGK 179 (348)
T ss_pred CchhHhhcC------------------CceEEcCCcCHHHhcccch----------------------hhhcCCC--CCC
Confidence 998655332 2379999998654433210 1235665 467
Q ss_pred CEEEEecccccccCHH-HHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 383 PLIGFIGRLDYQKGID-LIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~-~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
++|+++|+....|++. .+++|++++.++++++++ +|+++ .+...+.+.+....+++.+. .. ....+|+.||++
T Consensus 180 ~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~~~l~~~~~~~~l~~~v~~~-~~--~~~~~l~~ad~~ 254 (348)
T TIGR01133 180 PTILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--LEKVKNVYQELGIEAIVTFI-DE--NMAAAYAAADLV 254 (348)
T ss_pred eEEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--HHHHHHHHhhCCceEEecCc-cc--CHHHHHHhCCEE
Confidence 8899999887788865 456898888665666644 44442 24333333332112333333 22 345899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCcccc-------ccccccccccccCCCCCcceeEeCCCC--HHHHHHHHHHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGL-------RDTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIR 531 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg~-------~e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~la~~i~~~l~ 531 (576)
|.++ + +++++|||++|+|+|+++.++. .+.+.+ +++|++++++| +++++++|.+++.
T Consensus 255 v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~----------~~~G~~~~~~~~~~~~l~~~i~~ll~ 320 (348)
T TIGR01133 255 ISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED----------LGAGLVIRQKELLPEKLLEALLKLLL 320 (348)
T ss_pred EECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH----------CCCEEEEecccCCHHHHHHHHHHHHc
Confidence 9864 2 6899999999999999987542 245655 78999998876 9999999998875
Q ss_pred HhhhCHHHHHHHHHHHH--hhhCCHHHHH
Q 008154 532 TYREHKSSWEGLMRRGM--EKDYTWENAA 558 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a~--~~~fs~~~~~ 558 (576)
|++.+.+|++++. .+....++++
T Consensus 321 ----~~~~~~~~~~~~~~~~~~~~~~~i~ 345 (348)
T TIGR01133 321 ----DPANLEAMAEAARKLAKPDAAKRIA 345 (348)
T ss_pred ----CHHHHHHHHHHHHhcCCccHHHHHH
Confidence 8888888888763 2344444444
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.8e-22 Score=219.59 Aligned_cols=303 Identities=16% Similarity=0.157 Sum_probs=202.7
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhh-hhhcCCChhhhcc-cccccccccccccCC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAAT-YKNLGLPSEWYGA-LEWVFPTWARTHALD 282 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 282 (576)
-|+|-+||.|..++|.+++++. +.+++.|..|.| ||... ++.+......+.. +...+-.|..
T Consensus 148 ~d~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiP-----FPs~e~fr~lp~r~~il~gll~aDligF~t----- 211 (797)
T PLN03063 148 GDVVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTP-----FPSSEIYKTLPSRSELLRAVLTADLIGFHT----- 211 (797)
T ss_pred CCEEEEecchhhhHHHHHHHhC------CCCcEEEEecCC-----CCCHHHHhhCCCHHHHHHHHhcCCEEEeCC-----
Confidence 3899999999999999999876 789999999998 44333 3544433322221 1122211111
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCccc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 362 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~ 362 (576)
+...+..++.|+.+++++.... .+. +.....++.++|||||++.|.+..... .
T Consensus 212 ----~~y~r~Fl~~~~r~l~~~~~~~-~i~-----------~~gr~~~I~viP~GID~~~f~~~~~~~-----------~ 264 (797)
T PLN03063 212 ----YDFARHFLSACTRILGVEGTHE-GVV-----------DQGKVTRVAVFPIGIDPERFINTCELP-----------E 264 (797)
T ss_pred ----HHHHHHHHHHHHHHhCccccCC-ceE-----------ECCeEEEEEEEecccCHHHHHHHhcCh-----------h
Confidence 2344555566666666543211 111 122345689999999988775432110 0
Q ss_pred chHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CC----cEEEEEeCCC----hhhHHHHHHHH
Q 008154 363 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD----IQFVMLGSGD----PQFESWMRDTE 432 (576)
Q Consensus 363 ~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~----~~lii~G~g~----~~~~~~~~~~~ 432 (576)
.......+++.++ +..+|+++||+++.||++.+++|++++.+ ++ +.|+.++... +.+++..+.+.
T Consensus 265 ~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~ 339 (797)
T PLN03063 265 VKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVH 339 (797)
T ss_pred HHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHH
Confidence 0011122333332 56789999999999999999999999864 33 4455444211 23444444444
Q ss_pred HH---hcCce--------EEEc-cCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCc----eEEeCccccccccc
Q 008154 433 AT---YKDKY--------RGWV-GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVHATGGLRDTVE 496 (576)
Q Consensus 433 ~~---~~~~~--------~~~~-~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~p----vIat~~gg~~e~i~ 496 (576)
+. .+.++ ..+. ..+.+....+|+.||++|+||..|++|++++||||||+| +|.|..+|..+.+
T Consensus 340 ~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l- 418 (797)
T PLN03063 340 ELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL- 418 (797)
T ss_pred HHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh-
Confidence 32 22221 1122 235566778999999999999999999999999999999 9999999988875
Q ss_pred cccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhh
Q 008154 497 NFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 497 ~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+.+|++++|.|++++|++|.+++.. ++++++++.++. ...+++|...++.+++.++++..
T Consensus 419 -----------~~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 419 -----------GAGALLVNPWNITEVSSAIKEALNM---SDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred -----------cCCeEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 3579999999999999999999872 445555554444 45689999999999998887764
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=198.14 Aligned_cols=240 Identities=18% Similarity=0.174 Sum_probs=171.0
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
....+|.+++.|..++..+.. .........+.+.+.++|.+.+.+.... .+...+...+.
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~--------~~~~L~~~d~~~~y~ei~~s~~~~~~~~------------~~~~~~~~~r~ 265 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKA--------TFVSLSNSDITSTYPEIDGSWFTYGQYE------------SHLELRLPVRL 265 (495)
T ss_pred hhhccceEecchhhhhhhhhh--------hhhhcCCCCcceeeccccchhccccccc------------cchhcccccce
Confidence 446778888888877765432 2233444458899999997766642211 00000111222
Q ss_pred HcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc-------CCcEEEEEeCC--C-------hhhHHHHHHHHHH-h
Q 008154 373 ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA-------DDIQFVMLGSG--D-------PQFESWMRDTEAT-Y 435 (576)
Q Consensus 373 ~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-------~~~~lii~G~g--~-------~~~~~~~~~~~~~-~ 435 (576)
..+.. ........+.|+.+.|+++++++|+..+.. ...+++++|+. + ..+.++...+.+. +
T Consensus 266 ~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 266 YRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred eeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 22333 335778889999999999999999998865 25788888832 1 1233444444443 3
Q ss_pred cCceEEE-ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe
Q 008154 436 KDKYRGW-VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 514 (576)
Q Consensus 436 ~~~~~~~-~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~ 514 (576)
.++++.+ ...+......+++.+.+.+.++..|+||++++|||+||+|||+|+.||..|++.+ +.+|+++
T Consensus 344 ~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~----------~~tG~l~ 413 (495)
T KOG0853|consen 344 LGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVH----------GVTGLLI 413 (495)
T ss_pred cCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEc----------CCcceee
Confidence 3455555 4445555567888999998888889999999999999999999999999999999 9999999
Q ss_pred CCCCHH---HHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhh
Q 008154 515 LPLSEE---SMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 515 ~~~d~~---~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
+| +.+ .+|+++.++.. |++.|.+|++++ +.+.|||..+.+++.+......
T Consensus 414 dp-~~e~~~~~a~~~~kl~~----~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 414 DP-GQEAVAELADALLKLRR----DPELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred CC-chHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 99 444 57777777764 999999999998 5678999999998888776543
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.5e-20 Score=194.85 Aligned_cols=234 Identities=13% Similarity=0.080 Sum_probs=158.2
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
+.+..++.+|.++++|+..++.+.+ ++.+.. +.+++|+ +.+.+.+... .....
T Consensus 171 ~~r~~~~~~d~ii~~S~~~~~~l~~----------~g~~~~-i~vi~n~-~~d~~~~~~~---------------~~~~~ 223 (425)
T PRK05749 171 FYRLLFKNIDLVLAQSEEDAERFLA----------LGAKNE-VTVTGNL-KFDIEVPPEL---------------AARAA 223 (425)
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH----------cCCCCC-cEecccc-cccCCCChhh---------------HHHHH
Confidence 4566778899999999998877632 233344 7888885 2222221110 01134
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCce-------
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKY------- 439 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~------- 439 (576)
.+++.++ + +..+++++|+. .|+.+.+++|++.+.+ ++++|+|+|+|+...++..+.+++. ....
T Consensus 224 ~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r~~~l~~~~~~~-gl~~~~~~~~~ 296 (425)
T PRK05749 224 TLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPERFKEVEELLKKA-GLSYVRRSQGE 296 (425)
T ss_pred HHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhhHHHHHHHHHhC-CCcEEEccCCC
Confidence 4566665 3 45778888874 5789999999999865 6899999999853324444444432 2111
Q ss_pred -------EEEccCChhHHHHHHhcCCEEEe-CCCCCCCcHHHHHHHHcCCceEEeCc-cccccccccccccccCCCCCcc
Q 008154 440 -------RGWVGFNVPISHRITAGCDILLM-PSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGT 510 (576)
Q Consensus 440 -------~~~~~~~~~~~~~ll~~~Dv~v~-ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~i~~~~~~~~~~~~~~~ 510 (576)
+.+.+. ...+..+|+.||+++. +|..|++|.+++|||+||+|||++.. ++..|.+... ..+
T Consensus 297 ~~~~~~~v~l~~~-~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~---------~~~ 366 (425)
T PRK05749 297 PPSADTDVLLGDT-MGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL---------LQA 366 (425)
T ss_pred CCCCCCcEEEEec-HHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH---------HHC
Confidence 222222 2356689999999655 67679999999999999999999764 6666766540 146
Q ss_pred eeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 511 GWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 511 G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
|+++.++|+++++++|.+++. |++.+.+|++++.+.--+....++++.+.+...+.
T Consensus 367 g~~~~~~d~~~La~~l~~ll~----~~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 367 GAAIQVEDAEDLAKAVTYLLT----DPDARQAYGEAGVAFLKQNQGALQRTLQLLEPYLP 422 (425)
T ss_pred CCeEEECCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhcc
Confidence 888888899999999999875 88899999988732111113566777777766543
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.5e-21 Score=213.81 Aligned_cols=302 Identities=18% Similarity=0.194 Sum_probs=195.8
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhh-hhhcCCChhhhc-ccccccccccccccCC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAAT-YKNLGLPSEWYG-ALEWVFPTWARTHALD 282 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 282 (576)
-|+|.+||.|..++|.+++++. +..++-|..|.+ ||... ++.+......+. .+...+..|.+
T Consensus 134 ~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~p-----fP~~~~f~~lp~~~~ll~~ll~~Dligf~t----- 197 (726)
T PRK14501 134 GDVVWVHDYQLMLLPAMLRERL------PDARIGFFLHIP-----FPSFEVFRLLPWREEILEGLLGADLIGFHT----- 197 (726)
T ss_pred CCEEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCC-----CCChHHHhhCCChHHHHHHHhcCCeEEeCC-----
Confidence 4899999999999999998875 788999999998 33333 244443222222 12222222211
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCccc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 362 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~ 362 (576)
....+..++.|..+.+.... ...+ .+.....++.++|||||++.|.+..... .
T Consensus 198 ----~~~~r~Fl~~~~~~l~~~~~-~~~~-----------~~~gr~~~v~v~p~GID~~~f~~~~~~~-----------~ 250 (726)
T PRK14501 198 ----YDYVRHFLSSVLRVLGYETE-LGEI-----------RLGGRIVRVDAFPMGIDYDKFHNSAQDP-----------E 250 (726)
T ss_pred ----HHHHHHHHHHHHHHcCCccC-CCeE-----------EECCEEEEEEEEECeEcHHHHHHHhcCc-----------h
Confidence 12333334444444442211 1111 0111234689999999998886542110 0
Q ss_pred chHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCC----ChhhHHHHHHHH
Q 008154 363 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSG----DPQFESWMRDTE 432 (576)
Q Consensus 363 ~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g----~~~~~~~~~~~~ 432 (576)
.......+++.. ++..+|+++||+++.||+..+++|++++.+ + +++|+++|.+ -+.+.+..+.+.
T Consensus 251 ~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~ 325 (726)
T PRK14501 251 VQEEIRRLRQDL-----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREID 325 (726)
T ss_pred HHHHHHHHHHHc-----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHH
Confidence 001112233332 256799999999999999999999999865 3 3789988733 133444444443
Q ss_pred HH---hcC--------ceEEEcc-CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHc-----CCceEEeCcccccccc
Q 008154 433 AT---YKD--------KYRGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY-----GTIPVVHATGGLRDTV 495 (576)
Q Consensus 433 ~~---~~~--------~~~~~~~-~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~-----G~pvIat~~gg~~e~i 495 (576)
+. .++ .++.+.+ .+.+....+|+.||++++||..|++|++++||||| |.||++...|+..++.
T Consensus 326 ~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~ 405 (726)
T PRK14501 326 ELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA 405 (726)
T ss_pred HHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC
Confidence 32 111 1333333 46667779999999999999999999999999999 5577777788777653
Q ss_pred ccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 496 ENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 496 ~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
.|++++|.|++++|++|.+++... ++.+.+.++++ ...+|||+.++++|++.|.++..+
T Consensus 406 --------------~~llv~P~d~~~la~ai~~~l~~~---~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 406 --------------EALLVNPNDIEGIAAAIKRALEMP---EEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred --------------cCeEECCCCHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 388999999999999999998632 22223233333 246899999999999999988543
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.9e-20 Score=190.40 Aligned_cols=219 Identities=10% Similarity=0.075 Sum_probs=149.5
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHc
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 374 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 374 (576)
+.+|.++++|+...+.+.+ .+.+.+++.++.|.++. .|.+... ....++.+
T Consensus 146 ~~ad~i~~~s~~~~~~l~~----------~gi~~~ki~v~G~p~~~-~f~~~~~------------------~~~~~~~~ 196 (380)
T PRK13609 146 REVDRYFVATDHVKKVLVD----------IGVPPEQVVETGIPIRS-SFELKIN------------------PDIIYNKY 196 (380)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCChhHEEEECcccCh-HHcCcCC------------------HHHHHHHc
Confidence 5789999999988776532 23455677777666542 2322111 23467778
Q ss_pred CCCCCCCC-CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHH
Q 008154 375 GLPIRPDC-PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 453 (576)
Q Consensus 375 ~i~~~~~~-~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 453 (576)
+++ ++. .++++.|++...|++..+++++... ++++++++|..++...+..+...+....++. +.++.++ ...+
T Consensus 197 ~l~--~~~~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~-~~g~~~~-~~~l 270 (380)
T PRK13609 197 QLC--PNKKILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALK-VFGYVEN-IDEL 270 (380)
T ss_pred CCC--CCCcEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEE-EEechhh-HHHH
Confidence 887 343 4566678998899999999988653 5789888754333233333333333333444 4466544 4579
Q ss_pred HhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeC-ccccc----cccccccccccCCCCCcceeEeCCCCHHHHHHHHHH
Q 008154 454 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLR----DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 454 l~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~-~gg~~----e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
++.||+++. ++.|++++|||++|+|+|+++ .+|.. +.+. ++|+.+...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~------------~~G~~~~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE------------RKGAAVVIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH------------hCCcEEEECCHHHHHHHHHH
Confidence 999999884 567999999999999999986 45432 1222 24555556789999998888
Q ss_pred HHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHh
Q 008154 529 AIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 529 ~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~ 568 (576)
++. |++.+++|++++ +...++++++++.+.+.++..
T Consensus 335 ll~----~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 335 LLQ----DDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHC----CHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 875 788888888876 455789999999999887654
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.8e-21 Score=175.25 Aligned_cols=165 Identities=25% Similarity=0.315 Sum_probs=132.5
Q ss_pred HHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhh---cCCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEE
Q 008154 367 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL---ADDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGW 442 (576)
Q Consensus 367 ~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~---~~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~ 442 (576)
++.++...+.+ .+.++|+++||+.+.||++.+++|+..+. .+++.++|+|+++. .......+.. ....++.+.
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~i~~~ 78 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY-KKELKNLIEKLNLKENIIFL 78 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH-HHHHHHHHHHTTCGTTEEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc-cccccccccccccccccccc
Confidence 45667777766 67899999999999999999999999986 47999999997752 2333333332 233456555
Q ss_pred ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHH
Q 008154 443 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESM 522 (576)
Q Consensus 443 ~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~l 522 (576)
...+.+....+++.||++++||.+|++|++++|||++|+|||+++.|+..|.+.+ +.+|+++++.|++++
T Consensus 79 ~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~----------~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 79 GYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIIND----------GVNGFLFDPNDIEEL 148 (172)
T ss_dssp ESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGT----------TTSEEEESTTSHHHH
T ss_pred ccccccccccccccceeccccccccccccccccccccccceeeccccCCceeecc----------ccceEEeCCCCHHHH
Confidence 4445566778999999999999999999999999999999999999999999998 889999999999999
Q ss_pred HHHHHHHHHHhhhCHHHHHHHHHHHH
Q 008154 523 LTALRFAIRTYREHKSSWEGLMRRGM 548 (576)
Q Consensus 523 a~~i~~~l~~~~~~~~~~~~~~~~a~ 548 (576)
+++|.+++. +++.+..|++++.
T Consensus 149 ~~~i~~~l~----~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 149 ADAIEKLLN----DPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHC----CHHHHHHHHHHhc
Confidence 999999987 6677888887753
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-18 Score=181.10 Aligned_cols=222 Identities=15% Similarity=0.146 Sum_probs=152.4
Q ss_pred hhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhH
Q 008154 288 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 367 (576)
Q Consensus 288 ~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 367 (576)
.+++.+++.||.|+++|+...+.+.. ...++.+||||+|.+.|.+.....
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~-------------~~~~i~~i~ngvd~~~f~~~~~~~----------------- 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR-------------LNPNVVLVPNGVDYEHFAAARDPP----------------- 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh-------------CCCCEEEcccccCHHHhhcccccC-----------------
Confidence 36788899999999999988765531 226789999999998886543210
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
...+.... .+.++++|+|++.+.++++++.++++. .++++|+|+|.++.. .. ...+. ...++.+....+.
T Consensus 195 ~~~~~~~~----~~~~~i~y~G~l~~~~d~~ll~~la~~--~p~~~~vliG~~~~~-~~-~~~~~--~~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPADLAA----LPRPVIGYYGAIAEWLDLELLEALAKA--RPDWSFVLIGPVDVS-ID-PSALL--RLPNVHYLGPKPY 264 (373)
T ss_pred CChhHHhc----CCCCEEEEEeccccccCHHHHHHHHHH--CCCCEEEEECCCcCc-cC-hhHhc--cCCCEEEeCCCCH
Confidence 00011111 356899999999998888777665543 368999999998321 11 11111 1235544433355
Q ss_pred hHHHHHHhcCCEEEeCCCC-----CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHH
Q 008154 448 PISHRITAGCDILLMPSRF-----EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESM 522 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~-----E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~l 522 (576)
+.+..+++++|++++|+.. +.+|++++||||||+|||+|+.+ +.... ...+++ .++|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~---~~~~~----------~~~~~~-~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP---EVRRY----------EDEVVL-IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcH---HHHhh----------cCcEEE-eCCCHHHH
Confidence 6677899999999999863 36799999999999999999854 44443 333444 45689999
Q ss_pred HHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 008154 523 LTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 523 a~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~ 567 (576)
+++|.+++.. ++++...+ .++ +++.+||++.++++.+..++
T Consensus 331 ~~ai~~~l~~--~~~~~~~~-~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLE--DGPARERR-RLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhc--CCchHHHH-HHH-HHHHCCHHHHHHHHHHHHHh
Confidence 9999998652 12222222 222 67889999999999966543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-19 Score=168.35 Aligned_cols=118 Identities=26% Similarity=0.282 Sum_probs=92.8
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~p 463 (576)
++|++.+.||++.+++++..+.+ ++++++++|.+++...............++.....+ ..+....++++||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 489999999986432221111122333455544433 345555677779999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 514 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~ 514 (576)
|..|++|++++|||++|+|+|+|+.++..|.+.+ +.+|+++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~----------~~~g~~~ 229 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVED----------GLTGLLV 229 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEEC----------CCceEEC
Confidence 9999999999999999999999999999999887 7888864
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.3e-18 Score=160.77 Aligned_cols=296 Identities=15% Similarity=0.119 Sum_probs=201.0
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCc
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
.|||+.-.-+.+.-.|.+.. . .++|++..+|-|. ...+|...+ +.+....+..|++. .+
T Consensus 150 ~Pdi~IDtMGY~fs~p~~r~--l------~~~~V~aYvHYP~----iS~DML~~l------~qrq~s~~l~~~Kl---aY 208 (465)
T KOG1387|consen 150 PPDIFIDTMGYPFSYPIFRR--L------RRIPVVAYVHYPT----ISTDMLKKL------FQRQKSGILVWGKL---AY 208 (465)
T ss_pred CchheEecCCCcchhHHHHH--H------ccCceEEEEeccc----ccHHHHHHH------HhhhhcchhhhHHH---HH
Confidence 79998754343333344433 2 4799999999764 223343222 11111123333332 11
Q ss_pred Cccchh-HHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCccc
Q 008154 284 GEAVNV-LKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 362 (576)
Q Consensus 284 ~~~~~~-~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~ 362 (576)
...|.. ...+-..||.+.+.|.++.+.+. +.++. .++.+|+...+++.
T Consensus 209 ~rlFa~lY~~~G~~ad~vm~NssWT~nHI~---------qiW~~--~~~~iVyPPC~~e~-------------------- 257 (465)
T KOG1387|consen 209 WRLFALLYQSAGSKADIVMTNSSWTNNHIK---------QIWQS--NTCSIVYPPCSTED-------------------- 257 (465)
T ss_pred HHHHHHHHHhccccceEEEecchhhHHHHH---------HHhhc--cceeEEcCCCCHHH--------------------
Confidence 222333 33455689999999999998874 34454 45566766666442
Q ss_pred chHhHHHHHHHcCCCCCCCCCEEEEecccccccCHH-HHHHHHHhhhc------CCcEEEEEeCC-ChhhHHHHHHHHH-
Q 008154 363 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEILA------DDIQFVMLGSG-DPQFESWMRDTEA- 433 (576)
Q Consensus 363 ~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~-~ll~a~~~L~~------~~~~lii~G~g-~~~~~~~~~~~~~- 433 (576)
+++..+- .+.+...++++|.+.|+|++. +-++|+..... .+++|+|+|+- ..++++..+.++.
T Consensus 258 -------lks~~~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~ 329 (465)
T KOG1387|consen 258 -------LKSKFGT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDL 329 (465)
T ss_pred -------HHHHhcc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHH
Confidence 2333332 224668899999999999999 44455544333 47999999985 2345555555543
Q ss_pred --H--hcCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccc-cccccccccccCCCCC
Q 008154 434 --T--YKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR-DTVENFNPFAREGSGE 508 (576)
Q Consensus 434 --~--~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~-e~i~~~~~~~~~~~~~ 508 (576)
. .+.++.+..+.+-+.+..+++.|.+.|++-..|.||++++|+||+|...|+.+.||.. |++.+++ +.
T Consensus 330 a~~L~i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~-------G~ 402 (465)
T KOG1387|consen 330 AEELKIPKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWD-------GE 402 (465)
T ss_pred HHhcCCccceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccC-------Cc
Confidence 2 3456666666665666689999999999999999999999999999999999998877 7777643 35
Q ss_pred cceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHHHHHhhhC
Q 008154 509 GTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 509 ~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
.+|++.+ +.++.|+++.+++. .+.+.+..+.+++. ..+|+-.++-+.+.+.+..++..
T Consensus 403 ~tGFla~--t~~EYaE~iLkIv~---~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 403 TTGFLAP--TDEEYAEAILKIVK---LNYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred cceeecC--ChHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcc
Confidence 6899973 67788999999987 46776777777663 46899999999999988888764
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.9e-18 Score=177.72 Aligned_cols=310 Identities=15% Similarity=0.100 Sum_probs=194.0
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhc-ccccccccccccccCC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYG-ALEWVFPTWARTHALD 282 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 282 (576)
-|+|-+||.|..++|.+++++. +..++-|..|.| ||.. .++.+......+. .+...+..|.+
T Consensus 133 ~d~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiP-----FPs~eifr~LP~r~~ll~glL~aDliGFqt----- 196 (487)
T TIGR02398 133 GATVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTP-----FPSADVFNILPWREQIIGSLLCCDYIGFHI----- 196 (487)
T ss_pred CCEEEEecchhhHHHHHHHHhC------CCCeEEEEeeCC-----CCChHHHhhCCchHHHHHHHhcCCeEEeCC-----
Confidence 4899999999999999999876 678999999998 4433 3355543333322 12222222211
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccc--cCCc-----chhh--hhhccCCceeEecCCCCCCCCCCCCCccccc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTV--EGGY-----GLHE--ILSSRKSVLNGITNGIDITEWNPSSDEHIAS 353 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~--~~~~-----~l~~--~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~ 353 (576)
....+..+..|..+.+............ ..+. ..+. .+.....++.++|.|||++.|.+....
T Consensus 197 ----~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~---- 268 (487)
T TIGR02398 197 ----PRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAA---- 268 (487)
T ss_pred ----HHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcC----
Confidence 1111222222222222111000000000 0000 0000 001223458999999999888543211
Q ss_pred cCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCCC----hh
Q 008154 354 HYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQ 423 (576)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g~----~~ 423 (576)
.+.......+++.++ +..+|++++|++..||+...++|++++.+ + ++.|+++|.+. +.
T Consensus 269 -------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~ 336 (487)
T TIGR02398 269 -------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTI 336 (487)
T ss_pred -------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchH
Confidence 011122345666665 56799999999999999999999999855 3 57999998763 33
Q ss_pred hHHHHHHHHH---HhcC--------ceEEEcc-CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCC----ceEEeC
Q 008154 424 FESWMRDTEA---TYKD--------KYRGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT----IPVVHA 487 (576)
Q Consensus 424 ~~~~~~~~~~---~~~~--------~~~~~~~-~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~----pvIat~ 487 (576)
+.+..+++.+ ..++ .+..+.+ .+.+....+|+.|||++.||..|+++++..|++||+. |+|.|.
T Consensus 337 y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSe 416 (487)
T TIGR02398 337 YDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSE 416 (487)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEec
Confidence 4444444433 2211 1233333 4667777899999999999999999999999999988 999999
Q ss_pred ccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 488 TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 488 ~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
.+|..+.+ ..+++++|.|++++|++|.+++.... +++++..++. ....++...-++.+++..
T Consensus 417 faGaa~~l-------------~~AllVNP~d~~~~A~ai~~AL~m~~---~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l 480 (487)
T TIGR02398 417 FAGAAVEL-------------KGALLTNPYDPVRMDETIYVALAMPK---AEQQARMREMFDAVNYYDVQRWADEFLAAV 480 (487)
T ss_pred cccchhhc-------------CCCEEECCCCHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99888655 35899999999999999999998532 2333222222 235678877777777654
Q ss_pred H
Q 008154 566 E 566 (576)
Q Consensus 566 ~ 566 (576)
.
T Consensus 481 ~ 481 (487)
T TIGR02398 481 S 481 (487)
T ss_pred h
Confidence 3
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.2e-18 Score=176.34 Aligned_cols=215 Identities=14% Similarity=0.108 Sum_probs=151.6
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHc
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 374 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 374 (576)
+.+|.++++|+...+++.. .+.+.+++.+++++++...+.+.. . +..+++.+
T Consensus 149 ~~~d~~~~~s~~~~~~l~~----------~g~~~~ki~v~g~~v~~~f~~~~~-~-----------------~~~~r~~~ 200 (382)
T PLN02605 149 KGVTRCFCPSEEVAKRALK----------RGLEPSQIRVYGLPIRPSFARAVR-P-----------------KDELRREL 200 (382)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCCHHHEEEECcccCHhhccCCC-C-----------------HHHHHHHc
Confidence 5789999999988876542 244567899999999854333222 1 45678899
Q ss_pred CCCCCCCCCEEEEecccccccCHHHHHHHHHhhh------cCCcE-EEEEeCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 375 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL------ADDIQ-FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 375 ~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~------~~~~~-lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
|++ ++.++|+++|+....|++..+++++..+. .++.+ ++++|++. ...+..+... ...++ .+.|+.+
T Consensus 201 gl~--~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~--~~~~v-~~~G~~~ 274 (382)
T PLN02605 201 GMD--EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRD--WKIPV-KVRGFVT 274 (382)
T ss_pred CCC--CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhc--ccCCe-EEEeccc
Confidence 998 57889999999999999999999998753 24565 56777763 2222222221 12233 3455544
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc------cccccccccccccccCCCCCcceeEeCCCCHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT------GGLRDTVENFNPFAREGSGEGTGWSFLPLSEES 521 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~------gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~ 521 (576)
+ +..+|+.||++|.++ .|.+++|||+||+|+|+++. |+. +.+.+ ++.|+.. +|+++
T Consensus 275 ~-~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~----------~g~g~~~--~~~~~ 336 (382)
T PLN02605 275 N-MEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVD----------NGFGAFS--ESPKE 336 (382)
T ss_pred c-HHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHh----------CCceeec--CCHHH
Confidence 4 568999999999865 58899999999999999984 333 33333 4566654 68999
Q ss_pred HHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHH
Q 008154 522 MLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQV 564 (576)
Q Consensus 522 la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~ 564 (576)
++++|.+++. ++++.+++|++++. ....+.+++++.+.+.
T Consensus 337 la~~i~~ll~---~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 337 IARIVAEWFG---DKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHc---CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 9999999986 23888888888763 3467777777776654
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.8e-17 Score=169.92 Aligned_cols=219 Identities=13% Similarity=0.146 Sum_probs=149.3
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHc
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 374 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 374 (576)
+.+|.+++.|+..++.+.. .+.+..++.++.|+++. .|..... +..+++.+
T Consensus 146 ~~~d~~~v~s~~~~~~l~~----------~gi~~~ki~v~GiPv~~-~f~~~~~------------------~~~~~~~~ 196 (391)
T PRK13608 146 PYSTRYYVATKETKQDFID----------VGIDPSTVKVTGIPIDN-KFETPID------------------QKQWLIDN 196 (391)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCCHHHEEEECeecCh-Hhccccc------------------HHHHHHHc
Confidence 5789999999988776532 13355678888777763 3332211 34566778
Q ss_pred CCCCCCCC-CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhh-HHHHHHHHHHhcCceEEEccCChhHHHH
Q 008154 375 GLPIRPDC-PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQF-ESWMRDTEATYKDKYRGWVGFNVPISHR 452 (576)
Q Consensus 375 ~i~~~~~~-~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (576)
+++ ++. .++++.|++...|+++.+++++.+. .+++++++++..++.. ++..+... ...++ .+.|+.++ +..
T Consensus 197 ~l~--~~~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~--~~~~v-~~~G~~~~-~~~ 269 (391)
T PRK13608 197 NLD--PDKQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFK--SNENV-LILGYTKH-MNE 269 (391)
T ss_pred CCC--CCCCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhc--cCCCe-EEEeccch-HHH
Confidence 887 344 4566789999899999999986432 2578887665433222 22222221 12233 35566544 568
Q ss_pred HHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc-cccccc-----cccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 453 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDT-----VENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 453 ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~-----i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
+++.||++|. ++.|+|+.|||++|+|+|+++. +| .|. +.+ .+.|+. .+|+++++++|
T Consensus 270 ~~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pg-qe~~N~~~~~~----------~G~g~~--~~~~~~l~~~i 332 (391)
T PRK13608 270 WMASSQLMIT----KPGGITISEGLARCIPMIFLNPAPG-QELENALYFEE----------KGFGKI--ADTPEEAIKIV 332 (391)
T ss_pred HHHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCC-cchhHHHHHHh----------CCcEEE--eCCHHHHHHHH
Confidence 9999999996 4579999999999999999863 33 222 122 344544 45899999888
Q ss_pred HHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhh
Q 008154 527 RFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
.+++. |++.+.+|++++ ..+.++++++++++.+.+..+.+
T Consensus 333 ~~ll~----~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 333 ASLTN----GNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HHHhc----CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 88875 788888998887 35679999999999998876543
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=6e-20 Score=179.72 Aligned_cols=459 Identities=15% Similarity=0.155 Sum_probs=243.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEecCCCCCCcccchhccccCceeEE-EeecCCeeEEEEEE
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTAADENFTLAKDLGCCMK-ICCFGGEQEIAFFH 144 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 144 (576)
-+..+.+|..+ ++||+.+++..-|+.-.+ .|.+-..++|...+....+-..-+......... -....++..+..++
T Consensus 29 ~lFEvAwEVaN--kVGGIYtVl~sKA~vt~~e~gd~y~l~GP~~e~~~rteve~le~~~~~i~~al~sm~s~G~~~~~Gr 106 (692)
T KOG3742|consen 29 LLFEVAWEVAN--KVGGIYTVLRSKAKVTTEEWGDNYCLIGPYKEHTYRTEVEPLEPENRPIRRALDSMRSRGCKVHYGR 106 (692)
T ss_pred hhhhhHHHHhh--ccCcEEEEEeccCcccHHHhccceEEeccccccchhhcccccCCCchHHHHHHHHHHhCCcEEEecc
Confidence 35667788766 689999999999887666 799999999965443221100000000000000 00112456667788
Q ss_pred eeecC-eEEEEecCCC--CC--C-CCCCCCC--CCCCCCchHHHH-HHHHHHHHhhcccCCCCCCCCCC-ccEEEeCCCc
Q 008154 145 EYREG-VDWVFVDHPS--YH--R-PGNPYGD--INGAFGDNQFRY-TLLCYAACEAPLVLPLGGFTYGE-KCIFLVNDWH 214 (576)
Q Consensus 145 ~~~~g-v~v~~l~~~~--~~--~-~~~~y~~--~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~-pDVvH~~~~~ 214 (576)
|.++| +.|+++|... +. + +++++.. .-.++.|.+..- .+++..+...+..+.. +.... .-|.|.|||.
T Consensus 107 WLIeG~P~viLfdlgs~a~~l~~wK~elwe~c~IgiP~~D~EtNDaiilG~~vawFL~e~~~--~~~~~~~vVahFHEW~ 184 (692)
T KOG3742|consen 107 WLIEGAPKVILFDLGSSAWKLNEWKGELWELCGIGIPHHDIETNDAIILGFMVAWFLGEFRE--LASSYTAVVAHFHEWQ 184 (692)
T ss_pred EEecCCCeEEEEEcccchhhHhhHhHHHHHhcCCCCCcccccccchhhHHHHHHHHHHHHHh--hcccchHHHHHHHHHH
Confidence 88887 7788887322 11 0 1111100 001222333332 2222222222111100 00002 3577999999
Q ss_pred cchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhccccc-cc-ccccccccCCcCccchhHHH
Q 008154 215 AGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEW-VF-PTWARTHALDTGEAVNVLKG 292 (576)
Q Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 292 (576)
++....+.+++. ..+.+|||+|++-. +..++. ...+.+..+.. .+ ...|+ ..-..+.+|++.
T Consensus 185 AGVgL~l~R~rr------l~iaTifTTHATLL----GRyLCA---~~~DfYNnLd~f~vD~EAGk---r~IYHrYC~ERa 248 (692)
T KOG3742|consen 185 AGVGLILCRARR------LDIATIFTTHATLL----GRYLCA---GNVDFYNNLDSFDVDKEAGK---RQIYHRYCLERA 248 (692)
T ss_pred hccchheehhcc------cceEEEeehhHHHH----HHHHhc---ccchhhhchhhcccchhhcc---chhHHHHHHHHH
Confidence 998766666655 67899999998721 000100 00011111000 00 00000 000234689999
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCC-ccccccCCcCCcccchHhHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSD-EHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
|.+.|+.+++||+.++-+.. .++.+.++ .+.|||.++..|...-. ++|.-. .+..-.+..|
T Consensus 249 a~h~AhVFTTVSeITa~EAe---------HlLkRKPD--~itPNGLNV~KFsA~HEFQNLHA~-------~KekIndFVR 310 (692)
T KOG3742|consen 249 AAHTAHVFTTVSEITALEAE---------HLLKRKPD--VITPNGLNVKKFSAVHEFQNLHAQ-------KKEKINDFVR 310 (692)
T ss_pred hhhhhhhhhhHHHHHHHHHH---------HHHhcCCC--eeCCCCcceeehhHHHHHHHHHHH-------HHHHHHHHhh
Confidence 99999999999999886642 24455555 78999999988764321 100000 0000011122
Q ss_pred HH-cCC-C-CCCCCCEEEEecccc-cccCHHHHHHHHHhhhc------CC---cEEEEE-eCCC----------h---hh
Q 008154 372 KE-LGL-P-IRPDCPLIGFIGRLD-YQKGIDLIRLAAPEILA------DD---IQFVML-GSGD----------P---QF 424 (576)
Q Consensus 372 ~~-~~i-~-~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~------~~---~~lii~-G~g~----------~---~~ 424 (576)
.- +|- . +-++.+++..+||++ .+||.|.+|+++++|.- .+ +.|+|. .+.+ . +.
T Consensus 311 GHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesLkgqAv~kqL 390 (692)
T KOG3742|consen 311 GHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESLKGQAVRKQL 390 (692)
T ss_pred hhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhhccHHHHHHH
Confidence 11 121 0 013667888899999 79999999999999853 12 222222 2111 0 00
Q ss_pred ----HHHHHHHHHH-----h------------------------------------------------------------
Q 008154 425 ----ESWMRDTEAT-----Y------------------------------------------------------------ 435 (576)
Q Consensus 425 ----~~~~~~~~~~-----~------------------------------------------------------------ 435 (576)
.+..+.+.++ +
T Consensus 391 ~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~ 470 (692)
T KOG3742|consen 391 WDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSP 470 (692)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCc
Confidence 0000000000 0
Q ss_pred --cCceEEEccC---Chh----HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCC
Q 008154 436 --KDKYRGWVGF---NVP----ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGS 506 (576)
Q Consensus 436 --~~~~~~~~~~---~~~----~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~ 506 (576)
++++++...| ..+ .-.+++.+|.+.|+||+||+||+++.|.-.+|+|-|+|+.+|+.-.+++.- .+
T Consensus 471 ~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi-----~d 545 (692)
T KOG3742|consen 471 SDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHI-----ED 545 (692)
T ss_pred ccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHh-----cC
Confidence 0111111110 000 001345999999999999999999999999999999999999886665511 11
Q ss_pred CCcceeEeCCC---CHHHHHHHHHHHHHHhhhCHHHHHHHHHHH----HhhhCCHHHHHHHHHHHHHHhh
Q 008154 507 GEGTGWSFLPL---SEESMLTALRFAIRTYREHKSSWEGLMRRG----MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 507 ~~~~G~~~~~~---d~~~la~~i~~~l~~~~~~~~~~~~~~~~a----~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
...-|+.+-+. .+++-.+++.+.++.+ ....+++++.++. +..-.+|..+-..|.+.=+.++
T Consensus 546 ~~ayGIYIvDRRfks~deSv~qL~~~m~~F-~~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 546 PQAYGIYIVDRRFKSPDESVQQLASFMYEF-CKQSRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred chhceEEEEecccCChhhHHHHHHHHHHHH-HHHHHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 23467766322 3344444444444433 2345555555544 4557899999999988765554
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=3e-16 Score=162.87 Aligned_cols=217 Identities=15% Similarity=0.054 Sum_probs=140.0
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCC-CCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
+.||.++++|+..++.+.+ .+.+++++.+++||+ |...+...... ...+++.
T Consensus 140 ~~ad~~~~~s~~~~~~l~~----------~G~~~~~I~vign~~~d~~~~~~~~~~-----------------~~~~~~~ 192 (365)
T TIGR00236 140 HIADLHFAPTEQAKDNLLR----------ENVKADSIFVTGNTVIDALLTNVEIAY-----------------SSPVLSE 192 (365)
T ss_pred HHHHhccCCCHHHHHHHHH----------cCCCcccEEEeCChHHHHHHHHHhhcc-----------------chhHHHh
Confidence 4689999999998887642 245677899999996 42211111000 1233444
Q ss_pred cCCCCCCCCCEEEEecccc-cccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHH
Q 008154 374 LGLPIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 450 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (576)
++. ++..++++.+|.+ ..|+++.+++|+.++.+ ++++++++|.+++.......... ....++.+.........
T Consensus 193 ~~~---~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 193 FGE---DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLDF 268 (365)
T ss_pred cCC---CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHHH
Confidence 552 2334444454653 56999999999999864 47889988765432222111111 12234544443333344
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
..+++.+|+++.+| |...+|||++|+|+|++ +.|+..|.+.. + +++++ +.|++++++++.++
T Consensus 269 ~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~----------g-~~~lv-~~d~~~i~~ai~~l 331 (365)
T TIGR00236 269 LNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEA----------G-TNKLV-GTDKENITKAAKRL 331 (365)
T ss_pred HHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhc----------C-ceEEe-CCCHHHHHHHHHHH
Confidence 57899999999887 66789999999999996 67888888765 4 55565 46899999999888
Q ss_pred HHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHH
Q 008154 530 IRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 530 l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~ 563 (576)
+. |++.+.+++++. .....+++++++...+
T Consensus 332 l~----~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 332 LT----DPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred Hh----ChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 75 777777776654 2233455666655544
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.5e-15 Score=151.08 Aligned_cols=184 Identities=11% Similarity=0.014 Sum_probs=124.9
Q ss_pred hhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhH
Q 008154 288 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 367 (576)
Q Consensus 288 ~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 367 (576)
.+++..++.||.++++|+.+++.+.+ .+....++.+++|..+.....+..
T Consensus 115 ~~~~~~~~~aD~iI~~S~~~~~~l~~----------~g~~~~~i~~~~~~~~~~~~~~~~-------------------- 164 (333)
T PRK09814 115 KEEIDMLNLADVLIVHSKKMKDRLVE----------EGLTTDKIIVQGIFDYLNDIELVK-------------------- 164 (333)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCcCceEecccccccccccccc--------------------
Confidence 46778889999999999999887642 122345666666554321111000
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
.+ .....|+|+|++.+.+. +.. ..++++|+|+|+|+... ....++.+....+.
T Consensus 165 --------~~--~~~~~i~yaG~l~k~~~----l~~----~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~~ 217 (333)
T PRK09814 165 --------TP--SFQKKINFAGNLEKSPF----LKN----WSQGIKLTVFGPNPEDL---------ENSANISYKGWFDP 217 (333)
T ss_pred --------cc--cCCceEEEecChhhchH----HHh----cCCCCeEEEECCCcccc---------ccCCCeEEecCCCH
Confidence 01 24568999999995432 111 23578999999996321 12335554444466
Q ss_pred hHHHHHHhcCCEEEeCCCC-----------CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCC
Q 008154 448 PISHRITAGCDILLMPSRF-----------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP 516 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~-----------E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~ 516 (576)
+++..+|+. |+.+.+... -++|....|+||||+|||+++.+++.+++.+ +.+|++++
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~----------~~~G~~v~- 285 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVE----------NGLGFVVD- 285 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHh----------CCceEEeC-
Confidence 677778887 665543311 2678889999999999999999999999998 89999997
Q ss_pred CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 008154 517 LSEESMLTALRFAIRTYREHKSSWEGLMRRG 547 (576)
Q Consensus 517 ~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a 547 (576)
+.+++++++..+ +++.+.+|++++
T Consensus 286 -~~~el~~~l~~~------~~~~~~~m~~n~ 309 (333)
T PRK09814 286 -SLEELPEIIDNI------TEEEYQEMVENV 309 (333)
T ss_pred -CHHHHHHHHHhc------CHHHHHHHHHHH
Confidence 677777777764 346677777776
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.4e-16 Score=170.43 Aligned_cols=300 Identities=14% Similarity=0.137 Sum_probs=191.3
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhc-ccccccccccccccCC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYG-ALEWVFPTWARTHALD 282 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 282 (576)
-|+|-+||.|..++|.+++++. +.+++-|..|.| ||.. .++.+......+. .+...+-.|.+
T Consensus 232 gD~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiP-----FPs~Eifr~LP~r~elL~glL~aDlIGFqT----- 295 (934)
T PLN03064 232 GDVVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTP-----FPSSEIHRTLPSRSELLRSVLAADLVGFHT----- 295 (934)
T ss_pred CCEEEEecchhhHHHHHHHHhC------CCCcEEEEecCC-----CCChHHHhhCCcHHHHHHHHhcCCeEEeCC-----
Confidence 3899999999999999999876 789999999998 4433 3354443332222 12222222211
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCccc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 362 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~ 362 (576)
+...+..+..|..+.+..... ..+. +.....++.+.|-|||...|...... .+
T Consensus 296 ----~~y~rhFl~~c~rlLg~~~~~-~~v~-----------~~Gr~v~V~~~PiGID~~~f~~~~~~-----------~~ 348 (934)
T PLN03064 296 ----YDYARHFVSACTRILGLEGTP-EGVE-----------DQGRLTRVAAFPIGIDSDRFIRALET-----------PQ 348 (934)
T ss_pred ----HHHHHHHHHHHHHHhCccccC-CeEE-----------ECCEEEEEEEEeCEEcHHHHHHHhcC-----------hh
Confidence 122223333333333332110 0110 01112347788999998877543211 01
Q ss_pred chHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CC----cEEEEEe-----CCChhhHHHHHHH
Q 008154 363 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD----IQFVMLG-----SGDPQFESWMRDT 431 (576)
Q Consensus 363 ~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~----~~lii~G-----~g~~~~~~~~~~~ 431 (576)
-....+.+++.++ +..+|+.++|++..||+...++|++++.+ ++ +.|+-+. ++ +.++++.+++
T Consensus 349 v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v-~eY~~l~~~V 422 (934)
T PLN03064 349 VQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDV-PEYQKLTSQV 422 (934)
T ss_pred HHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCc-HHHHHHHHHH
Confidence 1112345555554 56799999999999999999999998654 32 4444333 33 3444444444
Q ss_pred HH---HhcCce--------EE-EccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHc-----CCceEEeCccccccc
Q 008154 432 EA---TYKDKY--------RG-WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY-----GTIPVVHATGGLRDT 494 (576)
Q Consensus 432 ~~---~~~~~~--------~~-~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~-----G~pvIat~~gg~~e~ 494 (576)
.+ ..+.++ .. ....+.+....+|+.||++|+||..|+++++.+|+|+| |.+|+ |..+|..+.
T Consensus 423 ~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLIL-SEfaGaa~~ 501 (934)
T PLN03064 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLIL-SEFAGAAQS 501 (934)
T ss_pred HHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEE-eCCCchHHH
Confidence 33 222221 11 22245666778999999999999999999999999999 55555 777777776
Q ss_pred cccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhh
Q 008154 495 VENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 495 i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
+. ..+++++|.|.+++|++|.+++.. +++++.++.++. ....+++...++.+++....+.
T Consensus 502 L~------------~~AllVNP~D~~~vA~AI~~AL~M---~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 502 LG------------AGAILVNPWNITEVAASIAQALNM---PEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred hC------------CceEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 63 468999999999999999999873 455555555554 3467999999999887776654
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=3e-15 Score=156.27 Aligned_cols=199 Identities=15% Similarity=0.037 Sum_probs=128.0
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
..+.+|.++++|+...+.+. ....++.++.|.+... ..+.. . +..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~-------------~~g~~~~~~G~p~~~~-~~~~~-~-----------------~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYD-------------KLGVPVTFVGHPLADA-IPLLP-D-----------------RAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHH-------------hcCCCeEEECcCHHHh-ccccc-C-----------------hHHHHH
Confidence 35788999999987665432 1112355666555422 11111 1 345677
Q ss_pred HcCCCCCCCCCEE-EEec-ccccc-cCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHh-cCceEEEccCC
Q 008154 373 ELGLPIRPDCPLI-GFIG-RLDYQ-KGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGFN 446 (576)
Q Consensus 373 ~~~i~~~~~~~~i-~~~G-r~~~~-Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~-~~~~~~~~~~~ 446 (576)
.++++ ++.+++ ++.| |.... +.++.++++++.+.+ ++++++++|...+..++..+.+. .. ..++..+ +
T Consensus 179 ~l~~~--~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~v~~~---~ 252 (380)
T PRK00025 179 RLGLD--PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALA-EYAGLEVTLL---D 252 (380)
T ss_pred HcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHh-hcCCCCeEEE---c
Confidence 78886 445554 4555 45443 457899999998865 47899999863232333333333 22 2233322 2
Q ss_pred hhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-----------------CccccccccccccccccCCCCCc
Q 008154 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-----------------ATGGLRDTVENFNPFAREGSGEG 509 (576)
Q Consensus 447 ~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-----------------~~gg~~e~i~~~~~~~~~~~~~~ 509 (576)
. ....+|+.||++|.+| |.+.+|||++|+|+|++ +.+++++.+.+ ....
T Consensus 253 ~-~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~ 318 (380)
T PRK00025 253 G-QKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAG--------RELV 318 (380)
T ss_pred c-cHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcC--------CCcc
Confidence 2 3457999999999987 89999999999999987 34455555544 0123
Q ss_pred ceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 008154 510 TGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG 547 (576)
Q Consensus 510 ~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a 547 (576)
.++..+..|++++++.+.+++. |++.+++|++++
T Consensus 319 ~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~ 352 (380)
T PRK00025 319 PELLQEEATPEKLARALLPLLA----DGARRQALLEGF 352 (380)
T ss_pred hhhcCCCCCHHHHHHHHHHHhc----CHHHHHHHHHHH
Confidence 5566677789999999998875 888888888875
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.2e-15 Score=148.79 Aligned_cols=223 Identities=27% Similarity=0.382 Sum_probs=159.3
Q ss_pred hccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcC
Q 008154 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 375 (576)
Q Consensus 296 ~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 375 (576)
.++.++..|......+. . .....++.+++|+++...+.+.. .+
T Consensus 150 ~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLE----------A-LGVPNKIVVIPNGIDTEKFAPAR--------------------------IG 192 (381)
T ss_pred cccEEEECCHHHHHHHH----------H-hCCCCCceEecCCcCHHHcCccc--------------------------cC
Confidence 35667777765433221 1 11122688999999987665420 11
Q ss_pred CCCCCCCCEEEEecccccccCHHHHHHHHHhhhcC--CcEEEEEeCCChhhHHHHHHHHHHh-cCceEEEccC-ChhHHH
Q 008154 376 LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGF-NVPISH 451 (576)
Q Consensus 376 i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~--~~~lii~G~g~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~ 451 (576)
+..+.....++++||+.+.||++.+++++..+... ++.+.++|.++.........+.... ..++.+ .++ +.+...
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~-~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKF-LGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEE-ecccCHHHHH
Confidence 11111137899999999999999999999999773 3899999999642122222222222 234443 444 324555
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.+++.+|++++||.+|++|++++|||++|+|+|+++.++..|.+.+ +.+|+.+.+.|.+++++++..++.
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~----------~~~g~~~~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVED----------GETGLLVPPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcC----------CCceEecCCCCHHHHHHHHHHHhc
Confidence 6889999999999999999999999999999999999999999987 557887666679999999999876
Q ss_pred HhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhhh
Q 008154 532 TYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+++.+..+++.+ +.+.|+|+++.+++.+++.....
T Consensus 342 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 ----DPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred ----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 445555555422 34789999999999999987664
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.4e-14 Score=148.47 Aligned_cols=199 Identities=15% Similarity=0.062 Sum_probs=126.9
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCC-CCCCCCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
..+.+|.++++|+..++.+.+ .+.+..++.+++|++ |...+.+.... ....+
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~----------~G~~~~kI~vign~v~d~~~~~~~~~~-----------------~~~~~ 190 (363)
T cd03786 138 IDKLSDLHFAPTEEARRNLLQ----------EGEPPERIFVVGNTMIDALLRLLELAK-----------------KELIL 190 (363)
T ss_pred HHHHhhhccCCCHHHHHHHHH----------cCCCcccEEEECchHHHHHHHHHHhhc-----------------cchhh
Confidence 346789999999988876532 245677899999996 43221111100 11223
Q ss_pred HHcCCCCCCCCCEEEEeccccc---ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHh--cCceEEEccCC
Q 008154 372 KELGLPIRPDCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGFN 446 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~---~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~--~~~~~~~~~~~ 446 (576)
+.++++ ++..++++.||... .|+++.+++|++.+.++++.+++.|.+. ......+.+.+.. ..++.+.....
T Consensus 191 ~~~~~~--~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~-~~~~l~~~~~~~~~~~~~v~~~~~~~ 267 (363)
T cd03786 191 ELLGLL--PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR-TRPRIREAGLEFLGHHPNVLLISPLG 267 (363)
T ss_pred hhcccC--CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC-hHHHHHHHHHhhccCCCCEEEECCcC
Confidence 456665 45567888999874 7999999999999865456666666553 2233333333221 23444332223
Q ss_pred hhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc-cccccccccccccccCCCCCcceeEeCCC-CHHHHHH
Q 008154 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSFLPL-SEESMLT 524 (576)
Q Consensus 447 ~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~i~~~~~~~~~~~~~~~G~~~~~~-d~~~la~ 524 (576)
.+....+++.||++|.+|- | ...|||++|+|+|+++. +...+.+. +|+.+..+ |++++++
T Consensus 268 ~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~-------------~g~~~~~~~~~~~i~~ 329 (363)
T cd03786 268 YLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVE-------------SGTNVLVGTDPEAILA 329 (363)
T ss_pred HHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhh-------------eeeEEecCCCHHHHHH
Confidence 3456678999999999983 4 47899999999999875 33445543 34443333 6899999
Q ss_pred HHHHHHHHhhhCHHHHHHH
Q 008154 525 ALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 525 ~i~~~l~~~~~~~~~~~~~ 543 (576)
+|.+++. ++....+|
T Consensus 330 ~i~~ll~----~~~~~~~~ 344 (363)
T cd03786 330 AIEKLLS----DEFAYSLM 344 (363)
T ss_pred HHHHHhc----CchhhhcC
Confidence 8988875 55555444
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-12 Score=124.77 Aligned_cols=379 Identities=13% Similarity=0.092 Sum_probs=225.7
Q ss_pred HHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCCCCCC
Q 008154 84 LGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRP 163 (576)
Q Consensus 84 ~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~ 163 (576)
-+-.+..+|..|++.|.+|.+++ |.+....... .+.++++++-+.++++...
T Consensus 25 RSPRMqYHA~Sla~~gf~VdliG--y~~s~p~e~l--------------------------~~hprI~ih~m~~l~~~~~ 76 (444)
T KOG2941|consen 25 RSPRMQYHALSLAKLGFQVDLIG--YVESIPLEEL--------------------------LNHPRIRIHGMPNLPFLQG 76 (444)
T ss_pred CChHHHHHHHHHHHcCCeEEEEE--ecCCCChHHH--------------------------hcCCceEEEeCCCCcccCC
Confidence 44567899999999999999998 4332111111 1236788888887775441
Q ss_pred --CCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCcc--chHHHHHHhhccCCCCCCCCcEEE
Q 008154 164 --GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA--GLVPVLLASKYRPHGVYKDARSIL 239 (576)
Q Consensus 164 --~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~--~~~~~~l~~~~~~~~~~~~~~~v~ 239 (576)
.-+|.. ..-...+..+..+... ...||++.+.+..+ .++...+.... .+++.+.
T Consensus 77 ~p~~~~l~-----lKvf~Qfl~Ll~aL~~-----------~~~~~~ilvQNPP~iPtliv~~~~~~l------~~~KfiI 134 (444)
T KOG2941|consen 77 GPRVLFLP-----LKVFWQFLSLLWALFV-----------LRPPDIILVQNPPSIPTLIVCVLYSIL------TGAKFII 134 (444)
T ss_pred CchhhhhH-----HHHHHHHHHHHHHHHh-----------ccCCcEEEEeCCCCCchHHHHHHHHHH------hcceEEE
Confidence 111211 0111222222222211 12689999987544 33333333323 5789999
Q ss_pred EeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcc
Q 008154 240 VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG 319 (576)
Q Consensus 240 t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~ 319 (576)
.-|+..+. ..+.-.+|..... -.... -.|+..-+.||.-.+|++.+++++.+
T Consensus 135 DWHNy~Ys----l~l~~~~g~~h~l-V~l~~-----------------~~E~~fgk~a~~nLcVT~AMr~dL~q------ 186 (444)
T KOG2941|consen 135 DWHNYGYS----LQLKLKLGFQHPL-VRLVR-----------------WLEKYFGKLADYNLCVTKAMREDLIQ------ 186 (444)
T ss_pred EehhhHHH----HHHHhhcCCCCch-HHHHH-----------------HHHHHhhcccccchhhHHHHHHHHHH------
Confidence 99987432 1111122211111 11110 14555567899999999999877643
Q ss_pred hhhhhhccCCceeEecCCCCCCCCCCCCC---ccccccCCcC-------CcccchHhHHHHHHHcC---CCCC-CCCCEE
Q 008154 320 LHEILSSRKSVLNGITNGIDITEWNPSSD---EHIASHYSID-------DLSGKVQCKIALQKELG---LPIR-PDCPLI 385 (576)
Q Consensus 320 l~~~~~~~~~~i~vi~nGvd~~~~~~~~~---~~l~~~~~~~-------~~~~~~~~~~~~~~~~~---i~~~-~~~~~i 385 (576)
.++. .+..+++.--. -.+..- -+++.+..+. .-.++......+-++.. .... ....++
T Consensus 187 ---nWgi--~ra~v~YDrPp---s~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pall 258 (444)
T KOG2941|consen 187 ---NWGI--NRAKVLYDRPP---SKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALL 258 (444)
T ss_pred ---hcCC--ceeEEEecCCC---CCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCCeEE
Confidence 2221 12334332111 011111 1122222221 11122222233333332 1111 233566
Q ss_pred EEecccccccCHHHHHHHHHhhh-----c----CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHh
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEIL-----A----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITA 455 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~-----~----~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~ 455 (576)
+++-...+..++..|++|+.... + +.+-.+|-|+|+ ..+...+.+.+..-.++-+...+ ..+....+++
T Consensus 259 vsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP-lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~ 337 (444)
T KOG2941|consen 259 VSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP-LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLA 337 (444)
T ss_pred EecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-hhHHHHHHHHHhcccceeeeecccccccchhHhh
Confidence 77778889999999999998432 1 467888899995 45777777776544444433333 3444557899
Q ss_pred cCCEEE--eCCCCC-CCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 456 GCDILL--MPSRFE-PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 456 ~~Dv~v--~ps~~E-~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
.||+.| ++|..- ..++.++.-.-||+||+|.+...+.|.+++ ++||++|+ |.+++++.+..+...
T Consensus 338 saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh----------~eNGlvF~--Ds~eLa~ql~~lf~~ 405 (444)
T KOG2941|consen 338 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKH----------GENGLVFE--DSEELAEQLQMLFKN 405 (444)
T ss_pred ccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhc----------CCCceEec--cHHHHHHHHHHHHhc
Confidence 999765 566543 678999999999999999999999999999 99999996 799999999999988
Q ss_pred hhhCHHHHHHHHHHHHh-hhCCHHHHHHHH
Q 008154 533 YREHKSSWEGLMRRGME-KDYTWENAAIQY 561 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~~-~~fs~~~~~~~y 561 (576)
+.++.....++.++... +...|+..-++.
T Consensus 406 fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 406 FPDNADELNQLKKNLREEQELRWDESWERT 435 (444)
T ss_pred CCCCHHHHHHHHHhhHHHHhhhHHHHHHHh
Confidence 87788888888777753 456666554443
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.9e-14 Score=122.25 Aligned_cols=129 Identities=26% Similarity=0.367 Sum_probs=90.2
Q ss_pred CCEEEEecccccccCHHHHHH-HHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 382 CPLIGFIGRLDYQKGIDLIRL-AAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~-a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
.++++++|++.+.|+++.+++ +++++.+ ++++|.|+|.+++ + .+.. ...++.. .++.+ ....++++||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~---~-l~~~---~~~~v~~-~g~~~-e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD---E-LKRL---RRPNVRF-HGFVE-ELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS----H-HCCH---HHCTEEE-E-S-H-HHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH---H-HHHh---cCCCEEE-cCCHH-HHHHHHHhCC
Confidence 468999999999999999999 9999975 6899999999864 1 2222 1224443 33333 4668999999
Q ss_pred EEEeCCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 459 ILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 459 v~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
+.+.|+. .|+++++++|||++|+|+|+++. +..++... ...|+.+ .+|+++++++|.+++.
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~----------~~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEE----------DGCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS-------------SEEEE--TT-HHHHHHHHHHHHH
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheee----------cCCeEEE-CCCHHHHHHHHHHHhc
Confidence 9999996 67899999999999999999999 56666654 4677777 7799999999999875
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.44 E-value=4e-11 Score=124.78 Aligned_cols=163 Identities=17% Similarity=0.065 Sum_probs=102.7
Q ss_pred HHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHH
Q 008154 290 LKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIA 369 (576)
Q Consensus 290 ~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 369 (576)
.+...+.+|.+++.++...+.+ .....+..++.|++-.. +...... +..
