Citrus Sinensis ID: 008289

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-
MASIVAATPWSRIRTITKLELAPPIFLQSSVYYCKRRRFSVAASLSTNTNKVDGQVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQLPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVTLDERFKMLRQVDWEALKKDQPALESAAATAN
ccccccccccccEEEccccccccccccccccHHHHcccccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccEEEEEcccccEEEEcEEEEEEEEEEccccccEEEEccccccccccccccccccccccEEEccccccccHHHHHHHHHHccccccccEEccccccccccccccccccccHHHHHHccccHHHHHHHHHHHccccccccccccHHHHHHHccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccHHHHHHHHccHHHHHHHHHHHHccccHHHHccccHHHHHHHHHHHHHHHcccccccccHHHHHHccccccccHHHHHHHHcHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHcccc
ccHHHcccccHEEEEcccccccccHHccccHHHHHHHHHHHHHHccccccccccccEEEEccccccccEHHHHHHHHHHHHHHHHcccEEEEcEcccccccccccHHHHHHHHHHHccccccEEcccEccccccEHHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHccccccHHHHccHHHHHHHHHcccccEEEEccccccEEEEEEcccEEEEEEHHHccccEEEcccccEcHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHcccccEEEEEcccEcccccEccccccccEHHHHHHccccHHHHHHHHHcccEccccccccccHHHHHHHccHHHEcccccEccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccEEcEEEEEEccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccccccccccccc
masivaatpwsrirtitklelappiflqssvyyckRRRFSVAAslstntnkvdgqvrvrfapsptgnlhvggARTALFNYLFARSKGGKFVLRIEdtdlerstkESEEAVLQDLSwlgldwdegpgvggdygpyrqsernSLYKQYADKLLEsghvyrcfcsNEELEKMKEIAklkqlppvytgkwatatDAEVQKELergtpytyrfrvpkggslkisdlIRGEVSWNLDTLGDFVImrsngqpvynfcvtvddATMAISHVIRAEEHLPNTLRQALIYKALgfsmpyfaHVSLilapdrsklskrhgatsvgqfremgylPQAMVNYLALlgwgdgtenEFFTLKQLVEKFTIERvnksgaifdstklrwmngqhlraipsnELTKLIGERwkstgilteskgpfVDEAIQLLKDgidlvpdsdKALSNLlsyplrdtltssegksivEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRkgkslfmplRVLLTgklhgpdmgASILLIHKagthgivspraefvtLDERFKMLRQVDWEALKKDQPALESAAATAN
masivaatpwsrirtitklelappiFLQSSVYYCKRRRFSVaaslstntnkvdgqvrVRFApsptgnlhvgGARTALFNYLFARSKGGKFVLRIEDTdlerstkeseEAVLQDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKlkqlppvytgkwatatdaevqkelergtpytyrfrvpkggslkisdliRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIraeehlpnTLRQALIYKALGFSMPYFAHVSLILapdrsklskRHGATsvgqfremgyLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTiervnksgaifdstklrwmnGQHLRAIPSNELTKLIGERWKSTgilteskgpFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVTLDERFKMLRQVDWEalkkdqpalesaaatan
MASIVAATPWSRIRTITKLELAPPIFLQSSVYYCKRRRFSVAASLSTNTNKVDGQVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQLPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVTLDERFKMLRQVDWEALKKDQPALESAAATAN
***IVAATPWSRIRTITKLELAPPIFLQSSVYYCKRRRFSVAASLSTNTNKVDGQVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIED************AVLQDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQLPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLILAPDR*******GATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDT********IVEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVTLDERFKMLRQVDWEAL***************
*******TPWSRIRTITKLELAPPIFL*****************************RVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELE***************TGKWATA***********GTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVTLDERFKM************************
MASIVAATPWSRIRTITKLELAPPIFLQSSVYYCKRRRFSVAASLSTNTNKVDGQVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTD***********VLQDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQLPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVTLDERFKMLRQVDWEALKKD************
*A*IVAATPWSRIRTITKLELAPPIFLQSSVYYCKRRRFSVAASLSTNTNKVDGQVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQLPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVTLDERFKMLRQVDWEALKK*************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASIVAATPWSRIRTITKLELAPPIFLQSSVYYCKRRRFSVAASLSTNTNKVDGQVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQLPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVTLDERFKMLRQVDWEALKKDQPALESAAATAN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query571 2.2.26 [Sep-21-2011]
Q9FEA2570 Glutamate--tRNA ligase, c yes no 0.991 0.992 0.794 0.0
Q43794569 Glutamate--tRNA ligase, c N/A no 0.982 0.985 0.773 0.0
Q43768560 Glutamate--tRNA ligase, c N/A no 0.950 0.969 0.751 0.0
Q3A9N9480 Glutamate--tRNA ligase OS yes no 0.805 0.958 0.482 1e-120
A5D5L8480 Glutamate--tRNA ligase OS yes no 0.805 0.958 0.466 1e-117
A4J0Y7482 Glutamate--tRNA ligase OS yes no 0.816 0.966 0.453 1e-117
A4XHE0485 Glutamate--tRNA ligase 1 yes no 0.821 0.967 0.450 1e-116
B0TBU3496 Glutamate--tRNA ligase OS yes no 0.833 0.959 0.444 1e-116
B2A4B3488 Glutamate--tRNA ligase OS yes no 0.810 0.948 0.431 1e-111
Q0AYF8495 Glutamate--tRNA ligase 1 yes no 0.784 0.905 0.448 1e-110
>sp|Q9FEA2|SYE_ARATH Glutamate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At5g64050 PE=1 SV=1 Back     alignment and function desciption
 Score =  942 bits (2435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/575 (79%), Positives = 507/575 (88%), Gaps = 9/575 (1%)

Query: 1   MASIVAATPWSRIRTITKLELAPPIFL---QSSVYYCKRRRFSVAASLSTNTNKVDGQVR 57
           MAS+V  TPW R+R++ +L    P FL   QSS++YC RR F+V A  ST  N   G VR
Sbjct: 1   MASLVYGTPWLRVRSLPELA---PAFLRRRQSSLFYCSRRSFAVVAC-STPVNN-GGSVR 55

Query: 58  VRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWL 117
           VRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERST+ESE AVLQDLSWL
Sbjct: 56  VRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEAAVLQDLSWL 115

Query: 118 GLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQ 177
           GLDWDEGPGV GD+GPYRQSERN+LYKQYA+KLLESGHVYRCFCS+EEL KMKE AKLKQ
Sbjct: 116 GLDWDEGPGVSGDFGPYRQSERNALYKQYAEKLLESGHVYRCFCSSEELVKMKENAKLKQ 175

Query: 178 LPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFV 237
           LPPVYTGKWATA+DAE+++ELE+GTP+TYRFRVPK GSLKI+DLIRGEV WNLDTLGDFV
Sbjct: 176 LPPVYTGKWATASDAEIEQELEKGTPFTYRFRVPKEGSLKINDLIRGEVCWNLDTLGDFV 235

Query: 238 IMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLIL 297
           +MRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKAL F MP FAHVSLIL
Sbjct: 236 VMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALKFPMPQFAHVSLIL 295

Query: 298 APDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIER 357
           APDRSKLSKRHGATSVGQ+REMGYLPQ MVNYLALLGWGDGTENEFFTL+ LVEKF+IER
Sbjct: 296 APDRSKLSKRHGATSVGQYREMGYLPQGMVNYLALLGWGDGTENEFFTLEDLVEKFSIER 355

Query: 358 VNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKD 417
           VNKSGAIFDSTKLRWMNGQHLRA+P+ +LTKL+GERWKS GILTES+G FV+EA++LLKD
Sbjct: 356 VNKSGAIFDSTKLRWMNGQHLRALPNEKLTKLVGERWKSAGILTESEGSFVNEAVELLKD 415

Query: 418 GIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEG 477
           GI+LV DSDK L NLLSYPL  TL S E K  VED L EVAA L+AAYD GE+ +ALEEG
Sbjct: 416 GIELVTDSDKVLLNLLSYPLHATLASPEAKPAVEDKLHEVAASLIAAYDSGEIPSALEEG 475

Query: 478 HAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAE 537
              WQKWVK FGK+LKRKGKSLFMPLRVLLTGKLHGP+MG SI+LI+KAG+ GIV P+A 
Sbjct: 476 QGAWQKWVKAFGKSLKRKGKSLFMPLRVLLTGKLHGPEMGTSIVLIYKAGSPGIVVPQAG 535

Query: 538 FVTLDERFKMLRQVDWEALKKDQPA-LESAAATAN 571
           FV+++ERFK+LR++DWEAL KD+   LES A  + 
Sbjct: 536 FVSMEERFKILREIDWEALNKDESVPLESTATVST 570
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 7
>sp|Q43794|SYE_TOBAC Glutamate--tRNA ligase, chloroplastic/mitochondrial OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q43768|SYE_HORVU Glutamate--tRNA ligase, chloroplastic/mitochondrial OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description
>sp|Q3A9N9|SYE_CARHZ Glutamate--tRNA ligase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gltX PE=3 SV=1 Back     alignment and function description
>sp|A5D5L8|SYE_PELTS Glutamate--tRNA ligase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=gltX PE=3 SV=1 Back     alignment and function description
>sp|A4J0Y7|SYE_DESRM Glutamate--tRNA ligase OS=Desulfotomaculum reducens (strain MI-1) GN=gltX PE=3 SV=1 Back     alignment and function description
>sp|A4XHE0|SYE1_CALS8 Glutamate--tRNA ligase 1 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=gltX1 PE=3 SV=1 Back     alignment and function description
>sp|B0TBU3|SYE_HELMI Glutamate--tRNA ligase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=gltX PE=3 SV=1 Back     alignment and function description
>sp|B2A4B3|SYE_NATTJ Glutamate--tRNA ligase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=gltX PE=3 SV=1 Back     alignment and function description
>sp|Q0AYF8|SYE1_SYNWW Glutamate--tRNA ligase 1 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=gltX1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query571
225428342566 PREDICTED: glutamyl-tRNA synthetase, chl 0.991 1.0 0.826 0.0
255583454577 glutamyl-tRNA synthetase 1, 2, putative 0.996 0.986 0.804 0.0
224104805574 predicted protein [Populus trichocarpa] 0.985 0.980 0.805 0.0
297797409570 ATERS/ERS/OVA3 [Arabidopsis lyrata subsp 0.991 0.992 0.796 0.0
449454319573 PREDICTED: glutamate--tRNA ligase, chlor 0.985 0.982 0.797 0.0
15237594570 glutamyl-tRNA synthetase [Arabidopsis th 0.991 0.992 0.794 0.0
15809895570 AT5g64050/MHJ24_3 [Arabidopsis thaliana] 0.991 0.992 0.793 0.0
147806055555 hypothetical protein VITISV_039082 [Viti 0.964 0.992 0.811 0.0
356520709562 PREDICTED: glutamyl-tRNA synthetase, chl 0.973 0.989 0.801 0.0
356504472559 PREDICTED: glutamyl-tRNA synthetase, chl 0.970 0.991 0.801 0.0
>gi|225428342|ref|XP_002283154.1| PREDICTED: glutamyl-tRNA synthetase, chloroplastic/mitochondrial [Vitis vinifera] gi|297744457|emb|CBI37719.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  966 bits (2498), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/571 (82%), Positives = 515/571 (90%), Gaps = 5/571 (0%)

