Citrus Sinensis ID: 008228


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570---
MILMKFMVEIFTVFLNCITFTGTGDWCLNAMSTYVILYETPRYGACHFSLSFWNSSKKAKIPLKEPKWIDELHQKQPLNDLDAVILAMNSATASKMVFERHVGSSRSFTKFSIICRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCGQILFWPILLQDNDLRSQSCVEYAEKAALHKHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLDFANDPTNELLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSCHSNSVNSPEIVSLDKISSPSKNSLHQENISGRSHVLVSILHSNFLTIGQIVIPHYRQVFTRVSRSYFARSAYGVLTGKRISSTLGTKLPSTMPWMLIPYKEYWCLCRNSILACMPKCECHLFQ
cHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccEEEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHcccccccccccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccc
ccHHHHHHHHHHHHHHHEEEccccEEEEccccEEEEEEEccccccccEEccccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccEEEEEEEccccccccccEEEEccccccHHHHHcccccccccHHHHHHHHHccccHHEEEcHcHccccccccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEccc
MILMKFMVEIFTVFLNCITFTGTGDWCLNAMSTYVILYetprygachfslsfwnsskkakiplkepkwidelhqkqplnDLDAVILAMNSATASKMVFErhvgssrsftKFSIICRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCgqilfwpillqdndlrsQSCVEYAEKAALHKHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLDfandptnelLRTGCVWlmgvpagfklNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRgrkwnplrqrldsyeYTVKQHIVGSllftplllllptTSVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSchsnsvnspeivsldkisspsknslhqenisGRSHVLVSILHsnfltigqiviphYRQVFTRVSRSYFARSAYGVLtgkrisstlgtklpstmpwmlipykEYWCLCRnsilacmpkcechlfq
MILMKFMVEIFTVFLNCITFTGTGDWCLNAMSTYVILYETPRYGACHFSLSFWNSSKKAKIPLKEPKWIDELHQKQPLNDLDAVILAMNSATASKMVFERHVGSSRSFTKFSIICRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCGQILFWPILLQDNDLRSQSCVEYAEKAALHKHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLDFANDPTNELLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSCHSNSVNSPEIVSLDKISSPSKNSLHQENISGRSHVLVSILHSNFLTIGQIVIPHYRQVFTRVSRSYFARsaygvltgkrisstlgtklpstmpwMLIPYKEYWCLCRNSILACMPKCECHLFQ
MILMKFMVEIFTVFLNCITFTGTGDWCLNAMSTYVILYETPRYGACHFSLSFWNSSKKAKIPLKEPKWIDELHQKQPLNDLDAVILAMNSATASKMVFERHVGSSRSFTKFSIICRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCGQILFWPILLQDNDLRSQSCVEYAEKAALHKHSMWSSLAVDlllgnligfsllfnAESVCLWVLDFANDPTNELLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSllftplllllpttSVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSCHSNSVNSPEIVSLDKISSPSKNSLHQENISGRSHVLVSILHSNFLTIGQIVIPHYRQVFTRVSRSYFARSAYGVLTGKRISSTLGTKLPSTMPWMLIPYKEYWCLCRNSILACMPKCECHLFQ
*ILMKFMVEIFTVFLNCITFTGTGDWCLNAMSTYVILYETPRYGACHFSLSFWNSSKKAKIPLKEPKWIDELHQKQPLNDLDAVILAMNSATASKMVFERHVGSSRSFTKFSIICRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCGQILFWPILLQDNDLRSQSCVEYAEKAALHKHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLDFANDPTNELLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSCHSN*****************************SHVLVSILHSNFLTIGQIVIPHYRQVFTRVSRSYFARSAYGVLTGKRISSTLGTKLPSTMPWMLIPYKEYWCLCRNSILACMPKCECHLF*
*ILMKFMVEIFTVFLNCITFTGTGDWCLNAMSTYVILYETPRYGACH*********************************LDAVILAMNSATASKMV*************FSIICRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCGQILFWPILLQDNDLRSQSCVEYAEKAALHKHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLDFANDPTNELLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSCHSNSVNSPEIVSLDKISSP******************SILHSNFLTIGQIVIPHYRQVFTRVSRSYFARSAYGVLTGKRISSTL*TKLPSTMPWMLIPYKEYWCLCRNSILACMPKCECH***
MILMKFMVEIFTVFLNCITFTGTGDWCLNAMSTYVILYETPRYGACHFSLSFWNSSKKAKIPLKEPKWIDELHQKQPLNDLDAVILAMNSATASKMVFERHVGSSRSFTKFSIICRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCGQILFWPILLQDNDLRSQSCVEYAEKAALHKHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLDFANDPTNELLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSCHSNSVNSPEIVSLDK***********ENISGRSHVLVSILHSNFLTIGQIVIPHYRQVFTRVSRSYFARSAYGVLTGKRISSTLGTKLPSTMPWMLIPYKEYWCLCRNSILACMPKCECHLFQ
MILMKFMVEIFTVFLNCITFTGTGDWCLNAMSTYVILYETPRYGACHFSLSFWNSSKKAKIPLKEPKWIDELHQKQPLNDLDAVILAMNSATASKMVFERHVGSSRSFTKFSIICRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCGQILFWPILLQDNDLRSQSCVEYAEKAALHKHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLDFANDPTNELLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSCHSNSVNSPEIVSLDKISSPSKNSLHQENISGRSHVLVSILHSNFLTIGQIVIPHYRQVFTRVSRSYFARSAYGVLTGKRISSTLGTKLPSTMPWMLIPYKEYWCLCRNSILACMPKCECHLFQ
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MILMKFMVEIFTVFLNCITFTGTGDWCLNAMSTYVILYETPRYGACHFSLSFWNSSKKAKIPLKEPKWIDELHQKQPLNDLDAVILAMNSATASKMVFERHVGSSRSFTKFSIICRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCGQILFWPILLQDNDLRSQSCVEYAEKAALHKHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLDFANDPTNELLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSCHSNSVNSPEIVSLDKISSPSKNSLHQENISGRSHVLVSILHSNFLTIGQIVIPHYRQVFTRVSRSYFARSAYGVLTGKRISSTLGTKLPSTMPWMLIPYKEYWCLCRNSILACMPKCECHLFQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query573 2.2.26 [Sep-21-2011]
Q9QYT7581 Phosphatidylinositol N-ac yes no 0.359 0.354 0.352 2e-29
O14357653 N-acetylglucosaminyl-phos yes no 0.483 0.424 0.292 6e-28
Q9BRB3 760 Phosphatidylinositol N-ac no no 0.413 0.311 0.333 2e-23
P53306609 Phosphatidylinositol N-ac yes no 0.504 0.474 0.281 3e-16
>sp|Q9QYT7|PIGQ_MOUSE Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q OS=Mus musculus GN=Pigq PE=2 SV=3 Back     alignment and function desciption
 Score =  130 bits (328), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 1/207 (0%)