T Consensus 132 ~r~l~~~~d~v~~~~~~e~~~~-------------~~~g~~~~~vGnPv~~~-~~~~~~~-----------------~~~ 180 (385)
T TIGR00215 132 AKKIEKATDFLLAILPFEKAFY-------------QKKNVPCRFVGHPLLDA-IPLYKPD-----------------RKS 180 (385)
T ss_pred HHHHHHHHhHhhccCCCcHHHH-------------HhcCCCEEEECCchhhh-ccccCCC-----------------HHH
Confidence 3455679999999998765443 21224566788877422 1111001 345
Q ss_pred HHHHcCCCCCCCCCEEEEe-c-cccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHh--cCceEEE
Q 008154 370 LQKELGLPIRPDCPLIGFI-G-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGW 442 (576)
Q Consensus 370 ~~~~~~i~~~~~~~~i~~~-G-r~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~--~~~~~~~ 442 (576)
.++.++++ ++.++|++. | |..+ .|++..+++|++.+.+ +++++++++.... ..+..+.+.+.. ..++..+
T Consensus 181 ~r~~lgl~--~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~ 257 (385)
T TIGR00215 181 AREKLGID--HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI 257 (385)
T ss_pred HHHHcCCC--CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE
Confidence 67778886 456666554 3 7776 7999999999999865 4778877554322 222333333332 2344333
Q ss_pred ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-Ccccccccc
Q 008154 443 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTV 495 (576)
Q Consensus 443 ~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i 495 (576)
.+ + ...+|+.||++|.+| |++.+|||++|+|+|.+ ..++++-++
T Consensus 258 ~~-~---~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~ 302 (385)
T TIGR00215 258 DG-D---ARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLI 302 (385)
T ss_pred Cc-h---HHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 22 2 336899999999998 88889999999999887 344444433
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.3e-11 Score=124.39 Aligned_cols=296 Identities=14% Similarity=0.070 Sum_probs=185.3
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 284 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (576)
-|+|-+||.|..++|.+++++. +..++-|..|.|. .+.+.++.+......+.
T Consensus 124 ~D~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiPF----Ps~eifr~LP~r~eil~------------------ 175 (474)
T PRK10117 124 DDIIWIHDYHLLPFASELRKRG------VNNRIGFFLHIPF----PTPEIFNALPPHDELLE------------------ 175 (474)
T ss_pred CCEEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCCC----CChHHHhhCCChHHHHH------------------
Confidence 4899999999999999999876 7789999999983 22333354443322221
Q ss_pred ccchhHHHHHHhccceeccCccchhhhccc---cCC----cchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCc
Q 008154 285 EAVNVLKGAIVTADRLLTVSKGYSWEITTV---EGG----YGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSI 357 (576)
Q Consensus 285 ~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~---~~~----~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~ 357 (576)
++-.||.|-+-+..+.+.+.+. ..+ .+..-.......++.+.|-|||.+.|......
T Consensus 176 --------glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~-------- 239 (474)
T PRK10117 176 --------QLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG-------- 239 (474)
T ss_pred --------HHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc--------
Confidence 2223333333333322221110 000 00000001123358889999998776432211
Q ss_pred CCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCC----hhhHHH
Q 008154 358 DDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGD----PQFESW 427 (576)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~----~~~~~~ 427 (576)
........+++.++ +..+|+.+.|++.-||+..=++|++++.+ .++.|+-++... +.+.+.
T Consensus 240 ----~~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l 310 (474)
T PRK10117 240 ----PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDI 310 (474)
T ss_pred ----hHHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHH
Confidence 01111334555543 46788899999999999999999999875 267787776432 334444
Q ss_pred HHHHHH---HhcCc--------eE-EEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCC-----ceEEeCccc
Q 008154 428 MRDTEA---TYKDK--------YR-GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-----IPVVHATGG 490 (576)
Q Consensus 428 ~~~~~~---~~~~~--------~~-~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~-----pvIat~~gg 490 (576)
.+++.+ ..+++ +. ...+++.+....+|+.|||++.+|..+++.++..|+.||-. +.|.|...|
T Consensus 311 ~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAG 390 (474)
T PRK10117 311 RHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG 390 (474)
T ss_pred HHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccc
Confidence 444433 22211 11 12234566666899999999999999999999999999954 255566666
Q ss_pred cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHh
Q 008154 491 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 491 ~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~ 568 (576)
..+.+. ..++++|.|.+++|++|.+++... ++++.+..+.. ....++...-++.+++.+..+
T Consensus 391 aA~~L~-------------~AllVNP~d~~~~A~Ai~~AL~Mp---~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~ 454 (474)
T PRK10117 391 AANELT-------------SALIVNPYDRDEVAAALDRALTMP---LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (474)
T ss_pred hHHHhC-------------CCeEECCCCHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Confidence 666553 377889999999999999999853 33333333322 235678888888888877765
Q ss_pred h
Q 008154 569 S 569 (576)
Q Consensus 569 ~ 569 (576)
.
T Consensus 455 ~ 455 (474)
T PRK10117 455 V 455 (474)
T ss_pred h
Confidence 3
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-11 Score=131.65 Aligned_cols=162 Identities=13% Similarity=0.129 Sum_probs=130.0
Q ss_pred CCEEEEec--ccccccCHHHHHHHHHhhhc--CCcEEEEEeCCCh-hhHHHHHHH-HHHhcC------------------
Q 008154 382 CPLIGFIG--RLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP-QFESWMRDT-EATYKD------------------ 437 (576)
Q Consensus 382 ~~~i~~~G--r~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~-~~~~~~~~~-~~~~~~------------------ 437 (576)
...+++++ |+ +.|.++.+|+|+.++.. ++++|.+.|.+.+ .....++.+ .+....
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 397 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQP 397 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhh
Confidence 34677777 99 99999999999999854 7999999998853 233333322 211001
Q ss_pred -----------ceEEEccCCh-hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCC
Q 008154 438 -----------KYRGWVGFNV-PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREG 505 (576)
Q Consensus 438 -----------~~~~~~~~~~-~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~ 505 (576)
..+.+.++.. ..+...+..+.++|.+|..|+++ +.+||++.|+|+| .-|..+.|.+
T Consensus 398 ~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d-------- 465 (519)
T TIGR03713 398 ILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEH-------- 465 (519)
T ss_pred cccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEc--------
Confidence 3566777755 24458999999999999999999 9999999999999 4456899998
Q ss_pred CCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHH
Q 008154 506 SGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQV 564 (576)
Q Consensus 506 ~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~ 564 (576)
++||+++ +|..++++++...+. +++.|.++...+. +++||-+++++++.++
T Consensus 466 --~~NG~li--~d~~~l~~al~~~L~----~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 466 --NKNGYII--DDISELLKALDYYLD----NLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred --CCCcEEe--CCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 9999999 689999999988876 8899999999884 5799999999998775
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.9e-11 Score=126.36 Aligned_cols=290 Identities=16% Similarity=0.170 Sum_probs=155.3
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcccccccccccccccCC
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGALEWVFPTWARTHALD 282 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (576)
.-|+|-+||.|..++|.+++++. +++++.|..|+| ||.. .++.+......+
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~e~fr~lP~r~eiL----------------- 192 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERG------PDARIGFFLHIP-----FPSSEIFRCLPWREEIL----------------- 192 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S---------HHHHTTSTTHHHHH-----------------
T ss_pred CCCEEEEeCCcHHHHHHHHHhhc------CCceEeeEEecC-----CCCHHHHhhCCcHHHHH-----------------
Confidence 45899999999999999999876 789999999998 4433 335444322222
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccccCCcchhhh-------------hhccCCceeEecCCCCCCCCCCCCCc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEI-------------LSSRKSVLNGITNGIDITEWNPSSDE 349 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~-------------~~~~~~~i~vi~nGvd~~~~~~~~~~ 349 (576)
.++-.||.|-+-+..+.+...+. .... +.....++.+.|-|||.+.+......
T Consensus 193 ---------~glL~aDlIgFqt~~~~~nFl~~-----~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~ 258 (474)
T PF00982_consen 193 ---------RGLLGADLIGFQTFEYARNFLSC-----CKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS 258 (474)
T ss_dssp ---------HHHTTSSEEEESSHHHHHHHHHH-----HHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-
T ss_pred ---------HHhhcCCEEEEecHHHHHHHHHH-----HHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC
Confidence 22334454444444433322110 0011 11123457888889987665321100
Q ss_pred cccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCC--
Q 008154 350 HIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGD-- 421 (576)
Q Consensus 350 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~-- 421 (576)
.+-......+++.++ .+..+|+.+.|++..||+..=++|++++.+ .++.|+-++...
T Consensus 259 -----------~~v~~~~~~l~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~ 323 (474)
T PF00982_consen 259 -----------PEVQERAEELREKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSRE 323 (474)
T ss_dssp -----------S---HHHHHHHHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-ST
T ss_pred -----------hHHHHHHHHHHHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCc
Confidence 000111344555553 234789999999999999999999999865 368888777531
Q ss_pred --hhhHHHHHHHHH-------Hhc-Cc---eEEE-ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCc----e
Q 008154 422 --PQFESWMRDTEA-------TYK-DK---YRGW-VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----P 483 (576)
Q Consensus 422 --~~~~~~~~~~~~-------~~~-~~---~~~~-~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~p----v 483 (576)
+.+.+..+++.+ .+. .. +..+ .+.+.+....+|+.||+++.+|..++..++..|+.+|... +
T Consensus 324 ~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvL 403 (474)
T PF00982_consen 324 DVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVL 403 (474)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EE
T ss_pred cchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCce
Confidence 223344444433 221 11 2222 2356677778999999999999999999999999998544 5
Q ss_pred EEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHH
Q 008154 484 VVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQY 561 (576)
Q Consensus 484 Iat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y 561 (576)
|.|...|..+.+.+ ..++++|-|.+++|++|.+++... ++++....++. ....++...-++.+
T Consensus 404 iLSefaGaa~~L~~------------~al~VNP~d~~~~A~ai~~AL~M~---~~Er~~r~~~~~~~v~~~~~~~W~~~~ 468 (474)
T PF00982_consen 404 ILSEFAGAAEQLSE------------AALLVNPWDIEEVADAIHEALTMP---PEERKERHARLREYVREHDVQWWAESF 468 (474)
T ss_dssp EEETTBGGGGT-TT------------S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHT-HHHHHHHH
T ss_pred EeeccCCHHHHcCC------------ccEEECCCChHHHHHHHHHHHcCC---HHHHHHHHHHHHHHhHhCCHHHHHHHH
Confidence 55666666666643 348899999999999999999854 33333332222 23467777777777
Q ss_pred HHHH
Q 008154 562 EQVF 565 (576)
Q Consensus 562 ~~~y 565 (576)
++-.
T Consensus 469 l~~L 472 (474)
T PF00982_consen 469 LRDL 472 (474)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-11 Score=113.54 Aligned_cols=171 Identities=23% Similarity=0.227 Sum_probs=87.0
Q ss_pred ccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEE
Q 008154 74 EAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWV 153 (576)
Q Consensus 74 e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 153 (576)
.+++ ..||+++++.+++++|+++||+|+++++........ .....
T Consensus 6 ~~~~--~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~---------------------------------~~~~~ 50 (177)
T PF13439_consen 6 IFLP--NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEE---------------------------------ELVKI 50 (177)
T ss_dssp C-TT--SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SS---------------------------------TEEEE
T ss_pred ecCC--CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchh---------------------------------hccce
Confidence 3445 379999999999999999999999998765432110 00000
Q ss_pred EecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCC
Q 008154 154 FVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYK 233 (576)
Q Consensus 154 ~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~ 233 (576)
....+.... ....+.........+.++.. +|||||+|.............
T Consensus 51 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~i~~~--------~~DiVh~~~~~~~~~~~~~~~--------- 100 (177)
T PF13439_consen 51 FVKIPYPIR-------------KRFLRSFFFMRRLRRLIKKE--------KPDIVHIHGPPAFWIALLACR--------- 100 (177)
T ss_dssp ---TT-SST-------------SS--HHHHHHHHHHHHHHHH--------T-SEEECCTTHCCCHHHHHHH---------
T ss_pred eeeeecccc-------------cccchhHHHHHHHHHHHHHc--------CCCeEEecccchhHHHHHhcc---------
Confidence 000000000 00111111222333333323 799999998766554433332
Q ss_pred CCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhcc
Q 008154 234 DARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITT 313 (576)
Q Consensus 234 ~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~ 313 (576)
++|+|+|.|+.... .............+. ....+...+.+|.++++|+.+++++.
T Consensus 101 ~~~~v~~~H~~~~~----~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ii~vS~~~~~~l~- 155 (177)
T PF13439_consen 101 KVPIVYTIHGPYFE----RRFLKSKLSPYSYLN--------------------FRIERKLYKKADRIIAVSESTKDELI- 155 (177)
T ss_dssp CSCEEEEE-HHH------HHTTTTSCCCHHHHH--------------------HCTTHHHHCCSSEEEESSHHHHHHHH-
T ss_pred CCCEEEEeCCCccc----ccccccccchhhhhh--------------------hhhhhhHHhcCCEEEEECHHHHHHHH-
Confidence 48999999986321 000000000000000 11233446789999999999998864
Q ss_pred ccCCcchhhhhhccCCceeEecCCCCCCCC
Q 008154 314 VEGGYGLHEILSSRKSVLNGITNGIDITEW 343 (576)
Q Consensus 314 ~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~ 343 (576)
+ ++.++.++.+||||||++.|
T Consensus 156 --------~-~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 156 --------K-FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp --------H-HT--SS-EEE----B-CCCH
T ss_pred --------H-hCCcccCCEEEECCccHHHc
Confidence 3 56677899999999998876
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.7e-12 Score=114.34 Aligned_cols=160 Identities=21% Similarity=0.206 Sum_probs=85.5
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCCCC
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYH 161 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~ 161 (576)
||+++++.+++++|+++||+|+++++....... +....+++++.++.+...
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~ 51 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDD-----------------------------EEEEDGVRVHRLPLPRRP 51 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG------------------------------SEEETTEEEEEE--S-SS
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCccc-----------------------------ccccCCceEEeccCCccc
Confidence 899999999999999999999999976543210 112367888888643321
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEe
Q 008154 162 RPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVI 241 (576)
Q Consensus 162 ~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~ 241 (576)
. ... ....+ ....+.+... ..+|||||+|.+.+.++..+++.. .++|+|+|+
T Consensus 52 ~---~~~--------~~~~~----~~~~~~l~~~------~~~~Dvv~~~~~~~~~~~~~~~~~-------~~~p~v~~~ 103 (160)
T PF13579_consen 52 W---PLR--------LLRFL----RRLRRLLAAR------RERPDVVHAHSPTAGLVAALARRR-------RGIPLVVTV 103 (160)
T ss_dssp S---GGG--------HCCHH----HHHHHHCHHC------T---SEEEEEHHHHHHHHHHHHHH-------HT--EEEE-
T ss_pred h---hhh--------hHHHH----HHHHHHHhhh------ccCCeEEEecccchhHHHHHHHHc-------cCCcEEEEE
Confidence 1 110 00011 1222222001 127999999997766666555522 469999999
Q ss_pred ecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchh
Q 008154 242 HNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLH 321 (576)
Q Consensus 242 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~ 321 (576)
|+...... .+.....+ ..+++..++.||.++++|+..++.+.
T Consensus 104 h~~~~~~~--------~~~~~~~~---------------------~~~~~~~~~~ad~vi~~S~~~~~~l~--------- 145 (160)
T PF13579_consen 104 HGTLFRRG--------SRWKRRLY---------------------RWLERRLLRRADRVIVVSEAMRRYLR--------- 145 (160)
T ss_dssp SS-T--------------HHHHHH---------------------HHHHHHHHHH-SEEEESSHHHHHHHH---------
T ss_pred CCCchhhc--------cchhhHHH---------------------HHHHHHHHhcCCEEEECCHHHHHHHH---------
Confidence 97531110 00000111 13677889999999999999998864
Q ss_pred hhhhccCCceeEecCC
Q 008154 322 EILSSRKSVLNGITNG 337 (576)
Q Consensus 322 ~~~~~~~~~i~vi~nG 337 (576)
+ ++.+.+++.+||||
T Consensus 146 ~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 146 R-YGVPPDRIHVIPNG 160 (160)
T ss_dssp H-H---GGGEEE----
T ss_pred H-hCCCCCcEEEeCcC
Confidence 3 46678899999998
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-09 Score=113.49 Aligned_cols=296 Identities=16% Similarity=0.170 Sum_probs=182.3
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 284 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (576)
=|+|-+||.|..++|..++.+. +..++.|..|.|. .+.++++.+......+.
T Consensus 148 gDiIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHiPf----PssEvfr~lP~r~eIl~------------------ 199 (486)
T COG0380 148 GDIIWVHDYHLLLVPQMLRERI------PDAKIGFFLHIPF----PSSEVFRCLPWREEILE------------------ 199 (486)
T ss_pred CCEEEEEechhhhhHHHHHHhC------CCceEEEEEeCCC----CCHHHHhhCchHHHHHH------------------
Confidence 3999999999999999999887 6789999999983 23334454443222221
Q ss_pred ccchhHHHHHHhccceeccCccchhhhccc---cCC----cch-hhhhhccCCceeEecCCCCCCCCCCCCCccccccCC
Q 008154 285 EAVNVLKGAIVTADRLLTVSKGYSWEITTV---EGG----YGL-HEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYS 356 (576)
Q Consensus 285 ~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~---~~~----~~l-~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~ 356 (576)
++-.||.|-+-++.+++..... ..+ .+. ++.......++...|-|||+..|.......
T Consensus 200 --------gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~------ 265 (486)
T COG0380 200 --------GLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSP------ 265 (486)
T ss_pred --------HhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCC------
Confidence 2233444444433333221100 000 000 000112345688999999988775433210
Q ss_pred cCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCC----hhhHH
Q 008154 357 IDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGD----PQFES 426 (576)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~----~~~~~ 426 (576)
.-+.....+++.++ .+..+|+.+-|++.-||+..=+.|+++|.. .++.++-++... +.+..
T Consensus 266 -----~v~~~~~el~~~~~----~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~ 336 (486)
T COG0380 266 -----SVQEKVLELKAELG----RNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQA 336 (486)
T ss_pred -----chhhHHHHHHHHhc----CCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHH
Confidence 00011233344433 236788889999999999999999999975 267788777653 22223
Q ss_pred HHHHHHH---HhcC--------ceE-EEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHc----CCceEEeCccc
Q 008154 427 WMRDTEA---TYKD--------KYR-GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY----GTIPVVHATGG 490 (576)
Q Consensus 427 ~~~~~~~---~~~~--------~~~-~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~----G~pvIat~~gg 490 (576)
....+.+ +.++ -+. +....+.++...++..+|+++.+|..|++.++..|+.|| +.+.|-|...|
T Consensus 337 ~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaG 416 (486)
T COG0380 337 LRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAG 416 (486)
T ss_pred HHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEecccc
Confidence 3333332 1111 111 223345666778999999999999999999999999887 23455555555
Q ss_pred cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHHHHH
Q 008154 491 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 491 ~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~~ 567 (576)
....+. ..++++|.|.+++|++|.++|... ++++++..+..+ ...++..+.++.+++....
T Consensus 417 aa~~L~-------------~AliVNP~d~~~va~ai~~AL~m~---~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 417 AASELR-------------DALIVNPWDTKEVADAIKRALTMS---LEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred chhhhc-------------cCEeECCCChHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 555443 278899999999999999999843 333333333221 3467888888887766554
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.8e-10 Score=123.87 Aligned_cols=307 Identities=15% Similarity=0.127 Sum_probs=180.2
Q ss_pred cEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcc-cccccccccccccCCc
Q 008154 206 CIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGA-LEWVFPTWARTHALDT 283 (576)
Q Consensus 206 DVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 283 (576)
|+|-+||.|..++|.+++++. +.+++-|..|.| ||.. .++.+......+.. +...+-.|.+
T Consensus 203 d~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~eifr~LP~r~eiL~glL~aDlIGFht------ 265 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSP-----FPSSEIYKTLPIREELLRALLNSDLIGFHT------ 265 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhC------CCCcEEEEecCC-----CCChHHHhhCCcHHHHHHHHhcCCeEEecC------
Confidence 899999999999999998876 789999999998 4433 33555433332221 1112211111
Q ss_pred CccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccc
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 363 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~ 363 (576)
+...+..+..|..+.+.......-. .++ .+.....++.+.|-|||...|...... .+.
T Consensus 266 ---~~yar~Fl~~~~r~lgl~~~~~~g~------~~~--~~~Gr~v~v~~~PigId~~~~~~~~~~-----------~~~ 323 (854)
T PLN02205 266 ---FDYARHFLSCCSRMLGLSYESKRGY------IGL--EYYGRTVSIKILPVGIHMGQLQSVLSL-----------PET 323 (854)
T ss_pred ---HHHHHHHHHHHHHHhCCcccCCCcc------eeE--EECCcEEEEEEEeCeEcHHHHHHHhcC-----------hhH
Confidence 1122222223333222211100000 000 011134457889999998766432211 011
Q ss_pred hHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCCC----hhhHHHHHHHHH
Q 008154 364 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQFESWMRDTEA 433 (576)
Q Consensus 364 ~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g~----~~~~~~~~~~~~ 433 (576)
....+.+++.++- ++..+|+.+.|++.-||+..=++|++++.+ + ++.|+-+.... +.+.+...++.+
T Consensus 324 ~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 324 EAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred HHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 1112344554431 256789999999999999999999999865 2 56777766432 234444444432
Q ss_pred ---HhcC--------ceEEE-ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCC-------------------c
Q 008154 434 ---TYKD--------KYRGW-VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-------------------I 482 (576)
Q Consensus 434 ---~~~~--------~~~~~-~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~-------------------p 482 (576)
+.+. -+..+ .+++.++..++|+.||+++.+|..+++.++..|+.+|.. .
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 2111 12222 334666667899999999999999999999999998743 2
Q ss_pred eEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHH
Q 008154 483 PVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYE 562 (576)
Q Consensus 483 vIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~ 562 (576)
.|.|...|....+. ..+.++|.|.+++|++|.+++....+++..+.+...+ ....++....++.++
T Consensus 481 LiLSEfaGaa~~L~-------------~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~-~v~~~d~~~W~~~fl 546 (854)
T PLN02205 481 LVVSEFIGCSPSLS-------------GAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYR-YVSTHDVGYWARSFL 546 (854)
T ss_pred eEeeeccchhHHhC-------------cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHhhCCHHHHHHHHH
Confidence 33344444443332 3678899999999999999998532222222222222 234567777777777
Q ss_pred HHHHHh
Q 008154 563 QVFEWA 568 (576)
Q Consensus 563 ~~y~~~ 568 (576)
+-.+.+
T Consensus 547 ~~l~~~ 552 (854)
T PLN02205 547 QDLERT 552 (854)
T ss_pred HHHHHH
Confidence 666554
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.2e-10 Score=93.62 Aligned_cols=89 Identities=22% Similarity=0.320 Sum_probs=79.8
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 538 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~ 538 (576)
++++|+..++++...+|+||||+|+|+.+.++..+.+.+ +.+++.++ |++++.+.+..++. ||+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~----------~~~~~~~~--~~~el~~~i~~ll~----~~~ 64 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFED----------GEHIITYN--DPEELAEKIEYLLE----NPE 64 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCC----------CCeEEEEC--CHHHHHHHHHHHHC----CHH
Confidence 468899999999999999999999999999999999988 77888886 89999999998875 899
Q ss_pred HHHHHHHHH---HhhhCCHHHHHHHHHH
Q 008154 539 SWEGLMRRG---MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 539 ~~~~~~~~a---~~~~fs~~~~~~~y~~ 563 (576)
.++++++++ +.++|+|++.++++++
T Consensus 65 ~~~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 65 ERRRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 999999988 5679999999998863
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.1e-07 Score=95.70 Aligned_cols=307 Identities=14% Similarity=0.121 Sum_probs=161.4
Q ss_pred ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCC
Q 008154 80 KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS 159 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~ 159 (576)
.+||--.=+..++++|.+.||+|.+++..+.-... ..+ -.|++++.++...
T Consensus 10 GTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~---l~~--------------------------~~g~~~~~~~~~~ 60 (352)
T PRK12446 10 GSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKT---IIE--------------------------KENIPYYSISSGK 60 (352)
T ss_pred CcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccc---cCc--------------------------ccCCcEEEEeccC
Confidence 36888788889999999999999999865432110 000 0245555554222
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEE
Q 008154 160 YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSIL 239 (576)
Q Consensus 160 ~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ 239 (576)
+.+... ..+......+..+..++++.+ ++.+|||||.+.+..++ |..+..+. .++|+++
T Consensus 61 l~~~~~---------~~~~~~~~~~~~~~~~~~~i~-----~~~kPdvvi~~Ggy~s~-p~~~aa~~------~~~p~~i 119 (352)
T PRK12446 61 LRRYFD---------LKNIKDPFLVMKGVMDAYVRI-----RKLKPDVIFSKGGFVSV-PVVIGGWL------NRVPVLL 119 (352)
T ss_pred cCCCch---------HHHHHHHHHHHHHHHHHHHHH-----HhcCCCEEEecCchhhH-HHHHHHHH------cCCCEEE
Confidence 222100 011111122223333332221 12289999998766554 34444444 5788876
Q ss_pred EeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcc
Q 008154 240 VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG 319 (576)
Q Consensus 240 t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~ 319 (576)
...+... |+ ..+...+.++.+.+-=+...
T Consensus 120 ~e~n~~~------------g~----------------------------~nr~~~~~a~~v~~~f~~~~----------- 148 (352)
T PRK12446 120 HESDMTP------------GL----------------------------ANKIALRFASKIFVTFEEAA----------- 148 (352)
T ss_pred ECCCCCc------------cH----------------------------HHHHHHHhhCEEEEEccchh-----------
Confidence 5443210 11 12344567787765322111
Q ss_pred hhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEe-cccccccCHH
Q 008154 320 LHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFI-GRLDYQKGID 398 (576)
Q Consensus 320 l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~-Gr~~~~Kg~~ 398 (576)
+.+ +..++.++-|.|...... .. +...++.++++ ++.++|+.. |... .+.+.
T Consensus 149 --~~~--~~~k~~~tG~Pvr~~~~~-~~-------------------~~~~~~~~~l~--~~~~~iLv~GGS~G-a~~in 201 (352)
T PRK12446 149 --KHL--PKEKVIYTGSPVREEVLK-GN-------------------REKGLAFLGFS--RKKPVITIMGGSLG-AKKIN 201 (352)
T ss_pred --hhC--CCCCeEEECCcCCccccc-cc-------------------chHHHHhcCCC--CCCcEEEEECCccc-hHHHH
Confidence 111 235677777777643321 11 23344566765 455555555 4444 44453
Q ss_pred H-HHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHH
Q 008154 399 L-IRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYA 476 (576)
Q Consensus 399 ~-ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEA 476 (576)
. +.+++..+.. ++++++ .|..+ .++.... .. ++. ..+|..+.+..+|+.||++|.- +-++|+.|+
T Consensus 202 ~~~~~~l~~l~~-~~~vv~~~G~~~--~~~~~~~----~~-~~~-~~~f~~~~m~~~~~~adlvIsr----~G~~t~~E~ 268 (352)
T PRK12446 202 ETVREALPELLL-KYQIVHLCGKGN--LDDSLQN----KE-GYR-QFEYVHGELPDILAITDFVISR----AGSNAIFEF 268 (352)
T ss_pred HHHHHHHHhhcc-CcEEEEEeCCch--HHHHHhh----cC-CcE-EecchhhhHHHHHHhCCEEEEC----CChhHHHHH
Confidence 3 4444555533 476665 45432 3332221 11 222 2355433455799999999854 578899999
Q ss_pred HHcCCceEEeCccc----ccc-----ccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHhhhCHHHHH
Q 008154 477 MRYGTIPVVHATGG----LRD-----TVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTYREHKSSWE 541 (576)
Q Consensus 477 ma~G~pvIat~~gg----~~e-----~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~~~~~~~~~ 541 (576)
+++|+|.|...... ..+ .+.+ .+.+..+... +++.+++.+.+++. |++.+.
T Consensus 269 ~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~----------~g~~~~l~~~~~~~~~l~~~l~~ll~----~~~~~~ 330 (352)
T PRK12446 269 LTLQKPMLLIPLSKFASRGDQILNAESFER----------QGYASVLYEEDVTVNSLIKHVEELSH----NNEKYK 330 (352)
T ss_pred HHcCCCEEEEcCCCCCCCchHHHHHHHHHH----------CCCEEEcchhcCCHHHHHHHHHHHHc----CHHHHH
Confidence 99999999984321 112 2222 3445555432 46777777777653 665544
|
|
| >KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.2e-09 Score=110.91 Aligned_cols=347 Identities=15% Similarity=0.172 Sum_probs=208.3
Q ss_pred EEEeCCCccchH-HHHHHhhccCCCC----CCCC---cEEEEeecCCCCC--CCChhhhhhcC---------CChhhhcc
Q 008154 207 IFLVNDWHAGLV-PVLLASKYRPHGV----YKDA---RSILVIHNLSHQG--VEPAATYKNLG---------LPSEWYGA 267 (576)
Q Consensus 207 VvH~~~~~~~~~-~~~l~~~~~~~~~----~~~~---~~v~t~H~~~~~~--~~~~~~~~~~~---------~~~~~~~~ 267 (576)
.|.+|+-|+.+. |-+++...-..++ +..+ .+-+|-||.-+.. .+|.+++..+- +...++..
T Consensus 335 AiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleIIy~In~~~l~~ 414 (843)
T KOG2099|consen 335 AIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEIIYEINQRFLQT 414 (843)
T ss_pred eeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 788999888765 4444322111111 1122 4568888874433 56666553221 11111111
Q ss_pred ccc----ccccccccc---cCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCC
Q 008154 268 LEW----VFPTWARTH---ALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDI 340 (576)
Q Consensus 268 ~~~----~~~~~~~~~---~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~ 340 (576)
... ....+.|+. .......++|..+++-.+..|++|.+.+.+.+.+.- +++.+...+.|..--+|||-+
T Consensus 415 i~~~fp~D~drlrrmsiiee~~~~k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~----F~Df~e~~P~KFqNkTNGITP 490 (843)
T KOG2099|consen 415 VAAKFPGDVDRLRRMSIIEENSPEKRINMAHLCIVGSHAVNGVAEIHSEILKQSV----FKDFYELEPEKFQNKTNGITP 490 (843)
T ss_pred HHHHCCCcHHHHhhhhhhhcCCccceeeeeeeeeecccccccHHHHHHHHHHHHH----HHHHHHhChHHhccccCCcCH
Confidence 111 111222221 111344688888888899999999888777665432 355666778888899999988
Q ss_pred CCC---CCCCCccccccCCcCCcc----------------------------cchHhHHHHHHHcCCCCCCCCCEEEEec
Q 008154 341 TEW---NPSSDEHIASHYSIDDLS----------------------------GKVQCKIALQKELGLPIRPDCPLIGFIG 389 (576)
Q Consensus 341 ~~~---~~~~~~~l~~~~~~~~~~----------------------------~~~~~~~~~~~~~~i~~~~~~~~i~~~G 389 (576)
..| ..+.-+++.....+.+|. .+......+.+.++...+++.+.=+-+-
T Consensus 491 RRWL~~cnP~LadlI~e~ige~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~smFDiqVK 570 (843)
T KOG2099|consen 491 RRWLLLCNPGLADLITEKIGEEWITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPSSMFDIQVK 570 (843)
T ss_pred HHHHHhcCchHHHHHHHHhhhHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcchhhhhhHH
Confidence 765 344555666666666662 1222223455566766666666556678
Q ss_pred ccccccCHHH----HHHHHHhhhcC-----CcEEEEEe-CCChhhHHHHHHH------HH--------HhcCceEEEccC
Q 008154 390 RLDYQKGIDL----IRLAAPEILAD-----DIQFVMLG-SGDPQFESWMRDT------EA--------TYKDKYRGWVGF 445 (576)
Q Consensus 390 r~~~~Kg~~~----ll~a~~~L~~~-----~~~lii~G-~g~~~~~~~~~~~------~~--------~~~~~~~~~~~~ 445 (576)
|+..+|+.-+ ++--..++++. .-+.+++| ++-|.+-..+..+ +. ....+++++..|
T Consensus 571 RIHEYKRQllN~l~vi~~y~riK~e~~k~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY 650 (843)
T KOG2099|consen 571 RIHEYKRQLLNCLHVIYLYNRIKEEPAKAFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVGDRLKVIFLENY 650 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhhheeEEEEecCc
Confidence 8888888543 33344555542 22445555 4444333222222 11 122468889999
Q ss_pred ChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe---------
Q 008154 446 NVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF--------- 514 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~--------- 514 (576)
.-.++..++-++|+-=.-|. .|++|++-|+-|.+|+.+|.|.+|..-|+-.+.+ .+|-|+|
T Consensus 651 ~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~G--------eeN~FiFG~~~e~V~~ 722 (843)
T KOG2099|consen 651 RVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAG--------EENFFIFGMRVEDVEA 722 (843)
T ss_pred ccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcC--------cccEEEecccHHHHHH
Confidence 88888788899998765555 7999999999999999999999999888776521 2344443
Q ss_pred ------------------------------CCCCHHHHHHHHHHH---------------------HHHhhhCHHHHHHH
Q 008154 515 ------------------------------LPLSEESMLTALRFA---------------------IRTYREHKSSWEGL 543 (576)
Q Consensus 515 ------------------------------~~~d~~~la~~i~~~---------------------l~~~~~~~~~~~~~ 543 (576)
.|.+++++...+..+ +...+.|++.|.+|
T Consensus 723 L~k~gy~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~hD~f~V~~Df~sYi~~q~kVd~~y~nqk~W~~m 802 (843)
T KOG2099|consen 723 LRKKGYNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMYHDYFLVFADFEAYIKCQEKVDQLYRNQKEWLKM 802 (843)
T ss_pred HHhhcccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhccceEEeeCcHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 234444433322221 22223468889988
Q ss_pred HHHHHh--hhCCHHHHHHHHHHHH
Q 008154 544 MRRGME--KDYTWENAAIQYEQVF 565 (576)
Q Consensus 544 ~~~a~~--~~fs~~~~~~~y~~~y 565 (576)
+-..++ -+||.++.+.+|.+-.
T Consensus 803 si~niA~sgkFSSDRtI~eYa~eI 826 (843)
T KOG2099|consen 803 SILNIAGSGKFSSDRTIAEYAREI 826 (843)
T ss_pred HHHhhhcccccCccchHHHHHHHh
Confidence 887754 4899999999997643
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.9e-06 Score=86.49 Aligned_cols=312 Identities=14% Similarity=0.051 Sum_probs=171.4
Q ss_pred ccCcHHHHHhhHHHHHHhCCCc-EEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCC
Q 008154 80 KTGGLGDVCGSLPVALAARGHR-VMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHP 158 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~~-V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~ 158 (576)
.+||--.-+..++++|.++|++ |.+++........ .....++.++.++..
T Consensus 9 GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~-----------------------------l~~~~~~~~~~I~~~ 59 (357)
T COG0707 9 GTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAF-----------------------------LVKQYGIEFELIPSG 59 (357)
T ss_pred CCccchhHHHHHHHHHHhhCccEEEEecccccceee-----------------------------eccccCceEEEEecc
Confidence 3788888999999999999995 5555433211100 011135777777654
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHH---HHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCC
Q 008154 159 SYHRPGNPYGDINGAFGDNQFRYTLLCYA---ACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDA 235 (576)
Q Consensus 159 ~~~~~~~~y~~~~~~~~~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~ 235 (576)
.+.+.. .+ .+......+..+ ..+.++.+ +||+|..-.+..+. |..++.+. .++
T Consensus 60 ~~~~~~-~~--------~~~~~~~~~~~~~~~a~~il~~~--------kPd~vig~Ggyvs~-P~~~Aa~~------~~i 115 (357)
T COG0707 60 GLRRKG-SL--------KLLKAPFKLLKGVLQARKILKKL--------KPDVVIGTGGYVSG-PVGIAAKL------LGI 115 (357)
T ss_pred cccccC-cH--------HHHHHHHHHHHHHHHHHHHHHHc--------CCCEEEecCCcccc-HHHHHHHh------CCC
Confidence 433311 11 112222222233 33333333 89999987766665 44444444 579
Q ss_pred cEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhcccc
Q 008154 236 RSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVE 315 (576)
Q Consensus 236 ~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~ 315 (576)
|++....+.. .|+.. +...+.|+.|.+.-+...
T Consensus 116 Pv~ihEqn~~------------~G~an----------------------------k~~~~~a~~V~~~f~~~~------- 148 (357)
T COG0707 116 PVIIHEQNAV------------PGLAN----------------------------KILSKFAKKVASAFPKLE------- 148 (357)
T ss_pred CEEEEecCCC------------cchhH----------------------------HHhHHhhceeeecccccc-------
Confidence 9888766542 12211 222345666555322101
Q ss_pred CCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEec-ccccc
Q 008154 316 GGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIG-RLDYQ 394 (576)
Q Consensus 316 ~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~G-r~~~~ 394 (576)
-.....++.+.-|.|..+... .. ...++.... .+.++|+..| ...-.
T Consensus 149 --------~~~~~~~~~~tG~Pvr~~~~~-~~-------------------~~~~~~~~~----~~~~~ilV~GGS~Ga~ 196 (357)
T COG0707 149 --------AGVKPENVVVTGIPVRPEFEE-LP-------------------AAEVRKDGR----LDKKTILVTGGSQGAK 196 (357)
T ss_pred --------ccCCCCceEEecCcccHHhhc-cc-------------------hhhhhhhcc----CCCcEEEEECCcchhH
Confidence 012344677888888754433 11 111222211 1455655554 55544
Q ss_pred cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHH
Q 008154 395 KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQL 474 (576)
Q Consensus 395 Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~l 474 (576)
+=-+.+.++...+.+ +++++....... .++..+...+ ... ....+|.++ +..+|+.+|++|.= +=++|+-
T Consensus 197 ~ln~~v~~~~~~l~~-~~~v~~~~G~~~-~~~~~~~~~~-~~~--~~v~~f~~d-m~~~~~~ADLvIsR----aGa~Ti~ 266 (357)
T COG0707 197 ALNDLVPEALAKLAN-RIQVIHQTGKND-LEELKSAYNE-LGV--VRVLPFIDD-MAALLAAADLVISR----AGALTIA 266 (357)
T ss_pred HHHHHHHHHHHHhhh-CeEEEEEcCcch-HHHHHHHHhh-cCc--EEEeeHHhh-HHHHHHhccEEEeC----CcccHHH
Confidence 422333444445533 566666544322 3444443332 222 345566555 45799999999943 4679999
Q ss_pred HHHHcCCceEEeCcccc---c-----cccccccccccCCCCCcceeEeCCCC--HHHHHHHHHHHHHHhhhCHHHHHHHH
Q 008154 475 YAMRYGTIPVVHATGGL---R-----DTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRTYREHKSSWEGLM 544 (576)
Q Consensus 475 EAma~G~pvIat~~gg~---~-----e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~la~~i~~~l~~~~~~~~~~~~~~ 544 (576)
|..++|+|.|-...+.. . ..+.+ ...|..+...+ ++.+.+.|.+++. +++...+|+
T Consensus 267 E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~----------~gaa~~i~~~~lt~~~l~~~i~~l~~----~~~~l~~m~ 332 (357)
T COG0707 267 ELLALGVPAILVPYPPGADGHQEYNAKFLEK----------AGAALVIRQSELTPEKLAELILRLLS----NPEKLKAMA 332 (357)
T ss_pred HHHHhCCCEEEeCCCCCccchHHHHHHHHHh----------CCCEEEeccccCCHHHHHHHHHHHhc----CHHHHHHHH
Confidence 99999999999765544 1 12222 35566665544 7777777777764 788888888
Q ss_pred HHH
Q 008154 545 RRG 547 (576)
Q Consensus 545 ~~a 547 (576)
.++
T Consensus 333 ~~a 335 (357)
T COG0707 333 ENA 335 (357)
T ss_pred HHH
Confidence 776
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.88 E-value=5e-08 Score=88.96 Aligned_cols=183 Identities=19% Similarity=0.190 Sum_probs=111.8
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
.||+++..--.| ..-||.++++..|+..|++.||+|+|.+........ ..
T Consensus 2 kkIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~-----------------------------~~ 51 (185)
T PF09314_consen 2 KKIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYK-----------------------------EF 51 (185)
T ss_pred ceEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCC-----------------------------Cc
Confidence 479999999888 568999999999999999999999999864222111 11
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCc-cchHHHHHHh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH-AGLVPVLLAS 224 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~-~~~~~~~l~~ 224 (576)
...|+++..++.+..- ....+.+-..++..++...... +.+.||+|++... ++++..+++.
T Consensus 52 ~y~gv~l~~i~~~~~g---------------~~~si~yd~~sl~~al~~~~~~---~~~~~ii~ilg~~~g~~~~~~~r~ 113 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNG---------------SAESIIYDFLSLLHALRFIKQD---KIKYDIILILGYGIGPFFLPFLRK 113 (185)
T ss_pred ccCCeEEEEeCCCCCC---------------chHHHHHHHHHHHHHHHHHhhc---cccCCEEEEEcCCccHHHHHHHHh
Confidence 2257888888644311 0112222222222232111100 1156899998765 4454444443
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
... .+.++++++|.+...- ...+...+.+. .-.|+.+.+.||.+++.|
T Consensus 114 ~~~-----~g~~v~vN~DGlEWkR-------~KW~~~~k~~l--------------------k~~E~~avk~ad~lIaDs 161 (185)
T PF09314_consen 114 LRK-----KGGKVVVNMDGLEWKR-------AKWGRPAKKYL--------------------KFSEKLAVKYADRLIADS 161 (185)
T ss_pred hhh-----cCCcEEECCCcchhhh-------hhcCHHHHHHH--------------------HHHHHHHHHhCCEEEEcC
Confidence 221 4679999999763211 01111111110 135788899999999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCC
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGID 339 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd 339 (576)
+...+.+.+ .++ ..+..+|++|.|
T Consensus 162 ~~I~~y~~~---------~y~--~~~s~~IaYGad 185 (185)
T PF09314_consen 162 KGIQDYIKE---------RYG--RKKSTFIAYGAD 185 (185)
T ss_pred HHHHHHHHH---------HcC--CCCcEEecCCCC
Confidence 998877642 233 356789999976
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.9e-08 Score=101.05 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=99.2
Q ss_pred HHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHH
Q 008154 398 DLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 475 (576)
Q Consensus 398 ~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lE 475 (576)
+..|++++.|.+ |+++|-| |-+.+ ....+..+ +.. .+++.+.++....+..+++.||+++.+|..|+++++++|
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y-~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~e 366 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKY-DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRR 366 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-Hhc-CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHH
Confidence 999999999966 8999999 76643 22344444 344 677888998875667999999999999999999999999
Q ss_pred HHHcCCceEEeCcc-ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 476 AMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 476 Ama~G~pvIat~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|+..|+|+++-+.- +..+.+. .|.+++.+|+++++++|.+++. +++.+++.
T Consensus 367 A~~~G~pI~afd~t~~~~~~i~-------------~g~l~~~~~~~~m~~~i~~lL~----d~~~~~~~ 418 (438)
T TIGR02919 367 AFEYNLLILGFEETAHNRDFIA-------------SENIFEHNEVDQLISKLKDLLN----DPNQFREL 418 (438)
T ss_pred HHHcCCcEEEEecccCCccccc-------------CCceecCCCHHHHHHHHHHHhc----CHHHHHHH
Confidence 99999999997643 4445543 3788999999999999999975 66555543
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.52 E-value=2e-06 Score=75.92 Aligned_cols=107 Identities=18% Similarity=0.245 Sum_probs=66.0
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++... +.++.+++++|.+.|++|+++++..... . ...
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~~-----~-------------------------~~~ 41 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDYE-----K-------------------------YEI 41 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCch-----h-------------------------hhH
Confidence 588887642 3468899999999999999999843221 0 011
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCcc-chHHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA-GLVPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~-~~~~~~l~~~ 225 (576)
..++.++.++.+ ++ ....+.. .....+.++.. +|||||+|...+ ++.+.+++..
T Consensus 42 ~~~i~~~~~~~~---~k-------------~~~~~~~-~~~l~k~ik~~--------~~DvIh~h~~~~~~~~~~l~~~~ 96 (139)
T PF13477_consen 42 IEGIKVIRLPSP---RK-------------SPLNYIK-YFRLRKIIKKE--------KPDVIHCHTPSPYGLFAMLAKKL 96 (139)
T ss_pred hCCeEEEEecCC---CC-------------ccHHHHH-HHHHHHHhccC--------CCCEEEEecCChHHHHHHHHHHH
Confidence 256777777432 11 0111111 11333443333 799999999776 4555555443
Q ss_pred ccCCCCCCC-CcEEEEeecC
Q 008154 226 YRPHGVYKD-ARSILVIHNL 244 (576)
Q Consensus 226 ~~~~~~~~~-~~~v~t~H~~ 244 (576)
.+ +|+|+|.|+.
T Consensus 97 -------~~~~~~i~~~hg~ 109 (139)
T PF13477_consen 97 -------LKNKKVIYTVHGS 109 (139)
T ss_pred -------cCCCCEEEEecCC
Confidence 34 8999999975
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00031 Score=72.67 Aligned_cols=186 Identities=11% Similarity=0.072 Sum_probs=103.6
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecC-CCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN-GIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~n-Gvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
+.|+...+.++...+.+.+ -+.+..++.++-| ++|.-...... .+..+.+.
T Consensus 143 ~la~l~f~~t~~~~~~L~~----------eg~~~~~i~~tG~~~iD~l~~~~~~------------------~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ----------MGEDPDRVFNVGSPGLDNILSLDLL------------------SKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH----------cCCCCCcEEEECCcHHHHHHhhhcc------------------CHHHHHHH
Confidence 4567777777665554421 1334567777766 55532211111 03455667
Q ss_pred cCCCCCCCCCEEEEecccc--c---ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHh--cCceEEEccCC
Q 008154 374 LGLPIRPDCPLIGFIGRLD--Y---QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGFN 446 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~--~---~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~--~~~~~~~~~~~ 446 (576)
+|++. ++..+++..-|-+ . .+.+..+++++..+. .++.+++-..+ +..+...+.+.+.. ..++......+
T Consensus 195 lgl~~-~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~-~~~~vi~P~~~-p~~~~i~~~i~~~~~~~~~v~l~~~l~ 271 (365)
T TIGR03568 195 LGIDL-DKPYALVTFHPVTLEKESAEEQIKELLKALDELN-KNYIFTYPNAD-AGSRIINEAIEEYVNEHPNFRLFKSLG 271 (365)
T ss_pred hCCCC-CCCEEEEEeCCCcccccCchHHHHHHHHHHHHhc-cCCEEEEeCCC-CCchHHHHHHHHHhcCCCCEEEECCCC
Confidence 77752 1234444444432 2 234555666665542 24433321121 22233333333322 23455555445
Q ss_pred hhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 447 ~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
-.....+++.||++|-.| .|. +.||.++|+|+|+. +..+|.+.. |.+++.+ ..|++++.+++
T Consensus 272 ~~~~l~Ll~~a~~vitdS----Sgg-i~EA~~lg~Pvv~l--~~R~e~~~~----------g~nvl~v-g~~~~~I~~a~ 333 (365)
T TIGR03568 272 QERYLSLLKNADAVIGNS----SSG-IIEAPSFGVPTINI--GTRQKGRLR----------ADSVIDV-DPDKEEIVKAI 333 (365)
T ss_pred hHHHHHHHHhCCEEEEcC----hhH-HHhhhhcCCCEEee--cCCchhhhh----------cCeEEEe-CCCHHHHHHHH
Confidence 555668999999999443 233 38999999999954 467788776 6788877 44889888888
Q ss_pred HHH
Q 008154 527 RFA 529 (576)
Q Consensus 527 ~~~ 529 (576)
.++
T Consensus 334 ~~~ 336 (365)
T TIGR03568 334 EKL 336 (365)
T ss_pred HHH
Confidence 874
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00016 Score=73.38 Aligned_cols=91 Identities=16% Similarity=0.231 Sum_probs=63.5
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
...++++.|..... .++++++.+ ++.+++++|..... . ...++. +.+++.+...++++.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~~--~--------~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAAD--P--------RPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCccc--c--------cCCCEE-EeecChHHHHHHHHhCCEE
Confidence 45688888887655 667777775 45788888776311 0 133443 5566645566899999999
Q ss_pred EeCCCCCCCcHH-HHHHHHcCCceEEeCcccccc
Q 008154 461 LMPSRFEPCGLN-QLYAMRYGTIPVVHATGGLRD 493 (576)
Q Consensus 461 v~ps~~E~~g~s-~lEAma~G~pvIat~~gg~~e 493 (576)
|-. .|.+ ++||+++|+|+|.....+..|
T Consensus 255 Is~-----~G~~t~~Ea~~~g~P~l~ip~~~~~E 283 (318)
T PF13528_consen 255 ISK-----GGYTTISEALALGKPALVIPRPGQDE 283 (318)
T ss_pred EEC-----CCHHHHHHHHHcCCCEEEEeCCCCch
Confidence 965 4555 999999999999987655433
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00055 Score=71.97 Aligned_cols=123 Identities=20% Similarity=0.192 Sum_probs=75.0
Q ss_pred CCCEEEEeccccc---ccCHHHHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhc
Q 008154 381 DCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 456 (576)
Q Consensus 381 ~~~~i~~~Gr~~~---~Kg~~~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 456 (576)
+..++++.|.... .+-...+++++..+ +.++++ +|..... . .....++. ..++-+ ...++..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~-~-------~~~~~~v~-~~~~~p--~~~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG-A-------EDLPDNVR-VVDFVP--HDWLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc-c-------cCCCCceE-EeCCCC--HHHHhhh
Confidence 4567777788753 34455666666654 556554 4544311 1 12233443 344422 2258999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHH
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAI 530 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l 530 (576)
||++|.- +-..|.+||+++|+|+|.....+ +.+.+.. .+.|...+.. +.+++++++.+++
T Consensus 305 ~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~----------~G~g~~l~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE----------LGAGPALDPRELTAERLAAALRRLL 370 (401)
T ss_pred hheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHH----------CCCCCCCCcccCCHHHHHHHHHHHh
Confidence 9999943 33488999999999999986543 2333333 3566666554 5788888888876
Q ss_pred H
Q 008154 531 R 531 (576)
Q Consensus 531 ~ 531 (576)
.
T Consensus 371 ~ 371 (401)
T cd03784 371 D 371 (401)
T ss_pred C
Confidence 4
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.001 Score=66.04 Aligned_cols=97 Identities=12% Similarity=0.063 Sum_probs=66.9
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhcCCcE-EEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQ-FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~-lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
..++++.|...+.+....+++++..+.. +++ .+++|.+.+..++..+.... . .++. ..++.++ +..+|+.||+.
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~~-~~~i~vv~G~~~~~~~~l~~~~~~-~-~~i~-~~~~~~~-m~~lm~~aDl~ 245 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQI-NISITLVTGSSNPNLDELKKFAKE-Y-PNII-LFIDVEN-MAELMNEADLA 245 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcccc-CceEEEEECCCCcCHHHHHHHHHh-C-CCEE-EEeCHHH-HHHHHHHCCEE
Confidence 3568888888877767788888877632 333 34678876555444444333 2 2444 3444444 55899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCc
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHAT 488 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~ 488 (576)
|.+ .|.|+.|++++|+|+|+...
T Consensus 246 Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 246 IGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EEC-----CchHHHHHHHcCCCEEEEEe
Confidence 984 67999999999999998654
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0022 Score=67.15 Aligned_cols=217 Identities=11% Similarity=-0.033 Sum_probs=118.1
Q ss_pred HHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHH
Q 008154 291 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 370 (576)
Q Consensus 291 ~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 370 (576)
+...+.|+.+.+..+...+.+ .....++.++-|.+=.. ..... +
T Consensus 155 ~l~~~~a~~v~~~~~~t~~~l-------------~~~g~k~~~vGnPv~d~-l~~~~-------------------~--- 198 (396)
T TIGR03492 155 LMRSRRCLAVFVRDRLTARDL-------------RRQGVRASYLGNPMMDG-LEPPE-------------------R--- 198 (396)
T ss_pred HhhchhhCEEeCCCHHHHHHH-------------HHCCCeEEEeCcCHHhc-Ccccc-------------------c---
Confidence 334468888888776555443 32334777888776322 21111 0
Q ss_pred HHHcCCCCCCCC-CEEEEeccc-c-cccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHH-HhcC--------
Q 008154 371 QKELGLPIRPDC-PLIGFIGRL-D-YQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEA-TYKD-------- 437 (576)
Q Consensus 371 ~~~~~i~~~~~~-~~i~~~Gr~-~-~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~-~~~~-------- 437 (576)
.+++ ++. .++++.|.- . ..+++..++++++.|.+ +++++++.-.+....+...+.+.+ ....
T Consensus 199 ---~~l~--~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 273 (396)
T TIGR03492 199 ---KPLL--TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQT 273 (396)
T ss_pred ---cccC--CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccc
Confidence 0332 233 344444533 3 45778899999999965 477777654222334444443332 1110
Q ss_pred ------ceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcce
Q 008154 438 ------KYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTG 511 (576)
Q Consensus 438 ------~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G 511 (576)
.+. +..+..+ ...+++.||++|.. .|++-.|++++|+|+|.....+......-+.... . -...+
T Consensus 274 ~~~~~~~~~-v~~~~~~-~~~~l~~ADlvI~r-----SGt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~--~-l~g~~ 343 (396)
T TIGR03492 274 SLFQKGTLE-VLLGRGA-FAEILHWADLGIAM-----AGTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQS--R-LLGGS 343 (396)
T ss_pred hhhccCceE-EEechHh-HHHHHHhCCEEEEC-----cCHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhH--h-hcCCE
Confidence 122 2223223 45799999999987 4667799999999999987332211111000000 0 00133
Q ss_pred eEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHH
Q 008154 512 WSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYE 562 (576)
Q Consensus 512 ~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~ 562 (576)
+.+...+++.+++.+.+++. |++.+.+|.++. +......+++++...
T Consensus 344 ~~l~~~~~~~l~~~l~~ll~----d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 344 VFLASKNPEQAAQVVRQLLA----DPELLERCRRNGQERMGPPGASARIAESIL 393 (396)
T ss_pred EecCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 44445678888888887764 777777766432 223345555555443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0005 Score=70.43 Aligned_cols=190 Identities=13% Similarity=0.055 Sum_probs=104.3
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
+.|+..++.++..++.+.+ .+.++++|.++-|- +|.-........ . .......
T Consensus 121 ~la~lhf~~t~~~~~~L~~----------~G~~~~rI~~vG~~~~D~l~~~~~~~~------------~----~~~~~~i 174 (346)
T PF02350_consen 121 KLAHLHFAPTEEARERLLQ----------EGEPPERIFVVGNPGIDALLQNKEEIE------------E----KYKNSGI 174 (346)
T ss_dssp HH-SEEEESSHHHHHHHHH----------TT--GGGEEE---HHHHHHHHHHHTTC------------C-----HHHHHH
T ss_pred hhhhhhccCCHHHHHHHHh----------cCCCCCeEEEEChHHHHHHHHhHHHHh------------h----hhhhHHH
Confidence 5788889988888777642 24567788888773 332100000000 0 0000111
Q ss_pred cCCCCCCCCCEEEEeccccc---ccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhH
Q 008154 374 LGLPIRPDCPLIGFIGRLDY---QKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPI 449 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~---~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (576)
.... ++..++++.=|.+. ......+.++++.|.+ +++++++.....|.........-..+ .++..+.+.....
T Consensus 175 ~~~~--~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~ 251 (346)
T PF02350_consen 175 LQDA--PKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEE 251 (346)
T ss_dssp HHCT--TSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHH
T ss_pred Hhcc--CCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHH
Confidence 1112 35566666655442 3556788888888876 48888887765443333333222233 3777777666666
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHH-HHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHH
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQL-YAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 527 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~l-EAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~ 527 (576)
...+++.|+++|--| | .+. ||.++|+|+|.- +.|...+.... +.+.+ ++ .|.+++.+++.
T Consensus 252 ~l~ll~~a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~----------~~nvl-v~-~~~~~I~~ai~ 313 (346)
T PF02350_consen 252 YLSLLKNADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRER----------GSNVL-VG-TDPEAIIQAIE 313 (346)
T ss_dssp HHHHHHHESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHT----------TSEEE-ET-SSHHHHHHHHH
T ss_pred HHHHHhcceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhh----------cceEE-eC-CCHHHHHHHHH
Confidence 668999999998654 5 666 999999999997 56777777776 55555 65 68999999999
Q ss_pred HHHH
Q 008154 528 FAIR 531 (576)
Q Consensus 528 ~~l~ 531 (576)
+++.
T Consensus 314 ~~l~ 317 (346)
T PF02350_consen 314 KALS 317 (346)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8886
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0042 Score=62.86 Aligned_cols=131 Identities=18% Similarity=0.133 Sum_probs=74.6
Q ss_pred HHHHHHcCCCCCCCCCEEEEeccccccc-----C-HHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEE
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQK-----G-IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 441 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~K-----g-~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~ 441 (576)
....+.+|++ ++ .+|+. |++..| | -..+-+.++.|.+..-.++++-...++ .+ +.+.++ +..
T Consensus 168 ~~vl~~lg~~--~~-~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~-~~----~~~~~~--~~i 235 (335)
T PF04007_consen 168 PEVLKELGLD--DE-PYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ-RE----LFEKYG--VII 235 (335)
T ss_pred hhHHHHcCCC--CC-CEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch-hh----HHhccC--ccc
Confidence 4566788865 33 34432 444322 2 133445666665543335555544321 11 222332 221
Q ss_pred EccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc---cccccccccccccCCCCCcceeEeCCCC
Q 008154 442 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG---LRDTVENFNPFAREGSGEGTGWSFLPLS 518 (576)
Q Consensus 442 ~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d 518 (576)
... ..+ ...++..||++|- +.|+-..||...|+|.|++..|- ..+.+. +.|.++...|
T Consensus 236 ~~~-~vd-~~~Ll~~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~------------~~Gll~~~~~ 296 (335)
T PF04007_consen 236 PPE-PVD-GLDLLYYADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLI------------EKGLLYHSTD 296 (335)
T ss_pred cCC-CCC-HHHHHHhcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHH------------HCCCeEecCC
Confidence 111 111 2368999999984 45788899999999999986543 334443 4688888889
Q ss_pred HHHHHHHHHHH
Q 008154 519 EESMLTALRFA 529 (576)
Q Consensus 519 ~~~la~~i~~~ 529 (576)
++++.+.+.+.
T Consensus 297 ~~ei~~~v~~~ 307 (335)
T PF04007_consen 297 PDEIVEYVRKN 307 (335)
T ss_pred HHHHHHHHHHh
Confidence 98877755444
|
They are found in archaea and some bacteria and have no known function. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0011 Score=69.35 Aligned_cols=183 Identities=15% Similarity=-0.021 Sum_probs=91.8
Q ss_pred HHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH--hcCceEEEccCC
Q 008154 371 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRGWVGFN 446 (576)
Q Consensus 371 ~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~ 446 (576)
|+.+|+| ++.++++...+ ..|=-+..++.+.++.+ ++.+|++............+.+++. ...++++....+
T Consensus 276 R~~~gLp--~d~vvF~~fn~--~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~ 351 (468)
T PF13844_consen 276 RAQYGLP--EDAVVFGSFNN--LFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAP 351 (468)
T ss_dssp TGGGT----SSSEEEEE-S---GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---
T ss_pred HHHcCCC--CCceEEEecCc--cccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCC
Confidence 5678888 56666665554 45667777888877765 7888888765532222223333221 124565433223
Q ss_pred hhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 447 ~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
.+.-...++.+||+|-|..+ +-|++.+||+.+|+|||+-....+..-+..--.. .-|-.-|+.. |.++..+.-
T Consensus 352 ~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~----~lGl~ElIA~--s~~eYv~~A 424 (468)
T PF13844_consen 352 REEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILR----ALGLPELIAD--SEEEYVEIA 424 (468)
T ss_dssp HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHH----HHT-GGGB-S--SHHHHHHHH
T ss_pred HHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHH----HcCCchhcCC--CHHHHHHHH
Confidence 33333567899999998644 5579999999999999985433322211100000 0022223322 555554443
Q ss_pred HHHHHHhhhCHHHHHHHHHHH---H--hhhCCHHHHHHHHHHHHHHh
Q 008154 527 RFAIRTYREHKSSWEGLMRRG---M--EKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a---~--~~~fs~~~~~~~y~~~y~~~ 568 (576)
.++- .|++.+.++.++- + +.-|+-..+++++++.|+.+
T Consensus 425 v~La----~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 425 VRLA----TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp HHHH----H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred HHHh----CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 3333 3555555444332 2 23699999999999999875
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0068 Score=61.07 Aligned_cols=165 Identities=16% Similarity=0.057 Sum_probs=99.0
Q ss_pred HHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 292 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 292 ~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
...+.+|++.++=++-.+.. ....-..+.|-+..-.. .+-.. +++.++
T Consensus 132 ~i~~~~D~lLailPFE~~~y-------------~k~g~~~~yVGHpl~d~--i~~~~-----------------~r~~ar 179 (381)
T COG0763 132 KIAKYVDHLLAILPFEPAFY-------------DKFGLPCTYVGHPLADE--IPLLP-----------------DREAAR 179 (381)
T ss_pred HHHHHhhHeeeecCCCHHHH-------------HhcCCCeEEeCChhhhh--ccccc-----------------cHHHHH
Confidence 34578999999888655433 32333345555543211 11111 156799
Q ss_pred HHcCCCCCCCCCEEEEec-cccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 372 KELGLPIRPDCPLIGFIG-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~G-r~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
+.++++.+.. .+.+..| |-.. .+-...+++|+++|.. ++.++++--... .++................++ .+
T Consensus 180 ~~l~~~~~~~-~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~-~~~~~~~~~~~~~~~~~~~~~--~~ 255 (381)
T COG0763 180 EKLGIDADEK-TLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA-KYRRIIEEALKWEVAGLSLIL--ID 255 (381)
T ss_pred HHhCCCCCCC-eEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH-HHHHHHHHHhhccccCceEEe--cC
Confidence 9999985433 3344444 4444 5567889999999985 688888755442 223333322221111122222 23
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-Ccccccccccc
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVEN 497 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~ 497 (576)
......+..||+.+.. +|++.+|+|.+|+|.|++ ...++.-++..