Query: 1   MASIVAATPWSRIRTITKLELAPPIFLQSSVYYCKRRRFSVAASLSTNTNKVDGQVRVRF 60
           MAS+V  +PW +IR I   E+APPI          RR FSV+ S      K++G+VRVRF
Sbjct: 1   MASLVG-SPWMKIRVIP--EVAPPI--LRRSSSLFRRSFSVSCSTEAPPKKLEGEVRVRF 55

Query: 61  APSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWLGLD 120
           APSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTK+SEEA+LQDLSWLGL 
Sbjct: 56  APSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKQSEEALLQDLSWLGLH 115

Query: 121 WDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQLPP 180
           WDEGPGVGGDYGPYRQSERNSLYKQYA+KLLESGHVY+CFCSNEELEKMKEIAKLKQLPP
Sbjct: 116 WDEGPGVGGDYGPYRQSERNSLYKQYAEKLLESGHVYQCFCSNEELEKMKEIAKLKQLPP 175

Query: 181 VYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFVIMR 240
           VYTGKWA+AT  EVQ+ELERGTPYTYRFRVPK GSLKI DLIRGEV WNLDTLGDFVIMR
Sbjct: 176 VYTGKWASATAEEVQEELERGTPYTYRFRVPKEGSLKIDDLIRGEVRWNLDTLGDFVIMR 235

Query: 241 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLILAPD 300
           SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQAL+YKALGF+MP FAHVSLILAPD
Sbjct: 236 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALLYKALGFAMPSFAHVSLILAPD 295

Query: 301 RSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNK 360
           RSKLSKRHGATSVGQF+EMG+LPQAMVNYLALLGWGDGTENEFFTLK LVEKF+I+RVNK
Sbjct: 296 RSKLSKRHGATSVGQFKEMGFLPQAMVNYLALLGWGDGTENEFFTLKHLVEKFSIDRVNK 355

Query: 361 SGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKDGID 420
            GAIFDSTKLRWMNGQHLR++PS ELTKLIGERWK+TGILT+S GPF++EA+ LLKDGID
Sbjct: 356 GGAIFDSTKLRWMNGQHLRSLPSEELTKLIGERWKNTGILTQSDGPFIEEAVALLKDGID 415

Query: 421 LVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEGHAG 480
           L+ DSDKALSNLLSYPL  TLTS EGK ++ED LSEV++ LLAAYD GELL ALEEG AG
Sbjct: 416 LITDSDKALSNLLSYPLYATLTSPEGKPVLEDKLSEVSSSLLAAYDSGELLQALEEGPAG 475

Query: 481 WQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVT 540
           WQKWVK FGK+LKRKGKSLFMPLRVLLTGKLHGPDMGAS+LL+H+AGT G+V+P+  FVT
Sbjct: 476 WQKWVKSFGKSLKRKGKSLFMPLRVLLTGKLHGPDMGASVLLLHRAGTCGVVAPQVGFVT 535

Query: 541 LDERFKMLRQVDWEALKKDQPALESAAATAN 571
           L++RFKMLR+V+WEAL KDQP LESAA   N
Sbjct: 536 LEDRFKMLREVEWEALNKDQPPLESAAPAIN 566

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255583454|ref|XP_002532486.1| glutamyl-tRNA synthetase 1, 2, putative [Ricinus communis] gi|223527811|gb|EEF29910.1| glutamyl-tRNA synthetase 1, 2, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224104805|ref|XP_002313571.1| predicted protein [Populus trichocarpa] gi|222849979|gb|EEE87526.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297797409|ref|XP_002866589.1| ATERS/ERS/OVA3 [Arabidopsis lyrata subsp. lyrata] gi|297312424|gb|EFH42848.1| ATERS/ERS/OVA3 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449454319|ref|XP_004144903.1| PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like [Cucumis sativus] gi|449473003|ref|XP_004153756.1| PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like [Cucumis sativus] gi|449517148|ref|XP_004165608.1| PREDICTED: glutamate--tRNA ligase, chloroplastic/mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15237594|ref|NP_201210.1| glutamyl-tRNA synthetase [Arabidopsis thaliana] gi|30316183|sp|Q9FEA2.1|SYE_ARATH RecName: Full=Glutamate--tRNA ligase, chloroplastic/mitochondrial; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; Flags: Precursor gi|11078546|gb|AAG29098.1|AF241841_1 Glu-tRNA synthetase [Arabidopsis thaliana] gi|10176953|dbj|BAB10273.1| glutamate-tRNA ligase [Arabidopsis thaliana] gi|332010451|gb|AED97834.1| glutamyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15809895|gb|AAL06875.1| AT5g64050/MHJ24_3 [Arabidopsis thaliana] gi|17064968|gb|AAL32638.1| glutamate-tRNA ligase [Arabidopsis thaliana] gi|21387183|gb|AAM47995.1| glutamate-tRNA ligase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|147806055|emb|CAN72214.1| hypothetical protein VITISV_039082 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356520709|ref|XP_003529003.1| PREDICTED: glutamyl-tRNA synthetase, chloroplastic/mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|356504472|ref|XP_003521020.1| PREDICTED: glutamyl-tRNA synthetase, chloroplastic/mitochondrial-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query571
TAIR|locus:2164381570 ERS "glutamate tRNA synthetase 0.989 0.991 0.799 9.6e-247
TIGR_CMR|CHY_2340480 CHY_2340 "glutamyl-tRNA synthe 0.805 0.958 0.480 5.2e-113
TIGR_CMR|BA_0086485 BA_0086 "glutamyl-tRNA synthet 0.807 0.950 0.405 4.3e-93
TIGR_CMR|GSU_1219466 GSU_1219 "glutamyl-tRNA synthe 0.761 0.933 0.441 3.1e-90
TIGR_CMR|DET_1365484 DET_1365 "glutamyl-tRNA synthe 0.782 0.923 0.429 4e-90
TIGR_CMR|VC_2214474 VC_2214 "glutamyl-tRNA synthet 0.609 0.734 0.441 6.7e-87
TIGR_CMR|CBU_1488465 CBU_1488 "glutamyl-tRNA synthe 0.595 0.731 0.434 4e-83
GENEDB_PFALCIPARUM|MAL13P1.281574 MAL13P1.281 "glutamate--tRNA l 0.882 0.878 0.344 1e-82
UNIPROTKB|Q8IDD3574 MAL13P1.281 "Glutamate--tRNA l 0.882 0.878 0.344 1e-82
UNIPROTKB|P04805471 gltX "glutamyl-tRNA synthetase 0.809 0.980 0.380 2.2e-80
TAIR|locus:2164381 ERS "glutamate tRNA synthetase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2377 (841.8 bits), Expect = 9.6e-247, P = 9.6e-247
 Identities = 459/574 (79%), Positives = 508/574 (88%)

Query:     1 MASIVAATPWSRIRTITKLELAPPIFL---QSSVYYCKRRRFSVAASLSTNTNKVDGQVR 57
             MAS+V  TPW R+R++   ELAP  FL   QSS++YC RR F+V A  ST  N   G VR
Sbjct:     1 MASLVYGTPWLRVRSLP--ELAPA-FLRRRQSSLFYCSRRSFAVVAC-STPVNN-GGSVR 55

Query:    58 VRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWL 117
             VRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERST+ESE AVLQDLSWL
Sbjct:    56 VRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEAAVLQDLSWL 115

Query:   118 GLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQ 177
             GLDWDEGPGV GD+GPYRQSERN+LYKQYA+KLLESGHVYRCFCS+EEL KMKE AKLKQ
Sbjct:   116 GLDWDEGPGVSGDFGPYRQSERNALYKQYAEKLLESGHVYRCFCSSEELVKMKENAKLKQ 175

Query:   178 LPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFV 237
             LPPVYTGKWATA+DAE+++ELE+GTP+TYRFRVPK GSLKI+DLIRGEV WNLDTLGDFV
Sbjct:   176 LPPVYTGKWATASDAEIEQELEKGTPFTYRFRVPKEGSLKINDLIRGEVCWNLDTLGDFV 235

Query:   238 IMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLIL 297
             +MRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKAL F MP FAHVSLIL
Sbjct:   236 VMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALKFPMPQFAHVSLIL 295

Query:   298 APDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIER 357
             APDRSKLSKRHGATSVGQ+REMGYLPQ MVNYLALLGWGDGTENEFFTL+ LVEKF+IER
Sbjct:   296 APDRSKLSKRHGATSVGQYREMGYLPQGMVNYLALLGWGDGTENEFFTLEDLVEKFSIER 355

Query:   358 VNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKD 417
             VNKSGAIFDSTKLRWMNGQHLRA+P+ +LTKL+GERWKS GILTES+G FV+EA++LLKD
Sbjct:   356 VNKSGAIFDSTKLRWMNGQHLRALPNEKLTKLVGERWKSAGILTESEGSFVNEAVELLKD 415

Query:   418 GIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEG 477
             GI+LV DSDK L NLLSYPL  TL S E K  VED L EVAA L+AAYD GE+ +ALEEG
Sbjct:   416 GIELVTDSDKVLLNLLSYPLHATLASPEAKPAVEDKLHEVAASLIAAYDSGEIPSALEEG 475