Query: 243 DPTNELLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGL 302
           D   E L+    WLMG PAG K+N  L  VLG   L  I +W +    +   +  ++  +
Sbjct: 314 DRVAEELQHLLQWLMGAPAGLKMNRALDQVLGRFFLYHIHLWISYIHLMSPFIEHILWHV 373

Query: 303 AILGILFGMTVPAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPL 362
            +   L G+TV  ++  D+I ++  H+   +   + LY  +I  L++LWRLFRG+KWN L
Sbjct: 374 GLSACL-GLTVALSIFSDIIALLTFHIYCFYVYGARLYCLKIYGLSSLWRLFRGKKWNVL 432

Query: 363 RQRLDSYEYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFTMMNTSISLICMLIEVIISIIH 422
           RQR+DS  Y + Q  +G+LLFT L+ LLPTT+++Y+ FT++   +  +  LI +++ +I+
Sbjct: 433 RQRVDSCSYDLDQLFIGTLLFTILVFLLPTTALYYLVFTLLRLLVITVQGLIHLLVDLIN 492

Query: 423 ATPYIKIVLWLVRRRRFPAGIWFEIVS 449
           + P   + L L R  R  AG+ F ++ 
Sbjct: 493 SLPLYSLGLRLCRPYRLAAGVKFRVLE 519