T Consensus 256 ~~~~~a~~~aD~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak 301 (381)
T COG0763 256 GEKRKAFAAADAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAK 301 (381)
T ss_pred chHHHHHHHhhHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHH
Confidence 3455789999998765 699999999999999986 46666554443
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00067 Score=70.09 Aligned_cols=179 Identities=18% Similarity=0.160 Sum_probs=91.3
Q ss_pred eEEEEeec---------cCCccccCcHHHHHhhHHHHHHhC--------CC----cEEEEEecCCCCCCcccchhccccC
Q 008154 67 NIVFVTAE---------AAPYSKTGGLGDVCGSLPVALAAR--------GH----RVMVVSPRYFNGTAADENFTLAKDL 125 (576)
Q Consensus 67 kI~~~s~e---------~~P~~~~GG~~~~~~~la~~l~~~--------G~----~V~vi~~~~~~~~~~~~~~~~~~~~ 125 (576)
+|+++|.. -.| ..||.-+|+.+++++|.+. |. +|.++|..-+..... .+.+.++
T Consensus 274 ~vvliSpHG~f~q~nvLG~p--DTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t--~~~q~le- 348 (550)
T PF00862_consen 274 NVVLISPHGYFGQENVLGRP--DTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGT--TCNQRLE- 348 (550)
T ss_dssp EEEEE--SS--STTSTTSST--TSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCG--GGTSSEE-
T ss_pred EEEEEcCccccccccccCCC--CCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCC--Ccccccc-
Confidence 79999975 345 3899999999999999763 44 477888554332111 0111100
Q ss_pred ceeEEEeecCCeeEEEEEEeeecCeEEEEecCC-------CCCCCCCCCCCCCCCCCchHHHHHHHHHHHH-hhcccCCC
Q 008154 126 GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHP-------SYHRPGNPYGDINGAFGDNQFRYTLLCYAAC-EAPLVLPL 197 (576)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~-------~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~-~~~~~~~~ 197 (576)
- ..| -++..+++++-. .|..+..++.. ..+| ...+. ++...++
T Consensus 349 -----~-~~g-----------t~~a~IlRvPF~~~~gi~~kwisrf~lWPy--------Le~f---a~d~~~~i~~e~~- 399 (550)
T PF00862_consen 349 -----K-VSG-----------TENARILRVPFGPEKGILRKWISRFDLWPY--------LEEF---ADDAEREILAELQ- 399 (550)
T ss_dssp -----E-ETT-----------ESSEEEEEE-ESESTEEE-S---GGG-GGG--------HHHH---HHHHHHHHHHHHT-
T ss_pred -----c-cCC-----------CCCcEEEEecCCCCcchhhhccchhhchhh--------HHHH---HHHHHHHHHHHhC-
Confidence 0 000 134667777611 13333333331 2222 22221 2222222
Q ss_pred CCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccc
Q 008154 198 GGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWAR 277 (576)
Q Consensus 198 ~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (576)
.+||.||.|...+++++.+++.+. ++|..+|-|+.. ...+...++..+.+..
T Consensus 400 -----~~PdlI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLe------k~Ky~~s~~~w~e~e~---------- 451 (550)
T PF00862_consen 400 -----GKPDLIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLE------KTKYEDSDLYWKEIEE---------- 451 (550)
T ss_dssp -----S--SEEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-H------HHHHHTTTTTSHHHHH----------
T ss_pred -----CCCcEEEeccCcchHHHHHHHhhc-------CCceehhhhccc------cccccccCCCHHHHHh----------
Confidence 279999999988999999998874 799999999862 1111212222221111
Q ss_pred cccCCcCccchhHHHHHHhccceeccCccchhhhc
Q 008154 278 THALDTGEAVNVLKGAIVTADRLLTVSKGYSWEIT 312 (576)
Q Consensus 278 ~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~ 312 (576)
.+.+..++.-+..|++.||.|++-+ .+++.
T Consensus 452 --~Yhfs~qftAd~iamn~adfIItST---~QEI~ 481 (550)
T PF00862_consen 452 --KYHFSCQFTADLIAMNAADFIITST---YQEIA 481 (550)
T ss_dssp --HH-HHHHHHHHHHHHHHSSEEEESS---HHHHH
T ss_pred --hccchhhhhHHHHHhhcCCEEEEcc---hHhhc
Confidence 1112444667788999999999843 34543
|
4.1.13 from EC in the following reaction: |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.11 Score=53.20 Aligned_cols=211 Identities=14% Similarity=0.079 Sum_probs=122.6
Q ss_pred hhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhH
Q 008154 288 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 367 (576)
Q Consensus 288 ~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 367 (576)
.+.+..+...|.|++-|+.-++... .....++.+.-| +........ ......
T Consensus 169 ~~~~~~~~~i~li~aQse~D~~Rf~------------~LGa~~v~v~GN---lKfd~~~~~-------------~~~~~~ 220 (419)
T COG1519 169 FLARLLFKNIDLILAQSEEDAQRFR------------SLGAKPVVVTGN---LKFDIEPPP-------------QLAAEL 220 (419)
T ss_pred HHHHHHHHhcceeeecCHHHHHHHH------------hcCCcceEEecc---eeecCCCCh-------------hhHHHH
Confidence 3566777899999999997776543 222333444433 121111111 111224
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhc---------
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK--------- 436 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~--------- 436 (576)
..++...+.+ +.+++.++.. ..--+.++++...|++ ++..+|++= -||+.-...+.+.+...
T Consensus 221 ~~~r~~l~~~----r~v~iaaSTH--~GEeei~l~~~~~l~~~~~~~llIlVP-RHpERf~~v~~l~~~~gl~~~~rS~~ 293 (419)
T COG1519 221 AALRRQLGGH----RPVWVAASTH--EGEEEIILDAHQALKKQFPNLLLILVP-RHPERFKAVENLLKRKGLSVTRRSQG 293 (419)
T ss_pred HHHHHhcCCC----CceEEEecCC--CchHHHHHHHHHHHHhhCCCceEEEec-CChhhHHHHHHHHHHcCCeEEeecCC
Confidence 5667766632 6778887772 2234568899988877 356666554 44433222333322211
Q ss_pred -----C-ceEEEccCChhHHHHHHhcCCEEEeCC-CCCCCcHHHHHHHHcCCceEEeC-ccccccccccccccccCCCCC
Q 008154 437 -----D-KYRGWVGFNVPISHRITAGCDILLMPS-RFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGE 508 (576)
Q Consensus 437 -----~-~~~~~~~~~~~~~~~ll~~~Dv~v~ps-~~E~~g~s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~ 508 (576)
. +++ +. -+.-++..+|+.+|+.+.-- ..+--|--++|++++|+|+|+-. .-.+.|+..... ..
T Consensus 294 ~~~~~~tdV~-l~-DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~-------~~ 364 (419)
T COG1519 294 DPPFSDTDVL-LG-DTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLL-------QA 364 (419)
T ss_pred CCCCCCCcEE-EE-ecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHH-------hc
Confidence 1 221 22 23445667999999987754 45566788999999999999953 445555554411 13
Q ss_pred cceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH
Q 008154 509 GTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM 548 (576)
Q Consensus 509 ~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~ 548 (576)
+.|+.++ |.+.++.++..++ .|++.+.++++++.
T Consensus 365 ga~~~v~--~~~~l~~~v~~l~----~~~~~r~~~~~~~~ 398 (419)
T COG1519 365 GAGLQVE--DADLLAKAVELLL----ADEDKREAYGRAGL 398 (419)
T ss_pred CCeEEEC--CHHHHHHHHHHhc----CCHHHHHHHHHHHH
Confidence 4566664 4555555555443 47888888888873
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.03 Score=56.64 Aligned_cols=222 Identities=14% Similarity=0.041 Sum_probs=127.9
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH-
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE- 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~- 373 (576)
..|+..++.++..++.+.+. +.+..+|.++-|-+- +.+.... .+..........
T Consensus 144 ~~S~~hfapte~ar~nLl~E----------G~~~~~IfvtGnt~i-Dal~~~~--------------~~~~~~~~~~~~~ 198 (383)
T COG0381 144 HLSDLHFAPTEIARKNLLRE----------GVPEKRIFVTGNTVI-DALLNTR--------------DRVLEDSKILAKG 198 (383)
T ss_pred HhhhhhcCChHHHHHHHHHc----------CCCccceEEeCChHH-HHHHHHH--------------hhhccchhhHHhh
Confidence 46777888887776665321 345667888888642 1111000 000000111111
Q ss_pred cCCCCCCCCCEEEEeccccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhc--CceEEEccCChh
Q 008154 374 LGLPIRPDCPLIGFIGRLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK--DKYRGWVGFNVP 448 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 448 (576)
++.. .++.+++++=|-+. .+++..+++++.++.+ +++.++.----.+...+.. ...+. .++..+.+.+-.
T Consensus 199 ~~~~--~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~---~~~L~~~~~v~li~pl~~~ 273 (383)
T COG0381 199 LDDK--DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV---LKRLKNVERVKLIDPLGYL 273 (383)
T ss_pred hccc--cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH---HHHhCCCCcEEEeCCcchH
Confidence 2222 34566777766653 4999999999999876 3566555433322222222 12232 346667766655
Q ss_pred HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeC-ccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHH
Q 008154 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 527 (576)
Q Consensus 449 ~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~ 527 (576)
....++..|-+.+- .+|...=||-..|+||++-+ .-..+|.+.. ++-.++.. |.+.+.+++.
T Consensus 274 ~f~~L~~~a~~ilt-----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~a-----------gt~~lvg~-~~~~i~~~~~ 336 (383)
T COG0381 274 DFHNLMKNAFLILT-----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEA-----------GTNILVGT-DEENILDAAT 336 (383)
T ss_pred HHHHHHHhceEEEe-----cCCchhhhHHhcCCcEEeeccCCCCccceec-----------CceEEeCc-cHHHHHHHHH
Confidence 55567777755543 45777889999999999965 4566777654 44455443 6787777777
Q ss_pred HHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 528 FAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 528 ~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
.++. +++..++|+... ...-.+.+++++-....+..
T Consensus 337 ~ll~----~~~~~~~m~~~~npYgdg~as~rIv~~l~~~~~~ 374 (383)
T COG0381 337 ELLE----DEEFYERMSNAKNPYGDGNASERIVEILLNYFDS 374 (383)
T ss_pred HHhh----ChHHHHHHhcccCCCcCcchHHHHHHHHHHHhhh
Confidence 7765 777777776543 22222555666555554443
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0014 Score=59.20 Aligned_cols=147 Identities=16% Similarity=0.037 Sum_probs=78.7
Q ss_pred cCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhcc
Q 008154 148 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR 227 (576)
Q Consensus 148 ~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~ 227 (576)
+||+++....+.-.. ...+. |......-..-+.++.+++..+....| .||||..|.+.+. +++++...
T Consensus 19 ~GV~~~~y~~~~~~~-~~~~~-----~~~~~e~~~~rg~av~~a~~~L~~~Gf---~PDvI~~H~GWGe--~Lflkdv~- 86 (171)
T PF12000_consen 19 PGVRVVRYRPPRGPT-PGTHP-----YVRDFEAAVLRGQAVARAARQLRAQGF---VPDVIIAHPGWGE--TLFLKDVF- 86 (171)
T ss_pred CCcEEEEeCCCCCCC-CCCCc-----ccccHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEcCCcch--hhhHHHhC-
Confidence 477777775422111 11121 223344445556666666666655455 8999999974443 24455444
Q ss_pred CCCCCCCCcEEEEe----ecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccch-hHHHHHHhccceec
Q 008154 228 PHGVYKDARSILVI----HNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVN-VLKGAIVTADRLLT 302 (576)
Q Consensus 228 ~~~~~~~~~~v~t~----H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~ad~v~~ 302 (576)
+++|+|..+ |+....--|.++. ......... ....| ...+++..||..++
T Consensus 87 -----P~a~li~Y~E~~y~~~g~d~~FDpe~----p~~~~~~~~----------------~r~rN~~~l~~l~~~D~~is 141 (171)
T PF12000_consen 87 -----PDAPLIGYFEFYYRASGADVGFDPEF----PPSLDDRAR----------------LRMRNAHNLLALEQADAGIS 141 (171)
T ss_pred -----CCCcEEEEEEEEecCCCCcCCCCCCC----CCCHHHHHH----------------HHHHhHHHHHHHHhCCcCcC
Confidence 788887443 2222111233321 111111000 00012 35567889999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEW 343 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~ 343 (576)
.+.+.++..- ..-..||.||.-|||++.+
T Consensus 142 PT~wQ~~~fP------------~~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 142 PTRWQRSQFP------------AEFRSKISVIHDGIDTDRF 170 (171)
T ss_pred CCHHHHHhCC------------HHHHcCcEEeecccchhhc
Confidence 9887664321 2235689999999998754
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.041 Score=56.53 Aligned_cols=198 Identities=19% Similarity=0.098 Sum_probs=109.3
Q ss_pred HHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHH
Q 008154 291 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 370 (576)
Q Consensus 291 ~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 370 (576)
+...+.+|.+.++=++-.+. +.....++..+-|..= +...+... ....
T Consensus 128 ~~i~~~~D~ll~ifPFE~~~-------------y~~~g~~~~~VGHPl~-d~~~~~~~------------------~~~~ 175 (373)
T PF02684_consen 128 KKIKKYVDHLLVIFPFEPEF-------------YKKHGVPVTYVGHPLL-DEVKPEPD------------------RAEA 175 (373)
T ss_pred HHHHHHHhheeECCcccHHH-------------HhccCCCeEEECCcch-hhhccCCC------------------HHHH
Confidence 33446789998887754433 3333445666666542 11211111 3445
Q ss_pred HHHcCCCCCCCCC-EEEEec-cccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC
Q 008154 371 QKELGLPIRPDCP-LIGFIG-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF 445 (576)
Q Consensus 371 ~~~~~i~~~~~~~-~i~~~G-r~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (576)
++.+ ++ ++.. +.+..| |-.. .+.+..++++++++.+ +++++++.... ....+............+.....
T Consensus 176 ~~~~-l~--~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~-~~~~~~i~~~~~~~~~~~~~~~~- 250 (373)
T PF02684_consen 176 REKL-LD--PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAP-EVHEELIEEILAEYPPDVSIVII- 250 (373)
T ss_pred HHhc-CC--CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCC-HHHHHHHHHHHHhhCCCCeEEEc-
Confidence 5555 55 3444 444555 4444 4556999999999987 58888876543 33444344433333222222221
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-Ccccccccccccccccc------CCCC--CcceeEeCC
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAR------EGSG--EGTGWSFLP 516 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~------~~~~--~~~G~~~~~ 516 (576)
.......++.||+.+.. +|++-+|++.+|+|.|.. ..+++.-++...--... ...+ -..-++-+.
T Consensus 251 -~~~~~~~m~~ad~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~ 324 (373)
T PF02684_consen 251 -EGESYDAMAAADAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQED 324 (373)
T ss_pred -CCchHHHHHhCcchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhccc
Confidence 12245689999998866 599999999999999985 44554443332110000 0000 001111134
Q ss_pred CCHHHHHHHHHHHHH
Q 008154 517 LSEESMLTALRFAIR 531 (576)
Q Consensus 517 ~d~~~la~~i~~~l~ 531 (576)
.+++.+++++..++.
T Consensus 325 ~~~~~i~~~~~~ll~ 339 (373)
T PF02684_consen 325 ATPENIAAELLELLE 339 (373)
T ss_pred CCHHHHHHHHHHHhc
Confidence 478888888887775
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.1 Score=52.99 Aligned_cols=92 Identities=13% Similarity=0.076 Sum_probs=55.3
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
..++++.|. -+...+++++..+ +++.++ +|+.+.. .. ....++. +.++..+....++..||++|
T Consensus 189 ~~iLv~~g~----~~~~~l~~~l~~~--~~~~~i-~~~~~~~-~~-------~~~~~v~-~~~~~~~~~~~~l~~ad~vI 252 (321)
T TIGR00661 189 DYILVYIGF----EYRYKILELLGKI--ANVKFV-CYSYEVA-KN-------SYNENVE-IRRITTDNFKELIKNAELVI 252 (321)
T ss_pred CcEEEECCc----CCHHHHHHHHHhC--CCeEEE-EeCCCCC-cc-------ccCCCEE-EEECChHHHHHHHHhCCEEE
Confidence 345555443 2455667777665 344444 3543211 11 1223443 33555444567999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCcccccc
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRD 493 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e 493 (576)
.-+= ..+++||+++|+|+|.....+..|
T Consensus 253 ~~~G----~~t~~Ea~~~g~P~l~ip~~~~~e 280 (321)
T TIGR00661 253 THGG----FSLISEALSLGKPLIVIPDLGQFE 280 (321)
T ss_pred ECCC----hHHHHHHHHcCCCEEEEcCCCccc
Confidence 8752 247999999999999988765434
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.03 Score=54.98 Aligned_cols=167 Identities=12% Similarity=0.044 Sum_probs=104.6
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeC--CChhhHHHHHHHHH-Hhc-CceEEEccC-ChhHHHHHH
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGS--GDPQFESWMRDTEA-TYK-DKYRGWVGF-NVPISHRIT 454 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~--g~~~~~~~~~~~~~-~~~-~~~~~~~~~-~~~~~~~ll 454 (576)
+.++|+.-.+=++..++..+++++.+....++++++ .|- |++.+.+.+..... .+. +++..+..+ +-++-..++
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL 224 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALL 224 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHH
Confidence 445555444556888899999999888778888887 344 44444444443333 444 566655554 334444799
Q ss_pred hcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeC-ccccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHH
Q 008154 455 AGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAI 530 (576)
Q Consensus 455 ~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l 530 (576)
+.||+.++.-. .++.|+.++ .+.+|+||+.+. ..-|.+.... |... +++.+ |...+.++=+++
T Consensus 225 ~~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~----------gv~V-lf~~d~L~~~~v~e~~rql- 291 (322)
T PRK02797 225 RQCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQ----------GLPV-LFTGDDLDEDIVREAQRQL- 291 (322)
T ss_pred HhCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhC----------CCeE-EecCCcccHHHHHHHHHHH-
Confidence 99999998765 689998776 799999999974 6666665544 3333 23332 222222211111
Q ss_pred HHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 531 RTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
...-++.++ |+.++.++.|.++++.+....
T Consensus 292 ----------~~~dk~~I~--Ff~pn~~~~W~~~l~~~~g~~ 321 (322)
T PRK02797 292 ----------ASVDKNIIA--FFSPNYLQGWRNALAIAAGEV 321 (322)
T ss_pred ----------HhhCcceee--ecCHhHHHHHHHHHHHhhCCC
Confidence 111112122 999999999999998876543
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.099 Score=56.52 Aligned_cols=160 Identities=13% Similarity=0.075 Sum_probs=93.5
Q ss_pred HHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHH
Q 008154 291 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 370 (576)
Q Consensus 291 ~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 370 (576)
+...+.+|++.++=++-.+. +.....++..+-|..= +..... .+ +..+
T Consensus 356 kki~k~vD~ll~IfPFE~~~-------------y~~~gv~v~yVGHPL~-d~i~~~-~~-----------------~~~~ 403 (608)
T PRK01021 356 TILEKYLDLLLLILPFEQNL-------------FKDSPLRTVYLGHPLV-ETISSF-SP-----------------NLSW 403 (608)
T ss_pred HHHHHHhhhheecCccCHHH-------------HHhcCCCeEEECCcHH-hhcccC-CC-----------------HHHH
Confidence 33446789999987765433 3334455666666542 111111 11 4567
Q ss_pred HHHcCCCCCCCCCEEEEec-cccc-ccCHHHHHHHHH--hhhcCCcEEEEEeCCChhhHHHHHHHHHHhc-CceEEEccC
Q 008154 371 QKELGLPIRPDCPLIGFIG-RLDY-QKGIDLIRLAAP--EILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF 445 (576)
Q Consensus 371 ~~~~~i~~~~~~~~i~~~G-r~~~-~Kg~~~ll~a~~--~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~-~~~~~~~~~ 445 (576)
++.+|+++ ++..+.+..| |-.. .+.+..+++|++ ++.+ +.++++.. .++...+..+...+... ..+....+
T Consensus 404 r~~lgl~~-~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~-~l~fvvp~-a~~~~~~~i~~~~~~~~~~~~~ii~~- 479 (608)
T PRK01021 404 KEQLHLPS-DKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS-THQLLVSS-ANPKYDHLILEVLQQEGCLHSHIVPS- 479 (608)
T ss_pred HHHcCCCC-CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc-CeEEEEec-CchhhHHHHHHHHhhcCCCCeEEecC-
Confidence 88889863 2334445555 4444 566788999998 5543 67887753 33333333333322222 12222222
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-Ccccccc
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRD 493 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e 493 (576)
+....+++.||+.+.. +|++-+|++.+|+|.|+. ..+++.-
T Consensus 480 --~~~~~~m~aaD~aLaa-----SGTaTLEaAL~g~PmVV~YK~s~Lty 521 (608)
T PRK01021 480 --QFRYELMRECDCALAK-----CGTIVLETALNQTPTIVTCQLRPFDT 521 (608)
T ss_pred --cchHHHHHhcCeeeec-----CCHHHHHHHHhCCCEEEEEecCHHHH
Confidence 1135789999999876 599999999999999985 4454443
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.047 Score=57.16 Aligned_cols=156 Identities=14% Similarity=0.096 Sum_probs=84.2
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...+++..|+....+. ..+-.+++.+.+.+.++++ +|.+.. ....+ ....++. ..++.+. ..++..||+
T Consensus 225 ~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~--~~~~~----~~~~~v~-~~~~~p~--~~ll~~~~~ 294 (392)
T TIGR01426 225 RPVVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVD--PADLG----ELPPNVE-VRQWVPQ--LEILKKADA 294 (392)
T ss_pred CCEEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCC--hhHhc----cCCCCeE-EeCCCCH--HHHHhhCCE
Confidence 3456677788644332 2322333334444666554 455431 11111 1233443 3444332 268999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCccccc----cccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHh
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR----DTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTY 533 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~----e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~ 533 (576)
+|..+ +. .|.+||+++|+|.|+....+-. +.+.. .+.|..+... ++++++++|.+++.
T Consensus 295 ~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~----------~g~g~~l~~~~~~~~~l~~ai~~~l~-- 358 (392)
T TIGR01426 295 FITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAE----------LGLGRHLPPEEVTAEKLREAVLAVLS-- 358 (392)
T ss_pred EEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHH----------CCCEEEeccccCCHHHHHHHHHHHhc--
Confidence 99754 22 4789999999999997544322 22332 3566666543 56888888888875
Q ss_pred hhCHHHHHHHHHH--HHhhhCCHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRR--GMEKDYTWENAAIQYEQV 564 (576)
Q Consensus 534 ~~~~~~~~~~~~~--a~~~~fs~~~~~~~y~~~ 564 (576)
|++.++++.+- .+...-..++.++...+.
T Consensus 359 --~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 359 --DPRYAERLRKMRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred --CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 55433332221 133344555666555443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.061 Score=56.75 Aligned_cols=180 Identities=13% Similarity=0.081 Sum_probs=104.8
Q ss_pred HHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCC-hhhHHHHHHHHHHh---cCceEEEcc
Q 008154 371 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGD-PQFESWMRDTEATY---KDKYRGWVG 444 (576)
Q Consensus 371 ~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~-~~~~~~~~~~~~~~---~~~~~~~~~ 444 (576)
|...||| ++..+++..++ ..|-...++.-.-.+.+ ++-.|.+-|.|+ +.....++.+.+.. ..++++...
T Consensus 421 R~~lglp--~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLP--EDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCC--CCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 5678998 56555555444 34554445544444433 677777777753 44556666665543 246666665
Q ss_pred CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccc-----cccccccccccCCCCCcceeEeCCCCH
Q 008154 445 FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR-----DTVENFNPFAREGSGEGTGWSFLPLSE 519 (576)
Q Consensus 445 ~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~-----e~i~~~~~~~~~~~~~~~G~~~~~~d~ 519 (576)
...+.-.+-+.-+|+++-+..| +-++|..||+-+|+|||+---..+. .++.. -|..-++.. .+.
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~---------agi~e~vA~-s~~ 565 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATN---------AGIPELVAD-SRA 565 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHh---------cCCchhhcC-CHH
Confidence 5556666789999999987655 5578999999999999984221111 11111 022222222 133
Q ss_pred HHHHHHHHHHHHHhhhCHHHHHHHHHH---HHhh--hCCHHHHHHHHHHHHHHhhh
Q 008154 520 ESMLTALRFAIRTYREHKSSWEGLMRR---GMEK--DYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 520 ~~la~~i~~~l~~~~~~~~~~~~~~~~---a~~~--~fs~~~~~~~y~~~y~~~~~ 570 (576)
+.++.+++-. .|+..+++...+ .+.+ -|+.+.+++++...|.++.+
T Consensus 566 dYV~~av~~g-----~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 566 DYVEKAVAFG-----SDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred HHHHHHHHhc-----ccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHH
Confidence 3333333322 233333332221 1222 69999999999999998865
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.12 Score=51.93 Aligned_cols=192 Identities=12% Similarity=0.058 Sum_probs=114.5
Q ss_pred cCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHh
Q 008154 327 RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPE 406 (576)
Q Consensus 327 ~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~ 406 (576)
-..+...+++++|.+.|.+.+.+ ..-.--+.++|.--+. +.+.+-+.+-.
T Consensus 159 ~~~~~~~~~~a~d~~~~~~i~~d-----------------------------a~~~~dL~~ign~~pD-r~e~~ke~~~~ 208 (373)
T COG4641 159 GARNCYYLPWAVDDSLFHPIPPD-----------------------------ASYDVDLNLIGNPYPD-RVEEIKEFFVE 208 (373)
T ss_pred cccceeccCccCCchhcccCCcc-----------------------------ccceeeeEEecCCCcc-HHHHHHHHhhc
Confidence 34567899999999988776532 0122346777765554 22332222211
Q ss_pred hhc---CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCCC---CC-C--cHHHHHHH
Q 008154 407 ILA---DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRF---EP-C--GLNQLYAM 477 (576)
Q Consensus 407 L~~---~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~---E~-~--g~s~lEAm 477 (576)
=.. .+-++.+.|..-+. .- ....- ..+.+.++...- .......+..-|+.++-++. ++ + .+-+.|+|
T Consensus 209 ps~kl~v~rr~~~~g~~y~~-~~-~~~~~-~~~~~yIg~~~~-~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeia 284 (373)
T COG4641 209 PSFKLMVDRRFYVLGPRYPD-DI-WGRTW-EPNVQYIGYYNP-KDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIA 284 (373)
T ss_pred cchhhhccceeeecCCccch-hh-hcccc-cchhhhhhccCc-cchhhhcccccceeeeecHHHHHhhcCCchhhHHHHh
Confidence 111 12456666655111 00 00000 012233333321 13344678888888887662 22 2 67789999
Q ss_pred HcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCH
Q 008154 478 RYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTW 554 (576)
Q Consensus 478 a~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~ 554 (576)
+||.+-++....+..-.+.+ |..-+.+ .|.+++.+.++.++. .+..+++++..+ +...|+.
T Consensus 285 gc~~~liT~~~~~~e~~f~p----------gk~~iv~--~d~kdl~~~~~yll~----h~~erkeiae~~ye~V~~~ht~ 348 (373)
T COG4641 285 GCGGFLITDYWKDLEKFFKP----------GKDIIVY--QDSKDLKEKLKYLLN----HPDERKEIAECAYERVLARHTY 348 (373)
T ss_pred hcCCccccccHHHHHHhcCC----------chheEEe--cCHHHHHHHHHHHhc----CcchHHHHHHhhHHHHHHhccH
Confidence 99999998888777777776 5554443 488999999988876 555566666555 4556888
Q ss_pred HHHHHHHHHHHHHh
Q 008154 555 ENAAIQYEQVFEWA 568 (576)
Q Consensus 555 ~~~~~~y~~~y~~~ 568 (576)
+.-+..+.+....+
T Consensus 349 ~~r~~~~~~~i~sI 362 (373)
T COG4641 349 EERIFKLLNEIASI 362 (373)
T ss_pred HHHHHHHHHHHHHH
Confidence 88887777776653
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.49 Score=47.23 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=74.8
Q ss_pred CCCEEEEecccccccCHHHH---HHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHh--cCceEEEccCChhHHHHHH
Q 008154 381 DCPLIGFIGRLDYQKGIDLI---RLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGFNVPISHRIT 454 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~l---l~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll 454 (576)
+..+++.+|.= .-|.+++ ++|...+.. +..-++|.|.-.|. ...+.+.... +.++. ...|+.+. ..++
T Consensus 219 ~~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~--~~r~~l~~~A~~~p~i~-I~~f~~~~-~~ll 292 (400)
T COG4671 219 GFDILVSVGGG--ADGAELIETALAAAQLLAGLNHKWLIVTGPFMPE--AQRQKLLASAPKRPHIS-IFEFRNDF-ESLL 292 (400)
T ss_pred cceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCH--HHHHHHHHhcccCCCeE-EEEhhhhH-HHHH
Confidence 45677777743 3344444 444444333 22347778876542 2233333322 23443 34465554 4799
Q ss_pred hcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc--ccccccccccccccCCCCCcceeEeCCC-CHHHHHHHHHHHHH
Q 008154 455 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG--GLRDTVENFNPFAREGSGEGTGWSFLPL-SEESMLTALRFAIR 531 (576)
Q Consensus 455 ~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g--g~~e~i~~~~~~~~~~~~~~~G~~~~~~-d~~~la~~i~~~l~ 531 (576)
++|+..|.=+=| +|.+|-+++|+|.+....+ +-.+++.-... .+.|-..++-+.+ +++.++++|..++.
T Consensus 293 ~gA~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl----~~LGL~dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 293 AGARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRL----EELGLVDVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred Hhhheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHH----HhcCcceeeCcccCChHHHHHHHHhccc
Confidence 999999854322 5789999999999986543 32233322111 1123334443222 47778888877765
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.22 Score=55.43 Aligned_cols=274 Identities=18% Similarity=0.183 Sum_probs=151.8
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcc-cccccccccccccC
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGA-LEWVFPTWARTHAL 281 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 281 (576)
.-|++-+|+.|..++|..++... .++.+-|..|++ ||.. .++.+......+.. +...+.++-. .
T Consensus 140 ~~d~vwihdyhlmllp~~lr~~~------~~~~ig~flhsp-----fpssEi~r~lp~r~eIl~gll~~~~i~f~t---~ 205 (732)
T KOG1050|consen 140 EGDIVWIHDYHLMLLPQMLRERF------NSAKIGFFLHSP-----FPSSEIYRCLPVRKEILRGLLYDDLLGFHT---D 205 (732)
T ss_pred CCCcEEEEcchhhccchhhhccc------ccceEEEeccCC-----CChHHHHHhcccHHHHHHhhhccCcccccc---c
Confidence 45899999999888888877655 467777888987 3322 22333322222211 1111111111 1
Q ss_pred CcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcc
Q 008154 282 DTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 361 (576)
Q Consensus 282 ~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~ 361 (576)
+ ..+.-+..|..+.+.+-. +.....++ ........+..+|-|+|...+....... +
T Consensus 206 d------~arhFls~c~R~l~~~~~------s~~~~~~v--~~rgr~~~v~~~pigid~~r~v~~~~~~----~------ 261 (732)
T KOG1050|consen 206 D------YARHFLSTCSRLLGLEVA------SKFPTAGV--SGRGRDVSVKALPIGIDVQRFVKLLELP----Y------ 261 (732)
T ss_pred c------HHHHHHHHHHHHHHhhhh------ccCCcceE--EeccceeeeeecccccchHHhhccccch----h------
Confidence 1 111111222222111110 00000000 0012334577888899987776443210 0
Q ss_pred cchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCC----hhhHHHHHHH
Q 008154 362 GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGD----PQFESWMRDT 431 (576)
Q Consensus 362 ~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~----~~~~~~~~~~ 431 (576)
-......++... .+..+|+-+-|+...||...=+.|+.++.. ..+.++.+..+. +.+++.+..+
T Consensus 262 -~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v 335 (732)
T KOG1050|consen 262 -VGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCV 335 (732)
T ss_pred -HHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHh
Confidence 000011222221 256778888899999999888888888765 256666655432 2233333333
Q ss_pred HH-------Hhc----CceE-EEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcC----CceEEeCcccccccc
Q 008154 432 EA-------TYK----DKYR-GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYG----TIPVVHATGGLRDTV 495 (576)
Q Consensus 432 ~~-------~~~----~~~~-~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G----~pvIat~~gg~~e~i 495 (576)
.. .+. ..+. ....++....-+++.-+|+++..+..++..++.+|..+|. .+.|.+..-|-.+..
T Consensus 336 ~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl 415 (732)
T KOG1050|consen 336 SVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTL 415 (732)
T ss_pred HhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccc
Confidence 22 111 1121 2334456666688999999999999999999999998884 455666555555554
Q ss_pred ccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 496 ENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 496 ~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
.+ ....+.|-|.++++.+|..++...
T Consensus 416 ~d------------~aivvnpw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 416 ED------------AAIVVNPWDGDEFAILISKALTMS 441 (732)
T ss_pred cc------------cCEEECCcchHHHHHHHHHHhhcC
Confidence 32 455667778999999999998754
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.68 Score=46.37 Aligned_cols=116 Identities=11% Similarity=0.119 Sum_probs=75.9
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeCC--ChhhHHHHHHHHH-Hhc-CceEEEccC-ChhHHHHHH
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSG--DPQFESWMRDTEA-TYK-DKYRGWVGF-NVPISHRIT 454 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~g--~~~~~~~~~~~~~-~~~-~~~~~~~~~-~~~~~~~ll 454 (576)
++++|+.-.+=++.-++..+++++.+....++++++ .|-| +..+.+.+..... .+. .++..+..+ +-++-..++
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL 263 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALL 263 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHH
Confidence 455665444556778888888888876556788777 3444 2333333333333 344 355544444 344455799
Q ss_pred hcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 455 AGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 455 ~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
+.||+.+++.. .++.|+.++ .+.+|+||+.+...-+-..+.+
T Consensus 264 ~~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~ 306 (360)
T PF07429_consen 264 SRCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKE 306 (360)
T ss_pred HhCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHh
Confidence 99999999886 689998776 7999999999876555555554
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.33 Score=50.97 Aligned_cols=155 Identities=15% Similarity=0.141 Sum_probs=91.0
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
..+++.+.|..... .+++-.+++.+.+-++++++...+. .. . ....+.++. ..++-+.. .++..||++
T Consensus 237 ~~~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~-~~-~-----~~~~p~n~~-v~~~~p~~--~~l~~ad~v 304 (406)
T COG1819 237 RPIVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGA-RD-T-----LVNVPDNVI-VADYVPQL--ELLPRADAV 304 (406)
T ss_pred CCeEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEecccc-cc-c-----cccCCCceE-EecCCCHH--HHhhhcCEE
Confidence 34556666766544 4444444444544588888877441 11 1 113344543 34443332 489999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeC--CCCHHHHHHHHHHHHHHhh
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFL--PLSEESMLTALRFAIRTYR 534 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~--~~d~~~la~~i~~~l~~~~ 534 (576)
|... =-.|.+||+.+|+|+|+-..+ .+.+.+.+ -+.|.... .-+.+.++++|.+++.
T Consensus 305 I~hG----G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~----------~G~G~~l~~~~l~~~~l~~av~~vL~--- 367 (406)
T COG1819 305 IHHG----GAGTTSEALYAGVPLVVIPDGADQPLNAERVEE----------LGAGIALPFEELTEERLRAAVNEVLA--- 367 (406)
T ss_pred EecC----CcchHHHHHHcCCCEEEecCCcchhHHHHHHHH----------cCCceecCcccCCHHHHHHHHHHHhc---
Confidence 9764 345789999999999996554 23334444 46777766 4578999999999986
Q ss_pred hCHHHHHHHHH--HHHhhhCCHHHHHHHHHHHH
Q 008154 535 EHKSSWEGLMR--RGMEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 535 ~~~~~~~~~~~--~a~~~~fs~~~~~~~y~~~y 565 (576)
|+.......+ +.+.+.-..+++++...+..
T Consensus 368 -~~~~~~~~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 368 -DDSYRRAAERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred -CHHHHHHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 4332222222 22344445444555554444
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.65 Score=47.48 Aligned_cols=92 Identities=11% Similarity=0.027 Sum_probs=58.2
Q ss_pred CCEEEEeccc-c-cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 382 CPLIGFIGRL-D-YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 382 ~~~i~~~Gr~-~-~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
..+.++.|.= . -.+-+..+++++.+|.+...++++.|..+ .+...+... ... .+. +.+ ....+++.||+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~~~i~~~~~-~~~-~~~-~~~----~~~~~m~~aDl 238 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--GKDLKEIYG-DIS-EFE-ISY----DTHKALLEAEF 238 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--HHHHHHHHh-cCC-CcE-Eec----cHHHHHHhhhH
Confidence 3455566643 2 24556778899999977556777776643 222222222 111 222 222 23468999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
.+.. +|++-+|++.+|+|.|..-
T Consensus 239 al~~-----SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 239 AFIC-----SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred HHhc-----CcHHHHHHHHhCCCEEEEE
Confidence 9865 5999999999999999854
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=2.1 Score=45.21 Aligned_cols=132 Identities=10% Similarity=0.111 Sum_probs=76.1
Q ss_pred HHHHHHHHhhhcCCcEEEEEeCC------ChhhHHHHHHHHHHhcC--ceE-EEccCChhHHHHHHhcCCEEEeCCCCCC
Q 008154 398 DLIRLAAPEILADDIQFVMLGSG------DPQFESWMRDTEATYKD--KYR-GWVGFNVPISHRITAGCDILLMPSRFEP 468 (576)
Q Consensus 398 ~~ll~a~~~L~~~~~~lii~G~g------~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~ll~~~Dv~v~ps~~E~ 468 (576)
..+.++++.|.+++.+++++-.- .+++....+.+.+.... ++. ....++..++..++++||++|-.-.+
T Consensus 260 ~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-- 337 (426)
T PRK10017 260 KAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRLH-- 337 (426)
T ss_pred HHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecch--
Confidence 44556667776666666665431 12233434455444332 222 23335555666899999999977654
Q ss_pred CcHHHHHHHHcCCceEEeC-ccccccccccccccccCCCCCcceeEeCC--CCHHHHHHHHHHHHHHhhhCHHHHHHHHH
Q 008154 469 CGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLP--LSEESMLTALRFAIRTYREHKSSWEGLMR 545 (576)
Q Consensus 469 ~g~s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~~~G~~~~~--~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 545 (576)
+.+=|++.|+|+|+-. ..-...++.+. |...++++. -+.+++.+.+.+++. |++.+++..+
T Consensus 338 ---a~I~a~~~gvP~i~i~Y~~K~~~~~~~l---------g~~~~~~~~~~l~~~~Li~~v~~~~~----~r~~~~~~l~ 401 (426)
T PRK10017 338 ---SAIISMNFGTPAIAINYEHKSAGIMQQL---------GLPEMAIDIRHLLDGSLQAMVADTLG----QLPALNARLA 401 (426)
T ss_pred ---HHHHHHHcCCCEEEeeehHHHHHHHHHc---------CCccEEechhhCCHHHHHHHHHHHHh----CHHHHHHHHH
Confidence 6778999999999954 33333333331 223343433 256777777777765 6655554444
Q ss_pred HH
Q 008154 546 RG 547 (576)
Q Consensus 546 ~a 547 (576)
++
T Consensus 402 ~~ 403 (426)
T PRK10017 402 EA 403 (426)
T ss_pred HH
Confidence 44
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.58 Score=50.67 Aligned_cols=122 Identities=8% Similarity=-0.054 Sum_probs=72.8
Q ss_pred CCEEEEeccccc-----ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--
Q 008154 382 CPLIGFIGRLDY-----QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT-- 454 (576)
Q Consensus 382 ~~~i~~~Gr~~~-----~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll-- 454 (576)
..+++..|.... .+-...+++|++++ +.++++...++. .+ ...+.++. ..++-+. ..++
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~-~~-------~~~p~Nv~-i~~w~Pq--~~lL~h 362 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV-EA-------INLPANVL-TQKWFPQ--RAVLKH 362 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc-Cc-------ccCCCceE-EecCCCH--HHHhcC
Confidence 466677787643 23356666777665 567777655431 11 12233443 3333221 2477
Q ss_pred hcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHH
Q 008154 455 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRF 528 (576)
Q Consensus 455 ~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~ 528 (576)
..++++|.- +-..+..||+.+|+|.|+....+ +...+.. -+.|...+.. +.+++.++|.+
T Consensus 363 p~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~----------~G~G~~l~~~~~t~~~l~~ai~~ 428 (507)
T PHA03392 363 KNVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE----------LGIGRALDTVTVSAAQLVLAIVD 428 (507)
T ss_pred CCCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHH----------cCcEEEeccCCcCHHHHHHHHHH
Confidence 468999843 44568899999999999965432 2233322 3567666543 56778888887
Q ss_pred HHH
Q 008154 529 AIR 531 (576)
Q Consensus 529 ~l~ 531 (576)
++.
T Consensus 429 vl~ 431 (507)
T PHA03392 429 VIE 431 (507)
T ss_pred HhC
Confidence 775
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.72 Score=47.80 Aligned_cols=192 Identities=12% Similarity=0.055 Sum_probs=88.9
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCC-CCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITE-WNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
..+..|.+++.|+...+.+. ..+..... .++..|..-.. +.... ....+.++
T Consensus 131 ~~~~~d~~~~~s~~~~~~~~---------~~f~~~~~--~i~~~G~PR~D~l~~~~----------------~~~~~~i~ 183 (369)
T PF04464_consen 131 NYRNYDYFIVSSEFEKEIFK---------KAFGYPED--KILVTGYPRNDYLFNKS----------------KENRNRIK 183 (369)
T ss_dssp HHTT-SEEEESSHHHHHHHH---------HHTT--GG--GEEES--GGGHHHHHST----------------T-HHHHHH
T ss_pred hccCCcEEEECCHHHHHHHH---------HHhccCcc--eEEEeCCCeEhHHhccC----------------HHHHHHHH
Confidence 44678999999988776543 23343343 34445653211 10010 11145677
Q ss_pred HHcCCCCCCCCCEEEEecccccccCH--------HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEc
Q 008154 372 KELGLPIRPDCPLIGFIGRLDYQKGI--------DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWV 443 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~~Kg~--------~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~ 443 (576)
+.++++ .++.+|+|+=.+...... .+-++.+..+.+.++.+++ ..||......... .....++....
T Consensus 184 ~~~~~~--~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~--k~Hp~~~~~~~~~-~~~~~~i~~~~ 258 (369)
T PF04464_consen 184 KKLGID--KDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLII--KPHPNMKKKFKDF-KEDNSNIIFVS 258 (369)
T ss_dssp HHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE----SHHHHTT-----TT-TTTEEE-T
T ss_pred HHhccC--CCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEE--EeCchhhhchhhh-hccCCcEEECC
Confidence 778877 566799998655432222 1223333334445666555 4455433322221 22334554443
Q ss_pred cCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeC--cccc---ccccccccccccCCCCCcceeEeCCCC
Q 008154 444 GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA--TGGL---RDTVENFNPFAREGSGEGTGWSFLPLS 518 (576)
Q Consensus 444 ~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~--~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d 518 (576)
.. .....++..||++|- -++-++.|++.+++|+|--. .... ...+.++ +....|-.+ .+
T Consensus 259 ~~--~~~~~ll~~aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-------~~~~pg~~~--~~ 322 (369)
T PF04464_consen 259 DN--EDIYDLLAAADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-------EEDLPGPIV--YN 322 (369)
T ss_dssp T---S-HHHHHHT-SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-------TTSSSS-EE--SS
T ss_pred CC--CCHHHHHHhcCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-------HhhCCCcee--CC
Confidence 32 235679999999983 34558999999999999642 2111 1111110 112334444 37
Q ss_pred HHHHHHHHHHHHHH
Q 008154 519 EESMLTALRFAIRT 532 (576)
Q Consensus 519 ~~~la~~i~~~l~~ 532 (576)
.+++.++|.+.+..
T Consensus 323 ~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 323 FEELIEAIENIIEN 336 (369)
T ss_dssp HHHHHHHHTTHHHH
T ss_pred HHHHHHHHHhhhhC
Confidence 89999999988764
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.43 Score=46.89 Aligned_cols=42 Identities=19% Similarity=0.370 Sum_probs=35.0
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|+|++++...+|+ ..||++.-+.+|.+.+-+.-..|..|++.
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~ 42 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGAN 42 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCC
Confidence 7899999999996 59999999999999987765566666654
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.27 Score=38.55 Aligned_cols=35 Identities=14% Similarity=0.109 Sum_probs=24.8
Q ss_pred CccEEEeCCCccchHHHH-HHhhccCCCCCCCCcEEEEeecC
Q 008154 204 EKCIFLVNDWHAGLVPVL-LASKYRPHGVYKDARSILVIHNL 244 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~-l~~~~~~~~~~~~~~~v~t~H~~ 244 (576)
+.||||.|...+.+.-.. +..+. .+.++|||-|+.
T Consensus 50 ~I~IVHgH~a~S~l~hE~i~hA~~------mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RIDIVHGHQAFSTLCHEAILHART------MGLKTVFTDHSL 85 (90)
T ss_pred CeeEEEeehhhhHHHHHHHHHHHh------CCCcEEeecccc
Confidence 679999998666555332 22222 789999999976
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=93.02 E-value=5.7 Score=40.01 Aligned_cols=117 Identities=13% Similarity=-0.006 Sum_probs=68.1
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccc-----cCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHh--cCce
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQ-----KGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATY--KDKY 439 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~-----Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~--~~~~ 439 (576)
..|...++-. +...+.+.+|.=.+. .-...+++.+..+.+ .+..+.|..+-- .-++..+.+.+.. ...+
T Consensus 135 ~~~~~~~~~l--~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRR-Tp~~~~~~L~~~~~~~~~~ 211 (311)
T PF06258_consen 135 AAWAPRLAAL--PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRR-TPPEAEAALRELLKDNPGV 211 (311)
T ss_pred HhhhhhhccC--CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCC-CcHHHHHHHHHhhcCCCce
Confidence 4444444422 345555566642221 223356666666655 467888888752 1234444444433 2344
Q ss_pred EEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc
Q 008154 440 RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 440 ~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
..+.+-..+-...+|+.||.++.+.- +-.=+-||++.|+||..-...+
T Consensus 212 ~~~~~~~~nPy~~~La~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 212 YIWDGTGENPYLGFLAAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EEecCCCCCcHHHHHHhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 34443333334479999999999864 2223689999999999987665
|
The function of this family is unknown. |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=92.54 E-value=4.2 Score=43.49 Aligned_cols=128 Identities=11% Similarity=0.060 Sum_probs=67.9
Q ss_pred CCCEEEEeccccc--ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~~~--~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
...+++..|.... .+-+..++++++. .+..++++..++. .. ..+....+.. ..++-+.. .++...+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~~--~~----~~~~~~~~~~-v~~w~pQ~--~iL~h~~ 341 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGEA--SR----LKEICGDMGL-VVPWCDQL--KVLCHSS 341 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCch--hh----HhHhccCCEE-EeccCCHH--HHhccCc
Confidence 4466666777643 2224444444444 4778887765431 11 1111222332 23332222 4788777
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeC-------CCCHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFL-------PLSEESMLTALR 527 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~-------~~d~~~la~~i~ 527 (576)
+..+-+. +-..|.+||+++|+|.|+-... .+...+.+ .-+.|+.+. .-+.++++++++
T Consensus 342 v~~fvtH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~---------~~g~G~~~~~~~~~~~~~~~~~l~~av~ 410 (459)
T PLN02448 342 VGGFWTH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVE---------DWKIGWRVKREVGEETLVGREEIAELVK 410 (459)
T ss_pred cceEEec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHH---------HhCceEEEecccccCCcCcHHHHHHHHH
Confidence 7333221 2335889999999999996543 22222322 002455542 125788888888
Q ss_pred HHHH
Q 008154 528 FAIR 531 (576)
Q Consensus 528 ~~l~ 531 (576)
+++.
T Consensus 411 ~vl~ 414 (459)
T PLN02448 411 RFMD 414 (459)
T ss_pred HHhc
Confidence 8885
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=92.41 E-value=2.7 Score=42.77 Aligned_cols=111 Identities=17% Similarity=0.123 Sum_probs=68.7
Q ss_pred HHHHHHcCCCCCCCCCEEEEecc-cccccCHH--HHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEcc
Q 008154 368 IALQKELGLPIRPDCPLIGFIGR-LDYQKGID--LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 444 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr-~~~~Kg~~--~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~ 444 (576)
..+...++++. .+..+++..|. ..+.|.+. .+.+.+++|.+++.++++.|..+ ..+..+.+.+.....++-+.+
T Consensus 162 ~~~~~~~~~~~-~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~--e~~~~~~i~~~~~~~~~~l~g 238 (334)
T TIGR02195 162 AAALAKFGLDT-ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK--DHPAGNEIEALLPGELRNLAG 238 (334)
T ss_pred HHHHHHcCCCC-CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh--hHHHHHHHHHhCCcccccCCC
Confidence 33455556541 13344455554 45677754 77777777766678899998753 344455555544333332333
Q ss_pred -CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 445 -FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 445 -~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
.+-.++..+++.||++|-+- .|..=+ |.|.|+|+|+-
T Consensus 239 ~~sL~el~ali~~a~l~I~~D----SGp~Hl-AaA~~~P~i~l 276 (334)
T TIGR02195 239 ETSLDEAVDLIALAKAVVTND----SGLMHV-AAALNRPLVAL 276 (334)
T ss_pred CCCHHHHHHHHHhCCEEEeeC----CHHHHH-HHHcCCCEEEE
Confidence 25556678999999999763 233333 78999999984
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=91.60 E-value=7.2 Score=41.89 Aligned_cols=41 Identities=20% Similarity=0.156 Sum_probs=32.4
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
..+++|+++. +| .-|--+=+.++|+.|+.+|+.|+++++.+
T Consensus 7 ~~~~HVvl~P---fp---aqGHi~P~l~LAk~La~~G~~VTfv~T~~ 47 (477)
T PLN02863 7 PAGTHVLVFP---FP---AQGHMIPLLDLTHRLALRGLTITVLVTPK 47 (477)
T ss_pred CCCCEEEEec---Cc---ccchHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 3457888884 34 45677778999999999999999998765
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=91.15 E-value=2.1 Score=41.37 Aligned_cols=112 Identities=13% Similarity=0.009 Sum_probs=62.8
Q ss_pred CCCEEEEecccccccCHHH--HHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEcc-CChhHHHHHHhcC
Q 008154 381 DCPLIGFIGRLDYQKGIDL--IRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-FNVPISHRITAGC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~--ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~ 457 (576)
+..+++..|.-.+.|++.. ..+.+++|.+...++++.|...+..++..+.+.+..+..++.+.+ .+-.+...+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 4456666666567887544 888888887767889999987533344455555544433444444 3555666899999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
|++|-+- .|..=+ |.|.|+|+|+--....+....+
T Consensus 185 ~~~I~~D----tg~~Hl-A~a~~~p~v~lfg~t~~~~~~P 219 (247)
T PF01075_consen 185 DLVIGND----TGPMHL-AAALGTPTVALFGPTNPERWGP 219 (247)
T ss_dssp SEEEEES----SHHHHH-HHHTT--EEEEESSS-HHHHS-
T ss_pred CEEEecC----ChHHHH-HHHHhCCEEEEecCCCHHHhCC
Confidence 9999774 233333 7899999999533333333333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=91.00 E-value=18 Score=35.94 Aligned_cols=126 Identities=16% Similarity=0.110 Sum_probs=72.4
Q ss_pred HHHHHHcCCCCCCCCCEEEE-e---c--ccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEE
Q 008154 368 IALQKELGLPIRPDCPLIGF-I---G--RLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 441 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~-~---G--r~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~ 441 (576)
....+++|+. ++..+|++ . + -+...++.+.+.++++.|.+.. .+++-. ++.++++-+.+...+.
T Consensus 170 ~evlkeLgl~--~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr-----~~~~~eife~~~n~i~- 239 (346)
T COG1817 170 PEVLKELGLE--EGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPR-----EKEQAEIFEGYRNIII- 239 (346)
T ss_pred HHHHHHcCCC--CCCceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecC-----chhHHHHHhhhccccC-
Confidence 3566788987 33344443 1 1 1223566777788888886655 333322 2223344444432221
Q ss_pred EccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc---ccccccccccccccCCCCCcceeEeCCCC
Q 008154 442 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG---GLRDTVENFNPFAREGSGEGTGWSFLPLS 518 (576)
Q Consensus 442 ~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g---g~~e~i~~~~~~~~~~~~~~~G~~~~~~d 518 (576)
.....+. -+++--|++++ -+.|+-.-||++.|+|.|++.-| ...++.. +.|.++...|
T Consensus 240 pk~~vD~--l~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li------------e~G~~~~s~~ 300 (346)
T COG1817 240 PKKAVDT--LSLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI------------EKGLLYHSTD 300 (346)
T ss_pred CcccccH--HHHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH------------hcCceeecCC
Confidence 1111111 14666777776 35677789999999999998854 3444444 4788887777
Q ss_pred HHHH
Q 008154 519 EESM 522 (576)
Q Consensus 519 ~~~l 522 (576)
+.+.
T Consensus 301 ~~~~ 304 (346)
T COG1817 301 EIAI 304 (346)
T ss_pred HHHH
Confidence 7643
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=90.73 E-value=4.9 Score=42.79 Aligned_cols=135 Identities=12% Similarity=-0.006 Sum_probs=71.1
Q ss_pred CCCEEEEecccc--cccCHHHHHHHHHhhhcCCcEEEEEeCCChh-------hHH-HHHHHHHHhcCceEEEccCChhHH
Q 008154 381 DCPLIGFIGRLD--YQKGIDLIRLAAPEILADDIQFVMLGSGDPQ-------FES-WMRDTEATYKDKYRGWVGFNVPIS 450 (576)
Q Consensus 381 ~~~~i~~~Gr~~--~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 450 (576)
+..+++..|... +.+-+..|..+++.. +..|+++=..+.. .+. .-+...++..++-+...++-+..
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s---~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~- 345 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKS---GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQV- 345 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHH-
Confidence 456666678764 345555666666554 4456665443210 111 00111222222222222332222
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc----cccccccccccccccCCCCCcceeEeCC-----CCHHH
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSFLP-----LSEES 521 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~----gg~~e~i~~~~~~~~~~~~~~~G~~~~~-----~d~~~ 521 (576)
.+++.+++..+-+. +=-+|.+||+++|+|+|+... ......+.+ .-+.|+.++. -+.++
T Consensus 346 -~iL~H~~v~~FvTH--~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~---------~~g~g~~l~~~~~~~~~~e~ 413 (451)
T PLN03004 346 -PVLNHKAVGGFVTH--CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVD---------EIKIAISMNESETGFVSSTE 413 (451)
T ss_pred -HHhCCCccceEecc--CcchHHHHHHHcCCCEEeccccccchhhHHHHHH---------HhCceEEecCCcCCccCHHH
Confidence 48999998444432 223589999999999999543 333333322 0245655542 26788
Q ss_pred HHHHHHHHHH
Q 008154 522 MLTALRFAIR 531 (576)
Q Consensus 522 la~~i~~~l~ 531 (576)
+++++++++.
T Consensus 414 l~~av~~vm~ 423 (451)
T PLN03004 414 VEKRVQEIIG 423 (451)
T ss_pred HHHHHHHHhc
Confidence 8888888874
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=90.54 E-value=5.1 Score=42.89 Aligned_cols=167 Identities=10% Similarity=0.071 Sum_probs=83.9
Q ss_pred CCCEEEEecccc--cccCHHHHHHHHHhhhcCCcEEEEEeCCChhh-----HHHHHHHHHHhcCceEEEccCChhHHHHH
Q 008154 381 DCPLIGFIGRLD--YQKGIDLIRLAAPEILADDIQFVMLGSGDPQF-----ESWMRDTEATYKDKYRGWVGFNVPISHRI 453 (576)
Q Consensus 381 ~~~~i~~~Gr~~--~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 453 (576)
+..+++..|.+. +.+-+..|..+++.+ +..|+++=..+... +..-+...++..++=+...++-+.. .+
T Consensus 278 ~sVvyvsfGS~~~l~~~q~~ela~gl~~s---~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~--~I 352 (472)
T PLN02670 278 NSVVYVALGTEASLRREEVTELALGLEKS---ETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQV--KI 352 (472)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHH--HH
Confidence 456666668765 344455555666554 34566654321100 0011111112222212223343322 47
Q ss_pred HhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc----cccccccccccccccCCCCCcceeEeCC------CCHHHHH
Q 008154 454 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSFLP------LSEESML 523 (576)
Q Consensus 454 l~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~----gg~~e~i~~~~~~~~~~~~~~~G~~~~~------~d~~~la 523 (576)
++...+..+-+. +--.+.+||+++|+|+|+-.. ......+.. -+.|+.+.. -+.+++.
T Consensus 353 L~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~----------~g~Gv~l~~~~~~~~~~~e~i~ 420 (472)
T PLN02670 353 LSHESVGGFLTH--CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG----------KKLGLEVPRDERDGSFTSDSVA 420 (472)
T ss_pred hcCcccceeeec--CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH----------cCeeEEeeccccCCcCcHHHHH
Confidence 877777444332 223689999999999999543 222223322 356666642 2477888
Q ss_pred HHHHHHHHHhhhCH--HHHHHHHHH---HHhhhCCHHHHHHHHHHHHHHh
Q 008154 524 TALRFAIRTYREHK--SSWEGLMRR---GMEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 524 ~~i~~~l~~~~~~~--~~~~~~~~~---a~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+++.+++. ++ +.+.+.+++ .++.+=...++++++.+.+...
T Consensus 421 ~av~~vm~----~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 421 ESVRLAMV----DDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHhc----CcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 88888874 32 112211111 1334556666777776655543
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=89.50 E-value=4.6 Score=36.14 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=22.4
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|||+++++. -||.=+...+...+.. -|+++++|+.
T Consensus 1 M~ILlle~y------~ggSHk~~~~~L~~~~--~~~~~lltLP 35 (168)
T PF12038_consen 1 MRILLLEPY------YGGSHKQWADGLAAHS--EHEWTLLTLP 35 (168)
T ss_pred CeEEEEccc------cccCHHHHHHHHHHhc--cCCEEEEEcC
Confidence 899999753 3555544444333333 6899999864
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=89.06 E-value=9.2 Score=38.57 Aligned_cols=100 Identities=16% Similarity=0.064 Sum_probs=62.3
Q ss_pred CCCEEEEecccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
+..+++..|.=.+.|+. +.+.+.++.|.+++.++++.|.++ ...+..+.+.+..+.. ......+-.+...+++.||
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~-~e~~~~~~i~~~~~~~-~l~g~~sL~el~ali~~a~ 256 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGND-AEKQRAERIAEALPGA-VVLPKMSLAEVAALLAGAD 256 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCH-HHHHHHHHHHhhCCCC-eecCCCCHHHHHHHHHcCC
Confidence 44556666644567776 577777777766678888886553 2334445554443322 1122235566678999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
++|-+- .|..=+ |.|.|+|+|+--
T Consensus 257 l~I~~D----Sgp~Hl-Aaa~g~P~i~lf 280 (319)
T TIGR02193 257 AVVGVD----TGLTHL-AAALDKPTVTLY 280 (319)
T ss_pred EEEeCC----ChHHHH-HHHcCCCEEEEE
Confidence 999764 232223 678999999854
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=88.74 E-value=0.14 Score=46.40 Aligned_cols=44 Identities=18% Similarity=0.191 Sum_probs=29.5
Q ss_pred EccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc
Q 008154 442 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 442 ~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
..+|.++ +..+++.||++|.- +-+.|+.|++++|+|.|.....+
T Consensus 59 ~~~~~~~-m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~ 102 (167)
T PF04101_consen 59 VFGFVDN-MAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPG 102 (167)
T ss_dssp EECSSSS-HHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TT
T ss_pred EEechhh-HHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCC
Confidence 4455544 45799999998853 34579999999999999866555
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=88.20 E-value=9.7 Score=40.87 Aligned_cols=105 Identities=9% Similarity=-0.044 Sum_probs=58.9
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccc-cccccccCCCCCcceeEeCC----CCHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVE-NFNPFAREGSGEGTGWSFLP----LSEESM 522 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~-~~~~~~~~~~~~~~G~~~~~----~d~~~l 522 (576)
.++....+..+-+. +=..|.+||+.+|+|+|+.... .+...+. . -+.|..++. -+.+++
T Consensus 350 ~iL~h~~vg~FitH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~----------~g~gv~~~~~~~~~~~~~l 417 (481)
T PLN02992 350 EILAHQAVGGFLTH--CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDE----------LGIAVRSDDPKEVISRSKI 417 (481)
T ss_pred HHhCCcccCeeEec--CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHH----------hCeeEEecCCCCcccHHHH
Confidence 47887776333321 2236889999999999995432 2333332 2 245555533 267888
Q ss_pred HHHHHHHHHH-----hhhCHHHHHHHHHHHHh------hhCCHHHHHHHHHHHHHHh
Q 008154 523 LTALRFAIRT-----YREHKSSWEGLMRRGME------KDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 523 a~~i~~~l~~-----~~~~~~~~~~~~~~a~~------~~fs~~~~~~~y~~~y~~~ 568 (576)
++++.+++.+ +..+.+.+.+.++++++ ..-+.++++++....++++
T Consensus 418 ~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~~~~~ 474 (481)
T PLN02992 418 EALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRFLERV 474 (481)
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 8888888742 11123344444444442 1234455666666655543
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=87.94 E-value=11 Score=40.05 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=31.5
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
++.+|++|. +| .-|--+-+.++|+.|+.+|+.|+++++..