Query:   478 HAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAE 537
                WQKWVK FGK+LKRKGKSLFMPLRVLLTGKLHGP+MG SI+LI+KAG+ GIV P+A 
Sbjct:   476 QGAWQKWVKAFGKSLKRKGKSLFMPLRVLLTGKLHGPEMGTSIVLIYKAGSPGIVVPQAG 535

Query:   538 FVTLDERFKMLRQVDWEALKKDQPA-LESAAATA 570
             FV+++ERFK+LR++DWEAL KD+   LES A  +
Sbjct:   536 FVSMEERFKILREIDWEALNKDESVPLESTATVS 569
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA
GO:0004818 "glutamate-tRNA ligase activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA
GO:0006424 "glutamyl-tRNA aminoacylation" evidence=IEA;ISS
GO:0016876 "ligase activity, forming aminoacyl-tRNA and related compounds" evidence=IEA
GO:0043039 "tRNA aminoacylation" evidence=IEA;TAS
GO:0005739 "mitochondrion" evidence=IDA
GO:0007005 "mitochondrion organization" evidence=TAS
GO:0009507 "chloroplast" evidence=IDA
GO:0009658 "chloroplast organization" evidence=TAS
GO:0048481 "ovule development" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0009570 "chloroplast stroma" evidence=IDA
TIGR_CMR|CHY_2340 CHY_2340 "glutamyl-tRNA synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|BA_0086 BA_0086 "glutamyl-tRNA synthetase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1219 GSU_1219 "glutamyl-tRNA synthetase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1365 DET_1365 "glutamyl-tRNA synthetase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2214 VC_2214 "glutamyl-tRNA synthetase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_1488 CBU_1488 "glutamyl-tRNA synthetase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|MAL13P1.281 MAL13P1.281 "glutamate--tRNA ligase, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IDD3 MAL13P1.281 "Glutamate--tRNA ligase, putative" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
UNIPROTKB|P04805 gltX "glutamyl-tRNA synthetase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q839V7SYE_ENTFA6, ., 1, ., 1, ., 1, 70.40700.80380.9463yesno
Q9FEA2SYE_ARATH6, ., 1, ., 1, ., 1, 70.79470.99120.9929yesno
Q250Q8SYE_DESHY6, ., 1, ., 1, ., 1, 70.42440.82660.9672yesno
A7Z0L4SYE_BACA26, ., 1, ., 1, ., 1, 70.42080.80030.9461yesno
Q43768SYE_HORVU6, ., 1, ., 1, ., 1, 70.75130.95090.9696N/Ano
A4XHE0SYE1_CALS86, ., 1, ., 1, ., 1, 70.45030.82130.9670yesno
Q3A9N9SYE_CARHZ6, ., 1, ., 1, ., 1, 70.48220.80560.9583yesno
B1HNM5SYE_LYSSC6, ., 1, ., 1, ., 1, 70.40570.80380.9444yesno
A9BGT8SYE2_PETMO6, ., 1, ., 1, ., 1, 70.42180.80210.9385yesno
B0TBU3SYE_HELMI6, ., 1, ., 1, ., 1, 70.44480.83360.9596yesno
Q6MKR6SYE_BDEBA6, ., 1, ., 1, ., 1, 70.42770.80210.9346yesno
A6LJ42SYE1_THEM46, ., 1, ., 1, ., 1, 70.42700.80030.9661yesno
B2A4B3SYE_NATTJ6, ., 1, ., 1, ., 1, 70.43150.81080.9487yesno
A5D5L8SYE_PELTS6, ., 1, ., 1, ., 1, 70.46650.80560.9583yesno
Q9KGF6SYE_BACHD6, ., 1, ., 1, ., 1, 70.42530.80380.9463yesno
A0AF36SYE_LISW66, ., 1, ., 1, ., 1, 70.39490.80030.9307yesno
P22250SYE_BACSU6, ., 1, ., 1, ., 1, 70.41820.80210.9482yesno
A4IJG6SYE_GEOTN6, ., 1, ., 1, ., 1, 70.42250.80910.9447yesno
Q65PD0SYE_BACLD6, ., 1, ., 1, ., 1, 70.41820.80560.9484yesno
Q67TJ2SYE_SYMTH6, ., 1, ., 1, ., 1, 70.41260.80560.9543yesno
A8MLB5SYE_ALKOO6, ., 1, ., 1, ., 1, 70.39230.82660.9535yesno
Q43794SYE_TOBAC6, ., 1, ., 1, ., 1, 70.77310.98240.9859N/Ano
B0KCH7SYE1_THEP36, ., 1, ., 1, ., 1, 70.41660.80730.9505yesno
Q5L431SYE_GEOKA6, ., 1, ., 1, ., 1, 70.41440.80210.9346yesno
Q8YAB3SYE_LISMO6, ., 1, ., 1, ., 1, 70.39070.80030.9307yesno
Q5WLT5SYE_BACSK6, ., 1, ., 1, ., 1, 70.42650.80380.9463yesno
Q8R7T1SYE2_THETN6, ., 1, ., 1, ., 1, 70.43360.81260.9567yesno
B0K5F4SYE1_THEPX6, ., 1, ., 1, ., 1, 70.41660.80730.9505yesno
B1I4Z1SYE_DESAP6, ., 1, ., 1, ., 1, 70.40670.81080.9241yesno
A4J0Y7SYE_DESRM6, ., 1, ., 1, ., 1, 70.45390.81610.9668yesno
Q724H5SYE_LISMF6, ., 1, ., 1, ., 1, 70.39280.80030.9307yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.170.979
3rd Layer6.1.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query571
PLN02627535 PLN02627, PLN02627, glutamyl-tRNA synthetase 0.0
PRK01406476 PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed 0.0
TIGR00464470 TIGR00464, gltX_bact, glutamyl-tRNA synthetase, ba 0.0
COG0008472 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synth 1e-165
pfam00749314 pfam00749, tRNA-synt_1c, tRNA synthetases class I 1e-126
PRK12558445 PRK12558, PRK12558, glutamyl-tRNA synthetase; Prov 1e-115
PRK12410433 PRK12410, PRK12410, glutamylglutaminyl-tRNA synthe 1e-103
PRK14895513 PRK14895, gltX, glutamyl-tRNA synthetase; Provisio 8e-87
PRK05710299 PRK05710, PRK05710, glutamyl-Q tRNA(Asp) synthetas 1e-78
cd00808239 cd00808, GluRS_core, catalytic core domain of disc 2e-76
TIGR03838271 TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA 5e-72
cd00808239 cd00808, GluRS_core, catalytic core domain of disc 9e-63
cd00418230 cd00418, GlxRS_core, catalytic core domain of glut 1e-48
PRK04156567 PRK04156, gltX, glutamyl-tRNA synthetase; Provisio 3e-46
cd00418230 cd00418, GlxRS_core, catalytic core domain of glut 4e-41
TIGR00463556 TIGR00463, gltX_arch, glutamyl-tRNA synthetase, ar 1e-39
cd09287240 cd09287, GluRS_non_core, catalytic core domain of 2e-25
PTZ00402601 PTZ00402, PTZ00402, glutamyl-tRNA synthetase; Prov 1e-17
cd00807238 cd00807, GlnRS_core, catalytic core domain of glut 1e-15
PRK14703 771 PRK14703, PRK14703, glutaminyl-tRNA synthetase/Yqe 6e-14
TIGR00440522 TIGR00440, glnS, glutaminyl-tRNA synthetase 1e-13
PLN02907722 PLN02907, PLN02907, glutamate-tRNA ligase 9e-13
PLN03233523 PLN03233, PLN03233, putative glutamate-tRNA ligase 1e-12
PRK05347554 PRK05347, PRK05347, glutaminyl-tRNA synthetase; Pr 2e-11
cd09287240 cd09287, GluRS_non_core, catalytic core domain of 5e-11
PTZ00437574 PTZ00437, PTZ00437, glutaminyl-tRNA synthetase; Pr 3e-08
PLN02859788 PLN02859, PLN02859, glutamine-tRNA ligase 1e-07
>gnl|CDD|178234 PLN02627, PLN02627, glutamyl-tRNA synthetase Back     alignment and domain information 
 Score = 1016 bits (2628), Expect = 0.0
 Identities = 416/545 (76%), Positives = 463/545 (84%), Gaps = 10/545 (1%)

Query: 1   MASIVAATPWSRIRTITKLELAPPIFLQSSVYYCKRRRFSVAASLSTNTNKVDGQVRVRF 60
             S+V  TP   IR +   ELAPP   +S      RRRFSV A+ +  +    G VRVRF
Sbjct: 1   AMSLVGGTP---IRLLP--ELAPPFLRRSRSS---RRRFSVRAAAAGESK--GGPVRVRF 50

Query: 61  APSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWLGLD 120
           APSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDL RSTKESEEAVL+DL WLGLD
Sbjct: 51  APSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLARSTKESEEAVLRDLKWLGLD 110

Query: 121 WDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQLPP 180
           WDEGP VGG+YGPYRQSERN++YKQYA+KLLESGHVY CFC++EELE MKE A+LK+LPP
Sbjct: 111 WDEGPDVGGEYGPYRQSERNAIYKQYAEKLLESGHVYPCFCTDEELEAMKEEAELKKLPP 170

Query: 181 VYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFVIMR 240
            YTGKWATA+D EVQ EL +GTPYTYRFRVPK GS+KI DLIRGEVSWN DTLGDFV++R
Sbjct: 171 RYTGKWATASDEEVQAELAKGTPYTYRFRVPKEGSVKIDDLIRGEVSWNTDTLGDFVLLR 230

Query: 241 SNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLILAPD 300
           SNGQPVYNFCV VDDATM I+HVIRAEEHLPNTLRQALIYKALGF MP FAHVSLILAPD
Sbjct: 231 SNGQPVYNFCVAVDDATMGITHVIRAEEHLPNTLRQALIYKALGFPMPRFAHVSLILAPD 290

Query: 301 RSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNK 360
           RSKLSKRHGATSVGQFREMGYLP AMVNYLALLGW DGTENE FTL++LVEKF+I+R+NK
Sbjct: 291 RSKLSKRHGATSVGQFREMGYLPDAMVNYLALLGWNDGTENEIFTLEELVEKFSIDRINK 350

Query: 361 SGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQLLKDGID 420
           SGA+FDSTKL+WMNGQHLR +P  EL KL+GERWKS GIL ES G FV EA++LLKDGI+
Sbjct: 351 SGAVFDSTKLKWMNGQHLRLLPEEELVKLVGERWKSAGILKESDGSFVKEAVELLKDGIE 410

