Citrus Sinensis ID: 008286

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-
Protein Sequence
MAYYQRTFPPPPDSSLSETTSRRRTRGTELFFSLLLFIAFSFYFSSTLSGTDLRFLPAKRPHARNLISNVMKDDFQEVTRLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFSGVLPFTERTAFKCAMPNGARRPPLWQPILTKYPVKENPAKERELLRMKKLAYESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFGDAVKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMHQVQNRTLPSVAYYRPRQSHAQEPKSEICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQR
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccEEEEEEccccccccccccEEEEccccccccEEccccccccccEEEEcccccccccccccccccccccccccccHHHHccccEEEEEEEEccccEEEEEEcccccccccccccccEEEEEccccccccccccEEEEEccccccccccccccccEEEEEEEcccccccccccccccccccccccccccEEEEEEEEEcHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHcccccEEEEEEcccccEEccccccccccHHHHHHHHHHcccccEEEEEEEEEccccccccccccEEEcEEEcccccccccEEEEEEcccccccccccEEEEEcccccEEEEccccEEEEEEEccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEHHcccccccccHccccccccccccccccccHEEEccccEEEEEEccccccccccccEEEEcccccccccccccccccccEEEEccccccccccccccHHHcccccccccccccccccccHEEEEEEEccccEEEEEEcccccccccccccccEEEEEccccccHHHHHHHHHHccccccccccccccccccEEEEEEEccccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHccccEEEEEEcccEEEcccccccccHHHHHHHHHHccccccEEEEEEEEEcccccEccccccEEEEEEEcccccccccccEEEccHHHccccccccEEEEcccccccccccccEEEEEEEEEccHHHHHHHHHcccccEccccccccccccccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
mayyqrtfppppdsslsettsrrrtrGTELFFSLLLFIAFSFYFsstlsgtdlrflpakrphaRNLISNVMKDDFQEVTRLSrhvssvqdsakyqSVSVLLPDWEVLVLLspetsldsvEGFYCLFwnsqtsparfsgvlpftertafkcampngarrpplwqpiltkypvkenpaKERELLRMKKLAYESISTEDDVVLFVKGvnarsrsrspqpqdfmcvfgdavktpvtsctqevfrcshpeltaftsgtdqpiKMSLQIMHQVqnrtlpsvayyrprqshaqepkseiCVCTMVYNVAKFVKEWVIYHTKIGVEKFilydngseddLQNVVNelngdgynvtTLLWiwpktqeagfshnaihakhsckwmlyidvdefvyspswhdsgpskHLLKALIPQlhsigqvsircldfgpsgqkshpiegvtqgyncqrwdvsQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADwrdatnpnskdrtpglgfepikpqgwefefcnfTDDRLKLLTQRwfgqltpnggykmawqr
Flexible Loop (DISEMBL)
mayyqrtfppppdsslsettsrrRTRGTELFFSLLLFIAFSFYFSSTLSGTDLRFLPAKRPHARNLISNVMKDDFQEVTRLSrhvssvqdsakyqsVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFSGVLPFTERTAFKcampngarrpplwqpiltkypvkenpakeRELLRMKKLAyesisteddvVLFVKGVNarsrsrspqpqdfMCVFGDAVKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMHQVQNRTLPSVAYYRPRQshaqepkseicVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVadwrdatnpnskdrtpglgFEPIKPQGWEFEFCNFTDDRLKLLTQrwfgqltpnggykmawqr
Low Complexity Region (SEG)
MAYYQRTFPPPPDsslsettsrrrtrgtelffslllfiafsfyfssTLSGTDLRFLPAKRPHARNLISNVMKDDFQEVTRLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFSGVLPFTERTAFKCAMPNGARRPPLWQPILTKYPVKENPAKERELLRMKKLAYESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFGDAVKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMHQVQNRTLPSVAYYRPRQSHAQEPKSEICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQR
Disordered region (IsUnstruct)
***************************TELFFSLLLFIAFSFYFSSTLSGTDLRFLPAKRPHARNLISNVMKDDFQEVTRLS*HV*****SAKYQSVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFSGVLPFTERTAFKCAMPNGARRPPLWQPILTKYPVK********LLRMKKLAYESISTEDDVVLFVKGV************DFMCVFGDAVKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMHQVQNRTLPSVAYY************EICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSG**SHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRD************LGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTPNGGYKM****
Disordered Region (DISOPRED)
********P*********TTSRRRTRGTELFFSLLLFIAFSFYFSSTLSGTDLRFLPAKRPHARN****************************YQSVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFSGVLPFTERTAFKCAMPNGARR************************RMKKLAYESISTEDDVVLFVKGVNAR*******PQDFMCVFGDAVKTPVTSCTQEVFRCSHPELTAFTSGTDQ*IK********************************EICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTPNGG**MAWQ*
Disordered Region (DISEMBL)
************************TRGTELFFSLLLFIAFSFYFSSTLSGTDLRFLPAKRPHARNLISNVMKDDFQEVTRLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFSGVLPFTERTAFKCAMPNGARRPPLWQPILTKYPVKENPAKERELLRMKKLAYESISTEDDVVLFVKGV**********PQDFMCVFGDAVKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMHQVQNRTLPSVAYYRP********KSEICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQR
Disordered Region (DISPRO)
*AYYQRTFPPPPDSSLSETTSRRRTRGTELFFSLLLFIAFSFYFSSTLSGTDLRFLPAKRPHARNLISNVMK*******************AKYQSVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFSGVLPFTERTAFKCAMPNGARRPPLWQPILTKYPVKENPAKERELLRMKKLAYESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFGDAVKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMHQVQNRTLPSVAYYRPRQSHAQEPKSEICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTP*GG*******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAYYQRTFPPPPDSSLSETTSRRRTRGTELFFSLLLFIAFSFYFSSTLSGTDLRFLPAKRPHARNLISNVMKDDFQEVTRLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFSGVLPFTERTAFKCAMPNGARRPPLWQPILTKYPVKENPAKERELLRMKKLAYESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFGDAVKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMHQVQNRTLPSVAYYRPRQSHAQEPKSEICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	571	2.2.26 [Sep-21-2011]
Q6YRM6	584	UPF0392 protein Os08g0121	no	no	0.765	0.748	0.366	6e-79
Q94K98	575	UPF0392 protein At1g27200	no	no	0.670	0.666	0.407	7e-77
B9S2H4	578	UPF0392 protein RCOM_0530	N/A	no	0.816	0.806	0.347	1e-72
B9SLR1	552	UPF0392 protein RCOM_0530	N/A	no	0.619	0.641	0.383	3e-70

>sp|Q6YRM6|Y8219_ORYSJ UPF0392 protein Os08g0121900 OS=Oryza sativa subsp. japonica GN=Os08g0121900 PE=2 SV=1

 Score =  295 bits (755), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 179/488 (36%), Positives = 268/488 (54%), Gaps = 51/488 (10%)

Query: 98  SVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFS----GVLPFTERTAFKCAMP 153
           +V LPD  VL++L   + L +   F CL+    +S  R        LP    +   C  P
Sbjct: 109 AVALPD-HVLLMLRDGSLLPASGQFECLYSPVNSSQLRRQPLSVATLP-DGPSLVHC--P 164

Query: 154 NGARRPPLWQPILTKYPVKENPAKERELLRMKKLAYESI--STEDDVVLFVKGVNARSRS 211
            G  R  +   +    PV          L+  +L Y ++  S ++  V+F KG+N R   
Sbjct: 165 AGPSRVAVSLSLAQSVPVAP--------LQWDRLVYTALIDSKDNSTVVFAKGMNLRP-G 215

Query: 212 RSPQPQDFMCVFGD-------AVKTPVTSCTQEVFRCSHPE-----LTAFTSGT------ 253
           R   P  + CVFG         V +PV S  QE+FRC  P      L   T G       
Sbjct: 216 RLGVPSRYECVFGRDFSKPKLVVTSPVVSAAQEIFRCVTPVRIRRYLRMTTGGKNSVNND 275

Query: 254 DQPIKMSLQIMHQVQNRTLPSVAYYRPR---QSHAQEPKSEICVCTMVYNVAKFVKEWVI 310
           D+P+ +S++   +  + TLPS+A   P      H +     +CVCTM+ N A+F++EW+I
Sbjct: 276 DKPMLVSIRTKGR-GSSTLPSIAQPEPLPRYNKHWRRKAHSMCVCTMLRNQARFLREWII 334

Query: 311 YHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHS 370
           YH++IGV+++ +YDN S+D ++ V+N ++   YNVT  LW W K+QEAGF+H A+ A+ S
Sbjct: 335 YHSRIGVQRWFIYDNNSDDGIEEVLNTMDSSRYNVTRYLWPWMKSQEAGFAHCALRARES 394

Query: 371 CKWMLYIDVDEFVYSPSWHDSGPSKHLLK--ALIPQLHSIGQVSIRCLDFGPSGQKSHPI 428
           C+W+ +ID+DEF++ P    +   + +L+  ++ P+   IG++   C  FGPSG+   P 
Sbjct: 395 CEWVGFIDIDEFLHFPG---NQTLQDVLRNYSVKPR---IGELRTACHSFGPSGRTKIPK 448

Query: 429 EGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHY 488
           +GVT GY C+    + +RHKS+V  +A++ SL NVVHHF LK   ++  +     L+NHY
Sbjct: 449 KGVTTGYTCRL--AAPERHKSIVRPDALNPSLINVVHHFHLKEGMKYVNIGQGMMLINHY 506

Query: 489 KYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRL 548
           KYQ W  FK KF  RV+ YVADW+D  N  S+DR PGLG +P++P+ W   FC   D+ L
Sbjct: 507 KYQVWEVFKDKFSGRVATYVADWQDEENVGSRDRAPGLGTKPVEPEDWPRRFCEVYDNGL 566

Query: 549 KLLTQRWF 556
           K   Q+ F
Sbjct: 567 KDFVQKVF 574

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q94K98|Y1720_ARATH UPF0392 protein At1g27200 OS=Arabidopsis thaliana GN=At1g27200 PE=2 SV=2

 Score =  288 bits (738), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 173/425 (40%), Positives = 240/425 (56%), Gaps = 42/425 (9%)

Query: 172 KENPAKERELLRMKKLAYESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFG-----DA 226
           K+   + R +   +K+ YE++   D VV+FVKG+  R    S  P  + C F      + 
Sbjct: 164 KKMKKQSRRVHNWEKVGYEAVIDGDTVVVFVKGLTRRPHKES-DPSYYKCQFEIENSEEK 222

Query: 227 VKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMHQV-------QNRT---LPSVA 276
             T   +  QEV RC  PE           +K++ ++M +V       + RT   LPSVA
Sbjct: 223 EVTQAIAAAQEVVRCGLPE----------SLKLNPEMMFRVSVIHIDPRGRTTPALPSVA 272

Query: 277 -YYRPRQSHAQEPKS----EICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDL 331
             Y       +E KS    E+CVCTM++N A F++EW++YH+ +GVE++ +YDN S+D +
Sbjct: 273 RIYGSDSIEKKEKKSGVKHELCVCTMLWNQAPFLREWIMYHSWLGVERWFIYDNNSDDGI 332

Query: 332 QNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDS 391
           Q  +  L+ + YNV+  +W W KTQEAGFSH A+ AK  C W+ + DVDEF Y P+    
Sbjct: 333 QEEIELLSSENYNVSRHVWPWIKTQEAGFSHCAVRAKEECNWVGFFDVDEFYYFPTHRSQ 392

Query: 392 G-PSKHLLKALIPQLHS---IGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRH 447
           G PSK+ LK+L+    S   +G++   C  +GPSG  S P +GVT GY C++   + +RH
Sbjct: 393 GLPSKNALKSLVSNYTSWDLVGEIRTDCHSYGPSGLTSVPSQGVTVGYTCRQ--ANPERH 450

Query: 448 KSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAY 507
           KS++  E +  SL N VHHF+LK       L  S A+VNHYKYQ W  FK KF RRV+ Y
Sbjct: 451 KSIIRPELLTSSLLNEVHHFQLKEGVGHMSLVESVAVVNHYKYQVWDTFKAKFYRRVATY 510

Query: 508 VADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFG-QLTPNGGYK 566
           V DW++  N  SKDR PGLG E I+P  W+  FC   D  LK L    F  Q+T   GY 
Sbjct: 511 VVDWQENQNQGSKDRAPGLGTEAIEPPDWKRRFCEVWDTGLKDLVMSNFADQVT---GY- 566

Query: 567 MAWQR 571
           + WQR
Sbjct: 567 LPWQR 571

Arabidopsis thaliana (taxid: 3702)

>sp|B9S2H4|Y232_RICCO UPF0392 protein RCOM_0530710 OS=Ricinus communis GN=RCOM_0699480 PE=3 SV=1

 Score =  274 bits (701), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 172/495 (34%), Positives = 256/495 (51%), Gaps = 29/495 (5%)

Query: 99  VLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQT---SPARFSGVLPFTERTAFKCAMPNG 155
           VLLPD  +L++ +   +  +++  Y   +NS      PA  S      +++  +C +P  
Sbjct: 88  VLLPDHVLLIVSNKVATSQNLDCVYSNLYNSHDVVLKPA-LSVNQYHRDKSIVRCQLPPN 146

Query: 156 ARRPPLWQPILTKYPVKENPAKERELLRMKKLAYESISTEDDVVLFVKGVNARSRSRSPQ 215
                ++     +       A    ++   ++ YE++   + V +FVKG+N R    S  
Sbjct: 147 NYSAAVYLRWSWEAAEGVAAAAPASVVSWDRVVYEAMLDWNTVAVFVKGLNLRPHKESDS 206

Query: 216 PQDFMCVFGDA---------VKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMHQ 266
            + F C FG +           T   +  QEV RC  P          Q I++++  ++ 
Sbjct: 207 SK-FRCHFGLSKFDKDEGIVFTTEAITAAQEVIRCLLPRSIRNNPVKAQGIRVTVSRINA 265

Query: 267 VQNRT---LPSVAYYRPRQSH---AQEPKSEICVCTMVYNVAKFVKEWVIYHTKIGVEKF 320
            ++     LPSVA     +S+   +   K E+C CTM++N A F+ EW+ YH  +GV+++
Sbjct: 266 GEDGVDAPLPSVAKVYGAKSYEKRSNRGKYELCACTMLWNQASFLHEWITYHAWLGVQRW 325

Query: 321 ILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVD 380
            +YDN S+D +Q VV+ELN   YNVT   W W K QEAGFSH A+ A+  CKW+ + DVD
Sbjct: 326 FIYDNNSDDGIQEVVDELNLQNYNVTRHSWPWIKAQEAGFSHCALRARSECKWLGFFDVD 385

Query: 381 EFVYSPSWHDSGP-SKHLLKALIPQL---HSIGQVSIRCLDFGPSGQKSHPIEGVTQGYN 436
           EF Y P         ++ L+ L+       +  ++   C  FGPSG  S P +GVT GY 
Sbjct: 386 EFFYLPRHRGQDMLGENSLRTLVANYSDSSTYAEIRTICHSFGPSGLTSAPSQGVTVGYT 445

Query: 437 CQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEF 496
           C+    + +RHKS+V  E +D +L NVVHHF+LK  +++  +  S+A+VNHYKYQ W  F
Sbjct: 446 CRL--QAPERHKSIVRPELLDTTLLNVVHHFKLKEGYRYLNVPESTAVVNHYKYQVWDTF 503

Query: 497 KTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWF 556
           K KF RRVS YVA+W++  N  SKDR PGLG   I+P  W   FC   D  LK      F
Sbjct: 504 KAKFFRRVSTYVANWQEDQNQGSKDRAPGLGTVAIEPPDWRLRFCEVWDTGLKDFVLANF 563

Query: 557 GQLTPNGGYKMAWQR 571
                  GY + W+R
Sbjct: 564 ADTA--SGY-LPWER 575

Ricinus communis (taxid: 3988)

>sp|B9SLR1|Y231_RICCO UPF0392 protein RCOM_0530710 OS=Ricinus communis GN=RCOM_0530710 PE=3 SV=1

 Score =  266 bits (681), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 148/386 (38%), Positives = 221/386 (57%), Gaps = 32/386 (8%)

Query: 183 RMKKLAYESISTEDDV-VLFVKGVNARSRSRSPQPQDFMCVFG-------DAVKTPVTSC 234
           R   L YE++   D+  V+FVKG N R+  R      F CV+G         +++ V S 
Sbjct: 161 RWDSLVYEAMIDRDNTTVVFVKGFNLRA-DRIYNASKFECVYGWDFRKTKFVLRSNVISI 219

Query: 235 TQEVFRCSHPELTAFTS--GTDQPIKMSLQIMHQVQNRTLPSVA------YYRPRQSHAQ 286
            QE+ RC  P L+   +    +  IK+S+++  +    TL S+A         P      
Sbjct: 220 AQEIVRCQTP-LSILNNQLKVNNAIKVSIRLKGK---GTLHSIARPGVQLLTDPEPGLRG 275

Query: 287 EPKSEICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVT 346
           E   E+C+CTM+ N  +F+KEWV+YH++IGVE++ +YDN SEDD+ +V+  L    +N++
Sbjct: 276 EKPHEMCICTMLRNQGRFLKEWVMYHSQIGVERWFIYDNNSEDDIDSVIESLIDAKFNIS 335

Query: 347 TLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLH 406
             +W W K QEAGF+H A+ A+  C+W+ +IDVDEF + P+        +L  A+  Q +
Sbjct: 336 RHVWPWVKAQEAGFAHCALRARGLCEWVGFIDVDEFFHLPT------GLNLQDAVKNQSN 389

Query: 407 S---IGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNV 463
           S   + ++ + C  FGPSG K  P +GVT GY C+   +  +RHKS+V  EA++ +L NV
Sbjct: 390 SGNNVAELRVSCHSFGPSGLKHVPAQGVTVGYTCRM--MLPERHKSIVKPEALNSTLINV 447

Query: 464 VHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRT 523
           VHHF L++ F++        ++NHYKYQ W  FK KF RRV+ YV DW++  N  SKDR 
Sbjct: 448 VHHFHLRDGFRYVNADKGILVINHYKYQVWEVFKEKFYRRVATYVVDWQNEQNVGSKDRA 507

Query: 524 PGLGFEPIKPQGWEFEFCNFTDDRLK 549
           PGLG   ++P  W   FC  +D  L+
Sbjct: 508 PGLGTRAVEPPDWSSRFCEVSDTGLR 533

Ricinus communis (taxid: 3988)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	571
255539236	604	conserved hypothetical protein [Ricinus	0.952	0.900	0.518	1e-157
225457558	595	PREDICTED: UPF0392 protein RCOM_0530710-	0.858	0.823	0.566	1e-156
297745558	565	unnamed protein product [Vitis vinifera]	0.858	0.867	0.566	1e-156
449453089	577	PREDICTED: UPF0392 protein At1g27200-lik	0.852	0.844	0.555	1e-155
356517929	585	PREDICTED: UPF0392 protein RCOM_0530710-	0.952	0.929	0.492	1e-150
297802210	588	hypothetical protein ARALYDRAFT_912599 [	0.931	0.904	0.460	1e-137
15235543	588	uncharacterized protein [Arabidopsis tha	0.931	0.904	0.456	1e-134
326526221	575	predicted protein [Hordeum vulgare subsp	0.844	0.838	0.426	1e-110
297606547	540	Os06g0727900 [Oryza sativa Japonica Grou	0.796	0.842	0.452	1e-108
125527759	540	hypothetical protein OsI_03792 [Oryza sa	0.796	0.842	0.452	1e-108

>gi|255539236|ref|XP_002510683.1| conserved hypothetical protein [Ricinus communis] gi|223551384|gb|EEF52870.1| conserved hypothetical protein [Ricinus communis]

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 303/584 (51%), Positives = 380/584 (65%), Gaps = 40/584 (6%)

Query: 16  LSETTSRRRTRGTEL----FFSLLLFIAFSFYFSSTLSGTDLRFLPAKRPHARNLISNVM 71
           +S  T   R R + +    F S  L ++FS YFS     T     P+      NL+    
Sbjct: 31  ISNITETMRCRASAMVLISFISAFLCVSFSLYFSRNSIYTTQVLYPSP-----NLVPP-- 83

Query: 72  KDDFQEVTRLS-RHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSLD----SVEGFYCLF 126
            +  QE   L+  H   VQDS    SVSVL PDWEVLV++SPE   D    S     C +
Sbjct: 84  NNAIQESIILNLNHPQRVQDSIFTPSVSVLFPDWEVLVIVSPEIHSDFPFLSAHNLTCFY 143

Query: 127 WNSQTSPARFSGVLPFTERTAFKCAMPNGARRP-PLWQPILTKYPVKENP------AKER 179
            N+ TSPARFS +LP T +T FKC +P  +RR  P   P+L +   KE P      +   
Sbjct: 144 PNNATSPARFSEILPSTNQTTFKCLLPRSSRRRLPFVAPVLMRLLEKELPIPRPLSSPPE 203

Query: 180 ELLRMKKLAYESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVF------GDAVKTPVTS 233
           E+LR  KL YES S E+DVVLF KG+N R +  +  P +  CVF         VKT VTS
Sbjct: 204 EILRWSKLVYESFSAENDVVLFAKGLNNR-QGINRSPSELRCVFIHESDNNIIVKTAVTS 262

Query: 234 CTQEVFRCSHPELTAFTSGTDQ---PIKMSLQIMHQVQNRTLPSVAYYRP--RQSHAQEP 288
             QEVFRC HP+LTA  SG ++   PIK+ + +      + +P+V+YY P  + ++ +  
Sbjct: 263 SIQEVFRCDHPDLTALVSGVEEGEDPIKLKVSLEVLEVKKVMPTVSYYNPWRKIANPETK 322

Query: 289 KSEICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTL 348
           KS++C  TMVYNV K+++EWV+YH+KIG+EKFILYDN S+DDL  VV ELN  GYNV TL
Sbjct: 323 KSQLCATTMVYNVGKYLREWVMYHSKIGIEKFILYDNDSDDDLSIVVKELNQQGYNVETL 382

Query: 349 LWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSG-PSKHLLKALIPQL-H 406
           LW WPKTQEA FSH A+HA+ SCKWM+Y+DVDEFV++PSW +S  P   LLK+L+P    
Sbjct: 383 LWFWPKTQEAVFSHAALHARDSCKWMMYVDVDEFVFAPSWDNSSQPFDRLLKSLLPSSGE 442

Query: 407 SIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHH 466
            IGQVSI+C +FGPS QKS+P+EGVTQGYNC+R    + RHKS+VLLEAI  SL NV+HH
Sbjct: 443 MIGQVSIKCNEFGPSNQKSNPVEGVTQGYNCRR--RVENRHKSIVLLEAIHRSLHNVIHH 500

Query: 467 FRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGL 526
           F LK  ++ ++LS+  A+VNHYKYQAWSEFK KFRRRVSAYV DW  A NP SKDRTPGL
Sbjct: 501 FSLKEEYRTKQLSLERAVVNHYKYQAWSEFKAKFRRRVSAYVVDWMQAMNPESKDRTPGL 560

Query: 527 GFEPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQ 570
           G+E I+P GWE +FC   DDRLK LTQ+WFG      GY+MAWQ
Sbjct: 561 GYEAIEPPGWENKFCEVRDDRLKFLTQKWFGT-QRETGYRMAWQ 603

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457558|ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 290/512 (56%), Positives = 372/512 (72%), Gaps = 22/512 (4%)

Query: 76  QEVTRLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPE--TSLDSVEGFYCLFWNSQTSP 133
           +E+ R SRHVSS++DS    + SVL PDWEVL+++SPE   S +S E + C+F N+ TSP
Sbjct: 90  EELVRPSRHVSSLRDSITPTTESVLFPDWEVLIIVSPEGEVSSESGEDYQCVFHNNATSP 149

Query: 134 ARFSGVLPFTERTAFKCAMPNGARRPPLW-QPILTKY-PVKENPAKE--RELLRMKKLAY 189
           AR + V PFT+R  FKC +P   RR   + QP LT+  P K+       REL R   LAY
Sbjct: 150 ARPAWVFPFTKRRTFKCVIPRRIRRFRPYFQPALTRAAPAKQREIHSFTRELFRWTFLAY 209

Query: 190 ESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFGD----AVKTPVTSCTQEVFRCSHPE 245
           ES+ST++DVVLFVKGVN R +  +  P    CVFG+    AV+T VT+ +QEVFRC HP+
Sbjct: 210 ESLSTQNDVVLFVKGVNNR-QGVNRSPSQLRCVFGNDATIAVRTAVTTSSQEVFRCRHPD 268

Query: 246 LTAFTSGT--DQPIKMSLQIMHQVQNRTLPSVAYYRPRQSHAQ-EPKSEICVCTMVYNVA 302
           L A + G   ++ IK+SL+I  +  NR +PSVAYY P ++ A  EPKS++C  TM+YN A
Sbjct: 269 LRALSHGEIENERIKISLEISDE--NRVVPSVAYYTPMRTVATLEPKSQLCASTMIYNAA 326

Query: 303 KFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSH 362
           KF+KEWV+YH++IGVEKFILYDNGS+D+LQ +V ELN DG+NV T+LW WPKTQEAGFSH
Sbjct: 327 KFLKEWVVYHSRIGVEKFILYDNGSDDELQTIVEELNQDGFNVKTVLWPWPKTQEAGFSH 386

Query: 363 NAIHAKHSCKWMLYIDVDEFVYSPSW-HDSGPSKHLLKALIPQ--LHSIGQVSIRCLDFG 419
           +AI+AK +CKWM+Y+DVDEFV+SP+W + S PS  +L +L+P     ++GQ+ IRC +FG
Sbjct: 387 SAIYAKDTCKWMMYVDVDEFVFSPTWLNSSTPSTKMLFSLLPNKPTSNVGQILIRCNEFG 446

Query: 420 PSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELS 479
           PS Q SHP+ GVTQGY C+R   ++QRHKS+VLLEA+D SL N VHHF LK  F  + LS
Sbjct: 447 PSNQHSHPVHGVTQGYTCRR--RAEQRHKSVVLLEAVDSSLVNAVHHFGLKEGFNGKRLS 504

Query: 480 MSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFE 539
           +S  +VNHYKYQAWSEFK KFRRRVSAYV DW D  NP SKDR PGLGF PI+P+GW  +
Sbjct: 505 LSQGVVNHYKYQAWSEFKAKFRRRVSAYVVDWTDEANPTSKDRAPGLGFLPIEPKGWASK 564

Query: 540 FCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQR 571
           FC   D+RLK++TQRWF  +      KMAW++
Sbjct: 565 FCEMNDERLKMVTQRWFA-IPWTSENKMAWEK 595

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745558|emb|CBI40723.3| unnamed protein product [Vitis vinifera]

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 290/512 (56%), Positives = 372/512 (72%), Gaps = 22/512 (4%)

Query: 76  QEVTRLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPE--TSLDSVEGFYCLFWNSQTSP 133
           +E+ R SRHVSS++DS    + SVL PDWEVL+++SPE   S +S E + C+F N+ TSP
Sbjct: 60  EELVRPSRHVSSLRDSITPTTESVLFPDWEVLIIVSPEGEVSSESGEDYQCVFHNNATSP 119

Query: 134 ARFSGVLPFTERTAFKCAMPNGARRPPLW-QPILTKY-PVKENPAKE--RELLRMKKLAY 189
           AR + V PFT+R  FKC +P   RR   + QP LT+  P K+       REL R   LAY
Sbjct: 120 ARPAWVFPFTKRRTFKCVIPRRIRRFRPYFQPALTRAAPAKQREIHSFTRELFRWTFLAY 179

Query: 190 ESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFGD----AVKTPVTSCTQEVFRCSHPE 245
           ES+ST++DVVLFVKGVN R +  +  P    CVFG+    AV+T VT+ +QEVFRC HP+
Sbjct: 180 ESLSTQNDVVLFVKGVNNR-QGVNRSPSQLRCVFGNDATIAVRTAVTTSSQEVFRCRHPD 238

Query: 246 LTAFTSGT--DQPIKMSLQIMHQVQNRTLPSVAYYRPRQSHAQ-EPKSEICVCTMVYNVA 302
           L A + G   ++ IK+SL+I  +  NR +PSVAYY P ++ A  EPKS++C  TM+YN A
Sbjct: 239 LRALSHGEIENERIKISLEISDE--NRVVPSVAYYTPMRTVATLEPKSQLCASTMIYNAA 296

Query: 303 KFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSH 362
           KF+KEWV+YH++IGVEKFILYDNGS+D+LQ +V ELN DG+NV T+LW WPKTQEAGFSH
Sbjct: 297 KFLKEWVVYHSRIGVEKFILYDNGSDDELQTIVEELNQDGFNVKTVLWPWPKTQEAGFSH 356

Query: 363 NAIHAKHSCKWMLYIDVDEFVYSPSW-HDSGPSKHLLKALIPQ--LHSIGQVSIRCLDFG 419
           +AI+AK +CKWM+Y+DVDEFV+SP+W + S PS  +L +L+P     ++GQ+ IRC +FG
Sbjct: 357 SAIYAKDTCKWMMYVDVDEFVFSPTWLNSSTPSTKMLFSLLPNKPTSNVGQILIRCNEFG 416

Query: 420 PSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELS 479
           PS Q SHP+ GVTQGY C+R   ++QRHKS+VLLEA+D SL N VHHF LK  F  + LS
Sbjct: 417 PSNQHSHPVHGVTQGYTCRR--RAEQRHKSVVLLEAVDSSLVNAVHHFGLKEGFNGKRLS 474

Query: 480 MSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFE 539
           +S  +VNHYKYQAWSEFK KFRRRVSAYV DW D  NP SKDR PGLGF PI+P+GW  +
Sbjct: 475 LSQGVVNHYKYQAWSEFKAKFRRRVSAYVVDWTDEANPTSKDRAPGLGFLPIEPKGWASK 534