T Consensus 4 ~~~hvv~~P---~p---aqGHi~P~l~lAk~La~~G~~vT~v~t~~ 43 (449)
T PLN02173 4 MRGHVLAVP---FP---SQGHITPIRQFCKRLHSKGFKTTHTLTTF 43 (449)
T ss_pred CCcEEEEec---Cc---ccccHHHHHHHHHHHHcCCCEEEEEECCc
Confidence 345788884 34 35677778999999999999999998664
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=87.41 E-value=16 Score=38.88 Aligned_cols=131 Identities=7% Similarity=-0.056 Sum_probs=69.3
Q ss_pred CCCEEEEecccc---cccCHHHHHHHHHhhhcCCcEEEEE-eCCCh-hhHHHHHHHHHHhcCceEEEccCChhHHHHHHh
Q 008154 381 DCPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVML-GSGDP-QFESWMRDTEATYKDKYRGWVGFNVPISHRITA 455 (576)
Q Consensus 381 ~~~~i~~~Gr~~---~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 455 (576)
+..+++..|... +.+-+..++.+++.+ +.+++++ ..+.. ...+ ...++...+.. ..++-+. ..+++
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~---~~~~~~~~~~~-v~~w~PQ--~~iL~ 343 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPP---GYVERVSKQGK-VVSWAPQ--LEVLK 343 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCH---HHHHHhccCEE-EEecCCH--HHHhC
Confidence 345667777754 334455555555554 4466653 22210 1111 11122223332 2233222 14788
Q ss_pred cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc----cccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 456 ~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~----gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
..++..+-+. +--.|.+||+.+|+|+|+... ..+...+.+ .-+.|+-+...+.+++++++++++.
T Consensus 344 h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~---------~~g~g~~~~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 344 HQAVGCYLTH--CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVD---------VWKIGVRISGFGQKEVEEGLRKVME 412 (448)
T ss_pred CCccceEEec--CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHH---------HhCceeEeCCCCHHHHHHHHHHHhC
Confidence 8776443332 223688999999999998543 333333332 0145555544577888888888874
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=87.19 E-value=19 Score=38.83 Aligned_cols=40 Identities=13% Similarity=0.166 Sum_probs=31.7
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
++.+|+++. +| .-|--.=+.++|+.|+++|++|+++++..
T Consensus 4 ~~~hVvlvp---~p---a~GHi~P~L~LAk~L~~rG~~VT~vtt~~ 43 (482)
T PLN03007 4 EKLHILFFP---FM---AHGHMIPTLDMAKLFSSRGAKSTILTTPL 43 (482)
T ss_pred CCcEEEEEC---CC---ccccHHHHHHHHHHHHhCCCEEEEEECCC
Confidence 456899996 34 35666778999999999999999998653
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=86.54 E-value=11 Score=38.70 Aligned_cols=102 Identities=9% Similarity=0.005 Sum_probs=63.6
Q ss_pred CCCEEEEecccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhc-CceEEEccC-ChhHHHHHHhc
Q 008154 381 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF-NVPISHRITAG 456 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~ll~~ 456 (576)
+..+++..|.-.+.|++ +.+.+.++.|.+.+.+++++|...+...+..+.+.+... ..++.+.+. +-.++..+++.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~ 262 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDH 262 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHh
Confidence 45666676765577775 467777777766678888887643222233344444321 223333332 55666689999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
||++|-+- .|..=+ |.|.|+|+|+--
T Consensus 263 a~l~v~nD----SGp~Hl-AaA~g~P~v~lf 288 (352)
T PRK10422 263 AQLFIGVD----SAPAHI-AAAVNTPLICLF 288 (352)
T ss_pred CCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 99999764 233333 779999999843
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=86.00 E-value=32 Score=37.02 Aligned_cols=38 Identities=24% Similarity=0.258 Sum_probs=30.7
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
.+|+++. +| .-|--+=+.++|+.|+.+|..|+++++..
T Consensus 8 ~HVv~~P---fp---aqGHi~Pml~lA~~La~~G~~vT~v~T~~ 45 (480)
T PLN02555 8 VHVMLVS---FP---GQGHVNPLLRLGKLLASKGLLVTFVTTES 45 (480)
T ss_pred CEEEEEC---Cc---ccccHHHHHHHHHHHHhCCCeEEEEeccc
Confidence 4688874 34 46677778999999999999999998764
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=85.90 E-value=6.4 Score=38.84 Aligned_cols=105 Identities=16% Similarity=0.103 Sum_probs=65.1
Q ss_pred CEEEEecccccccC--HHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHh-cCceEEEcc-CChhHHHHHHhcCC
Q 008154 383 PLIGFIGRLDYQKG--IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVG-FNVPISHRITAGCD 458 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg--~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~ll~~~D 458 (576)
.+++..|.-.+.|. .+.+.+.++.|.+++++++++|..+ ..+..+.+.+.. ..++..+.+ .+..+...+++.||
T Consensus 123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~ 200 (279)
T cd03789 123 VVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARAD 200 (279)
T ss_pred EEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCC
Confidence 34444554445555 4678888888877788999998754 344444454433 223332333 24455668999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccc
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDT 494 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~ 494 (576)
++|-+- .|..-+ |.+.|+|+|+--.+..++.
T Consensus 201 l~I~~D----sg~~Hl-A~a~~~p~i~l~g~~~~~~ 231 (279)
T cd03789 201 LVVTND----SGPMHL-AAALGTPTVALFGPTDPAR 231 (279)
T ss_pred EEEeeC----CHHHHH-HHHcCCCEEEEECCCCccc
Confidence 999774 354445 4699999999644433433
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=85.64 E-value=2.6 Score=34.30 Aligned_cols=81 Identities=12% Similarity=0.132 Sum_probs=52.9
Q ss_pred EEEEeCCChhhHHHHHHHHHHhcCceEEE---ccCChhH--HHHHHhcCCEEEeCCCC---CCCcHHHHHHHHcCCceEE
Q 008154 414 FVMLGSGDPQFESWMRDTEATYKDKYRGW---VGFNVPI--SHRITAGCDILLMPSRF---EPCGLNQLYAMRYGTIPVV 485 (576)
Q Consensus 414 lii~G~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~ll~~~Dv~v~ps~~---E~~g~s~lEAma~G~pvIa 485 (576)
++|+|.-+. ....++...+.....+..+ .+..... .+..+..+|++|++.-+ ...-.+--+|-..|+|++-
T Consensus 2 vliVGG~~~-~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGRED-RERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCCcc-cHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 567777432 3444555555566676666 3343333 56788999999988763 3444555677888999999
Q ss_pred eCcccccccc
Q 008154 486 HATGGLRDTV 495 (576)
Q Consensus 486 t~~gg~~e~i 495 (576)
++..++..+.
T Consensus 81 ~~~~~~~~l~ 90 (97)
T PF10087_consen 81 SRSRGVSSLE 90 (97)
T ss_pred ECCCCHHHHH
Confidence 9876665443
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=85.30 E-value=7.8 Score=41.90 Aligned_cols=132 Identities=16% Similarity=0.085 Sum_probs=69.9
Q ss_pred CCCEEEEeccccc---ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcC
Q 008154 381 DCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~~---~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 457 (576)
+..+++..|.+.. .+-...++++++++ +.++++.-++.+. . .+..++ ....+-+. .++++..
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~---~~~~iW~~~~~~~--~-------~l~~n~-~~~~W~PQ--~~lL~hp 340 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL---PQRFIWKYEGEPP--E-------NLPKNV-LIVKWLPQ--NDLLAHP 340 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS---TTEEEEEETCSHG--C-------HHHTTE-EEESS--H--HHHHTST
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC---CCccccccccccc--c-------cccceE-EEeccccc--hhhhhcc
Confidence 4566777788753 12234466666665 4478876665311 1 112243 23444332 2578765
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCc----cccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHH
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIR 531 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~----gg~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~ 531 (576)
.+-++=+. +=-.+.+||+.+|+|+|+... ......+.+ .+.|...+.. +.+++.++|.+++.
T Consensus 341 ~v~~fitH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~----------~G~g~~l~~~~~~~~~l~~ai~~vl~ 408 (500)
T PF00201_consen 341 RVKLFITH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEE----------KGVGVVLDKNDLTEEELRAAIREVLE 408 (500)
T ss_dssp TEEEEEES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHH----------TTSEEEEGGGC-SHHHHHHHHHHHHH
T ss_pred cceeeeec--cccchhhhhhhccCCccCCCCcccCCccceEEEE----------EeeEEEEEecCCcHHHHHHHHHHHHh
Confidence 55433321 334688999999999999543 223333333 3456666544 46788888888875
Q ss_pred HhhhCHHHHHHH
Q 008154 532 TYREHKSSWEGL 543 (576)
Q Consensus 532 ~~~~~~~~~~~~ 543 (576)
|++-.++.
T Consensus 409 ----~~~y~~~a 416 (500)
T PF00201_consen 409 ----NPSYKENA 416 (500)
T ss_dssp ----SHHHHHHH
T ss_pred ----hhHHHHHH
Confidence 65443333
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=85.29 E-value=29 Score=35.55 Aligned_cols=169 Identities=10% Similarity=0.121 Sum_probs=106.9
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCC--ChhhHHHHHHHHH----HhcCceEEEccCCh-----hHHHH
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSG--DPQFESWMRDTEA----TYKDKYRGWVGFNV-----PISHR 452 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g--~~~~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~~~ 452 (576)
.|=|.|.+..-+-+....+..++.++.++.+||+-.. +.....+.+++.+ -.+.++++..+... +++..
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~a 235 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARA 235 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHH
Confidence 4556678888899999999999999999999998753 2222333333322 33556666555432 33334
Q ss_pred HHhcCCE--EEeCCCC----CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 453 ITAGCDI--LLMPSRF----EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 453 ll~~~Dv--~v~ps~~----E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
+=..+|+ +|.+-.. -+..+|.. .|.+.||+-...|..-|-++.|++.. -.+-+..-+|.+.+.+.+
T Consensus 236 Fk~~vdvg~vIlTKlDGhakGGgAlSaV--aaTksPIiFIGtGEhmdDlE~F~pk~------FvsrlLGmGDi~glvek~ 307 (483)
T KOG0780|consen 236 FKETVDVGAVILTKLDGHAKGGGALSAV--AATKSPIIFIGTGEHMDDLEPFDPKP------FVSRLLGMGDIEGLVEKV 307 (483)
T ss_pred HHHhhccceEEEEecccCCCCCceeeeh--hhhCCCEEEEecCccccccCCCChHH------HHHHHhccccHHHHHHHH
Confidence 4455555 4555442 24556666 46799999888776555555544322 334455677999988888
Q ss_pred HHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 008154 527 RFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
.++..+ ++++.. ++-.+-+|+...|.+++.++..
T Consensus 308 ~ev~~~--d~~el~----~kl~~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 308 QEVGKD--DAKELV----EKLKQGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHhhh--hHHHHH----HHHHhCCccHHHHHHHHHHHHh
Confidence 887621 223333 3323568999999988877654
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=85.15 E-value=23 Score=38.14 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=23.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
+|++|. +| .-|--+=+.+||+.|+.+|..++.++
T Consensus 5 hVv~~P---fp---aqGHi~P~l~LAk~La~~G~~~t~vt 38 (475)
T PLN02167 5 ELIFVP---FP---STGHILVTIEFAKRLINLDRRIHTIT 38 (475)
T ss_pred EEEEeC---Ch---hhhhHHHHHHHHHHHHhCCCCeEEEE
Confidence 677773 23 35677778999999999985443343
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=84.95 E-value=9.8 Score=37.98 Aligned_cols=99 Identities=13% Similarity=-0.033 Sum_probs=62.1
Q ss_pred CEEEEecccc---cccCHHHHHHHHHhhhcC-CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 383 PLIGFIGRLD---YQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 383 ~~i~~~Gr~~---~~Kg~~~ll~a~~~L~~~-~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
..|++.-|-. ..+..+.+.++++.+.++ +.+++++....+.+....+.+..........+...+.++...++++||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4555544431 223456777888877654 777766664433345556666655432212224446666668999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
++|-...+ +.+=|+++|+|+|+-
T Consensus 253 ~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 253 LVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred EEEEechH-----HHHHHHHcCCCEEEe
Confidence 88877664 677899999999975
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=84.33 E-value=33 Score=34.56 Aligned_cols=99 Identities=9% Similarity=0.015 Sum_probs=59.0
Q ss_pred CCEEEEecccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 382 CPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
..+++..|.-...|++ +.+.+.+++|.+.+.++++.|.++ ...+..+.+.+... .+......+-.+...+++.||+
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~-~e~~~~~~i~~~~~-~~~l~g~~sL~elaali~~a~l 256 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAE-HEEQRAKRLAEGFP-YVEVLPKLSLEQVARVLAGAKA 256 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCH-HHHHHHHHHHccCC-cceecCCCCHHHHHHHHHhCCE
Confidence 3443344433356665 467788888866677887763342 23444455544332 2222222355666689999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
+|-+- .|. +-=|.|.|+|+|+-=
T Consensus 257 ~I~nD----SGp-~HlA~A~g~p~valf 279 (322)
T PRK10964 257 VVSVD----TGL-SHLTAALDRPNITLY 279 (322)
T ss_pred EEecC----CcH-HHHHHHhCCCEEEEE
Confidence 99764 232 233789999999943
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=84.31 E-value=33 Score=36.62 Aligned_cols=40 Identities=18% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
...+|++|. +| .-|--+=+.++|+.|+.+|+.|+++++..
T Consensus 6 ~~~HVvlvP---fp---aqGHi~P~l~LAk~La~~G~~VT~v~T~~ 45 (451)
T PLN02410 6 ARRRVVLVP---VP---AQGHISPMMQLAKTLHLKGFSITIAQTKF 45 (451)
T ss_pred CCCEEEEEC---CC---ccccHHHHHHHHHHHHcCCCEEEEEeCcc
Confidence 346788884 24 34666778999999999999999998764
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=84.06 E-value=31 Score=37.13 Aligned_cols=39 Identities=18% Similarity=0.166 Sum_probs=29.6
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCC--CcEEEEEecC
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPRY 109 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G--~~V~vi~~~~ 109 (576)
+++|+++- +| .-|--+=+.++|+.|+.+| ..|+++++..
T Consensus 2 ~~hvvl~P---~p---aqGHi~P~l~LAk~La~~G~~~~vT~v~t~~ 42 (481)
T PLN02554 2 KIELVFIP---SP---GIGHLRPTVELAKLLVDSDDRLSITVIIIPS 42 (481)
T ss_pred ceEEEEeC---Cc---chhhHHHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 46788873 24 4567777899999999998 7888987653
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=83.98 E-value=27 Score=37.34 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=28.9
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCC--CcEEEEEecC
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPRY 109 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G--~~V~vi~~~~ 109 (576)
+|++|. +| .-|--+-+.++|+.|+.+| ..|++++...
T Consensus 5 hvv~~P---~p---~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~ 43 (468)
T PLN02207 5 ELIFIP---TP---TVGHLVPFLEFARRLIEQDDRIRITILLMKL 43 (468)
T ss_pred EEEEeC---Cc---chhhHHHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 577763 34 3577788899999999998 8999998665
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.63 E-value=28 Score=37.46 Aligned_cols=37 Identities=14% Similarity=-0.054 Sum_probs=28.5
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCC----CcEEEEEecC
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG----HRVMVVSPRY 109 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G----~~V~vi~~~~ 109 (576)
+|+++- +| .-|--+-+.++|+.|+.+| +.|++++...
T Consensus 5 HVVlvP---fp---aqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~ 45 (480)
T PLN00164 5 TVVLLP---VW---GSGHLMSMLEAGKRLLASSGGGALSLTVLVMPP 45 (480)
T ss_pred EEEEeC---Cc---chhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCC
Confidence 677773 23 4577788899999999986 7899998654
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=83.38 E-value=21 Score=36.38 Aligned_cols=102 Identities=11% Similarity=0.031 Sum_probs=63.0
Q ss_pred CCCEEEEecccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcC-ceEEEccC-ChhHHHHHHhc
Q 008154 381 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKD-KYRGWVGF-NVPISHRITAG 456 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~ll~~ 456 (576)
+..+++..|.-.+.|.. +...+.+++|.+++.+++++|...+...+..+.+.+.... +++.+.+. +..++..+++.
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~ 260 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDH 260 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHh
Confidence 34555566654466665 5666677677656788999986533233344555544322 23333333 55666789999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
||++|-+- .|..=+ |.|.|+|+|+--
T Consensus 261 a~l~Vs~D----SGp~Hl-AaA~g~p~v~Lf 286 (344)
T TIGR02201 261 ARLFIGVD----SVPMHM-AAALGTPLVALF 286 (344)
T ss_pred CCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 99999763 233323 789999999943
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=83.30 E-value=37 Score=36.17 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=33.0
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
..+++|++|. +| .-|--+-+.++|+.|+.+|+.|+++++..
T Consensus 3 ~~~~Hvvl~P---~p---aqGHi~P~l~LAk~La~~g~~vT~~tt~~ 43 (453)
T PLN02764 3 GLKFHVLMYP---WF---ATGHMTPFLFLANKLAEKGHTVTFLLPKK 43 (453)
T ss_pred CCCcEEEEEC---Cc---ccccHHHHHHHHHHHHhCCCEEEEEeCcc
Confidence 3567899884 24 45777888999999999999999998764
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=83.28 E-value=20 Score=38.29 Aligned_cols=133 Identities=9% Similarity=-0.014 Sum_probs=67.3
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEE-eCCC-hhhHHHHHHHHHHh-cCceEEEccCChhHHHHHHhcC
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVML-GSGD-PQFESWMRDTEATY-KDKYRGWVGFNVPISHRITAGC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~ 457 (576)
...+++..|..... ..+.+-+.+.-|...+.+|+++ +... +... ..+.+.. ..+.. ..++-+.. .+++.+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~---~~~~~~~~~~~g~-v~~w~PQ~--~iL~h~ 341 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNV---QVLQEMVKEGQGV-VLEWSPQE--KILSHM 341 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccch---hhHHhhccCCCeE-EEecCCHH--HHhcCc
Confidence 44666667876532 3344444444454446666664 3221 1111 1122221 12221 22332322 478888
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeCC------CCHHHHHHHHH
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLP------LSEESMLTALR 527 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~~------~d~~~la~~i~ 527 (576)
++..+-+. -++ .|.+||+++|+|+|+-... .+...+.+ .-+.|..+.. -+.++++++++
T Consensus 342 ~vg~FitH-~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~---------~~g~G~~l~~~~~~~~~~~~~l~~av~ 410 (456)
T PLN02210 342 AISCFVTH-CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVD---------VFGIGVRMRNDAVDGELKVEEVERCIE 410 (456)
T ss_pred CcCeEEee-CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHH---------HhCeEEEEeccccCCcCCHHHHHHHHH
Confidence 74433332 122 4789999999999995432 22222222 0145555431 26788888888
Q ss_pred HHHH
Q 008154 528 FAIR 531 (576)
Q Consensus 528 ~~l~ 531 (576)
+++.
T Consensus 411 ~~m~ 414 (456)
T PLN02210 411 AVTE 414 (456)
T ss_pred HHhc
Confidence 8874
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=83.02 E-value=11 Score=38.46 Aligned_cols=99 Identities=16% Similarity=0.082 Sum_probs=67.2
Q ss_pred CCEEEEec-ccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 382 CPLIGFIG-RLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 382 ~~~i~~~G-r~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
..+++..| .....|+. +.+.+.++.|.++..++++.|.. ...+..+.+.......+.....-+-.++..++..||
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~--~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~ 253 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP--DEEERAEEIAKGLPNAVILAGKTSLEELAALIAGAD 253 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh--HHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCC
Confidence 45566667 66677775 46777777777777889999987 356666777766553322122224455668999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
++|-+. .|..=+ |.|.|+|+|+--
T Consensus 254 l~I~~D----Sg~~Hl-AaA~~~P~I~iy 277 (334)
T COG0859 254 LVIGND----SGPMHL-AAALGTPTIALY 277 (334)
T ss_pred EEEccC----ChHHHH-HHHcCCCEEEEE
Confidence 999764 344444 789999999953
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=82.81 E-value=10 Score=37.31 Aligned_cols=102 Identities=10% Similarity=-0.068 Sum_probs=56.1
Q ss_pred CCCCEEEEecccccc-------cCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHH--HHHHHHHHh-cCceEEEccCCh
Q 008154 380 PDCPLIGFIGRLDYQ-------KGIDLIRLAAPEILA--DDIQFVMLGSGDPQFES--WMRDTEATY-KDKYRGWVGFNV 447 (576)
Q Consensus 380 ~~~~~i~~~Gr~~~~-------Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~--~~~~~~~~~-~~~~~~~~~~~~ 447 (576)
.++.+|++....... .....+++.+..+.+ ++.+++| +-||.... ....+.+.. ..+++.... +.
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvv--K~HP~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 191 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVV--KPHPDERGGNKYSYLEELPNLPNVVIIDD-DV 191 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEE--EECchhhCCCChhHhhhhhcCCCeEEECC-CC
Confidence 355667777665543 234455555555544 3555554 44442110 011222221 223332221 22
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
....++..||.++-- .+++++||+.+|+||++-....
T Consensus 192 -~~~~Ll~~s~~Vvti-----nStvGlEAll~gkpVi~~G~~~ 228 (269)
T PF05159_consen 192 -NLYELLEQSDAVVTI-----NSTVGLEALLHGKPVIVFGRAF 228 (269)
T ss_pred -CHHHHHHhCCEEEEE-----CCHHHHHHHHcCCceEEecCcc
Confidence 234789999998754 3579999999999999965543
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=82.42 E-value=5.7 Score=38.69 Aligned_cols=90 Identities=16% Similarity=0.248 Sum_probs=58.8
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEE-EEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFV-MLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~li-i~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
+++..|.-+ .|+ +.++.++.|.+.++.+- ++|.++|..+...+...+..+.+ .+. +.+.+..++..||..+.
T Consensus 161 ilI~lGGsD-pk~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~~l~k~~~~~~~i~--~~~--~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGSD-PKN--LTLKVLAELEQKNVNLHIVVGSSNPTLKNLRKRAEKYPNIN--LYI--DTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCCC-hhh--hHHHHHHHhhccCeeEEEEecCCCcchhHHHHHHhhCCCee--eEe--cchhHHHHHHhcchhee
Confidence 445555323 343 45677777766554443 36777777777777666554433 344 23445689999999986
Q ss_pred CCCCCCCcHHHHHHHHcCCceEE
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVV 485 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIa 485 (576)
. -|.++.||+..|+|.++
T Consensus 234 A-----aGstlyEa~~lgvP~l~ 251 (318)
T COG3980 234 A-----AGSTLYEALLLGVPSLV 251 (318)
T ss_pred c-----cchHHHHHHHhcCCceE
Confidence 4 58899999999999444
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=82.32 E-value=24 Score=37.70 Aligned_cols=134 Identities=12% Similarity=0.010 Sum_probs=69.0
Q ss_pred CCCEEEEecccc--cccCHHHHHHHHHhhhcCCcEEEEEeCCC--------hhhHHH---HHHHHHHhcCceEEEccCCh
Q 008154 381 DCPLIGFIGRLD--YQKGIDLIRLAAPEILADDIQFVMLGSGD--------PQFESW---MRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 381 ~~~~i~~~Gr~~--~~Kg~~~ll~a~~~L~~~~~~lii~G~g~--------~~~~~~---~~~~~~~~~~~~~~~~~~~~ 447 (576)
+..+++..|.+. +.+-+..+..+++.+ +..|+++=..+ ...... .+...++...+.. ..++-+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s---~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~-v~~W~P 336 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEG---KRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGM-IVSWCS 336 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHc---CCCeEEEEecCcccccccccccccccccchhHHHhccCCeE-EEeeCC
Confidence 456666668765 455666677777666 33555532210 000000 1222222333322 223322
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeC-----CCC
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFL-----PLS 518 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~-----~~d 518 (576)
.. .+++...+-++-+. +=..+.+||+.+|+|+|+-... .....+.+ .-+.|+-+. .-+
T Consensus 337 Q~--~iL~h~~vg~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~---------~~~~G~~~~~~~~~~~~ 403 (455)
T PLN02152 337 QI--EVLRHRAVGCFVTH--CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEE---------IWKTGVRVRENSEGLVE 403 (455)
T ss_pred HH--HHhCCcccceEEee--CCcccHHHHHHcCCCEEeccccccchHHHHHHHH---------HhCceEEeecCcCCcCc
Confidence 22 57888887555443 2235889999999999985432 22222211 002344432 125
Q ss_pred HHHHHHHHHHHHH
Q 008154 519 EESMLTALRFAIR 531 (576)
Q Consensus 519 ~~~la~~i~~~l~ 531 (576)
.+++++++.+++.
T Consensus 404 ~e~l~~av~~vm~ 416 (455)
T PLN02152 404 RGEIRRCLEAVME 416 (455)
T ss_pred HHHHHHHHHHHHh
Confidence 7888888888885
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=80.61 E-value=20 Score=36.65 Aligned_cols=98 Identities=16% Similarity=0.115 Sum_probs=60.0
Q ss_pred CCEEEEecc-cccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcC----ceEEEccC-ChhHHHHH
Q 008154 382 CPLIGFIGR-LDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKD----KYRGWVGF-NVPISHRI 453 (576)
Q Consensus 382 ~~~i~~~Gr-~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~l 453 (576)
..+++..|. ..+.|.+ +.+.+.+++|.+.+.++++.|..+ ..+..+.+.+.... +++.+.+- +-.++..+
T Consensus 181 ~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~al 258 (348)
T PRK10916 181 PIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRNLAGETQLEQAVIL 258 (348)
T ss_pred CEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceeeccCCCCHHHHHHH
Confidence 344455554 3467775 456777777765678889988653 33444444433221 22333332 45566689
Q ss_pred HhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 454 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 454 l~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
++.||++|-+- .|..=+ |.|.|+|+|+-
T Consensus 259 i~~a~l~I~nD----TGp~Hl-AaA~g~P~val 286 (348)
T PRK10916 259 IAACKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_pred HHhCCEEEecC----ChHHHH-HHHhCCCEEEE
Confidence 99999999663 233323 78999999984
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 576 | ||||
| 3vue_A | 536 | Crystal Structure Of Rice Granule Bound Starch Synt | 8e-91 | ||
| 3d1j_A | 477 | Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408 | 1e-71 | ||
| 2qzs_A | 485 | Crystal Structure Of Wild-Type E.Coli Gs In Complex | 5e-71 | ||
| 3cop_A | 485 | Crystal Structure Of E.Coli Gs Mutant E377a In Comp | 3e-70 | ||
| 1rzu_A | 485 | Crystal Structure Of The Glycogen Synthase From A. | 7e-70 | ||
| 1rzv_A | 485 | Crystal Structure Of The Glycogen Synthase From Agr | 3e-67 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 2e-19 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 2e-19 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 3e-19 | ||
| 2bfw_A | 200 | Structure Of The C Domain Of Glycogen Synthase From | 4e-15 | ||
| 3okc_A | 394 | Crystal Structure Of Corynebacterium Glutamicum Pim | 4e-05 | ||
| 3oka_A | 381 | Crystal Structure Of Corynebacterium Glutamicum Pim | 4e-05 |
| >pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 | Back alignment and structure |
|
| >pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s) Length = 477 | Back alignment and structure |
|
| >pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) Length = 485 | Back alignment and structure |
|
| >pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso Length = 485 | Back alignment and structure |
|
| >pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485 | Back alignment and structure |
|
| >pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) Length = 485 | Back alignment and structure |
|
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
|
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
|
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
|
| >pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200 | Back alignment and structure |
|
| >pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394 | Back alignment and structure |
|
| >pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 | Back alignment and structure |
|---|
Score = 659 bits (1703), Expect = 0.0
Identities = 166/514 (32%), Positives = 252/514 (49%), Gaps = 35/514 (6%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
++ V +E P KTGGL DV G+LP A A G V+ P + + D
Sbjct: 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF------PDIRRGVTDAQ 55
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDING-AFGDNQFRYTLL 184
+ F G + + GV +D P RPG+PY D N A+ DN R+ LL
Sbjct: 56 VVSRRDTFAGHITL--LFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALL 113
Query: 185 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 244
+ E L + +DWHAGL P LA++ RP A+S+ +HNL
Sbjct: 114 GWVGAEMASGLDPFW----RPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNL 163
Query: 245 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304
++QG+ A ++ LP ++ H L+ ++ LK + AD + VS
Sbjct: 164 AYQGMFYAHHMNDIQLPWSFF-----------NIHGLEFNGQISFLKAGLYYADHITAVS 212
Query: 305 KGYSWEITTVEGGYGLHEILSSR--KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 362
Y+ EIT + YG+ +L R + L+G+ NG+D W+P +D +AS Y+ D L
Sbjct: 213 PTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED 272
Query: 363 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP 422
K + K LQ +GL + PL + RL QKG+DL+ A P +L Q +LG+GDP
Sbjct: 273 KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDP 332
Query: 423 QFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI 482
+ A Y + +G++ SHRI G D++L+PSRFEPCGL QLY ++YGT+
Sbjct: 333 VLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL 392
Query: 483 PVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542
P+V TGGL DTV + + G +G+ F + S+L A+R A + S W
Sbjct: 393 PLVRRTGGLADTVSDCSLEN-LADGVASGFVFEDSNAWSLLRAIRRAFVLWS-RPSLWRF 450
Query: 543 LMRRGMEKDYTWENAAIQYEQVFEWASIDPPYIH 576
+ R+ M D++W+ AA Y +++ ++ + H
Sbjct: 451 VQRQAMAMDFSWQVAAKSYRELYYRLKLEHHHHH 484
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 | Back alignment and structure |
|---|
Score = 652 bits (1685), Expect = 0.0
Identities = 171/506 (33%), Positives = 249/506 (49%), Gaps = 36/506 (7%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
N++ V++E P KTGGL DV G+LP+AL A G R + P Y + +
Sbjct: 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYP---------AVKAAVT 52
Query: 127 CCMKICCFGGE--QEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDING-AFGDNQFRYT 182
+K F ++ E +D + +D P+Y R G PY G + DN R+
Sbjct: 53 DPVKCFEFTDLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFA 112
Query: 183 LLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIH 242
L AA + G + +DW A + PV + P S+L IH
Sbjct: 113 ALSLAAARIGAGVLPGW----RPDMVHAHDWQAAMTPVYMRYAETPE-----IPSLLTIH 163
Query: 243 NLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302
N++ QG A + L LP+ +G ++ V+ LKG + TA L T
Sbjct: 164 NIAFQGQFGANIFSKLALPAHAFGM-----------EGIEYYNDVSFLKGGLQTATALST 212
Query: 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 362
VS Y+ EI T E G GL ++ SR VL+GI NGID WNP++D I +YS +L
Sbjct: 213 VSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKN 272
Query: 363 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP 422
+ K A+ + + PL I RL +QKGIDL+ A EI++ + V+LG+GD
Sbjct: 273 RALNKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV 331
Query: 423 QFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI 482
E + + + + +G+N P+SH + AGCD +++PSRFEPCGL QLYA+RYG I
Sbjct: 332 ALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCI 391
Query: 483 PVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542
PVV TGGL DTV + N A S TG F P++ + + A+R +R Y W
Sbjct: 392 PVVARTGGLADTVIDANHAAL-ASKAATGVQFSPVTLDGLKQAIRRTVRYYH-DPKLWTQ 449
Query: 543 LMRRGMEKDYTWENAAIQYEQVFEWA 568
+ + GM+ D +WE +A Y ++
Sbjct: 450 MQKLGMKSDVSWEKSAGLYAALYSQL 475
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 | Back alignment and structure |
|---|
Score = 532 bits (1372), Expect = 0.0
Identities = 106/508 (20%), Positives = 182/508 (35%), Gaps = 87/508 (17%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
++ + E P K GGL + ++ ALA+ GH V+V +P + G E
Sbjct: 4 KVLLLGFEFLPV-KVGGLAEALTAISEALASLGHEVLVFTPSH--GRFQGEEIG------ 54
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCY 186
KI FG E ++ +E R + + YG + +
Sbjct: 55 ---KIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSED-VYGP---GWDGLIRKAVTFGR 107
Query: 187 AACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSH 246
A+ L + +DWH L+ ++ ++ IH L+
Sbjct: 108 ASVLLLNDLLREEPLPD---VVHFHDWHTVFAGALIKKYFKI-------PAVFTIHRLNK 157
Query: 247 QGVEPAATYKNLGLPS-EWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305
+ PA + GL Y ++ AD + TVS+
Sbjct: 158 SKL-PAFYFHEAGLSELAPYPD-------------------IDPEHTGGYIADIVTTVSR 197
Query: 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQ 365
GY + +G + + + + NGID + WN S + +
Sbjct: 198 GYLIDE------WGF---FRNFEGKITYVFNGIDCSFWNESYLTG-----------SRDE 237
Query: 366 CKIALQKELGLPIRPDCPLIGFIGRLDY-QKGIDLIRLAAPEILAD----DIQFVMLGSG 420
K +L + G+ FIGR D QKG+D++ A + + +++F+++G G
Sbjct: 238 RKKSLLSKFGMDEGVT---FMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG 294
Query: 421 DPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYG 480
DP+ E W R E + + + + D +++PS FEP GL L AM G
Sbjct: 295 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 354
Query: 481 TIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSW 540
IP+ A GGLRD + TG + A+ A+ R S
Sbjct: 355 AIPIASAVGGLRDIIT-----------NETGILVKAGDPGELANAILKALELSRSDL-SK 402
Query: 541 EGLMRRGMEKDYTWENAAIQYEQVFEWA 568
+ ++WE +A +Y + + +
Sbjct: 403 FRENCKKRAMSFSWEKSAERYVKAYTGS 430
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = e-101
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 33/227 (14%)
Query: 333 GITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLD 392
G NGID + WN S + + K +L + G+ + FIGR D
Sbjct: 1 GSHNGIDCSFWNES-----------YLTGSRDERKKSLLSKFGMD---EGVTFMFIGRFD 46
Query: 393 Y-QKGIDLIRLAAPEILAD----DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447
QKG+D++ A + + +++F+++G GDP+ E W R E + + +
Sbjct: 47 RGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSR 106
Query: 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSG 507
+ D +++PS FEP GL L AM G IP+ A GGLRD +
Sbjct: 107 EFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT----------- 155
Query: 508 EGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTW 554
TG + A+ A+ R ++ ++
Sbjct: 156 NETGILVKAGDPGELANAILKALELSRSD---LSKFRENCKKRAMSF 199
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-25
Identities = 85/522 (16%), Positives = 146/522 (27%), Gaps = 138/522 (26%)
Query: 67 NIVFVTAEAAPYS-----KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTL 121
+ ++ +P +GG+ S LA +G V + +
Sbjct: 22 RVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV---- 77
Query: 122 AKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY 181
E + + PY + +
Sbjct: 78 -----------------------RVAENLR-------VINIAAGPYEGL---SKEELPTQ 104
Query: 182 TLLCYAACEAPLVLPLGGFTYGEKCIFLV--NDWHAGLVPVLLASKYR-PHGVYKDARSI 238
+ + L+ + W +G V LL +R P I
Sbjct: 105 LAAFTGGMLSFTRREKVTYD-------LIHSHYWLSGQVGWLLRDLWRIPL--------I 149
Query: 239 LVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTAD 298
H L A KN + + + + AD
Sbjct: 150 HTAHTL--------AAVKNS-----YRDDSDTPESE----------ARRICEQQLVDNAD 186
Query: 299 RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSID 358
L + E+ + Y R SV ++ G D+ ++P +D
Sbjct: 187 VLAVNT---QEEMQDLMHHYDADP---DRISV---VSPGADVELYSPGNDRATE------ 231
Query: 359 DLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEILAD--DIQFV 415
++ELG+P ++ F+GRL KG LI+ A + D
Sbjct: 232 ----------RSRRELGIP--LHTKVVAFVGRLQPFKGPQVLIK-AVAALFDRDPDRNLR 278
Query: 416 MLGSGDPQFESWMRDTEATYKDKY--RGWVGFNVPISH----RITAGCDILLMPSRFEPC 469
++ G P + DT ++ + F P + DI+ +PS E
Sbjct: 279 VIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESF 338
Query: 470 GLNQLYAMRYGTIPVV-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528
GL + A GT PV+ GGL V GE TG S + AL
Sbjct: 339 GLVAMEAQASGT-PVIAARVGGLPIAVAE---------GE-TGLLVDGHSPHAWADALAT 387
Query: 529 AIRTYREHKSSWEGLMRRGME--KDYTWENAAIQYEQVFEWA 568
+ + + +E + ++W A Q ++ A
Sbjct: 388 LLD----DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDA 425
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 6e-21
Identities = 50/286 (17%), Positives = 105/286 (36%), Gaps = 57/286 (19%)
Query: 288 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSS 347
N+++ I +D + VS E HE++ K + + N ID +
Sbjct: 148 NLIRFGIEQSDVVTAVSHSLINE---------THELVKPNKDIQT-VYNFIDERVYFKRD 197
Query: 348 DEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPE 406
L+KE G+ ++ I K + +++ A +
Sbjct: 198 MT-------------------QLKKEYGIS--ESEKILIHISNFRKVKRVQDVVQ-AFAK 235
Query: 407 ILAD-DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSR 465
I+ + D + +++G G P+F + ++ + + + ++G + A D++L+ S
Sbjct: 236 IVTEVDAKLLLVGDG-PEFCTILQLVKNLHIEDRVLFLGK-QDNVAELLAMSDLMLLLSE 293
Query: 466 FEPCGLNQLYAMRYGTIPVVHAT--GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESML 523
E GL L AM G P + T GG+ + +++ G+ TG+ +
Sbjct: 294 KESFGLVLLEAMACGV-PCI-GTRVGGIPEVIQH---------GD-TGYLCEVGDTTGVA 341
Query: 524 TALRFAIRTYREHKSSWEGLMRRGME---KDYTWENAAIQYEQVFE 566
+ + + + R E + + E QYE ++
Sbjct: 342 DQAIQLL----KDEELHRNMGERARESVYEQFRSEKIVSQYETIYY 383
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 93.3 bits (232), Expect = 2e-20
Identities = 68/384 (17%), Positives = 125/384 (32%), Gaps = 81/384 (21%)
Query: 211 NDWHAGLVPVLLASKYR-PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALE 269
+ GL VLL + P H+L A + L + + + ++
Sbjct: 127 HYGDGGLAGVLLKNIKGLPF--------TFTGHSLG------AQKMEKLNVNTSNFKEMD 172
Query: 270 WVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKS 329
F R A + AD+++ + + + + G + K
Sbjct: 173 ERFKFHRRIIAERL---------TMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKF 223
Query: 330 VLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIG 389
+ I G++ ++ + I + + L+++LG R + P I
Sbjct: 224 SV--IPPGVNTRVFDGEYGDKIKAKITKY-----------LERDLGSE-RMELPAIIASS 269
Query: 390 RLDYQKGID-LIRLAAPEI--LADDIQFVMLGSG--DPQFESWMRDTEATYK-------- 436
RLD +K L+ A + L D V+ G +P + E
Sbjct: 270 RLDQKKNHYGLVE-AYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELI 328
Query: 437 DKY--RGWVGFNVPISHR--------ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV- 485
D RG V S + + + + + S +EP GL + AM G P V
Sbjct: 329 DNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVV 387
Query: 486 HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMR 545
GG + ++ G+ G P E + + E + +W
Sbjct: 388 TRNGGPAEILDG---------GK-YGVLVDPEDPE----DIARGLLKAFESEETWSAYQE 433
Query: 546 RGME---KDYTWENAAIQYEQVFE 566
+G + + YTW+ A Y +V +
Sbjct: 434 KGKQRVEERYTWQETARGYLEVIQ 457
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 1e-19
Identities = 63/326 (19%), Positives = 108/326 (33%), Gaps = 74/326 (22%)
Query: 264 WYGALEWVFPTWARTHALDTGEAVN-----VLKGAIVTADRLLTVSKGYSWEITTVEGGY 318
A TH + G ++ L+ D L +S + + + +
Sbjct: 103 GTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYIS---QYTLRRFKSAF 159
Query: 319 GLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPI 378
G H + +G+D+ + P++ E K A +K+LG
Sbjct: 160 GSHP----TFEH---LPSGVDVKRFTPATPED----------------KSATRKKLGFT- 195
Query: 379 RPDCPLIGFIGRLDYQKGID-LIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATY 435
P+I RL +KG D LI+ A P+++A D Q +++GSG T
Sbjct: 196 -DTTPVIACNSRLVPRKGQDSLIK-AMPQVIAARPDAQLLIVGSGR------YESTLRRL 247
Query: 436 KDKYRGWVGFNVPISH----RITAGCDILLMPSR-------FEPCGLNQLYAMRYGTIPV 484
V F + + A DI MP+R E G+ L A G PV
Sbjct: 248 ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-PV 306
Query: 485 V-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543
+ +GG +TV TG + L + + +
Sbjct: 307 IAGTSGGAPETVT-----------PATGLVVEGSDVD----KLSELLIELLDDPIRRAAM 351
Query: 544 MRRG---MEKDYTWENAAIQYEQVFE 566
G +E +++WE + + +
Sbjct: 352 GAAGRAHVEAEWSWEIMGERLTNILQ 377
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 90.0 bits (223), Expect = 5e-19
Identities = 58/381 (15%), Positives = 116/381 (30%), Gaps = 56/381 (14%)
Query: 211 NDWHAGLVPVLLASKYR-PHGVYKDARSILVIHNL----SHQGVEPAATYKNLGLPSEWY 265
N LV LLA K + H L + S +
Sbjct: 414 NYSDGNLVASLLAHKLGVTQ--------CTIAHALEKTKYPDSDIYWKKLDDKYHFSCQF 465
Query: 266 GALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS 325
A + E A TV + S T+ G Y + +
Sbjct: 466 TADIFAMNHTDFIITSTFQEI----------AGSKETVGQYESHTAFTLPGLYRVVHGID 515
Query: 326 SRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385
N ++ G D++ + P ++E ++ + + ++ L + P++
Sbjct: 516 VFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPIL 575
Query: 386 GFIGRLDYQKGID-LIRLAAPEI--LADDIQFVMLGSGDPQFES-------WMRDTEATY 435
+ RLD K + L+ + L + V++G + + +
Sbjct: 576 FTMARLDRVKNLSGLVE-WYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIE 634
Query: 436 KDKYRGWVGFNVPISHR---------ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 486
+ K G + R I + P+ +E GL + AM G
Sbjct: 635 EYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 694
Query: 487 ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRR 546
GG + + + G+ +G+ P + L +E S W+ + +
Sbjct: 695 CKGGPAEIIVH---------GK-SGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKG 744
Query: 547 GME---KDYTWENAAIQYEQV 564
G++ + YTW+ + + +
Sbjct: 745 GLQRIEEKYTWQIYSQRLLTL 765
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 5e-18
Identities = 42/248 (16%), Positives = 82/248 (33%), Gaps = 49/248 (19%)
Query: 334 ITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDY 393
+ ID + + + + P+ P+I + R D
Sbjct: 199 MPPSIDPLSEKNVELKQTEILR--------------ILERFDVD--PEKPIITQVSRFDP 242
Query: 394 QKGID-LIRLAAPEILAD--DIQFVMLGSG---DPQFESWMRDTEATYKDKYRG-----W 442
KGI +I ++ +Q +++G DP+ + T + Y
Sbjct: 243 WKGIFDVIE-IYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNL 301
Query: 443 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV-HATGGLRDTVENFNPF 501
+G + + D++L S E GL AM G PV+ A GG++ + +
Sbjct: 302 IGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGGIKFQIVD---- 356
Query: 502 AREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGME---KDYTWENAA 558
GE TG FL + + + + +H + + + E K++
Sbjct: 357 -----GE-TG--FLVRDANEAVEVVLYLL----KHPEVSKEMGAKAKERVRKNFIITKHM 404
Query: 559 IQYEQVFE 566
+Y +
Sbjct: 405 ERYLDILN 412
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 3e-16
Identities = 33/290 (11%), Positives = 70/290 (24%), Gaps = 73/290 (25%)
Query: 297 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYS 356
+ +L+ ++ +I + Y R + + GI +
Sbjct: 137 STKLMMLT---DKQIADFQKHYQTEP---ERFQI---LPPGIYPDRKYSEQIPNSRE--- 184
Query: 357 IDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEILAD--DIQ 413
+++ G+ L+ +G +KG+D I A +
Sbjct: 185 ------------IYRQKNGIK--EQQNLLLQVGSDFGRKGVDRSIE-ALASLPESLRHNT 229
Query: 414 FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT------------AGCDILL 461
+ + D K+ + + + A D+LL
Sbjct: 230 LLFVVGQDKP-------------RKFEALAE-KLGVRSNVHFFSGRNDVSELMAAADLLL 275
Query: 462 MPSRFEPCGLNQLYAMRYGTIPVV-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEE 520
P+ E G+ L A+ G PV+ A G + + G +
Sbjct: 276 HPAYQEAAGIVLLEAITAGL-PVLTTAVCGYAHYIAD---------AN-CGTVIAEPFSQ 324
Query: 521 SMLTALRFAIRTYREHKSSWEGLMRRGME--KDYTWENAAIQYEQVFEWA 568
L +R + + +
Sbjct: 325 EQLNE---VLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGG 371
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 9e-14
Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 26/184 (14%)
Query: 383 PLIGFIGRLDYQKGID-LIRLAAPEI-LADDIQFVMLGSGDPQFESWMRDTEATYKDKYR 440
I +GR +K LI+ A DI ++ G G P + +
Sbjct: 3 FKIAMVGRYSNEKNQSVLIK-AVALSKYKQDIVLLLKGKG-PDEKKIKLLAQKLGVKAEF 60
Query: 441 GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV--HATGGLRDTVENF 498
G+V N + I C + + + E + L A+ G +PV+ R
Sbjct: 61 GFVNSNELL--EILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFA--- 115
Query: 499 NPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGME--KDYTWEN 556
F P + + L I + E+K E + + +YT EN
Sbjct: 116 ---------LDERSLFEPNNAK----DLSAKIDWWLENKLERERMQNEYAKSALNYTLEN 162
Query: 557 AAIQ 560
+ IQ
Sbjct: 163 SVIQ 166
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 8e-12
Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 21/159 (13%)
Query: 378 IRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD--PQFESWMRDTEATY 435
+ + R+ +K I+L ++ D + ++G E + R
Sbjct: 19 FKCYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIA 76
Query: 436 KDK--YRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV-HATGGLR 492
D + G V I + C LL ++ E GL + AM G PV+ GG +
Sbjct: 77 PDNVKFLGSVSEEELIDL--YSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNEGGFK 133
Query: 493 DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531
+TV N + TG+ + ++ A++ +
Sbjct: 134 ETVIN---------EK-TGY-LVNADVNEIIDAMKKVSK 161
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 66.0 bits (160), Expect = 9e-12
Identities = 34/218 (15%), Positives = 66/218 (30%), Gaps = 26/218 (11%)
Query: 372 KELGLPIRPDCPLIGFIGRLDYQKGI-DLIRLAA------PEILADDIQFVMLGSGDPQF 424
K +GL D L + R +K + + AA P+ + S
Sbjct: 174 KLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLH 233
Query: 425 ESWMRDTEATYKDKYRGWVGFNVPISHRIT--------AGCDILLMPSRFEPCGLNQLYA 476
+R+ A+ D + + +T CD+++ S E GL
Sbjct: 234 SIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEG 293
Query: 477 MRYGTIPVVHATGGLRDTVENFNPF-------AREGSGEGTGWSFLPLSEESMLTALRFA 529
G ++ A GG D + +G G + + ++ A F
Sbjct: 294 AVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFF 353
Query: 530 I-RTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 566
R+ ++ ++ TW++ + F
Sbjct: 354 KDEKNRKEYGK---RVQDFVKTKPTWDDISSDIIDFFN 388
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-11
Identities = 40/202 (19%), Positives = 73/202 (36%), Gaps = 35/202 (17%)
Query: 377 PIRPDCPLIGFIGRLDY-QKGID-LIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTE 432
+ + F+GR D +KG+ L+ A P+++A D++ +++G GD +R+
Sbjct: 203 GYPREGRTVLFLGRYDEPRKGMAVLLA-ALPKLVARFPDVEILIVGRGDED---ELREQA 258
Query: 433 ATYKDKYRGWVGFNVPISH----RITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVV-H 486
R ++G + D+ P E G+ + AM GT VV
Sbjct: 259 GDLAGHLR-FLGQ---VDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT-AVVAS 313
Query: 487 ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRR 546
R + + G+ G + + A+ E G + R
Sbjct: 314 DLDAFRRVLAD---------GD-AGRLVPVDDAD----GMAAALIGILEDDQLRAGYVAR 359
Query: 547 GMEK--DYTWENAAIQYEQVFE 566
E+ Y W + Q +V+E
Sbjct: 360 ASERVHRYDWSVVSAQIMRVYE 381
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 6e-11
Identities = 36/197 (18%), Positives = 56/197 (28%), Gaps = 39/197 (19%)
Query: 383 PLIGFIGRLDYQKGID-LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 441
+ F+GR+ KG A A + V+ G + + Y
Sbjct: 163 DFLLFMGRVSPHKGALEAAAFAH----ACGRRLVLAGPAWE--PEYFDEITRRYGSTVE- 215
Query: 442 WVGFNVPISHRIT--AGCDILLMPSRF----------EPCGLNQLYAMRYGTIPVVHATG 489
+G V R+ A +L S+ EP A GT V G
Sbjct: 216 PIGE-VGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG 274
Query: 490 GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGME 549
L + V + G G G F P L L + +RR
Sbjct: 275 CLAEIVPS------VGEVVGYGTDFAPDEARRTLAGLPASDE------------VRRAAV 316
Query: 550 KDYTWENAAIQYEQVFE 566
+ + A +Y + +
Sbjct: 317 RLWGHVTIAERYVEQYR 333
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 1e-10
Identities = 47/320 (14%), Positives = 91/320 (28%), Gaps = 47/320 (14%)
Query: 153 VFVDHPS-YHRPGNPYGDINGAFG-------DNQFRYTLLCYAACEAPLVLPLGGFTYGE 204
+ D S GD+ G LL Y A + +
Sbjct: 124 ILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTV--AWFLGEVAHLDSQH 181
Query: 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEW 264
+ ++W AG+ L + D +I H Y ++
Sbjct: 182 AIVAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGR------YLCASGSFDF 229
Query: 265 YGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEIL 324
Y LE V + + A +AD TVS+ ++E +L
Sbjct: 230 YNCLESVDVDHEAGRFGIYHR-YCIERAAAHSADVFTTVSQITAFEAE---------HLL 279
Query: 325 SSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384
+ + + NG+++ ++ + + ++ V+ + L +
Sbjct: 280 KRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDL---DNTLY 334
Query: 385 IGFIGRLDY-QKGIDLI---------RLAAPEILADDIQFVMLGSGDPQFESWMRDTEAT 434
GR +Y KG D+ RL + F+++ + + F +A
Sbjct: 335 FFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAE 394
Query: 435 YKDKYRGWVGFNVPISHRIT 454
+ I RI
Sbjct: 395 VRALENTVHEVTTSIGKRIF 414
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 6e-09
Identities = 17/140 (12%), Positives = 38/140 (27%), Gaps = 9/140 (6%)
Query: 435 YKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDT 494
+ + GC + + PS +EP G G + G
Sbjct: 497 HPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSY 556
Query: 495 VENFNPFAREGSGEGTGWSFLP---LSEESMLTALRFAIRTYREHKSSWEGLMRRGMEK- 550
+E+ + G + + + + L + + + R E
Sbjct: 557 MEDLIETNQAKDY---GIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEAL 613
Query: 551 --DYTWENAAIQYEQVFEWA 568
W+ ++Y + + A
Sbjct: 614 SDLLDWKRMGLEYVKARQLA 633
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 9e-08
Identities = 20/198 (10%), Positives = 45/198 (22%), Gaps = 30/198 (15%)
Query: 377 PIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEIL-----ADDIQFVMLGSGDPQFESWMRD 430
R +I GR + LI A + +++ + + +G
Sbjct: 236 DKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHK-------- 287
Query: 431 TEATYKDKYRGWVGFNVPIS--HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 488
+ + + + I + L +G V+
Sbjct: 288 -DIALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL-RVITNK 345
Query: 489 GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM 548
+D S L+ E++ L + + M
Sbjct: 346 YENKDLSNW----------HSNIVSLEQLNPENIAETLVELCM--SFNNRDVDKKESSNM 393
Query: 549 EKDYTWENAAIQYEQVFE 566
N +++ E
Sbjct: 394 MFYINEFNEFSFIKEIEE 411
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 576 | |||
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 100.0 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 100.0 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 100.0 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.97 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.96 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.95 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.95 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.93 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.92 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.92 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.92 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.9 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.86 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.85 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.83 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.73 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.71 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.69 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.68 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.63 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.59 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.58 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.52 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.49 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.46 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.44 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.38 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.37 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.15 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 98.96 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 98.92 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 98.79 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.68 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.64 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 98.45 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.03 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.64 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 95.81 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 95.24 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 94.54 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 94.3 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 93.77 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 93.13 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 92.2 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 91.42 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 91.29 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 90.42 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 86.29 |
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-64 Score=542.60 Aligned_cols=485 Identities=41% Similarity=0.685 Sum_probs=390.8
Q ss_pred ccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEE
Q 008154 61 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI 140 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (576)
.....|||+|+|+|+.|++++||++.+++.|+++|+++||+|.||+|.|++-. +..+......+.+.++...+
T Consensus 5 ~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~-------~~~~~~~~~~~~~~~~~~~~ 77 (536)
T 3vue_A 5 HHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYK-------DAWDTSVVAEIKVADRYERV 77 (536)
T ss_dssp ---CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCT-------TCEEEEEEEEEEETTEEEEE
T ss_pred cCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhh-------hhcccceEEEEEecCceEEE
Confidence 34567999999999999989999999999999999999999999999997632 22333445667777888888
Q ss_pred EEEEeeecCeEEEEecCCCCCCC------CCCCCCCC-CCCCchHHHHHHHHHHHHhhcccCCCCC-----CCCCCccEE
Q 008154 141 AFFHEYREGVDWVFVDHPSYHRP------GNPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLGG-----FTYGEKCIF 208 (576)
Q Consensus 141 ~~~~~~~~gv~v~~l~~~~~~~~------~~~y~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~pDVv 208 (576)
++++...+|+++|+++++.+..+ ..+|++.. .+|.|+..||.+|+.++.++...++... .....|||+
T Consensus 78 ~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIi 157 (536)
T 3vue_A 78 RFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVF 157 (536)
T ss_dssp EEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEE
T ss_pred EEEEEEECCceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEE
Confidence 99999999999999998876543 45777544 3788999999999999998876654321 112367899
Q ss_pred EeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccch
Q 008154 209 LVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVN 288 (576)
Q Consensus 209 H~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (576)
|+|+||+++++.+++......+...++|+|+|+|++.+++.++...+...+.+......... +.......+...+|
T Consensus 158 H~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~n 233 (536)
T 3vue_A 158 VCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDF----IDGYDTPVEGRKIN 233 (536)
T ss_dssp EEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEE----EETTTSTTCEEEEE
T ss_pred EECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhh----hhcccccccccchh
Confidence 99999999999999887765555568999999999999999988887777766544322110 00111222355689
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCC-cccchHhH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD-LSGKVQCK 367 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~-~~~~~~~~ 367 (576)
+++.++..||.|++||+.+++++.+. ++.++.........++.+|+||||.+.|.|.....+..+|.... ...+..++
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k 312 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNK 312 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHH
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHH
Confidence 99999999999999999999998653 22222222233466899999999999999988777777776653 45678889
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
..+++.+|++.+++.++|+|+||+.++||++.|++|+++|.+++.+++++|.|++......+........++.+...++.
T Consensus 313 ~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~ 392 (536)
T 3vue_A 313 EALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA 392 (536)
T ss_dssp HHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCH
T ss_pred HHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccH
Confidence 99999999998889999999999999999999999999998889999999999877777777777778888888888888
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCccee----------EeCCC
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW----------SFLPL 517 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~----------~~~~~ 517 (576)
++...+|++||++|+||++|+||++++|||+||+|||+|+.||.+|.+.+ ++||+ ++++.
T Consensus 393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~d----------g~~G~~~~~~~~~g~l~~~~ 462 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIE----------GKTGFHMGRLSVDCKVVEPS 462 (536)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCB----------TTTEEECCCCCSCTTCCCHH
T ss_pred HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeC----------CCCccccccCCCceeEECCC
Confidence 88889999999999999999999999999999999999999999999998 88887 56777
Q ss_pred CHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Q 008154 518 SEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 518 d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
|+++++++|.+++..+ +.+.|.+++++++++.|||++++++|.++|+++.
T Consensus 463 d~~~la~ai~ral~~~--~~~~~~~~~~~am~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 463 DVKKVAATLKRAIKVV--GTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHHHHHHHHHHHT--TSHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 8999999999998754 4456899999999999999999999999999863
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-48 Score=415.08 Aligned_cols=469 Identities=35% Similarity=0.578 Sum_probs=336.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++.+++|....||+++++.+++++|+++||+|+|+++.++... ..+.. ..........-+ ....+.+.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~---~~~~~---~~~~~~~~~~~~-~~~~~~~~ 73 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVK---AAVTD---PVKCFEFTDLLG-EKADLLEV 73 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHH---HHCCS---CEEEEEESCSSS-CCEEEEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccccccc---ccccc---cceeEEEEEecC-CeEEEEEE
Confidence 899999999888434799999999999999999999999998653210 00000 000000000000 01223334
Q ss_pred eecCeEEEEecCCCC-CCCCCCCCCC-CCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 146 YREGVDWVFVDHPSY-HRPGNPYGDI-NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~-~~~~~~y~~~-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
..+|+++++++.+.+ .+...+|+.. ..+|.++..++..+...+.+.++.+- ...+|||||+|++.+++.+.+++
T Consensus 74 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~DiIh~~~~~~~~~~~~~~ 149 (485)
T 1rzu_A 74 QHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVL----PGWRPDMVHAHDWQAAMTPVYMR 149 (485)
T ss_dssp EETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCS----SSCCCSEEEEEHHHHTTHHHHHH
T ss_pred EecCceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhc----cCCCCCEEEecccchhHHHHHHh
Confidence 458999999875432 1111234321 12344566677666666655554320 11279999999988777777666
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
.... .++|+|+|+|+..+.+.++...+..++++...+......+ .....+++.+++.||.++++
T Consensus 150 ~~~~-----~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ad~vi~~ 213 (485)
T 1rzu_A 150 YAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEY-----------YNDVSFLKGGLQTATALSTV 213 (485)
T ss_dssp HSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEE-----------TTEEEHHHHHHHHCSEEEES
T ss_pred hccc-----CCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccc-----------cccccHHHHHHhhcCEEEec
Confidence 5311 4789999999986655554444444444433322110000 11235778899999999999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|+.+++.+.+..++.++...+.....++.+||||+|.+.|.+.....+...|...+..++..++..+++.+|++.+ +.+
T Consensus 214 S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~ 292 (485)
T 1rzu_A 214 SPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDD-GSP 292 (485)
T ss_dssp CHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCS-SSC
T ss_pred CHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCC-CCe
Confidence 9998887743111111222233456789999999999988877654444556656666777778889999999832 256
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+|+|+||+.+.||++.+++|++.+.+++++|+|+|+|++.+.+.++.+.+....++..+.+++.+.+..+|+.||++|+|
T Consensus 293 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~p 372 (485)
T 1rzu_A 293 LFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIP 372 (485)
T ss_dssp EEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEEC
T ss_pred EEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEEEEC
Confidence 99999999999999999999999977799999999997545555555555555677767888777777899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCC---------cceeEeCCCCHHHHHHHHHHHHHHhh
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGE---------GTGWSFLPLSEESMLTALRFAIRTYR 534 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~---------~~G~~~~~~d~~~la~~i~~~l~~~~ 534 (576)
|.+|+||++++|||+||+|||+|+.||..|++.+ + .+|++++++|+++++++|.+++..+
T Consensus 373 S~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~----------~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~- 441 (485)
T 1rzu_A 373 SRFEPCGLTQLYALRYGCIPVVARTGGLADTVID----------ANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYY- 441 (485)
T ss_dssp CSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCB----------CCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHH-
T ss_pred cccCCCCHHHHHHHHCCCCEEEeCCCChhheecc----------cccccccccCCcceEeCCCCHHHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999988 7 8999999999999999999998422
Q ss_pred hCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 535 EHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 535 ~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
+|++.+.++++++.+++|||++++++|.++|++++++.+
T Consensus 442 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~~~~ 480 (485)
T 1rzu_A 442 HDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLISKGH 480 (485)
T ss_dssp TCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC---
T ss_pred CCHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhCCCC
Confidence 488999999999888899999999999999999987654
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-48 Score=413.66 Aligned_cols=467 Identities=34% Similarity=0.584 Sum_probs=331.1
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++.+++|....||+++++.+++++|+++||+|+|+++.++... ..+. +..........+. ...+...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~---~~~~---~~~~~~~~~~~~~--~~~~~~~ 72 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIR---RGVT---DAQVVSRRDTFAG--HITLLFG 72 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHH---HHCT---TCEEEEEECCTTC--CEEEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccc---cccc---cceeEEEecccCC--cEEEEEE
Confidence 899999999888535799999999999999999999999998642210 0000 0000000000000 1122233
Q ss_pred eecCeEEEEecCCCCCCCCC-CCCCCC-CCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 146 YREGVDWVFVDHPSYHRPGN-PYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~-~y~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
..+|+++++++.+.+..+.. +|+... .+|.++..++..+...+.+.++.+.. ..+|||||+|++.+++++.+++
T Consensus 73 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Divh~~~~~~~~~~~~~~ 148 (485)
T 2qzs_A 73 HYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDP----FWRPDVVHAHDWHAGLAPAYLA 148 (485)
T ss_dssp EETTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSST----TCCCSEEEEETGGGTTHHHHHH
T ss_pred EECCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhcc----CCCCCEEEeeccchhHHHHHHh
Confidence 35789999987543211111 343211 12345556666666666665543210 1279999999988877776665
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
.+. .++|+|+|.|+..+.+.++...+..++++...+...... ......+++.+++.||.++++
T Consensus 149 ~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ad~vi~~ 211 (485)
T 2qzs_A 149 ARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLE-----------FNGQISFLKAGLYYADHITAV 211 (485)
T ss_dssp HTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTE-----------ETTEEEHHHHHHHHCSEEEES
T ss_pred hcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhccccccc-----------ccccccHHHHHHHhcCeEEec
Confidence 322 579999999998655444333333334333322110000 011235778889999999999
Q ss_pred CccchhhhccccCCcchhhhhhccC--CceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRK--SVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 381 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~--~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (576)
|+.+++.+....++.++...+.... .++.+||||+|.+.|.+.....+..+|...+..++..++..+++.+|++.+++
T Consensus 212 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 291 (485)
T 2qzs_A 212 SPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDK 291 (485)
T ss_dssp SHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTT
T ss_pred CHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCC
Confidence 9998877642101110111111123 68999999999998887665545555666666677777888999999985447
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
.++|+|+||+.+.||++.+++|++.+.+++++|+|+|+|++...+.++.+.+....++..+.+++.+.+..+|+.||++|
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v 371 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVIL 371 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCEEE
Confidence 79999999999999999999999999777999999999975445555555555556776678887777678999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCC---------cceeEeCCCCHHHHHHHHHHHHHH
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGE---------GTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~---------~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
+||.+|+||++++||||||+|||+|+.||..|++.+ + .+|++++++|+++++++|.+++..
