Citrus Sinensis ID: 008291

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-
MLQNPSFPWLLHLSGFFSQRNWNCKTKHLQPLASPISSGKLMRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISAEKTFDYIEGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKAMPFS
cccccccccHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHHccccccEEEEccccccccccccccccEEEEcccccccEEEEccccccEEEEcccccHHHHHHHHHHccccccccccccEEEEEcccccccccccccccccccccEEEEEEEEccccEEEEccccccHHHHHHHcccccEEEEEEEEEEEEEcccEEEEEEEEEccHHHHHHHHHHHHHccccccEEEEEEEEcccccccccccccccccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHcccccccccEEEEccHHHHHHHHcHHHHHHHccccccccccccccccccccHHHHHHHHHHHcccccccccEEEEcccccccccccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHcccccEEcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
cccccccHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHcccccccccHHHHHHHHHHccccccccccEEEccccHHHHHHHHHHHHHcccccccEEEEccccccccccccccccEEEEccHccccEEEEEcccccEEEEccHHHHHHHHHHHHHccccccccccHEEEEcccHEcccccccccccccccHHHcEEEEEEEccccEEEEcccccHHHHHHHHHcccccEEEEEEEEEccccccHEEEEEEEEccHHHHHHHHHHHHcccccccEEEEEEEEccccccccccccccccccccHHHHcccccEEEEEEEEEEccccccccccHHHHHHHHccccccccEEEccccHHHHHHHHHHHHHHHHHccccccccccHHEEccHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccEccccHEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHcccccEEcccccccHHHHHHHHcHHHHHHHHHHHHccHHHHccccccccccccccc
mlqnpsfpwllhLSGFfsqrnwncktkhlqplaspissgklmRYTAASFLRQNNMLFIRSFMVLFLCCITVKInlcfsgipyslktltldghlnfdEVHNAARdfgnryqllpsavlhpnsvsDIATTVKHIWEmgshseltvaarghghslqgqAQAHQGVVINmeslqgpkmqvyaENSFYVDVSGGELWINILHESVkyglapkswtdyLHLTVggtlsnagisgqafqhgpqisnvhqlevvtgkgeiincsekqnSELFHSVLGGLGQFGIITRarislepapdMVKWIRVLYSDFATFARDQEYLISAEKTFDYIEGFVMVNRTGllnnwrssfdpqdpvqasqfksdgqTLFCLELAKYINKDEKDLVNQEVESSLSVLNyipstlflsevsyiEFLDRVHVSEVKLrskglwevphpwlnlfipqskihdFAREVFGNIlaetsngpiliyplnkskwdnrtsvvipeeDVFYLVAFLSsavpsskgtdglEHILTQNKRILEYCETARLGvkqylphyttqeqwrshfgpqWEVFVQrkstydplailapgqrifqkampfs
MLQNPSFPWLLHLSGFFSQRNWNCKTKHLQPLASPISSGKLMRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISAEKTFDYIEGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSavpsskgtdgLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKAMPFS
MLQNPSFPWLLHLSGFFSQRNWNCKTKHLQPLASPISSGKLMRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISAEKTFDYIEGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKAMPFS
******FPWLLHLSGFFSQRNWNCKTKHLQPLASPISSGKLMRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARG**********AHQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISAEKTFDYIEGFVMVNRTGLLNNWRSSF*************DGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIF*******
****PSFPWLLHLSGFFSQRNWNCKTKHLQPLASPISS**LMRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISAEKTFDYIEGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQ******
MLQNPSFPWLLHLSGFFSQRNWNCKTKHLQPLASPISSGKLMRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISAEKTFDYIEGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKAMPFS
***NPSFPWLLHLSGFFSQRNWNCKTKHLQPLASPISSGKLMRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISAEKTFDYIEGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQ******
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLQNPSFPWLLHLSGFFSQRNWNCKTKHLQPLASPISSGKLMRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISAEKTFDYIEGFVMVNRTGLLNNWRSSFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKAMPFS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query571 2.2.26 [Sep-21-2011]
Q9LY71533 Cytokinin dehydrogenase 6 yes no 0.928 0.994 0.711 0.0
O22213575 Cytokinin dehydrogenase 1 no no 0.915 0.909 0.676 0.0
Q75K78521 Cytokinin dehydrogenase 9 yes no 0.847 0.928 0.684 0.0
Q5JLP4529 Cytokinin dehydrogenase 4 no no 0.854 0.922 0.665 0.0
Q67YU0540 Cytokinin dehydrogenase 5 no no 0.889 0.940 0.540 1e-160
Q5ZAY9534 Cytokinin dehydrogenase 5 no no 0.886 0.947 0.517 1e-144
Q9LTS3523 Cytokinin dehydrogenase 3 no no 0.807 0.881 0.492 1e-134
Q9FUJ1524 Cytokinin dehydrogenase 7 no no 0.809 0.881 0.486 1e-127
Q6YW51527 Cytokinin dehydrogenase 6 no no 0.875 0.948 0.439 1e-122
Q9FUJ2524 Cytokinin dehydrogenase 4 no no 0.807 0.879 0.455 1e-122
>sp|Q9LY71|CKX6_ARATH Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2 Back     alignment and function desciption
 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/533 (71%), Positives = 454/533 (85%), Gaps = 3/533 (0%)

Query: 42  MRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNA 101
           M Y  AS LR+  ML +RSF +L L CI  K+  CFS    SLK L L GHL F+ VH+A
Sbjct: 1   MSYLHASLLRKRTMLIVRSFTILLLSCIAFKLACCFSSSISSLKALPLVGHLEFEHVHHA 60

Query: 102 ARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQG 161
           ++DFGNRYQL+P AVLHP SVSDIA+T++HIW MG+HS+LTVAARG GHSLQGQAQ   G
Sbjct: 61  SKDFGNRYQLIPLAVLHPKSVSDIASTIRHIWMMGTHSQLTVAARGRGHSLQGQAQTRHG 120

Query: 162 VVINMESLQGPKMQVYAENSF--YVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGG 219
           +VI+MESL   K+QVY+ +S   YVDVSGGELWINILHE++KYGLAPKSWTDYLHLTVGG
Sbjct: 121 IVIHMESLHPQKLQVYSVDSPAPYVDVSGGELWINILHETLKYGLAPKSWTDYLHLTVGG 180

Query: 220 TLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITR 279
           TLSNAGISGQAF+HGPQISNVHQLE+VTGKGEI+NC+++QNS+LF+ VLGGLGQFGIITR
Sbjct: 181 TLSNAGISGQAFRHGPQISNVHQLEIVTGKGEILNCTKRQNSDLFNGVLGGLGQFGIITR 240

Query: 280 ARISLEPAPDMVKWIRVLYSDFATFARDQEYLISAE-KTFDYIEGFVMVNRTGLLNNWRS 338
           ARI+LEPAP MVKWIRVLY DFA FA+DQE LISA+   FDYIEGFV++NRTGLLN+WR 
Sbjct: 241 ARIALEPAPTMVKWIRVLYLDFAAFAKDQEQLISAQGHKFDYIEGFVIINRTGLLNSWRL 300

Query: 339 SFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEV 398
           SF  ++P++ASQFK DG+TL+CLELAKY+ +D KD++NQEV+ +LS L+Y+ STLF +EV
Sbjct: 301 SFTAEEPLEASQFKFDGRTLYCLELAKYLKQDNKDVINQEVKETLSELSYVTSTLFTTEV 360

Query: 399 SYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILI 458
           +Y  FLDRVHVSEVKLRSKG WEVPHPWLNL +P+SKI++FAR VFGNIL +TSNGP+++
Sbjct: 361 AYEAFLDRVHVSEVKLRSKGQWEVPHPWLNLLVPRSKINEFARGVFGNILTDTSNGPVIV 420

Query: 459 YPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARL 518
           YP+NKSKWDN+TS V PEE+VFYLVA L+SA P S G DG+E IL +N+RILE+ E A +
Sbjct: 421 YPVNKSKWDNQTSAVTPEEEVFYLVAILTSASPGSAGKDGVEEILRRNRRILEFSEEAGI 480

Query: 519 GVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKAMPFS 571
           G+KQYLPHYTT+E+WRSHFG +W  FV+RKS YDPLAILAPG RIFQKA+ +S
Sbjct: 481 GLKQYLPHYTTREEWRSHFGDKWGEFVRRKSRYDPLAILAPGHRIFQKAVSYS 533
Catalyzes the oxidation of cytokinins, a family of N(6)-substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 5EC: .EC: 9EC: 9EC: .EC: 1EC: 2
>sp|O22213|CKX1_ARATH Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1 Back     alignment and function description
>sp|Q75K78|CKX9_ORYSJ Cytokinin dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CKX9 PE=2 SV=1 Back     alignment and function description
>sp|Q5JLP4|CKX4_ORYSJ Cytokinin dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CKX4 PE=2 SV=1 Back     alignment and function description
>sp|Q67YU0|CKX5_ARATH Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZAY9|CKX5_ORYSJ Cytokinin dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CKX5 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 Back     alignment and function description
>sp|Q9FUJ1|CKX7_ARATH Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana GN=CKX7 PE=1 SV=1 Back     alignment and function description
>sp|Q6YW51|CKX6_ORYSJ Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6 PE=3 SV=1 Back     alignment and function description
>sp|Q9FUJ2|CKX4_ARATH Cytokinin dehydrogenase 4 OS=Arabidopsis thaliana GN=CKX4 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query571
255544111530 Cytokinin dehydrogenase, putative [Ricin 0.928 1.0 0.816 0.0
224075800517 cytokinin oxidase [Populus trichocarpa] 0.905 1.0 0.822 0.0
224114195530 cytokinin oxidase [Populus trichocarpa] 0.928 1.0 0.801 0.0
296085116607 unnamed protein product [Vitis vinifera] 0.928 0.873 0.800 0.0
225449955529 PREDICTED: cytokinin dehydrogenase 6 [Vi 0.924 0.998 0.801 0.0
449451894547 PREDICTED: cytokinin dehydrogenase 6-lik 0.950 0.992 0.753 0.0
356539470552 PREDICTED: cytokinin dehydrogenase 6-lik 0.949 0.981 0.750 0.0
356542934538 PREDICTED: cytokinin dehydrogenase 6-lik 0.928 0.985 0.758 0.0
357471161528 Cytokinin oxidase [Medicago truncatula] 0.917 0.992 0.753 0.0
296087052550 unnamed protein product [Vitis vinifera] 0.915 0.950 0.734 0.0
>gi|255544111|ref|XP_002513118.1| Cytokinin dehydrogenase, putative [Ricinus communis] gi|223548129|gb|EEF49621.1| Cytokinin dehydrogenase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  926 bits (2393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/530 (81%), Positives = 484/530 (91%)