Part of the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 9EC: 8
>sp|O14357|GPI1_SCHPO N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi1 PE=2 SV=1 Back     alignment and function description
>sp|Q9BRB3|PIGQ_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q OS=Homo sapiens GN=PIGQ PE=1 SV=3 Back     alignment and function description
>sp|P53306|GPI1_YEAST Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query573
224090033527 predicted protein [Populus trichocarpa] 0.914 0.994 0.678 0.0
297739888616 unnamed protein product [Vitis vinifera] 0.947 0.881 0.634 0.0
225441337 731 PREDICTED: uncharacterized protein LOC10 0.945 0.741 0.629 0.0
147782753 749 hypothetical protein VITISV_027128 [Viti 0.945 0.723 0.611 0.0
255578449 755 phosphatidylinositol N-acetylglucosaminy 0.904 0.686 0.655 0.0
357509561 718 Phosphatidylinositol N-acetylglucosaminy 0.931 0.743 0.604 1e-177
356504746 715 PREDICTED: uncharacterized protein LOC10 0.921 0.738 0.605 1e-176
356568216 715 PREDICTED: uncharacterized protein LOC10 0.921 0.738 0.603 1e-175
449466310 701 PREDICTED: uncharacterized protein LOC10 0.958 0.783 0.583 1e-167
297820506 676 hypothetical protein ARALYDRAFT_324227 [ 0.944 0.800 0.565 1e-165
>gi|224090033|ref|XP_002308913.1| predicted protein [Populus trichocarpa] gi|222854889|gb|EEE92436.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/532 (67%), Positives = 429/532 (80%), Gaps = 8/532 (1%)

Query: 35  VILYETPRYGACHFSLSFWNSSKKAKIPLKEPKWIDELHQKQPLNDLDAVILAMNSATAS 94
           V++YE P YG  HFSL+ W SSK  K P+K+PKW++EL + QPL DLD VILA+NSA A+
Sbjct: 1   VVVYEIPVYGVHHFSLNLWKSSKPVKDPVKKPKWVNELEKNQPLLDLDTVILAINSAAAA 60

Query: 95  KMVFERHVGSSRSFTKFSII-CRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQS 153
           K+  E  VG  RS + F II  R IA +WQ+LA+ +A++ST+FYI LQ  H+  SFGS++
Sbjct: 61  KLALETRVGFKRSVSGFFIIISRSIAFMWQVLAIFVATISTLFYIVLQLFHNFSSFGSKT 120

Query: 154 WIYTASKRLFNTTWINIQIRCGQILFWPILLQDNDLRSQSCVEYAEKAALHKHSMWSSLA 213
            IYT S R+F TTW  IQIRC QIL+WPI+LQDN LRSQSCVEY E A LH++SMWSSLA
Sbjct: 121 RIYTTSARVFCTTWTQIQIRCCQILYWPIVLQDNGLRSQSCVEYKENAVLHRNSMWSSLA 180

Query: 214 VDLLLGNLIGFSLLFNAESVCLWVLDFANDPTNELLRTGCVWLMGVPAGFKLNTELAGVL 273
           VDLLLGNL+G +LL +AESVC W+L FAN  TNELLR+G VWLMGVPAGFKLNTELAGVL
Sbjct: 181 VDLLLGNLMGLALLIHAESVCQWILTFANVITNELLRSGSVWLMGVPAGFKLNTELAGVL 240

Query: 274 GMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVVVMLHVSTLH 333
           GMISLNAIQIWSTLW F+  L    +KGLA+LGILFG T+PAAL+ DM  +  LHVSTLH
Sbjct: 241 GMISLNAIQIWSTLWIFIGFLFIYFIKGLALLGILFGATIPAALIIDMASIATLHVSTLH 300

Query: 334 WMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSLLFTPLLLLLPTT 393
           W ISLLYS QIQALAALWRLFRGRKWNPLRQRLDSY+YTVKQHIVGSLLFTPLLLLLPTT
Sbjct: 301 WAISLLYSWQIQALAALWRLFRGRKWNPLRQRLDSYDYTVKQHIVGSLLFTPLLLLLPTT 360

Query: 394 SVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSCHSN 453
           SVFY+FFT+++T+I+L C+LIEV IS+IH+TPYIKI LWL+RRRRFP+GIWFEI SC ++
Sbjct: 361 SVFYMFFTILSTTIALSCILIEVTISMIHSTPYIKIFLWLMRRRRFPSGIWFEIASCQND 420

Query: 454 SVNSPEIVSLDKISSPSKNSLHQENISG--RSHVLVSILHSNFLTIGQIVIPHYRQVFTR 511
           S+   E    DK+ S SK S ++ N  G  R  ++VS LHSNFL+IGQ+V+PHYR+VF+ 
Sbjct: 421 SL---EFARHDKVCSSSKKS-YRNNDRGENRPSIMVSFLHSNFLSIGQVVLPHYRKVFSG 476