T Consensus 372 ~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~----------~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~ 441 (485)
T 2qzs_A 372 VPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD----------CSLENLADGVASGFVFEDSNAWSLLRAIRRAFVL 441 (485)
T ss_dssp ECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCB----------CCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHH
T ss_pred ECCccCCCcHHHHHHHHCCCCEEECCCCCccceecc----------CccccccccccceEEECCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988 6 899999999999999999999843
Q ss_pred hhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 533 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
+ +|++.+.++++++.+++|||++++++|.++|++++.+.
T Consensus 442 ~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 442 W-SRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp H-TSHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC---
T ss_pred c-CCHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhhhhh
Confidence 2 48889999999988889999999999999999987644
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-45 Score=385.00 Aligned_cols=424 Identities=24% Similarity=0.359 Sum_probs=320.2
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
++|||++++.+++| ...||+++++.+++++|+++||+|+++++.++..... . ...+.+ .+.....+++
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~--~-------~~~~~~--~~~~~~~~~~ 68 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGE--E-------IGKIRV--FGEEVQVKVS 68 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCE--E-------EEEEEE--TTEEEEEEEE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhh--h-------hccccc--cCcccceeee
Confidence 46999999999888 5689999999999999999999999999887553211 0 111122 3344555666
Q ss_pred EeeecCeEEEEecCCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 144 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDN-QFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 144 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
....+|+++++++. .+..+..+|+. +.++ ..++..+.....+.++.+-.. ..+|||||+|++..++.+.++
T Consensus 69 ~~~~~gv~v~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~ 140 (439)
T 3fro_A 69 YEERGNLRIYRIGG-GLLDSEDVYGP----GWDGLIRKAVTFGRASVLLLNDLLRE---EPLPDVVHFHDWHTVFAGALI 140 (439)
T ss_dssp EEEETTEEEEEEES-GGGGCSSTTCS----HHHHHHHHHHHHHHHHHHHHHHHTTT---SCCCSEEEEESGGGHHHHHHH
T ss_pred eccCCCceEEEecc-hhccccccccC----CcchhhhhhHHHHHHHHHHHHHHhcc---CCCCeEEEecchhhhhhHHHH
Confidence 66789999999987 33333345542 2244 556666666666655443100 127999999999888777777
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
++. .++|+|+|+|+...... +........+.. ........+++.+++.||.+++
T Consensus 141 ~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~ad~ii~ 194 (439)
T 3fro_A 141 KKY-------FKIPAVFTIHRLNKSKL-PAFYFHEAGLSE------------------LAPYPDIDPEHTGGYIADIVTT 194 (439)
T ss_dssp HHH-------HCCCEEEEESCCCCCCE-EHHHHHHTTCGG------------------GCCSSEECHHHHHHHHCSEEEE
T ss_pred hhc-------cCCCEEEEecccccccC-chHHhCcccccc------------------ccccceeeHhhhhhhhccEEEe
Confidence 643 47999999998743221 111111000000 0012223688899999999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+.+.+.. .+.+.....++.+||||+|.+.|.+.... ..+...+..+++.++++ ++
T Consensus 195 ~S~~~~~~~---------~~~~~~~~~~i~vi~ngvd~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~- 251 (439)
T 3fro_A 195 VSRGYLIDE---------WGFFRNFEGKITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMD--EG- 251 (439)
T ss_dssp SCHHHHHHT---------HHHHGGGTTSEEECCCCCCTTTSCGGGSC-----------SCHHHHHHHHHHHHTCC--SC-
T ss_pred cCHHHHHHH---------hhhhhhcCCceeecCCCCCchhcCccccc-----------chhhhhHHHHHHHcCCC--CC-
Confidence 999887653 33445678899999999999888765211 12344577889999987 45
Q ss_pred CEEEEecccc-cccCHHHHHHHHHhhhc----CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEcc-CChhHHHHHHhc
Q 008154 383 PLIGFIGRLD-YQKGIDLIRLAAPEILA----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-FNVPISHRITAG 456 (576)
Q Consensus 383 ~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~----~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~ 456 (576)
++|+|+||+. +.||++.+++|++.+.+ ++++|+|+|+|++.+.+..+.+.+... +.+.+.+ .+.+.+..+++.
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~ 330 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGS 330 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTT
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHHHHH
Confidence 9999999999 99999999999999987 689999999998655566777766666 6666777 577777899999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhC
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 536 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~ 536 (576)
||++|+||.+|++|++++||||||+|||+|+.|+..|++.+ + +|++++++|+++++++|.+++.. +
T Consensus 331 adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~----------~-~g~~~~~~d~~~la~~i~~ll~~---~ 396 (439)
T 3fro_A 331 VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN----------E-TGILVKAGDPGELANAILKALEL---S 396 (439)
T ss_dssp CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCT----------T-TCEEECTTCHHHHHHHHHHHHHH---T
T ss_pred CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEc----------C-ceEEeCCCCHHHHHHHHHHHHhc---C
Confidence 99999999999999999999999999999999999999987 5 99999999999999999999862 5
Q ss_pred HHHHHHHHHHHH--hhhCCHHHHHHHHHHHHHHhhhC
Q 008154 537 KSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 537 ~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
++.+.++++++. .++|||+.++++|.++|++++++
T Consensus 397 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 667777777773 37899999999999999998764
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=383.46 Aligned_cols=449 Identities=13% Similarity=0.135 Sum_probs=307.7
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEecCCCCCCcccchhcccc--Cc----------eeEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTAADENFTLAKD--LG----------CCMKICC 133 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~--~~----------~~~~~~~ 133 (576)
-++.+|||.++ ++||+.+++..-|+.+.+ .|.+..+|||..++.. . ..++.... .. .+++ ..
T Consensus 29 ~lfE~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~-~-~e~e~~~~~~~~~~~~~~~~~~~~~~-~~ 103 (725)
T 3nb0_A 29 LLFETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATY-Q-NEVDILDWKKPEAFSDEMRPVQHALQ-TM 103 (725)
T ss_dssp EEEEEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTH-H-HHEEECCSSSGGGSCSTTHHHHHHHH-HH
T ss_pred eEEeeehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcC-C-cceeecCCCCchhhcchhHHHHHHHH-HH
Confidence 49999999998 699999999999999999 7999999999643322 1 11111110 00 0110 12
Q ss_pred cCCeeEEEEEEeeecC-eEEEEecCCCC-CCCCCCCCCCC-----------CCCCchHHHHHHHHHHHHhhcccCCCCCC
Q 008154 134 FGGEQEIAFFHEYREG-VDWVFVDHPSY-HRPGNPYGDIN-----------GAFGDNQFRYTLLCYAACEAPLVLPLGGF 200 (576)
Q Consensus 134 ~~~~~~~~~~~~~~~g-v~v~~l~~~~~-~~~~~~y~~~~-----------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 200 (576)
..+++.+++++|.|+| +.++++|..++ ....++++..| ++| ++..+|.+++.++++.+..+. .+
T Consensus 104 ~~~G~~v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~i~s~~~yg~~-dd~~~F~y~~~avl~~l~~~~--~~ 180 (725)
T 3nb0_A 104 ESRGVHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFET-NDAILLGYTVAWFLGEVAHLD--SQ 180 (725)
T ss_dssp HTTTCCEEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHCCCCCSSCHHH-HHHHHHHHHHHHHHHHHHHHC--CS
T ss_pred HHCCCeEEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhCcCCCCcccch-hHHHHHHHHHHHHHHHHHhcC--CC
Confidence 4567888999999998 77888884432 22222332222 234 678899999999998876542 23
Q ss_pred CCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCC------CCCCCChhh-hhhcCCChhhhcccccccc
Q 008154 201 TYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLS------HQGVEPAAT-YKNLGLPSEWYGALEWVFP 273 (576)
Q Consensus 201 ~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 273 (576)
+|||+|+|||++++++.+++.+. +++++|||+|++. +++.++... +..++.+.....
T Consensus 181 ---~pdIiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~------- 244 (725)
T 3nb0_A 181 ---HAIVAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGR------- 244 (725)
T ss_dssp ---EEEEEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHH-------
T ss_pred ---CCcEEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhh-------
Confidence 69999999999999999998765 6899999999983 134332111 122222111100
Q ss_pred cccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccc
Q 008154 274 TWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS 353 (576)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~ 353 (576)
.......++++.++..||+|++||+.+++++.+ ++..+...+ ||||||++.|.|...
T Consensus 245 -------~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~---------Ll~r~~d~i--IpNGID~~~f~p~~~----- 301 (725)
T 3nb0_A 245 -------FGIYHRYCIERAAAHSADVFTTVSQITAFEAEH---------LLKRKPDGI--LPNGLNVIKFQAFHE----- 301 (725)
T ss_dssp -------TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHH---------HTSSCCSEE--CCCCBCCCCCSSTTH-----
T ss_pred -------hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHH---------HhcCCCCEE--EcCCccccccCcchh-----
Confidence 001234689999999999999999999999852 445555544 999999999987521
Q ss_pred cCCcCCcccchHhHHHHHHHc------CCCCC-CCCCEEEEecccc-cccCHHHHHHHHHhhhc----C-----CcEEEE
Q 008154 354 HYSIDDLSGKVQCKIALQKEL------GLPIR-PDCPLIGFIGRLD-YQKGIDLIRLAAPEILA----D-----DIQFVM 416 (576)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~------~i~~~-~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~----~-----~~~lii 416 (576)
.+..+..++..+++.+ +++.+ ++.++++.+||++ .+||++++++|+.+|.. . -+.|+|
T Consensus 302 -----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii 376 (725)
T 3nb0_A 302 -----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIV 376 (725)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred -----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEE
Confidence 1122334444444432 33332 3456677789999 79999999999999863 1 267777
Q ss_pred EeCCChhh-------------------------------------------------HH---------------------
Q 008154 417 LGSGDPQF-------------------------------------------------ES--------------------- 426 (576)
Q Consensus 417 ~G~g~~~~-------------------------------------------------~~--------------------- 426 (576)
+..+.... ++
T Consensus 377 ~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~ 456 (725)
T 3nb0_A 377 MPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPE 456 (725)
T ss_dssp CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCT
T ss_pred eCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCC
Confidence 76552110 00
Q ss_pred ------------------HHHHHHHH-------hcCceEEEccCChh-------HHHHHHhcCCEEEeCCCCCCCcHHHH
Q 008154 427 ------------------WMRDTEAT-------YKDKYRGWVGFNVP-------ISHRITAGCDILLMPSRFEPCGLNQL 474 (576)
Q Consensus 427 ------------------~~~~~~~~-------~~~~~~~~~~~~~~-------~~~~ll~~~Dv~v~ps~~E~~g~s~l 474 (576)
....+++. .++++++..+|-.. ....++++||++|+||++|+||++++
T Consensus 457 ~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~L 536 (725)
T 3nb0_A 457 GQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPA 536 (725)
T ss_dssp TCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHH
T ss_pred CCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHH
Confidence 00000100 01235555555222 25679999999999999999999999
Q ss_pred HHHHcCCceEEeCccccccccccccccccCCCCCcceeEeC---CCCHHHHHHHHHHHHHHhhh-CHHHHHHHHHHH--H
Q 008154 475 YAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL---PLSEESMLTALRFAIRTYRE-HKSSWEGLMRRG--M 548 (576)
Q Consensus 475 EAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~---~~d~~~la~~i~~~l~~~~~-~~~~~~~~~~~a--~ 548 (576)
||||||+|||+|+.||+.|++.+..... +.+.+|+++. +.|+++++++|.+++..+.+ ++..+.++++++ +
T Consensus 537 EAmA~G~PvI~s~~gG~~d~V~dg~~~~---~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~ 613 (725)
T 3nb0_A 537 ECTVMGVPSITTNVSGFGSYMEDLIETN---QAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEAL 613 (725)
T ss_dssp HHHHTTCCEEEETTBHHHHHHHTTSCHH---HHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHG
T ss_pred HHHHcCCCEEEeCCCChhhhhhcccccc---CCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999999999999998711000 0014799884 45789999999999886654 677777887776 5
Q ss_pred hhhCCHHHHHHHHHHHHHHhhh
Q 008154 549 EKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 549 ~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+++|+|++++++|+++|+.++.
T Consensus 614 A~~FSWe~iA~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 614 SDLLDWKRMGLEYVKARQLALR 635 (725)
T ss_dssp GGGGBHHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHh
Confidence 6799999999999999999874
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=375.83 Aligned_cols=470 Identities=14% Similarity=0.047 Sum_probs=325.2
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecCC----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFGG---- 136 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~---- 136 (576)
.++||+|+++.++.++++++|.+.+.+|..|..|.+.+.. .+.++. ...+.|.+.|+
T Consensus 111 LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i-~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a 189 (796)
T 2c4m_A 111 LGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSF-NEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRA 189 (796)
T ss_dssp CCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEE-ETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEE
T ss_pred cCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEe-eCCEEEeeCCccccCCCceeEecCCcEEEEEeCCEEEEE
Confidence 4899999999999999999999999999999999765443 222211 11233333332
Q ss_pred --------------eeEEEEEEeeecCeEEEEec---CCC---------CCC--CCCCCCCCCCCCCchHHHH---HHHH
Q 008154 137 --------------EQEIAFFHEYREGVDWVFVD---HPS---------YHR--PGNPYGDINGAFGDNQFRY---TLLC 185 (576)
Q Consensus 137 --------------~~~~~~~~~~~~gv~v~~l~---~~~---------~~~--~~~~y~~~~~~~~~~~~r~---~~~~ 185 (576)
...+|+|...++. .+.++ ... ..+ +..+|++-. .+...+.|+ .+|+
T Consensus 190 ~~yd~pi~gy~~~~~n~lrlW~a~~~~--~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~-~~~Gk~lRL~Qe~ff~ 266 (796)
T 2c4m_A 190 IPYDMPITGYGTHNVGTLRLWKAEPWE--EFDYDAFNAQRFTDAIIERERVSDICRVLYPNDT-TYEGKKLRVRQQYFFT 266 (796)
T ss_dssp EEEEEEECCTTCCCCEEEEEEEEEESS--SSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCS-SHHHHHHHHHHHHHHH
T ss_pred EEEeccccCcCCCceEEEEEEeccccc--ccchhhccCcchhhhhhchHhhhchhhcCcCCCC-CcchHHHHHHhHHHHH
Confidence 3344455544333 11111 000 011 345888610 000147777 6777
Q ss_pred HHHHhh-cccC-----CCCCCCCCCccEEEeCCCccchHHH-HHHhhc----cCCCCC---CCCcEEEEeecCCCCCC--
Q 008154 186 YAACEA-PLVL-----PLGGFTYGEKCIFLVNDWHAGLVPV-LLASKY----RPHGVY---KDARSILVIHNLSHQGV-- 249 (576)
Q Consensus 186 ~~~~~~-~~~~-----~~~~~~~~~pDVvH~~~~~~~~~~~-~l~~~~----~~~~~~---~~~~~v~t~H~~~~~~~-- 249 (576)
.++++. ++++ .+..+. +|||||+||||+++++. +++... .....+ .+..++||+||+.+++.
T Consensus 267 ~a~lq~ilr~~~~~~~~l~~l~--~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~ 344 (796)
T 2c4m_A 267 SASLQAMIQDHLAHHKDLSNFA--EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQ 344 (796)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHH--HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCE
T ss_pred HHHHHHHHHHHHHhCCChhhcC--CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhh
Confidence 777774 4422 111121 69999999999999877 554321 011001 13578999999999986
Q ss_pred CChhhhhhcC---------CChhhhcccccc---cccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCC
Q 008154 250 EPAATYKNLG---------LPSEWYGALEWV---FPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGG 317 (576)
Q Consensus 250 ~~~~~~~~~~---------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~ 317 (576)
||.++++.+- ++..++...... ...+.+. .....+.++|.++|+..|+.|++||+.+.+.++++.++
T Consensus 345 wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~-~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~ 423 (796)
T 2c4m_A 345 WDEQIFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRM-APIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETLA 423 (796)
T ss_dssp EEHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH-CSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH
T ss_pred CCHHHHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcc-cceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhhh
Confidence 8888774321 111111100000 0000010 01124479999999999999999999999999866654
Q ss_pred cchhhhhhccCCceeEecCCCCCCCCCC----CCCccccccCC-----------------cCC-------cccchHhHHH
Q 008154 318 YGLHEILSSRKSVLNGITNGIDITEWNP----SSDEHIASHYS-----------------IDD-------LSGKVQCKIA 369 (576)
Q Consensus 318 ~~l~~~~~~~~~~i~vi~nGvd~~~~~~----~~~~~l~~~~~-----------------~~~-------~~~~~~~~~~ 369 (576)
+.+...+.++..|+||||...|.. .-..-+...+. .++ |..+..++..
T Consensus 424 ----~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~ 499 (796)
T 2c4m_A 424 ----DWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQD 499 (796)
T ss_dssp ----HHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHH
T ss_pred ----hHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHH
Confidence 344556778999999999999943 21111111222 233 4556666766
Q ss_pred ----HHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc---------CCcEEEEEeCCChhhHHHH------H
Q 008154 370 ----LQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQFESWM------R 429 (576)
Q Consensus 370 ----~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~---------~~~~lii~G~g~~~~~~~~------~ 429 (576)
+++..|++.+++.+++++++|+..+||+++ ++.++.++.+ .|+++||+|+++|.++..+ .
T Consensus 500 L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~ 579 (796)
T 2c4m_A 500 FAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLIN 579 (796)
T ss_dssp HHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHH
Confidence 588999998899999999999999999999 8999888753 4799999999998887773 3
Q ss_pred HHHH------HhcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeCcccccccccccc
Q 008154 430 DTEA------TYKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFN 499 (576)
Q Consensus 430 ~~~~------~~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~ 499 (576)
.+++ ..++ +++++++|+..+++.++++||++++||+ +|+||++.|.||.+|.++|++.+|++.|+....
T Consensus 580 ~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~v- 658 (796)
T 2c4m_A 580 SIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSV- 658 (796)
T ss_dssp HHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHH-
T ss_pred HHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhc-
Confidence 3444 4556 8999999999999999999999999999 999999999999999999999999999986441
Q ss_pred ccccCCCCCcceeEeCC--CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 500 PFAREGSGEGTGWSFLP--LSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 500 ~~~~~~~~~~~G~~~~~--~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+.+|||+|.. .++.++... ......+..++ .++++..+.+...|||+.- .+|.++|+.++.
T Consensus 659 -------G~~NgF~FG~~~~ev~~l~~~-y~a~~~y~~~~-~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 659 -------GEENAYIFGARVEELPALRES-YKPYELYETVP-GLKRALDALDNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp -------CGGGSEEESCCTTTHHHHHHT-CCHHHHHHHST-THHHHHHTTTSSSSCCTTC-CHHHHHHHHHHS
T ss_pred -------CCCcEEEecCchhhHHHHHHh-hChHHHhhcCH-HHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHh
Confidence 1479999987 677776665 55555444566 6777777778889999877 789999999875
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=364.53 Aligned_cols=467 Identities=16% Similarity=0.135 Sum_probs=323.8
Q ss_pred ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEee--------
Q 008154 80 KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICC-------- 133 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~-------- 133 (576)
++||+|+++.++.++++++|.+.+.+|..|..|.+.+.. .+.++. ...+.|.+
T Consensus 111 gnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i-~dG~Q~E~~d~wl~~~~pwe~~r~~~~~~V~f~g~~~~~~ 189 (796)
T 1l5w_A 111 GNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSF-VDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTKDG 189 (796)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEE-ETTEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECTTS
T ss_pred CCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEe-cCCeeEEecCccccCCCcceeecCCcEEEEeeCCEEeecc
Confidence 799999999999999999999999999999999765443 222111 11122222
Q ss_pred -----------------cC----CeeEEEEEEeeecCeEEEEec---CCCC---------CC--CCCCCCCCCCCCCchH
Q 008154 134 -----------------FG----GEQEIAFFHEYREGVDWVFVD---HPSY---------HR--PGNPYGDINGAFGDNQ 178 (576)
Q Consensus 134 -----------------~~----~~~~~~~~~~~~~gv~v~~l~---~~~~---------~~--~~~~y~~~~~~~~~~~ 178 (576)
+| ....+|+|...++. .+.++ ...+ .+ +..+|++-. .+..++
T Consensus 190 ~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~--~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~-~~~Gk~ 266 (796)
T 1l5w_A 190 RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAH--PFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDN-AFEGKK 266 (796)
T ss_dssp CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSS--CCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCCCS-SHHHHH
T ss_pred eecCCceEEEEEecccccCCCCCceEEEEEEEeccCc--ccChhhcCCccHhhhhhchHhHhhhhhcCcCCCC-ccchHH
Confidence 23 33445555555544 12222 1111 11 456888610 011156
Q ss_pred HHH---HHHHHHHHhh-cccCC-----CCCCCCCCccEEEeCCCccchHHH-HHHhhc----cCCCCC---CCCcEEEEe
Q 008154 179 FRY---TLLCYAACEA-PLVLP-----LGGFTYGEKCIFLVNDWHAGLVPV-LLASKY----RPHGVY---KDARSILVI 241 (576)
Q Consensus 179 ~r~---~~~~~~~~~~-~~~~~-----~~~~~~~~pDVvH~~~~~~~~~~~-~l~~~~----~~~~~~---~~~~~v~t~ 241 (576)
.|+ .+|+.++++. +++++ +..+. +|||||+||||+++++. +++... .....+ .+..++||+
T Consensus 267 lRL~Qe~ff~~a~lq~ilr~~~~~~~~~~~l~--~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~ 344 (796)
T 1l5w_A 267 LRLMQQYFQCACSVADILRRHHLAGRKLHELA--DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTN 344 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGHH--HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhcC--CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEe
Confidence 777 6777777775 43221 11111 69999999999999877 554321 011011 257899999
Q ss_pred ecCCCCCC--CChhhhhhcCCChhhhc-----------cccccc----ccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 242 HNLSHQGV--EPAATYKNLGLPSEWYG-----------ALEWVF----PTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 242 H~~~~~~~--~~~~~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
||+.+++. ||.++++.+- + +++. .....+ ..+.+. .....+.++|.+.|+..|+.|++||
T Consensus 345 HTl~~egle~wp~~l~~~~l-p-r~~~ii~~I~~~f~~~~~~~~~~~~~~~~~~-~i~~~~~vnMa~lai~~S~~VNgVS 421 (796)
T 1l5w_A 345 HTLMPEALERWDVKLVKGLL-P-RHMQIINEINTRFKTLVEKTWPGDEKVWAKL-AVVHDKQVHMANLCVVGGFAVNGVA 421 (796)
T ss_dssp CCCSGGGSCEEEHHHHHHHC-H-HHHHHHHHHHHHHHHHHHHHSTTCHHHHHHH-CSEETTEEEHHHHHHHHSSEEEESS
T ss_pred cCCcHhhhhcCCHHHHHHHh-H-HHHHHHhccCHHHHHHHHHhcCCcHHHHhhh-hcccCCcccHHHHHHHhcCcccccc
Confidence 99999885 7777774321 1 1111 000000 001111 1112447999999999999999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCC---CCccccccCCc-----------------CC-----
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPS---SDEHIASHYSI-----------------DD----- 359 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~---~~~~l~~~~~~-----------------~~----- 359 (576)
+.+.+.++++.++ +.+...+.++..|+||||...|... ..+.+.+...+ ++
T Consensus 422 ~lH~e~ik~~~f~----~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~ 497 (796)
T 1l5w_A 422 ALHSDLVVKDLFP----EYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQ 497 (796)
T ss_dssp HHHHHHHHHTTSH----HHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHH
T ss_pred HHHHHHHHhHHhh----HHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHH
Confidence 9999999876653 3445566789999999999888421 21222222222 22
Q ss_pred --cccchHhHHH----HHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc---------CCcEEEEEeCCChh
Q 008154 360 --LSGKVQCKIA----LQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQ 423 (576)
Q Consensus 360 --~~~~~~~~~~----~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~---------~~~~lii~G~g~~~ 423 (576)
|..+..++.. +++..|++.+++.+++++++|+..+||+++ ++.++.++.+ .|+++||+|+++|.
T Consensus 498 ~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~ 577 (796)
T 1l5w_A 498 QYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPG 577 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChh
Confidence 3556666666 588899998899999999999999999999 8999888765 58999999999988
Q ss_pred hHHHHH------HHHH------HhcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeC
Q 008154 424 FESWMR------DTEA------TYKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 424 ~~~~~~------~~~~------~~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~ 487 (576)
++..++ .+++ ..++ +++++++|+..+++.++++||++++||+ +|+||++.|.||.+|.++|++.
T Consensus 578 y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtL 657 (796)
T 1l5w_A 578 YYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTL 657 (796)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCc
Confidence 877733 3443 3455 8999999999999999999999999999 9999999999999999999999
Q ss_pred ccccccccccccccccCCCCCcceeEeCCCCHHHHHHH---HHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHH
Q 008154 488 TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA---LRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQV 564 (576)
Q Consensus 488 ~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~---i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~ 564 (576)
+|++.|+.... +.+|||+|.. +++++.+. ..+....+..++ .++++..+.+...|||+.- .+|.++
T Consensus 658 DGanvEi~e~v--------G~~NgF~FG~-~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~~g~fs~~~~-~~y~~L 726 (796)
T 1l5w_A 658 DGANVEIAEKV--------GEENIFIFGH-TVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELESGKYSDGDK-HAFDQM 726 (796)
T ss_dssp CTTHHHHHHHH--------CGGGSEECSC-CHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHHHTTTTTTCT-TTTHHH
T ss_pred CCeeeehhhcc--------CCCcEEEecC-CHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHHcCCCCCCcH-HHHHHH
Confidence 99999986441 1479999987 77766532 222333333466 6888888888899999885 889999
Q ss_pred HHHhhh
Q 008154 565 FEWASI 570 (576)
Q Consensus 565 y~~~~~ 570 (576)
|+.++.
T Consensus 727 y~~L~~ 732 (796)
T 1l5w_A 727 LHSIGK 732 (796)
T ss_dssp HHHTST
T ss_pred HHHHhc
Confidence 998875
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=360.83 Aligned_cols=470 Identities=15% Similarity=0.150 Sum_probs=307.7
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecC-----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFG----- 135 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~----- 135 (576)
.++||+|+++.++.++++++|.+.+.+|..|..|.+.+..- +.++. ...+.|.+.|
T Consensus 120 LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~-dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~ 198 (824)
T 2gj4_A 120 LGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC-GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHT 198 (824)
T ss_dssp ECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEE-TTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEEC
T ss_pred cCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEee-CCEEEEcCccccccCCcccccCCCceEEEEeCCEEEec
Confidence 57999999999999999999999999999999996554332 11111 1122332221
Q ss_pred -----------------------Ce----eEEEEEEeee-----------cCeEEEEecCC-CCCCCCCCCCCCCCCCCc
Q 008154 136 -----------------------GE----QEIAFFHEYR-----------EGVDWVFVDHP-SYHRPGNPYGDINGAFGD 176 (576)
Q Consensus 136 -----------------------~~----~~~~~~~~~~-----------~gv~v~~l~~~-~~~~~~~~y~~~~~~~~~ 176 (576)
.. ..+|+|.... ++...++.+.. ...=+..+|++- ..+..
T Consensus 199 ~~g~~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~~~~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D-~~~~G 277 (824)
T 2gj4_A 199 SQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPND-NFFEG 277 (824)
T ss_dssp SSSEEEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEECCC----------CHHHHHHTHHHHHGGGSBCCCCS-SCCCC
T ss_pred CCCceecccceEEEeeccCCcCCCCCCceEEEEEEEeecCcccchhhccCccHHHHHhcccchhhcCcCCCCCC-Cccch
Confidence 11 2445554431 11111111100 000134578761 11223
Q ss_pred hHHHH---HHHHHHHHhh-ccc-----CCCC-----CCCC-CCccEEEeCCCccchHHH-HHHhhccCCC----CC---C
Q 008154 177 NQFRY---TLLCYAACEA-PLV-----LPLG-----GFTY-GEKCIFLVNDWHAGLVPV-LLASKYRPHG----VY---K 233 (576)
Q Consensus 177 ~~~r~---~~~~~~~~~~-~~~-----~~~~-----~~~~-~~pDVvH~~~~~~~~~~~-~l~~~~~~~~----~~---~ 233 (576)
++.|+ .+++.+.++. +++ +++. .+.. .+|||||+||||+++++. +++...-..+ .+ .
T Consensus 278 k~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~ 357 (824)
T 2gj4_A 278 KELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVT 357 (824)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HhHhhhhhhhhhhhHHHHHHHHHHHhccccccccccchhhcCCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHh
Confidence 57887 4555554442 222 2210 1110 158899999999999887 5543210000 00 1
Q ss_pred CCcEEEEeecCCCCCC--CChhhhhh-cC--------CChhhhcccccccc----ccccccc--CCcCccchhHHHHHHh
Q 008154 234 DARSILVIHNLSHQGV--EPAATYKN-LG--------LPSEWYGALEWVFP----TWARTHA--LDTGEAVNVLKGAIVT 296 (576)
Q Consensus 234 ~~~~v~t~H~~~~~~~--~~~~~~~~-~~--------~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~a~~~ 296 (576)
+..++||+||+.+++. ||..++.. ++ +...++......++ .+.+... .++.+.++|.+.|+..
T Consensus 358 ~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~~i~~~~~~~vnMa~lai~~ 437 (824)
T 2gj4_A 358 VKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG 437 (824)
T ss_dssp HHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHT
T ss_pred cCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhhhhhcCCCcccHHHHHHHh
Confidence 2358999999999997 88887744 31 01111110000000 0100000 1134679999999999
Q ss_pred ccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCC---CCcccccc------------------C
Q 008154 297 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPS---SDEHIASH------------------Y 355 (576)
Q Consensus 297 ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~---~~~~l~~~------------------~ 355 (576)
|+.|++||+.+.+.++++.++. .+...+.++..|+||||...|... ..+.+.+. |
T Consensus 438 S~~VNgVS~lH~e~ik~~~f~~----~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y 513 (824)
T 2gj4_A 438 SHAVNGVARIHSEILKKTIFKD----FYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSY 513 (824)
T ss_dssp CSCEEESSHHHHHHHHHTTTHH----HHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGG
T ss_pred cCceeeEcHHHHHHHhhHHhHH----HHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhc
Confidence 9999999999999997766543 444557789999999999999421 12222221 2
Q ss_pred Cc-CC----c-ccchHhHHH----HHHHcCCCCCCCCCEEEEecccccccCHHHH-HHHHHhhh---c-C-----CcEEE
Q 008154 356 SI-DD----L-SGKVQCKIA----LQKELGLPIRPDCPLIGFIGRLDYQKGIDLI-RLAAPEIL---A-D-----DIQFV 415 (576)
Q Consensus 356 ~~-~~----~-~~~~~~~~~----~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~l-l~a~~~L~---~-~-----~~~li 415 (576)
.. ++ | ..+..++.. +++..|++.+++.++++++.||..+||++++ +.++.++. + + ++++|
T Consensus 514 ~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~I 593 (824)
T 2gj4_A 514 VDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVM 593 (824)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEE
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEE
Confidence 22 11 1 233444454 7788999988999999999999999999998 88888874 2 2 67999
Q ss_pred EEeCCChhhHHHHHH------HHHHh------cC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHc
Q 008154 416 MLGSGDPQFESWMRD------TEATY------KD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRY 479 (576)
Q Consensus 416 i~G~g~~~~~~~~~~------~~~~~------~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~ 479 (576)
|+|+++|.++..++. +++.. ++ +++++++|+..+++.++++||++++||+ +|+||++.|.||.+
T Consensus 594 f~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN 673 (824)
T 2gj4_A 594 IGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN 673 (824)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT
T ss_pred EEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence 999999888877443 33333 44 8999999999999999999999999999 99999999999999
Q ss_pred CCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHH--------------------------------
Q 008154 480 GTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR-------------------------------- 527 (576)
Q Consensus 480 G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~-------------------------------- 527 (576)
|.++|+|.+|++.|+..+. +.+|||+|... ++++ ..+.
T Consensus 674 GaLtigtlDGanvEi~e~v--------G~~Ngf~FG~~-~~ev-~~l~~~~~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~ 743 (824)
T 2gj4_A 674 GALTIGTMDGANVEMAEEA--------GEENFFIFGMR-VEDV-DRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQ 743 (824)
T ss_dssp TCEEEECSCTTHHHHHHHH--------CGGGSEECSCC-HHHH-HHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTS
T ss_pred CceEEEEecCccchhhhcc--------CCCCEEEeCCc-HHHH-HHHHHcCCCHHHHhcCCHHHHHHHHHHHhCCCCCCC
Confidence 9999999999998876421 15799999764 4444 2221
Q ss_pred ------------------------------HHHHHhhhCHHHHHHHHHHHHhh--hCCHHHHHHHHHHH
Q 008154 528 ------------------------------FAIRTYREHKSSWEGLMRRGMEK--DYTWENAAIQYEQV 564 (576)
Q Consensus 528 ------------------------------~~l~~~~~~~~~~~~~~~~a~~~--~fs~~~~~~~y~~~ 564 (576)
+.+...+.|++.|.+|+..+++. .||.++++++|.+-
T Consensus 744 ~~~y~~ly~~l~~~D~~~~~~Df~~y~~~q~~v~~~y~d~~~W~~~~~~nia~~g~FssdRtI~eY~~~ 812 (824)
T 2gj4_A 744 PDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYARE 812 (824)
T ss_dssp TTTTHHHHHHHHHCCTTCTGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCGGGBHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCChhhhhhhHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhCCcCcHHHHHHHHHH
Confidence 01222346899999999998643 79999999999864
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=357.91 Aligned_cols=423 Identities=17% Similarity=0.182 Sum_probs=277.5
Q ss_pred CceEEEEeeccC---------CccccCcHHHHHhh--------HHHHHHhCCCcEE----EEEecCCCCCCcccchhccc
Q 008154 65 SYNIVFVTAEAA---------PYSKTGGLGDVCGS--------LPVALAARGHRVM----VVSPRYFNGTAADENFTLAK 123 (576)
Q Consensus 65 ~mkI~~~s~e~~---------P~~~~GG~~~~~~~--------la~~l~~~G~~V~----vi~~~~~~~~~~~~~~~~~~ 123 (576)
.|+|+++|...+ |. .||..+|+.+ ++++|+++||+|+ ++|...+.... . .+.+..
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g-~-~y~~~~ 353 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVG-T-TCGERL 353 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTT-S-STTSSE
T ss_pred eeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCC-C-ccCCcc
Confidence 579999999876 74 8999999995 6666677999887 88876543211 1 111110
Q ss_pred cCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCC-------CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCC
Q 008154 124 DLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS-------YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLP 196 (576)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~-------~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 196 (576)
+. ....+|+++++++..+ |..+..+++. ...|. .......+...+
T Consensus 354 ------e~------------i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~--------L~~F~--~~~l~~il~~~~ 405 (816)
T 3s28_A 354 ------ER------------VYDSEYCDILRVPFRTEKGIVRKWISRFEVWPY--------LETYT--EDAAVELSKELN 405 (816)
T ss_dssp ------EE------------CTTCSSEEEEEECEEETTEEECSCCCTTTCGGG--------HHHHH--HHHHHHHHHHCS
T ss_pred ------ee------------ecCcCCeEEEEecCCCccccccccccHHHHHHH--------HHHHH--HHHHHHHHHhcC
Confidence 00 0012488899887322 2333334431 22221 122222222222
Q ss_pred CCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhccccccccccc
Q 008154 197 LGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWA 276 (576)
Q Consensus 197 ~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (576)
.+|||||+|.|.+++++.++++. .++|+|+|.|+...... ...+.....+.. .+
T Consensus 406 ------~~PDVIHsH~~~sglva~llar~-------~gvP~V~T~Hsl~~~k~------~~~~~~~~~~~~---~y---- 459 (816)
T 3s28_A 406 ------GKPDLIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKY------PDSDIYWKKLDD---KY---- 459 (816)
T ss_dssp ------SCCSEEEEEHHHHHHHHHHHHHH-------HTCCEEEECSCCHHHHS------TTTTTTHHHHHH---HH----
T ss_pred ------CCCeEEEeCCchHHHHHHHHHHH-------cCCCEEEEEeccccccc------ccccchhhhHHH---HH----
Confidence 17999999998888877777665 47999999998621100 000111111000 00
Q ss_pred ccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchh------h------hhhccCCceeEecCCCCCCCCC
Q 008154 277 RTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLH------E------ILSSRKSVLNGITNGIDITEWN 344 (576)
Q Consensus 277 ~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~------~------~~~~~~~~i~vi~nGvd~~~~~ 344 (576)
.....+..++.+++.||.|+++|+...+.+......+..+ + .+.....++.+||||||.+.|.
T Consensus 460 -----~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~ 534 (816)
T 3s28_A 460 -----HFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF 534 (816)
T ss_dssp -----CHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSC
T ss_pred -----HHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcC
Confidence 0011223466789999999999998877542210000000 0 0011223899999999999998
Q ss_pred CCCCccccccCCcCCcccchH-------hHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEE
Q 008154 345 PSSDEHIASHYSIDDLSGKVQ-------CKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFV 415 (576)
Q Consensus 345 ~~~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~li 415 (576)
|...... +...... +...+++.+|+...++.++|+|+||+.+.||++.+++|+.++.+ ++++|+
T Consensus 535 P~~~~~~-------Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~Lv 607 (816)
T 3s28_A 535 PYTEEKR-------RLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLV 607 (816)
T ss_dssp CTTCTTT-------CCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEE
T ss_pred ccchhhh-------hhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEE
Confidence 7653210 0000000 00112244555334678999999999999999999999999876 579999
Q ss_pred EEeCCCh----------hhHHHHHHHHHH-hcCceEEEccCC-----hhHHHHHHh-cCCEEEeCCCCCCCcHHHHHHHH
Q 008154 416 MLGSGDP----------QFESWMRDTEAT-YKDKYRGWVGFN-----VPISHRITA-GCDILLMPSRFEPCGLNQLYAMR 478 (576)
Q Consensus 416 i~G~g~~----------~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~ll~-~~Dv~v~ps~~E~~g~s~lEAma 478 (576)
|+|+|++ ..+...+.+.+. +..++. +.|+. .+.+..+++ ++|++|+||.+|+||++++||||
T Consensus 608 IvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~-flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA 686 (816)
T 3s28_A 608 VVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFR-WISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMT 686 (816)
T ss_dssp EECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEE-EECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHH
T ss_pred EEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEE-EccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHH
Confidence 9999962 223333333332 223444 44431 244456666 78999999999999999999999
Q ss_pred cCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---hhhCCHH
Q 008154 479 YGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWE 555 (576)
Q Consensus 479 ~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~---~~~fs~~ 555 (576)
||+|||+|+.||..|++.+ +.+|++++++|+++++++|.+++..+..|++.+.++++++. .++|||+
T Consensus 687 ~G~PVIasd~GG~~EiV~d----------g~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe 756 (816)
T 3s28_A 687 CGLPTFATCKGGPAEIIVH----------GKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQ 756 (816)
T ss_dssp TTCCEEEESSBTHHHHCCB----------TTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHH
T ss_pred cCCCEEEeCCCChHHHHcc----------CCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHH
Confidence 9999999999999999988 89999999999999999999988666679999999999883 4789999
Q ss_pred HHHHHHHHHHHHh
Q 008154 556 NAAIQYEQVFEWA 568 (576)
Q Consensus 556 ~~~~~y~~~y~~~ 568 (576)
.++++|.++|+..
T Consensus 757 ~~a~~ll~lY~~~ 769 (816)
T 3s28_A 757 IYSQRLLTLTGVY 769 (816)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=346.20 Aligned_cols=404 Identities=16% Similarity=0.132 Sum_probs=277.0
Q ss_pred CceEEEEeeccCCcc---------ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecC
Q 008154 65 SYNIVFVTAEAAPYS---------KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFG 135 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~---------~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (576)
+|||++++..++|.. ..||.++++.+++++|+++||+|+++++....... ..+....
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~--~~~~~~~------------ 72 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENW--PEFSGEI------------ 72 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTB--GGGCCSE------------
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccc--cchhhhH------------
Confidence 599999999887731 36999999999999999999999999976432110 0111000
Q ss_pred CeeEEEEEEee--ecCeEEEEecCCCCC--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeC
Q 008154 136 GEQEIAFFHEY--REGVDWVFVDHPSYH--RPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVN 211 (576)
Q Consensus 136 ~~~~~~~~~~~--~~gv~v~~l~~~~~~--~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~ 211 (576)
... .+|++++.++..... ....++ ..+..+...+.+.++... .+|||||+|
T Consensus 73 --------~~~~~~~gv~v~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~l~~~~------~~~Divh~~ 127 (499)
T 2r60_A 73 --------DYYQETNKVRIVRIPFGGDKFLPKEELW-----------PYLHEYVNKIINFYREEG------KFPQVVTTH 127 (499)
T ss_dssp --------EECTTCSSEEEEEECCSCSSCCCGGGCG-----------GGHHHHHHHHHHHHHHHT------CCCSEEEEE
T ss_pred --------HhccCCCCeEEEEecCCCcCCcCHHHHH-----------HHHHHHHHHHHHHHHhcC------CCCCEEEEc
Confidence 001 257888888633211 000011 011111222333332210 169999999
Q ss_pred CCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcC---CChhhhcccccccccccccccCCcCccch
Q 008154 212 DWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLG---LPSEWYGALEWVFPTWARTHALDTGEAVN 288 (576)
Q Consensus 212 ~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (576)
.+..++.+.++++. .++|+|+|.|+... ....... .....+... .. ......
T Consensus 128 ~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~------~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~ 182 (499)
T 2r60_A 128 YGDGGLAGVLLKNI-------KGLPFTFTGHSLGA------QKMEKLNVNTSNFKEMDER-FK-----------FHRRII 182 (499)
T ss_dssp HHHHHHHHHHHHHH-------HCCCEEEECSSCHH------HHHHTTCCCSTTSHHHHHH-HC-----------HHHHHH
T ss_pred CCcchHHHHHHHHh-------cCCcEEEEccCccc------ccchhhccCCCCcchhhhh-HH-----------HHHHHH
Confidence 87666555555443 46899999998521 0001000 000000000 00 001123
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhh--hh-c----cCCceeEecCCCCCCCCCCCCCccccccCCcCCcc
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEI--LS-S----RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 361 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~--~~-~----~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~ 361 (576)
+++.+++.||.++++|+..++.+.. . ++ . ...++.+||||+|.+.|.+....
T Consensus 183 ~~~~~~~~ad~vi~~S~~~~~~~~~---------~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~------------ 241 (499)
T 2r60_A 183 AERLTMSYADKIIVSTSQERFGQYS---------HDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGD------------ 241 (499)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHTTT---------SGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCH------------
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHh---------hhcccccccccCCCCeEEECCCcChhhcCccchh------------
Confidence 5677889999999999998876532 2 23 2 45689999999998888765421
Q ss_pred cchHhHHHHHHHcC-----CCCCCCCCEEEEecccccccCHHHHHHHHHhhhcC---CcEEEEEeCCChh----------
Q 008154 362 GKVQCKIALQKELG-----LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD---DIQFVMLGSGDPQ---------- 423 (576)
Q Consensus 362 ~~~~~~~~~~~~~~-----i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~---~~~lii~G~g~~~---------- 423 (576)
..+..+++.+| ++ ++.++|+|+||+.+.||++.+++|++.+.+. .++++|+|+.+..
T Consensus 242 ---~~~~~~r~~~~~~~~~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~ 316 (499)
T 2r60_A 242 ---KIKAKITKYLERDLGSER--MELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQE 316 (499)
T ss_dssp ---HHHHHHHHHHHHHSCGGG--TTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHH
T ss_pred ---hhHHHHHHHhcccccccC--CCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCccccccccccc
Confidence 11356677777 65 4678999999999999999999999998652 4689999983211
Q ss_pred ----hHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcC----CEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccc
Q 008154 424 ----FESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGC----DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDT 494 (576)
Q Consensus 424 ----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~----Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~ 494 (576)
.++..+.+.+. +..++.+....+.+.+..+|+.| |++|+||.+|+||++++|||+||+|||+|+.||..|+
T Consensus 317 ~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~ 396 (499)
T 2r60_A 317 EKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEI 396 (499)
T ss_dssp HHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHH
T ss_pred chHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHH
Confidence 23333333332 23455544333556677899999 9999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 495 VENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 495 i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
+.+ +.+|++++++|+++++++|.+++. |++.+.++++++ +.++|||++++++|.++|+++++.
T Consensus 397 v~~----------~~~g~l~~~~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 397 LDG----------GKYGVLVDPEDPEDIARGLLKAFE----SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp TGG----------GTSSEEECTTCHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred hcC----------CceEEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 998 789999999999999999999875 888888888877 345699999999999999999865
Q ss_pred C
Q 008154 572 P 572 (576)
Q Consensus 572 ~ 572 (576)
.
T Consensus 463 ~ 463 (499)
T 2r60_A 463 K 463 (499)
T ss_dssp -
T ss_pred h
Confidence 4
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=336.15 Aligned_cols=398 Identities=16% Similarity=0.182 Sum_probs=274.4
Q ss_pred ccCCCceEEEEeeccCCcc-----ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecC
Q 008154 61 QTRVSYNIVFVTAEAAPYS-----KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFG 135 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~-----~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (576)
...++|||++++..++|.. ..||.++++.+++++|+++||+|+++++....... .
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~--~------------------ 75 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG--E------------------ 75 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC--S------------------
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc--c------------------
Confidence 3456799999999888731 36999999999999999999999999976422100 0
Q ss_pred CeeEEEEEEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhh-cccCCCCCCCCCCccEEEeCCCc
Q 008154 136 GEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEA-PLVLPLGGFTYGEKCIFLVNDWH 214 (576)
Q Consensus 136 ~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~pDVvH~~~~~ 214 (576)
.....++++++.++...+.. ... . +....+..+.....+. ++... +|||||+|.+.
T Consensus 76 -------~~~~~~~v~v~~~~~~~~~~----~~~--~---~~~~~~~~~~~~~~~~~~~~~~-------~~Div~~~~~~ 132 (438)
T 3c48_A 76 -------IVRVAENLRVINIAAGPYEG----LSK--E---ELPTQLAAFTGGMLSFTRREKV-------TYDLIHSHYWL 132 (438)
T ss_dssp -------EEEEETTEEEEEECCSCSSS----CCG--G---GGGGGHHHHHHHHHHHHHHHTC-------CCSEEEEEHHH
T ss_pred -------cccccCCeEEEEecCCCccc----cch--h---HHHHHHHHHHHHHHHHHHhccC-------CCCEEEeCCcc
Confidence 01123678888886433211 000 0 0011111222222222 21111 48999999876
Q ss_pred cchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHH
Q 008154 215 AGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAI 294 (576)
Q Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 294 (576)
.++...++.+. .++|+|+|.|+..... ...+.... .... .....+++.++
T Consensus 133 ~~~~~~~~~~~-------~~~p~v~~~h~~~~~~------~~~~~~~~-~~~~----------------~~~~~~~~~~~ 182 (438)
T 3c48_A 133 SGQVGWLLRDL-------WRIPLIHTAHTLAAVK------NSYRDDSD-TPES----------------EARRICEQQLV 182 (438)
T ss_dssp HHHHHHHHHHH-------HTCCEEEECSSCHHHH------SCC----C-CHHH----------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------cCCCEEEEecCCcccc------cccccccC-Ccch----------------HHHHHHHHHHH
Confidence 66555554443 3689999999752100 00000000 0000 00113567788
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHc
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 374 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 374 (576)
+.+|.++++|+..++.+. ..++.+..++.+||||+|.+.|.+.... ....+++.+
T Consensus 183 ~~~d~ii~~s~~~~~~~~---------~~~g~~~~k~~vi~ngvd~~~~~~~~~~----------------~~~~~r~~~ 237 (438)
T 3c48_A 183 DNADVLAVNTQEEMQDLM---------HHYDADPDRISVVSPGADVELYSPGNDR----------------ATERSRREL 237 (438)
T ss_dssp HHCSEEEESSHHHHHHHH---------HHHCCCGGGEEECCCCCCTTTSCCC--------------------CHHHHHHT
T ss_pred hcCCEEEEcCHHHHHHHH---------HHhCCChhheEEecCCccccccCCcccc----------------hhhhhHHhc
Confidence 999999999998887653 2345556789999999998888665321 023467888
Q ss_pred CCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C--CcEEEEEeC----CChhhHHHHHHHHHH-hcCceEEEccC
Q 008154 375 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D--DIQFVMLGS----GDPQFESWMRDTEAT-YKDKYRGWVGF 445 (576)
Q Consensus 375 ~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~--~~~lii~G~----g~~~~~~~~~~~~~~-~~~~~~~~~~~ 445 (576)
+++ ++.++|+|+||+.+.||++.+++|+..+.+ + +++|+|+|+ |+ ..+...+.+.+. ...++.+....
T Consensus 238 ~~~--~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~-~~~~l~~~~~~~~l~~~v~~~g~~ 314 (438)
T 3c48_A 238 GIP--LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA-TPDTYRHMAEELGVEKRIRFLDPR 314 (438)
T ss_dssp TCC--SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-------CHHHHHHHHTTCTTTEEEECCC
T ss_pred CCC--CCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc-HHHHHHHHHHHcCCCCcEEEcCCC
Confidence 886 567899999999999999999999999975 2 799999998 53 223333333332 23455544333
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHH
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 525 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~ 525 (576)
+.+.+..+|+.||++|+||.+|++|++++|||+||+|||+++.|+..|.+.+ +.+|++++++|+++++++
T Consensus 315 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~d~~~la~~ 384 (438)
T 3c48_A 315 PPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAE----------GETGLLVDGHSPHAWADA 384 (438)
T ss_dssp CHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCB----------TTTEEEESSCCHHHHHHH
T ss_pred ChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhC----------CCcEEECCCCCHHHHHHH
Confidence 5566778999999999999999999999999999999999999999999988 889999999999999999
Q ss_pred HHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 526 LRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 526 i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
|.+++. |++.+.++++++. .+.|+|++++++|.++|+++++++.
T Consensus 385 i~~l~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 385 LATLLD----DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp HHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHc----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhcc
Confidence 999986 8888888888772 3349999999999999999987653
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=320.79 Aligned_cols=371 Identities=18% Similarity=0.206 Sum_probs=256.3
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|+.-+.+..+ |. .||.++++.+++++|+++||+|+++++..+... ..
T Consensus 14 ~~~~~~~~~~-p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~------------------------------~~ 60 (394)
T 2jjm_A 14 MKLKIGITCY-PS--VGGSGVVGTELGKQLAERGHEIHFITSGLPFRL------------------------------NK 60 (394)
T ss_dssp -CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC----------------------------------C
T ss_pred heeeeehhcC-CC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc------------------------------cc
Confidence 5555555554 52 699999999999999999999999986532110 00
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
..+++.+..++.+.+.. +.. ....+ .+...+.+.++.. +|||||+|.........++..+
T Consensus 61 ~~~~i~~~~~~~~~~~~----~~~-------~~~~~-~~~~~l~~~l~~~--------~~Dvv~~~~~~~~~~~~~~~~~ 120 (394)
T 2jjm_A 61 VYPNIYFHEVTVNQYSV----FQY-------PPYDL-ALASKMAEVAQRE--------NLDILHVHYAIPHAICAYLAKQ 120 (394)
T ss_dssp CCTTEEEECCCCC--------CCS-------CCHHH-HHHHHHHHHHHHH--------TCSEEEECSSTTHHHHHHHHHH
T ss_pred cCCceEEEecccccccc----ccc-------ccccH-HHHHHHHHHHHHc--------CCCEEEEcchhHHHHHHHHHHH
Confidence 11345444443222110 100 00111 1112223333222 7999999976544333333332
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
... .++|+|+|.|+... ...+.. .....+++.+++.||.++++|+
T Consensus 121 ~~~----~~~p~v~~~h~~~~---------~~~~~~----------------------~~~~~~~~~~~~~ad~ii~~s~ 165 (394)
T 2jjm_A 121 MIG----ERIKIVTTLHGTDI---------TVLGSD----------------------PSLNNLIRFGIEQSDVVTAVSH 165 (394)
T ss_dssp HTT----TCSEEEEECCHHHH---------HTTTTC----------------------TTTHHHHHHHHHHSSEEEESCH
T ss_pred hhc----CCCCEEEEEecCcc---------cccCCC----------------------HHHHHHHHHHHhhCCEEEECCH
Confidence 210 25899999997411 000000 0012356778899999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+.+. ..+.. ..++.+||||+|.+.|.+.. ...+++.++++ ++.++|
T Consensus 166 ~~~~~~~---------~~~~~-~~~~~vi~ngv~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~i 214 (394)
T 2jjm_A 166 SLINETH---------ELVKP-NKDIQTVYNFIDERVYFKRD-------------------MTQLKKEYGIS--ESEKIL 214 (394)
T ss_dssp HHHHHHH---------HHTCC-SSCEEECCCCCCTTTCCCCC-------------------CHHHHHHTTCC-----CEE
T ss_pred HHHHHHH---------HhhCC-cccEEEecCCccHHhcCCcc-------------------hHHHHHHcCCC--CCCeEE
Confidence 9887753 22222 46899999999988887654 24567778886 467899
Q ss_pred EEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+|+||+.+.||++.+++|++.+.+ .+++|+|+|+|+ ..++..+.+.+. ...++. +.++..+ +..+|+.||++|+|
T Consensus 215 ~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~l~~~~~~~~l~~~v~-~~g~~~~-~~~~~~~adv~v~p 291 (394)
T 2jjm_A 215 IHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP-EFCTILQLVKNLHIEDRVL-FLGKQDN-VAELLAMSDLMLLL 291 (394)
T ss_dssp EEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT-THHHHHHHHHTTTCGGGBC-CCBSCSC-THHHHHTCSEEEEC
T ss_pred EEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch-HHHHHHHHHHHcCCCCeEE-EeCchhh-HHHHHHhCCEEEec
Confidence 999999999999999999999976 479999999985 334444444332 123443 4445443 45799999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++|||+||+|||+++.|+..|++.+ +.+|++++++|+++++++|.+++. |++.+.++
T Consensus 292 s~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~----------~~~g~~~~~~d~~~la~~i~~l~~----~~~~~~~~ 357 (394)
T 2jjm_A 292 SEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQH----------GDTGYLCEVGDTTGVADQAIQLLK----DEELHRNM 357 (394)
T ss_dssp CSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCB----------TTTEEEECTTCHHHHHHHHHHHHH----CHHHHHHH
T ss_pred cccCCCchHHHHHHhcCCCEEEecCCChHHHhhc----------CCceEEeCCCCHHHHHHHHHHHHc----CHHHHHHH
Confidence 9999999999999999999999999999999988 889999999999999999999986 88888888
Q ss_pred HHHH---HhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 544 MRRG---MEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 544 ~~~a---~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
++++ +.++|||++++++|.++|+++++..
T Consensus 358 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 358 GERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 8877 3478999999999999999988654
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=320.91 Aligned_cols=368 Identities=18% Similarity=0.194 Sum_probs=270.0
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
++|||++++..++|. .||.++++..++++| .||+|+++++...... ...+.
T Consensus 3 ~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~--~~~~~----------------------- 53 (394)
T 3okp_A 3 ASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEE--AHAYD----------------------- 53 (394)
T ss_dssp -CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHH--HHHHH-----------------------
T ss_pred CCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccc--hhhhc-----------------------
Confidence 469999999988773 799999999999999 6999999998643210 00111
Q ss_pred EeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 144 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 144 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
...+++++.++...... .. .....+.+.++.. +|||||+|..........+.
T Consensus 54 --~~~~~~~~~~~~~~~~~--------------~~----~~~~~l~~~~~~~--------~~Dvv~~~~~~~~~~~~~~~ 105 (394)
T 3okp_A 54 --KTLDYEVIRWPRSVMLP--------------TP----TTAHAMAEIIRER--------EIDNVWFGAAAPLALMAGTA 105 (394)
T ss_dssp --TTCSSEEEEESSSSCCS--------------CH----HHHHHHHHHHHHT--------TCSEEEESSCTTGGGGHHHH
T ss_pred --cccceEEEEcccccccc--------------ch----hhHHHHHHHHHhc--------CCCEEEECCcchHHHHHHHH
Confidence 11357777775322111 01 1112223333323 79999999755443323223
Q ss_pred hhccCCCCCCCCc-EEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 224 SKYRPHGVYKDAR-SILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 224 ~~~~~~~~~~~~~-~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
++ .++| +|++.|+... ... .. .....+++..++.+|.+++
T Consensus 106 ~~-------~~~~~~i~~~h~~~~---------~~~-~~----------------------~~~~~~~~~~~~~~d~ii~ 146 (394)
T 3okp_A 106 KQ-------AGASKVIASTHGHEV---------GWS-ML----------------------PGSRQSLRKIGTEVDVLTY 146 (394)
T ss_dssp HH-------TTCSEEEEECCSTHH---------HHT-TS----------------------HHHHHHHHHHHHHCSEEEE
T ss_pred Hh-------cCCCcEEEEeccchh---------hhh-hc----------------------chhhHHHHHHHHhCCEEEE
Confidence 22 3565 8899996411 000 00 0012356777899999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+...+.+. +.+. ...++.+||||+|.+.|.+.... .+..+++.++++ ++.
T Consensus 147 ~s~~~~~~~~---------~~~~-~~~~~~vi~ngv~~~~~~~~~~~----------------~~~~~~~~~~~~--~~~ 198 (394)
T 3okp_A 147 ISQYTLRRFK---------SAFG-SHPTFEHLPSGVDVKRFTPATPE----------------DKSATRKKLGFT--DTT 198 (394)
T ss_dssp SCHHHHHHHH---------HHHC-SSSEEEECCCCBCTTTSCCCCHH----------------HHHHHHHHTTCC--TTC
T ss_pred cCHHHHHHHH---------HhcC-CCCCeEEecCCcCHHHcCCCCch----------------hhHHHHHhcCCC--cCc
Confidence 9999887763 2222 35789999999999888764322 257788889987 567
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..+..+.+......++.+....+.+.+..+++.||++
T Consensus 199 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 276 (394)
T 3okp_A 199 PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIF 276 (394)
T ss_dssp CEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEE
T ss_pred eEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEE
Confidence 999999999999999999999999876 589999999985 2333333334444566554444666777899999999
Q ss_pred EeCCCC-------CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 461 LMPSRF-------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 461 v~ps~~-------E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
|+||.+ |++|++++|||++|+|||+++.|+..|.+.+ + +|++++++|+++++++|.+++.
T Consensus 277 v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----------~-~g~~~~~~d~~~l~~~i~~l~~-- 343 (394)
T 3okp_A 277 AMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP----------A-TGLVVEGSDVDKLSELLIELLD-- 343 (394)
T ss_dssp EECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCT----------T-TEEECCTTCHHHHHHHHHHHHT--
T ss_pred EecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhc----------C-CceEeCCCCHHHHHHHHHHHHh--
Confidence 999999 9999999999999999999999999999998 7 9999999999999999999875
Q ss_pred hhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 534 REHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 534 ~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
|++.+.++++++ +.++|||++++++|.++|+++.+..
T Consensus 344 --~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~ 383 (394)
T 3okp_A 344 --DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKL 383 (394)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC--
T ss_pred --CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCc
Confidence 888888888877 3457999999999999999887543
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=307.29 Aligned_cols=362 Identities=15% Similarity=0.145 Sum_probs=246.6
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
++|||++++.. + ..||.++++.+++++|++.||+|++++..... ..+..... +.
T Consensus 39 ~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~-----~~~~~~~~----~~------------- 92 (416)
T 2x6q_A 39 KGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPT-----EFFNVTKT----FH------------- 92 (416)
T ss_dssp TTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH-----HHHHHHHH----HH-------------
T ss_pred hccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc-----chhhhhcc----cc-------------
Confidence 46999999975 2 36999999999999999999999999864221 01110000 00
Q ss_pred EeeecCeEEEEecCCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 144 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDN-QFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 144 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
....+.+. +. +. .. ...+..+.....+.++. .+|||||+|.+.......++
T Consensus 93 -~~~~~~~~-------~~-----~~-------~~~~~~~~~~~~~~~~~l~~--------~~~Dvv~~~~~~~~~~~~~~ 144 (416)
T 2x6q_A 93 -NALQGNES-------LK-----LT-------EEMKELYLNVNRENSKFIDL--------SSFDYVLVHDPQPAALIEFY 144 (416)
T ss_dssp -HHHTTCCS-------CC-----CC-------HHHHHHHHHHHHHHHHSSCG--------GGSSEEEEESSTTGGGGGGS
T ss_pred -eeeccccc-------cc-----cc-------HHHHHHHHHHHHHHHHHHhh--------cCCCEEEEeccchhhHHHHH
Confidence 00001100 00 00 11 11111122223333222 27999999987654432221
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhcccee-
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL- 301 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~- 301 (576)
. ..+|+|+|+|+..... .... ..+.+..+..+|.++
T Consensus 145 ~---------~~~p~v~~~h~~~~~~------------~~~~----------------------~~~~~~~~~~~~~~i~ 181 (416)
T 2x6q_A 145 E---------KKSPWLWRCHIDLSSP------------NREF----------------------WEFLRRFVEKYDRYIF 181 (416)
T ss_dssp C---------CCSCEEEECCSCCSSC------------CHHH----------------------HHHHHHHHTTSSEEEE
T ss_pred H---------hcCCEEEEEccccCCc------------cHHH----------------------HHHHHHHHHhCCEEEE
Confidence 1 2389999999753210 0000 112334456677665
Q ss_pred ccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCC
Q 008154 302 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 381 (576)
Q Consensus 302 ~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (576)
++|+...+.+ ...++.+||||+|...+.+.... ......+++.++++ ++
T Consensus 182 ~~s~~~~~~~---------------~~~~~~vi~ngvd~~~~~~~~~~--------------~~~~~~~r~~~~~~--~~ 230 (416)
T 2x6q_A 182 HLPEYVQPEL---------------DRNKAVIMPPSIDPLSEKNVELK--------------QTEILRILERFDVD--PE 230 (416)
T ss_dssp SSGGGSCTTS---------------CTTTEEECCCCBCTTSTTTSCCC--------------HHHHHHHHHHTTCC--TT
T ss_pred echHHHHhhC---------------CccceEEeCCCCChhhhcccccC--------------hhhHHHHHHHhCCC--CC
Confidence 6666444221 23678999999998766543211 12246678888887 57
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCCh---hhHHHHHHHHHHh--cCceEEEc---cCChhHHH
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP---QFESWMRDTEATY--KDKYRGWV---GFNVPISH 451 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~---~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~ 451 (576)
.++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+|+. ...+..+.+.+.. ..++.+.. ..+.+.+.