Query: 42  MRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNA 101
           MR+   S  + NNMLFIR FM+L L C+TV+INLCFSG P SLKTL++ GH  FD++H A
Sbjct: 1   MRFLPISSHKLNNMLFIRGFMILLLSCMTVRINLCFSGNPSSLKTLSVQGHFTFDDLHYA 60

Query: 102 ARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQG 161
           A+DFGNR+QLLP AVLHP SVSDIATT+KHIW+MG HS+LTVAARGHGHSL GQAQAH+G
Sbjct: 61  AKDFGNRFQLLPFAVLHPRSVSDIATTIKHIWQMGPHSDLTVAARGHGHSLHGQAQAHRG 120

Query: 162 VVINMESLQGPKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTL 221
           VVINMESLQGPKMQV+A    YVDVSGGELWINIL ES+K+GLAPKSWTDYLHLTVGGTL
Sbjct: 121 VVINMESLQGPKMQVHAGKHPYVDVSGGELWINILRESLKHGLAPKSWTDYLHLTVGGTL 180

Query: 222 SNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRAR 281
           SNAG+SGQAF+HGPQISNVHQLEV+TG GE++NCSEKQN +LFH VLGGLGQFGIITRAR
Sbjct: 181 SNAGVSGQAFRHGPQISNVHQLEVITGTGEVVNCSEKQNGDLFHGVLGGLGQFGIITRAR 240

Query: 282 ISLEPAPDMVKWIRVLYSDFATFARDQEYLISAEKTFDYIEGFVMVNRTGLLNNWRSSFD 341
           ISLEPAPDMVKWIRVLYSDF TFARDQE LISAE TFDYIEGFV++NRTGLLNNWRSSF+
Sbjct: 241 ISLEPAPDMVKWIRVLYSDFNTFARDQESLISAENTFDYIEGFVIINRTGLLNNWRSSFN 300

Query: 342 PQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYI 401
           PQDP+QASQF+SDG+TLFCLELAKY  KD+ D +N+E+ + LS L YIPSTLFLSEV YI
Sbjct: 301 PQDPLQASQFESDGRTLFCLELAKYFKKDKTDKLNEEIMNLLSQLRYIPSTLFLSEVPYI 360

Query: 402 EFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPL 461
           EFLDRVHVSEVKLRSKGLWEVPHPWLNL +P+SKIH+FA EVFGNIL +TSNGPILIYP+
Sbjct: 361 EFLDRVHVSEVKLRSKGLWEVPHPWLNLLVPKSKIHNFAEEVFGNILTDTSNGPILIYPV 420

Query: 462 NKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVK 521
           NKSKWDNRTSVVIPEED+FYLVAFLSSAVPSS GTDGL+HILTQN+RILE+C+TARLG K
Sbjct: 421 NKSKWDNRTSVVIPEEDIFYLVAFLSSAVPSSTGTDGLKHILTQNRRILEFCDTARLGFK 480

Query: 522 QYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKAMPFS 571
           QYLPHYT+QE+W++HFGPQW+VF QRKS YDPLAILAPGQRIFQKA+PFS
Sbjct: 481 QYLPHYTSQEEWKAHFGPQWKVFAQRKSAYDPLAILAPGQRIFQKAIPFS 530

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224075800|ref|XP_002304773.1| cytokinin oxidase [Populus trichocarpa] gi|222842205|gb|EEE79752.1| cytokinin oxidase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224114195|ref|XP_002332424.1| cytokinin oxidase [Populus trichocarpa] gi|222832377|gb|EEE70854.1| cytokinin oxidase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296085116|emb|CBI28611.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225449955|ref|XP_002270841.1| PREDICTED: cytokinin dehydrogenase 6 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449451894|ref|XP_004143695.1| PREDICTED: cytokinin dehydrogenase 6-like [Cucumis sativus] gi|449532192|ref|XP_004173066.1| PREDICTED: cytokinin dehydrogenase 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356539470|ref|XP_003538221.1| PREDICTED: cytokinin dehydrogenase 6-like [Glycine max] Back     alignment and taxonomy information
>gi|356542934|ref|XP_003539919.1| PREDICTED: cytokinin dehydrogenase 6-like [Glycine max] Back     alignment and taxonomy information
>gi|357471161|ref|XP_003605865.1| Cytokinin oxidase [Medicago truncatula] gi|355506920|gb|AES88062.1| Cytokinin oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|296087052|emb|CBI33379.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query571
TAIR|locus:2087423533 CKX6 "cytokinin oxidase/dehydr 0.928 0.994 0.711 2.4e-211
TAIR|locus:2062714575 CKX1 "cytokinin oxidase/dehydr 0.907 0.900 0.682 2e-200
UNIPROTKB|Q5JLP4529 CKX4 "Cytokinin dehydrogenase 0.854 0.922 0.667 1.3e-185
TAIR|locus:2018437540 CKX5 "cytokinin oxidase 5" [Ar 0.879 0.929 0.544 1.6e-148
UNIPROTKB|Q5ZAY9534 CKX5 "Cytokinin dehydrogenase 0.877 0.938 0.524 6.5e-138
TAIR|locus:2164615523 CKX3 "cytokinin oxidase 3" [Ar 0.807 0.881 0.492 3.5e-123
TAIR|locus:1005716173524 CKX7 "cytokinin oxidase 7" [Ar 0.809 0.881 0.488 1.8e-117
TAIR|locus:2134423524 CKX4 "cytokinin oxidase 4" [Ar 0.831 0.906 0.452 8.4e-113
TAIR|locus:2050349501 CKX2 "cytokinin oxidase 2" [Ar 0.854 0.974 0.434 1.2e-111
UNIPROTKB|Q8LNV6527 CKX3 "Cytokinin dehydrogenase 0.875 0.948 0.450 1.6e-109
TAIR|locus:2087423 CKX6 "cytokinin oxidase/dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2043 (724.2 bits), Expect = 2.4e-211, P = 2.4e-211
 Identities = 379/533 (71%), Positives = 454/533 (85%)

Query:    42 MRYTAASFLRQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVHNA 101
             M Y  AS LR+  ML +RSF +L L CI  K+  CFS    SLK L L GHL F+ VH+A
Sbjct:     1 MSYLHASLLRKRTMLIVRSFTILLLSCIAFKLACCFSSSISSLKALPLVGHLEFEHVHHA 60

Query:   102 ARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQG 161
             ++DFGNRYQL+P AVLHP SVSDIA+T++HIW MG+HS+LTVAARG GHSLQGQAQ   G
Sbjct:    61 SKDFGNRYQLIPLAVLHPKSVSDIASTIRHIWMMGTHSQLTVAARGRGHSLQGQAQTRHG 120

Query:   162 VVINMESLQGPKMQVYAENSF--YVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGG 219
             +VI+MESL   K+QVY+ +S   YVDVSGGELWINILHE++KYGLAPKSWTDYLHLTVGG
Sbjct:   121 IVIHMESLHPQKLQVYSVDSPAPYVDVSGGELWINILHETLKYGLAPKSWTDYLHLTVGG 180

Query:   220 TLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITR 279
             TLSNAGISGQAF+HGPQISNVHQLE+VTGKGEI+NC+++QNS+LF+ VLGGLGQFGIITR
Sbjct:   181 TLSNAGISGQAFRHGPQISNVHQLEIVTGKGEILNCTKRQNSDLFNGVLGGLGQFGIITR 240

Query:   280 ARISLEPAPDMVKWIRVLYSDFATFARDQEYLISAE-KTFDYIEGFVMVNRTGLLNNWRS 338
             ARI+LEPAP MVKWIRVLY DFA FA+DQE LISA+   FDYIEGFV++NRTGLLN+WR 
Sbjct:   241 ARIALEPAPTMVKWIRVLYLDFAAFAKDQEQLISAQGHKFDYIEGFVIINRTGLLNSWRL 300

Query:   339 SFDPQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEV 398
             SF  ++P++ASQFK DG+TL+CLELAKY+ +D KD++NQEV+ +LS L+Y+ STLF +EV
Sbjct:   301 SFTAEEPLEASQFKFDGRTLYCLELAKYLKQDNKDVINQEVKETLSELSYVTSTLFTTEV 360