Query: 421 LVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEGHAG 480
           LV D+DK L NLLSYPL  TL+S E K++VEDN SEVA  L+AAYD GEL AALEEGH G
Sbjct: 411 LVTDADKELLNLLSYPLAATLSSPEAKTVVEDNFSEVADALIAAYDSGELAAALEEGHDG 470

Query: 481 WQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVT 540
           WQKWVK FGK LKRKGK LFMPLRV LTGK+HGPD+G S++L+HKAGT   V+ +A FV 
Sbjct: 471 WQKWVKAFGKALKRKGKRLFMPLRVALTGKMHGPDVGESLVLLHKAGTPDSVTEQAGFVP 530

Query: 541 LDERF 545
           L++RF
Sbjct: 531 LEDRF 535

Length = 535
>gnl|CDD|234953 PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|232986 TIGR00464, gltX_bact, glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>gnl|CDD|223087 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|216096 pfam00749, tRNA-synt_1c, tRNA synthetases class I (E and Q), catalytic domain Back     alignment and domain information
>gnl|CDD|183594 PRK12558, PRK12558, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237094 PRK12410, PRK12410, glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|184889 PRK14895, gltX, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235573 PRK05710, PRK05710, glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173905 cd00808, GluRS_core, catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|234370 TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>gnl|CDD|173905 cd00808, GluRS_core, catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185672 cd00418, GlxRS_core, catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|235229 PRK04156, gltX, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|185672 cd00418, GlxRS_core, catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|232985 TIGR00463, gltX_arch, glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>gnl|CDD|185682 cd09287, GluRS_non_core, catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|240404 PTZ00402, PTZ00402, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|185676 cd00807, GlnRS_core, catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237793 PRK14703, PRK14703, glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|232977 TIGR00440, glnS, glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215492 PLN02907, PLN02907, glutamate-tRNA ligase Back     alignment and domain information
>gnl|CDD|178772 PLN03233, PLN03233, putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>gnl|CDD|235424 PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|185682 cd09287, GluRS_non_core, catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|240418 PTZ00437, PTZ00437, glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|178450 PLN02859, PLN02859, glutamine-tRNA ligase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 571
PLN02627535 glutamyl-tRNA synthetase 100.0
KOG1149524 consensus Glutamyl-tRNA synthetase (mitochondrial) 100.0
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 100.0
PRK12558445 glutamyl-tRNA synthetase; Provisional 100.0
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 100.0
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 100.0
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 100.0
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 100.0
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 100.0
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 100.0
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 100.0
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 100.0
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 100.0
PLN03233523 putative glutamate-tRNA ligase; Provisional 100.0
PTZ00402601 glutamyl-tRNA synthetase; Provisional 100.0
cd00808239 GluRS_core catalytic core domain of discriminating 100.0
PLN02859788 glutamine-tRNA ligase 100.0
PRK05347554 glutaminyl-tRNA synthetase; Provisional 100.0
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 100.0
PLN02907722 glutamate-tRNA ligase 100.0
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 100.0
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 100.0
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 100.0
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 100.0
cd09287240 GluRS_non_core catalytic core domain of non-discri 100.0
KOG1147712 consensus Glutamyl-tRNA synthetase [Translation, r 100.0
KOG1148764 consensus Glutaminyl-tRNA synthetase [Translation, 100.0
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.95
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 99.9
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 99.88
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 99.85
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 99.85
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 99.83
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 99.79
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 99.79
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 99.78
PLN02946557 cysteine-tRNA ligase 99.77
PRK12418384 cysteinyl-tRNA synthetase; Provisional 99.76
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 99.73
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 99.73
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 99.72
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.63
PTZ00399651 cysteinyl-tRNA-synthetase; Provisional 99.58
PRK11893511 methionyl-tRNA synthetase; Reviewed 99.51
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 99.5
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 99.48
PLN02286576 arginine-tRNA ligase 99.47
PRK12451562 arginyl-tRNA synthetase; Reviewed 99.46
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 99.45
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 99.41
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 99.36
KOG2007586 consensus Cysteinyl-tRNA synthetase [Translation, 99.35
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 99.34
cd00674353 LysRS_core_class_I catalytic core domain of class 99.32
PLN02224616 methionine-tRNA ligase 99.31
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 99.3
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 99.28
PRK00133673 metG methionyl-tRNA synthetase; Reviewed 99.28
PRK12267648 methionyl-tRNA synthetase; Reviewed 99.23
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 99.21
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 99.17
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.15
PRK12268556 methionyl-tRNA synthetase; Reviewed 99.14
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 99.14
PLN02610 801 probable methionyl-tRNA synthetase 99.13
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 99.07
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 98.98
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 98.9
PRK13208 800 valS valyl-tRNA synthetase; Reviewed 98.84
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 98.75
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 98.7
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 98.38
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 98.37
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 98.35
PRK08560329 tyrosyl-tRNA synthetase; Validated 98.28
PRK12282333 tryptophanyl-tRNA synthetase II; Reviewed 98.24
COG0180314 TrpS Tryptophanyl-tRNA synthetase [Translation, ri 98.08
KOG0436578 consensus Methionyl-tRNA synthetase [Translation, 98.08
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 98.07
TIGR00392 861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 97.92
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 97.91
PRK12283398 tryptophanyl-tRNA synthetase; Reviewed 97.9
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 97.87
PRK12284431 tryptophanyl-tRNA synthetase; Reviewed 97.84
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 97.84
PLN02943 958 aminoacyl-tRNA ligase 97.77
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 97.77
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 97.75
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 97.71
PRK00927333 tryptophanyl-tRNA synthetase; Reviewed 97.71
PRK13354410 tyrosyl-tRNA synthetase; Provisional 97.65
PLN02843 974 isoleucyl-tRNA synthetase 97.61
PTZ00126383 tyrosyl-tRNA synthetase; Provisional 97.59
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 97.58
PLN02563 963 aminoacyl-tRNA ligase 97.56
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 97.55
PRK05912408 tyrosyl-tRNA synthetase; Validated 97.55
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 97.44
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 97.34
PLN02381 1066 valyl-tRNA synthetase 97.32
PLN02882 1159 aminoacyl-tRNA ligase 97.29
COG0525 877 ValS Valyl-tRNA synthetase [Translation, ribosomal 97.24
PLN02486383 aminoacyl-tRNA ligase 97.2
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 97.06
PLN02886389 aminoacyl-tRNA ligase 97.0
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 96.91
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 96.78
PTZ00348 682 tyrosyl-tRNA synthetase; Provisional 96.77
PLN029591084 aminoacyl-tRNA ligase 95.42
KOG0432 995 consensus Valyl-tRNA synthetase [Translation, ribo 95.03
KOG0435 876 consensus Leucyl-tRNA synthetase [Translation, rib 94.86
TIGR00234377 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy 94.83
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 94.0
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 93.54
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 93.43
PRK12300 897 leuS leucyl-tRNA synthetase; Reviewed 93.27
COG0060 933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 92.81
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 92.57
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 92.25
KOG4426656 consensus Arginyl-tRNA synthetase [Translation, ri 91.79
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 91.69
PRK05743912 ileS isoleucyl-tRNA synthetase; Reviewed 90.86
PLN02943 958 aminoacyl-tRNA ligase 89.91
PLN02882 1159 aminoacyl-tRNA ligase 89.71
COG0525877 ValS Valyl-tRNA synthetase [Translation, ribosomal 88.66
PRK13804961 ileS isoleucyl-tRNA synthetase; Provisional 88.15
PLN02843974 isoleucyl-tRNA synthetase 87.97
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 87.49
cd02156105 nt_trans nucleotidyl transferase superfamily. nt_t 84.49
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 82.16
PLN02959 1084 aminoacyl-tRNA ligase 80.7
TIGR00396842 leuS_bact leucyl-tRNA synthetase, eubacterial and 80.27
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information 
Probab=100.00  E-value=5.4e-144  Score=1171.69  Aligned_cols=533  Identities=78%  Similarity=1.264  Sum_probs=486.0

Q ss_pred             ccccCCCcceeeeccccccCCCceecccccccccccccceecccCCCCCCCCceEEEeCCCCCCcCchhhHHHHHHHHHH
Q 008289            3 SIVAATPWSRIRTITKLELAPPIFLQSSVYYCKRRRFSVAASLSTNTNKVDGQVRVRFAPSPTGNLHVGGARTALFNYLF   82 (571)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vr~RFAPSPtG~LHiG~~rtAl~n~l~   82 (571)
                      ++++|||   +|++|+  ++|+.++-+.+   ++++|++.....+..  ..++|||||||||||+|||||||||||||+|
T Consensus         3 ~~~~~~~---~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~vr~RFAPSPTG~LHiG~aRtAL~n~l~   72 (535)
T PLN02627          3 SLVGGTP---IRLLPE--LAPPFLRRSRS---SRRRFSVRAAAAGES--KGGPVRVRFAPSPTGNLHVGGARTALFNYLF   72 (535)
T ss_pred             hhhcCCc---ceeecc--ccccccccccc---cccceeeeecccccC--CCCceEEEeCCCCCCCccHHHHHHHHHHHHH
Confidence            5678888   899999  88888887766   378888888865421  2667999999999999999999999999999