T Consensus 231 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~ 310 (416)
T 2x6q_A 231 KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVN 310 (416)
T ss_dssp SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHH
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHH
Confidence 7899999999999999999999999976 5899999999953 2233333333332 23444332 22345677
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.+++.||++|+||.+|++|++++|||+||+|||+++.||..|.+.+ +.+|++++ |+++++++|.+++.
T Consensus 311 ~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~----------~~~g~l~~--d~~~la~~i~~ll~ 378 (416)
T 2x6q_A 311 AFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVD----------GETGFLVR--DANEAVEVVLYLLK 378 (416)
T ss_dssp HHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCB----------TTTEEEES--SHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheec----------CCCeEEEC--CHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999988 88999997 89999999999886
Q ss_pred HhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhh
Q 008154 532 TYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
|++.+.++++++ +.++|||++++++|.++|++++
T Consensus 379 ----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 379 ----HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred ----CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 888888888877 3468999999999999998765
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=315.40 Aligned_cols=363 Identities=15% Similarity=0.126 Sum_probs=254.7
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++..+.| .||.++++.+++++|+++||+|+++++......
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-------------------------------- 45 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC-------------------------------- 45 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC--------------------------------
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC--------------------------------
Confidence 899999998777 599999999999999999999999996532210
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
.++++++.++.+.+ ....+...+...+.+.++.. +|||||+|.+.+++...+...
T Consensus 46 -~~~~~v~~~~~~~~---------------~~~~~~~~~~~~l~~~i~~~--------~~Dvv~~~~~~~~~~~~~~~~- 100 (374)
T 2iw1_A 46 -PKAFELIQVPVKSH---------------TNHGRNAEYYAWVQNHLKEH--------PADRVVGFNKMPGLDVYFAAD- 100 (374)
T ss_dssp -CTTCEEEECCCCCS---------------SHHHHHHHHHHHHHHHHHHS--------CCSEEEESSCCTTCSEEECCS-
T ss_pred -CCCcEEEEEccCcc---------------cchhhHHHHHHHHHHHHhcc--------CCCEEEEecCCCCceeeeccc-
Confidence 13667776653221 11222222333334443333 799999997544321000000
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHH--hccceecc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV--TADRLLTV 303 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~ad~v~~v 303 (576)
. ..++.+.+.|... .. ..... .....+++..+. .+|.++++
T Consensus 101 ~------~~~~~~~~~~~~~----------~~--~~~~~-------------------~~~~~~~~~~~~~~~~d~ii~~ 143 (374)
T 2iw1_A 101 V------CYAEKVAQEKGFL----------YR--LTSRY-------------------RHYAAFERATFEQGKSTKLMML 143 (374)
T ss_dssp C------CHHHHHHHHCCHH----------HH--TSHHH-------------------HHHHHHHHHHHSTTCCCEEEES
T ss_pred c------ccceeeeecccch----------hh--hcHHH-------------------HHHHHHHHHHhhccCCcEEEEc
Confidence 0 1122222223210 00 00000 000123343443 69999999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|+...+.+. ..++.+..++.+||||+|.+.|.+.... ..+..+++.++++ ++.+
T Consensus 144 s~~~~~~~~---------~~~~~~~~~~~vi~ngv~~~~~~~~~~~---------------~~~~~~~~~~~~~--~~~~ 197 (374)
T 2iw1_A 144 TDKQIADFQ---------KHYQTEPERFQILPPGIYPDRKYSEQIP---------------NSREIYRQKNGIK--EQQN 197 (374)
T ss_dssp CHHHHHHHH---------HHHCCCGGGEEECCCCCCGGGSGGGSCT---------------THHHHHHHHTTCC--TTCE
T ss_pred CHHHHHHHH---------HHhCCChhheEEecCCcCHHhcCcccch---------------hHHHHHHHHhCCC--CCCe
Confidence 998887753 2345556789999999998877654321 1245678889987 5678
Q ss_pred EEEEecccccccCHHHHHHHHHhhhc---CCcEEEEEeCCChhhHHHHHHHHHHh-cCceEEEccCChhHHHHHHhcCCE
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILA---DDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~---~~~~lii~G~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
+++|+||+.+.||++.+++|+..+.+ ++++|+|+|+++. +...+.+.+.. ..++. +.++..+ +..+++.||+
T Consensus 198 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~~v~-~~g~~~~-~~~~~~~ad~ 273 (374)
T 2iw1_A 198 LLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP--RKFEALAEKLGVRSNVH-FFSGRND-VSELMAAADL 273 (374)
T ss_dssp EEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC--HHHHHHHHHHTCGGGEE-EESCCSC-HHHHHHHCSE
T ss_pred EEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH--HHHHHHHHHcCCCCcEE-ECCCccc-HHHHHHhcCE
Confidence 99999999999999999999999865 3899999999862 44444444322 33454 4455444 5689999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeC-CCCHHHHHHHHHHHHHHhhhCHH
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL-PLSEESMLTALRFAIRTYREHKS 538 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~-~~d~~~la~~i~~~l~~~~~~~~ 538 (576)
+|+||.+|++|++++|||++|+|||+++.|+..|.+.+ +.+|++++ ++|+++++++|.+++. |++
T Consensus 274 ~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~----------~~~g~~~~~~~~~~~l~~~i~~l~~----~~~ 339 (374)
T 2iw1_A 274 LLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIAD----------ANCGTVIAEPFSQEQLNEVLRKALT----QSP 339 (374)
T ss_dssp EEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHH----------HTCEEEECSSCCHHHHHHHHHHHHH----CHH
T ss_pred EEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhcc----------CCceEEeCCCCCHHHHHHHHHHHHc----ChH
Confidence 99999999999999999999999999999999999998 89999997 8899999999999986 888
Q ss_pred HHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhh
Q 008154 539 SWEGLMRRG--MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 539 ~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
.+.++++++ ..++++|+.+++++.++++..+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 340 LRMAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 888998887 3467899999999999887654
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=306.83 Aligned_cols=368 Identities=17% Similarity=0.184 Sum_probs=252.2
Q ss_pred hccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeE
Q 008154 60 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQE 139 (576)
Q Consensus 60 ~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (576)
....++|||++++..++| ..||.++++..++++|+++||+|+++++....... +. +.
T Consensus 15 ~~~~~~MkIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-~~-~~------------------- 71 (406)
T 2gek_A 15 VPRGSHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKL-PD-YV------------------- 71 (406)
T ss_dssp ------CEEEEECSSCTT--SCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCC-CT-TE-------------------
T ss_pred ccCCCcceEEEEeccCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccC-Cc-cc-------------------
Confidence 344567999999976544 36999999999999999999999999976433200 00 00
Q ss_pred EEEEEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHH
Q 008154 140 IAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVP 219 (576)
Q Consensus 140 ~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~ 219 (576)
...+ +++.++......+ +. + . .. ....+.+.++.. +|||||+|........
T Consensus 72 ------~~~~-~~~~~~~~~~~~~--~~------~-~-~~----~~~~l~~~l~~~--------~~Dii~~~~~~~~~~~ 122 (406)
T 2gek_A 72 ------VSGG-KAVPIPYNGSVAR--LR------F-G-PA----THRKVKKWIAEG--------DFDVLHIHEPNAPSLS 122 (406)
T ss_dssp ------EECC-CCC--------------------C-C-HH----HHHHHHHHHHHH--------CCSEEEEECCCSSSHH
T ss_pred ------ccCC-cEEeccccCCccc--cc------c-c-HH----HHHHHHHHHHhc--------CCCEEEECCccchHHH
Confidence 0011 2222210000000 00 0 0 00 111222222222 7999999987666554
Q ss_pred HHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccc
Q 008154 220 VLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADR 299 (576)
Q Consensus 220 ~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~ 299 (576)
..+... .++|+|++.|+... ... ..... ..+.+.+++.+|.
T Consensus 123 ~~~~~~-------~~~~~i~~~h~~~~-----~~~---------~~~~~------------------~~~~~~~~~~~d~ 163 (406)
T 2gek_A 123 MLALQA-------AEGPIVATFHTSTT-----KSL---------TLSVF------------------QGILRPYHEKIIG 163 (406)
T ss_dssp HHHHHH-------EESSEEEEECCCCC-----SHH---------HHHHH------------------HSTTHHHHTTCSE
T ss_pred HHHHHh-------cCCCEEEEEcCcch-----hhh---------hHHHH------------------HHHHHHHHhhCCE
Confidence 444332 36899999998521 110 00000 0122366789999
Q ss_pred eeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCC
Q 008154 300 LLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIR 379 (576)
Q Consensus 300 v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 379 (576)
++++|+...+.+. +.+ +..++ +||||+|.+.|.+.... .+++
T Consensus 164 ii~~s~~~~~~~~---------~~~--~~~~~-vi~~~v~~~~~~~~~~~------------------------~~~~-- 205 (406)
T 2gek_A 164 RIAVSDLARRWQM---------EAL--GSDAV-EIPNGVDVASFADAPLL------------------------DGYP-- 205 (406)
T ss_dssp EEESSHHHHHHHH---------HHH--SSCEE-ECCCCBCHHHHHTCCCC------------------------TTCS--
T ss_pred EEECCHHHHHHHH---------Hhc--CCCcE-EecCCCChhhcCCCchh------------------------hhcc--
Confidence 9999998877653 222 34578 99999997665443311 1122
Q ss_pred CCCCEEEEeccc-ccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhc
Q 008154 380 PDCPLIGFIGRL-DYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 456 (576)
Q Consensus 380 ~~~~~i~~~Gr~-~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 456 (576)
.+..+|+|+||+ .+.||++.+++|+..+.+ ++++|+|+|+++. +...+.+. .+..++.+....+.+.+..+|+.
T Consensus 206 ~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~l~~~~~-~~~~~v~~~g~~~~~~~~~~~~~ 282 (406)
T 2gek_A 206 REGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE--DELREQAG-DLAGHLRFLGQVDDATKASAMRS 282 (406)
T ss_dssp CSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH--HHHHHHTG-GGGGGEEECCSCCHHHHHHHHHH
T ss_pred CCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH--HHHHHHHH-hccCcEEEEecCCHHHHHHHHHH
Confidence 245799999999 999999999999999976 5899999999963 44444333 33445554333355666789999
Q ss_pred CCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhh
Q 008154 457 CDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535 (576)
Q Consensus 457 ~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~ 535 (576)
||++|+||. .|++|++++|||++|+|||+++.|+..|.+.+ +.+|++++++|+++++++|.+++.
T Consensus 283 adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~d~~~l~~~i~~l~~---- 348 (406)
T 2gek_A 283 ADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD----------GDAGRLVPVDDADGMAAALIGILE---- 348 (406)
T ss_dssp SSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTT----------TTSSEECCTTCHHHHHHHHHHHHH----
T ss_pred CCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcC----------CCceEEeCCCCHHHHHHHHHHHHc----
Confidence 999999996 99999999999999999999999999999998 899999999999999999999986
Q ss_pred CHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 536 HKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 536 ~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
|++.+.++++++ ..++|+|++++++|.++|++++++.+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 349 DDQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp CHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTTC
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcc
Confidence 888888888877 33499999999999999999987554
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-35 Score=305.25 Aligned_cols=231 Identities=16% Similarity=0.147 Sum_probs=185.8
Q ss_pred HHHHhcc--ceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHH
Q 008154 292 GAIVTAD--RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIA 369 (576)
Q Consensus 292 ~a~~~ad--~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 369 (576)
..++.+| .++++|+...+.+.. +.. ..++.+||||+|.+.|. .
T Consensus 127 ~~~~~~~~~~ii~~S~~~~~~~~~----------~~~-~~~~~vi~ngvd~~~~~------------------------~ 171 (413)
T 3oy2_A 127 WIFSHPKVVGVMAMSKCWISDICN----------YGC-KVPINIVSHFVDTKTIY------------------------D 171 (413)
T ss_dssp GGGGCTTEEEEEESSTHHHHHHHH----------TTC-CSCEEECCCCCCCCCCT------------------------T
T ss_pred HHHhccCCceEEEcCHHHHHHHHH----------cCC-CCceEEeCCCCCHHHHH------------------------H
Confidence 3456777 999999998877642 232 57899999999988771 1
Q ss_pred HHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChh----hHHHHHHHHHHh--cCc---
Q 008154 370 LQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ----FESWMRDTEATY--KDK--- 438 (576)
Q Consensus 370 ~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~----~~~~~~~~~~~~--~~~--- 438 (576)
.++.++++...+.++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+|++. ..+..+.+.+.. ..+
T Consensus 172 ~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~ 251 (413)
T 3oy2_A 172 ARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTH 251 (413)
T ss_dssp HHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHH
T ss_pred HHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCccccccc
Confidence 3556777632368999999999999999999999999865 68999999999642 123333333332 222
Q ss_pred ---eEEEccC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcc----
Q 008154 439 ---YRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGT---- 510 (576)
Q Consensus 439 ---~~~~~~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~---- 510 (576)
++.+.++ +.+.+..+|+.||++|+||.+|+||++++|||+||+|||+|+.||..|++.+ +.+
T Consensus 252 l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~----------~~~~~i~ 321 (413)
T 3oy2_A 252 LNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSG----------DCVYKIK 321 (413)
T ss_dssp HTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCT----------TTSEEEC
T ss_pred ccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHcc----------Ccccccc
Confidence 4566675 6667778999999999999999999999999999999999999999999987 565
Q ss_pred -----------ee--EeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---hhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 511 -----------GW--SFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 511 -----------G~--~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~---~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
|+ +++++|+++++++| +++. |++.+.++++++. .++|||++++++|.++|++++++.
T Consensus 322 ~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 322 PSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFK----DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp CCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTT----SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred cccccccccccCcceeeCCCCHHHHHHHH-HHhc----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 99 99999999999999 8875 8888899988873 468999999999999999998643
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=296.57 Aligned_cols=317 Identities=15% Similarity=0.093 Sum_probs=234.0
Q ss_pred CceEEEEeec--------c---CCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEee
Q 008154 65 SYNIVFVTAE--------A---APYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICC 133 (576)
Q Consensus 65 ~mkI~~~s~e--------~---~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (576)
+|||++++.. + +| ...||.++++.+++++|+++||+|+++++......
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-------------------- 61 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-------------------- 61 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC--------------------
T ss_pred ccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC--------------------
Confidence 5999999998 3 44 24699999999999999999999999987532210
Q ss_pred cCCeeEEEEEEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCC
Q 008154 134 FGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW 213 (576)
Q Consensus 134 ~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~ 213 (576)
.++++++.. .... .+.+.++.. +|||||+|.+
T Consensus 62 -------------~~~~~~~~~--------------------~~~~-------~l~~~l~~~--------~~Dvi~~~~~ 93 (342)
T 2iuy_A 62 -------------RPGLTVVPA--------------------GEPE-------EIERWLRTA--------DVDVVHDHSG 93 (342)
T ss_dssp -------------STTEEECSC--------------------CSHH-------HHHHHHHHC--------CCSEEEECSS
T ss_pred -------------CCcceeccC--------------------CcHH-------HHHHHHHhc--------CCCEEEECCc
Confidence 022332110 0011 122222222 7999999987
Q ss_pred ccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHH
Q 008154 214 HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGA 293 (576)
Q Consensus 214 ~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 293 (576)
...+.. .+. .++| |+|.|+.....
T Consensus 94 ~~~~~~----~~~------~~~p-v~~~h~~~~~~--------------------------------------------- 117 (342)
T 2iuy_A 94 GVIGPA----GLP------PGTA-FISSHHFTTRP--------------------------------------------- 117 (342)
T ss_dssp SSSCST----TCC------TTCE-EEEEECSSSBC---------------------------------------------
T ss_pred hhhHHH----Hhh------cCCC-EEEecCCCCCc---------------------------------------------
Confidence 654422 111 5789 99999752100
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
..+|.++++|+..++.+. . ..++.+||||+|.+.|.+....
T Consensus 118 -~~~d~ii~~S~~~~~~~~-------------~-~~~~~vi~ngvd~~~~~~~~~~------------------------ 158 (342)
T 2iuy_A 118 -VNPVGCTYSSRAQRAHCG-------------G-GDDAPVIPIPVDPARYRSAADQ------------------------ 158 (342)
T ss_dssp -SCCTTEEESCHHHHHHTT-------------C-CTTSCBCCCCBCGGGSCCSTTC------------------------
T ss_pred -ccceEEEEcCHHHHHHHh-------------c-CCceEEEcCCCChhhcCccccc------------------------
Confidence 018999999998876652 1 5678999999998777654321
Q ss_pred cCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHH
Q 008154 374 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 453 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 453 (576)
. ++..+|+|+||+.+.||++.+++|++.+ +++|+|+|+|+ ..+..+.+.+....++.+....+.+.+..+
T Consensus 159 --~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~ 228 (342)
T 2iuy_A 159 --V---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVEPIGEVGGERRLDL 228 (342)
T ss_dssp --C---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEEECCCCCHHHHHHH
T ss_pred --C---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEeccCCHHHHHHH
Confidence 1 2456899999999999999999999998 89999999995 333444444444456654333356666789
Q ss_pred HhcCCEEEeCCC----------CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHH
Q 008154 454 TAGCDILLMPSR----------FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESML 523 (576)
Q Consensus 454 l~~~Dv~v~ps~----------~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la 523 (576)
|+.||++|+||. .|++|++++|||++|+|||+++.|+..|++.+. ++.+|+++++ |+++++
T Consensus 229 ~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~--------~~~~g~~~~~-d~~~l~ 299 (342)
T 2iuy_A 229 LASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSV--------GEVVGYGTDF-APDEAR 299 (342)
T ss_dssp HHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGG--------EEECCSSSCC-CHHHHH
T ss_pred HHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhccc--------CCCceEEcCC-CHHHHH
Confidence 999999999999 799999999999999999999999999998630 0368999999 999999
Q ss_pred HHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 524 TALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 524 ~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
++|.+++. .+.+++.+.++|||++++++|.++|++++++++
T Consensus 300 ~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 340 (342)
T 2iuy_A 300 RTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGAT 340 (342)
T ss_dssp HHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccCC
Confidence 99988753 222333356799999999999999999988765
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-31 Score=275.68 Aligned_cols=358 Identities=9% Similarity=0.018 Sum_probs=218.6
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEE
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 142 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (576)
.++|||++++..+.|....||.. .+.+++++|+++||+|+|+++..... .... ...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~~---~~~~-~~~------------------- 99 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATPN---PKDL-QSF------------------- 99 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCCC---HHHH-GGG-------------------
T ss_pred CCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCCC---hHHH-Hhh-------------------
Confidence 46799999999988832347775 58899999999999999999764211 0000 000
Q ss_pred EEeeecCeEEEEecCCC-CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHH
Q 008154 143 FHEYREGVDWVFVDHPS-YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 221 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~-~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~ 221 (576)
.+.....+.... +.. .+.. +.. .....+. ..+|||||+|.|.++.....
T Consensus 100 -----~~~~~~~~~~~~~~~~--~i~~-----~~~----------~~~~~~~--------~~~~Dvv~a~~~~~~~~~~~ 149 (413)
T 2x0d_A 100 -----KSFKYVMPEEDKDFAL--QIVP-----FND----------RYNRTIP--------VAKHDIFIATAWWTAYAAQR 149 (413)
T ss_dssp -----TTSEECCTTCCCCCSE--EEEE-----CSC----------CTTCCEE--------ECTTEEEEECSHHHHHHHHH
T ss_pred -----hccceeeccCCccccc--eeee-----ccc----------ccccccc--------CCCCCEEEEehHHHHHHHHH
Confidence 010000000000 000 0000 000 0000000 01689999998877665444
Q ss_pred HHhhcc-CCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhcc--
Q 008154 222 LASKYR-PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTAD-- 298 (576)
Q Consensus 222 l~~~~~-~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad-- 298 (576)
+..+.. ..+ ....+.++.+|+.... + .+.... ..+.+..++.++
T Consensus 150 ~~~~~~~~~~-~~~~~~~~~v~~~~~~-------~--~~~~~~-----------------------~~~~~~~~~~~~~~ 196 (413)
T 2x0d_A 150 IVSWQSDTYG-IPPNKILYIIQDFEPG-------F--YQWSSQ-----------------------YVLAESTYKYRGPQ 196 (413)
T ss_dssp HHHHHHHHHT-CCCCCEEEEECSCGGG-------G--SCSSHH-----------------------HHHHHHTTSCCSCE
T ss_pred hhhhhhhhcc-cccCcEEEEEeechhh-------c--CccChH-----------------------HHHHHHHhccCCce
Confidence 321100 000 0245777777764210 0 000000 012233344444
Q ss_pred ceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCC
Q 008154 299 RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPI 378 (576)
Q Consensus 299 ~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 378 (576)
.++++|+..++.+.+ .+....++.+++||+|.+.|.+.. .+ .
T Consensus 197 ~vi~~S~~~~~~l~~----------~g~~~~~~~~i~~g~d~~~~~~~~--------------------------~~-~- 238 (413)
T 2x0d_A 197 IAVFNSELLKQYFNN----------KGYNFTDEYFFQPKINTTLKNYIN--------------------------DK-R- 238 (413)
T ss_dssp EEEEESHHHHHHHHH----------HTCCCSEEEEECCCCCHHHHTTTT--------------------------SC-C-
T ss_pred EEEEcCHHHHHHHHH----------cCCCCCceEEeCCCcCchhhcccc--------------------------cc-c-
Confidence 588899998887642 122234688999999865433211 01 1
Q ss_pred CCCCCEEEEeccc-ccccCHHHHHHHHHhhhc--C---CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHH
Q 008154 379 RPDCPLIGFIGRL-DYQKGIDLIRLAAPEILA--D---DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHR 452 (576)
Q Consensus 379 ~~~~~~i~~~Gr~-~~~Kg~~~ll~a~~~L~~--~---~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (576)
++...|+++||+ .+.||++.+++|++.+.+ + +++|+++|+++... .+ ....++.+....+.+.+..
T Consensus 239 -~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~-----~l--~~~~~v~f~G~~~~~~l~~ 310 (413)
T 2x0d_A 239 -QKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI-----AL--GKGIHLNSLGKLTLEDYAD 310 (413)
T ss_dssp -CCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCE-----EE--ETTEEEEEEESCCHHHHHH
T ss_pred -CCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhh-----hc--CCcCcEEEcCCCCHHHHHH
Confidence 245678899997 589999999999999865 3 38999999986321 00 1122444333336677789
Q ss_pred HHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 453 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 453 ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
+|+.||++|+||.+|+||++++||||||+|||++ .+|..|++.+ +.+|++++++|+++++++|.+++.
T Consensus 311 ~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~----------~~~G~lv~~~d~~~la~ai~~ll~- 378 (413)
T 2x0d_A 311 LLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNW----------HSNIVSLEQLNPENIAETLVELCM- 378 (413)
T ss_dssp HHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGT----------BTTEEEESSCSHHHHHHHHHHHHH-
T ss_pred HHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhc----------CCCEEEeCCCCHHHHHHHHHHHHc-
Confidence 9999999999999999999999999999999995 5667899988 889999999999999999999987
Q ss_pred hhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 533 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
|++.+.+ +.+..+++|+|++++++ .+.|+++..
T Consensus 379 ---~~~~~~~-~~~~~~~~~~W~~~~~~-~~~~~~l~~ 411 (413)
T 2x0d_A 379 ---SFNNRDV-DKKESSNMMFYINEFNE-FSFIKEIEE 411 (413)
T ss_dssp ---HTC--------CCBSCGGGCCCC----TTHHHHHT
T ss_pred ---CHHHHHH-hHHHHHHhCCHHHHHHH-HHHHHHHHh
Confidence 3444444 22223468999999877 666766654
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-29 Score=260.38 Aligned_cols=200 Identities=14% Similarity=0.148 Sum_probs=154.5
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
+++.+++.||.++++|+..++.+.. .. ++.+||||+|.+.|.+....
T Consensus 171 ~~~~~~~~ad~vi~~S~~~~~~~~~-------------~~-~i~vipngvd~~~f~~~~~~------------------- 217 (406)
T 2hy7_A 171 EFDRVAPTLDVIALVSPAMAAEVVS-------------RD-NVFHVGHGVDHNLDQLGDPS------------------- 217 (406)
T ss_dssp HHHHHGGGCSEEEESCGGGGGGCSC-------------ST-TEEECCCCBCTTHHHHHCSC-------------------
T ss_pred HHHHHHHhCCEEEEcCHHHHHHHHh-------------cC-CEEEEcCCcChHhcCccccc-------------------
Confidence 5677889999999999988876531 11 89999999998766432210
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEEccCCh
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGWVGFNV 447 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 447 (576)
+ .++.++|+|+||+.+.||+ ++++.+. .++++|+|+|+|+ +++ ....++.+....+.
T Consensus 218 --------~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~---------~~~~~l~~~V~f~G~~~~ 275 (406)
T 2hy7_A 218 --------P-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM---------GRHPGYGDNVIVYGEMKH 275 (406)
T ss_dssp --------S-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS---------CCCTTCCTTEEEECCCCH
T ss_pred --------c-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch---------HHhcCCCCCEEEcCCCCH
Confidence 1 1233789999999999998 4444332 3689999999985 111 23345654433355
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHH-------HcCCceEEeCccccccccccccccccCCCCCcceeE-eCCCCH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAM-------RYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS-FLPLSE 519 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAm-------a~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~-~~~~d~ 519 (576)
+.+..+|+.||++|+||..|++|++++||| |||+|||+|+. +.+ +.+|++ ++++|+
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~----------~~~G~l~v~~~d~ 339 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVG----------PYKSRFGYTPGNA 339 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTC----------SCSSEEEECTTCH
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------ccc----------CcceEEEeCCCCH
Confidence 667789999999999999999999999999 99999999988 555 689999 999999
Q ss_pred HHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHH--HHHhhh
Q 008154 520 ESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQV--FEWASI 570 (576)
Q Consensus 520 ~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~--y~~~~~ 570 (576)
++++++|.+++. |++ . ..+++|+|+++++++.++ |+++..
T Consensus 340 ~~la~ai~~ll~----~~~----~---~~~~~~sw~~~a~~~~~~~~y~~~~~ 381 (406)
T 2hy7_A 340 DSVIAAITQALE----APR----V---RYRQCLNWSDTTDRVLDPRAYPETRL 381 (406)
T ss_dssp HHHHHHHHHHHH----CCC----C---CCSCCCBHHHHHHHHHCGGGSGGGBS
T ss_pred HHHHHHHHHHHh----Ccc----h---hhhhcCCHHHHHHHHHHhhcccccCc
Confidence 999999999986 443 1 235789999999999999 887653
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-27 Score=250.77 Aligned_cols=301 Identities=13% Similarity=0.082 Sum_probs=204.0
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcc-cccccccccccccC
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGA-LEWVFPTWARTHAL 281 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 281 (576)
.+||||+|++|..+++..+++.. +++|+++++|++ ||.. .++.+......+.. ....+..+
T Consensus 123 ~~DiV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~p-----fp~~~~~~~lp~~~~il~~ll~~d~i~f------ 185 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIP-----FPTPEIFNALPTYDTLLEQLCDYDLLGF------ 185 (482)
T ss_dssp TTCEEEEESGGGTTHHHHHHHTT------CCSCEEEECCSC-----CCCHHHHTTSTTHHHHHHHHTTSSEEEE------
T ss_pred CCCEEEEECchHHHHHHHHHHhC------CCCcEEEEEcCC-----CCCHHHHhhCccHHHHHHhhhccCeEEE------
Confidence 46999999999988888887654 679999999987 3322 22222211111110 00000000
Q ss_pred CcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcc
Q 008154 282 DTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 361 (576)
Q Consensus 282 ~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~ 361 (576)
......+..++.|+.++++|......+. ..+ ...++.+||||||.+.|.+.... .
T Consensus 186 ---~~~~~~~~f~~~~~~~l~~~~~~~~~~~----------~~g-~~~~v~vip~GID~~~f~~~~~~-----------~ 240 (482)
T 1uqt_A 186 ---QTENDRLAFLDCLSNLTRVTTRSAKSHT----------AWG-KAFRTEVYPIGIEPKEIAKQAAG-----------P 240 (482)
T ss_dssp ---SSHHHHHHHHHHHHHHSCEEEETTTEEE----------ETT-EEEEEEECCCCCCHHHHHHHHHS-----------C
T ss_pred ---ECHHHHHHHHHHHHHHhCCccccCCeEE----------ECC-eEEEEEEEeccCCHHHHHHHhcC-----------c
Confidence 0112344555667777776664422211 111 34578999999998766432100 0
Q ss_pred cchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCCC----hhhHHHHHHH
Q 008154 362 GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQFESWMRDT 431 (576)
Q Consensus 362 ~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g~----~~~~~~~~~~ 431 (576)
.... ...+++.++ +..+|+++||+++.||++.+++|++++.+ + +++|+++|.+. +.+++..+.+
T Consensus 241 ~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l 314 (482)
T 1uqt_A 241 LPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQL 314 (482)
T ss_dssp CCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHH
T ss_pred chHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHH
Confidence 0011 345666665 46799999999999999999999999865 2 47899999631 2233333333
Q ss_pred HH---Hhc--------CceEEEccC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCC-----ceEEeCccccccc
Q 008154 432 EA---TYK--------DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-----IPVVHATGGLRDT 494 (576)
Q Consensus 432 ~~---~~~--------~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~-----pvIat~~gg~~e~ 494 (576)
.+ ..+ ..++++.+. +.+.+..+|+.||++|+||..|+||++++||||||+ |+|+|+.+|..+.
T Consensus 315 ~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~ 394 (482)
T 1uqt_A 315 ENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE 394 (482)
T ss_dssp HHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT
T ss_pred HHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH
Confidence 22 211 135555443 667777999999999999999999999999999997 8999998887777
Q ss_pred cccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHHHHHh
Q 008154 495 VENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 495 i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~~~ 568 (576)
+ . +|++++|.|++++|++|.+++. .+++.+.++++++. .+.|||++++++|++.|+++
T Consensus 395 l-~------------~g~lv~p~d~~~lA~ai~~lL~---~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 395 L-T------------SALIVNPYDRDEVAAALDRALT---MSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp C-T------------TSEEECTTCHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred h-C------------CeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 6 2 6899999999999999999985 24566667776662 35799999999999999887
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-27 Score=242.73 Aligned_cols=339 Identities=12% Similarity=-0.017 Sum_probs=220.7
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEE
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 144 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (576)
+|||++++. + .||....+..++++|+++||+|+++++.... . .....
T Consensus 6 ~mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~--~-~~~~~------------------------ 52 (364)
T 1f0k_A 6 GKRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRM--E-ADLVP------------------------ 52 (364)
T ss_dssp -CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTST--H-HHHGG------------------------
T ss_pred CcEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcc--h-hhhcc------------------------
Confidence 489999972 2 5899999999999999999999999875321 0 00011
Q ss_pred eeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 145 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 145 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
..|++++.++.+.+.+.. .... + .....+........+.++.. +|||||+|.....+...+...
T Consensus 53 --~~g~~~~~~~~~~~~~~~-~~~~----~-~~~~~~~~~~~~l~~~l~~~--------~pDvv~~~~~~~~~~~~~~~~ 116 (364)
T 1f0k_A 53 --KHGIEIDFIRISGLRGKG-IKAL----I-AAPLRIFNAWRQARAIMKAY--------KPDVVLGMGGYVSGPGGLAAW 116 (364)
T ss_dssp --GGTCEEEECCCCCCTTCC-HHHH----H-TCHHHHHHHHHHHHHHHHHH--------CCSEEEECSSTTHHHHHHHHH
T ss_pred --ccCCceEEecCCccCcCc-cHHH----H-HHHHHHHHHHHHHHHHHHhc--------CCCEEEEeCCcCchHHHHHHH
Confidence 035666666533221100 0000 0 00111111122233333322 799999997554443333332
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
. .++|+|++.|+.. +. . ..+...+.+|.+++.|
T Consensus 117 -~------~~~p~v~~~~~~~-----~~-----------~------------------------~~~~~~~~~d~v~~~~ 149 (364)
T 1f0k_A 117 -S------LGIPVVLHEQNGI-----AG-----------L------------------------TNKWLAKIATKVMQAF 149 (364)
T ss_dssp -H------TTCCEEEEECSSS-----CC-----------H------------------------HHHHHTTTCSEEEESS
T ss_pred -H------cCCCEEEEecCCC-----Cc-----------H------------------------HHHHHHHhCCEEEecC
Confidence 2 4799999999641 10 0 1122335789988876
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC-
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP- 383 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 383 (576)
+.. ++ ++.+++||++...+.+.. .++.++++ ++..
T Consensus 150 ~~~----------------~~----~~~~i~n~v~~~~~~~~~----------------------~~~~~~~~--~~~~~ 185 (364)
T 1f0k_A 150 PGA----------------FP----NAEVVGNPVRTDVLALPL----------------------PQQRLAGR--EGPVR 185 (364)
T ss_dssp TTS----------------SS----SCEECCCCCCHHHHTSCC----------------------HHHHHTTC--CSSEE
T ss_pred hhh----------------cC----CceEeCCccchhhcccch----------------------hhhhcccC--CCCcE
Confidence 521 11 567999999866554321 12345554 3444
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcE-EEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQ-FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~-lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
++++.|++.+.|+.+.+++|++.+.+ +++ ++++|+++ .++..+.+.+....++. +.++.. ....+|+.||++|.
T Consensus 186 il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~--~~~l~~~~~~~~~~~v~-~~g~~~-~~~~~~~~ad~~v~ 260 (364)
T 1f0k_A 186 VLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS--QQSVEQAYAEAGQPQHK-VTEFID-DMAAAYAWADVVVC 260 (364)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC--HHHHHHHHHHTTCTTSE-EESCCS-CHHHHHHHCSEEEE
T ss_pred EEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch--HHHHHHHHhhcCCCceE-Eecchh-hHHHHHHhCCEEEE
Confidence 55667899999999999999999966 788 57789886 34444444332213443 455543 35579999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEeCccccc--------cccccccccccCCCCCcceeEeCCCC--HHHHHHHHHHHHHH
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVVHATGGLR--------DTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRT 532 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIat~~gg~~--------e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~la~~i~~~l~~ 532 (576)
||- |++++|||++|+|+|+++.+|.+ +++.+ ++|++++++| +++++++|.++
T Consensus 261 ~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-----------g~g~~~~~~d~~~~~la~~i~~l--- 322 (364)
T 1f0k_A 261 RSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-----------GAAKIIEQPQLSVDAVANTLAGW--- 322 (364)
T ss_dssp CCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-----------TSEEECCGGGCCHHHHHHHHHTC---
T ss_pred CCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-----------CcEEEeccccCCHHHHHHHHHhc---
Confidence 983 99999999999999999999864 34443 4699999887 88888887765
Q ss_pred hhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhh
Q 008154 533 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
|++.+.++++++ ..+.|+|++++++|.++|++..
T Consensus 323 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 323 ---SRETLLTMAERARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp ---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred ---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 678888888877 3468999999999999997643
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-26 Score=247.11 Aligned_cols=211 Identities=10% Similarity=0.049 Sum_probs=158.1
Q ss_pred hccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcC
Q 008154 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 375 (576)
Q Consensus 296 ~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 375 (576)
.+|.++++|+.... ...++.+|||++......+.... ...++.+|
T Consensus 328 ~~d~~i~~s~~~~~-----------------~~~~i~~ipn~~~~~~~~~~~~~------------------~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF-----------------YSEHVLRLQGAFQPSDTSRVVAE------------------PPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG-----------------CSSEEEECSSCSCCCCTTCCCCC------------------CCCTGGGT
T ss_pred EECCCcCCcccccC-----------------CcceeEcCCCcCCCCCCCCCCCC------------------CCCccccC
Confidence 47999999885331 12678999996553322111110 11245577
Q ss_pred CCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEe-CCChhhHHHHHHHHHH-hc-CceEEEccC-ChhH
Q 008154 376 LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLG-SGDPQFESWMRDTEAT-YK-DKYRGWVGF-NVPI 449 (576)
Q Consensus 376 i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G-~g~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~ 449 (576)
++ ++ .+++++||+.+ ||++.+++|+.++.+ ++++|+|+| +|+ ..+...+.+.+. .. .++. +.|+ +.+.
T Consensus 373 ~~--~~-~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~-~~~~l~~~~~~~~l~~~~v~-~~g~~~~~~ 446 (568)
T 2vsy_A 373 LP--EQ-GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE-ADARLRAFAHAQGVDAQRLV-FMPKLPHPQ 446 (568)
T ss_dssp CC--TT-SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT-HHHHHHHHHHHTTCCGGGEE-EECCCCHHH
T ss_pred CC--CC-CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH-HHHHHHHHHHHcCCChhHEE-eeCCCCHHH
Confidence 76 33 35669999999 999999999999854 689999999 664 334444444432 22 3455 4454 4456
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEE-------eCcc-------ccccccccccccccCCCCCcceeEeC
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV-------HATG-------GLRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIa-------t~~g-------g~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
...+|+.+|++|+||.+ ++|++++|||+||+|||+ |+.| |.+|++.+
T Consensus 447 ~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~------------------ 507 (568)
T 2vsy_A 447 YLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA------------------ 507 (568)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS------------------
T ss_pred HHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC------------------
Confidence 67899999999999999 999999999999999999 9999 88887642
Q ss_pred CCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---H--hhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 516 PLSEESMLTALRFAIRTYREHKSSWEGLMRRG---M--EKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 516 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~--~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
|+++++++|.+++. |++.+.++++++ + .+.|+|++++++|.++|++++...
T Consensus 508 --~~~~la~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 508 --DDAAFVAKAVALAS----DPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRH 563 (568)
T ss_dssp --SHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred --CHHHHHHHHHHHhc----CHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999998876 888888888776 2 367999999999999999988653
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=228.97 Aligned_cols=218 Identities=14% Similarity=0.035 Sum_probs=157.4
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
.+.+|.++++|+..++.+.. .+.+..++.+|+|| +|...+.+.... +..+++
T Consensus 148 ~~~~d~ii~~s~~~~~~~~~----------~g~~~~~i~vi~n~~~d~~~~~~~~~~-----------------~~~~~~ 200 (375)
T 3beo_A 148 GVMADLHFSPTAKSATNLQK----------ENKDESRIFITGNTAIDALKTTVKETY-----------------SHPVLE 200 (375)
T ss_dssp HHHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHCCSSC-----------------CCHHHH
T ss_pred hhhhheeeCCCHHHHHHHHH----------cCCCcccEEEECChhHhhhhhhhhhhh-----------------hHHHHH
Confidence 34699999999988776531 23445689999999 775544322100 012233
Q ss_pred HcCCCCCCCCCEEEEecccccc-cCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhc--CceEEEccCCh
Q 008154 373 ELGLPIRPDCPLIGFIGRLDYQ-KGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK--DKYRGWVGFNV 447 (576)
Q Consensus 373 ~~~i~~~~~~~~i~~~Gr~~~~-Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 447 (576)
.+ + ++.++++++||+.+. ||++.+++|++++.+ +++++++ |.++. ....+.+.+... .++.+......
T Consensus 201 ~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~--~~~~~~~~~~~~~~~~v~~~g~~~~ 273 (375)
T 3beo_A 201 KL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMN--PVVRETANDILGDYGRIHLIEPLDV 273 (375)
T ss_dssp TT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSC--HHHHHHHHHHHTTCTTEEEECCCCH
T ss_pred hc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCC--HHHHHHHHHHhhccCCEEEeCCCCH
Confidence 22 2 345678899999875 999999999999865 5788654 65532 223333333222 35544332334
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc-cccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
.....+|+.||++|.|| |.+++|||++|+|||+++. |+.+|++.+ | +|+++++ |+++++++|
T Consensus 274 ~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~----------g-~g~~v~~-d~~~la~~i 336 (375)
T 3beo_A 274 IDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEA----------G-TLKLAGT-DEETIFSLA 336 (375)
T ss_dssp HHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHT----------T-SEEECCS-CHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecC----------C-ceEEcCC-CHHHHHHHH
Confidence 45668999999999998 7889999999999999965 899999877 5 9999976 999999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 527 RFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
.+++. |++.+.+|++++ ..+.|+|+++++.+.+.++
T Consensus 337 ~~ll~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 337 DELLS----DKEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHH----CHHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHh----ChHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 99886 888888888766 3457999999999987653
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.3e-25 Score=226.94 Aligned_cols=234 Identities=11% Similarity=-0.016 Sum_probs=160.6
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCC-CCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
.+.+|.++++|+...+.+.. .+.+..++.+++||+ |...+.+.... .....+..+++
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~----------~g~~~~~i~vi~n~~~d~~~~~~~~~~------------~~~~~~~~~~~ 196 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLR----------ENVADSRIFITGNTVIDALLWVRDQVM------------SSDKLRSELAA 196 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHHHHTT------------TCHHHHHHHHT
T ss_pred HhhccEEEcCcHHHHHHHHH----------cCCChhhEEEeCChHHHHHHhhhhccc------------cchhhhHHHHH
Confidence 35699999999988766531 233456799999995 42111100000 00000124455
Q ss_pred HcC-CCCCCCCCEEEEecccccc-cCHHHHHHHHHhhhc--CCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 373 ELG-LPIRPDCPLIGFIGRLDYQ-KGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 373 ~~~-i~~~~~~~~i~~~Gr~~~~-Kg~~~ll~a~~~L~~--~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
.+| ++. ++..+++++||+.+. ||++.+++|+..+.+ ++++++++ |.+ +...+..+..... ..++.+......
T Consensus 197 ~~~~~~~-~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~-~~~~~~l~~~~~~-~~~v~~~g~~~~ 273 (384)
T 1vgv_A 197 NYPFIDP-DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLN-PNVREPVNRILGH-VKNVILIDPQEY 273 (384)
T ss_dssp TCTTCCT-TSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHHTT-CTTEEEECCCCH
T ss_pred hccccCC-CCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCC-HHHHHHHHHHhhc-CCCEEEeCCCCH
Confidence 666 641 234678899999876 999999999999865 57898886 443 2222322222111 235544321223
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc-cccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
+.+..+|+.||++|.|| |.+++|||++|+|||+++. |+..|++.+ | +|+++++ |+++++++|
T Consensus 274 ~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~----------g-~g~lv~~-d~~~la~~i 336 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA----------G-TVRLVGT-DKQRIVEEV 336 (384)
T ss_dssp HHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHH----------T-SEEEECS-SHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhC----------C-ceEEeCC-CHHHHHHHH
Confidence 45668999999999999 4458999999999999986 999999877 6 9999987 999999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 527 RFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
.+++. |++.+.+|++++ ....|+|+++++.+.+.|.+.++...
T Consensus 337 ~~ll~----d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 381 (384)
T 1vgv_A 337 TRLLK----DENEYQAMSRAHNPYGDGQACSRILEALKNNRISLGSHHH 381 (384)
T ss_dssp HHHHH----CHHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC-----
T ss_pred HHHHh----ChHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhccccc
Confidence 99886 888888888766 34679999999999999887776543
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.92 E-value=7.4e-24 Score=198.92 Aligned_cols=184 Identities=29% Similarity=0.499 Sum_probs=145.6
Q ss_pred EecCCCCCCCCC--CCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccc-cccCHHHHHHHHHhhh-
Q 008154 333 GITNGIDITEWN--PSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEIL- 408 (576)
Q Consensus 333 vi~nGvd~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~- 408 (576)
.||||||.+.|. +.... ....+..+++.++++ +..+|+|+||+. +.||++.+++|+..+.
T Consensus 1 gipngvd~~~f~~~~~~~~-------------~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~~ 64 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTGS-------------RDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSS 64 (200)
T ss_dssp ----CCCTTTSSGGGSCSC-------------HHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTT
T ss_pred CCCCccChhhccccccccc-------------hhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHHh
Confidence 379999999887 65420 011245678889987 345999999999 9999999999999995
Q ss_pred -c--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceE
Q 008154 409 -A--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPV 484 (576)
Q Consensus 409 -~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvI 484 (576)
+ ++++|+|+|.+++......+...+... ++.+..++ +.+.+..+++.||++|+||.+|++|++++|||++|+|||
T Consensus 65 ~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI 143 (200)
T 2bfw_A 65 KKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPI 143 (200)
T ss_dssp SGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEE
T ss_pred hccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEE
Confidence 4 589999999986434444444444444 66541444 556677899999999999999999999999999999999
Q ss_pred EeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 008154 485 VHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG 547 (576)
Q Consensus 485 at~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a 547 (576)
+++.|+..|.+ + +.+|++++++|+++++++|.+++. -|++.+.++++++
T Consensus 144 ~~~~~~~~e~~-~----------~~~g~~~~~~~~~~l~~~i~~l~~---~~~~~~~~~~~~a 192 (200)
T 2bfw_A 144 ASAVGGLRDII-T----------NETGILVKAGDPGELANAILKALE---LSRSDLSKFRENC 192 (200)
T ss_dssp EESCHHHHHHC-C----------TTTCEEECTTCHHHHHHHHHHHHH---CCHHHHHHHHHHH
T ss_pred EeCCCChHHHc-C----------CCceEEecCCCHHHHHHHHHHHHh---cCHHHHHHHHHHH
Confidence 99999999999 7 789999999999999999998873 1788888888877
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-23 Score=218.88 Aligned_cols=287 Identities=16% Similarity=0.134 Sum_probs=198.1
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcccccccccccccccCCc
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
-|+|.+||.|..++|.+++++. +++++.|.+|.+ ||.. .++.+. ..+
T Consensus 150 ~D~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiP-----fPs~e~f~~Lp--~~~------------------- 197 (496)
T 3t5t_A 150 DPVYLVHDYQLVGVPALLREQR------PDAPILLFVHIP-----WPSADYWRILP--KEI------------------- 197 (496)
T ss_dssp SCEEEEESGGGTTHHHHHHHHC------TTSCEEEECCSC-----CCCHHHHTTSC--HHH-------------------
T ss_pred CCEEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCC-----CCCHHHHhhCc--HhH-------------------
Confidence 4899999999999999999876 789999999998 4433 223222 100
Q ss_pred CccchhHHHHHHhccceeccCccchhhhccccCCcchhhhh--------------hccCCceeEecCCCCCCCCCCCCCc
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEIL--------------SSRKSVLNGITNGIDITEWNPSSDE 349 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~--------------~~~~~~i~vi~nGvd~~~~~~~~~~ 349 (576)
..-...++..||.|.+-+..+.+.+.+. ....+ .....++.++|+|||+..|.+....
T Consensus 198 ---r~ell~gll~~DligF~t~~y~~~Fl~~-----~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~ 269 (496)
T 3t5t_A 198 ---RTGILHGMLPATTIGFFADRWCRNFLES-----VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ 269 (496)
T ss_dssp ---HHHHHHHHTTSSEEEESSHHHHHHHHHH-----HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC
T ss_pred ---HHHHHHHHHhCCEEEEecHHHHHHHHHH-----HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH
Confidence 0112234456677766666555432110 00111 1123468999999999888764321
Q ss_pred cccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C---CcEEEEEeCC----
Q 008154 350 HIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D---DIQFVMLGSG---- 420 (576)
Q Consensus 350 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~---~~~lii~G~g---- 420 (576)
+ ...+++.++ +..+|+++||+++.||++.+|+|+ ++.+ + ++.|+++|..
T Consensus 270 ----------~------~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~ 327 (496)
T 3t5t_A 270 ----------L------PEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLY 327 (496)
T ss_dssp ----------C------CTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTT
T ss_pred ----------H------HHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCC
Confidence 0 133455554 468999999999999999999999 7754 3 3678888742
Q ss_pred ChhhHHHHHHHHH---HhcC-----ceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcC---CceEEeCcc
Q 008154 421 DPQFESWMRDTEA---TYKD-----KYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYG---TIPVVHATG 489 (576)
Q Consensus 421 ~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G---~pvIat~~g 489 (576)
.+.+.+..+.+.+ ..+. .+.+....+.+....+|+.||++++||.+|+||++++|||||| .|+|.|..+
T Consensus 328 ~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a 407 (496)
T 3t5t_A 328 VPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETC 407 (496)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB
T ss_pred chHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCC
Confidence 1334444443332 2211 3444433466667799999999999999999999999999996 899999999
Q ss_pred ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 490 GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 490 g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
|..+.+. .+|++++|.|++++|++|.+++.. .++++++++++. ....+++...++.+++.+..
T Consensus 408 Ga~~~l~------------~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 408 GAAEVLG------------EYCRSVNPFDLVEQAEAISAALAA---GPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp TTHHHHG------------GGSEEECTTBHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHH
T ss_pred CCHHHhC------------CCEEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh
Confidence 8888874 479999999999999999999873 445555555555 34679999999999888876
Q ss_pred h
Q 008154 568 A 568 (576)
Q Consensus 568 ~ 568 (576)
+
T Consensus 473 ~ 473 (496)
T 3t5t_A 473 D 473 (496)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.8e-23 Score=185.29 Aligned_cols=159 Identities=19% Similarity=0.222 Sum_probs=124.6
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCE
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDI 459 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv 459 (576)
+++|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+. .+...+ ..+....++. + ++ +.+.+..+|+.||+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~-~~~~~~-~~~~~~~~v~-~-g~~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPD-EKKIKL-LAQKLGVKAE-F-GFVNSNELLEILKTCTL 77 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCSTT-HHHHHH-HHHHHTCEEE-C-CCCCHHHHHHHHTTCSE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCcc-HHHHHH-HHHHcCCeEE-E-eecCHHHHHHHHHhCCE
Confidence 4789999999999999999999999865 5899999999852 333333 3334433443 3 44 55667789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCC-ceEE-eCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCH
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGT-IPVV-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHK 537 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~-pvIa-t~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~ 537 (576)
+|+||.+|++|++++|||++|+ |||+ ++.|+..+++.+ + +.+++++|+++++++|.+++. |+
T Consensus 78 ~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~----------~--~~~~~~~~~~~l~~~i~~l~~----~~ 141 (166)
T 3qhp_A 78 YVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALD----------E--RSLFEPNNAKDLSAKIDWWLE----NK 141 (166)
T ss_dssp EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSS----------G--GGEECTTCHHHHHHHHHHHHH----CH
T ss_pred EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccC----------C--ceEEcCCCHHHHHHHHHHHHh----CH
Confidence 9999999999999999999998 9999 568888898876 3 337788999999999999986 88
Q ss_pred HHHHHHHHHH--HhhhCCHHHHHHH
Q 008154 538 SSWEGLMRRG--MEKDYTWENAAIQ 560 (576)
Q Consensus 538 ~~~~~~~~~a--~~~~fs~~~~~~~ 560 (576)
+.+.++++++ ..++|||++++++
T Consensus 142 ~~~~~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 142 LERERMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHCChhhhhcC
Confidence 8888888887 3578999998764
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-20 Score=193.80 Aligned_cols=219 Identities=11% Similarity=-0.007 Sum_probs=147.8
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCC-CCCCCCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
..+.+|.++++|+..++.+.. .+.+..++.+++|++ |...+.+. +..++
T Consensus 143 ~~~~~~~~~~~s~~~~~~l~~----------~g~~~~ki~vi~n~~~d~~~~~~~--------------------~~~~~ 192 (376)
T 1v4v_A 143 TDVLTDLDFAPTPLAKANLLK----------EGKREEGILVTGQTGVDAVLLAAK--------------------LGRLP 192 (376)
T ss_dssp HHHHCSEEEESSHHHHHHHHT----------TTCCGGGEEECCCHHHHHHHHHHH--------------------HCCCC
T ss_pred HHHHhceeeCCCHHHHHHHHH----------cCCCcceEEEECCchHHHHhhhhh--------------------hhHHH
Confidence 446789999999987766532 133456789999975 32111000 00000
Q ss_pred HHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCChh
Q 008154 372 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVP 448 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (576)
+.+ + ++..+++++||+...||++.+++|++.+.+ ++++++++ |+++ ...+..+..... ..++.+.......
T Consensus 193 ~~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 193 EGL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFVLLDPLEYG 266 (376)
T ss_dssp TTC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEEEECCCCHH
T ss_pred Hhc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEEEECCCCHH
Confidence 111 1 245677889999888899999999999865 57888886 7653 222222222211 2355443222223
Q ss_pred HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHH
Q 008154 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 527 (576)
Q Consensus 449 ~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~ 527 (576)
....+|+.||++|.|| | |+ ++|||++|+|+|++ +.|+..+.+.+ ++|++++ .|+++++++|.
T Consensus 267 ~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~-----------g~g~lv~-~d~~~la~~i~ 329 (376)
T 1v4v_A 267 SMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKA-----------GILKLAG-TDPEGVYRVVK 329 (376)
T ss_dssp HHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHH-----------TSEEECC-SCHHHHHHHHH
T ss_pred HHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcC-----------CceEECC-CCHHHHHHHHH
Confidence 4568999999999998 2 44 88999999999997 57888887765 5899885 49999999999
Q ss_pred HHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 528 FAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 528 ~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+++. |++.+.+|+++ .+.|.+...++++.+.+.+.+.
T Consensus 330 ~ll~----d~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 330 GLLE----NPEELSRMRKA--KNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp HHHT----CHHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTT
T ss_pred HHHh----ChHhhhhhccc--CCCCCCChHHHHHHHHHHHHhc
Confidence 8875 88888888763 3566666777777777776665
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-20 Score=170.91 Aligned_cols=138 Identities=19% Similarity=0.185 Sum_probs=117.3
Q ss_pred CCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHH---HHhcCceEEEccCChhHHHHHHhc
Q 008154 380 PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTE---ATYKDKYRGWVGFNVPISHRITAG 456 (576)
Q Consensus 380 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~ 456 (576)
.+..+|+|+||+.+.||++.+++|+..+ ++++|+|+|.++.. +...+.+. ..+..++.+....+.+.+..+++.
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~-~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKG-DHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTT-STHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccH-HHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 5678999999999999999999999998 68999999998632 23333333 234456665544466667799999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
||++|+||..|++|++++|||++|+|||+++.|+..|.+.+ +.+|+++ +.|+++++++|.+++.
T Consensus 98 adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~----------~~~g~~~-~~d~~~l~~~i~~l~~ 161 (177)
T 2f9f_A 98 CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVIN----------EKTGYLV-NADVNEIIDAMKKVSK 161 (177)
T ss_dssp CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCB----------TTTEEEE-CSCHHHHHHHHHHHHH
T ss_pred CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcC----------CCccEEe-CCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999988 8899999 8899999999999986
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-19 Score=184.96 Aligned_cols=197 Identities=13% Similarity=0.034 Sum_probs=140.6
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
+.+..++.+|.++++|+..++.+.. ++.+ ++.+++|+. |.+....
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~----------~g~~--ki~vi~n~~----f~~~~~~------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT----------FGAK--RVFSCGNLK----FICQKGK------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT----------TTCC--SEEECCCGG----GCCCCCS-------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH----------cCCC--eEEEcCCCc----cCCCcCh-------------------
Confidence 3455678899999999998877642 1222 789999983 2111100
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCc--------
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDK-------- 438 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~-------- 438 (576)
...+ ..+++++.|+ ..||.+.+++|++++.+ ++++|+|+|+++...++..+.+.+ ....
T Consensus 191 ----~~~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~~~~~l~~~~~~-~gl~~~~~~~~~ 259 (374)
T 2xci_A 191 ----GIKL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARD-FGFKTSFFENLE 259 (374)
T ss_dssp ----CCCC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGGGHHHHHHHHHH-TTCCEEETTCCC
T ss_pred ----hhhh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHHHHHHHHHHHHH-CCCceEEecCCC
Confidence 0001 1256666665 46899999999999975 589999999985332345444443 2211
Q ss_pred -eEEEccCChhHHHHHHhcCCEEEeCCCC-CCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCC-cceeEe
Q 008154 439 -YRGWVGFNVPISHRITAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGE-GTGWSF 514 (576)
Q Consensus 439 -~~~~~~~~~~~~~~ll~~~Dv~v~ps~~-E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~-~~G~~~ 514 (576)
.+.+.++..+ +..+|+.||+++.||.+ |.+|.+++||||||+|||++ +.++++|.+.+ . .+|+++
T Consensus 260 ~~v~~~~~~~d-l~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~----------~~~~G~l~ 328 (374)
T 2xci_A 260 GDVILVDRFGI-LKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEF----------LEKEGAGF 328 (374)
T ss_dssp SSEEECCSSSC-HHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHH----------HHHTTCEE
T ss_pred CcEEEECCHHH-HHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHH----------HHHCCCEE
Confidence 1334454344 45899999998888765 67899999999999999985 77999998865 2 578888
Q ss_pred CCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 008154 515 LPLSEESMLTALRFAIRTYREHKSSWEGLMRRG 547 (576)
Q Consensus 515 ~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a 547 (576)
.++|+++++++|.+++. | +.+.+|++++
T Consensus 329 ~~~d~~~La~ai~~ll~----d-~~r~~mg~~a 356 (374)
T 2xci_A 329 EVKNETELVTKLTELLS----V-KKEIKVEEKS 356 (374)
T ss_dssp ECCSHHHHHHHHHHHHH----S-CCCCCHHHHH
T ss_pred EeCCHHHHHHHHHHHHh----H-HHHHHHHHHH
Confidence 88999999999999986 6 6677777766
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-16 Score=165.25 Aligned_cols=160 Identities=13% Similarity=0.084 Sum_probs=119.4
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
+..++++.|++. .|+.+.+.++++.+.+.++++++++.+.+..+.. + ....++. +.++. + ...+++.||++
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l-~----~~~~~v~-~~~~~-~-~~~~l~~ad~~ 312 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGL-G----EVPANVR-LESWV-P-QAALLPHVDLV 312 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTC-C----CCCTTEE-EESCC-C-HHHHGGGCSEE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhh-c----cCCCcEE-EeCCC-C-HHHHHhcCcEE
Confidence 456778889986 7888888888888877678888877654211111 0 1233544 44554 2 44799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHhh
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTYR 534 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~~ 534 (576)
|.++ .+.+++|||++|+|+|++..+ +..+.+.+ +++|+.++++ |+++++++|.+++.
T Consensus 313 v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~----------~g~g~~~~~~~~~~~~l~~ai~~ll~--- 375 (412)
T 3otg_A 313 VHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQ----------AGAGDHLLPDNISPDSVSGAAKRLLA--- 375 (412)
T ss_dssp EESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------HTSEEECCGGGCCHHHHHHHHHHHHH---
T ss_pred EECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHH----------cCCEEecCcccCCHHHHHHHHHHHHh---
Confidence 9775 348999999999999997654 36677766 6889999876 89999999999886
Q ss_pred hCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 535 EHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 535 ~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
|++.+.++++.+ +...++++++++.+.+++.+
T Consensus 376 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 376 -EESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred -CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 788888887766 55678999999999888754
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-15 Score=152.82 Aligned_cols=244 Identities=11% Similarity=-0.007 Sum_probs=157.9
Q ss_pred CccEEEeCCCcc--c-hHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhccccccccccccccc
Q 008154 204 EKCIFLVNDWHA--G-LVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHA 280 (576)
Q Consensus 204 ~pDVvH~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (576)
++|+|+++.... . +...++..... .++|+|+.+|+.. |. .. ...
T Consensus 74 ~~DvIi~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~-----pl-~~-----~~~----------------- 120 (339)
T 3rhz_A 74 HGDVVIFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVV-----PL-MF-----SGN----------------- 120 (339)
T ss_dssp TTCEEEEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCH-----HH-HC-----GGG-----------------
T ss_pred CCCEEEEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccH-----Hh-hC-----ccc-----------------
Confidence 689999876432 2 22233333211 3799999999862 11 10 000
Q ss_pred CCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCc
Q 008154 281 LDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 360 (576)
Q Consensus 281 ~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~ 360 (576)
......++..++.||.|+++|+.+.+.+.+ .+.+..++.++++. +... +.+.
T Consensus 121 ---~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~----------~G~~~~ki~~~~~~-~~~~--~~~~------------ 172 (339)
T 3rhz_A 121 ---FYLMDRTIAYYNKADVVVAPSQKMIDKLRD----------FGMNVSKTVVQGMW-DHPT--QAPM------------ 172 (339)
T ss_dssp ---GGGHHHHHHHHTTCSEEEESCHHHHHHHHH----------TTCCCSEEEECCSC-CCCC--CCCC------------
T ss_pred ---hhhHHHHHHHHHHCCEEEECCHHHHHHHHH----------cCCCcCceeecCCC-CccC--cccc------------
Confidence 001236788899999999999999877642 13333555443332 2110 0000
Q ss_pred ccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceE
Q 008154 361 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYR 440 (576)
Q Consensus 361 ~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~ 440 (576)
..+ .+.++|+|+|++.+...+ ..+ .++++|+|+|+|+.. ... ++.