Query: 540 FCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQR 571
           FC   D+RLK++TQRWF  +      KMAW++
Sbjct: 535 FCEMNDERLKMVTQRWFA-IPWTSENKMAWEK 565

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453089|ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [Cucumis sativus] gi|449489430|ref|XP_004158309.1| PREDICTED: UPF0392 protein At1g27200-like [Cucumis sativus]

 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 290/522 (55%), Positives = 369/522 (70%), Gaps = 35/522 (6%)

Query: 74  DF-QEVTRLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSL---DSVEGFYCLFWNS 129
           DF Q++T  +RHVSS+ D     +VS+LLPDWEVL++ S +T L   DS   F CLF N+
Sbjct: 64  DFPQQLTHRTRHVSSILDPIP--TVSLLLPDWEVLLISSIDTPLSSPDSFRDFLCLFQNN 121

Query: 130 QTSPARFSGVLPFTERTAFKCAMPNGARR-PPLWQPILTKYPVKE--------NPAKERE 180
            TS A FSGVL FT R  FKC MP   RR  P +QP+LTK P KE        +PA E  
Sbjct: 122 ATSSANFSGVLDFTGRVTFKCLMPESVRRLRPFFQPLLTKSPDKEFSSSLSSSSPAPE-- 179

Query: 181 LLRMKKLAYESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFGD---AVKTPVTSCTQE 237
           L+R    AYE+  TE+DVVLFVKGVN R  S   QP D  CVFGD   A++T VTS  QE
Sbjct: 180 LMRWTFFAYEAFETEEDVVLFVKGVNNRQGSNR-QPTDLNCVFGDGDDAIRTAVTSSVQE 238

Query: 238 VFRCSHPELTAFTSGTDQPIKMSLQIMH-QVQNRTLPSVAYYRPRQSH------AQEPKS 290
           VFRC HP LT  TS      K++L+I+  + +N  +PSVAYY PR+S         E +S
Sbjct: 239 VFRCRHPNLT--TSEDHDKFKITLEILDARGKNILVPSVAYYSPRRSGDGGGLVETEAQS 296

Query: 291 EICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLW 350
            IC CTMVYNV KF++EWV+Y+++IGVEKFILYDNGSED++  V+ EL  +GYN+  + W
Sbjct: 297 MICACTMVYNVGKFLREWVMYYSRIGVEKFILYDNGSEDEISAVLKELKQEGYNIEIVFW 356

Query: 351 IWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDS-GPSKHLLKALIPQLHS-I 408
           IWPKTQEAGFSH+  ++K SCKWM+++D+DEFV+SPSW +S  PSK++L +L+P  +S I
Sbjct: 357 IWPKTQEAGFSHSVEYSKKSCKWMMFVDIDEFVFSPSWLNSLKPSKNMLNSLLPTKNSGI 416

Query: 409 GQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFR 468
           G V++ C D+GPS + SHP EGVTQGYNC+R    ++RHKS+VLLEA+D SL NV+HHF+
Sbjct: 417 GMVTVMCNDYGPSDRISHPAEGVTQGYNCRR--KVEERHKSIVLLEAVDRSLLNVIHHFK 474

Query: 469 LKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGF 528
           L+  FQ R++ +  A+VNHYKYQAW EF+ KFRRRVSAYV DW+++ NP SKDR PGLG 
Sbjct: 475 LRKEFQSRQMRVEEAVVNHYKYQAWPEFRMKFRRRVSAYVVDWKNSANPTSKDRAPGLGN 534

Query: 529 EPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQ 570
             ++P  W  +FC   DDRL+LLTQRWFG  T + GY+MAWQ
Sbjct: 535 TAVEPPEWPRKFCEVRDDRLRLLTQRWFGYETAD-GYRMAWQ 575

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517929|ref|XP_003527638.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 289/587 (49%), Positives = 378/587 (64%), Gaps = 43/587 (7%)

Query: 22  RRRTRGTEL--FFSLLLFIAFSFYFSSTLSGT-----DLRFLPAKRPHARNLISNVMKDD 74
           RRR R + L    S+L F +FS Y S     T     DLR L A   H      N     
Sbjct: 2   RRRPRTSFLVSLLSILTFASFSLYLSRNAISTWRPYSDLRKLNAVTNHLVLHNRNKNNIF 61

Query: 75  FQEVTRLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPA 134
             + +R +R VSS++D+    +VSVL+PDWE+LV+++P T L S +  +CLF N+ +SPA
Sbjct: 62  NNQFSRQTRRVSSIKDTL-LSTVSVLIPDWEILVIVAPNTPLSSSDTPHCLFPNNASSPA 120

Query: 135 RFSGVLPFTERTAFKCAMPNGARRPPLW-QPILTKYPVKEN--PAKERELLRMKKLAYES 191
           +FSGVLPFT RT FKC +P   RR  ++ QP+L   P  E   P+   ELL+   L YES
Sbjct: 121 KFSGVLPFTNRTTFKCDLPEPVRRRRMFSQPMLVTSPTSETEFPSPAPELLKWNFLVYES 180

Query: 192 ISTEDDVVLFVKGVNARSRSRSPQPQDFMCVF---GDAVKTPVTSCTQEVFRCSHPELTA 248
            STE+DVV+F KGVN R+   +  P++  CVF      +   VTS  QEVFRC HP+ + 
Sbjct: 181 FSTENDVVVFAKGVNHRN-GDNRSPEELRCVFDLGSGVLNVAVTSSVQEVFRCPHPDPSE 239

Query: 249 --FTSGTDQPIKMSLQIMHQVQNRTLPSVAYYRPRQ-----------SHAQEPKSEICVC 295
             F S    P ++ + +    +N  +PSVAYY P+            S    PK  +C C
Sbjct: 240 LDFDSHYGLPNRIGISLEIVSENTVVPSVAYYIPKPGLKPKLMTNDLSVQARPKYFLCAC 299

Query: 296 TMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKT 355
           TMVYNVAK ++EWV+YH K+GVE FILYDN S+DDL  V++EL   GYN++TL WIWPKT
Sbjct: 300 TMVYNVAKVLREWVMYHAKVGVENFILYDNASDDDLYAVIDELRKQGYNISTLFWIWPKT 359

Query: 356 QEAGFSHNAIHAKHS--CKWMLYIDVDEFVYSPSW-HDSGPS-------KHLLKALIPQL 405
           QEAGFSH+ +++K    C W++Y+DVDEFV+SPSW H++  S       K L + +I   
Sbjct: 360 QEAGFSHSVVYSKSKELCSWIMYVDVDEFVFSPSWGHETENSVVVPSLKKLLAREIIKGG 419

Query: 406 HSIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVH 465
             +GQVS+RC++FGPSGQ+ HP EGVTQGY C+R    +QRHKSMVL+EA+D SL NV+H
Sbjct: 420 TRVGQVSMRCMEFGPSGQRRHPEEGVTQGYTCRR--RGEQRHKSMVLVEAVDPSLRNVIH 477

Query: 466 HFRL--KNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRT 523
           HF++  +  F  +++S+   LVNHYKYQAW EFK+KFRRRVSAYV DW+   NPNSKDRT
Sbjct: 478 HFQVNERKGFMSKQVSVEEGLVNHYKYQAWDEFKSKFRRRVSAYVVDWKQEINPNSKDRT 537

Query: 524 PGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQ 570
           PGLGF+ I+P+ W   FC   D RLK LT+ WF  +TPN GY+MAWQ
Sbjct: 538 PGLGFQAIEPKDWTHRFCEVRDQRLKSLTRAWFRSVTPN-GYRMAWQ 583

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802210|ref|XP_002868989.1| hypothetical protein ARALYDRAFT_912599 [Arabidopsis lyrata subsp. lyrata] gi|297314825|gb|EFH45248.1| hypothetical protein ARALYDRAFT_912599 [Arabidopsis lyrata subsp. lyrata]

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/567 (46%), Positives = 362/567 (63%), Gaps = 35/567 (6%)

Query: 24  RTRGTELFFSLLLFIAFSFYFSSTLSGTDLR--FLPAKRPHARNLISNVMKDDFQEVTRL 81
           R   T LFF L+    F F+       T  R  F    RP    ++S V+       T+ 
Sbjct: 38  RAHTTTLFFILVSLSLFGFFSLYCSPNTIYRAAFFATTRPSKSRIVSYVIN------TQD 91

Query: 82  SRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSLDS----VEGFYCLFWNSQTSPARFS 137
           S H      S + ++ +VL P W++LV++SPE  +       E + C + N + S ARF+
Sbjct: 92  SSHHQLSNGSRRIRAEAVLWPGWDILVIVSPEEKVMPPQLPGENYTCFYPNGEKSIARFA 151

Query: 138 GVLPFTERTAFKCAMPNGARRP-PLWQPILTKYPVKENPAKER--ELLRMKKLAYESIST 194
            +LPF+ RT+F+C++P   R   P+  PIL      +   + R  +L     + +E+IST
Sbjct: 152 AILPFSNRTSFRCSLPGIYRHHHPIPTPILASSKTFQLSPETRWPDLPLWNFVVFEAIST 211

Query: 195 EDDVVLFVKGVNARSRSRSPQPQDFMCVFGD----AVKTPVTSCTQEVFRCSHPELTAFT 250
           E+DVVLFVKG N    S  P P+ F CVFG+    A++T VTS  QEVFRCS P++T   
Sbjct: 212 ENDVVLFVKGPNRGLGSNKP-PESFRCVFGEESDTAIRTAVTSSVQEVFRCSLPDIT--- 267

Query: 251 SGTDQPIKMSLQIM--HQVQNRTLPSVAYYRPRQSHAQEPKSEICVC--TMVYNVAKFVK 306
              D PIK+ L+ +   + + +T+PSVAYY P+ + A EP+ ++ +C  TMVYNVAK+++
Sbjct: 268 --IDTPIKIYLEAVATDKEETKTIPSVAYYTPKHTLA-EPREKVLLCATTMVYNVAKYLR 324

Query: 307 EWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIH 366
           EWV+YH  IG+++FI+YDNGS+D+L +VV  LN + Y+V  +LWIWPKTQEAGFSH A++
Sbjct: 325 EWVMYHAAIGIQRFIIYDNGSDDELNDVVEVLNSEKYDVIKVLWIWPKTQEAGFSHAAVY 384

Query: 367 AKHSCKWMLYIDVDEFVYSPSW-HDSGPSKHLLKALIPQLHS-IGQVSIRCLDFGPSGQK 424
              +C WM+Y+DVDEF++SP+W   S PS  ++++L+P  HS IGQVS +  +FGPS Q 
Sbjct: 385 GNDTCTWMMYLDVDEFLFSPAWDKQSQPSDRMIRSLLPSNHSMIGQVSFKSHEFGPSNQT 444

Query: 425 SHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSAL 484
            HP EGVTQGY C+R +   QRHKS+V L  ++ SL   +HHF LK  ++WR       +
Sbjct: 445 KHPREGVTQGYTCRREE--DQRHKSIVRLSVVEHSLYTAIHHFGLKGEYEWRVADTEEGV 502

Query: 485 VNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFT 544
           VNHYKYQAW EFK KF+RRVSAYV DW   +NP S+DRTPGLGF+P++P GW ++FC   
Sbjct: 503 VNHYKYQAWREFKAKFKRRVSAYVVDWTRVSNPKSRDRTPGLGFKPVEPDGWAYKFCEVM 562

Query: 545 DDRLKLLTQRWFGQLTPNGGYKMAWQR 571
           D RLK LT++WFG    N GY+MAWQR
Sbjct: 563 DLRLKRLTKKWFGYPVKN-GYRMAWQR 588

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235543|ref|NP_195458.1| uncharacterized protein [Arabidopsis thaliana] gi|4468808|emb|CAB38209.1| putative protein [Arabidopsis thaliana] gi|7270724|emb|CAB80407.1| putative protein [Arabidopsis thaliana] gi|332661391|gb|AEE86791.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/567 (45%), Positives = 355/567 (62%), Gaps = 35/567 (6%)

Query: 24  RTRGTELFF---SLLLFIAFSFYFSSTLSGTDLRFLPAKRPHARNLISNVMKDDFQEVTR 80
           R   T LFF   SL LF   S Y+S   +     F    RP     +S V+       T+
Sbjct: 38  RAHTTTLFFILVSLSLFGFISLYYSPN-TIYRAAFFATTRPAKSRFVSYVIN------TQ 90

Query: 81  LSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSLDS----VEGFYCLFWNSQTSPARF 136
            S H      S + ++ +VL P WE+LV++SPE          E + C + N + S ARF
Sbjct: 91  DSNHHQLSNGSRRIRAEAVLWPGWEILVIVSPEEKAKPPPFPGENYICFYPNGEKSTARF 150

Query: 137 SGVLPFTERTAFKCAMPNGARRP-PLWQPILTKYPVKENPAKER--ELLRMKKLAYESIS 193
           + +LPF+ R +F+C++P   R   P+  PIL      +   + R  +L     + +E+IS
Sbjct: 151 AAILPFSNRASFRCSLPGIYRHHHPIPTPILASSKRFQLSPETRWPDLPLWNFVVFEAIS 210

Query: 194 TEDDVVLFVKGVNARSRSRSPQPQDFMCVFGD----AVKTPVTSCTQEVFRCSHPELTAF 249
           TE DVVL VKG N    S  P P+ F CVFG+    A++T VTS  QEVFRCS P +T  
Sbjct: 211 TETDVVLLVKGPNRGLGSNKP-PESFRCVFGEESDTAIRTAVTSSVQEVFRCSLPNIT-- 267

Query: 250 TSGTDQPIKMSLQIMH--QVQNRTLPSVAYYRPRQSHAQ-EPKSEICVCTMVYNVAKFVK 306
               D P+K+ L+ +   + + +T+PSVAYY P+++  +   KS +C  TMVYNVAK+++
Sbjct: 268 ---IDTPVKIYLEAVATGKEETKTVPSVAYYSPKRTLVEPREKSLLCATTMVYNVAKYLR 324

Query: 307 EWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIH 366
           EWV+YH  IG+++FI+YDNGS+D+L +VV  LN + Y+V  +LWIWPKTQEAGFSH A++
Sbjct: 325 EWVMYHAAIGIQRFIIYDNGSDDELNDVVKGLNSEKYDVIKVLWIWPKTQEAGFSHAAVY 384

Query: 367 AKHSCKWMLYIDVDEFVYSPSW-HDSGPSKHLLKALIPQLHS-IGQVSIRCLDFGPSGQK 424
              +C WM+Y+DVDEF++SP+W   S PS  ++++L+P   S IGQVS +  +FGPS Q 
Sbjct: 385 GNDTCTWMMYLDVDEFLFSPAWDKQSQPSDQMIRSLLPSDQSMIGQVSFKSHEFGPSNQT 444

Query: 425 SHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSAL 484
            HP  GVTQGY C+R +   QRHKS+V L A++ SL   +HHF LK  ++WR       +
Sbjct: 445 KHPRGGVTQGYTCRREE--DQRHKSIVRLSAVEHSLYTAIHHFGLKREYEWRVADTEEGV 502

Query: 485 VNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFT 544
           VNHYKYQAW EFK KF+RRVSAYV DW   +NP S+DRTPGLGF P++P+GW  +FC   
Sbjct: 503 VNHYKYQAWQEFKAKFKRRVSAYVVDWTRVSNPKSRDRTPGLGFRPVEPEGWAHKFCEVE 562

Query: 545 DDRLKLLTQRWFGQLTPNGGYKMAWQR 571
           D RLK+LT++WFG    N GY+MAWQR
Sbjct: 563 DLRLKILTRKWFGYPVKN-GYRMAWQR 588

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326526221|dbj|BAJ97127.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/534 (42%), Positives = 310/534 (58%), Gaps = 52/534 (9%)

Query: 53  LRFLPAKRPHARNLISNVMKDDFQEVTRLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSP 112
           L+ +PA+R H R  +  V         R SR       S   ++ +VL+PDWEVLVLL P
Sbjct: 49  LQLVPARRLHVR--LGAVKGTAATAAGRKSR-------SPPLETEAVLMPDWEVLVLLRP 99

Query: 113 ETSLDSVEGFYCLFWNSQTSPARFSGVLPFTERTAFKCAMPNGARRPPLWQPILT----- 167
             + D+     C F    +SPAR  G LP + R A+ C +P  ARR    +         
Sbjct: 100 GAADDTGGNATCAFGRGASSPARALGRLPASGRHAYLCVVPGPARRQRRLRAPRLVIASS 159

Query: 168 ----KYPVKENPAKERELLR-MKKLAYES-ISTEDDVVLFVKGVNARSRSRSPQPQDFMC 221
                        K  E+LR   +L YES + T  DV++F KGVN R +  +    D  C
Sbjct: 160 SSASMVSTATGGGKSHEILRWSGRLVYESAVVTGGDVLVFAKGVNPR-QGVNRAASDIRC 218

Query: 222 VF----------GDAVKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMHQVQNRT 271
           V+          G     P  +  Q+VFRC  P     ++     ++++L +  +     
Sbjct: 219 VYYRRAGPGGDDGVVATLPAATSAQQVFRCPPPP----SAAASHELRVTLTVAGE---DP 271

Query: 272 LPSVAYYRP-RQSHAQEPKSE---ICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGS 327
           LPS+A Y P R   +  P  E   IC CTMV +VAKF+ EWV+YH  +GV++F LYDNGS
Sbjct: 272 LPSLAVYTPPRSGSSSTPAPEKKLICACTMVRDVAKFLPEWVVYHAAVGVDRFYLYDNGS 331

Query: 328 EDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPS 387
           EDDL++ V+ LN  GYN++T+ W W K QEAGFSH A   + SC+WM ++DVDEF++SP+
Sbjct: 332 EDDLEDQVHRLNSAGYNISTVTWPWAKAQEAGFSHGAGVLRDSCEWMAFVDVDEFIFSPT 391

Query: 388 WHDS-GPSKHLLKALIPQLH-SIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQ 445
           W+ S  P++ +L++++      +G+VS+RC DFGPSGQ S+P EGVTQGY C+R   +++
Sbjct: 392 WNQSKAPTESMLRSIVSTAKPDVGRVSLRCADFGPSGQTSNPKEGVTQGYTCRR--RAEE 449

Query: 446 RHKSMVLLEAIDDSLDNVVHHFRLKNTF--QWRELSMSSALVNHYKYQAWSEFKTKFRRR 503
           RHKS++ L+A+DDSL N +HHF L+  F  +W +       VNHYKYQAW EFK KFRRR
Sbjct: 450 RHKSLLRLDAVDDSLLNSIHHFTLRPGFRVEWSK----RVRVNHYKYQAWEEFKVKFRRR 505

Query: 504 VSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFG 557
           VS YVADW D  N  SKDRTPGLGFE ++P GW  +FC   D  L   T+RWFG
Sbjct: 506 VSTYVADWTDPVNIQSKDRTPGLGFEAVEPVGWTHKFCEVNDTLLHDATRRWFG 559

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297606547|ref|NP_001058639.2| Os06g0727900 [Oryza sativa Japonica Group] gi|54291149|dbj|BAD61822.1| zinc finger protein-like [Oryza sativa Japonica Group] gi|125598573|gb|EAZ38353.1| hypothetical protein OsJ_22727 [Oryza sativa Japonica Group] gi|255677418|dbj|BAF20553.2| Os06g0727900 [Oryza sativa Japonica Group]

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/506 (45%), Positives = 304/506 (60%), Gaps = 51/506 (10%)

Query: 80  RLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFSGV 139
           RL   +++V+++A + + +VLLPDWEVL+LL P  +  +     C F  + +SPAR  G 
Sbjct: 47  RLPLSLAAVREAATWPADAVLLPDWEVLLLLHPNATAIA-HNATCAFQGAASSPARALGR 105

Query: 140 LPFTERTAFKCAMPNGARR-PPLWQP-ILTKYPVKENPAKERELLRMKK----LAYESIS 193
           LP + R A+ CAMP  ARR  P   P I+    V  +P  + EL+ M K    L Y+S+ 
Sbjct: 106 LPSSGRHAYTCAMPEPARRHQPFHAPRIVAMDAVHASPHDDDELVMMVKWSGRLVYDSVV 165

Query: 194 TEDDVVL-FVKGVNARSRSRSPQPQDFMCVF--------GDAVKT-PVTSCTQEVFRCSH 243
            +   VL F KGVN R     P   D  CV+         D V + P  +  Q+VFRC  
Sbjct: 166 VDGGDVLVFAKGVNPRQGVNRPA-SDVRCVYYRGRGGSADDVVASLPAATSAQQVFRCPP 224

Query: 244 P------ELTAFTSGTDQPIKMSLQIMHQVQNRTLPSVAYYR-PRQSHA--QEPKSEICV 294
           P       +T   +G ++PI               PSVA Y  P  S A   + + +IC 
Sbjct: 225 PPPAALLRVTLALAGEEEPI---------------PSVATYSLPPASAAATHKRRHKICA 269

Query: 295 CTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPK 354
           CTMV +V KFV+EWV YH  +GV +FILYDNGSEDDL   V  L  +G +VTTL W WPK
Sbjct: 270 CTMVRDVGKFVREWVAYHAAVGVGRFILYDNGSEDDLDEQVRRLTAEGMDVTTLAWPWPK 329

Query: 355 TQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSG-PSKHLLKALIPQLHSIGQVSI 413
           TQEAGFSH+A   + +C+WM +IDVDEF++SP+W  +  PS  +L++++     +GQVS+
Sbjct: 330 TQEAGFSHSAAVHRDACEWMAFIDVDEFIFSPNWATAASPSSSMLRSIVAVKPDVGQVSL 389

Query: 414 RCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNT- 472
            C+DFGPSG+ +HP EGVTQGY C+R  V  +RHKS++ LEA + SL N VHHF L+   
Sbjct: 390 GCVDFGPSGRTTHPPEGVTQGYTCRRRAV--ERHKSLLRLEAAERSLVNSVHHFELREGK 447

Query: 473 -FQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPI 531
             +W       A VNHYK+QAW EF+ KFRRRVSAYVADW    N  SKDRTPGLGF+P+
Sbjct: 448 RGEWNR----RARVNHYKFQAWDEFRLKFRRRVSAYVADWTHRVNLQSKDRTPGLGFDPV 503

Query: 532 KPQGWEFEFCNFTDDRLKLLTQRWFG 557
           +P GW  +FC   D  L+ +T+RWF 
Sbjct: 504 QPAGWAAKFCEVNDTLLRDVTRRWFA 529

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125527759|gb|EAY75873.1| hypothetical protein OsI_03792 [Oryza sativa Indica Group]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/506 (45%), Positives = 303/506 (59%), Gaps = 51/506 (10%)

Query: 80  RLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPETSLDSVEGFYCLFWNSQTSPARFSGV 139
           RL   +++V+++A + + +VLLPDWEVL+LL P  +  +     C F    +SPAR  G 
Sbjct: 47  RLPLSLAAVREAATWPADAVLLPDWEVLLLLHPNATAIA-HNATCAFQGGASSPARALGR 105

Query: 140 LPFTERTAFKCAMPNGARR-PPLWQP-ILTKYPVKENPAKERELLRMKK----LAYESIS 193
           LP + R A+ CAMP  ARR  P   P I+    V  +P  + EL+ M K    L Y+S+ 
Sbjct: 106 LPSSGRHAYTCAMPEPARRHQPFHAPRIVAMDAVHASPHDDDELVMMVKWSGRLVYDSVV 165

Query: 194 TEDDVVL-FVKGVNARSRSRSPQPQDFMCVF--------GDAVKT-PVTSCTQEVFRCSH 243
            +   VL F KGVN R     P   D  CV+         D V + P  +  Q+VFRC  
Sbjct: 166 VDGGDVLVFAKGVNPRQGVNRPA-SDVRCVYYRGRGGSADDVVASLPAATSAQQVFRCPP 224

Query: 244 P------ELTAFTSGTDQPIKMSLQIMHQVQNRTLPSVAYYR-PRQSHA--QEPKSEICV 294
           P       +T   +G ++PI               PSVA Y  P  S A   + + +IC 
Sbjct: 225 PPPAALLRVTLALAGEEEPI---------------PSVATYSLPPASAAATHKRRHKICA 269

Query: 295 CTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPK 354
           CTMV +V KFV+EWV YH  +GV +FILYDNGSEDDL   V  L  +G +VTTL W WPK
Sbjct: 270 CTMVRDVGKFVREWVAYHAAVGVGRFILYDNGSEDDLDEQVRRLTAEGMDVTTLAWPWPK 329

Query: 355 TQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSG-PSKHLLKALIPQLHSIGQVSI 413
           TQEAGFSH+A   + +C+WM +IDVDEF++SP+W  +  PS  +L++++     +GQVS+
Sbjct: 330 TQEAGFSHSAAVHRDACEWMAFIDVDEFIFSPNWATAASPSSSMLRSIVAVKPDVGQVSL 389

Query: 414 RCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNT- 472
            C+DFGPSG+ +HP EGVTQGY C+R  V  +RHKS++ LEA + SL N VHHF L+   
Sbjct: 390 GCVDFGPSGRTTHPPEGVTQGYTCRRRAV--ERHKSLLRLEAAERSLVNSVHHFELREGK 447

Query: 473 -FQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPI 531
             +W       A VNHYK+QAW EF+ KFRRRVSAYVADW    N  SKDRTPGLGF+P+
Sbjct: 448 RGEWNR----RARVNHYKFQAWDEFRLKFRRRVSAYVADWTHRVNLQSKDRTPGLGFDPV 503

Query: 532 KPQGWEFEFCNFTDDRLKLLTQRWFG 557
           +P GW  +FC   D  L+ +T+RWF 
Sbjct: 504 QPAGWAAKFCEVNDTLLRDVTRRWFA 529

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	571
TAIR|locus:2126392	588	AT4G37420 "AT4G37420" [Arabido	0.879	0.853	0.463	6.8e-127
TAIR|locus:2205829	575	AT1G27200 [Arabidopsis thalian	0.683	0.678	0.413	2.1e-77
TAIR|locus:2168798	583	AT5G40720 "AT5G40720" [Arabido	0.802	0.785	0.355	3.2e-72
TAIR|locus:2086666	913	AT3G27330 [Arabidopsis thalian	0.647	0.405	0.385	3e-69
TAIR|locus:2152130	519	GALS2 "AT5G44670" [Arabidopsis	0.373	0.410	0.218	0.00044

TAIR|locus:2126392 AT4G37420 "AT4G37420" [Arabidopsis thaliana (taxid:3702)]

 Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
 Identities = 247/533 (46%), Positives = 341/533 (63%)

Query:    55 FLPAKRPHARNLISNVMKDDFQEVTRLSRHVSSVQDSAKYQSVSVLLPDWEVLVLLSPET 114
             F    RP     +S V+       T+ S H      S + ++ +VL P WE+LV++SPE 
Sbjct:    71 FFATTRPAKSRFVSYVIN------TQDSNHHQLSNGSRRIRAEAVLWPGWEILVIVSPEE 124

Query:   115 SLDSV----EGFYCLFWNSQTSPARFSGVLPFTERTAFKCAMPNGARRP-PLWQPILTKY 169
                      E + C + N + S ARF+ +LPF+ R +F+C++P   R   P+  PIL   
Sbjct:   125 KAKPPPFPGENYICFYPNGEKSTARFAAILPFSNRASFRCSLPGIYRHHHPIPTPILASS 184

Query:   170 PVKENPAKER--ELLRMKKLAYESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFGD-- 225
                +   + R  +L     + +E+ISTE DVVL VKG N    S  P P+ F CVFG+  
Sbjct:   185 KRFQLSPETRWPDLPLWNFVVFEAISTETDVVLLVKGPNRGLGSNKP-PESFRCVFGEES 243

Query:   226 --AVKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMH--QVQNRTLPSVAYYRPR 281
               A++T VTS  QEVFRCS P +T      D P+K+ L+ +   + + +T+PSVAYY P+
Sbjct:   244 DTAIRTAVTSSVQEVFRCSLPNITI-----DTPVKIYLEAVATGKEETKTVPSVAYYSPK 298

Query:   282 QSHAQ-EPKSEICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNG 340
             ++  +   KS +C  TMVYNVAK+++EWV+YH  IG+++FI+YDNGS+D+L +VV  LN 
Sbjct:   299 RTLVEPREKSLLCATTMVYNVAKYLREWVMYHAAIGIQRFIIYDNGSDDELNDVVKGLNS 358

Query:   341 DGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWH-DSGPSKHLLK 399
             + Y+V  +LWIWPKTQEAGFSH A++   +C WM+Y+DVDEF++SP+W   S PS  +++
Sbjct:   359 EKYDVIKVLWIWPKTQEAGFSHAAVYGNDTCTWMMYLDVDEFLFSPAWDKQSQPSDQMIR 418

Query:   400 ALIPQLHS-IGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDD 458
             +L+P   S IGQVS +  +FGPS Q  HP  GVTQGY C+R +   QRHKS+V L A++ 
Sbjct:   419 SLLPSDQSMIGQVSFKSHEFGPSNQTKHPRGGVTQGYTCRREE--DQRHKSIVRLSAVEH 476

Query:   459 SLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPN 518
             SL   +HHF LK  ++WR       +VNHYKYQAW EFK KF+RRVSAYV DW   +NP 
Sbjct:   477 SLYTAIHHFGLKREYEWRVADTEEGVVNHYKYQAWQEFKAKFKRRVSAYVVDWTRVSNPK 536

Query:   519 SKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQR 571
             S+DRTPGLGF P++P+GW  +FC   D RLK+LT++WFG    NG Y+MAWQR
Sbjct:   537 SRDRTPGLGFRPVEPEGWAHKFCEVEDLRLKILTRKWFGYPVKNG-YRMAWQR 588

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2205829 AT1G27200 [Arabidopsis thaliana (taxid:3702)]

 Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
 Identities = 174/421 (41%), Positives = 245/421 (58%)