Q ss_pred             HHHcCCeEEEEecCCCcccCcHHHHHHHHHHHHHcCCCCCCCCCCCCCccceeccccHHHHHHHHHHHHHcCCcccccCC
Q 008289           83 ARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCS  162 (571)
Q Consensus        83 Ar~~~G~fiLRieDTD~~R~~~~~~~~i~~~L~wlGl~~Degp~~~g~~gpy~QSer~~~Y~~~a~~Li~~G~AY~Cfcs  162 (571)
                      ||++||+|||||||||++|++++++++|+++|+||||+|||||++||+||||+||+|+++|+++|++|+++|+||+||||
T Consensus        73 Ar~~gG~fiLRIEDTD~~R~~~e~~~~I~~~L~WLGl~wDegp~~gg~~gpy~QSeR~~~Y~~~a~~Li~~G~AY~CfCs  152 (535)
T PLN02627         73 ARSKGGKFVLRIEDTDLARSTKESEEAVLRDLKWLGLDWDEGPDVGGEYGPYRQSERNAIYKQYAEKLLESGHVYPCFCT  152 (535)
T ss_pred             HHHhCCEEEEEeCcCCCCCCChHHHHHHHHHHHHcCCCCCcCcccCCCCCCeeeeccHHHHHHHHHHHHHcCCeeeccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCcCCCCCHHHHHHHHhcCCCceEEEecCCCCceEEEeeccceeeccCCCCCCeEEEecC
Q 008289          163 NEELEKMKEIAKLKQLPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGDFVIMRSN  242 (571)
Q Consensus       163 ~eel~~~r~~~~~~~~~~~Y~g~cr~l~~~e~~~~~~~g~~~~iR~k~~~~~~~~~~D~v~G~i~~~~~~~~D~Vl~Rsd  242 (571)
                      ++|++++|+.+...+.++.|+|+||+++.+++.+++.+|.+++||||+|.++.++|+|+|+|++.+++..++||||+|+|
T Consensus       153 ~eel~~~r~~~~~~~~~~~Yd~~cr~l~~ee~~~~~~~g~~~~iR~k~p~~~~~~~~D~i~G~i~~~~~~~~D~Vi~R~D  232 (535)
T PLN02627        153 DEELEAMKEEAELKKLPPRYTGKWATASDEEVQAELAKGTPYTYRFRVPKEGSVKIDDLIRGEVSWNTDTLGDFVLLRSN  232 (535)
T ss_pred             hHHHHHHHHHHHhcCCCcCCCCccccCCHHHHHHHHhCCCCceEEEEcCCCCceEEEeeeeeeeeeccccCCCeEEEecC
Confidence            99999999988888889999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             CccccchhhhHhhhcCCCcEEEeCCCCCCCHHHHHHHHHHhCCCCCcEEEeeeeecCCCCcccccCCCCchHHHHHCCCC
Q 008289          243 GQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYL  322 (571)
Q Consensus       243 G~PtY~fA~vVDD~~m~ItHVIRG~Dhl~ntp~q~~l~~alg~~~P~f~H~pli~~~~g~KLSKR~g~~~v~~~r~~G~~  322 (571)
                      |+||||||||||||+|||||||||+||++|||+|++||+||||++|.|+|+|+|++.+|+|||||+|+++|.+||++||+
T Consensus       233 G~PtY~fA~vVDD~~mgITHViRG~D~l~nTpkQi~ly~aLg~~~P~f~Hlpli~~~~g~KLSKR~~~~~v~~~r~~G~~  312 (535)
T PLN02627        233 GQPVYNFCVAVDDATMGITHVIRAEEHLPNTLRQALIYKALGFPMPRFAHVSLILAPDRSKLSKRHGATSVGQFREMGYL  312 (535)
T ss_pred             CCccccccceecccccCCcEEEechhhhcChHHHHHHHHHcCCCCCeEEEccceeCCCCCccccccCCccHHHHHHCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCcccCCHHHHHHhcCccccccCCCcccHHHHHHhhHHHHhcCChhHHHHHHHHHHHHcCCCCC
Q 008289          323 PQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTE  402 (571)
Q Consensus       323 Peai~n~l~~lG~~~~~~~e~~s~~eli~~F~~~~~~~s~~~fd~~kL~wlN~~~ir~l~~~~l~~~~~~~~~~~~~~~~  402 (571)
                      |+||+|||++|||++++++|+||++||+++|++++++++|++||.+||.|||++||++++.+++.+++.+++.+.|+...
T Consensus       313 PeAi~nyla~LGws~~~~~e~~~~~eli~~F~l~~v~~s~~~fD~~KL~wlN~~yir~l~~~el~~~~~p~l~~~~~~~~  392 (535)
T PLN02627        313 PDAMVNYLALLGWNDGTENEIFTLEELVEKFSIDRINKSGAVFDSTKLKWMNGQHLRLLPEEELVKLVGERWKSAGILKE  392 (535)
T ss_pred             HHHHHHHHHHhCCCCCCCCCcCCHHHHHHhCCHhhCCCcccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcCCCcc
Confidence            99999999999999887789999999999999999999999999999999999999999999999999999998877533


Q ss_pred             CCchhHHHHHHHHhccccchhhHHHHHHhhhcCCcccCCCchhchhhccccHHHHHHHHHHHHcCCchhhhhhhchHhHH
Q 008289          403 SKGPFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQ  482 (571)
Q Consensus       403 ~~~~~l~~~~~l~k~r~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~evl~~lL~~L~~~~~~~~~~~~~e~i~  482 (571)
                      .+.+|+.+++.++++|++++.|+.+++.+||.++....++.++.++.+.+...+++..+...+++..+.....|+.++++
T Consensus       393 ~~~~~l~~~~~l~~~ri~~L~d~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~l~~~~~~~~~~~~  472 (535)
T PLN02627        393 SDGSFVKEAVELLKDGIELVTDADKELLNLLSYPLAATLSSPEAKTVVEDNFSEVADALIAAYDSGELAAALEEGHDGWQ  472 (535)
T ss_pred             ccHHHHHHHHHHHHHhcCcHHHHHHHHHHHhcCCCccccChHHHHHhhhHHHHHHHHHHHHHHhcccccccccCCHHHHH
Confidence            34578999999999999999999999998886442223333333444333444566666655654332111235689999


Q ss_pred             HHHHHHHHHhCCCchhhhhHHHHHHhCCCCCCChHHHHHHHhHHhHHhhhhhhcccCChHHHH
Q 008289          483 KWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAGTHGIVSPRAEFVTLDERF  545 (571)
Q Consensus       483 ~~ik~i~k~~giK~k~lf~pLRvALTG~~~GP~L~~imeLLGke~~l~Rl~~~~~fv~~~~~~  545 (571)
                      .+++++++++|+|+|++|||||+||||+.+||+|+++|++||||++++||.+..+||+|++||
T Consensus       473 ~~~~~~~e~~g~k~k~l~~PlR~AlTG~~~gP~l~~~~~lLGke~~~~Rl~~~~~~~~~~~~~  535 (535)
T PLN02627        473 KWVKAFGKALKRKGKRLFMPLRVALTGKMHGPDVGESLVLLHKAGTPDSVTEQAGFVPLEDRF  535 (535)
T ss_pred             HHHHHHHHHhCCCHHHhHHHHHHHHcCCCCCCCHHHHHHHhCHHHHHHHhhccCCccchHhcC
Confidence            999999999999999999999999999999999999999999999999999999999999996

>KOG1149 consensus Glutamyl-tRNA synthetase (mitochondrial) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK08560 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PRK00927 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PTZ00126 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PLN02886 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PTZ00348 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>KOG0432 consensus Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00234 tyrS tyrosyl-tRNA synthetase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG4426 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd02156 nt_trans nucleotidyl transferase superfamily Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query571
2o5r_A481 Crystal Structure Of Glutamyl-Trna Synthetase 1 (Ec 1e-100
3al0_C592 Crystal Structure Of The Glutamine Transamidosome F 5e-95
3afh_A488 Crystal Structure Of Thermotoga Maritima Nondiscrim 7e-95
3akz_B487 Crystal Structure Of Thermotoga Maritima Nondiscrim 8e-95
4gri_A512 Crystal Structure Of A Glutamyl-Trna Synthetase Glu 3e-93
2cfo_A492 Non-discriminating Glutamyl-trna Synthetase From Th 4e-87
1j09_A468 Crystal Structure Of Thermus Thermophilus Glutamyl- 9e-84
1g59_A468 Glutamyl-Trna Synthetase Complexed With Trna(Glu). 3e-82
4g6z_A490 Crystal Structure Of A Glutamyl-Trna Synthetase Glu 2e-81
3pny_A505 Structure Of Glutamyl-Trna Synthetase From Mycobact 1e-72
2ja2_A498 Mycobacterium Tuberculosis Glutamyl-Trna Synthetase 1e-72
3pnv_A505 V369m Mutant Of Glutamyl-Trna Synthetase From Mycob 2e-72
3aii_A553 Archaeal Non-Discriminating Glutamyl-Trna Synthetas 8e-32
1nzj_A298 Crystal Structure And Activity Studies Of Escherich 6e-27
2hz7_A 851 Crystal Structure Of The Glutaminyl-Trna Synthetase 2e-14
2rd2_A556 Glutaminyl-Trna Synthetase Mutant C229r With Bound 3e-09
1euq_A548 Crystal Structure Of Glutaminyl-Trna Synthetase Com 2e-08
1qrs_A553 Glutaminyl-Trna Synthetase Mutant D235n Complexed W 2e-08
1nyl_A539 Unliganded Glutaminyl-Trna Synthetase Length = 539 2e-08
1o0b_A554 Crystal Structure Of L-Glutamine And Ampcpp Bound T 2e-08
1gsg_P553 Structure Of E.Coli Glutaminyl-Trna Synthetase Comp 2e-08
1qrt_A553 Glutaminyl-Trna Synthetase Mutant D235g Complexed W 2e-08
1qru_A553 Glutaminyl-Trna Synthetase Mutant I129t Complexed W 2e-08
>pdb|2O5R|A Chain A, Crystal Structure Of Glutamyl-Trna Synthetase 1 (Ec 6.1.1.17) (Glutamate-Trna Ligase 1) (Glurs 1) (Tm1351) From Thermotoga Maritima At 2.5 A Resolution Length = 481 Back     alignment and structure 
Iteration: 1