T Consensus 173 --------------~~~--~~~~~i~yaG~l~k~~~L-------~~l-~~~~~f~ivG~G~~~----------~l~-nV~ 217 (339)
T 3rhz_A 173 --------------FPA--GLKREIHFPGNPERFSFV-------KEW-KYDIPLKVYTWQNVE----------LPQ-NVH 217 (339)
T ss_dssp --------------CCC--EEEEEEEECSCTTTCGGG-------GGC-CCSSCEEEEESCCCC----------CCT-TEE
T ss_pred --------------ccc--CCCcEEEEeCCcchhhHH-------HhC-CCCCeEEEEeCCccc----------CcC-CEE
Confidence 011 245789999999953222 222 368999999999642 133 665
Q ss_pred EEccCChhHHHHHHhcCCEEEeCCC-------CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeE
Q 008154 441 GWVGFNVPISHRITAGCDILLMPSR-------FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS 513 (576)
Q Consensus 441 ~~~~~~~~~~~~ll~~~Dv~v~ps~-------~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~ 513 (576)
+....+.+.+..+++.+|+.+.+.. ...+|.++.||||+|+|||+++.++..+++.+ +.+|+.
T Consensus 218 f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~----------~~~G~~ 287 (339)
T 3rhz_A 218 KINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIEN----------NGLGWI 287 (339)
T ss_dssp EEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHH----------HTCEEE
T ss_pred EeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHh----------CCeEEE
Confidence 5544577778789988888887621 12568999999999999999999999999998 889999
Q ss_pred eCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHH
Q 008154 514 FLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQY 561 (576)
Q Consensus 514 ~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y 561 (576)
++ +.++++++|..+ .++.+.+|++++ .+++++++.+.++.
T Consensus 288 ~~--~~~e~~~~i~~l------~~~~~~~m~~na~~~a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 288 VK--DVEEAIMKVKNV------NEDEYIELVKNVRSFNPILRKGFFTRRL 329 (339)
T ss_dssp ES--SHHHHHHHHHHC------CHHHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred eC--CHHHHHHHHHHh------CHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 86 577777777754 456678888887 34455555555444
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.4e-16 Score=160.27 Aligned_cols=218 Identities=14% Similarity=0.064 Sum_probs=141.5
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
+.+|.+++.|+..++.+.+ .+.+++++.++.|. +|...+.+.... +...++.
T Consensus 168 ~~a~~~~~~se~~~~~l~~----------~Gi~~~~i~vvGn~~~D~~~~~~~~~~-----------------~~~~~~~ 220 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLA----------EGKDPATIFVTGNTAIDALKTTVQKDY-----------------HHPILEN 220 (403)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHSCTTC-----------------CCHHHHS
T ss_pred HhcCEEECCCHHHHHHHHH----------cCCCcccEEEeCCchHHHHHhhhhhhc-----------------chHHHHh
Confidence 5689999999987766532 24456789999984 553222111100 0112222
Q ss_pred cCCCCCCCCCEEEEeccccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHH
Q 008154 374 LGLPIRPDCPLIGFIGRLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 450 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (576)
+ + ++..++++.+|.+. .|+++.+++|+.++.+ +++++++.+...+...+..+... ....++.+.........
T Consensus 221 l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~-~~~~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 221 L--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAIL-GGHERIHLIEPLDAIDF 295 (403)
T ss_dssp C--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHH-TTCTTEEEECCCCHHHH
T ss_pred c--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHh-CCCCCEEEeCCCCHHHH
Confidence 3 2 34566777888653 4789999999999865 68898887432232233222211 11235544443343456
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
..+++.||++|.+| |...+||+++|+|+|++ +.++..|.+.. ++|+++++ |++++++++.++
T Consensus 296 ~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~-----------g~~~lv~~-d~~~l~~ai~~l 358 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEA-----------GTLKLIGT-NKENLIKEALDL 358 (403)
T ss_dssp HHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHH-----------TSEEECCS-CHHHHHHHHHHH
T ss_pred HHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeC-----------CcEEEcCC-CHHHHHHHHHHH
Confidence 68999999999887 44559999999999998 67888888765 48888865 899999999988
Q ss_pred HHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 530 IRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 530 l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
+. |++.+.+|++++ +....+++++++.+.+.+
T Consensus 359 l~----~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 359 LD----NKESHDKMAQAANPYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp HH----CHHHHHHHHHSCCTTCCSCHHHHHHHHHHHHH
T ss_pred Hc----CHHHHHHHHhhcCcccCCcHHHHHHHHHHHHh
Confidence 75 888888887643 223445555555555443
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.68 E-value=8.8e-16 Score=159.46 Aligned_cols=222 Identities=11% Similarity=0.017 Sum_probs=141.1
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
.+.+|.+++.|+..++.+.+ .+.++.++.++.|. +|...+.+.... .....+..+++
T Consensus 164 ~~~a~~~~~~se~~~~~l~~----------~G~~~~ki~vvGn~~~d~~~~~~~~~~------------~~~~~~~~~r~ 221 (396)
T 3dzc_A 164 AALTQYHFAPTDTSRANLLQ----------ENYNAENIFVTGNTVIDALLAVREKIH------------TDMDLQATLES 221 (396)
T ss_dssp HHTCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHHHHHH------------HCHHHHHHHHH
T ss_pred HHhcCEEECCCHHHHHHHHH----------cCCCcCcEEEECCcHHHHHHHhhhhcc------------cchhhHHHHHH
Confidence 46789999999987766531 24456789999985 442111100000 00000256677
Q ss_pred HcC-CCCCCCCCEEEEecccc-cccCHHHHHHHHHhhhc--CCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 373 ELG-LPIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 373 ~~~-i~~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~--~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
.+| ++. ++..++++.+|.+ ..|+++.+++|++.+.+ +++++++. |.+ +...+..+... ....++.+......
T Consensus 222 ~lg~l~~-~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~-~~~~~v~~~~~lg~ 298 (396)
T 3dzc_A 222 QFPMLDA-SKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLL-KGVSNIVLIEPQQY 298 (396)
T ss_dssp TCTTCCT-TSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHT-TTCTTEEEECCCCH
T ss_pred HhCccCC-CCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHH-cCCCCEEEeCCCCH
Confidence 788 442 2344556666754 45889999999999875 68998885 554 33333222221 11235544433332
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
.....+|+.||++|.+| + |++ +|||++|+|+|++ +.++.+|.+.. | ++++++. |++++++++
T Consensus 299 ~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~PvV~~~~~~~~~e~v~~----------G-~~~lv~~-d~~~l~~ai 361 (396)
T 3dzc_A 299 LPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGKPVLVMRETTERPEAVAA----------G-TVKLVGT-NQQQICDAL 361 (396)
T ss_dssp HHHHHHHHHCSEEEESC---S-GGG-TTGGGGTCCEEECCSSCSCHHHHHH----------T-SEEECTT-CHHHHHHHH
T ss_pred HHHHHHHHhcCEEEECC---c-cHH-HHHHHcCCCEEEccCCCcchHHHHc----------C-ceEEcCC-CHHHHHHHH
Confidence 33558999999999998 3 444 8999999999998 78888888876 4 5677654 899999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHH
Q 008154 527 RFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQ 563 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~ 563 (576)
.+++. |++.+.+|++++ ..|.....+++..+
T Consensus 362 ~~ll~----d~~~~~~m~~~~--~~~~~~~aa~ri~~ 392 (396)
T 3dzc_A 362 SLLLT----DPQAYQAMSQAH--NPYGDGKACQRIAD 392 (396)
T ss_dssp HHHHH----CHHHHHHHHTSC--CTTCCSCHHHHHHH
T ss_pred HHHHc----CHHHHHHHhhcc--CCCcCChHHHHHHH
Confidence 88875 888888887653 33444444444443
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.63 E-value=4.8e-14 Score=148.15 Aligned_cols=160 Identities=10% Similarity=0.018 Sum_probs=110.3
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhc-CCcEE-EEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQF-VMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~l-ii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
+..++++.|++. .++.+.+.++++.+.+ +++++ +++|+++.. +.. +....++. +.++.+.. .+|+.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~-~~l-----~~~~~~v~-~~~~~~~~--~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP-AEL-----GELPDNVE-VHDWVPQL--AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CG-GGG-----CSCCTTEE-EESSCCHH--HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh-HHh-----ccCCCCeE-EEecCCHH--HHhhccC
Confidence 456788999998 6666666666666655 47888 467877421 111 11234554 45554443 6899999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRT 532 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~ 532 (576)
++|..+ -+.+++|||++|+|+|++..++ +.+.+.+ .++|+.++++ |+++++++|.+++.
T Consensus 302 ~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~~i~~ll~- 366 (430)
T 2iyf_A 302 LFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQG----------LGVARKLATEEATADLLRETALALVD- 366 (430)
T ss_dssp EEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------TTSEEECCCC-CCHHHHHHHHHHHHH-
T ss_pred EEEECC----CccHHHHHHHhCCCEEECCCccchHHHHHHHHH----------cCCEEEcCCCCCCHHHHHHHHHHHHc-
Confidence 999864 2378999999999999997654 3555655 5789998876 78999999999885
Q ss_pred hhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHh
Q 008154 533 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~ 568 (576)
|++.+.++++.+ +....+++++++.+.+.+.+.
T Consensus 367 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 401 (430)
T 2iyf_A 367 ---DPEVARRLRRIQAEMAQEGGTRRAADLIEAELPAR 401 (430)
T ss_dssp ---CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC-
T ss_pred ---CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhcc
Confidence 777777776655 445689999999888877544
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-12 Score=134.86 Aligned_cols=161 Identities=12% Similarity=0.004 Sum_probs=106.1
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhc-CCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
.++++.|+....+.-+.+.++++.+.. .++++++ +|.++ .+...+... ....++. ..+|.++ +..+|+.||++
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~~~~~~~~-~~~~~~~-v~~f~~d-m~~~l~~aDlv 256 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AEITAERYR-TVAVEAD-VAPFISD-MAAAYAWADLV 256 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HHHHHHHHH-HTTCCCE-EESCCSC-HHHHHHHCSEE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cccccceec-ccccccc-cccchhh-hhhhhccceEE
Confidence 455666788888888889999988865 3555554 44443 344444443 3333433 3456444 44799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCccccc--------cccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR--------DTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAI 530 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~--------e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l 530 (576)
|.-+ -++|+.|+|++|+|+|....+... +.+.+ .+.|++++.. +++.++++|.+++
T Consensus 257 I~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~----------~G~a~~l~~~~~~~~~L~~~i~~ll 322 (365)
T 3s2u_A 257 ICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR----------SGAGRLLPQKSTGAAELAAQLSEVL 322 (365)
T ss_dssp EECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT----------TTSEEECCTTTCCHHHHHHHHHHHH
T ss_pred EecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH----------CCCEEEeecCCCCHHHHHHHHHHHH
Confidence 9643 478999999999999987654321 23444 4678888654 5888999999887
Q ss_pred HHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~ 566 (576)
. |++.+.+|++++. ......+++++..+++.+
T Consensus 323 ~----d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 323 M----HPETLRSMADQARSLAKPEATRTVVDACLEVAR 356 (365)
T ss_dssp H----CTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC-
T ss_pred C----CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 6 8899999988873 334556666666665543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=7.3e-15 Score=152.82 Aligned_cols=152 Identities=15% Similarity=0.024 Sum_probs=97.5
Q ss_pred CCCEEEEeccccccc----------CHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHH
Q 008154 381 DCPLIGFIGRLDYQK----------GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 450 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~K----------g~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (576)
...++++.|++...| .+..+++++..+ ++++++++.+.. .+ .+. ....++. +.++.+ .
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~---~l~-~~~~~v~-~~~~~~--~ 294 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQ---TLQ-PLPEGVL-AAGQFP--L 294 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEE-EESCCC--H
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hh---hhc-cCCCcEE-EeCcCC--H
Confidence 456778889997544 466666666655 789999887742 11 111 2344554 445542 3
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeC----ccccccccccccccccCCCCCcceeEeCCC--CHHHHHH
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLT 524 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~----~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~ 524 (576)
..++..||++|.. +-+.+++|||++|+|+|+.. ..++.+.+.+ .++|+.++++ +++++++
T Consensus 295 ~~ll~~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~ 360 (398)
T 4fzr_A 295 SAIMPACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHA----------AGAGVEVPWEQAGVESVLA 360 (398)
T ss_dssp HHHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH----------TTSEEECC-------CHHH
T ss_pred HHHHhhCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHH----------cCCEEecCcccCCHHHHHH
Confidence 4689999999953 45789999999999999954 4466677766 6889998776 6788888
Q ss_pred HHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHH
Q 008154 525 ALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYE 562 (576)
Q Consensus 525 ~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~ 562 (576)
+|.+++. |++.+.++++.+ +....+++++++.+.
T Consensus 361 ai~~ll~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 361 ACARIRD----DSSYVGNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp HHHHHHH----CTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred HHHHHHh----CHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 8888876 777777777765 567889999888764
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.6e-12 Score=133.40 Aligned_cols=159 Identities=15% Similarity=0.010 Sum_probs=106.2
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|+....+ .+.+.+.++.+.+.++++++ +|++.. .+. +. ....++. +.++.+.. .+++.||+
T Consensus 231 ~~~v~v~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~----~~-~~~~~v~-~~~~~~~~--~ll~~ad~ 300 (402)
T 3ia7_A 231 APVLLVSLGNQFNEH-PEFFRACAQAFADTPWHVVMAIGGFLD-PAV----LG-PLPPNVE-AHQWIPFH--SVLAHARA 300 (402)
T ss_dssp CCEEEEECCSCSSCC-HHHHHHHHHHHTTSSCEEEEECCTTSC-GGG----GC-SCCTTEE-EESCCCHH--HHHTTEEE
T ss_pred CCEEEEECCCCCcch-HHHHHHHHHHHhcCCcEEEEEeCCcCC-hhh----hC-CCCCcEE-EecCCCHH--HHHhhCCE
Confidence 456778889887655 23333334444333577666 565421 111 11 1234554 45564443 79999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCc-----cccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHH
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHAT-----GGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRT 532 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~-----gg~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~ 532 (576)
+|..+ -..|++|||++|+|+|+... .++.+.+.+ .+.|..++++ +++++++++.+++.
T Consensus 301 ~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~~~~~ll~- 365 (402)
T 3ia7_A 301 CLTHG----TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE----------LGLGSVLRPDQLEPASIREAVERLAA- 365 (402)
T ss_dssp EEECC----CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH----------TTSEEECCGGGCSHHHHHHHHHHHHH-
T ss_pred EEECC----CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH----------cCCEEEccCCCCCHHHHHHHHHHHHc-
Confidence 99764 23788999999999996544 355566665 6788888765 78999999998876
Q ss_pred hhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 533 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
|++.+.++.+.+ +....+++++++.+.+++..
T Consensus 366 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 366 ---DSAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp ---CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 777777766654 45678899999988887764
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-12 Score=135.69 Aligned_cols=154 Identities=16% Similarity=0.110 Sum_probs=107.4
Q ss_pred CCCEEEEecccccc-cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQ-KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~-Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|++... ++.+.+.++++.+.+.++++++++.+.. .+. +. ....++. +.++. + ...++..||+
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~-~~~----l~-~~~~~v~-~~~~~-~-~~~ll~~ad~ 302 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD-ISP----LG-TLPRNVR-AVGWT-P-LHTLLRTCTA 302 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC-CGG----GC-SCCTTEE-EESSC-C-HHHHHTTCSE
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC-hhh----hc-cCCCcEE-EEccC-C-HHHHHhhCCE
Confidence 45678888999754 4666666666666556899999988752 111 11 2234554 44554 2 3368999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEE----eCccccc--cccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHH
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVV----HATGGLR--DTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIR 531 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIa----t~~gg~~--e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~ 531 (576)
+|.. +-+.|++|||++|+|+|+ .+..++. +.+.+ .+.|+.++++ +++.++ +++.
T Consensus 303 ~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~----------~g~g~~~~~~~~~~~~l~----~ll~ 364 (398)
T 3oti_A 303 VVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR----------RGIGLVSTSDKVDADLLR----RLIG 364 (398)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH----------HTSEEECCGGGCCHHHHH----HHHH
T ss_pred EEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH----------CCCEEeeCCCCCCHHHHH----HHHc
Confidence 9954 455799999999999999 4556777 77776 6889998765 455444 5543
Q ss_pred HhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 532 TYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
|++.++++.+.+ +....+++++++.+.++.
T Consensus 365 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 365 ----DESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp ----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 788777777665 567889999998887654
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2e-11 Score=127.43 Aligned_cols=159 Identities=12% Similarity=0.040 Sum_probs=103.1
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|+...... +.+...++.+.+.++++++ +|++.. .+.. + ....++. +.++.+.. .+++.||+
T Consensus 247 ~~~v~v~~Gs~~~~~~-~~~~~~~~al~~~~~~~v~~~g~~~~-~~~l-~----~~~~~v~-~~~~~~~~--~ll~~ad~ 316 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRP-GFFRDCARAFDGQPWHVVMTLGGQVD-PAAL-G----DLPPNVE-AHRWVPHV--KVLEQATV 316 (415)
T ss_dssp CCEEEEECTTTSCCCH-HHHHHHHHHHTTSSCEEEEECTTTSC-GGGG-C----CCCTTEE-EESCCCHH--HHHHHEEE
T ss_pred CCEEEEECCCCCCChH-HHHHHHHHHHhcCCcEEEEEeCCCCC-hHHh-c----CCCCcEE-EEecCCHH--HHHhhCCE
Confidence 4567788898764432 3333333334333588877 565521 1111 1 1234554 34554433 68999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeC----ccccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHh
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTY 533 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~----~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~ 533 (576)
+|..+ -..|++|||++|+|+|+.. ...+.+.+.+ .+.|..+..+ +++++++++.+++.
T Consensus 317 ~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~ll~-- 380 (415)
T 3rsc_A 317 CVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ----------LGLGAVLPGEKADGDTLLAAVGAVAA-- 380 (415)
T ss_dssp EEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH----------HTCEEECCGGGCCHHHHHHHHHHHHT--
T ss_pred EEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH----------cCCEEEcccCCCCHHHHHHHHHHHHc--
Confidence 99764 2368899999999999953 3345555555 5778888765 78888888888875
Q ss_pred hhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 534 ~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
|++.+.++.+.+ +....+++++++.+.+++.+
T Consensus 381 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 381 --DPALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp --CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 777777766654 45678888888888777654
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=8.2e-13 Score=136.83 Aligned_cols=158 Identities=9% Similarity=0.029 Sum_probs=107.2
Q ss_pred CCCEEEEecccccccCH-HHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRLDYQKGI-DLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~-~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
+..++++.|+....|+. ..+++++....+ ++++++++|.+.. .+. +. ....++. +.++.+. ..+++.||
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~-~~~----l~-~~~~~v~-~~~~~~~--~~ll~~ad 288 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH-RAL----LT-DLPDNAR-IAESVPL--NLFLRTCE 288 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG-GGG----CT-TCCTTEE-ECCSCCG--GGTGGGCS
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc-hhh----cc-cCCCCEE-EeccCCH--HHHHhhCC
Confidence 44667778998764433 555555544433 4899999987642 111 11 2233443 3455332 24779999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeC----ccccccccccccccccCCCCCcceeEeCC----CCHHHHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLP----LSEESMLTALRFAI 530 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~----~gg~~e~i~~~~~~~~~~~~~~~G~~~~~----~d~~~la~~i~~~l 530 (576)
++|.. +-+.+.+|||++|+|+|+.. ..+..+.+.+ .+.|..+++ .+++++++++.+++
T Consensus 289 ~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~~~l~~ai~~ll 354 (391)
T 3tsa_A 289 LVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAA----------AGAGICLPDEQAQSDHEQFTDSIATVL 354 (391)
T ss_dssp EEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHH----------TTSEEECCSHHHHTCHHHHHHHHHHHH
T ss_pred EEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHH----------cCCEEecCcccccCCHHHHHHHHHHHH
Confidence 99954 44579999999999999954 3445566666 678999887 68899999988887
Q ss_pred HHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
. |++.+.++++.+ +....+++++++.+.++.
T Consensus 355 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 387 (391)
T 3tsa_A 355 G----DTGFAAAAIKLSDEITAMPHPAALVRTLENTA 387 (391)
T ss_dssp T----CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC-
T ss_pred c----CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 5 777777776655 556789999888876654
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.2e-10 Score=120.08 Aligned_cols=154 Identities=13% Similarity=0.127 Sum_probs=105.8
Q ss_pred CCCEEEEecccccc-------cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHH
Q 008154 381 DCPLIGFIGRLDYQ-------KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 453 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~-------Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 453 (576)
...++++.|++... +.+..+++++..+ ++++++++.+ +..+ .+. ....++.. ++.+ . ..+
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~-~~~~----~l~-~~~~~v~~--~~~~-~-~~~ 276 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPD-TVAE----ALR-AEVPQARV--GWTP-L-DVV 276 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCH-HHHH----HHH-HHCTTSEE--ECCC-H-HHH
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCC-CCHH----hhC-CCCCceEE--cCCC-H-HHH
Confidence 35678889998865 5677788887665 7888886554 2211 111 23334443 4432 2 358
Q ss_pred HhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHH
Q 008154 454 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALR 527 (576)
Q Consensus 454 l~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~ 527 (576)
++.||++|..+ -+.|++|||++|+|+|+...++ +.+.+.+ .++|+.+++. ++++++++|.
T Consensus 277 l~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~~i~ 342 (384)
T 2p6p_A 277 APTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD----------YGAAIALLPGEDSTEAIADSCQ 342 (384)
T ss_dssp GGGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------HTSEEECCTTCCCHHHHHHHHH
T ss_pred HhhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHH----------CCCeEecCcCCCCHHHHHHHHH
Confidence 89999999863 3468999999999999987643 5555655 5788888754 6889999998
Q ss_pred HHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 528 FAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 528 ~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
+++. |++.++++.+.+ +...-..++.++...++.
T Consensus 343 ~ll~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 343 ELQA----KDTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHH----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHc----CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 8876 777777766655 444557777777666554
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.37 E-value=8.8e-13 Score=135.86 Aligned_cols=220 Identities=10% Similarity=0.012 Sum_probs=135.6
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
+.+|.+++.++..++.+.+ .+.+++++.++.|. +|...+.. ....+..+++.
T Consensus 145 ~~a~~~~~~te~~~~~l~~----------~G~~~~~I~vtGnp~~D~~~~~~-----------------~~~~~~~~~~~ 197 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIA----------EGLPAELTFKSGSHMPEVLDRFM-----------------PKILKSDILDK 197 (385)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCSHHHHHHHHH-----------------HHHHHCCHHHH
T ss_pred hhhceeecCCHHHHHHHHH----------cCCCcCcEEEECCchHHHHHHhh-----------------hhcchhHHHHH
Confidence 5788999999877766532 24456688888884 34211100 00113346777
Q ss_pred cCCCCCCCCCEEEEecccc---cccCHHHHHHHHHhhhcC-CcEEEEEeCCChhhHHHHHHH-H-HHhcCceEEEccCCh
Q 008154 374 LGLPIRPDCPLIGFIGRLD---YQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDT-E-ATYKDKYRGWVGFNV 447 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~---~~Kg~~~ll~a~~~L~~~-~~~lii~G~g~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 447 (576)
+|++ ++..++++.+|.+ ..|++..+++|+.++.++ ++++++... |...+..+.. . .....++........
T Consensus 198 lgl~--~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~~~lg~ 273 (385)
T 4hwg_A 198 LSLT--PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSF 273 (385)
T ss_dssp TTCC--TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEECCCCCH
T ss_pred cCCC--cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEEcCCCH
Confidence 8886 3556677777754 347899999999998653 677776543 3333333222 1 011234544444443
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc-ccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
.....+++.||+++.+| |....||+++|+|+|+.... ..+|.+.. +++.+++. |++++++++
T Consensus 274 ~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~-----------G~~~lv~~-d~~~i~~ai 336 (385)
T 4hwg_A 274 TDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDA-----------GTLIMSGF-KAERVLQAV 336 (385)
T ss_dssp HHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHH-----------TCCEECCS-SHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhc-----------CceEEcCC-CHHHHHHHH
Confidence 34568999999999766 56779999999999998654 36777665 46777654 899999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHH--H-hhhCCHHHHHHHHHHHHH
Q 008154 527 RFAIRTYREHKSSWEGLMRRG--M-EKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a--~-~~~fs~~~~~~~y~~~y~ 566 (576)
.+++. |+..+.+|++++ . ....+.+++++...+.+.
T Consensus 337 ~~ll~----d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~~ 375 (385)
T 4hwg_A 337 KTITE----EHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYVD 375 (385)
T ss_dssp HHHHT----TCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHHHH
T ss_pred HHHHh----ChHHHHHhhccCCCCCCCChHHHHHHHHHHHHhh
Confidence 98875 444443332211 2 333455666665555443
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.8e-08 Score=102.82 Aligned_cols=158 Identities=12% Similarity=0.023 Sum_probs=99.1
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|+.. .+..+.+.+.++.+.+.++++++ +|.+... +.. .....++. +.++-+.. .+++.||+
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~-~~~-----~~~~~~v~-~~~~~~~~--~~l~~~d~ 324 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP-ADL-----GEVPPNVE-VHQWVPQL--DILTKASA 324 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG-GGG-----CSCCTTEE-EESSCCHH--HHHTTCSE
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh-HHh-----ccCCCCeE-EecCCCHH--HHHhhCCE
Confidence 456777889887 44444444444555445777754 6765321 111 11334544 44554433 68999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHh
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTY 533 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~ 533 (576)
+|..+ -+.|++|||++|+|+|+....+ +.+.+.+ .+.|+.++.. +.++++++|.+++.
T Consensus 325 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~ll~-- 388 (424)
T 2iya_A 325 FITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE----------LGLGRHIPRDQVTAEKLREAVLAVAS-- 388 (424)
T ss_dssp EEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------TTSEEECCGGGCCHHHHHHHHHHHHH--
T ss_pred EEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHH----------CCCEEEcCcCCCCHHHHHHHHHHHHc--
Confidence 98642 2379999999999999987642 3344444 4678877654 78889998888875
Q ss_pred hhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 534 ~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
|++.++++.+.+ +...-..++.++.+.+...
T Consensus 389 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 389 --DPGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp --CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 676666555543 3344566666666665543
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=98.96 E-value=8.6e-09 Score=109.78 Aligned_cols=181 Identities=14% Similarity=0.077 Sum_probs=110.9
Q ss_pred cCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEE--EEeCCChhhHHHHHHH-HHHhcCceEEEccCChh
Q 008154 374 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFV--MLGSGDPQFESWMRDT-EATYKDKYRGWVGFNVP 448 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~li--i~G~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 448 (576)
++++.+.+.++++..++ ..|..+.+++++.++.+ ++..+. ++|+++.......+.+ +.....++.+....+.+
T Consensus 433 ~~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~ 510 (631)
T 3q3e_A 433 YLLRENPEVVNIGIAST--TMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYH 510 (631)
T ss_dssp CCCCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHH
T ss_pred ccCCcCCCeEEEEECCc--cccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHH
Confidence 45553223567777776 47889999999999876 444443 3675432223333333 23444566554433444
Q ss_pred HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHH
Q 008154 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 449 ~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
.....++.+|++|.|+.+.+ |+|.+|||++|+|||+.....+.+-+..--.. ..|-.+|++.. |.++.++....
T Consensus 511 e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~----~~GLpE~LIA~-d~eeYv~~Av~ 584 (631)
T 3q3e_A 511 QYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFK----RLGLPEWLIAN-TVDEYVERAVR 584 (631)
T ss_dssp HHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHH----HTTCCGGGEES-SHHHHHHHHHH
T ss_pred HHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHH----hcCCCcceecC-CHHHHHHHHHH
Confidence 55578899999999998755 99999999999999997766655444210000 00344543333 67777776666
Q ss_pred HHHHhhhCHHHHHHHHHHHHhh-----hCCHHHHHHHHHHHHHHh
Q 008154 529 AIRTYREHKSSWEGLMRRGMEK-----DYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 529 ~l~~~~~~~~~~~~~~~~a~~~-----~fs~~~~~~~y~~~y~~~ 568 (576)
+.. |++.+.++.++.... .|+ ..+++|.+.|+.+
T Consensus 585 La~----D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~ 623 (631)
T 3q3e_A 585 LAE----NHQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEK 623 (631)
T ss_dssp HHH----CHHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHH
T ss_pred HhC----CHHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHH
Confidence 654 888888887765322 343 3344444444444
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=3.3e-07 Score=95.03 Aligned_cols=153 Identities=14% Similarity=-0.013 Sum_probs=95.7
Q ss_pred CCCEEEEecccc-cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLD-YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|+.. ..+.+..+++++..+ ++++++.+.... .+. .....++. +.++.+. ..++..||+
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~~------~~~~~~v~-~~~~~~~--~~ll~~~d~ 287 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LGR------IDEGDDCL-VVGEVNH--QVLFGRVAA 287 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CCC------SSCCTTEE-EESSCCH--HHHGGGSSE
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-ccc------ccCCCCEE-EecCCCH--HHHHhhCcE
Confidence 456788889988 677778888888776 677777654321 110 01233444 3455332 358899999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCcccc----ccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHh
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL----RDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTY 533 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~----~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~ 533 (576)
+|..+ -..|..||+++|+|+|+....+- .+.+.. .+.|..++.. +.+++++++.+++
T Consensus 288 ~v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~----------~G~g~~l~~~~~~~~~l~~ai~~ll--- 350 (404)
T 3h4t_A 288 VVHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD----------LGVGVAHDGPTPTVESLSAALATAL--- 350 (404)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------HTSEEECSSSSCCHHHHHHHHHHHT---
T ss_pred EEECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH----------CCCEeccCcCCCCHHHHHHHHHHHh---
Confidence 99654 23688999999999999755432 233433 4677777643 6788888888775
Q ss_pred hhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 534 ~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
+ ++.++++.+.+ +.. -.++++++...+.+.
T Consensus 351 -~-~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 351 -T-PGIRARAAAVAGTIRT-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp -S-HHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHH
T ss_pred -C-HHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHh
Confidence 3 45555554443 223 455666666555543
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.7e-07 Score=96.82 Aligned_cols=154 Identities=18% Similarity=0.128 Sum_probs=89.9
Q ss_pred CCCEEEEecccccc-cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQ-KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~-Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|++... ++.+.+.++++.+.+.+.++++.+.+... .. ......++. ..++-+ ...++..+|+
T Consensus 237 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~-~~-----~~~~~~~v~-~~~~~p--~~~lL~~~~~ 307 (400)
T 4amg_A 237 RRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL-AL-----LGELPANVR-VVEWIP--LGALLETCDA 307 (400)
T ss_dssp CCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC-CC-----CCCCCTTEE-EECCCC--HHHHHTTCSE
T ss_pred CcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc-cc-----cccCCCCEE-EEeecC--HHHHhhhhhh
Confidence 44566777887654 34455566666666667888876654311 00 012234544 333422 2258899999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhh
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~ 535 (576)
+|.- +-..|++|||++|+|+|+....+ +.+.+.+ .+.|+.+++. +..+++|.+++.
T Consensus 308 ~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~----------~G~g~~l~~~--~~~~~al~~lL~---- 367 (400)
T 4amg_A 308 IIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG----------LGIGFDAEAG--SLGAEQCRRLLD---- 367 (400)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH----------HTSEEECCTT--TCSHHHHHHHHH----
T ss_pred eecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH----------CCCEEEcCCC--CchHHHHHHHHc----
Confidence 9853 34578999999999999965433 3344444 4567776543 345667888775
Q ss_pred CHHHHHHHHHHH--HhhhCCHHHHHHHHHH
Q 008154 536 HKSSWEGLMRRG--MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 536 ~~~~~~~~~~~a--~~~~fs~~~~~~~y~~ 563 (576)
|++.+++..+-+ ++..=+....++.+++
T Consensus 368 d~~~r~~a~~l~~~~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 368 DAGLREAALRVRQEMSEMPPPAETAAXLVA 397 (400)
T ss_dssp CHHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 776555444332 3444466666666554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.3e-07 Score=85.36 Aligned_cols=128 Identities=14% Similarity=0.041 Sum_probs=91.0
Q ss_pred CCCEEEEecccc---cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--h
Q 008154 381 DCPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--A 455 (576)
Q Consensus 381 ~~~~i~~~Gr~~---~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~ 455 (576)
...++++.|++. +.|.+..+++++..+ +.++++++.+... + ....++. +.++-+. ..++ +
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~-~--------~~~~~v~-~~~~~~~--~~~l~~~ 85 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP-D--------TLGLNTR-LYKWIPQ--NDLLGHP 85 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC-T--------TCCTTEE-EESSCCH--HHHHTST
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc-c--------cCCCcEE-EecCCCH--HHHhcCC
Confidence 456888899986 678888888888665 5788887765421 1 1233554 4455332 1356 8
Q ss_pred cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHH
Q 008154 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFA 529 (576)
Q Consensus 456 ~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~ 529 (576)
.||++|.. +-+.|++|||++|+|+|+.... ++.+.+.+ .+.|+.+++. ++++++++|.++
T Consensus 86 ~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 86 KTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA----------RGAAVRVDFNTMSSTDLLNALKRV 151 (170)
T ss_dssp TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT----------TTSEEECCTTTCCHHHHHHHHHHH
T ss_pred CcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH----------cCCeEEeccccCCHHHHHHHHHHH
Confidence 99999974 4569999999999999999764 34555655 6789988766 789999999988
Q ss_pred HHHhhhCHHHHH
Q 008154 530 IRTYREHKSSWE 541 (576)
Q Consensus 530 l~~~~~~~~~~~ 541 (576)
+. |++.+.
T Consensus 152 l~----~~~~~~ 159 (170)
T 2o6l_A 152 IN----DPSYKE 159 (170)
T ss_dssp HH----CHHHHH
T ss_pred Hc----CHHHHH
Confidence 75 665433
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.64 E-value=2.3e-06 Score=88.97 Aligned_cols=133 Identities=12% Similarity=0.000 Sum_probs=86.8
Q ss_pred CCCEEEEecccc---cccCHHHHHHHHHhhhcCCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhc
Q 008154 381 DCPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 456 (576)
Q Consensus 381 ~~~~i~~~Gr~~---~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 456 (576)
+..++++.|+.. ..|....+++++..+ +++++++ |.++... .....++. +.++-+. ..++..
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~~--------~~~~~~v~-~~~~~~~--~~ll~~ 302 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELVL--------PDDRDDCF-AIDEVNF--QALFRR 302 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCCC--------SCCCTTEE-EESSCCH--HHHGGG
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCccccc--------cCCCCCEE-EeccCCh--HHHhcc
Confidence 356778889985 467777888888776 5667665 6653210 12333443 4455332 357899
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCC--CCHHHHHHHHHHHH
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLP--LSEESMLTALRFAI 530 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~--~d~~~la~~i~~~l 530 (576)
||++|.. +-+.|++||+++|+|+|+....+ +.+.+.+ .+.|+.++. .+.++++++|.++
T Consensus 303 ~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l- 367 (416)
T 1rrv_A 303 VAAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA----------LGIGVAHDGPTPTFESLSAALTTV- 367 (416)
T ss_dssp SSEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH----------HTSEEECSSSCCCHHHHHHHHHHH-
T ss_pred CCEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH----------CCCccCCCCCCCCHHHHHHHHHHh-
Confidence 9999973 33469999999999999976532 3334444 467877754 3677777777776
Q ss_pred HHhhhCHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRR 546 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~ 546 (576)
. |++.++++.+.
T Consensus 368 ~----~~~~~~~~~~~ 379 (416)
T 1rrv_A 368 L----APETRARAEAV 379 (416)
T ss_dssp T----SHHHHHHHHHH
T ss_pred h----CHHHHHHHHHH
Confidence 4 77666665544
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.1e-06 Score=92.11 Aligned_cols=156 Identities=15% Similarity=0.115 Sum_probs=106.7
Q ss_pred CCCEEEEeccccc-----ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh
Q 008154 381 DCPLIGFIGRLDY-----QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 455 (576)
Q Consensus 381 ~~~~i~~~Gr~~~-----~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 455 (576)
...++++.|++.. .|.+..+++++..+ ++++++++.+.. .+. +. ....++. +.++-+. ..++.
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~-~~~----l~-~~~~~v~-~~~~~~~--~~ll~ 334 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ-LEG----VA-NIPDNVR-TVGFVPM--HALLP 334 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT-TSS----CS-SCCSSEE-ECCSCCH--HHHGG
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc-hhh----hc-cCCCCEE-EecCCCH--HHHHh
Confidence 3457888899875 48888999998775 688888766532 111 11 1233443 4555433 35789
Q ss_pred cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHH
Q 008154 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFA 529 (576)
Q Consensus 456 ~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~ 529 (576)
.||++|.. +-+.|++|||++|+|+|+....+ +.+.+.+ .+.|+.+++. ++++++++|.++
T Consensus 335 ~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l 400 (441)
T 2yjn_A 335 TCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE----------FGAGIALPVPELTPDQLRESVKRV 400 (441)
T ss_dssp GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------HTSEEECCTTTCCHHHHHHHHHHH
T ss_pred hCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH----------cCCEEEcccccCCHHHHHHHHHHH
Confidence 99999974 34579999999999999997643 4555655 5788888765 788999999888
Q ss_pred HHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 530 IRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 530 l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
+. |++.+.++.+.+ +......+++++.+.++..
T Consensus 401 l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 401 LD----DPAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HH----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hc----CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 75 777777766654 4567888888888777654
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.03 E-value=2.2e-05 Score=81.48 Aligned_cols=156 Identities=13% Similarity=0.029 Sum_probs=97.6
Q ss_pred CCCEEEEeccc-ccccCHHHHHHHHHhhhcCCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRL-DYQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~-~~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
...++++.|+. ...|..+.++++++.+ +.+++++ |.++... .....++. +.++-+.. .++..||
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~~--------~~~~~~v~-~~~~~~~~--~~l~~~d 303 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLVL--------PDDGADCF-AIGEVNHQ--VLFGRVA 303 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCCC--------SSCGGGEE-ECSSCCHH--HHGGGSS
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCcccc--------cCCCCCEE-EeCcCChH--HHHhhCC
Confidence 35678888998 4888888899999876 4566665 7654210 11223443 45554332 4789999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRT 532 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~ 532 (576)
++|..+ -..|++|||++|+|+|+....+ +.+.+.+ .+.|+.++.. +.++++++|.++ .
T Consensus 304 ~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l-~- 367 (415)
T 1iir_A 304 AVIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAE----------LGVGVAHDGPIPTFDSLSAALATA-L- 367 (415)
T ss_dssp EEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------HTSEEECSSSSCCHHHHHHHHHHH-T-
T ss_pred EEEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH----------CCCcccCCcCCCCHHHHHHHHHHH-c-
Confidence 999752 2369999999999999986643 4444544 5678887643 678777777776 4
Q ss_pred hhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 533 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
|++.++++.+.+ +.+....-+++..+.++++++.
T Consensus 368 ---~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 368 ---TPETHARATAVA--GTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp ---SHHHHHHHHHHH--HHSCSCHHHHHHHHHHHHHHTC
T ss_pred ---CHHHHHHHHHHH--HHHhhcChHHHHHHHHHHHHhc
Confidence 666665554433 2233344444555555555543
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0023 Score=70.97 Aligned_cols=184 Identities=9% Similarity=-0.089 Sum_probs=108.7
Q ss_pred HHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-h-cCceEEEccCC
Q 008154 371 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-Y-KDKYRGWVGFN 446 (576)
Q Consensus 371 ~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 446 (576)
|..+|+| .+.++++...+ .+|=-+..++.+.++.+ ++.+|++............+.+++. . ..++++....+
T Consensus 514 R~~~gLp--~~~v~f~~fN~--~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~ 589 (723)
T 4gyw_A 514 RSQYGLP--EDAIVYCNFNQ--LYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAP 589 (723)
T ss_dssp GGGGTCC--TTSEEEECCSC--GGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCC
T ss_pred hhhcCCC--CCCEEEEeCCc--cccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCC
Confidence 4567888 46555555444 46667777888877765 7889988877643323333333321 1 24565554444
Q ss_pred hhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 447 ~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
.+.-...++.+||++-|..+ +-|+|.+||+.+|+|||+-....+..-+..--.. .-|-.-++. .|.++..+.-
T Consensus 590 ~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~----~~gl~e~ia--~~~~~Y~~~a 662 (723)
T 4gyw_A 590 KEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLT----CLGCLELIA--KNRQEYEDIA 662 (723)
T ss_dssp HHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHH----HHTCGGGBC--SSHHHHHHHH
T ss_pred HHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHH----HcCCccccc--CCHHHHHHHH
Confidence 44444678999999998776 5689999999999999985432222111100000 001112222 2455544433
Q ss_pred HHHHHHhhhCHHHHHHHHHHH---H--hhhCCHHHHHHHHHHHHHHhh
Q 008154 527 RFAIRTYREHKSSWEGLMRRG---M--EKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a---~--~~~fs~~~~~~~y~~~y~~~~ 569 (576)
.++. .|++.+.++.++- + ..-|+..++++.+++.|+.+.
T Consensus 663 ~~la----~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w 706 (723)
T 4gyw_A 663 VKLG----TDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMW 706 (723)
T ss_dssp HHHH----HCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHh----cCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHH
Confidence 3333 3666555544332 2 236999999999999998874
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.066 Score=53.38 Aligned_cols=112 Identities=16% Similarity=0.116 Sum_probs=74.3
Q ss_pred HHHHHHHcCCCCCCCCCEEEEecc-cccccCHH--HHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhc----Cce
Q 008154 367 KIALQKELGLPIRPDCPLIGFIGR-LDYQKGID--LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK----DKY 439 (576)
Q Consensus 367 ~~~~~~~~~i~~~~~~~~i~~~Gr-~~~~Kg~~--~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~----~~~ 439 (576)
.+.+++.+|++. ++..+++..|. ..+.|.+. .+.+++++|.++++++++.|... ..+..+.+.+... .++
T Consensus 167 ~~~~~~~~~~~~-~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSS-ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCS-SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCC-CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccce
Confidence 445667777652 23345555665 55667765 88888888877789999988643 3444455543322 244
Q ss_pred EEEcc-CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 440 RGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 440 ~~~~~-~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
+.+.+ .+..+...+++.||++|-+. .|..-+ |.|+|+|+|+-
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 44444 34556668999999999875 455555 99999999995
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.03 Score=54.25 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=58.8
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
.++++.|..+...-...+++++... .. -.++.|.+.+..++..+.... . .++. ..++.++ +..+|+.||+.|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~~~~~l~~~~~~-~-~~v~-v~~~~~~-m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNPNLKKLQKFAKL-H-NNIR-LFIDHEN-IAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCTTHHHHHHHHHT-C-SSEE-EEESCSC-HHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCchHHHHHHHHHhh-C-CCEE-EEeCHHH-HHHHHHHCCEEEE
Confidence 4566777665443334455554432 23 456678886655554443332 2 2443 3445444 4579999999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
+ .|+|+.|++++|+|.|...
T Consensus 232 ~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 232 S-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp E-----SSHHHHHHHHTTCCEEEEC
T ss_pred C-----CcHHHHHHHHcCCCEEEEe
Confidence 4 4789999999999999865
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=94.54 E-value=0.27 Score=50.97 Aligned_cols=134 Identities=16% Similarity=0.068 Sum_probs=74.0
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
+..+++..|..... ..+.+.+.+..|.+.+.+++++-..+. .+..-+...+....+... .++-+.. .+++.+++-
T Consensus 273 ~~vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~v-v~w~Pq~--~vL~h~~v~ 347 (454)
T 3hbf_A 273 SSVVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKI-VAWAPQV--EILKHSSVG 347 (454)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEE-ESSCCHH--HHHHSTTEE
T ss_pred CceEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEE-EeeCCHH--HHHhhcCcC
Confidence 44566777776642 234444444444333667777544321 111111222233445443 3554432 689999954
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCC-cceeEeCC--CCHHHHHHHHHHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGE-GTGWSFLP--LSEESMLTALRFAIR 531 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~-~~G~~~~~--~d~~~la~~i~~~l~ 531 (576)
++-+. +=..|.+||+++|+|.|+....+ +...+.+ . +.|..++. -+.+++.++|.+++.
T Consensus 348 ~fvtH--~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~----------~~g~Gv~l~~~~~~~~~l~~av~~ll~ 413 (454)
T 3hbf_A 348 VFLTH--SGWNSVLECIVGGVPMISRPFFGDQGLNTILTES----------VLEIGVGVDNGVLTKESIKKALELTMS 413 (454)
T ss_dssp EEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT----------TSCSEEECGGGSCCHHHHHHHHHHHHS
T ss_pred eEEec--CCcchHHHHHHcCCCEecCcccccHHHHHHHHHH----------hhCeeEEecCCCCCHHHHHHHHHHHHC
Confidence 44332 22368899999999999965422 1122222 2 56666654 367888888888874
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=94.30 E-value=0.16 Score=52.86 Aligned_cols=131 Identities=8% Similarity=-0.038 Sum_probs=71.5
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cC
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~ 457 (576)
+..+++..|..... ..+.+.+.+..|.+.+.+++++ |... ....-+...+....++. ..++-+.. .+++ .+
T Consensus 271 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~--~~~l~~~~~~~~~~~~~-v~~w~pq~--~vL~h~~~ 344 (456)
T 2c1x_A 271 TSVVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKA--RVHLPEGFLEKTRGYGM-VVPWAPQA--EVLAHEAV 344 (456)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGG--GGGSCTTHHHHHTTTEE-EESCCCHH--HHHTSTTE
T ss_pred cceEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcc--hhhCCHHHHhhcCCceE-EecCCCHH--HHhcCCcC
Confidence 44666777777643 2344444444443335666654 4321 11100111112233443 33454332 5788 67
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCC-cceeEeCCC--CHHHHHHHHHHHH
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGE-GTGWSFLPL--SEESMLTALRFAI 530 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~-~~G~~~~~~--d~~~la~~i~~~l 530 (576)
|++|.- +=..|.+||+++|+|.|+....+ +...+.+ . +.|+.++.+ +.++++++|.+++
T Consensus 345 ~~fvth----~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~----------~~g~g~~l~~~~~~~~~l~~~i~~ll 410 (456)
T 2c1x_A 345 GAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVED----------VLEIGVRIEGGVFTKSGLMSCFDQIL 410 (456)
T ss_dssp EEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------TSCCEEECGGGSCCHHHHHHHHHHHH
T ss_pred CEEEec----CCcchHHHHHHhCceEEecCChhhHHHHHHHHHH----------HhCeEEEecCCCcCHHHHHHHHHHHH
Confidence 788753 34578999999999999975421 1222222 3 566666532 6788888888887
Q ss_pred H
Q 008154 531 R 531 (576)
Q Consensus 531 ~ 531 (576)
.
T Consensus 411 ~ 411 (456)
T 2c1x_A 411 S 411 (456)
T ss_dssp H
T ss_pred C
Confidence 5
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=93.77 E-value=0.71 Score=48.25 Aligned_cols=136 Identities=7% Similarity=-0.133 Sum_probs=73.5
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCCh--------------hhH-HHHHHHHHHhcCceEEEccC
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP--------------QFE-SWMRDTEATYKDKYRGWVGF 445 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~--------------~~~-~~~~~~~~~~~~~~~~~~~~ 445 (576)
...+++..|.... ...+.+.+.+..|.+.+.+++++-.... ... ..-+...++...+-....++
T Consensus 268 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w 346 (480)
T 2vch_A 268 GSVLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFW 346 (480)
T ss_dssp TCEEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESC
T ss_pred CceEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCc
Confidence 4566777788763 2445555555555445777777543211 000 00011111222222223334
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----cccccc-ccccccccCCCCCcceeEeCC----
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTV-ENFNPFAREGSGEGTGWSFLP---- 516 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i-~~~~~~~~~~~~~~~G~~~~~---- 516 (576)
-+.. .+++.+++-++=+. +=..|.+||+++|+|.|+-... .+...+ .. -+.|..+..
T Consensus 347 ~Pq~--~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~----------~G~g~~l~~~~~~ 412 (480)
T 2vch_A 347 APQA--QVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSED----------IRAALRPRAGDDG 412 (480)
T ss_dssp CCHH--HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT----------TCCEECCCCCTTS
T ss_pred cCHH--HHhCCCCcCeEEec--ccchhHHHHHHcCCCEEeccccccchHHHHHHHHH----------hCeEEEeecccCC
Confidence 3332 68999996333322 2346889999999999996542 122222 22 355665543
Q ss_pred -CCHHHHHHHHHHHHH
Q 008154 517 -LSEESMLTALRFAIR 531 (576)
Q Consensus 517 -~d~~~la~~i~~~l~ 531 (576)
-+.++++++|.+++.
T Consensus 413 ~~~~~~l~~av~~vl~ 428 (480)
T 2vch_A 413 LVRREEVARVVKGLME 428 (480)
T ss_dssp CCCHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHhc
Confidence 267888999988874
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=93.13 E-value=0.62 Score=46.43 Aligned_cols=119 Identities=13% Similarity=-0.001 Sum_probs=75.9
Q ss_pred HHHHcCCCCCCCCC-EEEEecccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEcc-C
Q 008154 370 LQKELGLPIRPDCP-LIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-F 445 (576)
Q Consensus 370 ~~~~~~i~~~~~~~-~i~~~Gr~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~-~ 445 (576)
+.+..|++ ++.. +++..|.=.+.|.. +.+.+.+++|.+++.++++.|... ..+..+.+.+....+.+.+.+ .
T Consensus 175 ~l~~~g~~--~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~~ 250 (349)
T 3tov_A 175 FYSSHGLT--DTDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGKF 250 (349)
T ss_dssp HHHHTTCC--TTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTCC
T ss_pred HHHHcCCC--CCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCCC
Confidence 33455665 3334 44555543456665 578888888876678888887643 455555665544444444443 3
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
+..+...+++.||++|-+ -.|..-+ |.|.|+|+|+--.+..+....+
T Consensus 251 sl~e~~ali~~a~~~i~~----DsG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P 297 (349)
T 3tov_A 251 QLGPLAAAMNRCNLLITN----DSGPMHV-GISQGVPIVALYGPSNPFFYGP 297 (349)
T ss_dssp CHHHHHHHHHTCSEEEEE----SSHHHHH-HHTTTCCEEEECSSCCHHHHSC
T ss_pred CHHHHHHHHHhCCEEEEC----CCCHHHH-HHhcCCCEEEEECCCCccccCC
Confidence 556677899999999976 3566667 8999999999643333343433
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=92.20 E-value=0.65 Score=48.28 Aligned_cols=132 Identities=16% Similarity=0.160 Sum_probs=71.9
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCC-hhh-HHHHHHHHHHhcCceEEEccCChhHHHHHHh--c
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQF-ESWMRDTEATYKDKYRGWVGFNVPISHRITA--G 456 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~ 456 (576)
...+++..|.....-+.+.+.+.+..|.+.+.+++++-... ... +...+.... ..+.. ..++-+.. .+++ .
T Consensus 276 ~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~--~~~~~-v~~w~pq~--~vL~h~~ 350 (463)
T 2acv_A 276 KSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL--EGKGM-ICGWAPQV--EVLAHKA 350 (463)
T ss_dssp TCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH--HCSEE-EESSCCHH--HHHHSTT
T ss_pred CceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc--CCCEE-EEccCCHH--HHhCCCc
Confidence 44666777877622233444444444433467777654332 111 111122110 23433 33454432 4676 6
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccc-cccccccccCCCCCcceeEe-C---C----CCHHHHH
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDT-VENFNPFAREGSGEGTGWSF-L---P----LSEESML 523 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~-i~~~~~~~~~~~~~~~G~~~-~---~----~d~~~la 523 (576)
+|++|.- +=..|.+||+++|+|.|+....+ +... +.. -+.|+.+ . . -+.+++.
T Consensus 351 ~~~fvth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~----------~g~g~~l~~~~~~~~~~~~~~~l~ 416 (463)
T 2acv_A 351 IGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE----------WGVGLGLRVDYRKGSDVVAAEEIE 416 (463)
T ss_dssp EEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT----------SCCEEESCSSCCTTCCCCCHHHHH
T ss_pred cCeEEec----CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHH----------cCeEEEEecccCCCCccccHHHHH
Confidence 7778753 34578999999999999975421 1222 222 4567776 2 2 2678888
Q ss_pred HHHHHHHH
Q 008154 524 TALRFAIR 531 (576)
Q Consensus 524 ~~i~~~l~ 531 (576)
++|.++++
T Consensus 417 ~ai~~ll~ 424 (463)
T 2acv_A 417 KGLKDLMD 424 (463)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 88888874
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=91.42 E-value=0.22 Score=46.23 Aligned_cols=43 Identities=14% Similarity=0.116 Sum_probs=32.9
Q ss_pred EccCChhHHHHHHh-cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc
Q 008154 442 WVGFNVPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 489 (576)
Q Consensus 442 ~~~~~~~~~~~ll~-~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g 489 (576)
..+|.++ +..+++ .||++|.- +=..|++|++++|+|.|.....
T Consensus 118 v~~f~~~-m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 118 GFDFSTK-MQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp ECCSSSS-HHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCS
T ss_pred Eeeccch-HHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCc
Confidence 3366544 447899 99999954 4567999999999999997653
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=91.29 E-value=2.2 Score=44.47 Aligned_cols=133 Identities=8% Similarity=-0.082 Sum_probs=72.1
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCCh---hhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcC
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP---QFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 457 (576)
...++++.|.... ...+.+.+.+..|.+.+.+++++-..+. ......+...+....++. ..++-+.. .+++.+
T Consensus 295 ~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~-v~~~~pq~--~~L~h~ 370 (482)
T 2pq6_A 295 GSVVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGL-IASWCPQD--KVLNHP 370 (482)
T ss_dssp TCEEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEE-EESCCCHH--HHHTST
T ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEE-EEeecCHH--HHhcCC
Confidence 3456666777653 2334444444444445678777643210 000001111222334443 34454433 488776
Q ss_pred CE--EEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccc-cccccccCCCCCcceeEeCC-CCHHHHHHHHHHH
Q 008154 458 DI--LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVE-NFNPFAREGSGEGTGWSFLP-LSEESMLTALRFA 529 (576)
Q Consensus 458 Dv--~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~-~~~~~~~~~~~~~~G~~~~~-~d~~~la~~i~~~ 529 (576)
++ +|.- +=..|++||+++|+|.|+....+ +...+. . -+.|+.++. -+.+++.++|.++
T Consensus 371 ~~~~~vth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~----------~G~g~~l~~~~~~~~l~~~i~~l 436 (482)
T 2pq6_A 371 SIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE----------WEIGMEIDTNVKREELAKLINEV 436 (482)
T ss_dssp TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT----------SCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCCEEEec----CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH----------hCEEEEECCCCCHHHHHHHHHHH
Confidence 66 5532 34578999999999999975532 111121 1 356666652 2678888888888
Q ss_pred HH
Q 008154 530 IR 531 (576)
Q Consensus 530 l~ 531 (576)
+.
T Consensus 437 l~ 438 (482)
T 2pq6_A 437 IA 438 (482)
T ss_dssp HT
T ss_pred Hc
Confidence 74
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=90.42 E-value=1.5 Score=42.95 Aligned_cols=99 Identities=11% Similarity=0.046 Sum_probs=64.3
Q ss_pred CCCEEEEecccccccCHH--HHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRLDYQKGID--LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~--~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
+..+++..|.=.+.|... .+.+.+++|.+++.++++.+.+ +...+..+.+.+... .+......+-.+...+++.||
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~-~~e~~~~~~i~~~~~-~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGA-PHEEERAKRLAEGFA-YVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSS-HHHHHHHHHHHTTCT-TEEECCCCCHHHHHHHHHTCS
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCC-HHHHHHHHHHHhhCC-cccccCCCCHHHHHHHHHhCC
Confidence 334555556545566654 8888888887778888887434 333444555544332 232222335566678999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
++|-+- .|..=+ |.|.|+|+|+-
T Consensus 256 l~I~~D----SG~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 256 FVVSVD----TGLSHL-TAALDRPNITV 278 (326)
T ss_dssp EEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred EEEecC----CcHHHH-HHHcCCCEEEE
Confidence 999773 566667 77899999985
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=86.29 E-value=5.1 Score=44.12 Aligned_cols=196 Identities=11% Similarity=0.026 Sum_probs=99.7
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCC--CCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITE--WNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
....|.+++.|+...+.+. ..+..... .++.-|..-.. +... ......+.++
T Consensus 476 ~~~~D~~~~~s~~~~~~~~---------~~f~~~~~--~i~~~G~PR~D~l~~~~---------------~~~~~~~~~~ 529 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFR---------SAFWMDEE--RILEIGYPRNDVLVNRA---------------NDQEYLDEIR 529 (729)
T ss_dssp HTTCSEEEESSHHHHHHHH---------HHTCCCGG--GEEESCCGGGHHHHHST---------------TCHHHHHHHH
T ss_pred hccCCEEEeCCHHHHHHHH---------HHhCCCcc--eEEEcCCCchHHHhccc---------------chHHHHHHHH
Confidence 3457899999887665442 23333323 34455553211 1011 1122356778
Q ss_pred HHcCCCCCCCCCEEEEeccccccc----C-----HHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEE
Q 008154 372 KELGLPIRPDCPLIGFIGRLDYQK----G-----IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW 442 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~~K----g-----~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~ 442 (576)
+.++++ +++.+|+|+-.+.... + ...-++.+.+....+..+++ ..||....... .......++..
T Consensus 530 ~~~~~~--~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~--r~Hp~~~~~~~--~~~~~~~~~~~ 603 (729)
T 3l7i_A 530 THLNLP--SDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILL--RMHYLISNALD--LSGYENFAIDV 603 (729)
T ss_dssp HHTTCC--SSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEE--CCCHHHHTTCC--CTTCTTTEEEC
T ss_pred HHhCCC--CCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEE--ecCcchhcccc--ccccCCcEEeC
Confidence 889987 6789999998766431 1 11223334333234555554 55553211100 01122334333
Q ss_pred ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHH
Q 008154 443 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESM 522 (576)
Q Consensus 443 ~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~l 522 (576)
..+. ....++..+|++|- -++-++.|++..++|+|--..- ..+......+..-.......|-.+. +.+++
T Consensus 604 ~~~~--di~~ll~~aD~lIT-----DySSv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~d~~~~~pg~~~~--~~~eL 673 (729)
T 3l7i_A 604 SNYN--DVSELFLISDCLIT-----DYSSVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYMNYMEDLPGPIYT--EPYGL 673 (729)
T ss_dssp TTCS--CHHHHHHTCSEEEE-----SSCTHHHHHGGGCCCEEEECTT-TTTTTSSCCSBSSCTTSSSSSCEES--SHHHH
T ss_pred CCCc--CHHHHHHHhCEEEe-----echHHHHhHHhhCCCEEEecCC-HHHHhhccCCcccChhHhCCCCeEC--CHHHH
Confidence 3332 24578999999984 3555899999999999986321 1111110000000000012233332 78888
Q ss_pred HHHHHHHHH
Q 008154 523 LTALRFAIR 531 (576)
Q Consensus 523 a~~i~~~l~ 531 (576)
.++|.+...
T Consensus 674 ~~~i~~~~~ 682 (729)
T 3l7i_A 674 AKELKNLDK 682 (729)
T ss_dssp HHHHTTHHH
T ss_pred HHHHhhhhc
Confidence 888887754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 576 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 4e-97 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 5e-40 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 5e-11 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 302 bits (773), Expect = 4e-97
Identities = 172/504 (34%), Positives = 246/504 (48%), Gaps = 32/504 (6%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
N++ V++E P KTGGL DV G+LP+AL A G R + P Y D
Sbjct: 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY------PAVKAAVTDPV 55
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDING-AFGDNQFRYTLL 184
C + GE + E +D + +D P+Y R G PY G + DN R+ L
Sbjct: 56 KCFEFTDLLGE-KADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAAL 114
Query: 185 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 244
AA + G + +DW A + PV + P S+L IHN+
Sbjct: 115 SLAAARIGAGVLPGW----RPDMVHAHDWQAAMTPVYMRYAETPE-----IPSLLTIHNI 165
Query: 245 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304
+ QG A + L LP+ +G + V+ LKG + TA L TVS
Sbjct: 166 AFQGQFGANIFSKLALPAHAFGMEGIEYY-----------NDVSFLKGGLQTATALSTVS 214
Query: 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKV 364
Y+ EI T E G GL ++ SR VL+GI NGID WNP++D I +YS +L +
Sbjct: 215 PSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRA 274
Query: 365 QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQF 424
K A+ + + PL I RL +QKGIDL+ A EI++ + V+LG+GD
Sbjct: 275 LNKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVAL 333
Query: 425 ESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPV 484
E + + + + +G+N P+SH + AGCD +++PSRFEPCGL QLYA+RYG IPV
Sbjct: 334 EGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPV 393
Query: 485 VHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 544
V TGGL DTV + N A TG F P++ + + A+R +R Y W +
Sbjct: 394 VARTGGLADTVIDANHAALASKA-ATGVQFSPVTLDGLKQAIRRTVRYYH-DPKLWTQMQ 451
Query: 545 RRGMEKDYTWENAAIQYEQVFEWA 568
+ GM+ D +WE +A Y ++
Sbjct: 452 KLGMKSDVSWEKSAGLYAALYSQL 475
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 149 bits (375), Expect = 5e-40
Identities = 96/506 (18%), Positives = 172/506 (33%), Gaps = 83/506 (16%)
Query: 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 126
++ + E P K GGL + ++ ALA+ GH V+V +P + +
Sbjct: 2 KVLLLGFEFLPV-KVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIG-------- 52
Query: 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCY 186
KI FG E ++ +E R + + +G +
Sbjct: 53 ---KIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLI----RKAVTFGR 105
Query: 187 AACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSH 246
A+ L + +DWH L+ ++ ++ IH L
Sbjct: 106 ASVLLLNDLLREEPLPD---VVHFHDWHTVFAGALIKKYFKI-------PAVFTIHRL-- 153
Query: 247 QGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306
L + A L ++ AD + TVS+G
Sbjct: 154 -----------------NKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRG 196
Query: 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 366
Y + +G + + + NGID + WN S +
Sbjct: 197 YLIDE------WGFFRNFEGKITY---VFNGIDCSFWNESYLTGSRD-----------ER 236
Query: 367 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIR----LAAPEILADDIQFVMLGSGDP 422
K +L + G+ + QKG+D++ + + + +++F+++G GDP
Sbjct: 237 KKSLLSKFGMD--EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP 294
Query: 423 QFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI 482
+ E W R E + + + + D +++PS FEP GL L AM G I
Sbjct: 295 ELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAI 354
Query: 483 PVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542
P+ A GGLRD + N TG + A+ A+ R S +
Sbjct: 355 PIASAVGGLRDIITN-----------ETGILVKAGDPGELANAILKALELSRSDLSKF-R 402
Query: 543 LMRRGMEKDYTWENAAIQYEQVFEWA 568
+ ++WE +A +Y + + +
Sbjct: 403 ENCKKRAMSFSWEKSAERYVKAYTGS 428
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 60.2 bits (144), Expect = 5e-11
Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 33/223 (14%)
Query: 337 GIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDY-QK 395
GID + WN S + + K +L + G+ + FIGR D QK
Sbjct: 1 GIDCSFWNESYLT-----------GSRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQK 46
Query: 396 GIDLIRLAAPEILA----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISH 451
G+D++ A + + +++F+++G GDP+ E W R E + + +
Sbjct: 47 GVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVR 106
Query: 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTG 511
+ D +++PS FEP GL L AM G IP+ A GGLRD + N TG
Sbjct: 107 ELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-----------ETG 155
Query: 512 WSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTW 554
+ A+ A+ R ++ ++
Sbjct: 156 ILVKAGDPGELANAILKALELSRSD---LSKFRENCKKRAMSF 195
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 576 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 100.0 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 100.0 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.93 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.91 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.83 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.58 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.58 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.54 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.22 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.54 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 97.53 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.27 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.2 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.01 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 96.17 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 92.51 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 87.54 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 86.7 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.1e-57 Score=486.80 Aligned_cols=475 Identities=35% Similarity=0.543 Sum_probs=372.8
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++||+|++|++++||+|.++.+|+++|+++||+|+||+|.|+.- ...........-.........++++.