Query:   171 VKENPAKE-RELLRMKKLAYESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFG--DAV 227
             VK+   K+ R +   +K+ YE++   D VV+FVKG+  R    S  P  + C F   ++ 
Sbjct:   162 VKKKMKKQSRRVHNWEKVGYEAVIDGDTVVVFVKGLTRRPHKES-DPSYYKCQFEIENSE 220

Query:   228 KTPVT---SCTQEVFRCSHPELTAFTSGTDQPIKMSLQIMH-QVQNRT---LPSVA-YYR 279
             +  VT   +  QEV RC  PE  +     +   ++S  ++H   + RT   LPSVA  Y 
Sbjct:   221 EKEVTQAIAAAQEVVRCGLPE--SLKLNPEMMFRVS--VIHIDPRGRTTPALPSVARIYG 276

Query:   280 PRQSHAQEPKS----EICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVV 335
                   +E KS    E+CVCTM++N A F++EW++YH+ +GVE++ +YDN S+D +Q  +
Sbjct:   277 SDSIEKKEKKSGVKHELCVCTMLWNQAPFLREWIMYHSWLGVERWFIYDNNSDDGIQEEI 336

Query:   336 NELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSG-PS 394
               L+ + YNV+  +W W KTQEAGFSH A+ AK  C W+ + DVDEF Y P+    G PS
Sbjct:   337 ELLSSENYNVSRHVWPWIKTQEAGFSHCAVRAKEECNWVGFFDVDEFYYFPTHRSQGLPS 396

Query:   395 KHLLKALIPQLHS---IGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMV 451
             K+ LK+L+    S   +G++   C  +GPSG  S P +GVT GY C++   + +RHKS++
Sbjct:   397 KNALKSLVSNYTSWDLVGEIRTDCHSYGPSGLTSVPSQGVTVGYTCRQ--ANPERHKSII 454

Query:   452 LLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADW 511
               E +  SL N VHHF+LK       L  S A+VNHYKYQ W  FK KF RRV+ YV DW
Sbjct:   455 RPELLTSSLLNEVHHFQLKEGVGHMSLVESVAVVNHYKYQVWDTFKAKFYRRVATYVVDW 514

Query:   512 RDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLK-LLTQRWFGQLTPNGGYKMAWQ 570
             ++  N  SKDR PGLG E I+P  W+  FC   D  LK L+   +  Q+T   GY + WQ
Sbjct:   515 QENQNQGSKDRAPGLGTEAIEPPDWKRRFCEVWDTGLKDLVMSNFADQVT---GY-LPWQ 570

Query:   571 R 571
             R
Sbjct:   571 R 571

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2168798 AT5G40720 "AT5G40720" [Arabidopsis thaliana (taxid:3702)]

 Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
 Identities = 176/495 (35%), Positives = 260/495 (52%)

Query:    98 SVLLPDWEVLVLLSPETS-LDSVEGFYCLFWNSQTSPARFSGVLPF---TE---RTAFKC 150
             +V  PD  ++ L  P +S   + E  +C+F +   S   F   LPF   T+   R   +C
Sbjct:    73 AVEFPDQTLIFLKYPPSSRFFTKEDLFCVFSDVNDSSKLFKE-LPFAVETDDYGRQIVRC 131

Query:   151 -AMPNGARRPPLWQPILTKYPVKENPAKERELLRMKKLAYESISTEDD-VVLFVKGVNAR 208
              A+P G     L    ++++ V +   +     R   L Y+++  +D+  V+FVKG+N R
Sbjct:   132 SAVPRG-NTVSL---AVSRWRVDDYNLQVGLTHRWDWLVYDAVIDDDNSTVVFVKGLNLR 187

Query:   209 SRSRSPQPQDFMCVFG-DAVKTPVT------SCTQEVFRCSHPELTAFTS---GTDQPIK 258
                +      + CV+G D  K  +       S  QE+ RC  P LT          QP+K
Sbjct:   188 P-GKVADASRYECVYGWDFTKPKLLLRAQAISAAQEIVRCKTP-LTVLDGPRRAQSQPVK 245

Query:   259 MSLQIMHQVQNRTLPSVAYYRPRQSHAQEPKS-EICVCTMVYNVAKFVKEWVIYHTKIGV 317
             +S++I     +  LPSVA+   R    +  K+ E CVCTM  N A  ++EWV+YH  IGV
Sbjct:   246 VSVRIKG---SGMLPSVAHPIKRPGRIKVSKTFETCVCTMTRNAANVLREWVMYHAGIGV 302

Query:   318 EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCKWMLYI 377
             +++ +YDN S+DD+ + +  L   GYN++   W W KTQEAGF++ AI AK  C W+ +I
Sbjct:   303 QRWFIYDNNSDDDIVSEIKNLENRGYNISRHFWPWIKTQEAGFANCAIRAKSDCDWVAFI 362

Query:   378 DVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSGQKSHPIEGVTQGYNC 437
             DVDEF Y PS                    IG++   C  FGPSG +  P  GVT  Y C
Sbjct:   363 DVDEFFYIPSGQTLTNVIRNHTTTPSSSGEIGEIRTPCHSFGPSGLRDPPRSGVTAAYTC 422

Query:   438 QRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFK 497
             +      +RHKS++  E+++ +L NVVHHF LK  F + ++  S+ ++NHYKYQ W  FK
Sbjct:   423 RM--ALPERHKSIIRPESLNATLINVVHHFHLKEEFAFVDVDKSTMVINHYKYQVWDIFK 480

Query:   498 TKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQGWEFEFCNFTDDRLKLLTQRW-F 556
              KF+RRV+ YVADW++  N  SKDR PGLG  P++P  W   FC  +D  L+     W  
Sbjct:   481 EKFKRRVATYVADWQNEENVGSKDRAPGLGTRPVEPTDWAERFCEVSDIGLR----DWVL 536

Query:   557 GQLTPNGGYKMAWQR 571
              + +     ++ W+R
Sbjct:   537 EKFSDRKTQRLVWER 551

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2086666 AT3G27330 [Arabidopsis thaliana (taxid:3702)]

 Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
 Identities = 153/397 (38%), Positives = 223/397 (56%)

Query:   187 LAYESISTEDD-VVLFVKGVNARSRSRSPQPQDFMCVFG-D------AVKTPVTSCTQEV 238
             L Y+++   D+  V+FVKG+N R   R      + CV+G D       +++ V +  QE+
Sbjct:   169 LVYDAVIDYDNSTVVFVKGLNLRP-GRVADVSRYECVYGWDFAKHNRLIRSDVITAAQEI 227

Query:   239 FRCSHPELTAFTSGTDQ---PIKMSLQIMHQVQNRTLPSVAY-YRPRQSHAQEPKSEICV 294
              RC  P   A   G      P+K+S++I  +     LPS+A   R      ++P  ++CV
Sbjct:   228 VRCRTP--LAVLDGPKAARGPVKVSVRI--KGGTGMLPSIAQPVRIINPPRKKP-FQMCV 282

Query:   295 CTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPK 354
             CTM  N A  ++EWV+YH  IGV+++ +YDN S+DD+   +  L   GYN++   W W K
Sbjct:   283 CTMTRNAAAVLREWVMYHAGIGVQRWFIYDNNSDDDIIAEIENLERRGYNISRHFWPWIK 342

Query:   355 TQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIR 414
             TQEAGFS+ AI AK  C W+ +IDVDEF Y PS    G +   +        SIG++   
Sbjct:   343 TQEAGFSNCAIRAKSDCDWIAFIDVDEFFYIPS----GETLTSVIRNYTTTDSIGEIRTP 398

Query:   415 CLDFGPSGQKSHPIEGVTQGYNCQRWDVSQQRHKSMVLLEAIDDSLDNVVHHFRLKNTFQ 474
             C  FGPSG +S P  GVT GY C+   V  +RHKS++  EA++ +L NVVHHF L++ F 
Sbjct:   399 CHSFGPSGLRSRPRSGVTSGYTCRV--VLPERHKSIIRPEAMNATLINVVHHFHLRDGFT 456

Query:   475 WRELSMSSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSKDRTPGLGFEPIKPQ 534
             + ++     ++NHYKYQ W  FK KF RRV+ YVADW++  N  S+DR PGLG  P++P 
Sbjct:   457 FADMDKDIMVINHYKYQVWEVFKEKFYRRVATYVADWQNEENVGSRDRAPGLGTRPVEPS 516

Query:   535 GWEFEFCNFTDDRLKLLTQRWFGQLTPNGGYKMAWQR 571
              W   FC   D  L+    + F +       ++ W++
Sbjct:   517 DWAERFCEVNDTGLR---DQVFEKFKDKKTQRLVWEK 550

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2152130 GALS2 "AT5G44670" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
 Identities = 54/247 (21%), Positives = 104/247 (42%)

Query:   223 FGDAVKTPVTSCTQEVFRCSHPELT-------AFTSGTDQPIKMSLQIMHQVQNRTLPSV 275
             +G    T V +CT       +P+ T       A T  TD+ I  S+ ++ +  N      
Sbjct:   186 YGRVYTTVVVNCTFPSNTVINPKNTGGTLLLHATTGDTDRNITDSIPVLTETPNTV--DF 243

Query:   276 AYYRPRQSHAQEPKSEICVCTMVYNVA-KFVKEWVIYHTKIGVEK--FILYDNGS-EDDL 331
             A Y       ++     C  ++  N++ + ++EW+ YH +   E+  F+L+D G   +++
Sbjct:   244 ALYESNLRRREKYDYLYCGSSLYGNLSPQRIREWIAYHVRFFGERSHFVLHDAGGITEEV 303

Query:   332 QNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSC--------KWMLYIDVDEFV 383
               V+      G    T+  I  + +  G+ HN     + C        KWM + DVDEF+
Sbjct:   304 FEVLKPWIELGR--VTVHDIREQERFDGYYHNQFMVVNDCLHRYRFMAKWMFFFDVDEFI 361

Query:   384 YSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSGQKSHPIEGVTQGYNCQRWDVS 443
             Y P+       K  + +++  L    Q +I  +    S Q  +  +G  + Y  ++W   
Sbjct:   362 YVPA-------KSSISSVMVSLEEYSQFTIEQMPM--SSQLCYDGDGPARTY--RKWGFE 410

Query:   444 QQRHKSM 450
             +  ++ +
Sbjct:   411 KLAYRDV 417


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      571       538   0.00094  119 3  11 22  0.38    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  629 (67 KB)
  Total size of DFA:  374 KB (2182 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  45.78u 0.15s 45.93t   Elapsed:  00:00:03
  Total cpu time:  45.78u 0.15s 45.93t   Elapsed:  00:00:03
  Start:  Mon May 20 18:51:34 2013   End:  Mon May 20 18:51:37 2013

GO:0005737 "cytoplasm" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0042546 "cell wall biogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	571
pfam01697	266	pfam01697, Glyco_transf_92, Glycosyltransferase fa	4e-23
pfam13704	97	pfam13704, Glyco_tranf_2_4, Glycosyl transferase f	7e-10
pfam00535	168	pfam00535, Glycos_transf_2, Glycosyl transferase f	0.003

>gnl|CDD|216651 pfam01697, Glyco_transf_92, Glycosyltransferase family 92

 Score = 98.7 bits (246), Expect = 4e-23
 Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 30/235 (12%)

Query: 292 ICVCTMVYNVAKF--VKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLL 349
           +CV  +  N AK+  ++E++ YH   G   F +Y +   +    V+ E    GY V   L
Sbjct: 5   VCVAPLFGNEAKWLQLQEFIEYHKLQGATHFHIYLHSITEYDYKVLKEYEKTGY-VE--L 61

Query: 350 WIWP--------------KTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSG-PS 394
             WP              + Q A  +   +  K + KW+ ++D+DE +   +    G   
Sbjct: 62  IPWPPGPPYLEPNSNVEWRNQAAAQNDCLLRYKEAAKWIAFLDLDERLVPRNAPTYGEEF 121

Query: 395 KHLLKALIPQLHSIGQVSIR-----CLDFGPSGQKSHPIEGVTQGYNCQRWDV---SQQR 446
             LL++L     SIG    R        F PS  ++ P E VT  Y+C+  +     +  
Sbjct: 122 LDLLRSLPD--ISIGSYGFRNQWVVKYSFLPSFFENSPSELVTSLYSCRTRETGLEQEWH 179

Query: 447 HKSMVLLEAIDDSLDNVVHHFRLKNTFQWRELSMSSALVNHYKYQAWSEFKTKFR 501
            K +V  E ++    +    F  K   +   +     ++ HY+ Q   E   K R
Sbjct: 180 KKCIVRPEKVNSMWIHFPTKFYNKEGNKILHVKKPEGVIRHYRDQEDGEDLEKVR 234

Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily. Length = 266

>gnl|CDD|222329 pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2

 Score = 55.7 bits (135), Expect = 7e-10
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 299 YNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEA 358
            N A F+ E++ +H  +G + F++ DN S+D    ++  L  D   + T L      ++ 
Sbjct: 1   RNEAPFLPEFLAHHRALGFDHFLIVDNDSDDGTAEILAAL-PDVGVIRTDLSYRDARRQV 59

Query: 359 GFSHNAIHAKHSCKWMLYIDVDEFVYSP 386
            + +  I       W+L +D DEF+  P
Sbjct: 60  DWLNALIRRYADGDWVLVLDADEFLVYP 87

Members of this family of prokaryotic proteins include putative glucosyltransferases,. Length = 97

>gnl|CDD|215980 pfam00535, Glycos_transf_2, Glycosyl transferase family 2

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 15/103 (14%)

Query: 292 ICVCTMVYNVAKFVKEWV--IYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLL 349
           + + T  YN  K+++E +  + +      + I+ D+GS D    +  E   +   V    
Sbjct: 2   VIIPT--YNEEKYLEETLESLLNQTYKNFEIIVVDDGSTDGTVEIAEEYAKNDPRVR--- 56

Query: 350 WIWPKTQEAGFSHN---AI-HAKHSCKWMLYIDVDEFVYSPSW 388
            +    +  G +      +  A     ++ ++D D+   +P W
Sbjct: 57  -VIRLEENLGKAAARNAGLKLATG--DYIAFLDADD-EVAPDW 95

Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Length = 168

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	571
PF01697	285	Glyco_transf_92: Glycosyltransferase family 92; In	99.93
PF13704	97	Glyco_tranf_2_4: Glycosyl transferase family 2	99.7
cd02511	229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	99.51
KOG4735	472	consensus Extracellular protein with conserved cys	98.81
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	98.61
COG0463	291	WcaA Glycosyltransferases involved in cell wall bi	98.34
PRK10063	248	putative glycosyl transferase; Provisional	98.33
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	98.32
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	98.29
PRK10073	328	putative glycosyl transferase; Provisional	98.21
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	98.21
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	98.17
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	98.13
PRK11204	420	N-glycosyltransferase; Provisional	98.13
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	98.12
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	98.11
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	98.11
cd04188	211	DPG_synthase DPG_synthase is involved in protein N	98.09
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	98.09
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	98.07
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	98.06
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	98.06
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	98.03
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	98.02
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	98.01
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	98.0
cd06437	232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	97.98
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	97.98
cd06438	183	EpsO_like EpsO protein participates in the methano	97.94
PTZ00260	333	dolichyl-phosphate beta-glucosyltransferase; Provi	97.92
cd06436	191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	97.91
PRK10714	325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	97.89
PRK14583	444	hmsR N-glycosyltransferase; Provisional	97.88
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	97.87
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	97.84
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	97.82
cd06913	219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	97.79
PRK10018	279	putative glycosyl transferase; Provisional	97.79
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	97.79
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	97.71
PRK13915	306	putative glucosyl-3-phosphoglycerate synthase; Pro	97.71
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	97.67
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	97.64
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	97.55
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	97.48
cd00761	156	Glyco_tranf_GTA_type Glycosyltransferase family A	97.43
cd02522	221	GT_2_like_a GT_2_like_a represents a glycosyltrans	97.37
PRK11498	852	bcsA cellulose synthase catalytic subunit; Provisi	97.09
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	97.07
COG1216	305	Predicted glycosyltransferases [General function p	96.65
COG1215	439	Glycosyltransferases, probably involved in cell wa	96.46
PRK14716	504	bacteriophage N4 adsorption protein B; Provisional	96.45
TIGR03030	713	CelA cellulose synthase catalytic subunit (UDP-for	96.45
PF06306	347	CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (	96.29
PRK05454	691	glucosyltransferase MdoH; Provisional	95.74
cd04190	244	Chitin_synth_C C-terminal domain of Chitin Synthas	95.32
cd04191	254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	95.18
PF10111	281	Glyco_tranf_2_2: Glycosyltransferase like family 2	93.55
KOG2977	323	consensus Glycosyltransferase [General function pr	93.33
KOG2978	238	consensus Dolichol-phosphate mannosyltransferase [	92.49
cd02514	334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	91.17
PRK11234	727	nfrB bacteriophage N4 adsorption protein B; Provis	90.7
PF03452	269	Anp1: Anp1; InterPro: IPR005109 The members of thi	88.11

>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function

Probab=99.93  E-value=1.9e-25  Score=227.19  Aligned_cols=199  Identities=28%  Similarity=0.485  Sum_probs=150.4

Q ss_pred             CceEEEEEEecchHH--HHHHHHHHhhhcCccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecC---------------
Q 008286          289 KSEICVCTMVYNVAK--FVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWI---------------  351 (571)
Q Consensus       289 k~~IcVctivkNEa~--~L~EwIeyH~~lGvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp---------------  351 (571)
                      ++.+|+.++++||.+  .|.|||+||+++|+++|+||++++++.+.++|+.|.+.|. |++++|+               
T Consensus         2 ~~~vCv~pl~~~~~~~~~l~e~ie~~~~~G~~~~~~Y~~~~~~~~~~vL~~Y~~~g~-v~~~~w~~~~~~~~~~~~~~~~   80 (285)
T PF01697_consen    2 DFVVCVSPLFGNEDDWLQLIEWIEYHRLLGVDHFYFYDNSSSPSVRKVLKEYERSGY-VEVIPWPLRPKFPDFPSPFPDP   80 (285)
T ss_pred             cEEEEccchhcccccHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHhHHHHhhcCe-EEEEEcccccccCCcccchhhh
Confidence            456788889999965  8999999999999999999999999999999999999998 9999997               


Q ss_pred             ----CchhHHHHHHHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccC--CccEEEEEeeee-----cC
Q 008286          352 ----WPKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLH--SIGQVSIRCLDF-----GP  420 (571)
Q Consensus       352 ----~~~~Q~aa~ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p--~i~~i~~~w~~F-----g~  420 (571)
                          +..+|..+++||++|++..++||+|+|+||||+|...   +....++.++++..+  .++.+.+....+     ++
T Consensus        81 ~~~~~~~~q~~a~~DCl~r~~~~~~~v~f~DiDE~lvP~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  157 (285)
T PF01697_consen   81 NSSVERRGQIAAYNDCLLRYRYRAKWVAFIDIDEFLVPTNA---PTYPEEFEDLLREFPNISAGAYSFRNSWFYKYEFGP  157 (285)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhceEEEEeccccEEEeccc---cchhhHHHHHHhhccccceEEEEEeEEEEEecccCc
Confidence                1247899999999999999999999999999999853   223478889988874  455555544433     33


Q ss_pred             CCccccCCCCccccccccccccc------CCCceEEEeCCceeccccccceeee-ecC--CceeeeecCceeEEEecccC
Q 008286          421 SGQKSHPIEGVTQGYNCQRWDVS------QQRHKSMVLLEAIDDSLDNVVHHFR-LKN--TFQWRELSMSSALVNHYKYQ  491 (571)
Q Consensus       421 sg~~~~p~~~vi~~yt~R~~~~~------~~r~KsIVRP~~V~~sl~n~VHh~~-l~~--g~~~~~V~~~~a~I~HYr~r  491 (571)
                      ++....+.+.+...+.++..+..      ..+.|+||||+.|..+   ++|+.. ...  +.....++...|.|+||+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~IvrP~~v~~~---~~H~~~~~~~~~~~~~~~v~~~~~~i~HYr~~  234 (285)
T PF01697_consen  158 SFYESSPSQLVSSLYFKRFRKTGVKKTRPGHRSKSIVRPEKVNSM---GIHHPWKFYNSSGYKILHVPPEIALINHYRDK  234 (285)
T ss_pred             cccccchHHhhhcceeeeecccccccccccccceeecChhHeEEE---ecccceeecCCCCceEEEeCcceEEEeccccC
Confidence            33222232333333333332111      1236999999999876   577663 233  56667788999999999998


Q ss_pred             CHH
Q 008286          492 AWS  494 (571)
Q Consensus       492 S~e  494 (571)
                      ++.
T Consensus       235 ~~~  237 (285)
T PF01697_consen  235 SWP  237 (285)
T ss_pred             ccc
Confidence            844

The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.

>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2

Probab=99.70  E-value=4.4e-17  Score=140.69  Aligned_cols=95  Identities=26%  Similarity=0.537  Sum_probs=73.0

Q ss_pred             cchHHHHHHHHHHhhhcCccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCC--chhHHHHHHHHHHHhcCCCcEEEE
Q 008286          299 YNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIW--PKTQEAGFSHNAIHAKHSCKWMLY  376 (571)
Q Consensus       299 kNEa~~L~EwIeyH~~lGvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~--~~~Q~aa~ndcl~r~~~~~dWVlf  376 (571)
                      |||+.+|.+||+||+.+|+++|+||||+|+|+|.++|+.+.+.++  .....+.  ...|....+.|+. .....+|+++
T Consensus         1 rne~~~L~~wl~~~~~lG~d~i~i~d~~s~D~t~~~l~~~~~v~i--~~~~~~~~~~~~~~~~~~~~~~-~~~~~dWvl~   77 (97)
T PF13704_consen    1 RNEADYLPEWLAHHLALGVDHIYIYDDGSTDGTREILRALPGVGI--IRWVDPYRDERRQRAWRNALIE-RAFDADWVLF   77 (97)
T ss_pred             CChHHHHHHHHHHHHHcCCCEEEEEECCCCccHHHHHHhCCCcEE--EEeCCCccchHHHHHHHHHHHH-hCCCCCEEEE
Confidence            799999999999999999999999999999999999999965433  2222333  2344444455544 4468899999


Q ss_pred             ecCCceeecCCCCCCCCcHHHHHHhh
Q 008286          377 IDVDEFVYSPSWHDSGPSKHLLKALI  402 (571)
Q Consensus       377 iDaDEfL~p~~~~~~~~~~~~L~dlL  402 (571)
                      +|+|||+.++..      ..+|+++|
T Consensus        78 ~D~DEfl~~~~~------~~~l~~~L   97 (97)
T PF13704_consen   78 LDADEFLVPPPG------RRSLRDFL   97 (97)
T ss_pred             EeeeEEEecCCC------CCCHHHhC
Confidence            999999999732      25677765

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide

Probab=99.51  E-value=5.5e-13  Score=132.20  Aligned_cols=187  Identities=18%  Similarity=0.167  Sum_probs=115.8

Q ss_pred             EEEEEEecchHHHHHHHHHHhhhcCccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcCCC
Q 008286          292 ICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSC  371 (571)
Q Consensus       292 IcVctivkNEa~~L~EwIeyH~~lGvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~~~  371 (571)
                      |+|+++++||+..|.++|+.-..+ .++|+|+|++|+|+|.++++.+.   ..|....|.+.+.|   .|.++.  ....
T Consensus         2 isvii~~~Ne~~~l~~~l~sl~~~-~~eiivvD~gStD~t~~i~~~~~---~~v~~~~~~g~~~~---~n~~~~--~a~~   72 (229)
T cd02511           2 LSVVIITKNEERNIERCLESVKWA-VDEIIVVDSGSTDRTVEIAKEYG---AKVYQRWWDGFGAQ---RNFALE--LATN   72 (229)
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcc-cCEEEEEeCCCCccHHHHHHHcC---CEEEECCCCChHHH---HHHHHH--hCCC
Confidence            788899999999999999985332 38999999999999999999763   33443344444444   354443  3467


Q ss_pred             cEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEeeeecCCCccccCC---CCcccccccccccccCCCce
Q 008286          372 KWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFGPSGQKSHPI---EGVTQGYNCQRWDVSQQRHK  448 (571)
Q Consensus       372 dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w~~Fg~sg~~~~p~---~~vi~~yt~R~~~~~~~r~K  448 (571)
                      +||+++|+||++.+.       ....+.+.+.+.+. ..+.+.......+......+   ....+.|.         +.+
T Consensus        73 d~vl~lDaD~~~~~~-------~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~~---------~~~  135 (229)
T cd02511          73 DWVLSLDADERLTPE-------LADEILALLATDDY-DGYYVPRRNFFLGRWIRHGGWYPDRQLRLFR---------RGK  135 (229)
T ss_pred             CEEEEEeCCcCcCHH-------HHHHHHHHHhCCCC-cEEEEEEEEEEcCeeeecCCCCCCceEEEEE---------CCC
Confidence            899999999999874       34556666665443 44555544443332222111   11111111         112


Q ss_pred             EEEeCCceeccccccceeeeecCCceeeeecC-ceeEEEecccCCHHHHHHHHhhchhhHHHHHHHHcCCCCC
Q 008286          449 SMVLLEAIDDSLDNVVHHFRLKNTFQWRELSM-SSALVNHYKYQAWSEFKTKFRRRVSAYVADWRDATNPNSK  520 (571)
Q Consensus       449 sIVRP~~V~~sl~n~VHh~~l~~g~~~~~V~~-~~a~I~HYr~rS~e~f~~K~~Rr~s~y~~dw~~~~n~~~k  520 (571)
                      ..+...        .+|......+.    +.. ..+.+.||.+.+.+.+..|.+|    |...++.+...++|
T Consensus       136 ~~~~~~--------~vhe~~~~~~~----~~~~~~~~~~H~~~~~~~~~~~K~~r----y~~~~a~~~~~~~~  192 (229)
T cd02511         136 ARFEDG--------RVHEQVVVDGG----VGIVLKGDILHYGYKSLEEFLEKHNR----YSSLEAKDLAAKGK  192 (229)
T ss_pred             eEECCC--------cccceEEeCCC----eeecCCCceeCCCCCCHHHHHHHHHH----HHHHHHHHHHHcCC
Confidence            222212        24443322221    112 5678999999999999999999    76666655544444

UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.

>KOG4735 consensus Extracellular protein with conserved cysteines [Function unknown]

Probab=98.81  E-value=3.7e-10  Score=124.11  Aligned_cols=272  Identities=10%  Similarity=0.033  Sum_probs=159.8

Q ss_pred             EEEecCCceEEEEEEeecCCCCCCCCCCceEEEEeec-------ccccceeeceeeEEcCCCCCCCCCCCCCCCeEEEEE
Q 008286          190 ESISTEDDVVLFVKGVNARSRSRSPQPQDFMCVFGDA-------VKTPVTSCTQEVFRCSHPELTAFTSGTDQPIKMSLQ  262 (571)
Q Consensus       190 ~a~~~~~~~vv~v~gi~~r~~~~~~~~~~~~C~f~~~-------~~t~~~~~~q~vi~C~~P~~~~~~~~~~~~i~VSl~  262 (571)
                      .|+...+..+|..+.           +..++|+++++       ....++..+..++.|+-.  ..       .+.++++
T Consensus       109 ~a~~~~~~~vv~~~s-----------p~~v~~~w~d~~~~~~~~~~~~s~~~~~~~vs~~~~--~~-------~~~~~~~  168 (472)
T KOG4735|consen  109 SARYSAPKPVVVCIS-----------PQFVYEQWQDFLRQEHVSKRFGATHLHLYVVSCPES--YF-------ALLKEYE  168 (472)
T ss_pred             ccccCCCCcEEEEec-----------chHHHhhHHhhhhheehhhhcCCeeEEEEEEEehHH--HH-------HHHHHHH
Confidence            356666654444443           24599998872       234444567789999933  32       2222233


Q ss_pred             Eecc--cccccccceeeecCCCCCCCCCCceEEEEEEecchHHHHHHHHHHhhhcCc-cEEEEE-EcCCChhHHHHHHhh
Q 008286          263 IMHQ--VQNRTLPSVAYYRPRQSHAQEPKSEICVCTMVYNVAKFVKEWVIYHTKIGV-EKFILY-DNGSEDDLQNVVNEL  338 (571)
Q Consensus       263 ~~~~--~~~~~~P~v~~~~~~~~~~~~~k~~IcVctivkNEa~~L~EwIeyH~~lGv-d~f~IY-Dn~StD~t~eIL~~y  338 (571)
                      ..+.  .-...+|...+...  .....++..+|+-.+++++.++|..|+|+++.+|+ +.+.|+ -.+.+++..++++.|
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~--~p~~ep~~~vc~~~~~g~~~d~L~~~~E~~k~~g~~~~~di~~~~~~~~Y~~e~l~~y  246 (472)
T KOG4735|consen  169 KLGNYVTLPPWLPLKFRNTD--EPYHEPNLNVELRNQAGAETDCLLQYKEAAKFIGFFDLDDILIPRNANTYDEEFLREY  246 (472)
T ss_pred             hcCCccccCCCcccccCCCC--CCccCcccceEecccchhhhhHHHHHHHHHHHhccccHhheeeeccCchHHHHHHHHh
Confidence            3210  00123333322211  11123447788888999999999889999999999 888888 667778999999999


Q ss_pred             cCCCcEEEEEe-----cCC-chhHHHHHHHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhcc--CCccE
Q 008286          339 NGDGYNVTTLL-----WIW-PKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQL--HSIGQ  410 (571)
Q Consensus       339 ~~~G~~Vt~i~-----Wp~-~~~Q~aa~ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~--p~i~~  410 (571)
                      .+.|. ++.+.     |.. ...|...+|||.+|++..++|++++|+||.+...+.     ...++..++...  +..+.
T Consensus       247 ~~~~~-v~~~~~~~~~~~~~~~~~~~~~~dC~~r~~~~s~~~~~~dide~~~~~~p-----~~~~~~~~~~~~~~~~~~~  320 (472)
T KOG4735|consen  247 VGSGN-IEVIFYQKREHRTVKTWELLQFNDCSLRSLFSSKWSANTDIDEGKVVVRP-----ERLNSTWIHRSINNPKKAE  320 (472)
T ss_pred             hcCCC-eeEEEeeeeeeeeeecccccccccccHHHHhhcceecccccccceeeccc-----cccceeeeeecccCCccce
Confidence            99886 55443     322 245668899999999999999999999999887642     112233333332  22332


Q ss_pred             --EEEEeeeecCCCccccCCCC--cccccccc-cccc----c-CCCceEEEeCCceeccccccceee-eecCCceeeeec
Q 008286          411 --VSIRCLDFGPSGQKSHPIEG--VTQGYNCQ-RWDV----S-QQRHKSMVLLEAIDDSLDNVVHHF-RLKNTFQWRELS  479 (571)
Q Consensus       411 --i~~~w~~Fg~sg~~~~p~~~--vi~~yt~R-~~~~----~-~~r~KsIVRP~~V~~sl~n~VHh~-~l~~g~~~~~V~  479 (571)
                        ....|.........+...+.  .......+ ..+.    . ....|+|.++..|..+   .+|.. ...+|.....+.
T Consensus       321 ~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~ts~~~~~~~~~K~i~~~~~v~~~---~~h~~~~~~~~~~~~~~~  397 (472)
T KOG4735|consen  321 LLFVSSNVIIHKQLPAKFENGWLQLPEEMEFLKYNETSQPINPSDNLKCIDRDEKVRML---TIHEISKLLPGLPKTDVY  397 (472)
T ss_pred             eEeeecceeEEeeccccccCcccccceeccceeccCcccccCcccccHHHHHHHHHHHh---cchHHHHHhcCCCccccc
Confidence              33355554333222222221  11111111 1110    1 2236999999987543   56665 234444334456


Q ss_pred             CceeEEEecccCC
Q 008286          480 MSSALVNHYKYQA  492 (571)
Q Consensus       480 ~~~a~I~HYr~rS  492 (571)
                      ...+.+.||+.-.
T Consensus       398 ~~i~~~~~yr~~~  410 (472)
T KOG4735|consen  398 TPIVFKCYYRSFY  410 (472)
T ss_pred             HHHHHHHhhhhhh
Confidence            6777888886533

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.61  E-value=8.5e-07  Score=80.27  Aligned_cols=104  Identities=18%  Similarity=0.198  Sum_probs=76.2

Q ss_pred             EEEEEecchHHHHHHHHHHhhhc--CccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcCC
Q 008286          293 CVCTMVYNVAKFVKEWVIYHTKI--GVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHS  370 (571)
Q Consensus       293 cVctivkNEa~~L~EwIeyH~~l--Gvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~~  370 (571)
                      ||++.++|++++|.++|+..+.+  ...+|+|+||+|+|++.++++.+.+.+..++++.-+...+...++|.++..+  .
T Consensus         1 Svvip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~g~~~~~n~~~~~a--~   78 (169)
T PF00535_consen    1 SVVIPTYNEAEYLERTLESLLKQTDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENLGFSAARNRGIKHA--K   78 (169)
T ss_dssp             EEEEEESS-TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCSHHHHHHHHHHHH----
T ss_pred             CEEEEeeCCHHHHHHHHHHHhhccCCCEEEEEecccccccccccccccccccccccccccccccccccccccccccc--c
Confidence            57788999999999999987776  4569999999999999999999976333477777666556666777777655  4


Q ss_pred             CcEEEEecCCceeecCCCCCCCCcHHHHHHhhhcc
Q 008286          371 CKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQL  405 (571)
Q Consensus       371 ~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~  405 (571)
                      .+|++++|.|.++.+.       .-..+.+.+.+.
T Consensus        79 ~~~i~~ld~D~~~~~~-------~l~~l~~~~~~~  106 (169)
T PF00535_consen   79 GEYILFLDDDDIISPD-------WLEELVEALEKN  106 (169)
T ss_dssp             SSEEEEEETTEEE-TT-------HHHHHHHHHHHC
T ss_pred             eeEEEEeCCCceEcHH-------HHHHHHHHHHhC
Confidence            4599999999999985       234455555543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=98.34  E-value=3.4e-06  Score=75.76  Aligned_cols=95  Identities=18%  Similarity=0.249  Sum_probs=72.8

Q ss_pred             CceEEEEEEecchHHHHHHHHHHhhhcCcc--EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHH
Q 008286          289 KSEICVCTMVYNVAKFVKEWVIYHTKIGVE--KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIH  366 (571)
Q Consensus       289 k~~IcVctivkNEa~~L~EwIeyH~~lGvd--~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r  366 (571)
                      .+.++|++.++|+++.|.+.|+.-..+...  +++|.|++|+|+|.++++.+.+....+.....+...+...+++..+..
T Consensus         2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   81 (291)
T COG0463           2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKDFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNGGLGAARNAGLEY   81 (291)
T ss_pred             CccEEEEEeccchhhhHHHHHHHHHhhhhcceEEEEEeCCCCCChHHHHHHHhhhcceEEEeecccCCChHHHHHhhHHh
Confidence            367889999999999999999987665432  699999999999999999998753113333334455666677777665


Q ss_pred             hcCCCcEEEEecCCceeecC
Q 008286          367 AKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       367 ~~~~~dWVlfiDaDEfL~p~  386 (571)
                      ...  +|++++|+|+. .+.
T Consensus        82 ~~~--~~~~~~d~d~~-~~~   98 (291)
T COG0463          82 ARG--DYIVFLDADDQ-HPP   98 (291)
T ss_pred             ccC--CEEEEEccCCC-CCH
Confidence            544  99999999999 775

>PRK10063 putative glycosyl transferase; Provisional

Probab=98.33  E-value=1.1e-05  Score=81.78  Aligned_cols=92  Identities=15%  Similarity=0.209  Sum_probs=69.0

Q ss_pred             eEEEEEEecchHHHHHHHHHHhhhc----Cc-cEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHH
Q 008286          291 EICVCTMVYNVAKFVKEWVIYHTKI----GV-EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAI  365 (571)
Q Consensus       291 ~IcVctivkNEa~~L~EwIeyH~~l----Gv-d~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~  365 (571)
                      .++|++.++|+++.|.++|+.-..+    +. -+++|.|++|+|+|.++++.+.+.. .+.++.-+ ..+...+.|..+.
T Consensus         2 ~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~-~i~~i~~~-~~G~~~A~N~Gi~   79 (248)
T PRK10063          2 LLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIF-NLRFVSEP-DNGIYDAMNKGIA   79 (248)
T ss_pred             eEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccC-CEEEEECC-CCCHHHHHHHHHH
Confidence            6889999999999999998885421    22 3799999999999999999986432 24444323 3355566776665


Q ss_pred             HhcCCCcEEEEecCCceeecC
Q 008286          366 HAKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       366 r~~~~~dWVlfiDaDEfL~p~  386 (571)
                      .+  ..+||+++|+|.++.+.
T Consensus        80 ~a--~g~~v~~ld~DD~~~~~   98 (248)
T PRK10063         80 MA--QGRFALFLNSGDIFHQD   98 (248)
T ss_pred             Hc--CCCEEEEEeCCcccCcC
Confidence            44  57999999999999874

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.32  E-value=8e-06  Score=78.15  Aligned_cols=92  Identities=15%  Similarity=0.200  Sum_probs=67.4

Q ss_pred             EEEEEecchHHHHHHHHHHhhhcCc--cEEEEEEcCCChhHHHHHHhhcCCC-cEEEEEecCCchhHHHHHHHHHHHhcC
Q 008286          293 CVCTMVYNVAKFVKEWVIYHTKIGV--EKFILYDNGSEDDLQNVVNELNGDG-YNVTTLLWIWPKTQEAGFSHNAIHAKH  369 (571)
Q Consensus       293 cVctivkNEa~~L~EwIeyH~~lGv--d~f~IYDn~StD~t~eIL~~y~~~G-~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~  369 (571)
                      +|++.++|++++|.++|+.-..+-.  -+++|.|++|+|+|.++++.+.++. ..+..+.-....+...++|.++.  ..
T Consensus         1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~--~~   78 (214)
T cd04196           1 AVLMATYNGEKYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQ--AA   78 (214)
T ss_pred             CEEEEecCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHH--hC
Confidence            3667789999999999998655432  3899999999999999999997653 12444433334444455565543  35


Q ss_pred             CCcEEEEecCCceeecC
Q 008286          370 SCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       370 ~~dWVlfiDaDEfL~p~  386 (571)
                      ..+||+++|.|.++.|.
T Consensus        79 ~g~~v~~ld~Dd~~~~~   95 (214)
T cd04196          79 DGDYVFFCDQDDIWLPD   95 (214)
T ss_pred             CCCEEEEECCCcccChh
Confidence            78999999999998863

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=98.29  E-value=1.5e-05  Score=79.12  Aligned_cols=95  Identities=13%  Similarity=0.188  Sum_probs=70.5

Q ss_pred             CCCceEEEEEEecchHHHHHHHHHHhhhcCc----cEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHH
Q 008286          287 EPKSEICVCTMVYNVAKFVKEWVIYHTKIGV----EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSH  362 (571)
Q Consensus       287 ~~k~~IcVctivkNEa~~L~EwIeyH~~lGv----d~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~nd  362 (571)
                      .....++|+..++||+..|.++|+.-..+-.    -+++|.|++|+|++.++++.+.+.  .+.++.-+...+...+.|.
T Consensus        26 ~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~~g~~~a~n~  103 (251)
T cd06439          26 AYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRFPERRGKAAALNR  103 (251)
T ss_pred             CCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEcCCCCChHHHHHH
Confidence            3455799999999999999999988544321    279999999999999999999765  2444433333344455666


Q ss_pred             HHHHhcCCCcEEEEecCCceeec
Q 008286          363 NAIHAKHSCKWMLYIDVDEFVYS  385 (571)
Q Consensus       363 cl~r~~~~~dWVlfiDaDEfL~p  385 (571)
                      ++..+  ..|||+++|+|.++.+
T Consensus       104 gi~~a--~~d~i~~lD~D~~~~~  124 (251)
T cd06439         104 ALALA--TGEIVVFTDANALLDP  124 (251)
T ss_pred             HHHHc--CCCEEEEEccccCcCH
Confidence            66544  4599999999999975

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>PRK10073 putative glycosyl transferase; Provisional

Probab=98.21  E-value=2.1e-05  Score=83.05  Aligned_cols=94  Identities=15%  Similarity=0.195  Sum_probs=73.5

Q ss_pred             ceEEEEEEecchHHHHHHHHHHhhhcCc--cEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHh
Q 008286          290 SEICVCTMVYNVAKFVKEWVIYHTKIGV--EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHA  367 (571)
Q Consensus       290 ~~IcVctivkNEa~~L~EwIeyH~~lGv--d~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~  367 (571)
                      ..|+|++.++|++++|.++|+.-..+-.  -+++|.|+||+|++.++++.|.+..-.|.++.- ...+...+.|.++.. 
T Consensus         6 p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~-~n~G~~~arN~gl~~-   83 (328)
T PRK10073          6 PKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQ-ANAGVSVARNTGLAV-   83 (328)
T ss_pred             CeEEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEC-CCCChHHHHHHHHHh-
Confidence            4689998899999999999998665533  389999999999999999999764333555543 345666677777654 


Q ss_pred             cCCCcEEEEecCCceeecC
Q 008286          368 KHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       368 ~~~~dWVlfiDaDEfL~p~  386 (571)
                       ...+||+|+|+|.++.|.
T Consensus        84 -a~g~yi~flD~DD~~~p~  101 (328)
T PRK10073         84 -ATGKYVAFPDADDVVYPT  101 (328)
T ss_pred             -CCCCEEEEECCCCccChh
Confidence             467999999999998874

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=98.21  E-value=1.9e-05  Score=78.60  Aligned_cols=94  Identities=10%  Similarity=0.122  Sum_probs=69.0

Q ss_pred             eEEEEEEecchHHHHHHHHHHhhhcCcc----EEEEEEcCCChhHHHHHHhhcCCC-cEEEEEecCCchhHHHHHHHHHH
Q 008286          291 EICVCTMVYNVAKFVKEWVIYHTKIGVE----KFILYDNGSEDDLQNVVNELNGDG-YNVTTLLWIWPKTQEAGFSHNAI  365 (571)
Q Consensus       291 ~IcVctivkNEa~~L~EwIeyH~~lGvd----~f~IYDn~StD~t~eIL~~y~~~G-~~Vt~i~Wp~~~~Q~aa~ndcl~  365 (571)
                      .++|++-++||++.|.+.|+.-..+-..    +|+|+|++|+|+|.++++.+.... ..|..++-....++..+.|.++.
T Consensus         2 ~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~g~~   81 (241)
T cd06427           2 VYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQPRTKPKACNYALA   81 (241)
T ss_pred             eEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCCCchHHHHHHHHH
Confidence            4788888999999999999986554332    588899999999999999985422 22333222233456667777766


Q ss_pred             HhcCCCcEEEEecCCceeecC
Q 008286          366 HAKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       366 r~~~~~dWVlfiDaDEfL~p~  386 (571)
                      .+  ..+||+++|+|-.+.+.
T Consensus        82 ~a--~gd~i~~~DaD~~~~~~  100 (241)
T cd06427          82 FA--RGEYVVIYDAEDAPDPD  100 (241)
T ss_pred             hc--CCCEEEEEcCCCCCChH
Confidence            43  56999999999998864

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=98.17  E-value=3.4e-05  Score=72.47  Aligned_cols=89  Identities=13%  Similarity=0.137  Sum_probs=65.4

Q ss_pred             EEEEEecchHHHHHHHHHHhhhcCcc--EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcCC
Q 008286          293 CVCTMVYNVAKFVKEWVIYHTKIGVE--KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHS  370 (571)
Q Consensus       293 cVctivkNEa~~L~EwIeyH~~lGvd--~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~~  370 (571)
                      +|++.++|+++.|.++|+.-..+...  +++|+||+|+|++.++++.+....  +.++. ....+-..+.|.++..  ..
T Consensus         1 sivi~~~n~~~~l~~~l~sl~~q~~~~~evivvDd~s~d~~~~~~~~~~~~~--~~~~~-~~~~g~~~a~n~~~~~--a~   75 (202)
T cd06433           1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKI--TYWIS-EPDKGIYDAMNKGIAL--AT   75 (202)
T ss_pred             CEEEeccchHHHHHHHHHHHHhCCCCCceEEEEeCCCCccHHHHHHHhHhhc--EEEEe-cCCcCHHHHHHHHHHH--cC
Confidence            35667899999999999987666554  799999999999999999987641  22222 2222334455666543  36


Q ss_pred             CcEEEEecCCceeecC
Q 008286          371 CKWMLYIDVDEFVYSP  386 (571)
Q Consensus       371 ~dWVlfiDaDEfL~p~  386 (571)
                      .+||+++|.|.++.+.
T Consensus        76 ~~~v~~ld~D~~~~~~   91 (202)
T cd06433          76 GDIIGFLNSDDTLLPG   91 (202)
T ss_pred             CCEEEEeCCCcccCch
Confidence            7999999999999985

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=98.13  E-value=1.9e-05  Score=74.00  Aligned_cols=89  Identities=18%  Similarity=0.110  Sum_probs=67.6

Q ss_pred             EEEecchHHHHHHHHHHhhhc----CccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcCC
Q 008286          295 CTMVYNVAKFVKEWVIYHTKI----GVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHS  370 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~l----Gvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~~  370 (571)
                      ++.++|+++.|.++|+....+    ...+++|.||+|+|++.++++.+.++...+..+..+...+...++|..+..+.. 
T Consensus         2 ii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a~g-   80 (185)
T cd04179           2 VIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFGKGAAVRAGFKAARG-   80 (185)
T ss_pred             eecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCCccHHHHHHHHHhcC-
Confidence            456899999999999887766    367999999999999999999987654324444444444455666767665544 


Q ss_pred             CcEEEEecCCceeec
Q 008286          371 CKWMLYIDVDEFVYS  385 (571)
Q Consensus       371 ~dWVlfiDaDEfL~p  385 (571)
                       +|++++|.|..+.+
T Consensus        81 -d~i~~lD~D~~~~~   94 (185)
T cd04179          81 -DIVVTMDADLQHPP   94 (185)
T ss_pred             -CEEEEEeCCCCCCH
Confidence             99999999998865

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>PRK11204 N-glycosyltransferase; Provisional

Probab=98.13  E-value=2.8e-05  Score=83.99  Aligned_cols=115  Identities=13%  Similarity=0.188  Sum_probs=81.5

Q ss_pred             CceEEEEEEecchHHHHHHHHHHhhhcCc--cEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHH
Q 008286          289 KSEICVCTMVYNVAKFVKEWVIYHTKIGV--EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIH  366 (571)
Q Consensus       289 k~~IcVctivkNEa~~L~EwIeyH~~lGv--d~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r  366 (571)
                      ...++|++.++||+..|.++|+.-..+..  -+++|.|++|+|+|.++++.+.+...+++.+..+...+...+.|.++..
T Consensus        53 ~p~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~Gka~aln~g~~~  132 (420)
T PRK11204         53 YPGVSILVPCYNEGENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAENQGKANALNTGAAA  132 (420)
T ss_pred             CCCEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCCCCHHHHHHHHHHH
Confidence            34688888899999999999998555432  3899999999999999999886643335555544444555667776654


Q ss_pred             hcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEE
Q 008286          367 AKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVS  412 (571)
Q Consensus       367 ~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~  412 (571)
                        ...||++++|+|..+.+.       .-..+.+.+.+.|+++.+.
T Consensus       133 --a~~d~i~~lDaD~~~~~d-------~L~~l~~~~~~~~~v~~v~  169 (420)
T PRK11204        133 --ARSEYLVCIDGDALLDPD-------AAAYMVEHFLHNPRVGAVT  169 (420)
T ss_pred             --cCCCEEEEECCCCCCChh-------HHHHHHHHHHhCCCeEEEE
Confidence              468999999999987653       2233334444456676664

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.12  E-value=2.8e-05  Score=74.48  Aligned_cols=91  Identities=20%  Similarity=0.226  Sum_probs=67.1

Q ss_pred             EEEecchHHHHHHHHHHhhhcC--ccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHh-cCCC
Q 008286          295 CTMVYNVAKFVKEWVIYHTKIG--VEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHA-KHSC  371 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~lG--vd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~-~~~~  371 (571)
                      ++.++|+++.|.++|+.-..+-  -.+++|+|++|+|+|.++++.+.+.- .+..+..+...+...++|.++..+ ....
T Consensus         2 iI~~~n~~~~l~~~l~sl~~q~~~~~eiiivD~~s~d~t~~~~~~~~~~~-~i~~~~~~~n~g~~~~~n~~~~~a~~~~~   80 (202)
T cd04185           2 VVVTYNRLDLLKECLDALLAQTRPPDHIIVIDNASTDGTAEWLTSLGDLD-NIVYLRLPENLGGAGGFYEGVRRAYELGY   80 (202)
T ss_pred             EEEeeCCHHHHHHHHHHHHhccCCCceEEEEECCCCcchHHHHHHhcCCC-ceEEEECccccchhhHHHHHHHHHhccCC
Confidence            4568899999999999865542  24899999999999999999986542 144444444444445566666544 3478


Q ss_pred             cEEEEecCCceeecC
Q 008286          372 KWMLYIDVDEFVYSP  386 (571)
Q Consensus       372 dWVlfiDaDEfL~p~  386 (571)
                      +|++++|.|..+.+.
T Consensus        81 d~v~~ld~D~~~~~~   95 (202)
T cd04185          81 DWIWLMDDDAIPDPD   95 (202)
T ss_pred             CEEEEeCCCCCcChH
Confidence            999999999998763

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=98.11  E-value=5.4e-05  Score=73.70  Aligned_cols=112  Identities=13%  Similarity=0.142  Sum_probs=74.6

Q ss_pred             eEEEEEEecchH-HHHHHHHHHhhhcCcc----EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCC-chhHHHHHHHHH
Q 008286          291 EICVCTMVYNVA-KFVKEWVIYHTKIGVE----KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIW-PKTQEAGFSHNA  364 (571)
Q Consensus       291 ~IcVctivkNEa-~~L~EwIeyH~~lGvd----~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~-~~~Q~aa~ndcl  364 (571)
                      .++|++.++||+ ..|.++|+.-..+-..    +++|.||+|+|++.++++.+...- .+.++.-+. .+....++|.++
T Consensus         2 ~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~   80 (234)
T cd06421           2 TVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY-GYRYLTRPDNRHAKAGNLNNAL   80 (234)
T ss_pred             ceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc-CceEEEeCCCCCCcHHHHHHHH
Confidence            478888899975 6789999987665442    799999999999999999986531 122222121 222334467776


Q ss_pred             HHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEE
Q 008286          365 IHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVS  412 (571)
Q Consensus       365 ~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~  412 (571)
                      ..+  .++|++++|.|.++.+.       .-..+.+.+.+.++++.+.
T Consensus        81 ~~a--~~d~i~~lD~D~~~~~~-------~l~~l~~~~~~~~~~~~v~  119 (234)
T cd06421          81 AHT--TGDFVAILDADHVPTPD-------FLRRTLGYFLDDPKVALVQ  119 (234)
T ss_pred             HhC--CCCEEEEEccccCcCcc-------HHHHHHHHHhcCCCeEEEe
Confidence            543  78999999999999763       2233444444435555554

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=98.11  E-value=4.4e-05  Score=72.85  Aligned_cols=90  Identities=17%  Similarity=0.264  Sum_probs=65.2

Q ss_pred             EEEEecchH--HHHHHHHHHhhhcC--ccEEEEEEcCC-ChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhc
Q 008286          294 VCTMVYNVA--KFVKEWVIYHTKIG--VEKFILYDNGS-EDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAK  368 (571)
Q Consensus       294 VctivkNEa--~~L~EwIeyH~~lG--vd~f~IYDn~S-tD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~  368 (571)
                      |++.++|++  .+|.++|+.-..+-  -.+++|+|++| +|+|.++++.|.+..- +.++.-+...+-..+.|.++..+ 
T Consensus         2 viip~~n~~~~~~l~~~l~Sl~~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n~G~~~a~N~g~~~a-   79 (201)
T cd04195           2 VLMSVYIKEKPEFLREALESILKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKNRGLGKALNEGLKHC-   79 (201)
T ss_pred             EEEEccccchHHHHHHHHHHHHhcCCCCcEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCccccHHHHHHHHHHhc-
Confidence            455577775  58999999976653  35788888887 7899999999865422 44444344445556678777644 


Q ss_pred             CCCcEEEEecCCceeecC
Q 008286          369 HSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       369 ~~~dWVlfiDaDEfL~p~  386 (571)
                       ..+|++++|.|.++.+.
T Consensus        80 -~gd~i~~lD~Dd~~~~~   96 (201)
T cd04195          80 -TYDWVARMDTDDISLPD   96 (201)
T ss_pred             -CCCEEEEeCCccccCcH
Confidence             68999999999987763

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation

Probab=98.09  E-value=3.1e-05  Score=75.10  Aligned_cols=90  Identities=17%  Similarity=0.136  Sum_probs=64.9

Q ss_pred             EEEecchHHHHHHHHHHhhhc------CccEEEEEEcCCChhHHHHHHhhcCC-CcEEEEEecCCchhHHHHHHHHHHHh
Q 008286          295 CTMVYNVAKFVKEWVIYHTKI------GVEKFILYDNGSEDDLQNVVNELNGD-GYNVTTLLWIWPKTQEAGFSHNAIHA  367 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~l------Gvd~f~IYDn~StD~t~eIL~~y~~~-G~~Vt~i~Wp~~~~Q~aa~ndcl~r~  367 (571)
                      ++.++||++.|.++|+.-..+      ...+++|+|++|+|+|.++++.+.+. +..+..+.-....+...+++..+..+
T Consensus         2 iip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~~~a   81 (211)
T cd04188           2 VIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKNRGKGGAVRAGMLAA   81 (211)
T ss_pred             EEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHHHHh
Confidence            456899999999888875443      23589999999999999999998653 32234443333444556667666544


Q ss_pred             cCCCcEEEEecCCceeecC
Q 008286          368 KHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       368 ~~~~dWVlfiDaDEfL~p~  386 (571)
                        ..+||+++|+|..+.+.
T Consensus        82 --~gd~i~~ld~D~~~~~~   98 (211)
T cd04188          82 --RGDYILFADADLATPFE   98 (211)
T ss_pred             --cCCEEEEEeCCCCCCHH
Confidence              45999999999987763

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=98.09  E-value=5.4e-05  Score=68.26  Aligned_cols=89  Identities=16%  Similarity=0.152  Sum_probs=63.6

Q ss_pred             EEEecchHHHHHHHHHHhhhcC--ccEEEEEEcCCChhHHHHHHhhcCCCc-EEEEEecCCchhHHHHHHHHHHHhcCCC
Q 008286          295 CTMVYNVAKFVKEWVIYHTKIG--VEKFILYDNGSEDDLQNVVNELNGDGY-NVTTLLWIWPKTQEAGFSHNAIHAKHSC  371 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~lG--vd~f~IYDn~StD~t~eIL~~y~~~G~-~Vt~i~Wp~~~~Q~aa~ndcl~r~~~~~  371 (571)
                      ++.++|+++.|.++|+....+.  -.+++|.|++|+|++.++++.+...+. .+..+.-+...+...+.|..+..  ...
T Consensus         2 iip~~n~~~~l~~~l~sl~~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~--~~~   79 (180)
T cd06423           2 IVPAYNEEAVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENGGKAGALNAGLRH--AKG   79 (180)
T ss_pred             eecccChHHHHHHHHHHHHhCCCCceEEEEEeCCCccchHHHHHHHhccccceEEEEEecccCCchHHHHHHHHh--cCC
Confidence            4458899999999999877664  458999999999999999999876431 23333322233333444544433  388


Q ss_pred             cEEEEecCCceeec
Q 008286          372 KWMLYIDVDEFVYS  385 (571)
Q Consensus       372 dWVlfiDaDEfL~p  385 (571)
                      +|++++|.|..+.+
T Consensus        80 ~~i~~~D~D~~~~~   93 (180)
T cd06423          80 DIVVVLDADTILEP   93 (180)
T ss_pred             CEEEEECCCCCcCh
Confidence            99999999998865

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=98.07  E-value=2.2e-05  Score=76.11  Aligned_cols=89  Identities=16%  Similarity=0.100  Sum_probs=66.8

Q ss_pred             EEEecchHHHHHHHHHHhhhc---CccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcCCC
Q 008286          295 CTMVYNVAKFVKEWVIYHTKI---GVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSC  371 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~l---Gvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~~~  371 (571)
                      ++.++|++..|..+|+.-..+   ..-+++|+||+|+|++.++++.|.+..-.+..+......+...+.|.++..+.  .
T Consensus         2 iIp~yn~~~~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n~G~~~a~n~g~~~a~--g   79 (224)
T cd06442           2 IIPTYNERENIPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGKRGLGSAYIEGFKAAR--G   79 (224)
T ss_pred             eEeccchhhhHHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCCCChHHHHHHHHHHcC--C
Confidence            455899999998888775443   24589999999999999999998664333555555555556677787776554  5


Q ss_pred             cEEEEecCCceeec
Q 008286          372 KWMLYIDVDEFVYS  385 (571)
Q Consensus       372 dWVlfiDaDEfL~p  385 (571)
                      +||+++|.|..+.+
T Consensus        80 d~i~~lD~D~~~~~   93 (224)
T cd06442          80 DVIVVMDADLSHPP   93 (224)
T ss_pred             CEEEEEECCCCCCH
Confidence            99999999988765

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=98.06  E-value=4.1e-05  Score=83.92  Aligned_cols=96  Identities=17%  Similarity=0.123  Sum_probs=70.5

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHhhhcCc--c--EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHH
Q 008286          288 PKSEICVCTMVYNVAKFVKEWVIYHTKIGV--E--KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHN  363 (571)
Q Consensus       288 ~k~~IcVctivkNEa~~L~EwIeyH~~lGv--d--~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndc  363 (571)
                      ....++|++-++||++.|.++|+.-..+-.  +  +++|.||+|+|+|.++++.+.+..-.+.++.-+..++...+.|..
T Consensus        47 ~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~~~Gka~AlN~g  126 (439)
T TIGR03111        47 KLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNSDQGKAKALNAA  126 (439)
T ss_pred             CCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCCCCCHHHHHHHH
Confidence            345688888899999999999998655432  2  599999999999999998876543223332223334555667777


Q ss_pred             HHHhcCCCcEEEEecCCceeec
Q 008286          364 AIHAKHSCKWMLYIDVDEFVYS  385 (571)
Q Consensus       364 l~r~~~~~dWVlfiDaDEfL~p  385 (571)
                      +..  ...+||+++|+|..+.+
T Consensus       127 l~~--s~g~~v~~~DaD~~~~~  146 (439)
T TIGR03111       127 IYN--SIGKYIIHIDSDGKLHK  146 (439)
T ss_pred             HHH--ccCCEEEEECCCCCcCh
Confidence            654  35789999999999865

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=98.06  E-value=5.1e-05  Score=74.19  Aligned_cols=91  Identities=11%  Similarity=0.169  Sum_probs=68.8

Q ss_pred             EEEEEEecchH-HHHHHHHHHhhhcCccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcCC
Q 008286          292 ICVCTMVYNVA-KFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHS  370 (571)
Q Consensus       292 IcVctivkNEa-~~L~EwIeyH~~lGvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~~  370 (571)
                      |+|++.++||+ ..|.++|+.-..+...+|+|.|++|+|++.+++........ +.++. ....+...+.|.++..+  .
T Consensus         2 isVvIp~~ne~~~~l~~~l~sl~~q~~~eiivvdd~s~d~~~~~l~~~~~~~~-~~v~~-~~~~g~~~a~n~g~~~a--~   77 (235)
T cd06434           2 VTVIIPVYDEDPDVFRECLRSILRQKPLEIIVVTDGDDEPYLSILSQTVKYGG-IFVIT-VPHPGKRRALAEGIRHV--T   77 (235)
T ss_pred             eEEEEeecCCChHHHHHHHHHHHhCCCCEEEEEeCCCChHHHHHHHhhccCCc-EEEEe-cCCCChHHHHHHHHHHh--C
Confidence            67788899999 99999999876666679999999999999998755443322 33332 23344556677776544  7


Q ss_pred             CcEEEEecCCceeecC
Q 008286          371 CKWMLYIDVDEFVYSP  386 (571)
Q Consensus       371 ~dWVlfiDaDEfL~p~  386 (571)
                      .+||+++|+|..+.+.
T Consensus        78 ~d~v~~lD~D~~~~~~   93 (235)
T cd06434          78 TDIVVLLDSDTVWPPN   93 (235)
T ss_pred             CCEEEEECCCceeChh
Confidence            8999999999999974

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=98.03  E-value=4.7e-05  Score=76.04  Aligned_cols=96  Identities=20%  Similarity=0.155  Sum_probs=67.8

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHhhh----cCccEEEEEEcCCChhHHHHHHhhcCC-C-cEEEEEecCCchhHHHHHH
Q 008286          288 PKSEICVCTMVYNVAKFVKEWVIYHTK----IGVEKFILYDNGSEDDLQNVVNELNGD-G-YNVTTLLWIWPKTQEAGFS  361 (571)
Q Consensus       288 ~k~~IcVctivkNEa~~L~EwIeyH~~----lGvd~f~IYDn~StD~t~eIL~~y~~~-G-~~Vt~i~Wp~~~~Q~aa~n  361 (571)
                      ....++|++.++||++.|.+.++.-..    .+--+|+|+|++|+|+|.++++.+.+. + ..+..+.-+...+...++|
T Consensus         7 ~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a~n   86 (243)
T PLN02726          7 GAMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLGTAYI   86 (243)
T ss_pred             CCceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCCHHHHHH
Confidence            345789998899999988776654322    112289999999999999999987542 1 1245444444444456677


Q ss_pred             HHHHHhcCCCcEEEEecCCceeec
Q 008286          362 HNAIHAKHSCKWMLYIDVDEFVYS  385 (571)
Q Consensus       362 dcl~r~~~~~dWVlfiDaDEfL~p  385 (571)
                      .++..  ...+|++++|+|-.+.+
T Consensus        87 ~g~~~--a~g~~i~~lD~D~~~~~  108 (243)
T PLN02726         87 HGLKH--ASGDFVVIMDADLSHHP  108 (243)
T ss_pred             HHHHH--cCCCEEEEEcCCCCCCH
Confidence            76654  36799999999988655

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.02  E-value=9e-05  Score=67.51  Aligned_cols=87  Identities=20%  Similarity=0.128  Sum_probs=65.9

Q ss_pred             EEEecchHHHHHHHHHHhhhc--CccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcCCCc
Q 008286          295 CTMVYNVAKFVKEWVIYHTKI--GVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCK  372 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~l--Gvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~~~d  372 (571)
                      ++.++|+...|.+.|+.-..+  ...+++|+|++|+|++.++++.+..   +++++.-+...+...+.|.++..+  .++
T Consensus         2 ii~~~~~~~~l~~~l~sl~~~~~~~~~iiivdd~s~~~~~~~~~~~~~---~~~~~~~~~~~g~~~a~n~~~~~~--~~~   76 (166)
T cd04186           2 IIVNYNSLEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFP---EVRLIRNGENLGFGAGNNQGIREA--KGD   76 (166)
T ss_pred             EEEecCCHHHHHHHHHHHHhccCCCeEEEEEECCCCchHHHHHHHhCC---CeEEEecCCCcChHHHhhHHHhhC--CCC
Confidence            456789999999888886554  3568999999999999999987754   255544444445556677777655  799


Q ss_pred             EEEEecCCceeecC
Q 008286          373 WMLYIDVDEFVYSP  386 (571)
Q Consensus       373 WVlfiDaDEfL~p~  386 (571)
                      |++++|.|..+.+.
T Consensus        77 ~i~~~D~D~~~~~~   90 (166)
T cd04186          77 YVLLLNPDTVVEPG   90 (166)
T ss_pred             EEEEECCCcEECcc
Confidence            99999999988653

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=98.01  E-value=4.9e-05  Score=81.80  Aligned_cols=98  Identities=15%  Similarity=0.045  Sum_probs=69.6

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHhhhcCc---cEEEEEEcCCChhHHHHHHhhcCCCc---EEEEEec---C-CchhHH
Q 008286          288 PKSEICVCTMVYNVAKFVKEWVIYHTKIGV---EKFILYDNGSEDDLQNVVNELNGDGY---NVTTLLW---I-WPKTQE  357 (571)
Q Consensus       288 ~k~~IcVctivkNEa~~L~EwIeyH~~lGv---d~f~IYDn~StD~t~eIL~~y~~~G~---~Vt~i~W---p-~~~~Q~  357 (571)
                      ....++|++.++||++.|.++|+.-..+-.   -+|+|+||+|+|+|.++++.+.+..-   .+.++.-   + +..+..
T Consensus        38 ~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~  117 (384)
T TIGR03469        38 AWPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGKL  117 (384)
T ss_pred             CCCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcchH
Confidence            445699999999999999999998655532   38999999999999999998864210   2444431   1 223444


Q ss_pred             HHHHHHHHHhcC---CCcEEEEecCCceeec
Q 008286          358 AGFSHNAIHAKH---SCKWMLYIDVDEFVYS  385 (571)
Q Consensus       358 aa~ndcl~r~~~---~~dWVlfiDaDEfL~p  385 (571)
                      .+.|..+..++.   ..||++++|+|-.+.|
T Consensus       118 ~A~n~g~~~A~~~~~~gd~llflDaD~~~~p  148 (384)
T TIGR03469       118 WAVSQGIAAARTLAPPADYLLLTDADIAHGP  148 (384)
T ss_pred             HHHHHHHHHHhccCCCCCEEEEECCCCCCCh
Confidence            455655554432   2899999999998765

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=98.00  E-value=8.4e-05  Score=70.83  Aligned_cols=93  Identities=15%  Similarity=0.172  Sum_probs=64.5

Q ss_pred             eEEEEEEecchH-HHHHHHHHHhhhcCc--cEEEEEEcCCChh-HHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHH
Q 008286          291 EICVCTMVYNVA-KFVKEWVIYHTKIGV--EKFILYDNGSEDD-LQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIH  366 (571)
Q Consensus       291 ~IcVctivkNEa-~~L~EwIeyH~~lGv--d~f~IYDn~StD~-t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r  366 (571)
                      .++|++.++|+. +.|.++|+.-..+-.  -+++|+|++|+|+ +.++++.+......++.+.-+...+-..++|..+..
T Consensus         2 ~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~   81 (202)
T cd04184           2 LISIVMPVYNTPEKYLREAIESVRAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENGGISAATNSALEL   81 (202)
T ss_pred             eEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccCCCHHHHHHHHHHh
Confidence            478888899999 999999988654422  3899999999986 556777765432224443323333333456666654


Q ss_pred             hcCCCcEEEEecCCceeec
Q 008286          367 AKHSCKWMLYIDVDEFVYS  385 (571)
Q Consensus       367 ~~~~~dWVlfiDaDEfL~p  385 (571)
                      +  .++|++++|.|..+.+
T Consensus        82 a--~~d~i~~ld~D~~~~~   98 (202)
T cd04184          82 A--TGEFVALLDHDDELAP   98 (202)
T ss_pred             h--cCCEEEEECCCCcCCh
Confidence            3  5799999999998875

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

Probab=97.98  E-value=8.3e-05  Score=73.19  Aligned_cols=114  Identities=13%  Similarity=0.112  Sum_probs=72.0

Q ss_pred             eEEEEEEecchHHHHHHHHHHhhhcCc----cEEEEEEcCCChhHHHHHHhhcC----CCcEEEEEecCC-chhHHHHHH
Q 008286          291 EICVCTMVYNVAKFVKEWVIYHTKIGV----EKFILYDNGSEDDLQNVVNELNG----DGYNVTTLLWIW-PKTQEAGFS  361 (571)
Q Consensus       291 ~IcVctivkNEa~~L~EwIeyH~~lGv----d~f~IYDn~StD~t~eIL~~y~~----~G~~Vt~i~Wp~-~~~Q~aa~n  361 (571)
                      .++|++.++||+++|.++|+.-..+-.    -+|+|.|+ |+|+|.++++++.+    .+..+..+.... .+....+.|
T Consensus         2 ~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~n   80 (232)
T cd06437           2 MVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADRTGYKAGALA   80 (232)
T ss_pred             ceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCCCCCchHHHH
Confidence            478888899999999999998655422    25778886 99999999887642    233344333222 222223445


Q ss_pred             HHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEe
Q 008286          362 HNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRC  415 (571)
Q Consensus       362 dcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w  415 (571)
                      ..+.  ....+||+++|+|-.+.+.       .-..+..++. .++++.+.-.+
T Consensus        81 ~g~~--~a~~~~i~~~DaD~~~~~~-------~l~~~~~~~~-~~~v~~v~~~~  124 (232)
T cd06437          81 EGMK--VAKGEYVAIFDADFVPPPD-------FLQKTPPYFA-DPKLGFVQTRW  124 (232)
T ss_pred             HHHH--hCCCCEEEEEcCCCCCChH-------HHHHhhhhhc-CCCeEEEecce
Confidence            4443  3378999999999998763       2222433332 35666655433

Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=97.98  E-value=6.6e-05  Score=73.54  Aligned_cols=91  Identities=16%  Similarity=0.204  Sum_probs=69.0

Q ss_pred             EEEEEEecchHHHHHHHHHHhhhcCc----cEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHh
Q 008286          292 ICVCTMVYNVAKFVKEWVIYHTKIGV----EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHA  367 (571)
Q Consensus       292 IcVctivkNEa~~L~EwIeyH~~lGv----d~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~  367 (571)
                      ++|++.++|+++.|.+.|+....+..    -+++|.||+|+|++.++++.+.+....|.++.-+. .+...+.|.++..+
T Consensus         2 ~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~-~~~~~a~N~g~~~a   80 (249)
T cd02525           2 VSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPK-RIQSAGLNIGIRNS   80 (249)
T ss_pred             EEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCC-CCchHHHHHHHHHh
Confidence            67788889999999999998766644    38999999999999999999976533355543332 23345677776654


Q ss_pred             cCCCcEEEEecCCceeec
Q 008286          368 KHSCKWMLYIDVDEFVYS  385 (571)
Q Consensus       368 ~~~~dWVlfiDaDEfL~p  385 (571)
                        ..+|++++|.|..+.+
T Consensus        81 --~~d~v~~lD~D~~~~~   96 (249)
T cd02525          81 --RGDIIIRVDAHAVYPK   96 (249)
T ss_pred             --CCCEEEEECCCccCCH
Confidence              7899999999998765

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis

Probab=97.94  E-value=0.00014  Score=69.16  Aligned_cols=89  Identities=11%  Similarity=0.018  Sum_probs=63.1

Q ss_pred             EEEecchHHHHHHHHHHhhhcCc----cEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHh---
Q 008286          295 CTMVYNVAKFVKEWVIYHTKIGV----EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHA---  367 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~lGv----d~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~---  367 (571)
                      ++.++||+..|.++|+.-..+..    -+|+|+|++|+|+|.++++.+...   +....-+...++..+.|..+..+   
T Consensus         2 vIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~~~~~---~~~~~~~~~~gk~~aln~g~~~a~~~   78 (183)
T cd06438           2 LIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARAAGAT---VLERHDPERRGKGYALDFGFRHLLNL   78 (183)
T ss_pred             EEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHHcCCe---EEEeCCCCCCCHHHHHHHHHHHHHhc
Confidence            45589999999999998655433    368999999999999999887542   33222122334445566554444   


Q ss_pred             cCCCcEEEEecCCceeecC
Q 008286          368 KHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       368 ~~~~dWVlfiDaDEfL~p~  386 (571)
                      ....+|++++|+|-.+.|.
T Consensus        79 ~~~~d~v~~~DaD~~~~p~   97 (183)
T cd06438          79 ADDPDAVVVFDADNLVDPN   97 (183)
T ss_pred             CCCCCEEEEEcCCCCCChh
Confidence            2468999999999999864

The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional

Probab=97.92  E-value=9.6e-05  Score=78.31  Aligned_cols=98  Identities=14%  Similarity=0.206  Sum_probs=72.0

Q ss_pred             CCCceEEEEEEecchHHHHHHHHHHhhh----------cCccEEEEEEcCCChhHHHHHHhhcCCC----cEEEEEecCC
Q 008286          287 EPKSEICVCTMVYNVAKFVKEWVIYHTK----------IGVEKFILYDNGSEDDLQNVVNELNGDG----YNVTTLLWIW  352 (571)
Q Consensus       287 ~~k~~IcVctivkNEa~~L~EwIeyH~~----------lGvd~f~IYDn~StD~t~eIL~~y~~~G----~~Vt~i~Wp~  352 (571)
                      .....++|++.++||++.|.+.|+--..          .+--+++|+|+||+|+|.++++.+.+..    ..+.++.-+.
T Consensus        67 ~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~  146 (333)
T PTZ00260         67 DSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLR  146 (333)
T ss_pred             CCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCC
Confidence            4566889999999999999887775322          1235899999999999999999986531    1245555455


Q ss_pred             chhHHHHHHHHHHHhcCCCcEEEEecCCceeecC
Q 008286          353 PKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       353 ~~~Q~aa~ndcl~r~~~~~dWVlfiDaDEfL~p~  386 (571)
                      +.++..+++..+..+  ..+||+++|+|-...+.
T Consensus       147 N~G~~~A~~~Gi~~a--~gd~I~~~DaD~~~~~~  178 (333)
T PTZ00260        147 NKGKGGAVRIGMLAS--RGKYILMVDADGATDID  178 (333)
T ss_pred             CCChHHHHHHHHHHc--cCCEEEEEeCCCCCCHH
Confidence            556666666665543  57999999999988774

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine

Probab=97.91  E-value=0.00017  Score=69.51  Aligned_cols=112  Identities=12%  Similarity=0.048  Sum_probs=71.1

Q ss_pred             EEEecchHHHHHHHHHHhhhcC-ccEEEEEEcCCChhHHHHHHhhcCCCcEEEEE--ecCC-chhHHHHHHHHHHHhcC-
Q 008286          295 CTMVYNVAKFVKEWVIYHTKIG-VEKFILYDNGSEDDLQNVVNELNGDGYNVTTL--LWIW-PKTQEAGFSHNAIHAKH-  369 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~lG-vd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i--~Wp~-~~~Q~aa~ndcl~r~~~-  369 (571)
                      ++.++||++.|.++|+.-..+. -.+|+|+|++|+|+|.++++ +......+.++  .++. ..+...+.|..+..+.. 
T Consensus         2 iIp~~Ne~~~l~~~l~sl~~~~~~~eIivvdd~S~D~t~~~~~-~~~~~~~v~~i~~~~~~~~~Gk~~aln~g~~~~~~~   80 (191)
T cd06436           2 LVPCLNEEAVIQRTLASLLRNKPNFLVLVIDDASDDDTAGIVR-LAITDSRVHLLRRHLPNARTGKGDALNAAYDQIRQI   80 (191)
T ss_pred             EEeccccHHHHHHHHHHHHhCCCCeEEEEEECCCCcCHHHHHh-heecCCcEEEEeccCCcCCCCHHHHHHHHHHHHhhh
Confidence            4558999999999998855543 23799999999999999998 32221123333  2222 22334556666654432 


Q ss_pred             --------CCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEe
Q 008286          370 --------SCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRC  415 (571)
Q Consensus       370 --------~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w  415 (571)
                              ..+||+++|+|-.+.+.       .-..+..++. .|.++.+...+
T Consensus        81 ~~~~g~~~~~d~v~~~DaD~~~~~~-------~l~~~~~~~~-~~~v~~v~~~~  126 (191)
T cd06436          81 LIEEGADPERVIIAVIDADGRLDPN-------ALEAVAPYFS-DPRVAGTQSRV  126 (191)
T ss_pred             ccccccCCCccEEEEECCCCCcCHh-------HHHHHHHhhc-CCceEEEeeeE
Confidence                    35899999999998874       1222444443 35666665444

N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional

Probab=97.89  E-value=0.0001  Score=77.74  Aligned_cols=96  Identities=19%  Similarity=0.225  Sum_probs=68.0

Q ss_pred             CceEEEEEEecchHHHHHHHHHHhhh----cCc-cEEEEEEcCCChhHHHHHHhhcCC-CcEEEEEecCCchhHHHHHHH
Q 008286          289 KSEICVCTMVYNVAKFVKEWVIYHTK----IGV-EKFILYDNGSEDDLQNVVNELNGD-GYNVTTLLWIWPKTQEAGFSH  362 (571)
Q Consensus       289 k~~IcVctivkNEa~~L~EwIeyH~~----lGv-d~f~IYDn~StD~t~eIL~~y~~~-G~~Vt~i~Wp~~~~Q~aa~nd  362 (571)
                      ...++|++-++||++.|.+.++.-..    .+. -+|+|+|++|+|+|.++++.+.+. +..+..+......++..+++.
T Consensus         5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n~G~~~A~~~   84 (325)
T PRK10714          5 IKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRNYGQHSAIMA   84 (325)
T ss_pred             CCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCCCCHHHHHHH
Confidence            34589998899999998888765321    222 389999999999999999988643 333443333444455556665


Q ss_pred             HHHHhcCCCcEEEEecCCceeecC
Q 008286          363 NAIHAKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       363 cl~r~~~~~dWVlfiDaDEfL~p~  386 (571)
                      .+..  ...||++++|+|....|.
T Consensus        85 G~~~--A~gd~vv~~DaD~q~~p~  106 (325)
T PRK10714         85 GFSH--VTGDLIITLDADLQNPPE  106 (325)
T ss_pred             HHHh--CCCCEEEEECCCCCCCHH
Confidence            5433  367999999999997763

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=97.88  E-value=0.00015  Score=79.47  Aligned_cols=114  Identities=14%  Similarity=0.172  Sum_probs=78.8

Q ss_pred             CceEEEEEEecchHHHHHHHHHHhhhcCc--cEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHH
Q 008286          289 KSEICVCTMVYNVAKFVKEWVIYHTKIGV--EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIH  366 (571)
Q Consensus       289 k~~IcVctivkNEa~~L~EwIeyH~~lGv--d~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r  366 (571)
                      ...++|..-++||+..|.++|+.-..+..  -+|+|.|++|+|+|.++++++.++.-.+.++.-....+...+.|..+..
T Consensus        74 ~p~vsViIP~yNE~~~i~~~l~sll~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n~Gka~AlN~gl~~  153 (444)
T PRK14583         74 HPLVSILVPCFNEGLNARETIHAALAQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHNQGKAIALRMGAAA  153 (444)
T ss_pred             CCcEEEEEEeCCCHHHHHHHHHHHHcCCCCCeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCCCCHHHHHHHHHHh
Confidence            34688888899999999999998544422  3799999999999999999886542224444323333444566666543


Q ss_pred             hcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhh---ccCCccEEEEE
Q 008286          367 AKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIP---QLHSIGQVSIR  414 (571)
Q Consensus       367 ~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~---~~p~i~~i~~~  414 (571)
                        .+.||++++|+|..+.+.          .|..+++   +.++++++.-+
T Consensus       154 --a~~d~iv~lDAD~~~~~d----------~L~~lv~~~~~~~~~g~v~g~  192 (444)
T PRK14583        154 --ARSEYLVCIDGDALLDKN----------AVPYLVAPLIANPRTGAVTGN  192 (444)
T ss_pred             --CCCCEEEEECCCCCcCHH----------HHHHHHHHHHhCCCeEEEEcc
Confidence              478999999999988763          3433333   34667766543

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=97.87  E-value=0.00014  Score=70.34  Aligned_cols=89  Identities=15%  Similarity=0.141  Sum_probs=63.0

Q ss_pred             EEEecchHHHHHHHHHHhhhcC--c--cEEEEEEcCCChhHHHHHH-hhcCCCcEEEEEecC--CchhHHHHHHHHHHHh
Q 008286          295 CTMVYNVAKFVKEWVIYHTKIG--V--EKFILYDNGSEDDLQNVVN-ELNGDGYNVTTLLWI--WPKTQEAGFSHNAIHA  367 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~lG--v--d~f~IYDn~StD~t~eIL~-~y~~~G~~Vt~i~Wp--~~~~Q~aa~ndcl~r~  367 (571)
                      ++.++|+...|.++|+.-..+-  .  -+|+|.|++|+|++.++++ .....+..+.++.-+  ...+...++|.++.. 
T Consensus         2 iip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g~~~-   80 (229)
T cd04192           2 VIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSRVSISGKKNALTTAIKA-   80 (229)
T ss_pred             EEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccCcccchhHHHHHHHHHH-
Confidence            4568999999999998854442  2  4799999999999999988 222223335554433  234455667777654 


Q ss_pred             cCCCcEEEEecCCceeec
Q 008286          368 KHSCKWMLYIDVDEFVYS  385 (571)
Q Consensus       368 ~~~~dWVlfiDaDEfL~p  385 (571)
                       ...+||+++|+|..+.+
T Consensus        81 -~~~d~i~~~D~D~~~~~   97 (229)
T cd04192          81 -AKGDWIVTTDADCVVPS   97 (229)
T ss_pred             -hcCCEEEEECCCcccCH
Confidence             36799999999998865

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=97.84  E-value=0.00017  Score=74.39  Aligned_cols=91  Identities=16%  Similarity=-0.007  Sum_probs=65.3

Q ss_pred             EEEEEecchH-HHHHHHHHHhhhcC---c-cEEEEEEcCCChhHHHHHHhhc--CCCcEEEEEecCCchhHHHHHHHHHH
Q 008286          293 CVCTMVYNVA-KFVKEWVIYHTKIG---V-EKFILYDNGSEDDLQNVVNELN--GDGYNVTTLLWIWPKTQEAGFSHNAI  365 (571)
Q Consensus       293 cVctivkNEa-~~L~EwIeyH~~lG---v-d~f~IYDn~StD~t~eIL~~y~--~~G~~Vt~i~Wp~~~~Q~aa~ndcl~  365 (571)
                      +|++.++|+. +.|.++|+.-..+-   . .+|+|+||+|+|++.+++..+.  +....|.++.-+...+-..+.|..+.
T Consensus         1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~   80 (299)
T cd02510           1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGAR   80 (299)
T ss_pred             CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHH
Confidence            4677799999 99999999854432   1 3899999999999999886521  11113666655555555566677765


Q ss_pred             HhcCCCcEEEEecCCceeec
Q 008286          366 HAKHSCKWMLYIDVDEFVYS  385 (571)
Q Consensus       366 r~~~~~dWVlfiDaDEfL~p  385 (571)
                      .+  ..+||+|+|.|-.+.+
T Consensus        81 ~A--~gd~i~fLD~D~~~~~   98 (299)
T cd02510          81 AA--TGDVLVFLDSHCEVNV   98 (299)
T ss_pred             Hc--cCCEEEEEeCCcccCc
Confidence            44  6799999999999854

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=97.82  E-value=0.00014  Score=71.21  Aligned_cols=86  Identities=17%  Similarity=0.191  Sum_probs=63.3

Q ss_pred             EEecchH-HHHHHHHHHhhhcCccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcC-CCcE
Q 008286          296 TMVYNVA-KFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKH-SCKW  373 (571)
Q Consensus       296 tivkNEa-~~L~EwIeyH~~lGvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~-~~dW  373 (571)
                      +..+|++ ..|.++|+.-..+ ..+|+|+||+|+|.+..+++. ...+  +..+.-+...+-..++|.++..+.. +++|
T Consensus         3 I~~yn~~~~~l~~~l~sl~~q-~~~iivvDn~s~~~~~~~~~~-~~~~--i~~i~~~~n~G~~~a~N~g~~~a~~~~~d~   78 (237)
T cd02526           3 VVTYNPDLSKLKELLAALAEQ-VDKVVVVDNSSGNDIELRLRL-NSEK--IELIHLGENLGIAKALNIGIKAALENGADY   78 (237)
T ss_pred             EEEecCCHHHHHHHHHHHhcc-CCEEEEEeCCCCccHHHHhhc-cCCc--EEEEECCCceehHHhhhHHHHHHHhCCCCE
Confidence            3478888 9999999997666 678999999998887766654 2332  4455444444445667777776554 7899


Q ss_pred             EEEecCCceeec
Q 008286          374 MLYIDVDEFVYS  385 (571)
Q Consensus       374 VlfiDaDEfL~p  385 (571)
                      ++++|.|..+.+
T Consensus        79 v~~lD~D~~~~~   90 (237)
T cd02526          79 VLLFDQDSVPPP   90 (237)
T ss_pred             EEEECCCCCcCH
Confidence            999999999875

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine

Probab=97.79  E-value=0.00014  Score=70.93  Aligned_cols=90  Identities=13%  Similarity=0.172  Sum_probs=63.2

Q ss_pred             EEEecchHHHHHHHHHHhhhcCc---cEEEEEEcCCChhHHHHHHhhcCC----CcEEEEEe--cCCchhHHHHHHHHHH
Q 008286          295 CTMVYNVAKFVKEWVIYHTKIGV---EKFILYDNGSEDDLQNVVNELNGD----GYNVTTLL--WIWPKTQEAGFSHNAI  365 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~lGv---d~f~IYDn~StD~t~eIL~~y~~~----G~~Vt~i~--Wp~~~~Q~aa~ndcl~  365 (571)
                      ++.++|++++|.++|+.-..+-.   -+++|+|++|+|+|.++++.|.++    ++.+....  .+...+-..+.|.++.
T Consensus         2 iIp~yn~~~~l~~~l~sl~~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N~g~~   81 (219)
T cd06913           2 ILPVHNGEQWLDECLESVLQQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQAIA   81 (219)
T ss_pred             EEeecCcHHHHHHHHHHHHhCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHHHHHH
Confidence            45689999999999998655422   389999999999999999987542    22222211  1222334455666654


Q ss_pred             HhcCCCcEEEEecCCceeecC
Q 008286          366 HAKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       366 r~~~~~dWVlfiDaDEfL~p~  386 (571)
                      .  ...+|++|+|+|..+.+.
T Consensus        82 ~--a~gd~i~~lD~D~~~~~~  100 (219)
T cd06913          82 Q--SSGRYLCFLDSDDVMMPQ  100 (219)
T ss_pred             h--cCCCEEEEECCCccCChh
Confidence            3  367999999999998874

This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.

>PRK10018 putative glycosyl transferase; Provisional

Probab=97.79  E-value=0.00044  Score=71.66  Aligned_cols=94  Identities=16%  Similarity=0.103  Sum_probs=68.6

Q ss_pred             CceEEEEEEecchHHHHHHHHHHhhhcCcc--EEEEEEcCCCh--hHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHH
Q 008286          289 KSEICVCTMVYNVAKFVKEWVIYHTKIGVE--KFILYDNGSED--DLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNA  364 (571)
Q Consensus       289 k~~IcVctivkNEa~~L~EwIeyH~~lGvd--~f~IYDn~StD--~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl  364 (571)
                      +..++|++.++|++++|.+.|+.-..+-..  +++|.|++|+|  .+.++++.+.+.  .|.++.-+...+..++.|.++
T Consensus         4 ~p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiIVVDDgS~~~~~~~~~~~~~~~~--ri~~i~~~~n~G~~~a~N~gi   81 (279)
T PRK10018          4 NPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDP--RITYIHNDINSGACAVRNQAI   81 (279)
T ss_pred             CCEEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCHHHHHHHHHHcCCC--CEEEEECCCCCCHHHHHHHHH
Confidence            356899999999999999999886555443  89999999994  334444443332  366555555566667777776


Q ss_pred             HHhcCCCcEEEEecCCceeecC
Q 008286          365 IHAKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       365 ~r~~~~~dWVlfiDaDEfL~p~  386 (571)
                      ..  ...+||+|+|+|..+.|.
T Consensus        82 ~~--a~g~~I~~lDaDD~~~p~  101 (279)
T PRK10018         82 ML--AQGEYITGIDDDDEWTPN  101 (279)
T ss_pred             HH--cCCCEEEEECCCCCCCcc
Confidence            54  478999999999999874

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=97.79  E-value=0.0002  Score=70.25  Aligned_cols=93  Identities=16%  Similarity=0.159  Sum_probs=62.7

Q ss_pred             EEEEEecchH-HHHHHHHHHhhhcCc--cEEEEEEcCCChhHH-HHHHhhcCC-CcEEEEEecC-CchhHHHHHHHHHHH
Q 008286          293 CVCTMVYNVA-KFVKEWVIYHTKIGV--EKFILYDNGSEDDLQ-NVVNELNGD-GYNVTTLLWI-WPKTQEAGFSHNAIH  366 (571)
Q Consensus       293 cVctivkNEa-~~L~EwIeyH~~lGv--d~f~IYDn~StD~t~-eIL~~y~~~-G~~Vt~i~Wp-~~~~Q~aa~ndcl~r  366 (571)
                      +|++-++||+ ..|.++|+.-..+..  -+++|+||+|+|++. ++++.+.+. +..+..+.-. ..+.+..+.|.++..
T Consensus         1 siiip~~ne~~~~l~~~l~sl~~q~~~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~G~~~~a~n~g~~~   80 (236)
T cd06435           1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYALER   80 (236)
T ss_pred             CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCchHHHHHHHHh
Confidence            3566689997 789999988666643  489999999999975 444444321 2123333222 223345567877776


Q ss_pred             hcCCCcEEEEecCCceeec
Q 008286          367 AKHSCKWMLYIDVDEFVYS  385 (571)
Q Consensus       367 ~~~~~dWVlfiDaDEfL~p  385 (571)
                      +...+||++++|+|-.+.+
T Consensus        81 a~~~~d~i~~lD~D~~~~~   99 (236)
T cd06435          81 TAPDAEIIAVIDADYQVEP   99 (236)
T ss_pred             cCCCCCEEEEEcCCCCcCH
Confidence            6556899999999987665

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=97.71  E-value=0.00018  Score=67.89  Aligned_cols=89  Identities=20%  Similarity=0.140  Sum_probs=59.9

Q ss_pred             EEEecchHHHHHHHHHHhhhc-----CccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcC
Q 008286          295 CTMVYNVAKFVKEWVIYHTKI-----GVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKH  369 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~l-----Gvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~  369 (571)
                      ++.++|++..|.+.|+....+     .--+++|.|++|+|++.++++.+.+...++..+.-....+...++|..+..+  
T Consensus         2 iIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n~G~~~a~n~g~~~a--   79 (181)
T cd04187           2 VVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNFGQQAALLAGLDHA--   79 (181)
T ss_pred             EEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCCCCcHHHHHHHHHhc--
Confidence            456889998887776653221     2248999999999999999999876543344443222223334455544433  


Q ss_pred             CCcEEEEecCCceeec
Q 008286          370 SCKWMLYIDVDEFVYS  385 (571)
Q Consensus       370 ~~dWVlfiDaDEfL~p  385 (571)
                      ..+|++++|.|..+.+
T Consensus        80 ~~d~i~~~D~D~~~~~   95 (181)
T cd04187          80 RGDAVITMDADLQDPP   95 (181)
T ss_pred             CCCEEEEEeCCCCCCH
Confidence            5699999999999765

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional

Probab=97.71  E-value=0.00026  Score=74.26  Aligned_cols=96  Identities=14%  Similarity=0.089  Sum_probs=64.9

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHhhhc----CccEEEEEEcCCChhHHHHHHhhcCCCcE-EEEEe-cCCchhHHHHHH
Q 008286          288 PKSEICVCTMVYNVAKFVKEWVIYHTKI----GVEKFILYDNGSEDDLQNVVNELNGDGYN-VTTLL-WIWPKTQEAGFS  361 (571)
Q Consensus       288 ~k~~IcVctivkNEa~~L~EwIeyH~~l----Gvd~f~IYDn~StD~t~eIL~~y~~~G~~-Vt~i~-Wp~~~~Q~aa~n  361 (571)
                      ....++|++-++||++.|.+.|+.-..+    ...+|+|.|++|+|+|.++++.+...-+. ...+. -+...+-..+.+
T Consensus        29 ~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~Gkg~A~~  108 (306)
T PRK13915         29 AGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVSREEILPELPPRPGKGEALW  108 (306)
T ss_pred             CCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhcchhhhhccccCCCHHHHHH
Confidence            4467899988999999999988875432    34699999999999999999988543110 00000 011222234445


Q ss_pred             HHHHHhcCCCcEEEEecCCce-eec
Q 008286          362 HNAIHAKHSCKWMLYIDVDEF-VYS  385 (571)
Q Consensus       362 dcl~r~~~~~dWVlfiDaDEf-L~p  385 (571)
                      ..+.  ....+||+++|+|-. +.+
T Consensus       109 ~g~~--~a~gd~vv~lDaD~~~~~p  131 (306)
T PRK13915        109 RSLA--ATTGDIVVFVDADLINFDP  131 (306)
T ss_pred             HHHH--hcCCCEEEEEeCccccCCH
Confidence            4443  346799999999997 444

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=97.67  E-value=0.00043  Score=66.60  Aligned_cols=93  Identities=11%  Similarity=0.013  Sum_probs=62.2

Q ss_pred             eEEEEEEecchHHHHHHHHHHhhhcC--ccEEEEEEcCCChhHHHHHHhhcCC-C-cEEEEEecCCc---hhHHHHHHHH
Q 008286          291 EICVCTMVYNVAKFVKEWVIYHTKIG--VEKFILYDNGSEDDLQNVVNELNGD-G-YNVTTLLWIWP---KTQEAGFSHN  363 (571)
Q Consensus       291 ~IcVctivkNEa~~L~EwIeyH~~lG--vd~f~IYDn~StD~t~eIL~~y~~~-G-~~Vt~i~Wp~~---~~Q~aa~ndc  363 (571)
                      .++|++-++||+..|.++|+.-..+-  --+++|+|++|+|+|.++++.+.+. . ..+.++.-...   .....++|..
T Consensus         2 ~vsviip~~n~~~~l~~~L~sl~~q~~~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~n~g   81 (196)
T cd02520           2 GVSILKPLCGVDPNLYENLESFFQQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNLIKG   81 (196)
T ss_pred             CeEEEEecCCCCccHHHHHHHHHhccCCCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHHHHHH
Confidence            37888889999999999998865432  1389999999999999999888543 1 12333221211   1222233333


Q ss_pred             HHHhcCCCcEEEEecCCceeec
Q 008286          364 AIHAKHSCKWMLYIDVDEFVYS  385 (571)
Q Consensus       364 l~r~~~~~dWVlfiDaDEfL~p  385 (571)
                      +.  ....+|++++|+|..+.+
T Consensus        82 ~~--~a~~d~i~~~D~D~~~~~  101 (196)
T cd02520          82 YE--EARYDILVISDSDISVPP  101 (196)
T ss_pred             HH--hCCCCEEEEECCCceECh
Confidence            32  346899999999987754

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=97.64  E-value=0.00091  Score=62.60  Aligned_cols=89  Identities=11%  Similarity=0.079  Sum_probs=59.9

Q ss_pred             EEEecchHHHHHHHHHHhhhc--CccEEEEEEcCCChhHHHHHHhhcCC-CcEEEEE-ecCCchhHHHHHHHHHHHhcCC
Q 008286          295 CTMVYNVAKFVKEWVIYHTKI--GVEKFILYDNGSEDDLQNVVNELNGD-GYNVTTL-LWIWPKTQEAGFSHNAIHAKHS  370 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~l--Gvd~f~IYDn~StD~t~eIL~~y~~~-G~~Vt~i-~Wp~~~~Q~aa~ndcl~r~~~~  370 (571)
                      ++.++|+...|.++|+.-..+  .-.+++|+|++|+|++.++++.+.+. +..+..+ .-+...+-..+.|.++..  ..
T Consensus         2 vip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~--a~   79 (182)
T cd06420           2 IITTYNRPEALELVLKSVLNQSILPFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIAA--AK   79 (182)
T ss_pred             EEeecCChHHHHHHHHHHHhccCCCCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHHH--hc
Confidence            456789999999999886553  23489999999999999999988652 2212221 111111122345555543  46


Q ss_pred             CcEEEEecCCceeec
Q 008286          371 CKWMLYIDVDEFVYS  385 (571)
Q Consensus       371 ~dWVlfiDaDEfL~p  385 (571)
                      .+|++++|+|..+.+
T Consensus        80 g~~i~~lD~D~~~~~   94 (182)
T cd06420          80 GDYLIFIDGDCIPHP   94 (182)
T ss_pred             CCEEEEEcCCcccCH
Confidence            799999999997754

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=97.55  E-value=0.0007  Score=72.54  Aligned_cols=95  Identities=12%  Similarity=0.027  Sum_probs=64.3

Q ss_pred             CceEEEEEEecchHHHHHHHHHHhhhcCc--cEEEEEEcCCChhHHHHHHhhcCC--CcEEEEEecCCc-h-hHHHHHHH
Q 008286          289 KSEICVCTMVYNVAKFVKEWVIYHTKIGV--EKFILYDNGSEDDLQNVVNELNGD--GYNVTTLLWIWP-K-TQEAGFSH  362 (571)
Q Consensus       289 k~~IcVctivkNEa~~L~EwIeyH~~lGv--d~f~IYDn~StD~t~eIL~~y~~~--G~~Vt~i~Wp~~-~-~Q~aa~nd  362 (571)
                      ...++|+.-++||++.|.|+|+.-..+--  -+|+|.|++|+|.+.++++++.+.  ...|.++.-+.. + ..+  .+.
T Consensus        40 ~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K--~~~  117 (373)
T TIGR03472        40 WPPVSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHGPNRK--VSN  117 (373)
T ss_pred             CCCeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCCCChH--HHH
Confidence            44588888899999999999998766543  378889999999999999888653  122433322211 1 111  112


Q ss_pred             HHH-HhcCCCcEEEEecCCceeec
Q 008286          363 NAI-HAKHSCKWMLYIDVDEFVYS  385 (571)
Q Consensus       363 cl~-r~~~~~dWVlfiDaDEfL~p  385 (571)
                      |.. -....+||++++|+|-.+.+
T Consensus       118 l~~~~~~a~ge~i~~~DaD~~~~p  141 (373)
T TIGR03472       118 LINMLPHARHDILVIADSDISVGP  141 (373)
T ss_pred             HHHHHHhccCCEEEEECCCCCcCh
Confidence            221 13457999999999987754

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=97.48  E-value=0.00036  Score=68.03  Aligned_cols=111  Identities=15%  Similarity=0.219  Sum_probs=62.2

Q ss_pred             eEEEEEEecchHHHHHHHHHHhhhc--CccEEEEEEcCCChhHHHHHHhh----cCCCcEEEEEecCCch---hHHHHHH
Q 008286          291 EICVCTMVYNVAKFVKEWVIYHTKI--GVEKFILYDNGSEDDLQNVVNEL----NGDGYNVTTLLWIWPK---TQEAGFS  361 (571)
Q Consensus       291 ~IcVctivkNEa~~L~EwIeyH~~l--Gvd~f~IYDn~StD~t~eIL~~y----~~~G~~Vt~i~Wp~~~---~Q~aa~n  361 (571)
                      .|+|++.++||...|.+.|+....+  .--+++|.||+++|++.++++.+    ...+  ++++.-+...   .-..+.|
T Consensus         2 ~v~Vvip~~~~~~~l~~~l~sl~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~--v~vi~~~~~~g~~~k~~a~n   79 (228)
T PF13641_consen    2 RVSVVIPAYNEDDVLRRCLESLLAQDYPRLEVVVVDDGSDDETAEILRALAARYPRVR--VRVIRRPRNPGPGGKARALN   79 (228)
T ss_dssp             -EEEE--BSS-HHHHHHHHHHHTTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-G--EEEEE----HHHHHHHHHHH
T ss_pred             EEEEEEEecCCHHHHHHHHHHHHcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCc--eEEeecCCCCCcchHHHHHH
Confidence            4788888999999999999985543  22478999999999887776654    3223  3443322211   2234566


Q ss_pred             HHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhc--cCCccEEEEEe
Q 008286          362 HNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQ--LHSIGQVSIRC  415 (571)
Q Consensus       362 dcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~--~p~i~~i~~~w  415 (571)
                      +++...  .++|++++|.|.++.|.          .|..+++.  .++++.+....
T Consensus        80 ~~~~~~--~~d~i~~lD~D~~~~p~----------~l~~~~~~~~~~~~~~v~~~~  123 (228)
T PF13641_consen   80 EALAAA--RGDYILFLDDDTVLDPD----------WLERLLAAFADPGVGAVGGPV  123 (228)
T ss_dssp             HHHHH-----SEEEEE-SSEEE-CH----------HHHHHHHHHHBSS--EEEEEE
T ss_pred             HHHHhc--CCCEEEEECCCcEECHH----------HHHHHHHHHHhCCCCeEeeeE
Confidence            666544  59999999999999652          34443333  46777777443

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

Probab=97.43  E-value=0.0026  Score=55.80  Aligned_cols=90  Identities=16%  Similarity=0.200  Sum_probs=62.7

Q ss_pred             EEEecchHHHHHHHHHHhhhcC--ccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcCCCc
Q 008286          295 CTMVYNVAKFVKEWVIYHTKIG--VEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKHSCK  372 (571)
Q Consensus       295 ctivkNEa~~L~EwIeyH~~lG--vd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~~~d  372 (571)
                      ++.++|+...|.+.|+.-..++  ..+++|+|+++++.+.+.++.+.+....+....-+...+...+.+..+...  ..+
T Consensus         2 ii~~~~~~~~l~~~l~s~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d   79 (156)
T cd00761           2 IIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEENQGLAAARNAGLKAA--RGE   79 (156)
T ss_pred             EEeecCcHHHHHHHHHHHHhCCccceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecCCCChHHHHHHHHHHh--cCC
Confidence            4567899999999998877776  779999999999999999988865311122222222223333344443322  799


Q ss_pred             EEEEecCCceeecC
Q 008286          373 WMLYIDVDEFVYSP  386 (571)
Q Consensus       373 WVlfiDaDEfL~p~  386 (571)
                      |++++|.|..+.+.
T Consensus        80 ~v~~~d~D~~~~~~   93 (156)
T cd00761          80 YILFLDADDLLLPD   93 (156)
T ss_pred             EEEEECCCCccCcc
Confidence            99999999988764

Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function

Probab=97.37  E-value=0.0021  Score=62.09  Aligned_cols=85  Identities=18%  Similarity=0.271  Sum_probs=59.3

Q ss_pred             EEEEEEecchHHHHHHHHHHhhhcC--ccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhcC
Q 008286          292 ICVCTMVYNVAKFVKEWVIYHTKIG--VEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAKH  369 (571)
Q Consensus       292 IcVctivkNEa~~L~EwIeyH~~lG--vd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~~  369 (571)
                      ++|++.++|+++.|.++|+....+=  -.+++|+||+|+|++.++++..   +  +..+.-+  .+.-.+.|..+..+  
T Consensus         1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~evivvdd~s~d~~~~~~~~~---~--~~~~~~~--~g~~~a~n~g~~~a--   71 (221)
T cd02522           1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIVVDGGSTDGTVAIARSA---G--VVVISSP--KGRARQMNAGAAAA--   71 (221)
T ss_pred             CEEEEEccCcHHHHHHHHHHHHhccCCCcEEEEEeCCCCccHHHHHhcC---C--eEEEeCC--cCHHHHHHHHHHhc--
Confidence            4677779999999999998855532  2579999999999999998872   2  2332211  12223445444433  


Q ss_pred             CCcEEEEecCCceeec
Q 008286          370 SCKWMLYIDVDEFVYS  385 (571)
Q Consensus       370 ~~dWVlfiDaDEfL~p  385 (571)
                      ..+|++++|.|..+.+
T Consensus        72 ~~~~i~~~D~D~~~~~   87 (221)
T cd02522          72 RGDWLLFLHADTRLPP   87 (221)
T ss_pred             cCCEEEEEcCCCCCCh
Confidence            4799999999998865

Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional

Probab=97.09  E-value=0.0047  Score=73.05  Aligned_cols=115  Identities=11%  Similarity=0.152  Sum_probs=73.2

Q ss_pred             ceEEEEEEecchHH-HHHHHHHHhhhcCc--c--EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCc-hhHHHHHHHH
Q 008286          290 SEICVCTMVYNVAK-FVKEWVIYHTKIGV--E--KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWP-KTQEAGFSHN  363 (571)
Q Consensus       290 ~~IcVctivkNEa~-~L~EwIeyH~~lGv--d--~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~-~~Q~aa~ndc  363 (571)
                      ..++|.+-++||+. .+.+.|..-..+--  +  +|+|.||+|+|++.++++++   |  +.++.=+.. ++-..+.|+.
T Consensus       260 P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~~~---~--v~yI~R~~n~~gKAGnLN~a  334 (852)
T PRK11498        260 PTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQEV---G--VKYIARPTHEHAKAGNINNA  334 (852)
T ss_pred             CcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHHHC---C--cEEEEeCCCCcchHHHHHHH
Confidence            46888888999985 45667765322211  1  79999999999999999986   3  333322222 2223456777


Q ss_pred             HHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEeeee
Q 008286          364 AIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDF  418 (571)
Q Consensus       364 l~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w~~F  418 (571)
                      +..  .+.|||+++|+|-.+.+.      .+...+ .++.+.|+++.+..+...+
T Consensus       335 L~~--a~GEyIavlDAD~ip~pd------fL~~~V-~~f~~dP~VglVQtp~~f~  380 (852)
T PRK11498        335 LKY--AKGEFVAIFDCDHVPTRS------FLQMTM-GWFLKDKKLAMMQTPHHFF  380 (852)
T ss_pred             HHh--CCCCEEEEECCCCCCChH------HHHHHH-HHHHhCCCeEEEEcceecc
Confidence            654  367999999999986542      122222 2333457888877654444

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=97.07  E-value=0.0038  Score=63.59  Aligned_cols=83  Identities=14%  Similarity=0.102  Sum_probs=58.4

Q ss_pred             ecch-HHHHHHHHHHhhhcCccEEEEEEcCCCh--hHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHhc-CCCcE
Q 008286          298 VYNV-AKFVKEWVIYHTKIGVEKFILYDNGSED--DLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHAK-HSCKW  373 (571)
Q Consensus       298 vkNE-a~~L~EwIeyH~~lGvd~f~IYDn~StD--~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~~-~~~dW  373 (571)
                      ++|. ...|.++|+.-.. ...+|+|+||+|+|  .+.++++.+.    .|+++.-+...+-..|+|..+..+. .++||
T Consensus         2 tyn~~~~~l~~~l~sl~~-q~~~iiVVDN~S~~~~~~~~~~~~~~----~i~~i~~~~N~G~a~a~N~Gi~~a~~~~~d~   76 (281)
T TIGR01556         2 TFNPDLEHLGELITSLPK-QVDRIIAVDNSPHSDQPLKNARLRGQ----KIALIHLGDNQGIAGAQNQGLDASFRRGVQG   76 (281)
T ss_pred             ccCccHHHHHHHHHHHHh-cCCEEEEEECcCCCcHhHHHHhccCC----CeEEEECCCCcchHHHHHHHHHHHHHCCCCE
Confidence            5674 6889999987544 36899999999874  3444444332    3666665555555667776665543 47899


Q ss_pred             EEEecCCceeec
Q 008286          374 MLYIDVDEFVYS  385 (571)
Q Consensus       374 VlfiDaDEfL~p  385 (571)
                      |+++|.|-.+.+
T Consensus        77 i~~lD~D~~~~~   88 (281)
T TIGR01556        77 VLLLDQDSRPGN   88 (281)
T ss_pred             EEEECCCCCCCH
Confidence            999999998875

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=96.65  E-value=0.024  Score=59.07  Aligned_cols=94  Identities=18%  Similarity=0.147  Sum_probs=68.2

Q ss_pred             ceEEEEEEecchHHHHHHHHHHhhhcCc--cEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHh
Q 008286          290 SEICVCTMVYNVAKFVKEWVIYHTKIGV--EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHA  367 (571)
Q Consensus       290 ~~IcVctivkNEa~~L~EwIeyH~~lGv--d~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~  367 (571)
                      ..+++++..+|..+.+.++|+....+..  +++++.||+|+|++.+.++... .+ +|..+.-+.+.+=..++|.-+..+
T Consensus         3 ~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~-~~-~v~~i~~~~NlG~agg~n~g~~~a   80 (305)
T COG1216           3 PKISIIIVTYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARF-FP-NVRLIENGENLGFAGGFNRGIKYA   80 (305)
T ss_pred             cceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhc-CC-cEEEEEcCCCccchhhhhHHHHHH
Confidence            4678888899999999999998877765  3444579999999999998862 11 366665555545556677666655


Q ss_pred             cCC-CcEEEEecCCceeec
Q 008286          368 KHS-CKWMLYIDVDEFVYS  385 (571)
Q Consensus       368 ~~~-~dWVlfiDaDEfL~p  385 (571)
                      ... .+|+++++-|.++.+
T Consensus        81 ~~~~~~~~l~LN~D~~~~~   99 (305)
T COG1216          81 LAKGDDYVLLLNPDTVVEP   99 (305)
T ss_pred             hcCCCcEEEEEcCCeeeCh
Confidence            444 349999999944443

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=96.46  E-value=0.019  Score=61.76  Aligned_cols=103  Identities=17%  Similarity=0.238  Sum_probs=74.2

Q ss_pred             ceEEEEEEecchHH-HHHHHHHHhhhcCcc--EEEEEEcCCChhHHHHHHhhcCCC-cEEEEEecC--CchhHHHHHHHH
Q 008286          290 SEICVCTMVYNVAK-FVKEWVIYHTKIGVE--KFILYDNGSEDDLQNVVNELNGDG-YNVTTLLWI--WPKTQEAGFSHN  363 (571)
Q Consensus       290 ~~IcVctivkNEa~-~L~EwIeyH~~lGvd--~f~IYDn~StD~t~eIL~~y~~~G-~~Vt~i~Wp--~~~~Q~aa~ndc  363 (571)
                      ..+++.+-++||+. .+.++|+....+...  +++++|++++|++.++++++.++- .++... .+  ..++-..+.|..
T Consensus        54 p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~gK~~al~~~  132 (439)
T COG1215          54 PKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVI-YPEKKNGGKAGALNNG  132 (439)
T ss_pred             CceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEE-eccccCccchHHHHHH
Confidence            67888888999998 899999997666543  899999999999999999997652 112222 22  122223455666


Q ss_pred             HHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhcc
Q 008286          364 AIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQL  405 (571)
Q Consensus       364 l~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~  405 (571)
                      +..+  ..|+|+++|+|=.+.+.          .|.+++...
T Consensus       133 l~~~--~~d~V~~~DaD~~~~~d----------~l~~~~~~f  162 (439)
T COG1215         133 LKRA--KGDVVVILDADTVPEPD----------ALRELVSPF  162 (439)
T ss_pred             Hhhc--CCCEEEEEcCCCCCChh----------HHHHHHhhh
Confidence            5544  49999999999988863          566666654

>PRK14716 bacteriophage N4 adsorption protein B; Provisional

Probab=96.45  E-value=0.038  Score=62.11  Aligned_cols=98  Identities=8%  Similarity=0.084  Sum_probs=66.4

Q ss_pred             CceEEEEEEecchHHHHHHHHHHhh-hcCcc--EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecC--CchhHHHHHHHH
Q 008286          289 KSEICVCTMVYNVAKFVKEWVIYHT-KIGVE--KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWI--WPKTQEAGFSHN  363 (571)
Q Consensus       289 k~~IcVctivkNEa~~L~EwIeyH~-~lGvd--~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp--~~~~Q~aa~ndc  363 (571)
                      ...++|.+-.+||++.|.+.|++-. .+--+  +|+|.+.+++|+|.++++.+.++.-+++.+.-+  +..+...++|..
T Consensus        65 ~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv~~~~gp~~Ka~aLN~~  144 (504)
T PRK14716         65 EKRIAIFVPAWREADVIGRMLEHNLATLDYENYRIFVGTYPNDPATLREVDRLAARYPRVHLVIVPHDGPTSKADCLNWI  144 (504)
T ss_pred             CCceEEEEeccCchhHHHHHHHHHHHcCCCCCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEEeCCCCCCCHHHHHHHH
Confidence            4568888889999999999999742 22222  789999999999999999876543223322222  222333456655


Q ss_pred             HHHh------c-CCCcEEEEecCCceeecC
Q 008286          364 AIHA------K-HSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       364 l~r~------~-~~~dWVlfiDaDEfL~p~  386 (571)
                      +...      . ..+++++++|+|-.+.|.
T Consensus       145 l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd  174 (504)
T PRK14716        145 YQAIFAFERERGIRFAIIVLHDAEDVIHPL  174 (504)
T ss_pred             HHHHHHhhhhcCCCcCEEEEEcCCCCcCcc
Confidence            4321      1 246999999999998874

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)

Probab=96.45  E-value=0.025  Score=66.13  Aligned_cols=116  Identities=13%  Similarity=0.143  Sum_probs=69.3

Q ss_pred             ceEEEEEEecchHHHH-HHHHHHhhhcCc--c--EEEEEEcCCChhH--------------HHHHHhhcC-CCcEEEEEe
Q 008286          290 SEICVCTMVYNVAKFV-KEWVIYHTKIGV--E--KFILYDNGSEDDL--------------QNVVNELNG-DGYNVTTLL  349 (571)
Q Consensus       290 ~~IcVctivkNEa~~L-~EwIeyH~~lGv--d--~f~IYDn~StD~t--------------~eIL~~y~~-~G~~Vt~i~  349 (571)
                      ..++|++-++||+..+ .+.|+.-..+--  +  +|+|.|++|+|+|              .+.++.+.+ .|  +.++.
T Consensus       131 P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~--v~yi~  208 (713)
T TIGR03030       131 PTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLG--VNYIT  208 (713)
T ss_pred             CeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcC--cEEEE
Confidence            4788888899998655 567776433322  2  7999999999986              233444432 23  33332


Q ss_pred             cCCc-hhHHHHHHHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEee
Q 008286          350 WIWP-KTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCL  416 (571)
Q Consensus       350 Wp~~-~~Q~aa~ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w~  416 (571)
                      =+.. +.-..+.|+++.++  +.|||+++|+|-.+.+.      .....+ ..+.+.|+++.+..+-.
T Consensus       209 r~~n~~~KAgnLN~al~~a--~gd~Il~lDAD~v~~pd------~L~~~v-~~f~~dp~v~~Vqtp~~  267 (713)
T TIGR03030       209 RPRNVHAKAGNINNALKHT--DGELILIFDADHVPTRD------FLQRTV-GWFVEDPKLFLVQTPHF  267 (713)
T ss_pred             CCCCCCCChHHHHHHHHhc--CCCEEEEECCCCCcChh------HHHHHH-HHHHhCCCEEEEeCCee
Confidence            2222 12234567776543  56999999999998753      122222 23333467776655433

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.

>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni []

Probab=96.29  E-value=0.018  Score=60.40  Aligned_cols=123  Identities=14%  Similarity=0.141  Sum_probs=75.8

Q ss_pred             CCCceEEEEEEecchHHHHHHHHHHhhhcCccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCc------h---hHH
Q 008286          287 EPKSEICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWP------K---TQE  357 (571)
Q Consensus       287 ~~k~~IcVctivkNEa~~L~EwIeyH~~lGvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~------~---~Q~  357 (571)
                      +.....++..-++||+.+|.++|+.+.- -+|+.+|--|+|+|+|.+|+.++.+.--.-..+..|..      .   .+.
T Consensus        84 ~~pl~~~~~iRvKnE~~tl~~si~S~Lp-ai~~gVI~yNdc~D~t~Eiil~fckkyP~fip~~Ypy~v~~~n~~~~~n~l  162 (347)
T PF06306_consen   84 KSPLNPWAFIRVKNEAMTLAESIESILP-AIDEGVIGYNDCTDGTEEIILEFCKKYPSFIPIKYPYEVIIKNPKSEENSL  162 (347)
T ss_pred             CCCCCcceEEEEcchhhhHHHHHHHHHH-HHhccEEEeecCCCCHHHHHHHHHHhCcccccccCcchhhccCCchhhhhh
Confidence            3445567777899999999999999633 46999999999999999999988664210000111210      1   111


Q ss_pred             HHHHHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEeeeec
Q 008286          358 AGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFG  419 (571)
Q Consensus       358 aa~ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w~~Fg  419 (571)
                      ..|-+-.+.-....+|++=+|+|-+..+.         ..+..+---..+.+++.+++.+|.
T Consensus       163 ~~YYNy~ls~ipk~~w~iKID~DhIy~~~---------KL~ksfY~pk~~~~~v~YsRINF~  215 (347)
T PF06306_consen  163 YNYYNYVLSFIPKNEWAIKIDADHIYDTK---------KLYKSFYIPKNDYDVVSYSRINFH  215 (347)
T ss_pred             hhhhhhhhcccccceEEEEeccceeecHH---------HHhhhheeeccccceEEecceeEE
Confidence            11111112122467999999999999875         223332221235567776666653

>PRK05454 glucosyltransferase MdoH; Provisional

Probab=95.74  E-value=0.11  Score=60.52  Aligned_cols=119  Identities=13%  Similarity=0.202  Sum_probs=74.0

Q ss_pred             CCceEEEEEEecchHH-----HHHHHHHHhhhcCc-c--EEEEEEcCCChhHHH--------HHHhhcCCCcEEEEEecC
Q 008286          288 PKSEICVCTMVYNVAK-----FVKEWVIYHTKIGV-E--KFILYDNGSEDDLQN--------VVNELNGDGYNVTTLLWI  351 (571)
Q Consensus       288 ~k~~IcVctivkNEa~-----~L~EwIeyH~~lGv-d--~f~IYDn~StD~t~e--------IL~~y~~~G~~Vt~i~Wp  351 (571)
                      ....++|..-++||+.     .|++.++.-..++- +  +|+|.|++++|++..        +.++|...+ +|.+..=.
T Consensus       122 ~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~-~i~yr~R~  200 (691)
T PRK05454        122 PEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEG-RIFYRRRR  200 (691)
T ss_pred             CCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCC-cEEEEECC
Confidence            4456788878999974     57777765433433 2  689999999988643        344453322 24443212


Q ss_pred             CchhHH-HHHHHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhh---hccCCccEEEEEeee
Q 008286          352 WPKTQE-AGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALI---PQLHSIGQVSIRCLD  417 (571)
Q Consensus       352 ~~~~Q~-aa~ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL---~~~p~i~~i~~~w~~  417 (571)
                      .+..-+ ...++.+.+....+|||+.+|+|-.+.+.          .|..++   +..|++|.++.+...
T Consensus       201 ~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d----------~L~~lv~~m~~dP~vGlVQt~~~~  260 (691)
T PRK05454        201 RNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGD----------TLVRLVRLMEANPRAGLIQTLPVA  260 (691)
T ss_pred             cCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHH----------HHHHHHHHHhhCcCEEEEeCCccC
Confidence            222223 34556566666789999999999998873          344444   345788888755443

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin

Probab=95.32  E-value=0.092  Score=52.68  Aligned_cols=98  Identities=17%  Similarity=0.099  Sum_probs=59.7

Q ss_pred             EEEEecchH-HHHHHHHHHhhhcCcc------------EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHH
Q 008286          294 VCTMVYNVA-KFVKEWVIYHTKIGVE------------KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGF  360 (571)
Q Consensus       294 VctivkNEa-~~L~EwIeyH~~lGvd------------~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~  360 (571)
                      |++-++||+ +.|.+.|+.-..+-..            +|+|.++||+|         .+.|-         ...|...+
T Consensus         1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d---------~~~gk---------~~~~~~~~   62 (244)
T cd04190           1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK---------KNRGK---------RDSQLWFF   62 (244)
T ss_pred             CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc---------ccCcc---------hHHHHHHH
Confidence            345589996 8999999986666554            78999999999         11221         01222112


Q ss_pred             HHH-HHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEee
Q 008286          361 SHN-AIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCL  416 (571)
Q Consensus       361 ndc-l~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w~  416 (571)
                      +-. ........+||+++|+|=.+.+.       .-..+...+...|+++++.-...
T Consensus        63 ~~~~~~~~~a~~e~i~~~DaD~~~~~~-------~l~~l~~~~~~~p~vg~v~g~~~  112 (244)
T cd04190          63 NYFCRVLFPDDPEFILLVDADTKFDPD-------SIVQLYKAMDKDPEIGGVCGEIH  112 (244)
T ss_pred             HHHHHHhhcCCCCEEEEECCCCcCCHh-------HHHHHHHHHHhCCCEEEEEeeeE
Confidence            110 11124578999999999999763       12223333434567777655443

Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan

Probab=95.18  E-value=0.24  Score=50.68  Aligned_cols=119  Identities=13%  Similarity=0.100  Sum_probs=66.9

Q ss_pred             EEEEEecchHHH-HHHHHHHhhh----cCc---cEEEEEEcCCChhHHH--------HHHhhcCCCcEEEEEecCCchhH
Q 008286          293 CVCTMVYNVAKF-VKEWVIYHTK----IGV---EKFILYDNGSEDDLQN--------VVNELNGDGYNVTTLLWIWPKTQ  356 (571)
Q Consensus       293 cVctivkNEa~~-L~EwIeyH~~----lGv---d~f~IYDn~StD~t~e--------IL~~y~~~G~~Vt~i~Wp~~~~Q  356 (571)
                      +|..-++||... |.+.|+....    ++.   =+|+|.|+++++....        +.+.+.+ +..|.++.=+...+-
T Consensus         2 SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~-~~~v~~~~r~~~~g~   80 (254)
T cd04191           2 AIVMPVYNEDPARVFAGLRAMYESLAKTGLADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGA-QGRIYYRRRRENTGR   80 (254)
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCceEEEEECCCCChHHHHHHHHHHHHHHHHhCC-CCcEEEEEcCCCCCc
Confidence            566668898765 6666655321    232   2688888877765421        3344543 444544332222222


Q ss_pred             H-HHHHHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEeeeec
Q 008286          357 E-AGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFG  419 (571)
Q Consensus       357 ~-aa~ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w~~Fg  419 (571)
                      + +.++..+......+++|+++|+|-.+.|.      .+...+ ..+.+.|+++.+..+...+.
T Consensus        81 Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~------~l~~~v-~~~~~~~~vg~vq~~~~~~n  137 (254)
T cd04191          81 KAGNIADFCRRWGSRYDYMVVLDADSLMSGD------TIVRLV-RRMEANPRAGIIQTAPKLIG  137 (254)
T ss_pred             cHHHHHHHHHHhCCCCCEEEEEeCCCCCCHH------HHHHHH-HHHHhCCCEEEEeCCceeEC
Confidence            3 33444443323578999999999999874      122222 22333578888876665544

Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]

Probab=93.55  E-value=1.1  Score=46.19  Aligned_cols=90  Identities=13%  Similarity=0.179  Sum_probs=52.1

Q ss_pred             EEEEecchH------HHHHHHHHHhhh---cCccEEEEEEcCCChhHHHHHHhhcC-CCcEEEEEecCCc---hhHHHHH
Q 008286          294 VCTMVYNVA------KFVKEWVIYHTK---IGVEKFILYDNGSEDDLQNVVNELNG-DGYNVTTLLWIWP---KTQEAGF  360 (571)
Q Consensus       294 VctivkNEa------~~L~EwIeyH~~---lGvd~f~IYDn~StD~t~eIL~~y~~-~G~~Vt~i~Wp~~---~~Q~aa~  360 (571)
                      |++-++|..      +.|..+|+.-..   ..--+|+|.|++|++.+.+.|+.+.+ .+. +.++.-...   -.+..+.
T Consensus         2 iIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~-~~~i~~~~~~~~f~~a~ar   80 (281)
T PF10111_consen    2 IIIPVRNRSERPDILERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGF-IRYIRHEDNGEPFSRAKAR   80 (281)
T ss_pred             EEEEecCCccchHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCc-eEEEEcCCCCCCcCHHHHH
Confidence            444466654      345444444322   12238999999999988666665644 343 323222211   1344444


Q ss_pred             HHHHHHhcCCCcEEEEecCCceeecC
Q 008286          361 SHNAIHAKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       361 ndcl~r~~~~~dWVlfiDaDEfL~p~  386 (571)
                      |-.+.  ...++||+|+|+|=++.+.
T Consensus        81 N~g~~--~A~~d~l~flD~D~i~~~~  104 (281)
T PF10111_consen   81 NIGAK--YARGDYLIFLDADCIPSPD  104 (281)
T ss_pred             HHHHH--HcCCCEEEEEcCCeeeCHH
Confidence            44443  3489999999999988763

>KOG2977 consensus Glycosyltransferase [General function prediction only]

Probab=93.33  E-value=0.56  Score=48.92  Aligned_cols=96  Identities=20%  Similarity=0.241  Sum_probs=61.8

Q ss_pred             CCCceEEEEEEecchHH----HHHHHHHHhhh--cC----ccEEEEEEcCCChhHHHHHHhhc-CCCc-EEEEEecCCch
Q 008286          287 EPKSEICVCTMVYNVAK----FVKEWVIYHTK--IG----VEKFILYDNGSEDDLQNVVNELN-GDGY-NVTTLLWIWPK  354 (571)
Q Consensus       287 ~~k~~IcVctivkNEa~----~L~EwIeyH~~--lG----vd~f~IYDn~StD~t~eIL~~y~-~~G~-~Vt~i~Wp~~~  354 (571)
                      ..++.++|++-.+||..    .|.|++.|...  .+    =.+++|.|+||+|.|.+++-.|. +.|. ++-++..-.+.
T Consensus        64 ~~~~~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~nr  143 (323)
T KOG2977|consen   64 PEKMYLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKNR  143 (323)
T ss_pred             hhhceeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhccC
Confidence            35569999999999964    56888888443  23    35899999999999999988887 4554 34444332111


Q ss_pred             hHHHHHHHHHHHhcCCCcEEEEecCCceee
Q 008286          355 TQEAGFSHNAIHAKHSCKWMLYIDVDEFVY  384 (571)
Q Consensus       355 ~Q~aa~ndcl~r~~~~~dWVlfiDaDEfL~  384 (571)
                      +.-.+...-++  ....+.++|.|+|----
T Consensus       144 gKGgAvR~g~l--~~rG~~ilfadAdGaTk  171 (323)
T KOG2977|consen  144 GKGGAVRKGML--SSRGQKILFADADGATK  171 (323)
T ss_pred             CCCcceehhhH--hccCceEEEEcCCCCcc
Confidence            11111111121  22668899999996433

>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]

Probab=92.49  E-value=1.2  Score=44.01  Aligned_cols=102  Identities=17%  Similarity=0.190  Sum_probs=61.6

Q ss_pred             EEEEEEecchHHHHH--HHH--HHhhhcCcc-EEEEEEcCCChhHHHHHHhhcC--CCcEEEEEecCCchhHHHHHHHHH
Q 008286          292 ICVCTMVYNVAKFVK--EWV--IYHTKIGVE-KFILYDNGSEDDLQNVVNELNG--DGYNVTTLLWIWPKTQEAGFSHNA  364 (571)
Q Consensus       292 IcVctivkNEa~~L~--EwI--eyH~~lGvd-~f~IYDn~StD~t~eIL~~y~~--~G~~Vt~i~Wp~~~~Q~aa~ndcl  364 (571)
                      .+|..-++||-..|.  -|+  .+....|.+ +++|.|++|-|+|.++++.+.+  -+.+|-..+=-...+--.||-|.+
T Consensus         5 YsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~klGLgtAy~hgl   84 (238)
T KOG2978|consen    5 YSVILPTYNEKENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKKLGLGTAYIHGL   84 (238)
T ss_pred             eeEEeccccCCCCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCcccchHHHHhhh
Confidence            445555677754432  122  223334664 8999999999999999999653  123455443222222234455554


Q ss_pred             HHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhcc
Q 008286          365 IHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQL  405 (571)
Q Consensus       365 ~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~  405 (571)
                      .  .+..++++.+|+|=-=.|          ..|.++++..
T Consensus        85 ~--~a~g~fiviMDaDlsHhP----------k~ipe~i~lq  113 (238)
T KOG2978|consen   85 K--HATGDFIVIMDADLSHHP----------KFIPEFIRLQ  113 (238)
T ss_pred             h--hccCCeEEEEeCccCCCc----------hhHHHHHHHh
Confidence            3  337899999999954443          4677877754

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides

Probab=91.17  E-value=2.7  Score=45.06  Aligned_cols=114  Identities=11%  Similarity=0.113  Sum_probs=71.8

Q ss_pred             EEEEEEecchHHHHHHHHHHhhhc--Cc--cEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhH-----------
Q 008286          292 ICVCTMVYNVAKFVKEWVIYHTKI--GV--EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQ-----------  356 (571)
Q Consensus       292 IcVctivkNEa~~L~EwIeyH~~l--Gv--d~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q-----------  356 (571)
                      +.|+.+++|-.+.|.+.|+.-..+  ++  .+++|+++|+.+++.++++.|.. +  |..+..+..+..           
T Consensus         2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~~-~--i~~i~~~~~~~~~~~~~~~~~~y   78 (334)
T cd02514           2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFGD-G--VTHIQHPPISIKNVNPPHKFQGY   78 (334)
T ss_pred             cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhcc-c--cEEEEcccccccccCcccccchh
Confidence            357778999999999998886554  44  48999999999999999988842 2  333322211101           


Q ss_pred             -------HHHHHHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEE
Q 008286          357 -------EAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIR  414 (571)
Q Consensus       357 -------~aa~ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~  414 (571)
                             ..+.+..+.  ....+.++++|-|=.+.|.--    .--..+.++++..+.+.+|+-.
T Consensus        79 ~~ia~hyk~aln~vF~--~~~~~~vIILEDDl~~sPdFf----~yf~~~l~~y~~D~~v~~ISa~  137 (334)
T cd02514          79 YRIARHYKWALTQTFN--LFGYSFVIILEDDLDIAPDFF----SYFQATLPLLEEDPSLWCISAW  137 (334)
T ss_pred             hHHHHHHHHHHHHHHH--hcCCCEEEEECCCCccCHhHH----HHHHHHHHHHhcCCCEEEEEee
Confidence                   013444433  236899999999988887400    0012233445555667776643

Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional

Probab=90.70  E-value=1.7  Score=51.13  Aligned_cols=98  Identities=6%  Similarity=0.045  Sum_probs=65.3

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHhh-hcCc--cEEEEEEcCCChhHHHHHHhhcCC-CcEEEE--EecCCchhHHHHHH
Q 008286          288 PKSEICVCTMVYNVAKFVKEWVIYHT-KIGV--EKFILYDNGSEDDLQNVVNELNGD-GYNVTT--LLWIWPKTQEAGFS  361 (571)
Q Consensus       288 ~k~~IcVctivkNEa~~L~EwIeyH~-~lGv--d~f~IYDn~StD~t~eIL~~y~~~-G~~Vt~--i~Wp~~~~Q~aa~n  361 (571)
                      ....++|..-.+||+..|.+.|++-. .+--  =+|++.++.++|.|.++++.+.+. +- +..  ..=++..+-..++|
T Consensus        61 ~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~~eI~vi~~~nD~~T~~~~~~l~~~~p~-~~~v~~~~~g~~gKa~aLN  139 (727)
T PRK11234         61 DEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPATQADVDAVCARFPN-VHKVVCARPGPTSKADCLN  139 (727)
T ss_pred             CCCCEEEEEecCcchhhHHHHHHHHHHhCCCCCeEEEEEecCCChhHHHHHHHHHHHCCC-cEEEEeCCCCCCCHHHHHH
Confidence            34567777779999999999998742 2222  167777778888999999888643 21 222  22233444445677


Q ss_pred             HHHHHh-------cCCCcEEEEecCCceeecC
Q 008286          362 HNAIHA-------KHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       362 dcl~r~-------~~~~dWVlfiDaDEfL~p~  386 (571)
                      +.+...       ..+++.++++|+|-.+.|.
T Consensus       140 ~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd  171 (727)
T PRK11234        140 NVLDAITQFERSANFAFAGFILHDAEDVISPM  171 (727)
T ss_pred             HHHHHHHhhhcccCCcccEEEEEcCCCCCChh
Confidence            665543       3356778889999999874

>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function

Probab=88.11  E-value=9.9  Score=39.60  Aligned_cols=110  Identities=17%  Similarity=0.214  Sum_probs=68.6

Q ss_pred             CCCceEEEEEEecchHHHHHHHHHHhhhcCcc----EEEEEEcCCC--hhHHHHHHhhcCC---------Cc-EEEEE--
Q 008286          287 EPKSEICVCTMVYNVAKFVKEWVIYHTKIGVE----KFILYDNGSE--DDLQNVVNELNGD---------GY-NVTTL--  348 (571)
Q Consensus       287 ~~k~~IcVctivkNEa~~L~EwIeyH~~lGvd----~f~IYDn~St--D~t~eIL~~y~~~---------G~-~Vt~i--  348 (571)
                      ..+-.|-|++-++|.+.++.++.+.-..+--.    .+-+..++++  |++.+.|+.+.+.         .+ .|++.  
T Consensus        22 ~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl~~  101 (269)
T PF03452_consen   22 RNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITILRK  101 (269)
T ss_pred             ccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEEcC
Confidence            45677888888999999999998875444332    3445566666  8888887754311         12 24433  


Q ss_pred             ecCC-----------chhHHH-------HHHHHHHHhcC-CCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhcc
Q 008286          349 LWIW-----------PKTQEA-------GFSHNAIHAKH-SCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQL  405 (571)
Q Consensus       349 ~Wp~-----------~~~Q~a-------a~ndcl~r~~~-~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~  405 (571)
                      ++..           ...|..       +=|.-+..+.. .++||+++|+|=...|+         ..|+++++..
T Consensus       102 df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~---------~lI~dli~~~  168 (269)
T PF03452_consen  102 DFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPP---------TLIQDLIAHD  168 (269)
T ss_pred             CCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCCh---------HHHHHHHhCC
Confidence            2211           112321       11222233334 78999999999987775         5788888854

These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	571
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	98.71
3bcv_A	240	Putative glycosyltransferase protein; protein stru	98.5
3ckj_A	329	Putative uncharacterized protein; mycobacteria, un	98.25
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	98.25
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	98.07
3f1y_A	387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	98.02
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	97.98
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	97.9
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	97.88
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	97.65
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	97.6
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	97.04
2wvl_A	391	Mannosyl-3-phosphoglycerate synthase; GT-A fold, t	96.6
2bo4_A	397	Mannosylglycerate synthase; catalysis, glycosyltra	96.53
2nxv_A	249	ATP synthase subunits region ORF 6; majastridin, A	96.05
2zu9_A	394	Mannosyl-3-phosphoglycerate synthase; GT-A fold, g	94.43
2fy7_A	287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	92.52
2l82_A	162	Designed protein OR32; structural genomics, northe	80.55

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=98.71  E-value=1.8e-07  Score=91.03  Aligned_cols=118  Identities=12%  Similarity=0.107  Sum_probs=86.7

Q ss_pred             eEEEEEEecchHHHHHHHHHHhhhcCcc--EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecC--------CchhHHHHH
Q 008286          291 EICVCTMVYNVAKFVKEWVIYHTKIGVE--KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWI--------WPKTQEAGF  360 (571)
Q Consensus       291 ~IcVctivkNEa~~L~EwIeyH~~lGvd--~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp--------~~~~Q~aa~  360 (571)
                      .|+|++.++|++++|.++|+.-..+-..  +++|+|++|+|+|.++++.+.+.. .|.++.-+        ...+...+.
T Consensus         2 ~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~~~-~i~~i~~~~~~~~~~~~n~G~~~a~   80 (255)
T 1qg8_A            2 KVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDN-RVRFYQSDISGVKERTEKTRYAALI   80 (255)
T ss_dssp             CEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGGST-TEEEEECCCCSHHHHHSSCHHHHHH
T ss_pred             eEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhhcC-CEEEEecccccccccccccCHHHHH
Confidence            5788888999999999999997665442  899999999999999999996522 36666555        345566677


Q ss_pred             HHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEeeee
Q 008286          361 SHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDF  418 (571)
Q Consensus       361 ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w~~F  418 (571)
                      |.++..+  ..+||+|+|.|.++.+.       .-..+.+.+.+.|+++.+.-....+
T Consensus        81 N~gi~~a--~g~~i~~lD~Dd~~~~~-------~l~~~~~~~~~~~~~~~v~~~~~~~  129 (255)
T 1qg8_A           81 NQAIEMA--EGEYITYATDDNIYMPD-------RLLKMVRELDTHPEKAVIYSASKTY  129 (255)
T ss_dssp             HHHHHHC--CCSEEEEEETTEEECTT-------HHHHHHHHHHHCTTCCEEEEEEEEE
T ss_pred             HHHHHHc--CCCEEEEeCCCCccChH-------HHHHHHHHHHhCCCceEEEeceEEE
Confidence            7777544  77999999999999764       2344555555556777665544433

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=98.50  E-value=4.5e-07  Score=87.14  Aligned_cols=94  Identities=18%  Similarity=0.266  Sum_probs=71.9

Q ss_pred             ceEEEEEEecchHHHHHHHHHHhhhcCcc--EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHHHh
Q 008286          290 SEICVCTMVYNVAKFVKEWVIYHTKIGVE--KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAIHA  367 (571)
Q Consensus       290 ~~IcVctivkNEa~~L~EwIeyH~~lGvd--~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~r~  367 (571)
                      ..|+|++.++|++++|.++|+.-..+-..  +++|+||+|+|+|.++++.+.+..-.|.++. ....+...+.|.++..+
T Consensus         5 p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~~n~G~~~a~N~g~~~a   83 (240)
T 3bcv_A            5 PKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-KKNAGLGMACNSGLDVA   83 (240)
T ss_dssp             CSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-CCCCCHHHHHHHHHHHC
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-CCCCChHHHHHHHHHHc
Confidence            46888888999999999999986655432  8999999999999999999864322255554 33445566777776554


Q ss_pred             cCCCcEEEEecCCceeecC
Q 008286          368 KHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       368 ~~~~dWVlfiDaDEfL~p~  386 (571)
                        ..+||+|+|.|.++.+.
T Consensus        84 --~g~~i~~lD~Dd~~~~~  100 (240)
T 3bcv_A           84 --TGEYVAFCDSDDYVDSD  100 (240)
T ss_dssp             --CSSEEEECCTTCCCCTT
T ss_pred             --CCCEEEEECCCCcCCHH
Confidence              67999999999988763

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A

Probab=98.25  E-value=8.4e-06  Score=83.74  Aligned_cols=116  Identities=14%  Similarity=0.086  Sum_probs=80.6

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHhhhc--C-ccEEEEEEcCCChhHHHHHHhhcCCCcEEEE---E-ecCCchhHHHHH
Q 008286          288 PKSEICVCTMVYNVAKFVKEWVIYHTKI--G-VEKFILYDNGSEDDLQNVVNELNGDGYNVTT---L-LWIWPKTQEAGF  360 (571)
Q Consensus       288 ~k~~IcVctivkNEa~~L~EwIeyH~~l--G-vd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~---i-~Wp~~~~Q~aa~  360 (571)
                      .+..|+|++.++|++++|.++|+.-..+  . ..+|+|.|++|+|+|.++++.+...-  +..   + ..+...+...+.
T Consensus        46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~--~~~~~~~~~~~~n~G~~~a~  123 (329)
T 3ckj_A           46 AGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARV--VSREQALPEVPIRPGKGEAL  123 (329)
T ss_dssp             TTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEE--EEHHHHCTTSCCCCSHHHHH
T ss_pred             cCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhh--ccceeeeccCCCCCCHHHHH
Confidence            4467999999999999999999987665  2 36899999999999999999985421  111   1 123445566677


Q ss_pred             HHHHHHhcCCCcEEEEecCCce-eecCCCCCCCCcHHHHHHhhhccCCccEEEEE
Q 008286          361 SHNAIHAKHSCKWMLYIDVDEF-VYSPSWHDSGPSKHLLKALIPQLHSIGQVSIR  414 (571)
Q Consensus       361 ndcl~r~~~~~dWVlfiDaDEf-L~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~  414 (571)
                      |.++..+  ..+||+|+|+|.. +.+.       .-..+.+.+.+.++++.+.-.
T Consensus       124 n~g~~~a--~gd~i~~lD~D~~~~~p~-------~l~~l~~~l~~~~~~~~v~g~  169 (329)
T 3ckj_A          124 WRSLAAS--RGDIVVFVDSDLINPHPM-------FVPWLVGPLLTGDGVHLVKSF  169 (329)
T ss_dssp             HHHHHHC--CCSEEEECCTTEESCCTT-------HHHHHHHHHHSCSSCCEEEEE
T ss_pred             HHHHHhC--CCCEEEEECCCCCCcChH-------HHHHHHHHHHhCCCccEEEEE
Confidence            7777544  6799999999999 6653       223333433334566655433

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=98.25  E-value=7.6e-06  Score=90.76  Aligned_cols=122  Identities=15%  Similarity=0.124  Sum_probs=85.2

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHhhhcCc--cEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHHHH
Q 008286          288 PKSEICVCTMVYNVAKFVKEWVIYHTKIGV--EKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHNAI  365 (571)
Q Consensus       288 ~k~~IcVctivkNEa~~L~EwIeyH~~lGv--d~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndcl~  365 (571)
                      ....|+|++.++|++++|.++|+.-..+-.  -+++|+|++|+|+|.++++.+.+..-.|.++. ....+...+.|.++.
T Consensus       373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~n~G~~~a~n~g~~  451 (625)
T 2z86_A          373 RVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKNKGIGSASNTAVR  451 (625)
T ss_dssp             SSCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-ECCCCHHHHHHHHHH
T ss_pred             cCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CCCCCHHHHHHHHHH
Confidence            345799999999999999999998655433  28999999999999999999855322255544 233455567787776


Q ss_pred             HhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEeeeec
Q 008286          366 HAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRCLDFG  419 (571)
Q Consensus       366 r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w~~Fg  419 (571)
                      .+  ..+||+++|.|.++.+.       .-..+.+.+.+.++++.+......+.
T Consensus       452 ~a--~g~~i~~ld~D~~~~~~-------~l~~~~~~~~~~~~~~~v~~~~~~~~  496 (625)
T 2z86_A          452 LC--RGFYIGQLDSDDFLEPD-------AVELCLDEFRKDLSLACVYTTNRNID  496 (625)
T ss_dssp             HC--CSSEEEECCTTCEECTT-------HHHHHHHHHHHCTTCSEEEEEEEEEC
T ss_pred             hc--CCCEEEEECCCcccChh-------HHHHHHHHHHhCCCeeEEEeeeEEEC
Confidence            54  67999999999998663       22333344444566776655444443

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=98.07  E-value=3.3e-05  Score=82.78  Aligned_cols=113  Identities=15%  Similarity=0.011  Sum_probs=80.6

Q ss_pred             CCceEEEEEEecchH-HHHHHHHHHhhhcCc----cEEEEEEcCCChh-HHHHHHhhcCC-CcEEEEEecCCchhHHHHH
Q 008286          288 PKSEICVCTMVYNVA-KFVKEWVIYHTKIGV----EKFILYDNGSEDD-LQNVVNELNGD-GYNVTTLLWIWPKTQEAGF  360 (571)
Q Consensus       288 ~k~~IcVctivkNEa-~~L~EwIeyH~~lGv----d~f~IYDn~StD~-t~eIL~~y~~~-G~~Vt~i~Wp~~~~Q~aa~  360 (571)
                      ....++|++.++||+ ..|.++|+.-..+-.    .+|+|+||+|+|+ +.++|+.|.+. +..|.++.-+...+...+.
T Consensus        27 ~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~~~a~  106 (472)
T 1xhb_A           27 NLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRAR  106 (472)
T ss_dssp             CCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHH
T ss_pred             CCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCChHHHH
Confidence            445799999999999 999999988655432    2899999999984 99999988543 2136666655555566677


Q ss_pred             HHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCcc
Q 008286          361 SHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIG  409 (571)
Q Consensus       361 ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~  409 (571)
                      |..+..+  ..+||+|+|.|-.+.+.       ....+.+.+++.+.+.
T Consensus       107 N~g~~~A--~gd~i~flD~D~~~~p~-------~L~~ll~~~~~~~~~~  146 (472)
T 1xhb_A          107 LKGAAVS--RGQVITFLDAHCECTAG-------WLEPLLARIKHDRRTV  146 (472)
T ss_dssp             HHHHHHC--CSSEEEEEESSEEECTT-------CHHHHHHHHHHCTTEE
T ss_pred             HHHHHhc--cCCeEEEECCCeEeCcc-------HHHHHHHHHHhCCCEE
Confidence            7776544  57999999999886653       2344545555445443

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*

Probab=98.02  E-value=3.3e-06  Score=89.64  Aligned_cols=92  Identities=16%  Similarity=0.104  Sum_probs=68.9

Q ss_pred             CceEEEEEEecchHHHHHHHHHHhhhc-----CccEEEEEEcCCChhHHHHHHhhcCCCcEEEEE-----ecCCchhHHH
Q 008286          289 KSEICVCTMVYNVAKFVKEWVIYHTKI-----GVEKFILYDNGSEDDLQNVVNELNGDGYNVTTL-----LWIWPKTQEA  358 (571)
Q Consensus       289 k~~IcVctivkNEa~~L~EwIeyH~~l-----Gvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i-----~Wp~~~~Q~a  358 (571)
                      ...++|++.++||++.|.++|+.-..+     ...+|+|+||+|+|+|.++++.+...   +...     ..+...+...
T Consensus        93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~---v~~~~~~~i~~~~n~G~g~  169 (387)
T 3f1y_A           93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAE---VYSENELMSGYGDAHGKGD  169 (387)
T ss_dssp             TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCE---EEEGGGTTGGGCSCCSHHH
T ss_pred             CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCch---hcccceeEecCCccCCHHH
Confidence            467899999999999999998876442     35699999999999999999998642   2211     1223445556


Q ss_pred             HHHHHHHHhcCCCcEEEEecCCce-eec
Q 008286          359 GFSHNAIHAKHSCKWMLYIDVDEF-VYS  385 (571)
Q Consensus       359 a~ndcl~r~~~~~dWVlfiDaDEf-L~p  385 (571)
                      ++|.++..  ...+||+++|+|.. +.|
T Consensus       170 A~n~G~~~--A~gd~i~~lDaD~~~~~p  195 (387)
T 3f1y_A          170 AMWRALSV--TRGDLVLYIDADTRDFRP  195 (387)
T ss_dssp             HHHHHTTT--CCSSEEEECCTTCSSCCT
T ss_pred             HHHHHHHh--cCCCEEEEEcCCCCcCCH
Confidence            67766643  36799999999999 565

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=97.98  E-value=4.3e-05  Score=86.32  Aligned_cols=114  Identities=16%  Similarity=0.085  Sum_probs=80.6

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHhhhc-----CccEEEEEEcCCChh-----HHHHHHhhcCCCcEEEEEecCCchhHH
Q 008286          288 PKSEICVCTMVYNVAKFVKEWVIYHTKI-----GVEKFILYDNGSEDD-----LQNVVNELNGDGYNVTTLLWIWPKTQE  357 (571)
Q Consensus       288 ~k~~IcVctivkNEa~~L~EwIeyH~~l-----Gvd~f~IYDn~StD~-----t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~  357 (571)
                      ....|+|++.++|++++|.++|+.-..+     ...+|+|+||+|+|+     +.++++.+..   .|+++.-+ +.+-.
T Consensus       178 ~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~---~I~vI~~~-N~G~a  253 (657)
T 4fix_A          178 GTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGS---RLSIHDQP-NLGGS  253 (657)
T ss_dssp             SCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGG---GEEEEECC-CCHHH
T ss_pred             CCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCC---CEEEEECC-CCCHH
Confidence            4567999999999999999999985443     345899999999873     4555555433   36666555 55566


Q ss_pred             HHHHHHHHHhcC--CCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEE
Q 008286          358 AGFSHNAIHAKH--SCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVS  412 (571)
Q Consensus       358 aa~ndcl~r~~~--~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~  412 (571)
                      .++|..+..+..  .++||+|+|.|-.+.+.       .-..+.+.++..++++.+.
T Consensus       254 ~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd-------~L~~ll~~l~~~~~~~~vg  303 (657)
T 4fix_A          254 GGYSRVMYEALKNTDCQQILFMDDDIRLEPD-------SILRVLAMHRFAKAPMLVG  303 (657)
T ss_dssp             HHHHHHHHHHHHHCCCSEEEEECSSEEECTH-------HHHHHHHHHHHBSSCCEEE
T ss_pred             HHHHHHHHHHHhcCCCCEEEEECCCCccChh-------HHHHHHHHHHhCCCcEEEE
Confidence            778888776654  68999999999998863       2334444455555555544

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=97.90  E-value=6.4e-05  Score=83.22  Aligned_cols=110  Identities=13%  Similarity=-0.021  Sum_probs=80.1

Q ss_pred             CceEEEEEEecchH-HHHHHHHHHhhhcCc-c---EEEEEEcCCChhH-HHHHHhhcCCCcEEEEEecCCchhHHHHHHH
Q 008286          289 KSEICVCTMVYNVA-KFVKEWVIYHTKIGV-E---KFILYDNGSEDDL-QNVVNELNGDGYNVTTLLWIWPKTQEAGFSH  362 (571)
Q Consensus       289 k~~IcVctivkNEa-~~L~EwIeyH~~lGv-d---~f~IYDn~StD~t-~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~nd  362 (571)
                      ...++|++.++||+ ..|.++|+.-..+-. +   +|+|+||+|+|++ .++|+.|.+..-.|.++.-+...+-..+.|.
T Consensus       111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~~~A~N~  190 (570)
T 2d7i_A          111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTRML  190 (570)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCHHHHHHH
T ss_pred             CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCHHHHHHH
Confidence            35789999999998 999999988655432 2   8999999999999 9999998654323666665555555666777


Q ss_pred             HHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCC
Q 008286          363 NAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHS  407 (571)
Q Consensus       363 cl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~  407 (571)
                      .+..+  ..+||+|+|+|-.+.+. +     + ..+.+.+.+.+.
T Consensus       191 G~~~A--~gd~i~fLD~D~~~~p~-~-----L-~~ll~~l~~~~~  226 (570)
T 2d7i_A          191 GASVA--TGDVITFLDSHCEANVN-W-----L-PPLLDRIARNRK  226 (570)
T ss_dssp             HHHHC--CSSEEEECCSSEEECTT-C-----S-HHHHHHHHHCTT
T ss_pred             HHHhc--CCCEEEEEcCCcccccc-H-----H-HHHHHHHHhCCC
Confidence            76654  67999999999999653 3     3 344454554443

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=97.88  E-value=0.0001  Score=81.75  Aligned_cols=112  Identities=13%  Similarity=0.072  Sum_probs=79.3

Q ss_pred             ceEEEEEEecchHHHHHHHHHHhhhcC---ccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCch-hHHHHHHHHHH
Q 008286          290 SEICVCTMVYNVAKFVKEWVIYHTKIG---VEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPK-TQEAGFSHNAI  365 (571)
Q Consensus       290 ~~IcVctivkNEa~~L~EwIeyH~~lG---vd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~-~Q~aa~ndcl~  365 (571)
                      ..|+|++.++|++..|.++|+.-..+-   --+++|+||+|+|++.++++.+.+..- +.++.-+..+ +...+.|.++.
T Consensus        93 p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~-i~~i~~~~~~~g~~~a~N~g~~  171 (625)
T 2z86_A           93 DGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLN-IKYVRQKDYGYQLCAVRNLGLR  171 (625)
T ss_dssp             CCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSC-EEEEEECCCSCCHHHHHHHHHH
T ss_pred             CcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCC-eEEEEeCCCCcchhHHHHHHHH
Confidence            578999999999999999999866552   358999999999999999999965432 4444434332 24455676665


Q ss_pred             HhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEE
Q 008286          366 HAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQV  411 (571)
Q Consensus       366 r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i  411 (571)
                      .+  ..+||+++|.|..+.+.       .-..+.+.+.+.+..+.+
T Consensus       172 ~a--~g~~v~~lD~D~~~~~~-------~l~~~~~~~~~~~~~~~~  208 (625)
T 2z86_A          172 AA--KYNYVAILDCDMAPNPL-------WVQSYMELLAVDDNVALI  208 (625)
T ss_dssp             HC--CSSEEEEECTTEEECTT-------HHHHHHHHHHHCTTEEEE
T ss_pred             hC--CcCEEEEECCCCCCCHH-------HHHHHHHHHhcCCceEEE
Confidence            44  77999999999999653       233444445444544443

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=97.65  E-value=0.00047  Score=74.60  Aligned_cols=93  Identities=17%  Similarity=0.072  Sum_probs=68.6

Q ss_pred             CCceEEEEEEecchHH-HHHHHHHHhhhcCc-c---EEEEEEcCCChhHHHH-HHhhcCCCcEEEEEecCCchhHHHHHH
Q 008286          288 PKSEICVCTMVYNVAK-FVKEWVIYHTKIGV-E---KFILYDNGSEDDLQNV-VNELNGDGYNVTTLLWIWPKTQEAGFS  361 (571)
Q Consensus       288 ~k~~IcVctivkNEa~-~L~EwIeyH~~lGv-d---~f~IYDn~StD~t~eI-L~~y~~~G~~Vt~i~Wp~~~~Q~aa~n  361 (571)
                      ....++|++.++||+. .|.++|+.-..+-. +   +|+|+|++|+|++.+. ++.+.    .|.++.-+...+...+.|
T Consensus        64 ~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~----~v~vi~~~~n~G~~~A~N  139 (501)
T 2ffu_A           64 DLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIE----KVRVLRNDRREGLMRSRV  139 (501)
T ss_dssp             SCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGBT----TEEEEECSSCCHHHHHHH
T ss_pred             CCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcCC----CEEEEECCCCcCHHHHHH
Confidence            3456999999999987 99999988655422 2   8999999999998543 32221    266666566666777778


Q ss_pred             HHHHHhcCCCcEEEEecCCceeecC
Q 008286          362 HNAIHAKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       362 dcl~r~~~~~dWVlfiDaDEfL~p~  386 (571)
                      ..+..+  ..+||+|+|+|-.+.+.
T Consensus       140 ~G~~~A--~gd~i~flD~D~~~~p~  162 (501)
T 2ffu_A          140 RGADAA--QAKVLTFLDSHCECNEH  162 (501)
T ss_dssp             HHHHHC--CSSEEEECCSSEEECTT
T ss_pred             HHHHhc--CCCEEEEECCCcccCcc
Confidence            777654  67999999999988653

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=97.60  E-value=8.8e-06  Score=92.49  Aligned_cols=94  Identities=13%  Similarity=0.217  Sum_probs=0.0

Q ss_pred             eEEEEEEecchHHHHHHHHHHhhhcCcc--EEEEEEcCCChhHHHHHHhhcCC-CcEEEEEecCCchhHHHHHHHHHHHh
Q 008286          291 EICVCTMVYNVAKFVKEWVIYHTKIGVE--KFILYDNGSEDDLQNVVNELNGD-GYNVTTLLWIWPKTQEAGFSHNAIHA  367 (571)
Q Consensus       291 ~IcVctivkNEa~~L~EwIeyH~~lGvd--~f~IYDn~StD~t~eIL~~y~~~-G~~Vt~i~Wp~~~~Q~aa~ndcl~r~  367 (571)
                      .|+|++.++|++++|.++|+.-..+-..  +|+|+|++|+|+|.++++.+.+. +..|.++.-+...+...+.|.++..+
T Consensus         3 ~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A   82 (729)
T 3l7i_A            3 KLTIIVTYYNAEEYITGCLESIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEV   82 (729)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhc
Confidence            5788888999999999999986555332  79999999999999999999754 22355444333344455667666544


Q ss_pred             cCCCcEEEEecCCceeecC
Q 008286          368 KHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       368 ~~~~dWVlfiDaDEfL~p~  386 (571)
                        ..+||+|+|.|..+.|.
T Consensus        83 --~gdyI~flD~Dd~~~p~   99 (729)
T 3l7i_A           83 --ETPYFMFLDADDELASY   99 (729)
T ss_dssp             -------------------
T ss_pred             --cCCEEEEECCCCCCChh
Confidence              67999999999999763

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=97.04  E-value=0.0022  Score=73.85  Aligned_cols=116  Identities=10%  Similarity=0.003  Sum_probs=74.5

Q ss_pred             CceEEEEEEecchHHHH-HHHHHHhhhcCcc----EEEEEEcCCChhHH---------------HHHHhhcC-CCcEEEE
Q 008286          289 KSEICVCTMVYNVAKFV-KEWVIYHTKIGVE----KFILYDNGSEDDLQ---------------NVVNELNG-DGYNVTT  347 (571)
Q Consensus       289 k~~IcVctivkNEa~~L-~EwIeyH~~lGvd----~f~IYDn~StD~t~---------------eIL~~y~~-~G~~Vt~  347 (571)
                      ...++|++.++||+..+ .++|+.-..+-..    +|+|.|++|+|++.               +.++.+.+ .|.  .+
T Consensus       139 ~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v--~~  216 (802)
T 4hg6_A          139 LPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGV--VY  216 (802)
T ss_dssp             CCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTC--EE
T ss_pred             CCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCc--EE
Confidence            34788888899998765 8899986555432    69999999999983               33444422 233  22


Q ss_pred             EecCC-chhHHHHHHHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEEe
Q 008286          348 LLWIW-PKTQEAGFSHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIRC  415 (571)
Q Consensus       348 i~Wp~-~~~Q~aa~ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~w  415 (571)
                      +.-+. ..+...+.|.++..+  +.|||+++|+|-.+.+.       .-..+.+.+.+.|+++.+..+.
T Consensus       217 i~~~~~~~GKa~alN~gl~~a--~gd~Il~lDaD~~~~pd-------~L~~lv~~~~~dp~v~~V~~~~  276 (802)
T 4hg6_A          217 STRERNEHAKAGNMSAALERL--KGELVVVFDADHVPSRD-------FLARTVGYFVEDPDLFLVQTPH  276 (802)
T ss_dssp             EECSSCCSHHHHHHHHHHHHC--CCSEEEECCTTEEECTT-------HHHHHHHHHHHSSSCCEEECCC
T ss_pred             EEecCCCCcchHHHHHHHHhc--CCCEEEEECCCCCcChH-------HHHHHHHHHhcCCCeEEEeccE
Confidence            22222 234445677776544  77999999999988653       2233334444456777776543

>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*

Probab=96.60  E-value=0.0077  Score=63.17  Aligned_cols=121  Identities=12%  Similarity=0.082  Sum_probs=72.0

Q ss_pred             CceEEEEEEecchHHHHHHHHHHhhhcCccEEEEEEcCCChhH---HHHHHhhcC-CCcEEEEEecCCchhHHHHHHH--
Q 008286          289 KSEICVCTMVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDL---QNVVNELNG-DGYNVTTLLWIWPKTQEAGFSH--  362 (571)
Q Consensus       289 k~~IcVctivkNEa~~L~EwIeyH~~lGvd~f~IYDn~StD~t---~eIL~~y~~-~G~~Vt~i~Wp~~~~Q~aa~nd--  362 (571)
                      ...++|++-++||...+.+-|.-.....+ .|+|+||+|+|.+   .++++.|.+ ..-.+.++. ..+.+-..+++.  
T Consensus        52 ~~klSIVVPvYNEe~~lLesVl~qi~~d~-eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viH-Qkn~gls~Ar~~~G  129 (391)
T 2wvl_A           52 LEQTAIVVPTRNERLKLLEGVLSGIPHEA-LILVASNSSPDRFQMERDLLEEFAHLTERPALIFH-QKDPALAEALRAGG  129 (391)
T ss_dssp             HTTEEEEEEESSCCHHHHHHHHHTSCTTS-EEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEE-TTCHHHHHHHHHTT
T ss_pred             HhceEEEEeccCcHHHHHHHHHhcCCCCc-eEEEEECCCCCChHhHHHHHHHHHhhcccceEEEe-ccChHHHHHHHhcC
Confidence            35678888899999887665543211122 7999999999999   678889964 121244433 122222222321  


Q ss_pred             ---------------------HHHHh-cCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhc----cCCccEEEEEee
Q 008286          363 ---------------------NAIHA-KHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQ----LHSIGQVSIRCL  416 (571)
Q Consensus       363 ---------------------cl~r~-~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~----~p~i~~i~~~w~  416 (571)
                                           -+..+ ....+||.|+|+|-++...       ..+.+..+-+.    ....+.+++.|+
T Consensus       130 ~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~-------v~Eyvk~yaag~~~a~s~~~MVRI~wR  202 (391)
T 2wvl_A          130 YPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGA-------VWEYVRAYAAGFLMAKTPFAMVRILWR  202 (391)
T ss_dssp             CCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHH-------HHHHHHHHHHHHHHCCSSEEEEEEECC
T ss_pred             cchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccC-------HHHHHHHHHHHhcccCCCcceEEEecc
Confidence                                 11111 1378999999999999542       12333333222    135778889998


Q ss_pred             ee
Q 008286          417 DF  418 (571)
Q Consensus       417 ~F  418 (571)
                      .-
T Consensus       203 ~k  204 (391)
T 2wvl_A          203 YK  204 (391)
T ss_dssp             CC
T ss_pred             cC
Confidence            64

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*

Probab=96.53  E-value=0.005  Score=65.53  Aligned_cols=65  Identities=14%  Similarity=0.083  Sum_probs=42.6

Q ss_pred             cEEEEEEcCCChhHHHHHHh----hc-CCCcEEEEEecC--C--chhHHHHHHHHHHHh--cCCCcEEEEecCCce
Q 008286          318 EKFILYDNGSEDDLQNVVNE----LN-GDGYNVTTLLWI--W--PKTQEAGFSHNAIHA--KHSCKWMLYIDVDEF  382 (571)
Q Consensus       318 d~f~IYDn~StD~t~eIL~~----y~-~~G~~Vt~i~Wp--~--~~~Q~aa~ndcl~r~--~~~~dWVlfiDaDEf  382 (571)
                      -+|+|+|+||+|+|.++++.    +. +.|..|....-.  +  ..++..+++..+..+  ..+.|||+++|+|=-
T Consensus        29 ~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq  104 (397)
T 2bo4_A           29 VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADIT  104 (397)
T ss_dssp             CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCS
T ss_pred             eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCC
Confidence            37999999999999999993    32 234333322212  2  345566666665221  357899999999954

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*

Probab=96.05  E-value=0.014  Score=57.12  Aligned_cols=91  Identities=10%  Similarity=-0.024  Sum_probs=58.5

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHhh----hcCccEEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHHH
Q 008286          288 PKSEICVCTMVYNVAKFVKEWVIYHT----KIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSHN  363 (571)
Q Consensus       288 ~k~~IcVctivkNEa~~L~EwIeyH~----~lGvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~ndc  363 (571)
                      ..+.++|++ ++|+.+.|.++|+...    .+..-+++|+||+|+|.          .|+             ..+.|..
T Consensus        14 ~~~~iSII~-~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~----------~g~-------------a~a~N~G   69 (249)
T 2nxv_A           14 STLMFSVCS-LVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ----------FHG-------------FSWHKQM   69 (249)
T ss_dssp             CCCSEEEEE-EESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS----------CCT-------------TTHHHHH
T ss_pred             CcceEEEEE-eeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc----------ccH-------------HHHHHHH
Confidence            345677764 5899999999999432    12225799999999872          121             1233444


Q ss_pred             HHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhc----cCCccEE
Q 008286          364 AIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQ----LHSIGQV  411 (571)
Q Consensus       364 l~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~----~p~i~~i  411 (571)
                      +.  ....+|++|+|.|-++ ++++      -..|.+.+++    .|+++.+
T Consensus        70 i~--~A~g~yl~fln~D~~~-~~~~------l~~l~~~~~~~~~~~~~vg~v  112 (249)
T 2nxv_A           70 LP--RCKGRYVIFCHEDVEL-VDRG------YDDLVAAIEALEEADPKWLVA  112 (249)
T ss_dssp             GG--GCCSSEEEEEETTEEC-SSCC------HHHHHHHHHHHHHHCTTEEEE
T ss_pred             HH--hcCCCEEEEECCCccc-CccH------HHHHHHHHHhcccCCCCeeEE
Confidence            43  3367999999999998 4433      3455555554    2666554

>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*

Probab=94.43  E-value=0.083  Score=56.09  Aligned_cols=87  Identities=9%  Similarity=0.111  Sum_probs=54.5

Q ss_pred             ceEEEEEEecchHHHHH-HHHHHhhhcCccEEEEEEcCCChhH------HHHHHhhcC---CCcEEEEEecCCc------
Q 008286          290 SEICVCTMVYNVAKFVK-EWVIYHTKIGVEKFILYDNGSEDDL------QNVVNELNG---DGYNVTTLLWIWP------  353 (571)
Q Consensus       290 ~~IcVctivkNEa~~L~-EwIeyH~~lGvd~f~IYDn~StD~t------~eIL~~y~~---~G~~Vt~i~Wp~~------  353 (571)
                      ..++|++-++||+..+. +-+.-  .-...+|+|.|++|+|++      .++++.+.+   .+.   .+-|...      
T Consensus        51 ~~iSVVIP~yNEE~~lI~~vL~~--i~~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~~---~Vl~~~~p~v~~~  125 (394)
T 2zu9_A           51 GKMAVIVPMKNEKLHLVDGVLKA--IPHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSKI---IMIHQKDPGLAKA  125 (394)
T ss_dssp             TTEEEEEEESSCCHHHHHHHHHH--SCTTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCCE---EEEETTCHHHHHH
T ss_pred             CCEEEEEecCcccHHHHHHHHHc--CCCCcEEEEEECcCcccccchhhHHHHHHHHhhccccce---EEEecCCcchhHH
Confidence            36888888999986653 33331  112357999999996666      677776522   333   2233322      


Q ss_pred             -----------------hhHHHHHHHHHHHh-cCCCcEEEEecCCc
Q 008286          354 -----------------KTQEAGFSHNAIHA-KHSCKWMLYIDVDE  381 (571)
Q Consensus       354 -----------------~~Q~aa~ndcl~r~-~~~~dWVlfiDaDE  381 (571)
                                       .++..+.--++..+ ....+||+++|+|=
T Consensus       126 ~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl  171 (394)
T 2zu9_A          126 FKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN  171 (394)
T ss_dssp             HHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB
T ss_pred             hhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC
Confidence                             24444455555544 33789999999999

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...

Probab=92.52  E-value=0.35  Score=48.81  Aligned_cols=76  Identities=11%  Similarity=0.205  Sum_probs=50.7

Q ss_pred             CCceEEEEEEecchHHHHHHHHHHhh----hcCcc-EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCCchhHHHHHHH
Q 008286          288 PKSEICVCTMVYNVAKFVKEWVIYHT----KIGVE-KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIWPKTQEAGFSH  362 (571)
Q Consensus       288 ~k~~IcVctivkNEa~~L~EwIeyH~----~lGvd-~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~~~~Q~aa~nd  362 (571)
                      ....|+|++.++|+++.|.++|++..    ....+ +|+|.|+. +|+           ++         .  ...+.|.
T Consensus        63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~EIiVVdds-~d~-----------~f---------~--~a~a~N~  119 (287)
T 2fy7_A           63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQA-GDT-----------IF---------N--RAKLLNV  119 (287)
T ss_dssp             CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEC-SSS-----------CC---------C--HHHHHHH
T ss_pred             cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEeC-CCC-----------cc---------c--hhhhhhh
Confidence            45689999999999999999999865    22332 67888873 331           11         0  1122333


Q ss_pred             HHHH--hcCCCcEEEEecCCceeecC
Q 008286          363 NAIH--AKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       363 cl~r--~~~~~dWVlfiDaDEfL~p~  386 (571)
                      .+..  .....+|++|+|+|-.+.+.
T Consensus       120 G~~~al~~A~gd~i~flD~D~i~~~d  145 (287)
T 2fy7_A          120 GFQEALKDYDYTCFVFSDVDLIPMND  145 (287)
T ss_dssp             HHHHHHHHSCCCEEEEECTTEEESBT
T ss_pred             HHHHHHHhCCCCEEEEECCCcccCCC
Confidence            3311  23578999999999988875

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=80.55  E-value=5.2  Score=34.99  Aligned_cols=52  Identities=25%  Similarity=0.524  Sum_probs=43.1

Q ss_pred             EecchHHHHHHHHHHhhhcCccEEEEEEcCCChhHHHHHHhhcCCCcEEEEE
Q 008286          297 MVYNVAKFVKEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNGDGYNVTTL  348 (571)
Q Consensus       297 ivkNEa~~L~EwIeyH~~lGvd~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i  348 (571)
                      .+-+.-.||..||+--+.-|++-|++|.|..+|.-.+.-+.+...|..|..+
T Consensus        84 vttddkewikdfieeakergvevfvvynnkdddrrkeaqqefrsdgvdvrtv  135 (162)
T 2l82_A           84 VTTDDKEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRTV  135 (162)
T ss_dssp             EECCCHHHHHHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHCCSSCEEEEE
T ss_pred             EecCcHHHHHHHHHHHHhcCcEEEEEecCCCchhHHHHHHHhhhcCceeeec
Confidence            3457778999999998889999999999988888888888898888765443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	571
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	98.55
d1omza_	265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	98.28
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	97.94
d2bo4a1	381	Mannosylglycerate synthase, MGS {Rhodothermus mari	91.46

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=98.55  E-value=4.8e-07  Score=85.89  Aligned_cols=114  Identities=12%  Similarity=0.103  Sum_probs=82.3

Q ss_pred             eEEEEEEecchHHHHHHHHHHhhhcCcc--EEEEEEcCCChhHHHHHHhhcCCCcEEEEEecCC--------chhHHHHH
Q 008286          291 EICVCTMVYNVAKFVKEWVIYHTKIGVE--KFILYDNGSEDDLQNVVNELNGDGYNVTTLLWIW--------PKTQEAGF  360 (571)
Q Consensus       291 ~IcVctivkNEa~~L~EwIeyH~~lGvd--~f~IYDn~StD~t~eIL~~y~~~G~~Vt~i~Wp~--------~~~Q~aa~  360 (571)
                      .|+|++.++|++++|.++|+.-..+=.+  +++|+|++|+|+|.++|+.+.+..- +..+..+.        ..+...+.
T Consensus         2 ~vSiiip~yN~~~~l~~~l~Si~~Qt~~~~eiivvdd~S~d~t~~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~g~~~a~   80 (255)
T d1qg8a_           2 KVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNR-VRFYQSDISGVKERTEKTRYAALI   80 (255)
T ss_dssp             CEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGGSTT-EEEEECCCCSHHHHHSSCHHHHHH
T ss_pred             EEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHhhhhcc-cccccccccccccccccchhcccc
Confidence            5788888999999999999985544333  8999999999999999999976533 55555432        22334566


Q ss_pred             HHHHHHhcCCCcEEEEecCCceeecCCCCCCCCcHHHHHHhhhccCCccEEEEE
Q 008286          361 SHNAIHAKHSCKWMLYIDVDEFVYSPSWHDSGPSKHLLKALIPQLHSIGQVSIR  414 (571)
Q Consensus       361 ndcl~r~~~~~dWVlfiDaDEfL~p~~~~~~~~~~~~L~dlL~~~p~i~~i~~~  414 (571)
                      |.++..+  .++|++++|+|.++.|.       .-..+.+.+.+.++++.+...
T Consensus        81 N~gi~~a--~g~~i~~lD~Dd~~~p~-------~l~~~~~~~~~~~~~~~v~~~  125 (255)
T d1qg8a_          81 NQAIEMA--EGEYITYATDDNIYMPD-------RLLKMVRELDTHPEKAVIYSA  125 (255)
T ss_dssp             HHHHHHC--CCSEEEEEETTEEECTT-------HHHHHHHHHHHCTTCCEEEEE
T ss_pred             ccccccc--ccccccccccccccccc-------hHHHHHHHHHhCCCCCeEeec
Confidence            7776554  67999999999999863       234455555556777666433

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.28  E-value=2.3e-07  Score=84.70  Aligned_cols=91  Identities=10%  Similarity=0.043  Sum_probs=60.6

Q ss_pred             eEEEEEEecchHHHHHHHHHHhhhcC-ccEEEEEEcCCChhHHHHHHh-hcCCCcE-EEEEecCCchhHHHHHHHHHHHh
Q 008286          291 EICVCTMVYNVAKFVKEWVIYHTKIG-VEKFILYDNGSEDDLQNVVNE-LNGDGYN-VTTLLWIWPKTQEAGFSHNAIHA  367 (571)
Q Consensus       291 ~IcVctivkNEa~~L~EwIeyH~~lG-vd~f~IYDn~StD~t~eIL~~-y~~~G~~-Vt~i~Wp~~~~Q~aa~ndcl~r~  367 (571)
                      +++|++.++|+++.|.++|+....+. .++++|+||+|+|++.+++.. +.+.... +....+.   ++..+.|.++  .
T Consensus         4 ~~tvii~tyn~~~~l~~~l~sl~~q~~~~~~iiV~d~~sd~~~~~i~~~~~~~~~~~~~~~~~~---g~~~a~n~~~--~   78 (265)
T d1omza_           4 SFTLIMQTYNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTA---NKMRNRLQVF--P   78 (265)
T ss_dssp             CEEEEEEESSCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSS---CCGGGGGSCC--T
T ss_pred             cEEEEEEcCCCHHHHHHHHHHHHcCCCcCeEEEEECCCCCccHHHHHHHhcccceEEEEecCCC---CchhhhhhhH--H
Confidence            46777778999999999999977664 467888888877666555544 4443321 2222222   3333345444  3


Q ss_pred             cCCCcEEEEecCCceeecC
Q 008286          368 KHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       368 ~~~~dWVlfiDaDEfL~p~  386 (571)
                      ....+||+++|+|+++.+.
T Consensus        79 ~a~ge~i~~lD~D~~~~~~   97 (265)
T d1omza_          79 EVETNAVLMVDDDTLISAQ   97 (265)
T ss_dssp             TCCSSEEEEECTTEEECHH
T ss_pred             hCCcCEEEEeCcccCCCHH
Confidence            3477999999999998763

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.94  E-value=4.1e-05  Score=75.18  Aligned_cols=96  Identities=14%  Similarity=0.022  Sum_probs=68.9

Q ss_pred             CceEEEEEEecchH-HHHHHHHHHhhhcC---c-cEEEEEEcCCChhHH-HHHHhhcCCC-cEEEEEecCCchhHHHHHH
Q 008286          289 KSEICVCTMVYNVA-KFVKEWVIYHTKIG---V-EKFILYDNGSEDDLQ-NVVNELNGDG-YNVTTLLWIWPKTQEAGFS  361 (571)
Q Consensus       289 k~~IcVctivkNEa-~~L~EwIeyH~~lG---v-d~f~IYDn~StD~t~-eIL~~y~~~G-~~Vt~i~Wp~~~~Q~aa~n  361 (571)
                      ...++|++.++||+ ..|.++|+.-..+=   . .+|+|+||+|+|++. ++++.+.+.. ..|.++.-+...+...+.|
T Consensus        21 ~P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n~G~~~a~N  100 (328)
T d1xhba2          21 LPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARL  100 (328)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHHH
T ss_pred             CCCEEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEecccccchHHHH
Confidence            35689999999986 67989998754432   2 389999999998864 6677664432 2366665555555556677


Q ss_pred             HHHHHhcCCCcEEEEecCCceeecC
Q 008286          362 HNAIHAKHSCKWMLYIDVDEFVYSP  386 (571)
Q Consensus       362 dcl~r~~~~~dWVlfiDaDEfL~p~  386 (571)
                      ..+..  ...+||+|+|.|-.+.+.
T Consensus       101 ~Gi~~--a~gd~i~flD~D~~~~p~  123 (328)
T d1xhba2         101 KGAAV--SRGQVITFLDAHCECTAG  123 (328)
T ss_dssp             HHHHH--CCSSEEEEEESSEEECTT
T ss_pred             HHHHh--hhcceeeecCcccccChh
Confidence            77654  478999999999988653

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: MGS-like
domain: Mannosylglycerate synthase, MGS
species: Rhodothermus marinus [TaxId: 29549]

Probab=91.46  E-value=0.31  Score=48.95  Aligned_cols=86  Identities=12%  Similarity=0.059  Sum_probs=48.3

Q ss_pred             EEEEecchHHH-H---HHHHHHhhhcCccEEEEEEcCCChhHHHHHHhhcC----CCcEEEEEecC----CchhHHHHHH
Q 008286          294 VCTMVYNVAKF-V---KEWVIYHTKIGVEKFILYDNGSEDDLQNVVNELNG----DGYNVTTLLWI----WPKTQEAGFS  361 (571)
Q Consensus       294 VctivkNEa~~-L---~EwIeyH~~lGvd~f~IYDn~StD~t~eIL~~y~~----~G~~Vt~i~Wp----~~~~Q~aa~n  361 (571)
                      ||+-++||+.. |   .+.++.|-  .++.|+|.|++|+|.+.++.+.+.+    .+..+......    ...+...+..
T Consensus         3 VVIP~~NEe~~il~~~v~~~a~~P--~~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GKG~g~~   80 (381)
T d2bo4a1           3 VVFPFKHEHPEVLLHNVRVAAAHP--RVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMN   80 (381)
T ss_dssp             EEEECCSSCHHHHHHHHHHHHHST--TCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHH
T ss_pred             EEEEcCCCcHHHHHHHHHHHHhCC--CeeEEEEEcCCCCCcHHHHHHHhhhhhccccccchhhhhcccccccCCCcHHHH
Confidence            44558999753 3   23344332  4688888888888888777665432    12223222111    1112223333


Q ss_pred             HHHHH--hcCCCcEEEEecCCc
Q 008286          362 HNAIH--AKHSCKWMLYIDVDE  381 (571)
Q Consensus       362 dcl~r--~~~~~dWVlfiDaDE  381 (571)
                      .|+..  .....+.++|+|+|=
T Consensus        81 ~A~~~g~~~a~gd~lvflDADl  102 (381)
T d2bo4a1          81 TALRYFLEETQWERIHFYDADI  102 (381)
T ss_dssp             HHHHHHHHHCCCSEEEECCTTC
T ss_pred             HHHHHHHHhCCCCEEEEEcCCc
Confidence            34432  346889999999993