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/479 (43%), Positives = 288/479 (60%), Gaps = 33/479 (6%)
Query: 56  VRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLS 115
           VRVRFAPSPTG LHVGGARTALFN+LFAR + GKF+LRIEDTDLERS +E EE + + L 
Sbjct: 14  VRVRFAPSPTGFLHVGGARTALFNFLFARKEKGKFILRIEDTDLERSEREYEEKLXESLR 73
Query: 116 WLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKL 175
           WLGL WDEGP VGGD+GPYRQSER  +Y+++A++L++ G  Y  +   EE+E+ +E    
Sbjct: 74  WLGLLWDEGPDVGGDHGPYRQSERVEIYREHAERLVKEGKAYYVYAYPEEIEEXREKLLS 133
Query: 176 KQLPPVYTGKWATATDA-EVQKELE-RGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTL 233
           +   P Y+ +     D  E ++E E +G      F+ P+   + ++D+++GEV +    +
Sbjct: 134 EGKAPHYSQEXFEKFDTPERRREYEEKGLRPAVFFKXPRKDYV-LNDVVKGEVVFKTGAI 192
Query: 234 GDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHV 293
           GDFVI RSNG P YNF   VDD    I+HVIR ++HL NTLRQ  +Y+A   + P FAHV
Sbjct: 193 GDFVIXRSNGLPTYNFACVVDDXLXEITHVIRGDDHLSNTLRQLALYEAFEKAPPVFAHV 252
Query: 294 SLILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKF 353
           S IL PD  KLSKRHGATSV  FR+ GYLP+A+VNYLALLGW      E  TL++L+  F
Sbjct: 253 STILGPDGKKLSKRHGATSVEAFRDXGYLPEALVNYLALLGWSHPEGKELLTLEELISSF 312
Query: 354 TIERVNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTGILTESKGPFVDEAIQ 413
           +++R++ + AIFD  KL+W NG +LR  P  +L +L    ++  GI        +DE  +
Sbjct: 313 SLDRLSPNPAIFDPQKLKWXNGYYLRNXPIEKLAELAKPFFEKAGI------KIIDE--E 364
Query: 414 LLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVAAHLLAAYDGGELLAA 473
             K  +++  +  + LS              E +   ED      A +    +  E+ + 
Sbjct: 365 YFKKVLEITKERVEVLSEF----------PEESRFFFED-----PAPVEIPEEXKEVFSQ 409
Query: 474 LEE--GHAGW--QKWVKGFGKTLKRKG---KSLFMPLRVLLTGKLHGPDMGASILLIHK 525
           L+E   +  W  ++    F K LK+ G   K  +  LR +LTG+  GP++   I L+ K
Sbjct: 410 LKEELQNVRWTXEEITPVFKKVLKQHGVKPKEFYXTLRRVLTGREEGPELVNIIPLLGK 468
>pdb|3AL0|C Chain C, Crystal Structure Of The Glutamine Transamidosome From Thermotoga Maritima In The Glutamylation State Length = 592 Back     alignment and structure
>pdb|3AFH|A Chain A, Crystal Structure Of Thermotoga Maritima Nondiscriminating Glutamyl- Trna Synthetase In Complex With A Glutamyl-Amp Analog Length = 488 Back     alignment and structure
>pdb|3AKZ|B Chain B, Crystal Structure Of Thermotoga Maritima Nondiscriminating Glutamyl- Trna Synthetase In Complex With Trnagln And A Glutamyl-Amp Analog Length = 487 Back     alignment and structure
>pdb|4GRI|A Chain A, Crystal Structure Of A Glutamyl-Trna Synthetase Glurs From Borrelia Burgdorferi Bound To Glutamic Acid And Zinc Length = 512 Back     alignment and structure
>pdb|2CFO|A Chain A, Non-discriminating Glutamyl-trna Synthetase From Thermosynechococcus Elongatus In Complex With Glu Length = 492 Back     alignment and structure
>pdb|1J09|A Chain A, Crystal Structure Of Thermus Thermophilus Glutamyl-Trna Synthetase Complexed With Atp And Glu Length = 468 Back     alignment and structure
>pdb|1G59|A Chain A, Glutamyl-Trna Synthetase Complexed With Trna(Glu). Length = 468 Back     alignment and structure
>pdb|4G6Z|A Chain A, Crystal Structure Of A Glutamyl-Trna Synthetase Glurs From Burkholderia Thailandensis Bound To L-Glutamate Length = 490 Back     alignment and structure
>pdb|3PNY|A Chain A, Structure Of Glutamyl-Trna Synthetase From Mycobacterium Tuberculosis In Space Group P21 Length = 505 Back     alignment and structure
>pdb|2JA2|A Chain A, Mycobacterium Tuberculosis Glutamyl-Trna Synthetase Length = 498 Back     alignment and structure
>pdb|3PNV|A Chain A, V369m Mutant Of Glutamyl-Trna Synthetase From Mycobacterium Tuberculosis Length = 505 Back     alignment and structure
>pdb|3AII|A Chain A, Archaeal Non-Discriminating Glutamyl-Trna Synthetase From Methanothermobacter Thermautotrophicus Length = 553 Back     alignment and structure
>pdb|1NZJ|A Chain A, Crystal Structure And Activity Studies Of Escherichia Coli Yadb Orf Length = 298 Back     alignment and structure
>pdb|2HZ7|A Chain A, Crystal Structure Of The Glutaminyl-Trna Synthetase From Deinococcus Radiodurans Length = 851 Back     alignment and structure
>pdb|2RD2|A Chain A, Glutaminyl-Trna Synthetase Mutant C229r With Bound Analog 5'-O-[n-(L- Glutaminyl)-Sulfamoyl]adenosine Length = 556 Back     alignment and structure
>pdb|1EUQ|A Chain A, Crystal Structure Of Glutaminyl-Trna Synthetase Complexed With A Trna- Gln Mutant And An Active-Site Inhibitor Length = 548 Back     alignment and structure
>pdb|1QRS|A Chain A, Glutaminyl-Trna Synthetase Mutant D235n Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure
>pdb|1NYL|A Chain A, Unliganded Glutaminyl-Trna Synthetase Length = 539 Back     alignment and structure
>pdb|1O0B|A Chain A, Crystal Structure Of L-Glutamine And Ampcpp Bound To Glutamine Aminoacyl Trna Synthetase Length = 554 Back     alignment and structure
>pdb|1GSG|P Chain P, Structure Of E.Coli Glutaminyl-Trna Synthetase Complexed With Trnagln And Atp At 2.8 Angstroms Resolution Length = 553 Back     alignment and structure
>pdb|1QRT|A Chain A, Glutaminyl-Trna Synthetase Mutant D235g Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure
>pdb|1QRU|A Chain A, Glutaminyl-Trna Synthetase Mutant I129t Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query571
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 0.0
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 0.0
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 0.0
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 0.0
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 0.0
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 0.0
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 0.0
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 1e-144
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 2e-35
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 9e-16
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 5e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 4e-11
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Length = 481 Back     alignment and structure
 Score =  678 bits (1753), Expect = 0.0
 Identities = 200/487 (41%), Positives = 288/487 (59%), Gaps = 22/487 (4%)

Query: 41  VAASLSTNTNKVDGQVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLE 100
            +  +  + +     VRVRFAPSPTG LHVGGARTALFN+LFAR + GKF+LRIEDTDLE
Sbjct: 2   GSDKIHHHHHH---MVRVRFAPSPTGFLHVGGARTALFNFLFARKEKGKFILRIEDTDLE 58

Query: 101 RSTKESEEAVLQDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCF 160
           RS +E EE +++ L WLGL WDEGP VGGD+GPYRQSER  +Y+++A++L++ G  Y  +
Sbjct: 59  RSEREYEEKLMESLRWLGLLWDEGPDVGGDHGPYRQSERVEIYREHAERLVKEGKAYYVY 118

Query: 161 CSNEELEKMKEIAKLKQLPPVYTGKWA--TATDAEVQKELERGTPYTYRFRVPKGGSLKI 218
              EE+E+M+E    +   P Y+ +      T    ++  E+G      F++P+   + +
Sbjct: 119 AYPEEIEEMREKLLSEGKAPHYSQEMFEKFDTPERRREYEEKGLRPAVFFKMPRKDYV-L 177

Query: 219 SDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQAL 278
           +D+++GEV +    +GDFVIMRSNG P YNF   VDD  M I+HVIR ++HL NTLRQ  
Sbjct: 178 NDVVKGEVVFKTGAIGDFVIMRSNGLPTYNFACVVDDMLMEITHVIRGDDHLSNTLRQLA 237

Query: 279 IYKALGFSMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDG 338
           +Y+A   + P FAHVS IL PD  KLSKRHGATSV  FR+MGYLP+A+VNYLALLGW   
Sbjct: 238 LYEAFEKAPPVFAHVSTILGPDGKKLSKRHGATSVEAFRDMGYLPEALVNYLALLGWSHP 297

Query: 339 TENEFFTLKQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRAIPSNELTKLIGERWKSTG 398
              E  TL++L+  F+++R++ + AIFD  KL+WMNG +LR +P  +L +L    ++  G
Sbjct: 298 EGKELLTLEELISSFSLDRLSPNPAIFDPQKLKWMNGYYLRNMPIEKLAELAKPFFEKAG 357

Query: 399 ILTESKGPFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGKSIVEDNLSEVA 458
           I       +  + +++ K+ ++++ +          +   D              + E  
Sbjct: 358 IKIID-EEYFKKVLEITKERVEVLSE----FPEESRFFFEDP---------APVEIPEEM 403

Query: 459 AHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGA 518
             + +     E L  +           K   K    K K  +M LR +LTG+  GP++  
Sbjct: 404 KEVFSQLK--EELQNVRWTMEEITPVFKKVLKQHGVKPKEFYMTLRRVLTGREEGPELVN 461

Query: 519 SILLIHK 525
            I L+ K
Sbjct: 462 IIPLLGK 468
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Length = 498 Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Length = 490 Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Length = 468 Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Length = 492 Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Length = 592 Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Length = 488 Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Length = 298 Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 553 Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Length = 553 Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Length = 851 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Length = 523 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query571
4gri_A512 Glutamate--tRNA ligase; structural genomics, seatt 100.0
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 100.0
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 100.0
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 100.0
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 100.0
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 100.0
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 100.0
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 100.0
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 100.0
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 100.0
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 100.0
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 100.0
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 100.0
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 99.89
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 99.89
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 99.88
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 99.87
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 99.85
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 99.83
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 99.8
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 99.8
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 99.78
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 99.72
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 99.71
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 99.71
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 99.66
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 99.66
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 99.58
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 99.56
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 99.5
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 99.26
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 99.22
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 99.15
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 99.15
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 99.11
3u1f_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 99.1
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 99.05
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 99.01
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 99.0
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 98.55
1h3f_A432 Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA sy 98.17
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 98.05
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 97.89
2cyc_A375 Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacy 97.88
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 97.87
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 97.84
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 97.84
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 97.79
1wkb_A 810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 97.79
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 97.67
2jan_A432 Tyrosyl-tRNA synthetase; protein biosynthesis, ami 97.63
2j5b_A348 Tyrosyl-tRNA synthetase; ligase, protein biosynthe 97.59
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 97.58
1ile_A 821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 97.56
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 97.53
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 97.51
3a04_A372 Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tR 97.48
2yxn_A322 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 97.44
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 97.42
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 97.38
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 97.37
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 97.32
3prh_A388 Tryptophanyl-tRNA synthetase; TRPRS, protein biosy 97.31
2ts1_A419 Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30 97.21
1wz2_A967 Leucyl-tRNA synthetase; ligase, riken structural g 97.19
1jil_A420 Tyrrs, tyrosyl-tRNA synthetase; truncation, based 97.13
2pid_A356 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 96.91
3p0j_A 690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 96.89
1y42_X392 Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tR 96.89
3n9i_A346 Tryptophanyl-tRNA synthetase; tryptophan-tRNA liga 96.79
3sz3_A341 Tryptophanyl-tRNA synthetase; structural genomics, 96.79
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 94.01
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 93.94
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 89.95
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 89.77
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 89.72
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 82.03
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
Probab=100.00  E-value=1e-132  Score=1097.64  Aligned_cols=483  Identities=36%  Similarity=0.627  Sum_probs=439.4