Query:   399 SYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILI 458
             +Y  FLDRVHVSEVKLRSKG WEVPHPWLNL +P+SKI++FAR VFGNIL +TSNGP+++
Sbjct:   361 AYEAFLDRVHVSEVKLRSKGQWEVPHPWLNLLVPRSKINEFARGVFGNILTDTSNGPVIV 420

Query:   459 YPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARL 518
             YP+NKSKWDN+TS V PEE+VFYLVA L+SA P S G DG+E IL +N+RILE+ E A +
Sbjct:   421 YPVNKSKWDNQTSAVTPEEEVFYLVAILTSASPGSAGKDGVEEILRRNRRILEFSEEAGI 480

Query:   519 GVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKAMPFS 571
             G+KQYLPHYTT+E+WRSHFG +W  FV+RKS YDPLAILAPG RIFQKA+ +S
Sbjct:   481 GLKQYLPHYTTREEWRSHFGDKWGEFVRRKSRYDPLAILAPGHRIFQKAVSYS 533
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA
GO:0009690 "cytokinin metabolic process" evidence=IEA
GO:0009823 "cytokinin catabolic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=IEA
GO:0019139 "cytokinin dehydrogenase activity" evidence=IEA;ISS;TAS
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010103 "stomatal complex morphogenesis" evidence=TAS
TAIR|locus:2062714 CKX1 "cytokinin oxidase/dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5JLP4 CKX4 "Cytokinin dehydrogenase 4" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2018437 CKX5 "cytokinin oxidase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZAY9 CKX5 "Cytokinin dehydrogenase 5" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2164615 CKX3 "cytokinin oxidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1005716173 CKX7 "cytokinin oxidase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134423 CKX4 "cytokinin oxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050349 CKX2 "cytokinin oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8LNV6 CKX3 "Cytokinin dehydrogenase 3" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LY71CKX6_ARATH1, ., 5, ., 9, 9, ., 1, 20.71100.92810.9943yesno
Q75K78CKX9_ORYSJ1, ., 5, ., 9, 9, ., 1, 20.68440.84760.9289yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.5.99.120.991
3rd Layer1.5.990.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query571
PLN02441525 PLN02441, PLN02441, cytokinin dehydrogenase 0.0
pfam09265280 pfam09265, Cytokin-bind, Cytokinin dehydrogenase 1 1e-154
COG0277459 COG0277, GlcD, FAD/FMN-containing dehydrogenases [ 1e-25
pfam01565139 pfam01565, FAD_binding_4, FAD binding domain 2e-24
TIGR01679419 TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase 3e-08
TIGR01678438 TIGR01678, FAD_lactone_ox, sugar 1,4-lactone oxida 9e-08
TIGR00387413 TIGR00387, glcD, glycolate oxidase, subunit GlcD 0.001
>gnl|CDD|215242 PLN02441, PLN02441, cytokinin dehydrogenase Back     alignment and domain information 
 Score =  977 bits (2529), Expect = 0.0
 Identities = 338/530 (63%), Positives = 417/530 (78%), Gaps = 14/530 (2%)

Query: 51  RQNNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFDEVH--NAARDFGNR 108
            ++ ML +R  ++LFL  +T  + LC S      K L+LDGHL+FD V   +A++DFGN 
Sbjct: 1   AKSLMLSLRLLLILFLSSLTSSVGLCSSPSSLLPKLLSLDGHLSFDPVSTASASKDFGNL 60

Query: 109 YQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMES 168
              LP+AVL+P+SV DIA+ V+  +  GS S LTVAARGHGHSL GQAQA  GVV++M S
Sbjct: 61  VHSLPAAVLYPSSVEDIASLVRAAY--GSSSPLTVAARGHGHSLNGQAQAPGGVVVDMRS 118

Query: 169 LQG----PKMQVYAENSFYVDVSGGELWINILHESVKYGLAPKSWTDYLHLTVGGTLSNA 224
           L+G    P + V + +  YVDVSGGELWI++L  ++K+GLAP+SWTDYL+LTVGGTLSNA
Sbjct: 119 LRGGVRGPPVIVVSGDGPYVDVSGGELWIDVLKATLKHGLAPRSWTDYLYLTVGGTLSNA 178

Query: 225 GISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISL 284
           GISGQAF+HGPQISNV +L+VVTGKGE++ CS  QNS+LF +VLGGLGQFGIITRARI+L
Sbjct: 179 GISGQAFRHGPQISNVLELDVVTGKGEVVTCSPTQNSDLFFAVLGGLGQFGIITRARIAL 238

Query: 285 EPAPDMVKWIRVLYSDFATFARDQEYLIS--AEKTFDYIEGFVMVNRTGLLNNWRSS-FD 341
           EPAP  V+WIRVLYSDF+TF RDQE LIS   E +FDY+EGFV+VNR GL+NNWRSS F 
Sbjct: 239 EPAPKRVRWIRVLYSDFSTFTRDQERLISRPPENSFDYVEGFVIVNRNGLINNWRSSFFS 298

Query: 342 PQDPVQASQFKSDGQTLFCLELAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYI 401
           P DPV+AS   SDG  L+CLE+AKY ++D  D V+QEVES L  L++IP  LF ++VSY+
Sbjct: 299 PSDPVRASSLPSDGGVLYCLEVAKYYDEDTSDTVDQEVESLLKRLSFIPGLLFTTDVSYV 358

Query: 402 EFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETSNGPILIYPL 461
           +FLDRVHV E+KLRSKGLWEVPHPWLNLF+P+S+I DF   VF  IL + +NGPIL+YPL
Sbjct: 359 DFLDRVHVEELKLRSKGLWEVPHPWLNLFVPKSRIADFDDGVFKGILLDGTNGPILVYPL 418

Query: 462 NKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVK 521
           N+SKWDNRTS VIP+ED+FYLVA L SA+P     D LEH+L QNK IL +CE A +GVK
Sbjct: 419 NRSKWDNRTSAVIPDEDIFYLVALLRSALP---SGDDLEHLLAQNKEILRFCEKAGIGVK 475

Query: 522 QYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKAMPFS 571
           QYLPHYTTQE+W+ HFGP+WE FV+RK+ +DPLAIL+PGQRIF +A    
Sbjct: 476 QYLPHYTTQEEWKRHFGPKWETFVRRKAKFDPLAILSPGQRIFNRASSSL 525

Length = 525
>gnl|CDD|204184 pfam09265, Cytokin-bind, Cytokinin dehydrogenase 1, FAD and cytokinin binding Back     alignment and domain information
>gnl|CDD|223354 COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|216574 pfam01565, FAD_binding_4, FAD binding domain Back     alignment and domain information
>gnl|CDD|130740 TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase Back     alignment and domain information
>gnl|CDD|233525 TIGR01678, FAD_lactone_ox, sugar 1,4-lactone oxidases Back     alignment and domain information
>gnl|CDD|129482 TIGR00387, glcD, glycolate oxidase, subunit GlcD Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 571
PLN02441525 cytokinin dehydrogenase 100.0
KOG1231505 consensus Proteins containing the FAD binding doma 100.0
PF09265281 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and c 100.0
PLN02805555 D-lactate dehydrogenase [cytochrome] 100.0
PRK11230499 glycolate oxidase subunit GlcD; Provisional 100.0
TIGR00387413 glcD glycolate oxidase, subunit GlcD. This protein 100.0
COG0277459 GlcD FAD/FMN-containing dehydrogenases [Energy pro 100.0
KOG1232511 consensus Proteins containing the FAD binding doma 100.0
TIGR01679419 bact_FAD_ox FAD-linked oxidoreductase. This model 100.0
TIGR01678438 FAD_lactone_ox sugar 1,4-lactone oxidases. This mo 100.0
TIGR01676541 GLDHase galactonolactone dehydrogenase. This model 100.0
TIGR01677557 pln_FAD_oxido plant-specific FAD-dependent oxidore 100.0
PLN02465573 L-galactono-1,4-lactone dehydrogenase 100.0
PRK11282352 glcE glycolate oxidase FAD binding subunit; Provis 100.0
PRK11183564 D-lactate dehydrogenase; Provisional 100.0
KOG1233613 consensus Alkyl-dihydroxyacetonephosphate synthase 99.97
KOG4730518 consensus D-arabinono-1, 4-lactone oxidase [Defens 99.96
PF01565139 FAD_binding_4: FAD binding domain This is only a s 99.94
KOG1262543 consensus FAD-binding protein DIMINUTO [General fu 99.92
PRK13905298 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.91
PRK12436305 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.87
PRK14652302 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.86
PRK13906307 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.85
TIGR00179284 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.81
PRK13903363 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.8
PRK14649295 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.76
PRK14653297 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.71
PRK14650302 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.64
PRK00046334 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.63
COG0812291 MurB UDP-N-acetylmuramate dehydrogenase [Cell enve 99.63
PRK14648354 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.58
PRK14651273 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.34
PF02913248 FAD-oxidase_C: FAD linked oxidases, C-terminal dom 99.24
PRK13904257 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.06
PF0803147 BBE: Berberine and berberine like ; InterPro: IPR0 98.36
PF04030259 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: I 96.97
PLN00107257 FAD-dependent oxidoreductase; Provisional 96.96
TIGR02963467 xanthine_xdhA xanthine dehydrogenase, small subuni 96.31
PRK09799258 putative oxidoreductase; Provisional 96.22
PF00941171 FAD_binding_5: FAD binding domain in molybdopterin 95.93
TIGR03312257 Se_sel_red_FAD probable selenate reductase, FAD-bi 95.9
PRK09971291 xanthine dehydrogenase subunit XdhB; Provisional 94.33
TIGR03195321 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta s 93.18
TIGR03199264 pucC xanthine dehydrogenase C subunit. This gene h 92.97
PLN02906 1319 xanthine dehydrogenase 92.61
COG1319284 CoxM Aerobic-type carbon monoxide dehydrogenase, m 89.77
PLN00192 1344 aldehyde oxidase 88.86
TIGR02969 1330 mam_aldehyde_ox aldehyde oxidase. Members of this 88.64
COG4630493 XdhA Xanthine dehydrogenase, iron-sulfur cluster a 87.33
>PLN02441 cytokinin dehydrogenase Back     alignment and domain information 
Probab=100.00  E-value=2.3e-96  Score=792.10  Aligned_cols=513  Identities=65%  Similarity=1.114  Sum_probs=476.4