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAV-------KAAVTDPVKCFEFTDLLGEKADLLEV 73 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHH-------HHHCCSCEEEEEESCSSSCCEEEEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcch-------hhhcccceEEEEEeccCCceEEEEEE
Confidence 89999999999977789999999999999999999999999988541 11111111111111122334567778
Q ss_pred eecCeEEEEecCCCC-CCCCCCCCCCC-CCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 146 YREGVDWVFVDHPSY-HRPGNPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~-~~~~~~y~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
..+|++++++++|.+ .+...+|...+ .+|.+...++..++.+..+++.... . ..+|||||+|+|++++.+.+++
T Consensus 74 ~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~pDIvH~h~~~~~l~~~~~~ 149 (477)
T d1rzua_ 74 QHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVL-P---GWRPDMVHAHDWQAAMTPVYMR 149 (477)
T ss_dssp EETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCS-S---SCCCSEEEEEHHHHTTHHHHHH
T ss_pred EECCeeEEEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcc-c---CCCCCEEEecchhHHHHHHHHH
Confidence 889999999997663 44444554433 4677888888888888777665432 1 2389999999999999888777
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
.... .++|+|+|+|+..+...++...+..++.+...+..... ......++++..+..||.++++
T Consensus 150 ~~~~-----~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ad~~~~v 213 (477)
T d1rzua_ 150 YAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGI-----------EYYNDVSFLKGGLQTATALSTV 213 (477)
T ss_dssp HSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTT-----------EETTEEEHHHHHHHHCSEEEES
T ss_pred HhhC-----CCCCEEEEEecccccccCCHHHHHHhhcchhhcccccc-----------cccchhHHHHHHHHhhhhhhhc
Confidence 5443 67999999999987777777777666665544432211 1244567888899999999999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|..+++++....++.+.+........++.+|+||+|.+.|.|.....+..............+....+...++++ ++.+
T Consensus 214 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 292 (477)
T d1rzua_ 214 SPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD-DGSP 292 (477)
T ss_dssp CHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCC-SSSC
T ss_pred cHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhccccc-CCcc
Confidence 999888776544444444455556678999999999999998877767666666666667777788888888874 4678
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+|+|+||+.++||+++|++|++++.+.+++++++|.|++........+......++.+...++.++...++++||++|+|
T Consensus 293 ~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~P 372 (477)
T d1rzua_ 293 LFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIP 372 (477)
T ss_dssp EEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEEC
T ss_pred EEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccCC
Confidence 99999999999999999999999888899999999998666666666677778888888888888888899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|+||++++||||||+|||+|+.||.+|.+.+..... ....+.+|++++++|+++++++|.+++..+ +|++.|.++
T Consensus 373 S~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~-~~~~~~~G~l~~~~d~~~la~ai~~~l~~~-~~~~~~~~~ 450 (477)
T d1rzua_ 373 SRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAA-LASKAATGVQFSPVTLDGLKQAIRRTVRYY-HDPKLWTQM 450 (477)
T ss_dssp CSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHH-HHTTCCCBEEESSCSHHHHHHHHHHHHHHH-TCHHHHHHH
T ss_pred ccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccc-cccCCCceEEeCCCCHHHHHHHHHHHHhhh-CCHHHHHHH
Confidence 999999999999999999999999999999998711000 000134899999999999999999998754 689999999
Q ss_pred HHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 544 MRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 544 ~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
++++++++|||++++++|+++|+++++
T Consensus 451 ~~~a~~~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 451 QKLGMKSDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp HHHHHTCCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhC
Confidence 999998899999999999999999874
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=3.9e-45 Score=383.91 Aligned_cols=424 Identities=24% Similarity=0.344 Sum_probs=306.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||+++|.+|+| .++||+++++..|+++|+++||+|+|++|.|+.... .....+...+..........
T Consensus 1 MkIl~~~~~~pP-~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 68 (437)
T d2bisa1 1 MKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQG-----------EEIGKIRVFGEEVQVKVSYE 68 (437)
T ss_dssp CEEEEECSCCTT-CCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCC-----------EEEEEEECSSSEEEEEEEEE
T ss_pred CEEEEECCccCC-cccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccch-----------hhccceeecccccceeeeee
Confidence 899999999999 457999999999999999999999999998865321 12223334455556666667
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
..++++++++..+.+.+. ..|... +.+...+...++......+..+... ...|||||+|++++++++.++++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~pDiIh~~~~~~~~~~~~~~~~ 141 (437)
T d2bisa1 69 ERGNLRIYRIGGGLLDSE-DVYGPG---WDGLIRKAVTFGRASVLLLNDLLRE---EPLPDVVHFHDWHTVFAGALIKKY 141 (437)
T ss_dssp EETTEEEEEEESSGGGCS-CTTCSH---HHHHHHHHHHHHHHHHHHHHHHTTS---SCCCSEEEEETGGGHHHHHHHHHH
T ss_pred ccCCeEEEecCccccccc-cccccc---hhhHHHHHHHHHHHHHHHHHHHHhc---CCCCCEEEECChhhhhHhhhhhcc
Confidence 778999999886543332 223221 1011222233443333333222111 126899999999988877776654
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
.++|+|+|+|+..... ++.......+.... ........++.+...+|.+++++.
T Consensus 142 -------~~~~~v~~~h~~~~~~-~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~d~v~~~~~ 195 (437)
T d2bisa1 142 -------FKIPAVFTIHRLNKSK-LPAFYFHEAGLSEL------------------APYPDIDPEHTGGYIADIVTTVSR 195 (437)
T ss_dssp -------HCCCEEEEESSCCCCC-EEHHHHHHTTCGGG------------------CCSSEECHHHHHHHHSSEEEESCH
T ss_pred -------ccCceeEEEeeccccc-cchhhhhhccchhh------------------hhHHHHHHHHHHHHhhhhhcccch
Confidence 4799999999874322 22222222221110 012234567788889999999998
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
....+. ...+.....++.+|+||+|.+.|.+.... ......+..+++.+++. +.+++
T Consensus 196 ~~~~~~---------~~~~~~~~~ki~vi~~g~d~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~---~~~~i 252 (437)
T d2bisa1 196 GYLIDE---------WGFFRNFEGKITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMD---EGVTF 252 (437)
T ss_dssp HHHHHT---------HHHHGGGTTTEEECCCCCCTTTSCGGGCC-----------SCHHHHHHHHHHHTTCC---SCEEE
T ss_pred hhhhhh---------hhhhccccCceEEEecccccccccccccc-----------hhhHHHHHhhhhhhhcc---CCceE
Confidence 776543 23345567789999999999887654321 12333456677778875 56889
Q ss_pred EEecccc-cccCHHHHHHHHHhhhc----CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCE
Q 008154 386 GFIGRLD-YQKGIDLIRLAAPEILA----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDI 459 (576)
Q Consensus 386 ~~~Gr~~-~~Kg~~~ll~a~~~L~~----~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv 459 (576)
+|+||+. .+||++.+++|+..+.. ++++|+|+|.+++..+...+.+.+... +...+.++ +.+.+..+++.+|+
T Consensus 253 ~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~adi 331 (437)
T d2bisa1 253 MFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDF 331 (437)
T ss_dssp EEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCT-TEEEECSCCCHHHHHHHHTTCSE
T ss_pred EEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccc-cceeccccCcHHHHHHHHhhhcc
Confidence 9999997 57999999999998754 479999999998666666666655444 33345554 56677789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHH
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSS 539 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~ 539 (576)
+++||..|++|++++|||+||+|||+|+.||..|++.+ ++|++++++|+++++++|.+++. .+++.
T Consensus 332 ~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-----------~~G~~~~~~d~~~la~~i~~ll~---~~~~~ 397 (437)
T d2bisa1 332 VIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-----------ETGILVKAGDPGELANAILKALE---LSRSD 397 (437)
T ss_dssp EEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-----------TTCEEECTTCHHHHHHHHHHHHT---TTTSC
T ss_pred ccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-----------CcEEEECCCCHHHHHHHHHHHHh---CCHHH
Confidence 99999999999999999999999999999999998875 68999999999999999999885 35667
Q ss_pred HHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 540 WEGLMRRG--MEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 540 ~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
+.++++++ .+++|||++++++|+++|++++.+.
T Consensus 398 ~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 398 LSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 432 (437)
T ss_dssp THHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhH
Confidence 77777776 3568999999999999999988653
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.1e-40 Score=359.82 Aligned_cols=472 Identities=15% Similarity=0.081 Sum_probs=310.3
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeec------
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCF------ 134 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~------ 134 (576)
.++||+|+++++++++++++|.+.+.+|..|.+|++.+.. .+.++. ...+.+.+.
T Consensus 110 LgnGGLG~LAgd~lkSaadLglP~vGvGLlY~~GyF~Q~i-~dG~Q~E~~d~w~~~~~P~~~~~~~~~~~v~~~g~v~~~ 188 (796)
T d1l5wa_ 110 LGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSF-VDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTKD 188 (796)
T ss_dssp CCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEE-ETTEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECTT
T ss_pred CCCchHHHHHHHHHHHHHhCCCCEEEEEcCcCCCCeEEEE-ECCEEEECCCCcccCCCceeeccccceEEEeeccEEeec
Confidence 6899999999999999999999999999999999665543 111111 111333322
Q ss_pred -----CCeeEEEEEEeeecC------eEEEEecC--C-CC-------------------CC--CCCCCCCCCCCCCchHH
Q 008154 135 -----GGEQEIAFFHEYREG------VDWVFVDH--P-SY-------------------HR--PGNPYGDINGAFGDNQF 179 (576)
Q Consensus 135 -----~~~~~~~~~~~~~~g------v~v~~l~~--~-~~-------------------~~--~~~~y~~~~~~~~~~~~ 179 (576)
++.+....|...+.| +++++.+. + .+ .+ +..+|++.. .+...+.
T Consensus 189 ~~w~~~~~V~a~~~d~~v~g~~~~~v~~LrLw~a~~~~~~~~~~~~~~d~~~~~~n~~~~r~IT~~LY~~D~-~~~gkel 267 (796)
T d1l5wa_ 189 GRWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDN-AFEGKKL 267 (796)
T ss_dssp SCEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSSCCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCCCS-SHHHHHH
T ss_pred CcccCceEEEEEeeeeeeecccCCceeEEEeeecccCccccccccccccHHHHHhchhhhhccceEeCCCCc-ccchHHH
Confidence 345666777777765 34444331 1 01 11 567898610 0001345
Q ss_pred HH---HHHHHHHHhhc-ccCCC--CCCC-CCCccEEEeCCCccchHHHHHHhhcc-----CCCCC---CCCcEEEEeecC
Q 008154 180 RY---TLLCYAACEAP-LVLPL--GGFT-YGEKCIFLVNDWHAGLVPVLLASKYR-----PHGVY---KDARSILVIHNL 244 (576)
Q Consensus 180 r~---~~~~~~~~~~~-~~~~~--~~~~-~~~pDVvH~~~~~~~~~~~~l~~~~~-----~~~~~---~~~~~v~t~H~~ 244 (576)
|+ ..++.++++.+ +.... ..+. ..+|+|||+||.|++++..-+.+... .+..+ .+..++||+||+
T Consensus 268 Rl~Qe~~l~~~g~~~l~r~~~~~~~~~~~~~~~~vihlNEgHpafai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTp 347 (796)
T d1l5wa_ 268 RLMQQYFQCACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTL 347 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCGGGHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCC
T ss_pred HHHHHHhhhhhHHHHHHHHHhhcCCChHHccchhhhhcccchHHHHHHHHHHHHHHhcCCCHHHHHHHhhceEEEeccCC
Confidence 55 34555544433 22211 0110 01489999999999988553332211 11111 234789999999
Q ss_pred CCCC--CCChhhhhh-cCCChhhhcccccccccccc-cccC----------CcCccchhHHHHHHhccceeccCccchhh
Q 008154 245 SHQG--VEPAATYKN-LGLPSEWYGALEWVFPTWAR-THAL----------DTGEAVNVLKGAIVTADRLLTVSKGYSWE 310 (576)
Q Consensus 245 ~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~~~~a~~~ad~v~~vS~~~~~~ 310 (576)
.+++ .||.++++. ++.....+......+....+ ..+. ...+.++|..+|++.|..+++||+.+.+-
T Consensus 348 vpag~e~fp~~li~~~l~~~~~~i~~i~~~fl~~~~~~~~~d~~~~~~~~~~~~~~~~Ma~LAl~~S~~vNGVSklH~ev 427 (796)
T d1l5wa_ 348 MPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDL 427 (796)
T ss_dssp SGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHH
T ss_pred chhhccccCHHHHHHHhHHHHHHHhHhhHHHHHHHHHHCCCcHHHHhhhchhcccccchHHHHHHhhhhhHHHHHHHHHH
Confidence 8776 788888743 32111111111001110000 0011 12457999999999999999999999876
Q ss_pred hccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCc---cccccCCcCCcccc------------------------
Q 008154 311 ITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDE---HIASHYSIDDLSGK------------------------ 363 (576)
Q Consensus 311 ~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~---~l~~~~~~~~~~~~------------------------ 363 (576)
+.+..+ +......+.++..|+|||+..+|...... .+++.+.++.|..+
T Consensus 428 ~~~~~~----~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k 503 (796)
T d1l5wa_ 428 VVKDLF----PEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIK 503 (796)
T ss_dssp HHHTTS----HHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHH
T ss_pred HHHHhh----hhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHHHHhccCCHHHHHHHHHHH
Confidence 544322 22234446689999999999999766443 45666666666421
Q ss_pred ----hHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhh----hc------CCcEEEEEeCCChhhHHHHH
Q 008154 364 ----VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEI----LA------DDIQFVMLGSGDPQFESWMR 429 (576)
Q Consensus 364 ----~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L----~~------~~~~lii~G~g~~~~~~~~~ 429 (576)
....+..++..|+..+++.++++|+.||.+||+.++++....++ +. .|+++||+|+++|.+...++
T Consensus 504 ~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~ 583 (796)
T d1l5wa_ 504 QANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKN 583 (796)
T ss_dssp HHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHH
Confidence 11223444566777779999999999999999999977665543 22 27999999999998877776
Q ss_pred HHHH------H--------hcCceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeCcccccc
Q 008154 430 DTEA------T--------YKDKYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRD 493 (576)
Q Consensus 430 ~~~~------~--------~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~~gg~~e 493 (576)
.++. . ...+++++++|+..+++.++++||||+++|+ +|++|++.|+||.+|.+++++.+|||.|
T Consensus 584 iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE 663 (796)
T d1l5wa_ 584 IIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVE 663 (796)
T ss_dssp HHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHH
T ss_pred HHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHH
Confidence 6642 1 1237999999999999999999999999998 7999999999999999999999999999
Q ss_pred ccccccccccCCCCCcceeEeCCC------------CHHHHHH-------HHH---------------------------
Q 008154 494 TVENFNPFAREGSGEGTGWSFLPL------------SEESMLT-------ALR--------------------------- 527 (576)
Q Consensus 494 ~i~~~~~~~~~~~~~~~G~~~~~~------------d~~~la~-------~i~--------------------------- 527 (576)
+.+.. +++|||+|... |+.++.+ ++.
T Consensus 664 ~~~~v--------g~eN~f~fG~~~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~l~~~~~ 735 (796)
T d1l5wa_ 664 IAEKV--------GEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGG 735 (796)
T ss_dssp HHHHH--------CGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCTTTTHHHHHHTSTTTC
T ss_pred HHHhc--------CccceEEecCchHHHHHHHhcCCChHHHhhcCHHHHHHHHHhhcCCCCCCChHHHHHHHHHHhhcCC
Confidence 98641 15899999542 2222221 111
Q ss_pred ----------------HHHHHhhhCHHHHHHHHHHHHh--hhCCHHHHHHHHHHH
Q 008154 528 ----------------FAIRTYREHKSSWEGLMRRGME--KDYTWENAAIQYEQV 564 (576)
Q Consensus 528 ----------------~~l~~~~~~~~~~~~~~~~a~~--~~fs~~~~~~~y~~~ 564 (576)
+.+...+.|+..|.+|+..+++ -.||.++|+++|.+-
T Consensus 736 D~y~~~~df~~y~~~q~~v~~~Y~d~~~W~~~~~~nia~~g~FssdR~i~eYa~~ 790 (796)
T d1l5wa_ 736 DPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQAR 790 (796)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCGGGBHHHHHHHHHHH
T ss_pred ChhhhhccHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhCCCCcChHHHHHHHHHH
Confidence 1122223569999999998864 379999999999863
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=9.4e-38 Score=336.63 Aligned_cols=465 Identities=14% Similarity=0.120 Sum_probs=301.4
Q ss_pred ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------c---------------
Q 008154 80 KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------G--------------- 126 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~--------------- 126 (576)
..||+|++++++.++++++|.+.+.+|..|..|++.|..- +.++. .
T Consensus 121 GnGGLGrLAgd~LkSaAdLglP~~G~GL~Y~~GyF~Q~I~-dG~Q~E~~d~w~~~~~Pwe~~r~~~~~~v~f~g~v~~~~ 199 (824)
T d2gj4a1 121 GNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC-GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTS 199 (824)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEE-TTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECS
T ss_pred CCccHHHHHHHHHHHHHhCCCCeEEEEcCcCCCCeEEEEE-CCeEEEcCCccccCCCCceeecccceeEEecCceeeecC
Confidence 3799999999999999999999999999999996654332 11111 0
Q ss_pred -------------eeEEEeecCC----eeEEEEEEee-----------ecCeEEEEec-----CCCCCC--CCCCCCCCC
Q 008154 127 -------------CCMKICCFGG----EQEIAFFHEY-----------REGVDWVFVD-----HPSYHR--PGNPYGDIN 171 (576)
Q Consensus 127 -------------~~~~~~~~~~----~~~~~~~~~~-----------~~gv~v~~l~-----~~~~~~--~~~~y~~~~ 171 (576)
..+.++++|. ...+|+|... +++++.++++ +....+ +..+|++
T Consensus 200 ~~~~w~~~~~V~avpydv~i~g~~~~~vn~lRlW~a~~~~~f~~~~~~~G~~~~~lld~~~~eni~~~ly~~d~ly~G-- 277 (824)
T d2gj4a1 200 QGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEG-- 277 (824)
T ss_dssp SSEEEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEECCC----------CHHHHHHTHHHHHGGGSBCCCCSSCCCC--
T ss_pred ccccccCceEEEEEeeeeEEeeccCceeEEEEEEeeccCccccccccccCcHHHHHHhhcchhcchhccCCcccccCc--
Confidence 1112223321 2345666543 2334444443 222112 4556764
Q ss_pred CCCCchHHHH---HHHHHHH-HhhcccCCCCC----------CC-CCCccEEEeCCCccchHHHHHHhhcc-CCC----C
Q 008154 172 GAFGDNQFRY---TLLCYAA-CEAPLVLPLGG----------FT-YGEKCIFLVNDWHAGLVPVLLASKYR-PHG----V 231 (576)
Q Consensus 172 ~~~~~~~~r~---~~~~~~~-~~~~~~~~~~~----------~~-~~~pDVvH~~~~~~~~~~~~l~~~~~-~~~----~ 231 (576)
++.|+ .+++.++ ..++++++... +. -.+|++||+||.|++++..-+.+... ..+ .
T Consensus 278 -----~~lRl~Qqy~l~~~g~~~ilr~~~~~~~~~~~~~~~~~~~~~~~~vihlNegHpa~ai~ElmR~l~d~~gl~~d~ 352 (824)
T d2gj4a1 278 -----KELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDK 352 (824)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHH
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhccccceeeccCCccHhHHHHHHHHHHHhcCCCHHH
Confidence 35555 3444433 33333332111 00 01467999999999988553333221 111 1
Q ss_pred CC---CCcEEEEeecCCCCC--CCChhhhhh-cCCCh--------hhhccccccc----cccccc--ccCCcCccchhHH
Q 008154 232 YK---DARSILVIHNLSHQG--VEPAATYKN-LGLPS--------EWYGALEWVF----PTWART--HALDTGEAVNVLK 291 (576)
Q Consensus 232 ~~---~~~~v~t~H~~~~~~--~~~~~~~~~-~~~~~--------~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~ 291 (576)
+. ...++||+||+.+++ .||.++++. ++... .++......+ ..+.++ ........++|..
T Consensus 353 A~e~v~~~~~fTtHTpvpag~E~f~~~l~~~~lpr~~~ii~ei~~~fl~~~~~~~~~d~~~~~~l~ii~e~~~~~~~Ma~ 432 (824)
T d2gj4a1 353 AWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAH 432 (824)
T ss_dssp HHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHH
T ss_pred HHHHhhceEEEEeccCchHhcCccCHHHHHHHhHHHhhhhhhhHHHHHHHHHHHCCCcHHHHhhcccccccCCceeeHHH
Confidence 11 136899999998776 788887743 21100 0000000000 000000 1112345799999
Q ss_pred HHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccc---cccCCcCCcccc-----
Q 008154 292 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHI---ASHYSIDDLSGK----- 363 (576)
Q Consensus 292 ~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l---~~~~~~~~~~~~----- 363 (576)
+|++.|..+++||+.+.+-+++.. ++..+...+.++..|+|||+...|.....+.+ .+.+.+++|..+
T Consensus 433 Lal~~S~~vNGVSklH~ev~~~~~----~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~ 508 (824)
T d2gj4a1 433 LCIAGSHAVNGVARIHSEILKKTI----FKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLR 508 (824)
T ss_dssp HHHHTCSCEEESSHHHHHHHHHTT----THHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGG
T ss_pred HHHHhchhHHHHHHHHHHHHHHhh----ccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHH
Confidence 999999999999999886654321 34455566778999999999999987554333 334444444211
Q ss_pred -------------------hHhH----HHHHHHcCCCCCCCCCEEEEecccccccCHHHHHH----HHHhhhc------C
Q 008154 364 -------------------VQCK----IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRL----AAPEILA------D 410 (576)
Q Consensus 364 -------------------~~~~----~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~----a~~~L~~------~ 410 (576)
..++ +.+++..|+..+++.++++++.||.+||+..+.+. .+.+|++ .
T Consensus 509 ~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~ 588 (824)
T d2gj4a1 509 KLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVV 588 (824)
T ss_dssp GGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCC
T ss_pred HHHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCC
Confidence 1122 33455567777799999999999999999999443 3456554 3
Q ss_pred CcEEEEEeCCChhhHHHHHHHHH--------------HhcCceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHH
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEA--------------TYKDKYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQL 474 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~l 474 (576)
|+++||+|+++|.+...++.++. ....+++++++|+..+++.++++||||++.|+ .|++|++.|
T Consensus 589 P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgM 668 (824)
T d2gj4a1 589 PRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 668 (824)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHH
T ss_pred CeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchh
Confidence 89999999999988877776652 11237899999999999999999999999998 799999999
Q ss_pred HHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCC------------CHHHHHHHHH---HH----------
Q 008154 475 YAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPL------------SEESMLTALR---FA---------- 529 (576)
Q Consensus 475 EAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~------------d~~~la~~i~---~~---------- 529 (576)
+||.+|.++++|.+|||.|+.+.. +++|||.|... |+.++.+... ++
T Consensus 669 K~alNGal~lstlDGwnvEi~~~v--------g~~N~~~fG~~~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~~~~~ 740 (824)
T d2gj4a1 669 KFMLNGALTIGTMDGANVEMAEEA--------GEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFS 740 (824)
T ss_dssp HHHHTTCEEEECSCTTHHHHHHHH--------CGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTC
T ss_pred HHHHcCCeeeccccchHHHHHHhc--------CcccEEEeCCChhhhhHHhhcCCCHHHHHhhCHHHHHHHHHhccccCC
Confidence 999999999999999999988742 15799999642 3333322211 11
Q ss_pred -----------------------------------HHHhhhCHHHHHHHHHHHHh--hhCCHHHHHHHHHHH
Q 008154 530 -----------------------------------IRTYREHKSSWEGLMRRGME--KDYTWENAAIQYEQV 564 (576)
Q Consensus 530 -----------------------------------l~~~~~~~~~~~~~~~~a~~--~~fs~~~~~~~y~~~ 564 (576)
+...+.|+..|.++++.+++ -.||.++|+++|.+-
T Consensus 741 ~~~~~~f~~l~~~l~~~D~y~v~~Df~~y~~~q~~v~~~Y~d~~~W~~~~~~nia~~g~FssdR~i~eY~~~ 812 (824)
T d2gj4a1 741 PKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYARE 812 (824)
T ss_dssp TTSTTTTHHHHHHHHHCCTTCTGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCGGGBHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHhcCChhhhhccHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcCCCcChHHHHHHHHHH
Confidence 11223469999999999964 389999999999864
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7e-34 Score=289.63 Aligned_cols=228 Identities=14% Similarity=0.128 Sum_probs=173.8
Q ss_pred hccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcC
Q 008154 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 375 (576)
Q Consensus 296 ~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 375 (576)
.++.++++++...+++. ........++.+++||+|.+.+.+.... ..++.++..++
T Consensus 135 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~vi~~gv~~~~~~~~~~~---------------~~~~~~r~~~~ 190 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQ---------KHYQTEPERFQILPPGIYPDRKYSEQIP---------------NSREIYRQKNG 190 (370)
T ss_dssp CCCEEEESCHHHHHHHH---------HHHCCCGGGEEECCCCCCGGGSGGGSCT---------------THHHHHHHHTT
T ss_pred cCceEEEecHHHHHHHH---------HhcCCCcceEEEEEeecccccccccCch---------------hhhhhhhhccC
Confidence 56778888887766543 2334566789999999997655433221 23677888899
Q ss_pred CCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHH
Q 008154 376 LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHR 452 (576)
Q Consensus 376 i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 452 (576)
++ ++.++++++||+.+.||++.+++|+++|.+ ++..+.++|.++. .+...+.+.+. ...++.+. +...+ +..
T Consensus 191 ~~--~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~-~~~~~~~~~~~~~~~~v~~~-g~~~~-~~~ 265 (370)
T d2iw1a1 191 IK--EQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDK-PRKFEALAEKLGVRSNVHFF-SGRND-VSE 265 (370)
T ss_dssp CC--TTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC-CHHHHHHHHHHTCGGGEEEE-SCCSC-HHH
T ss_pred CC--ccceEEEEEeccccccchhhhcccccccccccccceeeecccccc-cccccccccccccccccccc-ccccc-ccc
Confidence 88 678899999999999999999999999866 4566666666542 23333333332 23455444 44433 557
Q ss_pred HHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe-CCCCHHHHHHHHHHHHH
Q 008154 453 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF-LPLSEESMLTALRFAIR 531 (576)
Q Consensus 453 ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~-~~~d~~~la~~i~~~l~ 531 (576)
+|+.||++|+||.+|+||++++|||+||+|||+|+.||++|.+.+ +.+|+++ +++|+++++++|.+++.
T Consensus 266 ~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~----------~~~G~l~~~~~d~~~la~~i~~ll~ 335 (370)
T d2iw1a1 266 LMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIAD----------ANCGTVIAEPFSQEQLNEVLRKALT 335 (370)
T ss_dssp HHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHH----------HTCEEEECSSCCHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccceeeecccCCeeEEEeCCCChHHHhcC----------CCceEEEcCCCCHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999998 8899766 67899999999999986
Q ss_pred HhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 532 TYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
|++.+.+|++++ .++.|+|.++.+++.++|+
T Consensus 336 ----d~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 336 ----QSPLRMAWAENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp ----CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHHHhChhHHHHHHHHHHh
Confidence 899999999887 3456666666666666654
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.93 E-value=3.1e-25 Score=205.69 Aligned_cols=188 Identities=29% Similarity=0.481 Sum_probs=152.8
Q ss_pred CCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccc-cccCHHHHHHHHHhhhc----CC
Q 008154 337 GIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEILA----DD 411 (576)
Q Consensus 337 Gvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~----~~ 411 (576)
|||++.|.+.... ..+...+..+++++|++ +..+++|+||+. ++||++.+++|++.|.+ ++
T Consensus 1 gid~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~---~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~ 66 (196)
T d2bfwa1 1 GIDCSFWNESYLT-----------GSRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE 66 (196)
T ss_dssp CCCTTTSSGGGSC-----------SCHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG
T ss_pred CcChhhcCCCCCC-----------chhHHHHHHHHHHhCCC---CCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCC
Confidence 7888888655321 23445567888999997 678899999997 58999999999999864 47
Q ss_pred cEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc
Q 008154 412 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 412 ~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
++|+|+|+|++..+...+.+.+...... .+.++ +.+.+..+|+.||++|+||+.|++|++++|||+||+|||+++.|+
T Consensus 67 ~~l~i~G~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~ 145 (196)
T d2bfwa1 67 MRFIIIGKGDPELEGWARSLEEKHGNVK-VITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG 145 (196)
T ss_dssp EEEEEECCBCHHHHHHHHHHHHHCTTEE-EECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH
T ss_pred eEEEEEeecccchhhhhhhhhhccceeE-EeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCc
Confidence 9999999998777777777766654333 34444 666778999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCC
Q 008154 491 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYT 553 (576)
Q Consensus 491 ~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs 553 (576)
..|++.+ .+|++++++|+++++++|.+++. .+++.+.++++++. +.+||
T Consensus 146 ~~e~i~~-----------~~g~~~~~~~~~~l~~~i~~~l~---~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 146 LRDIITN-----------ETGILVKAGDPGELANAILKALE---LSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HHHHCCT-----------TTCEEECTTCHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHTC
T ss_pred cceeecC-----------CceeeECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHhCC
Confidence 9998865 69999999999999999999886 36777888877763 34454
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=7.3e-23 Score=213.65 Aligned_cols=293 Identities=15% Similarity=0.082 Sum_probs=195.5
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcccccccccccccccCCc
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
-|+||+|++|..++|.+++++. ++++++|++|.+ ||.. .++.+...
T Consensus 123 ~d~iwvhDyhl~llp~~lR~~~------~~~~i~~flH~p-----fP~~~~fr~lp~~---------------------- 169 (456)
T d1uqta_ 123 DDIIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIP-----FPTPEIFNALPTY---------------------- 169 (456)
T ss_dssp TCEEEEESGGGTTHHHHHHHTT------CCSCEEEECCSC-----CCCHHHHTTSTTH----------------------
T ss_pred CCeEEEeccchhhhHHHHHHhC------CCCcEEEEeCCC-----CCChHHhccCcch----------------------
Confidence 3899999999999999999876 789999999987 3322 22222211
Q ss_pred CccchhHHHHHHhccceeccCccchhhhcccc---CC-----cchhhhhhccCCceeEecCCCCCCCCCCCCCccccccC
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVE---GG-----YGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHY 355 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~---~~-----~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~ 355 (576)
.....++..+|.+...+..+.+.....- .+ ..... +.....++.++|+|||.+.|......
T Consensus 170 ----~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~-~~gr~v~v~~~p~GID~~~~~~~~~~------ 238 (456)
T d1uqta_ 170 ----DTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT-AWGKAFRTEVYPIGIEPKEIAKQAAG------ 238 (456)
T ss_dssp ----HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEE-ETTEEEEEEECCCCCCHHHHHHHHHS------
T ss_pred ----HHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEE-ecCceeeeeeecCcccchhhhhhccc------
Confidence 1122233445555554444332221100 00 00000 01123468899999998766421110
Q ss_pred CcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCCh----hhH
Q 008154 356 SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDP----QFE 425 (576)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~~----~~~ 425 (576)
........++... .+..+|+++||+++.||++.+++|++++.+ ..+.++++|.+.. .+.
T Consensus 239 ------~~~~~~~~l~~~~-----~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~ 307 (456)
T d1uqta_ 239 ------PLPPKLAQLKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQ 307 (456)
T ss_dssp ------CCCHHHHHHHHHT-----TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHH
T ss_pred ------HHHHHHHHHHHhc-----CCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHH
Confidence 0011123333333 267899999999999999999999999865 2577888876531 222
Q ss_pred HHHHHHHH-------Hh-----cCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCc-----eEEeCc
Q 008154 426 SWMRDTEA-------TY-----KDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI-----PVVHAT 488 (576)
Q Consensus 426 ~~~~~~~~-------~~-----~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~p-----vIat~~ 488 (576)
+...++.+ .. ...+......+.+....+++.||+++.||..|+||++++||||||+| +|+|+.
T Consensus 308 ~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~ 387 (456)
T d1uqta_ 308 DIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 387 (456)
T ss_dssp HHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETT
T ss_pred HHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCC
Confidence 22222221 11 12233334456677778999999999999999999999999999998 899999
Q ss_pred cccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 489 GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 489 gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
+|..+.+. +|++++|.|++++|++|.+++. .+++++.++++++ ...+|++...++.+++.++
T Consensus 388 ~G~~~~l~-------------~g~lVnP~d~~~~A~ai~~aL~---~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~ 451 (456)
T d1uqta_ 388 AGAANELT-------------SALIVNPYDRDEVAAALDRALT---MSLAERISRHAEMLDVIVKNDINHWQECFISDLK 451 (456)
T ss_dssp BGGGGTCT-------------TSEEECTTCHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCHHHhC-------------CeEEECcCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 99999874 3889999999999999999986 2456666666665 2357999999999988887
Q ss_pred Hh
Q 008154 567 WA 568 (576)
Q Consensus 567 ~~ 568 (576)
++
T Consensus 452 ~~ 453 (456)
T d1uqta_ 452 QI 453 (456)
T ss_dssp HS
T ss_pred hh
Confidence 64
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.83 E-value=3.9e-20 Score=166.03 Aligned_cols=136 Identities=20% Similarity=0.228 Sum_probs=115.5
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCC--hhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD--PQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
..++|+||+.++||++.+++|++++ ++.+++|+|.+. +..+...+.+.+....++.++...+.+....+|+.||++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l--~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 90 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGL 90 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh--cCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccc
Confidence 3477999999999999999999988 467889999764 334555566665555676665444677788999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
|+||..|++|++++|||++|+|+|+++.++..|.+.+ +.+|+++++ |+++++++|.+++.
T Consensus 91 i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~----------~~~g~~~~~-d~~~~~~~i~~l~~ 150 (166)
T d2f9fa1 91 LCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVIN----------EKTGYLVNA-DVNEIIDAMKKVSK 150 (166)
T ss_dssp EECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCB----------TTTEEEECS-CHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccceeecCCcceeeecC----------CcccccCCC-CHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988 889998754 89999999999986
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.58 E-value=9.5e-07 Score=87.87 Aligned_cols=66 Identities=21% Similarity=0.142 Sum_probs=50.5
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc--------cccccccccccccCCCCCcceeEeCCCC--HHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG--------LRDTVENFNPFAREGSGEGTGWSFLPLS--EES 521 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg--------~~e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~ 521 (576)
.++..+|++|..+ -..|++|||++|+|+|+....+ +.+.+.+ .+.|+.++..+ +++
T Consensus 282 ~ll~~a~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~----------~G~g~~l~~~~~~~~~ 347 (391)
T d1pn3a_ 282 ELFGRVAAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAE----------LGVGVAVDGPVPTIDS 347 (391)
T ss_dssp HHHTTSSCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHH----------HTSEEEECCSSCCHHH
T ss_pred HHHhhccEEEecC----chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHH----------CCCEEEcCcCCCCHHH
Confidence 5789999999774 3468999999999999976543 2344544 56788887654 788
Q ss_pred HHHHHHHHHH
Q 008154 522 MLTALRFAIR 531 (576)
Q Consensus 522 la~~i~~~l~ 531 (576)
++++|++++.
T Consensus 348 l~~~i~~~l~ 357 (391)
T d1pn3a_ 348 LSAALDTALA 357 (391)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHhC
Confidence 9999988863
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.58 E-value=2.2e-06 Score=85.43 Aligned_cols=125 Identities=14% Similarity=0.035 Sum_probs=74.4
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
..++++.|........+..-.++..+...+..++++....... ......++. +.++-+ ...++..+|++|
T Consensus 238 ~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~-~~~~~p--~~~ll~~~~~~I 307 (401)
T d1rrva_ 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV-------LPDDRDDCF-AIDEVN--FQALFRRVAAVI 307 (401)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC-------CSCCCTTEE-EESSCC--HHHHGGGSSEEE
T ss_pred CeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEEeccccccc-------cccCCCCEE-EEeccC--cHHHhhhccEEE
Confidence 3555666665543322333333333333344444444332110 012234554 444433 225789999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHH
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAI 530 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l 530 (576)
. .+-..|++||+++|+|+|+....+ +.+.+.+ .+.|..++.. +++.++++|++++
T Consensus 308 ~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~----------~G~g~~l~~~~~~~~~L~~ai~~vl 368 (401)
T d1rrva_ 308 H----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA----------LGIGVAHDGPTPTFESLSAALTTVL 368 (401)
T ss_dssp E----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH----------HTSEEECSSSCCCHHHHHHHHHHHT
T ss_pred e----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHH----------CCCEEEcCcCCCCHHHHHHHHHHHh
Confidence 5 466789999999999999976654 4455555 5678888765 4888999998886
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.54 E-value=3.5e-06 Score=82.47 Aligned_cols=160 Identities=9% Similarity=-0.036 Sum_probs=85.8
Q ss_pred CCCEEEE-ecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGF-IGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~-~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
+...++. .|......-.+.+.+.+..+... ...++.+.... ..............++. ..+|.++ ...+++.||+
T Consensus 176 ~~~~i~~~~gs~g~~~~~~~~~~~~~~l~~~-~~~i~~~~~~~-~~~~~~~~~~~~~~~~~-v~~f~~~-~~~lm~~adl 251 (351)
T d1f0ka_ 176 GPVRVLVVGGSQGARILNQTMPQVAAKLGDS-VTIWHQSGKGS-QQSVEQAYAEAGQPQHK-VTEFIDD-MAAAYAWADV 251 (351)
T ss_dssp SSEEEEEECTTTCCHHHHHHHHHHHHHHGGG-EEEEEECCTTC-HHHHHHHHHHTTCTTSE-EESCCSC-HHHHHHHCSE
T ss_pred CCcccccccccchhhhhHHHHHHhhhhhccc-ceeeeeccccc-hhhhhhhhcccccccce-eeeehhh-HHHHHHhCch
Confidence 3444444 44544333345555666665432 33444444332 22222222222333332 3445444 3478999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCccc-------cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHH
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG-------LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAI 530 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg-------~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l 530 (576)
+|-- +=+.|+.||+++|+|+|...... ..+.+.+ .+.|+.++.. +.+. +.+++
T Consensus 252 ~It~----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~----------~G~~~~~~~~~~~~e~----l~~~l 313 (351)
T d1f0ka_ 252 VVCR----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEK----------AGAAKIIEQPQLSVDA----VANTL 313 (351)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHH----------TTSEEECCGGGCCHHH----HHHHH
T ss_pred hhcc----ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHH----------CCCEEEechhhCCHHH----HHHHH
Confidence 9854 34589999999999999865321 1233333 4567776533 3454 44444
Q ss_pred HHhhhCHHHHHHHHHHHHh--hhCCHHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRRGME--KDYTWENAAIQYEQV 564 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a~~--~~fs~~~~~~~y~~~ 564 (576)
..+ +++.+.+|++++.+ ..-.++++++..+++
T Consensus 314 ~~l--~~~~~~~~~~~~~~~~~~~~a~~i~~~i~~l 347 (351)
T d1f0ka_ 314 AGW--SRETLLTMAERARAASIPDATERVANEVSRV 347 (351)
T ss_dssp HTC--CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHH
T ss_pred Hhh--CHHHHHHHHHHHHccCCccHHHHHHHHHHHH
Confidence 432 56667777776532 233466666666554
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.22 E-value=4.2e-05 Score=75.49 Aligned_cols=121 Identities=14% Similarity=0.061 Sum_probs=73.1
Q ss_pred CEEEEecccc-cccCHHHHHHHHHhhhcCCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 383 PLIGFIGRLD-YQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 383 ~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
.++.+.|... ..+..+.++++++.+ +..++++ |..+... .....++. ..++-+. ..++..+|++
T Consensus 240 ~i~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~~--------~~~~~nv~-~~~~~p~--~~~l~~~~~~ 305 (401)
T d1iira_ 240 PVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLVL--------PDDGADCF-AIGEVNH--QVLFGRVAAV 305 (401)
T ss_dssp CEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCCC--------SSCGGGEE-ECSSCCH--HHHGGGSSEE
T ss_pred eEEEccCccccchHHHHHHHHHHHHc---CCeEEEeccCCcccc--------ccCCCCEE-EEeccCH--HHHHhhcCEE
Confidence 4444445443 455556666666665 3334443 3322110 01223443 4555332 2578999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIR 531 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~ 531 (576)
|. .+-+.|++||+++|+|+|+....+ +.+.+.+ .+.|+.++.. ++++++++|.++++
T Consensus 306 V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~----------~G~g~~l~~~~~~~~~l~~ai~~~l~ 368 (401)
T d1iira_ 306 IH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE----------LGVGVAHDGPIPTFDSLSAALATALT 368 (401)
T ss_dssp EE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------HTSEEECSSSSCCHHHHHHHHHHHTS
T ss_pred Ee----cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHH----------CCCEEEcCcCCCCHHHHHHHHHHHhC
Confidence 94 477899999999999999965433 3444444 4678877665 58999999988873
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.54 E-value=0.033 Score=54.95 Aligned_cols=65 Identities=11% Similarity=-0.022 Sum_probs=45.8
Q ss_pred HHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc----ccccccc-ccccccccCCCCCcceeEeCCC--------CH
Q 008154 453 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTV-ENFNPFAREGSGEGTGWSFLPL--------SE 519 (576)
Q Consensus 453 ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~----gg~~e~i-~~~~~~~~~~~~~~~G~~~~~~--------d~ 519 (576)
.+..||++|.- +-..|++||+.+|+|.|+... ..+..-+ .. .+.|+.++.. ++
T Consensus 345 ~~p~~~~fItH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~----------~G~G~~l~~~~~~~~~~~t~ 410 (461)
T d2acva1 345 AHKAIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE----------WGVGLGLRVDYRKGSDVVAA 410 (461)
T ss_dssp HSTTEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT----------SCCEEESCSSCCTTCCCCCH
T ss_pred hcccCCEEEec----CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHH----------hCceEEeeccccccCCccCH
Confidence 45899999954 455789999999999999643 2233333 32 3567766432 57
Q ss_pred HHHHHHHHHHHH
Q 008154 520 ESMLTALRFAIR 531 (576)
Q Consensus 520 ~~la~~i~~~l~ 531 (576)
+++++++.+++.
T Consensus 411 ~~l~~a~~~vl~ 422 (461)
T d2acva1 411 EEIEKGLKDLMD 422 (461)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHhh
Confidence 889999998884
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=97.53 E-value=0.0069 Score=59.06 Aligned_cols=143 Identities=9% Similarity=-0.055 Sum_probs=94.1
Q ss_pred CCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcC
Q 008154 380 PDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 457 (576)
Q Consensus 380 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 457 (576)
.+...+++.-|-+..+....+++++..+.. .++.+++.....+.......... ....++..+........-.++..|
T Consensus 194 ~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~-~~~~n~~~~~~l~~~~~l~ll~~s 272 (373)
T d1v4va_ 194 EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVL-KGVRNFVLLDPLEYGSMAALMRAS 272 (373)
T ss_dssp SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHH-TTCTTEEEECCCCHHHHHHHHHTE
T ss_pred cccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhh-cccccceeeccchHHHHHHHhhhc
Confidence 355667777777766777778888877755 46777765544322222221111 222456666666665555788999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhC
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 536 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~ 536 (576)
++++-.| |....||.++|+|+|.. +.|...+.+.. |.+ .++ +.|.+++.+++..++. +
T Consensus 273 ~~vignS-----ssgi~Ea~~lg~P~Inir~~~eRqeg~~~----------g~n-vlv-~~d~~~I~~~i~~~l~----~ 331 (373)
T d1v4va_ 273 LLLVTDS-----GGLQEEGAALGVPVVVLRNVTERPEGLKA----------GIL-KLA-GTDPEGVYRVVKGLLE----N 331 (373)
T ss_dssp EEEEESC-----HHHHHHHHHTTCCEEECSSSCSCHHHHHH----------TSE-EEC-CSCHHHHHHHHHHHHT----C
T ss_pred eeEeccc-----chhhhcchhhcCcEEEeCCCccCHHHHhc----------Cee-EEc-CCCHHHHHHHHHHHHc----C
Confidence 9998554 66778999999999998 56888888765 434 444 4488988888877764 6
Q ss_pred HHHHHHHH
Q 008154 537 KSSWEGLM 544 (576)
Q Consensus 537 ~~~~~~~~ 544 (576)
+..+.++.
T Consensus 332 ~~~~~~~~ 339 (373)
T d1v4va_ 332 PEELSRMR 339 (373)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhcc
Confidence 66655543
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.27 E-value=0.043 Score=53.20 Aligned_cols=214 Identities=14% Similarity=0.044 Sum_probs=106.4
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCC-CCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITE-WNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
+.||..++.++...+.+.+ .+..++++.++-|. +|.-. ....... ..
T Consensus 142 kls~~hf~~t~~~~~~L~~----------~G~~~~~I~~vG~~~~D~i~~~~~~~~~---------------------~~ 190 (377)
T d1o6ca_ 142 AIADLHFAPTGQAKDNLLK----------ENKKADSIFVTGNTAIDALNTTVRDGYS---------------------HP 190 (377)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHCCSSCC---------------------CS
T ss_pred cceeEEeecchhhhhhhhh----------hccccceEeeccchhHHHHHHHHHHHHh---------------------hh
Confidence 5788888888887776642 24456677777764 33100 0000000 00
Q ss_pred HcCCCCCCCCCEEEEeccccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHH--HhcCceEEEccCCh
Q 008154 373 ELGLPIRPDCPLIGFIGRLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEA--TYKDKYRGWVGFNV 447 (576)
Q Consensus 373 ~~~i~~~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 447 (576)
..... ..+..++++.-|-+. .+.....+.++..+.. ..+.+++.....+. ....+.+ ....++..+.....
T Consensus 191 ~~~~~-~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~ni~~~~~l~~ 266 (377)
T d1o6ca_ 191 VLDQV-GEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPV---VREAAHKHFGDSDRVHLIEPLEV 266 (377)
T ss_dssp TTTTT-TTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----CH---HHHHHHHC--CCSSEEECCCCCH
T ss_pred hhhhc-cCCceEEEEeccccccccchHHHHHHHHhhcccccccccccccccccc---cchhhhhccccccceEeccccch
Confidence 00001 124455666666553 2333344444433322 35555544332211 1112222 12345665666555
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc-cccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
...-.++..|+++|--| |-...||-.+|+|+|.-.. +.+.+.+.. | +..+++. |.+++.+++
T Consensus 267 ~~fl~llk~s~~vIgnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~~----------g-~nilv~~-~~~~I~~~i 329 (377)
T d1o6ca_ 267 IDFHNFAAKSHFILTDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVEA----------G-TLKLAGT-DEENIYQLA 329 (377)
T ss_dssp HHHHHHHHHCSEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTT----------T-SSEEECS-CHHHHHHHH
T ss_pred HHHHHHHhhhheeeccc-----chhHHhhhhhhceEEEeCCCCcCcchhhc----------C-eeEECCC-CHHHHHHHH
Confidence 55567899999998544 4457899999999998754 556676654 4 4455554 788888888
Q ss_pred HHHHHHhhhCHHHHHHHHHHHHhhhC----CHHHHHHHHHHHHH
Q 008154 527 RFAIRTYREHKSSWEGLMRRGMEKDY----TWENAAIQYEQVFE 566 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a~~~~f----s~~~~~~~y~~~y~ 566 (576)
..++. ++..+..+.+. ...| +.+++++.+...+.
T Consensus 330 ~~~l~----~~~~~~~~~~~--~npYGdG~as~rI~~~L~~~~~ 367 (377)
T d1o6ca_ 330 KQLLT----DPDEYKKMSQA--SNPYGDGEASRRIVEELLFHYG 367 (377)
T ss_dssp HHHHH----CHHHHHHHHHC--CCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHh----ChHHHhhhccC--CCCCCCChHHHHHHHHHHHhhC
Confidence 87765 55555544221 2223 34556655554443
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.20 E-value=0.021 Score=56.44 Aligned_cols=130 Identities=6% Similarity=-0.096 Sum_probs=72.3
Q ss_pred CCEEEEecccccc--cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--hcC
Q 008154 382 CPLIGFIGRLDYQ--KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGC 457 (576)
Q Consensus 382 ~~~i~~~Gr~~~~--Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~ 457 (576)
..+.+..|.+... .-...++++++.+ +.++++...+.. ....-.........++....-.+.. .++ ..+
T Consensus 266 ~~v~~s~gs~~~~~~~~~~~~~~~~~~~---~~~vl~~~~~~~-~~~l~~~~~~~~~~nv~~~~~~pq~---~lL~hp~~ 338 (450)
T d2c1xa1 266 SVVYISFGTVTTPPPAEVVALSEALEAS---RVPFIWSLRDKA-RVHLPEGFLEKTRGYGMVVPWAPQA---EVLAHEAV 338 (450)
T ss_dssp CEEEEECCSSCCCCHHHHHHHHHHHHHH---TCCEEEECCGGG-GGGSCTTHHHHHTTTEEEESCCCHH---HHHTSTTE
T ss_pred ceeeecccccccCCHHHHHHHHHHHHhc---CCeEEEEECCCc-cccCChhhhhhccccccccccCChH---hhhccCce
Confidence 3455555655422 2234455555554 556666544321 1111111112334455444322332 355 677
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHH
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIR 531 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~ 531 (576)
|++|.- +-..+.+||+.+|+|.|+....+ +..-+.+ ..+.|..++.+ +.+++.++|.+++.
T Consensus 339 ~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~---------~~G~G~~l~~~~~t~~~l~~ai~~vL~ 405 (450)
T d2c1xa1 339 GAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVED---------VLEIGVRIEGGVFTKSGLMSCFDQILS 405 (450)
T ss_dssp EEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH---------TSCCEEECGGGSCCHHHHHHHHHHHHH
T ss_pred eEEEcc----CCccHHHHHHHcCCCEEecccccchHHHHHHHHH---------HcCcEEEecCCCcCHHHHHHHHHHHhc
Confidence 888754 55678999999999999976542 2222222 03677777654 67889999999886
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.027 Score=54.62 Aligned_cols=133 Identities=15% Similarity=0.031 Sum_probs=80.9
Q ss_pred CCCEEEEecccc-cccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcC
Q 008154 381 DCPLIGFIGRLD-YQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 457 (576)
+.+++++.=|-+ ..+....++.++..+.. .++.+++--...+.......... ....++..+..........++..|
T Consensus 205 ~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~-~~~~ni~~~~~l~~~~fl~ll~~a 283 (376)
T d1f6da_ 205 KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRIL-GHVKNVILIDPQEYLPFVWLMNHA 283 (376)
T ss_dssp SEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHH-TTCTTEEEECCCCHHHHHHHHHHC
T ss_pred CceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhh-cccccceeeccccHHHHHHHHhhc
Confidence 334455444444 45667777888877754 45666555433222222222111 223456656655555555789999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCc-cccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
++++-.| |--..||-.+|+|+|.-.. ..+++.+.. .+...++ .|.+++.+++.+++.
T Consensus 284 ~~vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~~~~-----------g~~i~v~-~~~~~I~~ai~~~l~ 341 (376)
T d1f6da_ 284 WLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA-----------GTVRLVG-TDKQRIVEEVTRLLK 341 (376)
T ss_dssp SEEEESS-----SGGGGTGGGGTCCEEECSSCCSCHHHHHH-----------TSEEECC-SSHHHHHHHHHHHHH
T ss_pred eEEEecC-----cchHhhHHHhCCCEEEcCCCccCccceec-----------CeeEECC-CCHHHHHHHHHHHHh
Confidence 9999765 3455699999999997533 345566654 3555554 488888888888875
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.17 E-value=0.65 Score=45.10 Aligned_cols=110 Identities=6% Similarity=-0.092 Sum_probs=62.5
Q ss_pred EEEccCChhHHHHHH--hcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeE
Q 008154 440 RGWVGFNVPISHRIT--AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWS 513 (576)
Q Consensus 440 ~~~~~~~~~~~~~ll--~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~ 513 (576)
+.+.++-+.. .+| ..++++|.- +=..|.+||+.+|+|.|+...- .+...+.+ .-+.|+.
T Consensus 336 v~~~~w~Pq~--~lL~hp~~~~fVtH----GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e---------~lG~Gv~ 400 (471)
T d2vcha1 336 FVIPFWAPQA--QVLAHPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSE---------DIRAALR 400 (471)
T ss_dssp EEEESCCCHH--HHHHSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH---------TTCCEEC
T ss_pred eeecccCCHH--HHhcCccCCEEEec----CCccHHHHHHHcCCCEEEcccccccHHHHHHHHH---------HheeEEE
Confidence 3455553322 467 478888853 4557899999999999996532 22222211 0234554
Q ss_pred eCCC-----CHHHHHHHHHHHHHH-----hhhCHHHHHHHHHHHHhh----hCCHHHHHHHHHHH
Q 008154 514 FLPL-----SEESMLTALRFAIRT-----YREHKSSWEGLMRRGMEK----DYTWENAAIQYEQV 564 (576)
Q Consensus 514 ~~~~-----d~~~la~~i~~~l~~-----~~~~~~~~~~~~~~a~~~----~fs~~~~~~~y~~~ 564 (576)
.... +.+++.++|.+++.+ +.++-.++.+++++|+++ .-+.+.|++++.+.
T Consensus 401 l~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~gG~s~~~~~~~~~~~~~~ 465 (471)
T d2vcha1 401 PRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAH 465 (471)
T ss_dssp CCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHH
T ss_pred EecCCCCcCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Confidence 4322 678899999998853 222333444444444322 33356666666543
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=92.51 E-value=0.68 Score=44.89 Aligned_cols=130 Identities=8% Similarity=-0.114 Sum_probs=71.5
Q ss_pred CEEEEeccccc--ccCHHHHHHHHHhhhcCCcEEEEEeCCCh---hhHHHHHHHHHHhcCceEEEccCChhHHHHHH--h
Q 008154 383 PLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDP---QFESWMRDTEATYKDKYRGWVGFNVPISHRIT--A 455 (576)
Q Consensus 383 ~~i~~~Gr~~~--~Kg~~~ll~a~~~L~~~~~~lii~G~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~ 455 (576)
.++++.|.... ..-...++++++.+ +.+++++-.... .....-.........++....-.+.. .++ .
T Consensus 290 ~v~~~~gs~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~Pq~---~lL~hp 363 (473)
T d2pq6a1 290 VVYVNFGSTTVMTPEQLLEFAWGLANC---KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD---KVLNHP 363 (473)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHHHHHT---TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHH---HHHTST
T ss_pred eeeeccCccccccHHHHHHHHHHHHhc---CCeEEEEEccCCcccccccCcccchhhccCceEEeeeCCHH---HHhcCC
Confidence 34455555442 22334555666555 455555432211 11111122223344566433322332 366 5
Q ss_pred cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeCCC-CHHHHHHHHHHHH
Q 008154 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLPL-SEESMLTALRFAI 530 (576)
Q Consensus 456 ~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~~~-d~~~la~~i~~~l 530 (576)
.+++||.- +=..|..||+.+|+|.|+.... .+..-+.+ ..+.|..++.. +.++++++|.+++
T Consensus 364 ~~~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~---------~~G~G~~l~~~~t~~~l~~ai~~vl 430 (473)
T d2pq6a1 364 SIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICN---------EWEIGMEIDTNVKREELAKLINEVI 430 (473)
T ss_dssp TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH---------TSCCEEECCSSCCHHHHHHHHHHHH
T ss_pred cCcEEEec----CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHH---------HcCeEEeeCCCcCHHHHHHHHHHHH
Confidence 88888854 4567899999999999996542 22222322 13567776643 6889999999888
Q ss_pred H
Q 008154 531 R 531 (576)
Q Consensus 531 ~ 531 (576)
.
T Consensus 431 ~ 431 (473)
T d2pq6a1 431 A 431 (473)
T ss_dssp T
T ss_pred c
Confidence 6
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=87.54 E-value=9.1 Score=34.85 Aligned_cols=120 Identities=18% Similarity=0.182 Sum_probs=73.1
Q ss_pred HHHHHHHcCCCCCCCCCEEEEe-c-ccccccC--HHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHH----hcCc
Q 008154 367 KIALQKELGLPIRPDCPLIGFI-G-RLDYQKG--IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEAT----YKDK 438 (576)
Q Consensus 367 ~~~~~~~~~i~~~~~~~~i~~~-G-r~~~~Kg--~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~----~~~~ 438 (576)
+.......++. .+...|++. | +-.+.|. .+.+.+.+++|.+++.+++++|... ..+..+.+.+. ....
T Consensus 167 ~~~~~~~~~~~--~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~--e~~~~~~~~~~~~~~~~~~ 242 (348)
T d1pswa_ 167 KSYTCNQFSLS--SERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAW 242 (348)
T ss_dssp HHHHHHHTTCC--SSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTT
T ss_pred HHHHHHHhccc--cCCCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccc--hHHHHHHHHHhhhcccccc
Confidence 44556666665 345554443 3 3334566 4557888888877788899988653 34444444332 1234
Q ss_pred eEEEcc-CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcccccccc
Q 008154 439 YRGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTV 495 (576)
Q Consensus 439 ~~~~~~-~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i 495 (576)
+.-+.+ .+-.+...+++.||++|-+.. | .+--|.++|+|+|+--.+..++..
T Consensus 243 ~~~l~g~~sl~el~~li~~a~l~I~~Dt----g-~~HlAaa~g~p~i~lfg~~~~~~~ 295 (348)
T d1pswa_ 243 CRNLAGETQLDQAVILIAACKAIVTNDS----G-LMHVAAALNRPLVALYGPSSPDFT 295 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEESS----H-HHHHHHHTTCCEEEEESSSCTTSS
T ss_pred cccccCCccHHHHHHHHhcceeEeecCc----c-HHHHHHHcCCCEEEEECCCCHhhh
Confidence 444443 255566689999999998752 3 345699999999995433333333
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=86.70 E-value=6.6 Score=32.22 Aligned_cols=110 Identities=16% Similarity=0.221 Sum_probs=61.1
Q ss_pred EEEEecccccc---cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEE----------------cc
Q 008154 384 LIGFIGRLDYQ---KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW----------------VG 444 (576)
Q Consensus 384 ~i~~~Gr~~~~---Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~----------------~~ 444 (576)
+++++|.-... +-.++..+.-+.|.+.+. .++-|.+. ..-+....-.....+++++. ..
T Consensus 6 v~~~~~~~~~~p~~~~~~~a~~lG~~la~~g~-~V~~GG~~-GlM~ava~ga~~~gg~viGilP~~~~~n~~~~~~i~~~ 83 (170)
T d1rcua_ 6 VVGYSGPVNKSPVSELRDICLELGRTLAKKGY-LVFNGGRD-GVMELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTG 83 (170)
T ss_dssp EEECCSCTTSTTTGGGHHHHHHHHHHHHHTTC-EEEECCSS-HHHHHHHHHHHHTTCCEEEEESTTCCCCTTCSEEEECC
T ss_pred EEEEecCCCCCcchHHHHHHHHHHHHHHHCCC-EEECCCcc-CHHHHHHHHHHhcCCccccccchhhccCcccceeEEec
Confidence 55566554432 344555555566666676 55555443 32222222222222333322 22
Q ss_pred CCh-hHHHHHHhcCCEEEeCCCCCCCcHH--HHHHHHcCCceEEeC-cccccccccc
Q 008154 445 FNV-PISHRITAGCDILLMPSRFEPCGLN--QLYAMRYGTIPVVHA-TGGLRDTVEN 497 (576)
Q Consensus 445 ~~~-~~~~~ll~~~Dv~v~ps~~E~~g~s--~lEAma~G~pvIat~-~gg~~e~i~~ 497 (576)
.+. +-...++..+|++|..+ -++|+- ++||+..++|+|.-+ .|.|.+++.+
T Consensus 84 ~~~~~Rk~~m~~~sda~I~lP--GG~GTl~El~~a~~l~KPiilln~~g~w~~~i~~ 138 (170)
T d1rcua_ 84 LDFQMRSFVLLRNADVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQ 138 (170)
T ss_dssp CCHHHHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGG
T ss_pred cchhhhHHHHhhcccceeeec--cccchHHHHHHHHHhCCceEEecCCCchHHHHHH
Confidence 222 22235679999999765 356654 478999999999875 5677777654
|