Q ss_pred             CCceEEEeCCCCCCcCchhhHHHHHHHHHHHHHcCCeEEEEecCCCcccCcHHHHHHHHHHHHHcCCCCCCCCCCCCCcc
Q 008289           53 DGQVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWLGLDWDEGPGVGGDYG  132 (571)
Q Consensus        53 ~~~vr~RFAPSPtG~LHiG~~rtAl~n~l~Ar~~~G~fiLRieDTD~~R~~~~~~~~i~~~L~wlGl~~Degp~~~g~~g  132 (571)
                      .++|||||||||||+||||||||||+||+|||++||+|||||||||++|++++|+++|+++|+||||+|||||.+||+||
T Consensus        22 ~~~vrtRFAPsPtG~LHiG~artAl~n~~~Ar~~~G~fiLRieDtD~~R~~~~~~~~I~~~L~wlGl~wDe~p~~~g~~~  101 (512)
T 4gri_A           22 MLSTRVRYAPSPTGLQHIGGIRTALFNYFFAKSCGGKFLLRIEDTDQSRYSPEAENDLYSSLKWLGISFDEGPVVGGDYA  101 (512)
T ss_dssp             --CCEEEECCCSSSCCBHHHHHHHHHHHHHHHHTTCEEEECBCCCCTTSCCHHHHHHHHHHHHHHTCCCSBBTTTBCTTC
T ss_pred             CCceeEEeCcCCCCcccHHHHHHHHHHHHHHHHcCCEEEEEeCcCCCCcCCHHHHHHHHHHHHHcCCCCCcCCccCCCCC
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeccccHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHhCCCCCCCCCcCCCCCHHHHHHHHhcCCCceEEEecCC
Q 008289          133 PYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQLPPVYTGKWATATDAEVQKELERGTPYTYRFRVPK  212 (571)
Q Consensus       133 py~QSer~~~Y~~~a~~Li~~G~AY~Cfcs~eel~~~r~~~~~~~~~~~Y~g~cr~l~~~e~~~~~~~g~~~~iR~k~~~  212 (571)
                      ||+||+|+++|++++++|+++|+||+||||++|+++.|+.+...+.++.|++.|++++.++..+...+|.++++|||+|.
T Consensus       102 py~QS~r~~~Y~~~~~~L~~~G~aY~C~ct~~el~~~r~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~R~k~~~  181 (512)
T 4gri_A          102 PYVQSQRSAIYKQYAKYLIESGHAYYCYCSPERLERIKKIQNINKMPPGYDRHCRNLSNEEVENALIKKIKPVVRFKIPL  181 (512)
T ss_dssp             CCBGGGCHHHHHHHHHHHHHTTSEEEECCCHHHHHHHHHHHHHTTCCCSCCCTTTTCCHHHHHHHHHTTCCCEEEECCCS
T ss_pred             CccccchHHHHHHHHHHHHHcCCccccccchHHHHHHHHhhhccCCCCccchhhcccchhhhhhhhhhhccceeeecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999988899999999999998


Q ss_pred             CCceEEEeeccceeeccCC-CCCCeEEEecCCccccchhhhHhhhcCCCcEEEeCCCCCCCHHHHHHHHHHhCCCCCcEE
Q 008289          213 GGSLKISDLIRGEVSWNLD-TLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFA  291 (571)
Q Consensus       213 ~~~~~~~D~v~G~i~~~~~-~~~D~Vl~RsdG~PtY~fA~vVDD~~m~ItHVIRG~Dhl~ntp~q~~l~~alg~~~P~f~  291 (571)
                      ++.+.|.|.++|++.+.+. ..+||||+|+||+||||||||||||+|||||||||+||++|||+|++||++|||++|.|+
T Consensus       182 ~~~~~~~D~v~g~i~~~~~~~~~D~vi~r~dg~PtY~fA~vVDD~~mgITHViRG~D~l~sTp~q~~l~~alg~~~P~y~  261 (512)
T 4gri_A          182 EGDTSFDDILLGRITWANKDISPDPVILKSDGLPTYHLANVVDDYLMKITHVLRAQEWVSSGPLHVLLYKAFKWKPPIYC  261 (512)
T ss_dssp             SCEEEEEETTTEEEEEEGGGSCSSCEEECTTSCBCHHHHHHHHHHHTTCSEEEEEGGGGGGHHHHHHHHHHHTCCCCEEE
T ss_pred             cCCceeeccccceEEecccccCCceEEEecCCcccccccceecccccCCceeccccccccccHHHHHHHHHcCCCCCeEE
Confidence            8999999999999998876 457999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeeeecCCCCcccccCCCCchHHHHHCCCCHHHHHHHHHHhCCCCCCCcccCCHHHHHHhcCccccccCCCcccHHHHH
Q 008289          292 HVSLILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNKSGAIFDSTKLR  371 (571)
Q Consensus       292 H~pli~~~~g~KLSKR~g~~~v~~~r~~G~~Peai~n~l~~lG~~~~~~~e~~s~~eli~~F~~~~~~~s~~~fd~~kL~  371 (571)
                      |+|+|++.+|+|||||+|+.+|.+||++||+||||+|||++||||+++++|+||++||++.|++++++++|++||++||.
T Consensus       262 H~pli~~~~g~kLSKR~~~~~v~~~~~~G~lPeAl~NyLalLGws~~~~~Eifs~~eli~~Fdl~~v~ks~a~fD~~KL~  341 (512)
T 4gri_A          262 HLPMVMGNDGQKLSKRHGSTALRQFIEDGYLPEAIINYVTLLGWSYDDKREFFSKNDLEQFFSIEKINKSPAIFDYHKLD  341 (512)
T ss_dssp             EECCCBCTTSSBCCTTTSCCBHHHHHHHTCCHHHHHHHHHHSSBCSSSSCCCCCHHHHHHHCCGGGBCSSCCBCCHHHHH
T ss_pred             ecchhccccccccCcccccccHHHHHHcCCChHHHHHHHHHhCCCCcccchhhhHHHHHHHHHhcCCCCCCccccHHHHH
Confidence            99999999999999999999999999999999999999999999999889999999999999999999999999999999


Q ss_pred             HhhHHHHhcCChhHHHHHHHHHHHHcCCCCC----CCchhHHHHHHHHhccccchhhHHHHHHhhhcCCcccCCCchhch
Q 008289          372 WMNGQHLRAIPSNELTKLIGERWKSTGILTE----SKGPFVDEAIQLLKDGIDLVPDSDKALSNLLSYPLRDTLTSSEGK  447 (571)
Q Consensus       372 wlN~~~ir~l~~~~l~~~~~~~~~~~~~~~~----~~~~~l~~~~~l~k~r~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  447 (571)
                      |||++||++++.+++.+++.+++.+.|+...    .+.+++.+++.++++|++++.|+.+++.+||..+...+.+....+
T Consensus       342 ~~N~~~i~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~l~k~r~~~l~di~~~~~~ff~~~~~~~~de~~~~  421 (512)
T 4gri_A          342 FFNSYYIREKKDEDLFNLLLPFFQKKGYVSKPSTLEENQKLKLLIPLIKSRIKKLSDALNMTKFFYEDIKSWNLDEFLSR  421 (512)
T ss_dssp             HHHHHHHHHSCHHHHHHHHHHHHHHHTSSCSSCCHHHHHHHHHHHHHHHTTCSSTTHHHHHTHHHHSCCCCCCGGGC---
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHcCCcccccchhhHHHHHHHHHHHHhhcccHHHHHHHHHHHhcCCCccCccHHHHH
Confidence            9999999999999999999999998887532    134688999999999999999999999988875432221221223


Q ss_pred             hhccccHHHHHHHHHHHHcCCchhhhhhhchHhHHHHHHHHHHHhCCCchhhhhHHHHHHhCCCCCCChHHHHHHHhHHh
Q 008289          448 SIVEDNLSEVAAHLLAAYDGGELLAALEEGHAGWQKWVKGFGKTLKRKGKSLFMPLRVLLTGKLHGPDMGASILLIHKAG  527 (571)
Q Consensus       448 ~~~~~~~~evl~~lL~~L~~~~~~~~~~~~~e~i~~~ik~i~k~~giK~k~lf~pLRvALTG~~~GP~L~~imeLLGke~  527 (571)
                      +...+...+++..+.+.++..+     +++.++++++++++++++|+|+|++|||||+||||+.+||+|+++|++||||+
T Consensus       422 k~~~~~~~~~L~~~~~~L~~~~-----~~~~e~i~~~i~~~~~~~g~K~k~l~~pLR~ALTG~~~GP~L~~i~~lLGkee  496 (512)
T 4gri_A          422 KKTAKEVCSILELIKPILEGFE-----KRSSEENDKIFYDFAESNGFKLGEILLPIRIAALGSKVSPPLFDSLKLIGKSK  496 (512)
T ss_dssp             ----CHHHHHHHHHHHHHTTGG-----GSCHHHHHHHHHHHHHHC---CHHHHHHHHHHHSSSSSCSCHHHHHHHHCHHH
T ss_pred             HhhHHHHHHHHHHHHHHHHcCC-----cCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhCCCcCcCHHHHHHHhCHHH
Confidence            3333444556666666665432     35788999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhcccCC
Q 008289          528 THGIVSPRAEFVT  540 (571)
Q Consensus       528 ~l~Rl~~~~~fv~  540 (571)
                      |++||+.|++++.
T Consensus       497 vl~RL~~Al~~lk  509 (512)
T 4gri_A          497 VFERIKLAQEFLR  509 (512)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999987754
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A* Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Back     alignment and structure
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii} Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} SCOP: c.26.1.0 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis} Back     alignment and structure
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus} Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Back     alignment and structure
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Back     alignment and structure
>3a04_A Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding, protein biosynthesis; 1.97A {Aeropyrum pernix} PDB: 3a05_A* Back     alignment and structure
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A* Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} SCOP: c.26.1.0 Back     alignment and structure
>3prh_A Tryptophanyl-tRNA synthetase; TRPRS, protein biosynthesis, translation, class I tRNA synth rossman fold, high motif, KMSKS motif; 2.80A {Bacillus subtilis} Back     alignment and structure
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A* Back     alignment and structure
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A* Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Back     alignment and structure
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A Back     alignment and structure
>3n9i_A Tryptophanyl-tRNA synthetase; tryptophan-tRNA ligase, csgid, structural genomics, niaid, center for structural genomics infectious diseases; 1.95A {Yersinia pestis} SCOP: c.26.1.1 Back     alignment and structure
>3sz3_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, rossmann fold; HET: TRP; 1.50A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 571
d1j09a2305 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS 1e-107
d1nzja_286 c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB 1e-78
d1gtra2331 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (Gln 5e-74
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 4e-23
d1j09a1163 a.97.1.1 (A:306-468) C-terminal domain of glutamyl 4e-14
d1irxa1204 a.97.1.2 (A:320-523) C-terminal domain of class I 4e-10
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Length = 305 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Glutamyl-tRNA synthetase (GluRS)
species: Thermus thermophilus [TaxId: 274]