Q ss_pred             hhHHHHHHHHHHHHhhcccccCcccCCCccccccccCCCeeecc--hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHH
Q 008291           53 NNMLFIRSFMVLFLCCITVKINLCFSGIPYSLKTLTLDGHLNFD--EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVK  130 (571)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~v~~~--~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~  130 (571)
                      +....+++++++++++.......|++........+.+.|++.+|  ++..|++||++.+...|.+|++|+|++||+++|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~s~d~g~~~~~~P~aVv~P~S~eDVa~iVr   82 (525)
T PLN02441          3 SLMLSLRLLLILFLSSLTSSVGLCSSPSSLLPKLLSLDGHLSFDPVSTASASKDFGNLVHSLPAAVLYPSSVEDIASLVR   82 (525)
T ss_pred             chHHHHHHHHHHHHHHhhhccCcccCcccccccccccCceEEeCHHHHHHHhcCcccccCCCCCEEEeCCCHHHHHHHHH
Confidence            45566889999999999999888876544444444579999999  7888999999999999999999999999999999


Q ss_pred             HHHHhCCCCCcEEEEEcCCCCCCCCCcCCCcEEEEcCCCCCC-----eEEEeCCcceEEEEcCCCcHHHHHHHHHhCCCc
Q 008291          131 HIWEMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGP-----KMQVYAENSFYVDVSGGELWINILHESVKYGLA  205 (571)
Q Consensus       131 ~a~~~~~~~~~~v~~rg~G~s~~g~~~~~~givIdl~~l~~i-----~i~i~~~~~~~v~v~aG~~~~~l~~~l~~~Gl~  205 (571)
                      +|++  +.++++|++||+|||+.|++.+.+||+|||++||+|     .++++.+. .+|+|+||++|.++++++.++|++
T Consensus        83 ~A~~--~~~~~~V~~rGgGHS~~G~a~~~~GivIdms~Ln~i~~~~~ii~vd~~~-~~VtV~aG~~~~dv~~~l~~~Gla  159 (525)
T PLN02441         83 AAYG--SSSPLTVAARGHGHSLNGQAQAPGGVVVDMRSLRGGVRGPPVIVVSGDG-PYVDVSGGELWIDVLKATLKHGLA  159 (525)
T ss_pred             HHhh--ccCCceEEEECCCcCCCCCccCCCeEEEECCCCCCcCccCceEEEcCCC-CEEEEcCCCCHHHHHHHHHHCCCc
Confidence            9984  227999999999999999999888999999999992     26788777 899999999999999999999999


Q ss_pred             cCCCCCCCceeecccccCCccCCCcccccCccccEEEEEEEecCCeEEEcCCCCCCchhHhhhcCCCCceEEEEEEEeee
Q 008291          206 PKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLE  285 (571)
Q Consensus       206 ~~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~levV~~~G~i~~~~~~~~~dL~~~~~Gs~G~~GIIt~~tl~l~  285 (571)
                      |++++++..+||||+++|+|+|+++++||.++|||+++|||+++|++++|++.+|+|||||++||+|+|||||++|++++
T Consensus       160 P~~~~d~~~~TVGG~ist~G~gg~s~ryG~~~d~Vl~leVVtadGevv~~s~~~n~DLF~Av~GglG~fGIIT~atlrL~  239 (525)
T PLN02441        160 PRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLELDVVTGKGEVVTCSPTQNSDLFFAVLGGLGQFGIITRARIALE  239 (525)
T ss_pred             cCCccccCceEEeEEcCCCCccccccccCcHHHhEEEEEEEeCCceEEEeCCCCChhHHHhhccCCCCcEEEEEEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCceEEEEEEeCCHHHHHHHHHHHHh--cCCccccccceEEecccccccccccc-CCCCCccccccCCCCCCeEEEEE
Q 008291          286 PAPDMVKWIRVLYSDFATFARDQEYLIS--AEKTFDYIEGFVMVNRTGLLNNWRSS-FDPQDPVQASQFKSDGQTLFCLE  362 (571)
Q Consensus       286 p~p~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~e~vd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le  362 (571)
                      |+|+.++|+.+.|.++++++++++.+++  .+..+||+|++++...++..++|+++ |.++++.++..++++++.+||+|
T Consensus       240 Pap~~v~~~~~~y~~~~~~~~d~~~li~~~~~~~~d~veg~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~le  319 (525)
T PLN02441        240 PAPKRVRWIRVLYSDFSTFTRDQERLISRPPENSFDYVEGFVIVNRNGLINNWRSSFFSPSDPVRASSLPSDGGVLYCLE  319 (525)
T ss_pred             ecCCceEEEEEEcCCHHHHHHHHHHHHhcCCCCCcceEeEEEEeCCCCceeeeecccCCccccchhhccccCCceEEEEE
Confidence            9999999999999999999999999987  24469999999998867788999986 88888888888888999999999


Q ss_pred             EeeecCCCChHHHHHHHHHHHhhcccCCCeeeeccchhhhhhhhhhhhHHHHHhcccccCCccceecccCcccHHHHHHH
Q 008291          363 LAKYINKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFARE  442 (571)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~~dv~y~~~l~~~~~~~~~~~~~~~W~~r~~~~d~~vP~s~i~~f~~~  442 (571)
                      +++||+..+.+.++++++.+++.|++.++..|..|++|++|++|++..+..++++|+|+++|||+|++||.+++.+|++.
T Consensus       320 ~~~~~~~~~~~~~~~~~~~ll~~L~~~~~~~~~~d~~y~~fl~rv~~~e~~lr~~G~W~~phPWlnlfvp~s~i~~f~~~  399 (525)
T PLN02441        320 VAKYYDEDTSDTVDQEVESLLKRLSFIPGLLFTTDVSYVDFLDRVHVEELKLRSKGLWEVPHPWLNLFVPKSRIADFDDG  399 (525)
T ss_pred             EEEeeCCCCccchhhHHHHHHhhcCCCCCCceecccCHHHHHHhhhhHHHHHhhcCCcCCCCchhheeCcHHHHHHHHHH
Confidence            99999988888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcccCCccEEEecCCCCCCCCCCCccCCCcceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCcee
Q 008291          443 VFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGVKQ  522 (571)
Q Consensus       443 v~~~il~~~~~g~i~~~p~~~~~~~~~~~~~~p~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~G~~~~~  522 (571)
                      ||+.|+.+..+|++++||+++.+|+.+.+.++|++++||+|++++.+.|+   ++.++++++||++|+++|++.|++.|+
T Consensus       400 v~~~i~~~~~~G~~liyP~~~~~~~~~~s~~~P~~~~~y~v~~l~~~~p~---~~~~~~~~~~n~~i~~~~~~~g~~~k~  476 (525)
T PLN02441        400 VFKGILLDGTNGPILVYPLNRSKWDNRTSAVIPDEDIFYLVALLRSALPS---GDDLEHLLAQNKEILRFCEKAGIGVKQ  476 (525)
T ss_pred             HHhhcccccCCCeEEEEecccccCCCCCccccCCCCeEEEEEEcCCCCCC---cccHHHHHHHHHHHHHHHHHcCCceEE
Confidence            99999887777999999999999999999999999999999999988773   347999999999999999999999999


Q ss_pred             ccCCCCCHHHHHHhhchhHHHHHHhhhcCCCCCCCCCCCcccCCCCCCC
Q 008291          523 YLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKAMPFS  571 (571)
Q Consensus       523 Yl~~~~~~~~w~~~yG~~~~~l~~lK~~yDP~~ifnPG~~If~~~~~~~  571 (571)
                      |+++|.++++|++|||.+|++|+++|++|||++||+|||+||++++.++
T Consensus       477 Yl~~~~~~~~W~~HfG~~w~~f~~~K~~yDP~~iL~pgq~if~~~~~~~  525 (525)
T PLN02441        477 YLPHYTTQEEWKRHFGPKWETFVRRKAKFDPLAILSPGQRIFNRASSSL  525 (525)
T ss_pred             cCCCCCCHHHHHHHhcchHHHHHHHHhhCCchhhcCCCCccCCCCCCCC
Confidence            9999999999999999999999999999999999999999999998764

>KOG1231 consensus Proteins containing the FAD binding domain [Energy production and conversion] Back     alignment and domain information
>PF09265 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and cytokinin binding; InterPro: IPR015345 This domain adopts an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold Back     alignment and domain information
>PLN02805 D-lactate dehydrogenase [cytochrome] Back     alignment and domain information
>PRK11230 glycolate oxidase subunit GlcD; Provisional Back     alignment and domain information
>TIGR00387 glcD glycolate oxidase, subunit GlcD Back     alignment and domain information
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>KOG1232 consensus Proteins containing the FAD binding domain [Energy production and conversion] Back     alignment and domain information
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase Back     alignment and domain information
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases Back     alignment and domain information
>TIGR01676 GLDHase galactonolactone dehydrogenase Back     alignment and domain information
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase Back     alignment and domain information
>PLN02465 L-galactono-1,4-lactone dehydrogenase Back     alignment and domain information
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional Back     alignment and domain information
>PRK11183 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>KOG1233 consensus Alkyl-dihydroxyacetonephosphate synthase [General function prediction only] Back     alignment and domain information
>KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms] Back     alignment and domain information
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage Back     alignment and domain information
>KOG1262 consensus FAD-binding protein DIMINUTO [General function prediction only] Back     alignment and domain information
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase Back     alignment and domain information
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage Back     alignment and domain information
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PF08031 BBE: Berberine and berberine like ; InterPro: IPR012951 This domain is found in the berberine bridge and berberine bridge-like enzymes, which are involved in the biosynthesis of numerous isoquinoline alkaloids Back     alignment and domain information
>PF04030 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: IPR007173 This domain is specific to D-arabinono-1,4-lactone oxidase 1 Back     alignment and domain information
>PLN00107 FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit Back     alignment and domain information
>PRK09799 putative oxidoreductase; Provisional Back     alignment and domain information
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain Back     alignment and domain information
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit Back     alignment and domain information
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional Back     alignment and domain information
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit Back     alignment and domain information
>TIGR03199 pucC xanthine dehydrogenase C subunit Back     alignment and domain information
>PLN02906 xanthine dehydrogenase Back     alignment and domain information
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion] Back     alignment and domain information
>PLN00192 aldehyde oxidase Back     alignment and domain information
>TIGR02969 mam_aldehyde_ox aldehyde oxidase Back     alignment and domain information
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query571
2exr_A524 X-Ray Structure Of Cytokinin OxidaseDEHYDROGENASE ( 1e-125
3s1d_A516 Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROG 1e-121
2qkn_A516 Crystal Structure Of Maize Cytokinin OxidaseDEHYDRO 1e-120
1w1o_A534 Native Cytokinin Dehydrogenase Length = 534 1e-120
2qpm_A516 Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROG 1e-120
3s1f_A516 Asp169glu Mutant Of Maize Cytokinin OxidaseDEHYDROG 1e-119
3s1e_A516 Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROG 1e-119
2bvf_A459 Crystal Structure Of 6-Hydoxy-D-Nicotine Oxidase Fr 5e-12
4aut_A468 Crystal Structure Of The Tuberculosis Drug Target D 4e-09
4fdn_A481 Mycobacterium Tuberculosis Dpre1 In Complex With Ct 4e-06
2vfr_A422 Alditol Oxidase From Streptomyces Coelicolor A3(2): 5e-06
4g3t_A403 Mycobacterium Smegmatis Dpre1 - Hexagonal Crystal F 1e-05
3pm9_A476 Crystal Structure Of A Putative Dehydrogenase (Rpa1 7e-04
4bca_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 7e-04
4bby_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 7e-04
4bc7_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 9e-04
>pdb|2EXR|A Chain A, X-Ray Structure Of Cytokinin OxidaseDEHYDROGENASE (CKX) FROM Arabidopsis Thaliana At5g21482 Length = 524 Back     alignment and structure 
Iteration: 1

 Score =  446 bits (1147), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/481 (48%), Positives = 312/481 (64%), Gaps = 19/481 (3%)
Query: 101 AARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSELTVAARGHGHSLQGQAQAHQ 160
           A RDFG    + P AV+ P    DIA  VK         +LTVAARG+GHS+ GQA A  
Sbjct: 50  AGRDFGGXNCVKPLAVVRPVGPEDIAGAVKAALR---SDKLTVAARGNGHSINGQAXAEG 106
Query: 161 GVVINMESLQGPKMQVY----AENSFYVDVSGGELWINILHESV-KYGLAPKSWTDYLHL 215
           G+V++  +      +V      + + +VDVSGG LW ++L   V +YGLAP+SWTDYL L
Sbjct: 107 GLVVDXSTTAENHFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGL 166
Query: 216 TVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFG 275
           TVGGTLSNAG+SGQAF++GPQ SNV +L+VVTG G+++ CSE +NSELF SVLGGLGQFG
Sbjct: 167 TVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQFG 226
Query: 276 IITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISA--EKTFDYIEGFVMVNRTGLL 333
           IITRAR+ L+PAPD V+WIRV+Y++F  F +D E+L+S   E +FDY+EGFV VN    +
Sbjct: 227 IITRARVLLQPAPDXVRWIRVVYTEFDEFTQDAEWLVSQKNESSFDYVEGFVFVNGADPV 286
Query: 334 NNWRS-SFDPQ---DPVQASQFKSDGQTLFCLELA-KYINKDEKDLVNQEVESSLSVLNY 388
           N W +    P    DP +  Q  S G  L+CLEL   Y + D    +++ VE  +  L +
Sbjct: 287 NGWPTVPLHPDHEFDPTRLPQ--SCGSVLYCLELGLHYRDSDSNSTIDKRVERLIGRLRF 344
Query: 389 IPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNIL 448
                F  ++ Y++FL RV  SE   +  G WE PHPWLNLF+ +  I DF R VF  ++
Sbjct: 345 NEGLRFEVDLPYVDFLLRVKRSEEIAKENGTWETPHPWLNLFVSKRDIGDFNRTVFKELV 404
Query: 449 AETSNGPILIYPLNKSKWDNRTSVVIPEE-DVFYLVAFLSSAVPSSKGTDGLEHILTQNK 507
               NGP L+YPL +S+WD+RTSVVIPEE ++FY+VA L    P +K    +E  + QN+
Sbjct: 405 KNGVNGPXLVYPLLRSRWDDRTSVVIPEEGEIFYIVALLRFVPPCAK-VSSVEKXVAQNQ 463
Query: 508 RILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKA 567
            I+ +C    +  K YLPHY +QE+W  HFG +W  FV RK+ +DP AIL+PGQ+IF ++
Sbjct: 464 EIVHWCVKNGIDYKLYLPHYKSQEEWIRHFGNRWSRFVDRKAXFDPXAILSPGQKIFNRS 523
Query: 568 M 568
           +
Sbjct: 524 L 524
>pdb|3S1D|A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine Length = 516 Back     alignment and structure
>pdb|2QKN|A Chain A, Crystal Structure Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Phenylurea Inhibitor Cppu Length = 516 Back     alignment and structure
>pdb|1W1O|A Chain A, Native Cytokinin Dehydrogenase Length = 534 Back     alignment and structure
>pdb|2QPM|A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Benzylurea Inhibitor Cpbu Length = 516 Back     alignment and structure
>pdb|3S1F|A Chain A, Asp169glu Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine Length = 516 Back     alignment and structure
>pdb|3S1E|A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine Length = 516 Back     alignment and structure
>pdb|2BVF|A Chain A, Crystal Structure Of 6-Hydoxy-D-Nicotine Oxidase From Arthrobacter Nicotinovorans. Crystal Form 3 (P1) Length = 459 Back     alignment and structure
>pdb|4AUT|A Chain A, Crystal Structure Of The Tuberculosis Drug Target Decaprenyl-Phosphoryl-Beta-D-Ribofuranose-2- Oxidoreductase (Dpre1) From Mycobacterium Smegmatis Length = 468 Back     alignment and structure
>pdb|4FDN|A Chain A, Mycobacterium Tuberculosis Dpre1 In Complex With Ct325 - Hexagonal Crystal Form Length = 481 Back     alignment and structure
>pdb|2VFR|A Chain A, Alditol Oxidase From Streptomyces Coelicolor A3(2): Native Enzyme Length = 422 Back     alignment and structure
>pdb|4G3T|A Chain A, Mycobacterium Smegmatis Dpre1 - Hexagonal Crystal Form Length = 403 Back     alignment and structure
>pdb|3PM9|A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution Length = 476 Back     alignment and structure
>pdb|4BCA|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Tyr578phe Mutant Length = 658 Back     alignment and structure
>pdb|4BBY|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Wild-Type Length = 658 Back     alignment and structure
>pdb|4BC7|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Arg419his Mutant Length = 658 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query571
2exr_A524 Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin 0.0
1w1o_A534 Cytokinin dehydrogenase 1; flavin, oxidoreductase, 1e-177
4feh_A481 Oxidoreductase DPRE1; alpha+beta, decaprenylphosph 6e-29
2vfr_A422 Xylitol oxidase, alditol oxidase; FAD, sugar, poly 2e-28
2bvf_A459 6-hydroxy-D-nicotine oxidase; autoflavinylation, e 5e-28
1zr6_A503 Glucooligosaccharide oxidase; alpha + beta, flavoe 3e-20
3rja_A473 Carbohydrate oxidase; protein-substrate analogue c 4e-20
2i0k_A561 Oxidoreductase; MIX alpha beta, covalent FAD, flav 4e-20
3vte_A518 Tetrahydrocannabinolic acid synthase; BI-covalent 8e-18
3fw9_A495 Reticuline oxidase; BI-covalent flavinylation, N-g 1e-17
3js8_A540 Cholesterol oxidase; cholsterol, organic solvent s 2e-17
2ipi_A521 Aclacinomycin oxidoreductase (aknox); anthracyclin 3e-15
2y3s_A530 TAML; oxidoreductase; HET: FAD TIR; 1.67A {Strepto 3e-14
2wdx_A523 Putative hexose oxidase; oxidoreductase-antibiotic 1e-13
3pop_A501 GILR oxidase; FAD binding protein, gilvocarcin, gi 1e-13
1e8g_A560 Vanillyl-alcohol oxidase; oxidoreductase, flavoenz 1e-10
2uuu_A584 Alkyldihydroxyacetonephosphate synthase; transfera 5e-10
3pm9_A476 Putative oxidoreductase; putative D-2-hydroxygluta 2e-07
1wvf_A520 4-cresol dehydrogenase [hydroxylating] flavoprote 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* Length = 524 Back     alignment and structure
 Score =  525 bits (1353), Expect = 0.0
 Identities = 231/498 (46%), Positives = 319/498 (64%), Gaps = 17/498 (3%)

Query: 84  LKTLTLDGHLNFDEV--HNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIWEMGSHSEL 141
            ++L + G +         A RDFG    + P AV+ P    DIA  VK         +L
Sbjct: 31  SESLNIQGEILCGGAAADIAGRDFGGMNCVKPLAVVRPVGPEDIAGAVKAAL---RSDKL 87

Query: 142 TVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQV----YAENSFYVDVSGGELWINILH 197
           TVAARG+GHS+ GQA A  G+V++M +      +V      + + +VDVSGG LW ++L 
Sbjct: 88  TVAARGNGHSINGQAMAEGGLVVDMSTTAENHFEVGYLSGGDATAFVDVSGGALWEDVLK 147

Query: 198 ESV-KYGLAPKSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCS 256
             V +YGLAP+SWTDYL LTVGGTLSNAG+SGQAF++GPQ SNV +L+VVTG G+++ CS
Sbjct: 148 RCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCS 207

Query: 257 EKQNSELFHSVLGGLGQFGIITRARISLEPAPDMVKWIRVLYSDFATFARDQEYLISA-- 314
           E +NSELF SVLGGLGQFGIITRAR+ L+PAPDMV+WIRV+Y++F  F +D E+L+S   
Sbjct: 208 EIENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVSQKN 267

Query: 315 EKTFDYIEGFVMVNRTGLLNNWRSSF--DPQDPVQASQFKSDGQTLFCLELAK-YINKDE 371
           E +FDY+EGFV VN    +N W +       +       +S G  L+CLEL   Y + D 
Sbjct: 268 ESSFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDS 327

Query: 372 KDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFI 431
              +++ VE  +  L +     F  ++ Y++FL RV  SE   +  G WE PHPWLNLF+
Sbjct: 328 NSTIDKRVERLIGRLRFNEGLRFEVDLPYVDFLLRVKRSEEIAKENGTWETPHPWLNLFV 387

Query: 432 PQSKIHDFAREVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPEE-DVFYLVAFLSSAV 490
            +  I DF R VF  ++    NGP+L+YPL +S+WD+RTSVVIPEE ++FY+VA L    
Sbjct: 388 SKRDIGDFNRTVFKELVKNGVNGPMLVYPLLRSRWDDRTSVVIPEEGEIFYIVALLRFVP 447

Query: 491 PSSKGTDGLEHILTQNKRILEYCETARLGVKQYLPHYTTQEQWRSHFGPQWEVFVQRKST 550
           P +     +E ++ QN+ I+ +C    +  K YLPHY +QE+W  HFG +W  FV RK+ 
Sbjct: 448 PCA-KVSSVEKMVAQNQEIVHWCVKNGIDYKLYLPHYKSQEEWIRHFGNRWSRFVDRKAM 506

Query: 551 YDPLAILAPGQRIFQKAM 568
           +DP+AIL+PGQ+IF +++
Sbjct: 507 FDPMAILSPGQKIFNRSL 524
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* Length = 534 Back     alignment and structure
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* Length = 481 Back     alignment and structure
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* Length = 422 Back     alignment and structure
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A* Length = 459 Back     alignment and structure
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A* Length = 503 Back     alignment and structure
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A* Length = 473 Back     alignment and structure
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A* Length = 561 Back     alignment and structure
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa} Length = 518 Back     alignment and structure
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 3fw8_A* 3fw7_A* 3fwa_A* Length = 495 Back     alignment and structure
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} Length = 540 Back     alignment and structure
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus} Length = 521 Back     alignment and structure
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A* Length = 530 Back     alignment and structure
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A* Length = 523 Back     alignment and structure
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A* Length = 501 Back     alignment and structure
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* Length = 560 Back     alignment and structure
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Length = 584 Back     alignment and structure
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Length = 476 Back     alignment and structure
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Length = 520 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query571
2exr_A524 Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin 100.0
1w1o_A534 Cytokinin dehydrogenase 1; flavin, oxidoreductase, 100.0
3pm9_A476 Putative oxidoreductase; putative D-2-hydroxygluta 100.0
4bby_A658 Alkyldihydroxyacetonephosphate synthase, peroxiso; 100.0
2uuu_A584 Alkyldihydroxyacetonephosphate synthase; transfera 100.0
3rja_A473 Carbohydrate oxidase; protein-substrate analogue c 100.0
3tsh_A500 Pollen allergen PHL P 4; flavoprotein, BI-covalent 100.0
3vte_A518 Tetrahydrocannabinolic acid synthase; BI-covalent 100.0
2bvf_A459 6-hydroxy-D-nicotine oxidase; autoflavinylation, e 100.0
1e8g_A560 Vanillyl-alcohol oxidase; oxidoreductase, flavoenz 100.0
1wvf_A520 4-cresol dehydrogenase [hydroxylating] flavoprote 100.0
3fw9_A495 Reticuline oxidase; BI-covalent flavinylation, N-g 100.0
1f0x_A571 DLDH, D-lactate dehydrogenase; oxidoreductase; HET 100.0
3pop_A501 GILR oxidase; FAD binding protein, gilvocarcin, gi 100.0
1zr6_A503 Glucooligosaccharide oxidase; alpha + beta, flavoe 100.0
2y3s_A530 TAML; oxidoreductase; HET: FAD TIR; 1.67A {Strepto 100.0
2ipi_A521 Aclacinomycin oxidoreductase (aknox); anthracyclin 100.0
2wdx_A523 Putative hexose oxidase; oxidoreductase-antibiotic 100.0
4feh_A481 Oxidoreductase DPRE1; alpha+beta, decaprenylphosph 100.0
2vfr_A422 Xylitol oxidase, alditol oxidase; FAD, sugar, poly 100.0
3js8_A540 Cholesterol oxidase; cholsterol, organic solvent s 100.0
2i0k_A561 Oxidoreductase; MIX alpha beta, covalent FAD, flav 100.0
1hsk_A326 UDP-N-acetylenolpyruvoylglucosamine reductase; pep 99.94
3tx1_A322 UDP-N-acetylenolpyruvoylglucosamine reductase; str 99.93
3i99_A357 UDP-N-acetylenolpyruvoylglucosamine reductase; str 99.91
1uxy_A340 MURB, uridine diphospho-N-acetylenolpyruvylglucosa 99.88
2gqt_A268 UDP-N-acetylenolpyruvylglucosamine reductase; pept 99.84
2yvs_A219 Glycolate oxidase subunit GLCE; oxidoreductase; 2. 99.81
1ffv_C287 CUTM, flavoprotein of carbon monoxide dehydrogenas 98.33
2w3s_A462 Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2 97.45
1n62_C288 Carbon monoxide dehydrogenase medium chain; CODH, 97.42
3nvz_B305 Xanthine dehydrogenase/oxidase; hydroxylase, homod 96.77
1t3q_C288 Quinoline 2-oxidoreductase medium subunit; QOR, mo 96.34
3hrd_C296 Nicotinate dehydrogenase FAD-subunit; selenium lig 95.8
3unc_A 1332 Xanthine dehydrogenase/oxidase; oxidoreductase; HE 90.16
1rm6_B324 4-hydroxybenzoyl-COA reductase beta subunit; xanth 86.97
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* Back     alignment and structure
Probab=100.00  E-value=1.7e-69  Score=594.82  Aligned_cols=503  Identities=46%  Similarity=0.835  Sum_probs=407.0

Q ss_pred             HHHHHHHHhhcccccCcc--cCCCcc-ccccccCCCeeecc--hhhhHhhhccCccCCCCcEEEeCCCHHHHHHHHHHHH
Q 008291           59 RSFMVLFLCCITVKINLC--FSGIPY-SLKTLTLDGHLNFD--EVHNAARDFGNRYQLLPSAVLHPNSVSDIATTVKHIW  133 (571)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~--~~~~~~-~l~~~~~~g~v~~~--~~~~~~~d~~~~~~~~p~~vv~P~s~~dv~~~v~~a~  133 (571)
                      .++...++.++....+..  -+.... -++.+.+.++|++|  ++..|++||+..+...|.+|++|+|++||+++|++|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~d~~~~~~~~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~   82 (524)
T 2exr_A            3 AYIEPYFLENDAEAASAATAAGKSTDGVSESLNIQGEILCGGAAADIAGRDFGGMNCVKPLAVVRPVGPEDIAGAVKAAL   82 (524)
T ss_dssp             -------------------------------CCCSSEEECSHHHHHHHTCCTTCCCCCCCSEEEECSSHHHHHHHHHHHH
T ss_pred             ccccchhhcCchhhhhccccccccHHHHHHhcCCCCeEEeCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHHH
Confidence            345555666666543321  011111 12223368999999  7788999998888999999999999999999999999


Q ss_pred             -HhCCCCCcEEEEEcCCCCCCCCCcCCCcEEEEcCCCCCCeEEE---e--CCcceEEEEcCCCcHHHHHHHHH-hCCCcc
Q 008291          134 -EMGSHSELTVAARGHGHSLQGQAQAHQGVVINMESLQGPKMQV---Y--AENSFYVDVSGGELWINILHESV-KYGLAP  206 (571)
Q Consensus       134 -~~~~~~~~~v~~rg~G~s~~g~~~~~~givIdl~~l~~i~i~i---~--~~~~~~v~v~aG~~~~~l~~~l~-~~Gl~~  206 (571)
                       +    +++||++||+|||+.|++.+.+||+|||++||+|+++.   +  .+. .+|+||||++|.++++++. ++|++|
T Consensus        83 ~~----~~~~v~~~GgGts~~g~~~~~~gvvidl~~m~~i~i~~~~~~~~~~~-~~v~v~aGv~~~~l~~~~l~~~Gl~~  157 (524)
T 2exr_A           83 RS----DKLTVAARGNGHSINGQAMAEGGLVVDMSTTAENHFEVGYLSGGDAT-AFVDVSGGALWEDVLKRCVSEYGLAP  157 (524)
T ss_dssp             HS----SSCCEEEESSSCCSSSTTCCTTSEEEEGGGGTTSCEEEEECCSSSSS-EEEEEETTCBHHHHHHHHHHHHSEEC
T ss_pred             hh----cCceEEEECCCcCCCCcccCCCEEEEECcCCCCcEEeecccCCCCCc-eEEEEeCCcCHHHHHHHHHHHcCCCC
Confidence             7    89999999999999999887789999999999975555   2  122 5999999999999877666 999998


Q ss_pred             CCCCCCCceeecccccCCccCCCcccccCccccEEEEEEEecCCeEEEcCCCCCCchhHhhhcCCCCceEEEEEEEeeee
Q 008291          207 KSWTDYLHLTVGGTLSNAGISGQAFQHGPQISNVHQLEVVTGKGEIINCSEKQNSELFHSVLGGLGQFGIITRARISLEP  286 (571)
Q Consensus       207 ~~~~~~~~~tvGG~~~~~g~g~~~~~~G~~~d~v~~levV~~~G~i~~~~~~~~~dL~~~~~Gs~G~~GIIt~~tl~l~p  286 (571)
                      +++++...+||||+++++|+|+++.+||.++|+|++++||++||++++++..+|+||+|+++||+|+|||||+++||++|
T Consensus       158 ~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~~~~dL~~~~~Gs~GtlGiIt~~tl~l~p  237 (524)
T 2exr_A          158 RSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQFGIITRARVLLQP  237 (524)
T ss_dssp             SCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTSSEEEEEEEEEEEE
T ss_pred             CCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCCCChhHHhHhhcCCCccEEEEEEEEEEEE
Confidence            88888888999999999999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             cCCceEEEEEEeCCHHHHHHHHHHHHhcC--CccccccceEEeccccccccccccCCC-CCccccccCCC-CCCeEEEEE
Q 008291          287 APDMVKWIRVLYSDFATFARDQEYLISAE--KTFDYIEGFVMVNRTGLLNNWRSSFDP-QDPVQASQFKS-DGQTLFCLE  362 (571)
Q Consensus       287 ~p~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~e~vd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~le  362 (571)
                      .|+.+.++.+.|.+++++.+++..+++..  ..+|++|+..+...+.+.+.|+..+.. ........+|. ++.+++++|
T Consensus       238 ~p~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~llve  317 (524)
T 2exr_A          238 APDMVRWIRVVYTEFDEFTQDAEWLVSQKNESSFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLE  317 (524)
T ss_dssp             CCSEEEEEEEEESCHHHHHHHHHHHHTSCTTSSCSEEEEEEEESSCCTTTSGGGSCSSTTSCCCGGGSCTTCCSEEEEEE
T ss_pred             cCCeeEEEEEEeCCHHHHHHHHHHHHHcCCcchhHhhchhhhhcchhhhhhhhhcccccccccchhcCCcccccEEEEEE
Confidence            99998999999999999999999998753  368999999998776666667654221 11111233542 456889999


Q ss_pred             Eeeec-CCCChHHHHHHHHHHHhhcccCCCeeeeccchhhhhhhhhhhhHHHHHhcccccCCccceecccCcccHHHHHH
Q 008291          363 LAKYI-NKDEKDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAR  441 (571)
Q Consensus       363 ~~~~~-~~~~~~~~~~~l~~ll~~l~~~~~~~~~~dv~y~~~l~~~~~~~~~~~~~~~W~~r~~~~d~~vP~s~i~~f~~  441 (571)
                      +.+|| ++++.++++++++++++.++..++..+..+..|.+|.+.....+-..+...+|.++++|.|++||.++++++++
T Consensus       318 ~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~W~~R~~~~~a~~~~~~Dv~VP~s~l~~~~~  397 (524)
T 2exr_A          318 LGLHYRDSDSNSTIDKRVERLIGRLRFNEGLRFEVDLPYVDFLLRVKRSEEIAKENGTWETPHPWLNLFVSKRDIGDFNR  397 (524)
T ss_dssp             EEEEECTTSCHHHHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTTTHHHHHHHHHTTCSSSCCCCEEEEEEHHHHHHHHH
T ss_pred             EEeecCCCCCHHHHHHHHHHHHHHHHhCCCeEeecccchhhhhhhhhhHHHHhhhhcccccCCCeeEEEECHHHHHHHHH
Confidence            98888 77688889999999999998887776667777888776553333345667789988899999999999999999


Q ss_pred             HHHHhhhcccCCccEEEecCCCCCCCCCCCccCCC-cceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCc
Q 008291          442 EVFGNILAETSNGPILIYPLNKSKWDNRTSVVIPE-EDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYCETARLGV  520 (571)
Q Consensus       442 ~v~~~il~~~~~g~i~~~p~~~~~~~~~~~~~~p~-~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~G~~~  520 (571)
                      ++.+.+++++|.|++++||....+|..+.+.++|+ +++++.++.+....+.+.+ ...+++.++++++.++|.+.|.++
T Consensus       398 ~v~~~~~gdgn~h~~i~~~~~~~~~~~r~~~~~~~g~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~G~~~  476 (524)
T 2exr_A          398 TVFKELVKNGVNGPMLVYPLLRSRWDDRTSVVIPEEGEIFYIVALLRFVPPCAKV-SSVEKMVAQNQEIVHWCVKNGIDY  476 (524)
T ss_dssp             HCCCCCTTTCCSSCEEEEEEEGGGSCTTSSCCCCSSCSEEEEEEECCCCCTTSCH-HHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHhCCCCcceEEEEeCCchHHHhHHHhhCCCCccEEEEEEEeccCCCcccc-hHHHHHHHHHHHHHHHHHHcCCcc
Confidence            98666678888899999999988898888889986 7788888877654332111 367788899999999999999999


Q ss_pred             eeccCCCCCHHHHHHhhchhHHHHHHhhhcCCCCCCCCCCCcccCCC
Q 008291          521 KQYLPHYTTQEQWRSHFGPQWEVFVQRKSTYDPLAILAPGQRIFQKA  567 (571)
Q Consensus       521 ~~Yl~~~~~~~~w~~~yG~~~~~l~~lK~~yDP~~ifnPG~~If~~~  567 (571)
                      +.|++|+.++++|++|||+.|+.|+++|++|||++||||||.||++.
T Consensus       477 ~~yl~~~~~~~~w~~~~G~~~~~m~~iK~~~DP~~iLnPG~~if~~~  523 (524)
T 2exr_A          477 KLYLPHYKSQEEWIRHFGNRWSRFVDRKAMFDPMAILSPGQKIFNRS  523 (524)
T ss_dssp             EESSCCCCSHHHHHHHHGGGHHHHHHHHHHHCTTCCBCGGGCSSCCC
T ss_pred             EEeecCCCCHHHHHHHhhhHHHHHHHHHhhcCchhhcCCCCccCCCC
Confidence            99999999999999999999999999999999999999999999875
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* Back     alignment and structure
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Back     alignment and structure
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A* Back     alignment and structure
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Back     alignment and structure
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A* Back     alignment and structure
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A* Back     alignment and structure
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa} Back     alignment and structure
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A* Back     alignment and structure
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* Back     alignment and structure
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Back     alignment and structure
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A* Back     alignment and structure
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1 Back     alignment and structure
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A* Back     alignment and structure
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A* Back     alignment and structure
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A* Back     alignment and structure
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus} Back     alignment and structure
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A* Back     alignment and structure
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A Back     alignment and structure
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* Back     alignment and structure
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} Back     alignment and structure
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A* Back     alignment and structure
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1 Back     alignment and structure
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes} Back     alignment and structure
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae} Back     alignment and structure
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A* Back     alignment and structure
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A* Back     alignment and structure
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus} Back     alignment and structure
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C* Back     alignment and structure
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A* Back     alignment and structure
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C* Back     alignment and structure
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B* Back     alignment and structure
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3 Back     alignment and structure
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Back     alignment and structure
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A* Back     alignment and structure
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 571
d1w1oa1289 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {M 1e-136
d1w1oa2206 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Ma 2e-36
d2i0ka2216 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibac 4e-17
d1e8ga2268 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fung 3e-11
d1wvfa2236 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cres 1e-09
d1f0xa2265 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Esche 2e-09
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Length = 289 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Cytokinin dehydrogenase 1
domain: Cytokinin dehydrogenase 1
species: Maize (Zea mays) [TaxId: 4577]

 Score =  395 bits (1016), Expect = e-136
 Identities = 113/292 (38%), Positives = 160/292 (54%), Gaps = 19/292 (6%)

Query: 288 PDMVKWIRVLYSDFATFARDQEYLISA--------EKTFDYIEGFVMVNRTGLLNNWRSS 339
           P   +W+R +Y+DFA F+ DQE L +              Y+EG V VN++   +   + 
Sbjct: 1   PARARWVRFVYTDFAAFSADQERLTAPRPGGGGASFGPMSYVEGSVFVNQSLATDLANTG 60

Query: 340 FDP---QDPVQASQFKSDGQTLFCLELAKYINK--DEKDLVNQEVESSLSVLNYIPSTLF 394
           F        + A   + +  T++ +E     +        V+QE+ S L  L+Y+    F
Sbjct: 61  FFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAF 120

Query: 395 LSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQSKIHDFAREVFGNILAETS-N 453
             +V+Y  FLDRVH  EV L   GLW VPHPWLN+F+P+S+I DF R VF  IL  T   
Sbjct: 121 QRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIV 180

Query: 454 GPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYC 513
           GP+++YPLNKS WD+  S   P EDVFY V+ L S+V      + L  +  QN+RIL +C
Sbjct: 181 GPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVA----PNDLARLQEQNRRILRFC 236

Query: 514 ETARLGVKQYLPHYTTQEQWRSHFG-PQWEVFVQRKSTYDPLAILAPGQRIF 564
           + A +  K YL  +T +  W  HFG  +W  FV+ K+ YDP  +L+PGQ IF
Sbjct: 237 DLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIF 288
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Length = 216 Back     information, alignment and structure
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Length = 268 Back     information, alignment and structure
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Length = 236 Back     information, alignment and structure
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 265 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query571
d1w1oa1289 Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId 100.0
d1w1oa2206 Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId 100.0
d1wvfa2236 Flavoprotein subunit of p-cresol methylhydroxylase 100.0
d1e8ga2268 Vanillyl-alcohol oxidase {Fungus (Penicillium simp 99.97
d2i0ka2216 Cholesterol oxidase {Brevibacterium sterolicum [Ta 99.97
d1f0xa2265 D-lactate dehydrogenase {Escherichia coli [TaxId: 99.94
d1hska1194 Uridine diphospho-N-Acetylenolpyruvylglucosamine r 99.91
d1uxya1198 Uridine diphospho-N-Acetylenolpyruvylglucosamine r 99.84
d1f0xa1294 D-lactate dehydrogenase {Escherichia coli [TaxId: 99.41
d1e8ga1287 Vanillyl-alcohol oxidase {Fungus (Penicillium simp 98.9
d1wvfa1279 Flavoprotein subunit of p-cresol methylhydroxylase 98.53
d1ffvc2177 Carbon monoxide (CO) dehydrogenase flavoprotein, N 96.15
d1t3qc2176 Quinoline 2-oxidoreductase medium subunit QorM {Ps 95.32
d1v97a6223 Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [ 95.22
d1n62c2177 Carbon monoxide (CO) dehydrogenase flavoprotein, N 94.93
d1jroa4167 Xanthine dehydrogenase chain A, domain 3 {Rhodobac 94.77
d1rm6b2216 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, 94.65
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Cytokinin dehydrogenase 1
domain: Cytokinin dehydrogenase 1
species: Maize (Zea mays) [TaxId: 4577]

Probab=100.00  E-value=2.2e-52  Score=410.73  Aligned_cols=274  Identities=41%  Similarity=0.782  Sum_probs=238.4

Q ss_pred             CCceEEEEEEeCCHHHHHHHHHHHHhcC--------CccccccceEEecccccccccccc-CCCCCcccccc--CCCCCC
Q 008291          288 PDMVKWIRVLYSDFATFARDQEYLISAE--------KTFDYIEGFVMVNRTGLLNNWRSS-FDPQDPVQASQ--FKSDGQ  356 (571)
Q Consensus       288 p~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~e~vd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~  356 (571)
                      |++++|+++.|.|++.|+++++.|++.+        ..++||||+++++.....|.|.++ |.+.+...+..  ....++
T Consensus         1 P~rvrw~rl~YsDf~~Ft~DQe~LIs~~~~~~~~~~~~fDYVEG~v~~~~~~~~~~~~s~~f~~~~~~~~~~~~~~~~g~   80 (289)
T d1w1oa1           1 PARARWVRFVYTDFAAFSADQERLTAPRPGGGGASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNAT   80 (289)
T ss_dssp             CSEEEEEEEEESCHHHHHHHHHHHHCBC------CBCSCSEEEEEEEEGGGHHHHHHTTSSSCHHHHHHHHHHHHHTTCS
T ss_pred             CCceEEEEEEEccHHHHHHHHHHHhccCccccccccCCcceEEEEEEecCCCccCCcccccCCccccchhhhhccccCCc
Confidence            6789999999999999999999999743        248999999999876665555554 43333322222  234678


Q ss_pred             eEEEEEEeeecCCCC--hHHHHHHHHHHHhhcccCCCeeeeccchhhhhhhhhhhhHHHHHhcccccCCccceecccCcc
Q 008291          357 TLFCLELAKYINKDE--KDLVNQEVESSLSVLNYIPSTLFLSEVSYIEFLDRVHVSEVKLRSKGLWEVPHPWLNLFIPQS  434 (571)
Q Consensus       357 ~~~~le~~~~~~~~~--~~~~~~~l~~ll~~l~~~~~~~~~~dv~y~~~l~~~~~~~~~~~~~~~W~~r~~~~d~~vP~s  434 (571)
                      ++||+|+++||+..+  .++++++++.+++.|+++++..+..|++|++|++|++..+..++++|+|++||||+|++||.+
T Consensus        81 ~lY~LE~ak~yd~~~~~~~~~d~~~~~lL~~L~~~~~~~f~~Dv~Y~dFL~Rv~~~E~~Lrs~GlW~vPHPWlNlfvP~s  160 (289)
T d1w1oa1          81 TVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRS  160 (289)
T ss_dssp             EEEEEEEEEEC-------CHHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTHHHHHHHHHHHTTCSSSCCCCEEEEEEGG
T ss_pred             eEEEEEEEEEecCCCCccchhhHHHHHHHhhcCCCCCcceeccCCHHHHHHHhhhhHHHHHhcCCCCCCCcceEEecchh
Confidence            999999999997544  456889999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhhhc-ccCCccEEEecCCCCCCCCCCCccCCCcceEEeeeecCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 008291          435 KIHDFAREVFGNILA-ETSNGPILIYPLNKSKWDNRTSVVIPEEDVFYLVAFLSSAVPSSKGTDGLEHILTQNKRILEYC  513 (571)
Q Consensus       435 ~i~~f~~~v~~~il~-~~~~g~i~~~p~~~~~~~~~~~~~~p~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~i~~~~  513 (571)
                      +|.+|+++|++.|+. ++..|||++||+++.+|+.+++.+.|++++||+|+++..+.+    ++.++++++||++|+++|
T Consensus       161 ~I~~F~~~Vf~~il~~~~~~GpiLvYP~~~~kwd~~~s~v~PdeevfylvalL~sa~~----~~~~~~l~~qN~~il~~c  236 (289)
T d1w1oa1         161 RIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVA----PNDLARLQEQNRRILRFC  236 (289)
T ss_dssp             GHHHHHHHHTTTTTTTSCCCSCEEEEEEEGGGSCTTSSCCCCSSSEEEEEEECCCC-------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccccCCCCeEEEEEccccccCCCccccCCCCCEEEEEEEecCCCC----cchHHHHHHHHHHHHHHH
Confidence            999999999998886 444699999999999999999999999999999999986542    357899999999999999


Q ss_pred             HHcCCCceeccCCCCCHHHHHHhhch-hHHHHHHhhhcCCCCCCCCCCCcccC
Q 008291          514 ETARLGVKQYLPHYTTQEQWRSHFGP-QWEVFVQRKSTYDPLAILAPGQRIFQ  565 (571)
Q Consensus       514 ~~~G~~~~~Yl~~~~~~~~w~~~yG~-~~~~l~~lK~~yDP~~ifnPG~~If~  565 (571)
                      .+.|++.|+|+++|.++++|+.|||+ +|++|+++|++|||++||+|||+||+
T Consensus       237 ~~aG~~~k~yl~~~~t~~dW~~HFG~~kW~~F~~~K~~yDP~~ILsPGQ~IF~  289 (289)
T d1w1oa1         237 DLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN  289 (289)
T ss_dssp             HHTTCCCEESSCCCSSHHHHHHHHCHHHHHHHHHHHHHHCTTCCBCGGGCSCC
T ss_pred             HHcCCcceEeCCCCCCHHHHHHHcCcchHHHHHHHHhhCCcccccCCCCccCC
Confidence            99999999999999999999999995 89999999999999999999999996
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Back     information, alignment and structure
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Back     information, alignment and structure
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Back     information, alignment and structure
>d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Back     information, alignment and structure
>d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]} Back     information, alignment and structure