Query: 512 VSRSYFARSAYGVLTGKRISSTLGTKLPSTMPWMLIPYKEYWCLCRNSILAC 563
           VS  +   SA+G LTGKR  STLGT LPSTMPW+ IP +EYWC CRNS+LAC
Sbjct: 477 VS-DFAITSAHGALTGKRTVSTLGTCLPSTMPWLSIPAREYWCFCRNSVLAC 527




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297739888|emb|CBI30070.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225441337|ref|XP_002274541.1| PREDICTED: uncharacterized protein LOC100260688 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147782753|emb|CAN70572.1| hypothetical protein VITISV_027128 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255578449|ref|XP_002530089.1| phosphatidylinositol N-acetylglucosaminyltransferase, putative [Ricinus communis] gi|223530400|gb|EEF32288.1| phosphatidylinositol N-acetylglucosaminyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357509561|ref|XP_003625069.1| Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI1 [Medicago truncatula] gi|87241443|gb|ABD33301.1| N-acetylglucosaminyl transferase component [Medicago truncatula] gi|355500084|gb|AES81287.1| Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356504746|ref|XP_003521156.1| PREDICTED: uncharacterized protein LOC100793897 [Glycine max] Back     alignment and taxonomy information
>gi|356568216|ref|XP_003552309.1| PREDICTED: uncharacterized protein LOC100805383 [Glycine max] Back     alignment and taxonomy information
>gi|449466310|ref|XP_004150869.1| PREDICTED: uncharacterized protein LOC101216602 [Cucumis sativus] Back     alignment and taxonomy information
>gi|297820506|ref|XP_002878136.1| hypothetical protein ARALYDRAFT_324227 [Arabidopsis lyrata subsp. lyrata] gi|297323974|gb|EFH54395.1| hypothetical protein ARALYDRAFT_324227 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query573
TAIR|locus:2080655560 AT3G57170 [Arabidopsis thalian 0.947 0.969 0.527 7.2e-155
UNIPROTKB|H7C336238 PIGQ "Phosphatidylinositol N-a 0.324 0.781 0.319 2.1e-23
UNIPROTKB|E1BVN7573 PIGQ "Uncharacterized protein" 0.361 0.361 0.306 2.5e-23
UNIPROTKB|E1B721639 E1B721 "Uncharacterized protei 0.336 0.302 0.309 7.1e-23
UNIPROTKB|F1PDA9438 PIGQ "Uncharacterized protein" 0.336 0.440 0.298 8.6e-23
UNIPROTKB|F1RGT9581 PIGQ "Uncharacterized protein" 0.361 0.356 0.301 9.2e-23
MGI|MGI:1333114581 Pigq "phosphatidylinositol gly 0.336 0.332 0.309 1.2e-22
RGD|1359535581 Pigq "phosphatidylinositol gly 0.336 0.332 0.309 1.2e-22
POMBASE|SPBC30D10.11653 gpi1 "pig-Q" [Schizosaccharomy 0.650 0.571 0.249 3.6e-21
UNIPROTKB|E7ERP4574 PIGQ "Phosphatidylinositol N-a 0.324 0.324 0.319 4.3e-21
TAIR|locus:2080655 AT3G57170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1510 (536.6 bits), Expect = 7.2e-155, P = 7.2e-155
 Identities = 290/550 (52%), Positives = 386/550 (70%)

Query:    15 LNCITFTGTGDWCLNAMSTYVILYETPRYGACHFSLSFWNSSKKAKIPLKEPKWIDELHQ 74
             L+CI +TG G   LNAMSTYVI+Y+TP +G+ HFSLSF NSS + K PLK+PKW+D+LH 
Sbjct:    15 LDCIIYTGMGILYLNAMSTYVIVYDTPVFGSHHFSLSFSNSSPQTKAPLKKPKWVDDLHN 74

Query:    75 KQPLNDLDAVILAMNSATASKMVFER-HVGSSRSFTKFSIICRLIALVWQLLAVSMASLS 133
             ++PLN+++ VIL++N A A+K+ +++       S   FSI   + +L W+LLA  + SLS
Sbjct:    75 RKPLNEMETVILSLNCAAAAKIAYKKISTQLETSSQNFSISYLISSLTWRLLATILGSLS 134

Query:   134 TIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCGQILFWPILLQDNDLRSQS 193
             +++Y   QF + L SF   SW++ AS+R+   TWIN +IR  QIL+WPI L++ D+ S S
Sbjct:   135 SLYYSLAQFFYLLSSFLIFSWVHIASRRVLKNTWINFRIRSCQILYWPIFLEEIDMMSIS 194

Query:   194 CVEYAEKAALHKHSMWSSLAVDXXXXXXXXXXXXXXAESVCLWVLDFANDPTNELLRTGC 253
             CV++AE+AAL +HS WS++AVD               ESVC +V DFA + TN +LR+G 
Sbjct:   195 CVKHAEEAALQRHSTWSAMAVDLVLGNLIGLGLLFNTESVCSFVFDFAKEFTNGILRSGS 254

Query:   254 VWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTV 313
             VWLMGVPAGFKLNTELAGVLGM+SLN IQIWSTLW F+ S +  L++ +AILGI FG TV
Sbjct:   255 VWLMGVPAGFKLNTELAGVLGMVSLNVIQIWSTLWVFMASFIFCLIRVIAILGITFGATV 314

Query:   314 PAALVRDMIVVVMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTV 373
              AA V D+I    LH+  LHW I+L+YS QIQALAALWRLFRGRK NPLRQR+DSY YTV
Sbjct:   315 SAAFVIDVITFATLHIMALHWAITLVYSHQIQALAALWRLFRGRKLNPLRQRMDSYGYTV 374

Query:   374 KQHIVGSXXXXXXXXXXXXXSVFYIFFTMMNTSISLICMLIEVIISIIHATPYIKIVLWL 433
             KQH+VGS             SVFYIFFT+ +T+I+ ICMLIE  IS+IHATPY ++++WL
Sbjct:   375 KQHVVGSLLFTPLLLLLPTTSVFYIFFTITSTTINSICMLIEFAISVIHATPYAEVMIWL 434

Query:   434 VRRRRFPAGIWFEIVSCHSNSVNSPEIVSLDKISSPSKNSLHQENISGRSHVLVSILHSN 493
             VRR+RFP G+WFE+  C  + + S +    D     SK+ L +     ++ ++VS L SN
Sbjct:   435 VRRKRFPCGVWFEMEHCGEHILKSNDAFE-D-----SKSLLEEHGTPEKNSLMVSNLRSN 488

Query:   494 FLTIGQIVIPHYRQVFTRVSRSYFARSAYGVLTGKRISSTLGTKLPSTMPWMLIPYKEYW 553
             FLT+GQI++PHY+ +F+ +S S    SA GVL+GKR+ S LG  LP   PW+ +P ++YW
Sbjct:   489 FLTLGQILLPHYKTIFSGISASSLTTSARGVLSGKRMPSKLGLDLPPPRPWLHMPLRQYW 548

Query:   554 CLCRNSILAC 563
              LC NSI +C
Sbjct:   549 MLCHNSISSC 558




GO:0005739 "mitochondrion" evidence=ISM
GO:0006506 "GPI anchor biosynthetic process" evidence=IEA;ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0017176 "phosphatidylinositol N-acetylglucosaminyltransferase activity" evidence=IEA
UNIPROTKB|H7C336 PIGQ "Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BVN7 PIGQ "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1B721 E1B721 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PDA9 PIGQ "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RGT9 PIGQ "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1333114 Pigq "phosphatidylinositol glycan anchor biosynthesis, class Q" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1359535 Pigq "phosphatidylinositol glycan anchor biosynthesis, class Q" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
POMBASE|SPBC30D10.11 gpi1 "pig-Q" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|E7ERP4 PIGQ "Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.198LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.VI.918.1
hypothetical protein (527 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XII.204.1
hypothetical protein (249 aa)
       0.930
gw1.IV.1202.1
hypothetical protein (226 aa)
       0.800
grail3.0001027901
hypothetical protein (209 aa)
       0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query573
pfam05024189 pfam05024, Gpi1, N-acetylglucosaminyl transferase 5e-56
>gnl|CDD|218388 pfam05024, Gpi1, N-acetylglucosaminyl transferase component (Gpi1) Back     alignment and domain information
 Score =  186 bits (474), Expect = 5e-56
 Identities = 81/189 (42%), Positives = 114/189 (60%), Gaps = 1/189 (0%)

Query: 205 KHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLDFANDPTNELLRTGCVWLMGVPAGFK 264
            +S  S L +D+ LG L+G  LLFN E +  +  D       + LR+   WLMG PAG K
Sbjct: 2   LYSTISLLIIDIALGILLGLILLFNVEHLVSFSEDITKFYVIDNLRSILTWLMGNPAGLK 61

Query: 265 LNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLVKGLAILGILFGMTVPAALVRDMIVV 324
           LNTEL   LG   L  I++WST W F+   +++L + +A  G+L G +   ALV D I +
Sbjct: 62  LNTELNNFLGWFFLYHIELWSTFWDFIRPFISTLFRFIAYSGLL-GFSFFIALVIDFISI 120

Query: 325 VMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSLLFT 384
           V LH+   +     LY+ Q++ L +LW+LFRG+KWN LR R+DS  Y + Q ++G++LFT
Sbjct: 121 VTLHIHCFYLYSKKLYNLQLKGLTSLWQLFRGKKWNVLRNRIDSNYYDLDQLLLGTILFT 180

Query: 385 PLLLLLPTT 393
            LL LLPT 
Sbjct: 181 ILLFLLPTI 189


Glycosylphosphatidylinositol (GPI) represents an important anchoring molecule for cell surface proteins.The first step in its synthesis is the transfer of N-acetylglucosamine (GlcNAc) from UDP-N-acetylglucosamine to phosphatidylinositol (PI). This chemically simple step is genetically complex because three or four genes are required in both yeast (GPI1, GPI2 and GPI3) and mammals (GPI1, PIG A, PIG H and PIG C), respectively. Length = 189

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 573
KOG1183623 consensus N-acetylglucosaminyltransferase complex, 100.0
PF05024189 Gpi1: N-acetylglucosaminyl transferase component ( 100.0
KOG1183623 consensus N-acetylglucosaminyltransferase complex, 94.56
>KOG1183 consensus N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
Probab=100.00  E-value=4.8e-102  Score=823.32  Aligned_cols=506  Identities=38%  Similarity=0.599  Sum_probs=454.3

Q ss_pred             HhhhheeeccccccccCCcceEEEEeeCCCCCccccccCCCCCcchhcCCCCCchhHHHhhhcCCCCchHHHHHHhhhHH
Q 008228           13 VFLNCITFTGTGDWCLNAMSTYVILYETPRYGACHFSLSFWNSSKKAKIPLKEPKWIDELHQKQPLNDLDAVILAMNSAT   92 (573)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~vi~y~~P~~~~~~~sl~~~~~~~~~~~~~~k~~~v~~l~~~~~~~~l~~ii~~iN~~~   92 (573)
                      ..+|||+|+|+|....|+|+..++.+|+|..|.||+|+.+.++..+.+++.||+||+.+.++.+      ++..-.||++
T Consensus       110 i~l~~i~yhp~~p~~ln~msle~~~r~~l~~~~h~~sl~~~ns~pat~a~lkklk~vfdt~~rn------~vgl~ln~~a  183 (623)
T KOG1183|consen  110 IVLDCIIYHPMGPLYLNAMSLEVIVRDTLVFGSHHFSLSFSNSSPATKAPLKKLKWVFDTHNRN------TVGLSLNCAA  183 (623)
T ss_pred             eehhheeccCCCccceeeeeeehhHhhhhcccccccccChhhcChhhhhhhcCceeeccchhhh------hHHHHHhhhH
Confidence            4689999999999999999999999999999999999999999999999999999999999766      8888999999


Q ss_pred             HHHHHHhhhc-cCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchhhhhhhhhHhhhhHHH
Q 008228           93 ASKMVFERHV-GSSRSFTKFSIICRLIALVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQ  171 (573)
Q Consensus        93 ~~~~~~~k~~-~~krs~s~~t~~~~~~~~~~~~~~~~i~~v~~~~~ii~~~~~~~l~~~~~~~~~~~l~~i~~~t~qQid  171 (573)
                      +.+-++.++- ..|.+.-.+++.+.+.+.+|.+++.+...++...     ++...++++|.+|.|.++..+-  ..|++|
T Consensus       184 a~~vr~~~~~~~~k~~sylf~l~~riSslt~~llasll~~ls~ls-----~f~l~i~lrp~s~~y~~~~~v~--~~r~~~  256 (623)
T KOG1183|consen  184 AAKVRYKKISTQLKTSSYLFSLSYRISSLTWRLLASLLGSLSSLS-----FFYLLISLRPFSWVYIASRRVL--KNRWMD  256 (623)
T ss_pred             HhhhHHHHHhhhhhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHH-----HHHHHHhhchhHHHhHHhHHHH--HHHHHH
Confidence            9999888854 4566667799999999999999999999988776     4555667889999999997775  568999


Q ss_pred             HHhhcccchhhhcccc-cccccc-ch--hHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhhHHH
Q 008228          172 IRCGQILFWPILLQDN-DLRSQS-CV--EYAEKAALHKHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLDFANDPTNE  247 (573)
Q Consensus       172 lR~qQ~~ywPiq~~~~-~lrs~~-~~--~y~~~~~~~~nslWlsI~nDviLGi~lg~~L~~n~~~i~~~l~~~l~~~~~~  247 (573)
                      .|++|.+.||.+.... -.|+.+ ++  .|.++ -.+||.+|+ ++||.++|.++|.++.+|.+.+++..++++.+++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~r~s~~~~~~~~~~a-l~l~~~~wl-i~~d~~~G~~~~~~ll~n~~~v~sl~~~~~kef~~~  334 (623)
T KOG1183|consen  257 KRLKQVVLIRVLEAKILLVRKSSFVASLLLDVA-LQLYNTLWL-IANDNVFGWTVGAFLLENGHVVVSLNHDFAKEFTNG  334 (623)
T ss_pred             HHHhHhhhhhhhhhHHHHHHHhhhhHHHHHHHH-HHHHHHHHH-HhccHHHHHHhhhhhhccchhHHHhhhHHHHHHhhh
Confidence            9999999999997643 244432 32  33333 237999999 999999999999999999999999999999999999


Q ss_pred             HHHhhchhhccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH
Q 008228          248 LLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDS---LLASLVKGLAILGILFGMTVPAALVRDMIVV  324 (573)
Q Consensus       248 ~L~~~i~WLmg~PaGLKLN~eLa~fLg~lfL~~I~~W~~~~~~~~~---~l~~li~~l~~~g~l~G~S~~lAl~~Dli~l  324 (573)
                      .++++++||||+|||+|||+||++|||++|+|+|++|.+.+.+.-+   .+.+..+.++.++ ++|+|++.|+++|++++
T Consensus       335 ~lrs~~~WL~~~PAGlKLN~el~~~L~~~fl~vI~~Wst~~l~~~~~~~fl~~~~~~i~ls~-~~G~S~~~alv~Df~ai  413 (623)
T KOG1183|consen  335 ILRSTITWLMGNPAGLKLNTELAEVLGWFFLYVIYLWSTSMLFCLSKFPFLFHNFRFIALSL-IGGASVASALVIDFIAI  413 (623)
T ss_pred             hHHHHHHhhhcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999988887754   3444445666655 69999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccCCcccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 008228          325 VMLHVSTLHWMISLLYSQQIQALAALWRLFRGRKWNPLRQRLDSYEYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFTMMN  404 (573)
Q Consensus       325 ~TlHI~~fY~~sa~lY~~ql~~l~SL~~LFRGKK~NvLR~RiDs~~ydlDQLllGTLLFTiL~FLlPTv~vfYl~Fa~lr  404 (573)
                      +|+||||||.+++|+|++|++++.|||||||||||||||||+||+.||+||+++||+|||+|+||+|||+|||++|+++|
T Consensus       414 ~tlHI~~fy~~stkLY~~qi~~lasLw~LFRGKK~NvLRqRiDs~~ydldQl~lGTlLFtiLlFlLPTi~vfY~~FtllR  493 (623)
T KOG1183|consen  414 LTLHIYCFYAASTKLYYLQIYTLASLWRLFRGKKWNVLRQRIDSYIYDLDQLFLGTLLFTILLFLLPTIFVFYVVFTLLR  493 (623)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCcCCceEEEEEeecCCCCCCCCcccccccCCCCcccccccccccchh
Q 008228          405 TSISLICMLIEVIISIIHATPYIKIVLWLVRRRRFPAGIWFEIVSCHSNSVNSPEIVSLDKISSPSKNSLHQENISGRSH  484 (573)
Q Consensus       405 l~Ii~v~~lle~~i~~ln~fPlf~L~Lrlkdp~RlPgGI~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (573)
                      +.+..+++++|..++++||||+|++|+|+|||+|+|+|++||.+.+..+..++     .+..++|    .+.+.|+.+|-
T Consensus       494 ~~v~ai~~l~e~~ia~inhfPLfalmlrL~~pyR~P~Gv~fE~~~~~~~k~~~-----l~~q~nP----~k~ssMv~~yr  564 (623)
T KOG1183|consen  494 LLVSAIQTLIEFFIALINHFPLFALMLRLKRPYRLPAGVQFEALAEEKTKSQN-----LDAQENP----EKNSSMVSNYR  564 (623)
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHhccccCCCccchhhhhcccccccc-----hhhhhCC----chhhhHHHHHH
Confidence            99999999999999999999999999999999999999999998766555543     3344666    77889999999


Q ss_pred             HHHHHHhhcccccchhhchhhhhhhhhhhhhHHhhhhcceeccccccccccCCCCCCCccccchhHHHHhhhhh
Q 008228          485 VLVSILHSNFLTIGQIVIPHYRQVFTRVSRSYFARSAYGVLTGKRISSTLGTKLPSTMPWMLIPYKEYWCLCRN  558 (573)
Q Consensus       485 ~lvs~l~~ny~s~~~v~~p~~r~~f~~~~~~~~~~~a~g~~~g~r~~~~l~~~lp~~~~~~~~~~~~~~~~~~~  558 (573)
                      .+-++|++||+|+.++     +..          ..|.|+..|.|+|...|..+|-|.||.++|-+++|++|++
T Consensus       565 ll~~~l~t~y~s~st~-----~~~----------~~gc~v~~~~~~~ly~~ly~~lp~pwls~~dlqd~l~~q~  623 (623)
T KOG1183|consen  565 LLFLTLKTIYSSISTS-----SLT----------TSGCGVLSGKRMPLYLGLYLPLPRPWLSMPDLQDWLLCQN  623 (623)
T ss_pred             HHHHHHHHHhhhhhhh-----hhh----------hcCCCCCccchhhhHHhhccCCCCCcccchhHHHhhhccC
Confidence            9999999999999988     332          4589999999999999999999999999999999999985



>PF05024 Gpi1: N-acetylglucosaminyl transferase component (Gpi1); InterPro: IPR007720 Glycosylphosphatidylinositol (GPI) represents an important anchoring molecule for cell surface proteins Back     alignment and domain information
>KOG1183 consensus N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query573
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 57/402 (14%), Positives = 114/402 (28%), Gaps = 130/402 (32%)

Query: 22  GTGDWCL--NAMSTYVILYETPRYGACHFSLS-FWNSSKKAKIP---LK---------EP 66
           G+G   +  +   +Y +         C      FW + K    P   L+         +P
Sbjct: 160 GSGKTWVALDVCLSYKVQ--------CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211

Query: 67  KWIDELHQ----KQPLNDLDAV---ILAMNSATASKMVFERHVGSSRSFTKFSIICRLIA 119
            W          K  ++ + A    +L         +V   +V +++++  F++ C+++ 
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-LNVQNAKAWNAFNLSCKILL 270

Query: 120 LVWQLLAVSMASLSTIFYIFLQFLHSLLSFGSQSWIYTASKRLFNTTWINIQIRCGQILF 179
                      S +T  +I L   H  ++           K L    +++ +        
Sbjct: 271 TTRFKQVTDFLSAATTTHISLD--HHSMTLTP-----DEVKSLL-LKYLDCRP------- 315

Query: 180 WPILLQDNDLRSQSCVEYAEKAALHKHSMWSSLAVDLLLGNLIGFSLLFNAESVCLWVLD 239
                   DL  +                      +    ++I  S+    + +  W  D
Sbjct: 316 -------QDLPREVL------------------TTNPRRLSIIAESI---RDGLATW--D 345

Query: 240 FANDPTNELLRTGCVWLMGVPAGFKLNTELAGVLGMISLNAIQIWSTLWFFVDSLLASLV 299
                  +                KL T +       SLN ++       F    L+   
Sbjct: 346 NWKHVNCD----------------KLTTIIE-----SSLNVLEPAEYRKMFDR--LSVFP 382

Query: 300 KGLAI----LGILFGMTVPAALVRDMIVVVMLH------------VSTLHWMISLLYSQQ 343
               I    L +++   + +     M+VV  LH              ++   I L    +
Sbjct: 383 PSAHIPTILLSLIWFDVIKSD---VMVVVNKLHKYSLVEKQPKESTISIP-SIYLELKVK 438

Query: 344 IQALAALWRLFRGR--------KWNPLRQRLDSYEYTVKQHI 377
           ++   AL R               + +   LD Y Y    HI
Sbjct: 439 LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY---SHI 477


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00