 Score =  320 bits (822), Expect = e-107
 Identities = 134/310 (43%), Positives = 196/310 (63%), Gaps = 6/310 (1%)

Query: 56  VRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLS 115
           V  R APSPTG+ HVG A  ALFNY +AR  GG+F++RIEDTD  R    +EE +L  L 
Sbjct: 2   VVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAALK 61

Query: 116 WLGLDWDEGPGVGGDYGPYRQSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKL 175
           WLGL +DEGP VGG +GPYRQSER  LY++YA++LL+ G  YR F + EELE++++    
Sbjct: 62  WLGLSYDEGPDVGGPHGPYRQSERLPLYQKYAEELLKRGWAYRAFETPEELEQIRKE--- 118

Query: 176 KQLPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGSLKISDLIRGEVSWNLDTLGD 235
                 Y G+       E ++   RG P+  R +VP+ G+ ++ D +RG V ++   + D
Sbjct: 119 ---KGGYDGRARNIPPEEAEERARRGEPHVIRLKVPRPGTTEVKDELRGVVVYDNQEIPD 175

Query: 236 FVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSL 295
            V+++S+G P Y+    VDD  M ++ VIRAEE L +T    L+Y+A G+  P F H+ L
Sbjct: 176 VVLLKSDGYPTYHLANVVDDHLMGVTDVIRAEEWLVSTPIHVLLYRAFGWEAPRFYHMPL 235

Query: 296 ILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTI 355
           +  PD++K+SKR   TS+  ++  G+LP+A+ NYL L+G+      E FTL++ ++ FT 
Sbjct: 236 LRNPDKTKISKRKSHTSLDWYKAEGFLPEALRNYLCLMGFSMPDGREIFTLEEFIQAFTW 295

Query: 356 ERVNKSGAIF 365
           ERV+  G +F
Sbjct: 296 ERVSLGGPVF 305
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Length = 286 Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Length = 331 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1j09a1 a.97.1.1 (A:306-468) C-terminal domain of glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Length = 163 Back     information, alignment and structure
>d1irxa1 a.97.1.2 (A:320-523) C-terminal domain of class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 204 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query571
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 100.0
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 100.0
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 100.0
d1j09a1163 C-terminal domain of glutamyl-tRNA synthetase (Glu 99.95
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.73
d1irxa1204 C-terminal domain of class I lysyl-tRNA synthetase 99.7
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.42
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 99.42
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.41
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.33
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.27
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 99.19
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.09
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 98.9
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 98.68
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 97.76
d1h3fa1343 Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophi 97.66
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 97.43
d1n3la_339 Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapie 96.89
d1i6la_326 Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus ste 96.8
d1r6ta2386 Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo 96.65
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Glutamyl-tRNA synthetase (GluRS)
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.5e-94  Score=740.63  Aligned_cols=304  Identities=44%  Similarity=0.800  Sum_probs=295.0

Q ss_pred             eEEEeCCCCCCcCchhhHHHHHHHHHHHHHcCCeEEEEecCCCcccCcHHHHHHHHHHHHHcCCCCCCCCCCCCCcccee
Q 008289           56 VRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLQDLSWLGLDWDEGPGVGGDYGPYR  135 (571)
Q Consensus        56 vr~RFAPSPtG~LHiG~~rtAl~n~l~Ar~~~G~fiLRieDTD~~R~~~~~~~~i~~~L~wlGl~~Degp~~~g~~gpy~  135 (571)
                      |+||||||||||||||||||||+||++||++||+|||||||||++|++++|+++|++||+||||+||++|..+|++++|+
T Consensus         2 vvtRfaPsPtG~lHiG~~rtal~n~~~Ak~~~G~~iLRidDtD~~R~~~~~~~~I~~dL~wLgi~wD~~p~~~~~~~~~~   81 (305)
T d1j09a2           2 VVTRIAPSPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAALKWLGLSYDEGPDVGGPHGPYR   81 (305)
T ss_dssp             CEEEECCCCSSSCBHHHHHHHHHHHHHHHHTTCEEEECBCCCCTTSCCTTHHHHHHHHHHHTTCCCSBBTTTBCTTCCCB
T ss_pred             eEEecCCCCCCcccHHHHHHHHHHHHHHHHcCCEEEEEeCcCCCccCchHHHHHHHHHHHHHhcCcccCCcCCCCCccee
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHhCCCCCCCCCcCCCCCHHHHHHHHhcCCCceEEEecCCCCc
Q 008289          136 QSERNSLYKQYADKLLESGHVYRCFCSNEELEKMKEIAKLKQLPPVYTGKWATATDAEVQKELERGTPYTYRFRVPKGGS  215 (571)
Q Consensus       136 QSer~~~Y~~~a~~Li~~G~AY~Cfcs~eel~~~r~~~~~~~~~~~Y~g~cr~l~~~e~~~~~~~g~~~~iR~k~~~~~~  215 (571)
                      ||+|+++|.+++++|+++|+||+|+||++++++.++..      ..|+++|++++.++..+++..|.++++||+++..+.
T Consensus        82 qS~r~~~y~~~~~~Li~~g~aY~C~cs~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~R~k~~~~~~  155 (305)
T d1j09a2          82 QSERLPLYQKYAEELLKRGWAYRAFETPEELEQIRKEK------GGYDGRARNIPPEEAEERARRGEPHVIRLKVPRPGT  155 (305)
T ss_dssp             GGGCHHHHHHHHHHHHHHTSEEEECCCHHHHHHHHHHH------SSCCCGGGGSCHHHHHHHHHTTCCCEEEECCCSSCE
T ss_pred             eecchhHHHHHHHHHHHcCCeeeccccchhhhhhhhhc------cCCCCccccchhhhHHHHhhcCCcceEEEeccccCC
Confidence            99999999999999999999999999999999877542      358999999999999889999999999999998888


Q ss_pred             eEEEeeccceeeccCCCCCCeEEEecCCccccchhhhHhhhcCCCcEEEeCCCCCCCHHHHHHHHHHhCCCCCcEEEeee
Q 008289          216 LKISDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFSMPYFAHVSL  295 (571)
Q Consensus       216 ~~~~D~v~G~i~~~~~~~~D~Vl~RsdG~PtY~fA~vVDD~~m~ItHVIRG~Dhl~ntp~q~~l~~alg~~~P~f~H~pl  295 (571)
                      +.|+|.++|.+.+.+..++||||+|.||+|||||||||||++|||||||||+||++|||+|++|+++|||+.|.|+|+|+
T Consensus       156 ~~~~d~i~~~~~~~~~~~~D~vi~r~dg~p~Y~~A~vvDD~~~githviRG~Dl~~~t~~q~~l~~~Lg~~~p~~~h~~l  235 (305)
T d1j09a2         156 TEVKDELRGVVVYDNQEIPDVVLLKSDGYPTYHLANVVDDHLMGVTDVIRAEEWLVSTPIHVLLYRAFGWEAPRFYHMPL  235 (305)
T ss_dssp             EEEEETTTEEEEEEGGGSCCCEEECTTSCBCHHHHHHHHHHHTTCCEEEEEGGGGGGHHHHHHHHHHHTCCCCEEEEECC
T ss_pred             ccccchhhceeeeccccCCCeEEECCCCCeehHHHHHHHHHHccCccccccccceeccHHHHHHHHhhcCCCCceeeecc
Confidence            99999999999998889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCCcccccCCCCchHHHHHCCCCHHHHHHHHHHhCCCCCCCcccCCHHHHHHhcCccccccCCCcc
Q 008289          296 ILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGDGTENEFFTLKQLVEKFTIERVNKSGAIF  365 (571)
Q Consensus       296 i~~~~g~KLSKR~g~~~v~~~r~~G~~Peai~n~l~~lG~~~~~~~e~~s~~eli~~F~~~~~~~s~~~f  365 (571)
                      +++.+|+|||||+++.+|.+||++||+||||+|||++|||++++..+++|++|+++.|+++++++++++|
T Consensus       236 ~~~~~g~KLSKr~~~~tl~~lr~~G~~peai~~~l~~lG~~~~~~~~~~sl~e~i~~f~~~~v~k~~~~f  305 (305)
T d1j09a2         236 LRNPDKTKISKRKSHTSLDWYKAEGFLPEALRNYLCLMGFSMPDGREIFTLEEFIQAFTWERVSLGGPVF  305 (305)
T ss_dssp             CBCTTSCBCCTTTSCCBHHHHHHTTCCHHHHHHHHHHHSCCCTTCCSCCCHHHHHHHCCGGGCCCSCCBC
T ss_pred             cccCccccccccCCccCHHHHHHcCCCHHHHHHHHHHhCCCCCCCcCcCCHHHHHHhCCHhhCCCCCCCC
Confidence            9999999999999999999999999999999999999999988878999999999999999999999987
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j09a1 a.97.1.1 (A:306-468) C-terminal domain of glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1irxa1 a.97.1.2 (A:320-523) C-terminal domain of class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure