Citrus Sinensis ID: 008433
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 565 | 2.2.26 [Sep-21-2011] | |||||||
| Q42560 | 898 | Aconitate hydratase 1 OS= | no | no | 0.992 | 0.624 | 0.884 | 0.0 | |
| Q6YZX6 | 898 | Putative aconitate hydrat | yes | no | 0.991 | 0.623 | 0.857 | 0.0 | |
| P49608 | 898 | Aconitate hydratase, cyto | N/A | no | 0.992 | 0.624 | 0.848 | 0.0 | |
| Q9SIB9 | 990 | Aconitate hydratase 2, mi | no | no | 0.991 | 0.565 | 0.846 | 0.0 | |
| O04916 | 616 | Aconitate hydratase, cyto | N/A | no | 0.991 | 0.909 | 0.844 | 0.0 | |
| Q42669 | 764 | Aconitate hydratase (Frag | N/A | no | 0.991 | 0.732 | 0.845 | 0.0 | |
| Q94A28 | 995 | Aconitate hydratase 3, mi | no | no | 0.991 | 0.562 | 0.778 | 0.0 | |
| Q90875 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.980 | 0.623 | 0.609 | 0.0 | |
| Q01059 | 889 | Cytoplasmic aconitate hyd | yes | no | 0.982 | 0.624 | 0.597 | 0.0 | |
| Q54X73 | 894 | Probable cytoplasmic acon | yes | no | 0.989 | 0.625 | 0.597 | 0.0 |
| >sp|Q42560|ACO1_ARATH Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2 | Back alignment and function desciption |
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Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/561 (88%), Positives = 529/561 (94%)
Query: 1 MIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHA 60
MIE+YLRANKMFVDYSEP+S+ VYSS LELNLE+V PCVSGPKRPHDRVPL EMKADWH+
Sbjct: 336 MIEAYLRANKMFVDYSEPESKTVYSSCLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHS 395
Query: 61 CLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAAL 120
CLDNRVGFKGFA+PKE QSK EFNF+GT AQLRHGDVVIAAITSCTNTSNPSVMLGAAL
Sbjct: 396 CLDNRVGFKGFAVPKEAQSKAVEFNFNGTTAQLRHGDVVIAAITSCTNTSNPSVMLGAAL 455
Query: 121 VAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSG 180
VAKKAC+LGLEVKPWIKTSLAPGSGVVTKYL SGLQKYLN LGF IVGYGCTTCIGNSG
Sbjct: 456 VAKKACDLGLEVKPWIKTSLAPGSGVVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSG 515
Query: 181 DIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFE 240
DI +AVA+AI +ND+VA+AVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFE
Sbjct: 516 DIHEAVASAIVDNDLVASAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFE 575
Query: 241 TEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSG 300
T+P+G GKDGK+IF RDIWPS++EVA VVQ SVLPDMFKATYEAITKGN MWNQLSV SG
Sbjct: 576 TQPIGTGKDGKQIFFRDIWPSNKEVAEVVQSSVLPDMFKATYEAITKGNSMWNQLSVASG 635
Query: 301 TLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSP 360
TLY WDPKSTYIHEPPYFK MTMSPPGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSP
Sbjct: 636 TLYEWDPKSTYIHEPPYFKGMTMSPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSP 695
Query: 361 AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKL 420
AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIR+VNK L GEVGPKT+HIPTGEKL
Sbjct: 696 AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRIVNKHLKGEVGPKTVHIPTGEKL 755
Query: 421 SVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVG 480
SVFDAAM+Y+NEG DT+ILAGAEYGSGSSRDWAAKGPMLLGVKAVI+KSFERIHRSNLVG
Sbjct: 756 SVFDAAMKYRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVG 815
Query: 481 MGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDT 540
MGIIPLCFK GEDAET GLTG E YTI+LP++VSEI+PGQDV VVT++GKSFTC +RFDT
Sbjct: 816 MGIIPLCFKAGEDAETLGLTGQELYTIELPNNVSEIKPGQDVTVVTNNGKSFTCTLRFDT 875
Query: 541 EVELAYFDHGGILQYVIRNLI 561
EVELAYFDHGGILQYVIRNLI
Sbjct: 876 EVELAYFDHGGILQYVIRNLI 896
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Catalyzes the isomerization of citrate to isocitrate via cis-aconitate. Arabidopsis thaliana (taxid: 3702) EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q6YZX6|ACOC_ORYSJ Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1 | Back alignment and function description |
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| >sp|P49608|ACOC_CUCMA Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SIB9|ACO2M_ARATH Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2 | Back alignment and function description |
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| >sp|O04916|ACOC_SOLTU Aconitate hydratase, cytoplasmic (Fragment) OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
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| >sp|Q42669|ACOC_CUCMC Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1 | Back alignment and function description |
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| >sp|Q94A28|ACO3M_ARATH Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q90875|ACOC_CHICK Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q01059|ACOC_RABIT Cytoplasmic aconitate hydratase OS=Oryctolagus cuniculus GN=ACO1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q54X73|ACOC_DICDI Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 565 | ||||||
| 285309965 | 900 | aconitate hydratase 1 [Citrus clementina | 1.0 | 0.627 | 1.0 | 0.0 | |
| 255579588 | 900 | aconitase, putative [Ricinus communis] g | 1.0 | 0.627 | 0.911 | 0.0 | |
| 225468576 | 900 | PREDICTED: aconitate hydratase 1-like [V | 0.998 | 0.626 | 0.898 | 0.0 | |
| 296084058 | 918 | unnamed protein product [Vitis vinifera] | 0.998 | 0.614 | 0.898 | 0.0 | |
| 224117236 | 899 | predicted protein [Populus trichocarpa] | 1.0 | 0.628 | 0.895 | 0.0 | |
| 224133986 | 899 | predicted protein [Populus trichocarpa] | 0.994 | 0.625 | 0.911 | 0.0 | |
| 449434116 | 900 | PREDICTED: aconitate hydratase 1-like [C | 1.0 | 0.627 | 0.883 | 0.0 | |
| 356538327 | 901 | PREDICTED: aconitate hydratase 1-like [G | 1.0 | 0.627 | 0.874 | 0.0 | |
| 34851120 | 902 | putative aconitase [Prunus avium] | 0.992 | 0.621 | 0.893 | 0.0 | |
| 357483921 | 901 | Aconitate hydratase [Medicago truncatula | 1.0 | 0.627 | 0.872 | 0.0 |
| >gi|285309965|emb|CBE71056.1| aconitate hydratase 1 [Citrus clementina] | Back alignment and taxonomy information |
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Score = 1179 bits (3049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/565 (100%), Positives = 565/565 (100%)
Query: 1 MIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHA 60
MIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHA
Sbjct: 336 MIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHA 395
Query: 61 CLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAAL 120
CLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAAL
Sbjct: 396 CLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAAL 455
Query: 121 VAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSG 180
VAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSG
Sbjct: 456 VAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSG 515
Query: 181 DIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFE 240
DIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFE
Sbjct: 516 DIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFE 575
Query: 241 TEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSG 300
TEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSG
Sbjct: 576 TEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSG 635
Query: 301 TLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSP 360
TLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSP
Sbjct: 636 TLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSP 695
Query: 361 AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKL 420
AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKL
Sbjct: 696 AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKL 755
Query: 421 SVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVG 480
SVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVG
Sbjct: 756 SVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVG 815
Query: 481 MGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDT 540
MGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDT
Sbjct: 816 MGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDT 875
Query: 541 EVELAYFDHGGILQYVIRNLINVRQ 565
EVELAYFDHGGILQYVIRNLINVRQ
Sbjct: 876 EVELAYFDHGGILQYVIRNLINVRQ 900
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Source: Citrus clementina Species: Citrus clementina Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255579588|ref|XP_002530635.1| aconitase, putative [Ricinus communis] gi|223529808|gb|EEF31743.1| aconitase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225468576|ref|XP_002263337.1| PREDICTED: aconitate hydratase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296084058|emb|CBI24446.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224117236|ref|XP_002331755.1| predicted protein [Populus trichocarpa] gi|222874452|gb|EEF11583.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224133986|ref|XP_002327728.1| predicted protein [Populus trichocarpa] gi|222836813|gb|EEE75206.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449434116|ref|XP_004134842.1| PREDICTED: aconitate hydratase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356538327|ref|XP_003537655.1| PREDICTED: aconitate hydratase 1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|34851120|gb|AAL13084.1| putative aconitase [Prunus avium] | Back alignment and taxonomy information |
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| >gi|357483921|ref|XP_003612247.1| Aconitate hydratase [Medicago truncatula] gi|355513582|gb|AES95205.1| Aconitate hydratase [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 565 | ||||||
| TAIR|locus:2125354 | 898 | ACO1 "AT4G35830" [Arabidopsis | 0.992 | 0.624 | 0.884 | 3.8e-275 | |
| TAIR|locus:2063354 | 990 | ACO3 "AT2G05710" [Arabidopsis | 0.991 | 0.565 | 0.846 | 1.6e-267 | |
| TAIR|locus:2116297 | 995 | ACO2 "AT4G26970" [Arabidopsis | 0.991 | 0.562 | 0.778 | 6.8e-246 | |
| UNIPROTKB|F1NY25 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.980 | 0.623 | 0.609 | 1.7e-187 | |
| UNIPROTKB|Q90875 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.980 | 0.623 | 0.609 | 1.7e-187 | |
| UNIPROTKB|I3LJW4 | 898 | ACO1 "Uncharacterized protein" | 0.982 | 0.618 | 0.604 | 2.8e-185 | |
| UNIPROTKB|D4ACL3 | 897 | Aco1 "Cytoplasmic aconitate hy | 0.982 | 0.618 | 0.599 | 1.5e-184 | |
| UNIPROTKB|Q01059 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.982 | 0.624 | 0.597 | 3.2e-184 | |
| DICTYBASE|DDB_G0279159 | 894 | aco1 "aconitate hydratase" [Di | 0.989 | 0.625 | 0.597 | 4.1e-184 | |
| UNIPROTKB|Q0VCU1 | 889 | ACO1 "Cytoplasmic aconitate hy | 0.982 | 0.624 | 0.593 | 1.8e-183 |
| TAIR|locus:2125354 ACO1 "AT4G35830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2645 (936.1 bits), Expect = 3.8e-275, P = 3.8e-275
Identities = 496/561 (88%), Positives = 529/561 (94%)
Query: 1 MIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHA 60
MIE+YLRANKMFVDYSEP+S+ VYSS LELNLE+V PCVSGPKRPHDRVPL EMKADWH+
Sbjct: 336 MIEAYLRANKMFVDYSEPESKTVYSSCLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHS 395
Query: 61 CLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAAL 120
CLDNRVGFKGFA+PKE QSK EFNF+GT AQLRHGDVVIAAITSCTNTSNPSVMLGAAL
Sbjct: 396 CLDNRVGFKGFAVPKEAQSKAVEFNFNGTTAQLRHGDVVIAAITSCTNTSNPSVMLGAAL 455
Query: 121 VAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSG 180
VAKKAC+LGLEVKPWIKTSLAPGSGVVTKYL SGLQKYLN LGF IVGYGCTTCIGNSG
Sbjct: 456 VAKKACDLGLEVKPWIKTSLAPGSGVVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSG 515
Query: 181 DIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFE 240
DI +AVA+AI +ND+VA+AVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFE
Sbjct: 516 DIHEAVASAIVDNDLVASAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFE 575
Query: 241 TEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSG 300
T+P+G GKDGK+IF RDIWPS++EVA VVQ SVLPDMFKATYEAITKGN MWNQLSV SG
Sbjct: 576 TQPIGTGKDGKQIFFRDIWPSNKEVAEVVQSSVLPDMFKATYEAITKGNSMWNQLSVASG 635
Query: 301 TLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSP 360
TLY WDPKSTYIHEPPYFK MTMSPPGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSP
Sbjct: 636 TLYEWDPKSTYIHEPPYFKGMTMSPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSP 695
Query: 361 AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKL 420
AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIR+VNK L GEVGPKT+HIPTGEKL
Sbjct: 696 AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRIVNKHLKGEVGPKTVHIPTGEKL 755
Query: 421 SVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVG 480
SVFDAAM+Y+NEG DT+ILAGAEYGSGSSRDWAAKGPMLLGVKAVI+KSFERIHRSNLVG
Sbjct: 756 SVFDAAMKYRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVG 815
Query: 481 MGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDT 540
MGIIPLCFK GEDAET GLTG E YTI+LP++VSEI+PGQDV VVT++GKSFTC +RFDT
Sbjct: 816 MGIIPLCFKAGEDAETLGLTGQELYTIELPNNVSEIKPGQDVTVVTNNGKSFTCTLRFDT 875
Query: 541 EVELAYFDHGGILQYVIRNLI 561
EVELAYFDHGGILQYVIRNLI
Sbjct: 876 EVELAYFDHGGILQYVIRNLI 896
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| TAIR|locus:2063354 ACO3 "AT2G05710" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2116297 ACO2 "AT4G26970" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NY25 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q90875 ACO1 "Cytoplasmic aconitate hydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LJW4 ACO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|D4ACL3 Aco1 "Cytoplasmic aconitate hydratase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q01059 ACO1 "Cytoplasmic aconitate hydratase" [Oryctolagus cuniculus (taxid:9986)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0279159 aco1 "aconitate hydratase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q0VCU1 ACO1 "Cytoplasmic aconitate hydratase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6YZX6 | ACOC_ORYSJ | 4, ., 2, ., 1, ., 3 | 0.8571 | 0.9911 | 0.6236 | yes | no |
| P63433 | ACON_STAAM | 4, ., 2, ., 1, ., 3 | 0.5177 | 0.9805 | 0.6148 | yes | no |
| Q6G9K9 | ACON_STAAS | 4, ., 2, ., 1, ., 3 | 0.5177 | 0.9805 | 0.6148 | yes | no |
| P09339 | ACON_BACSU | 4, ., 2, ., 1, ., 3 | 0.5239 | 0.9787 | 0.6083 | yes | no |
| Q90875 | ACOC_CHICK | 4, ., 2, ., 1, ., 3 | 0.6093 | 0.9805 | 0.6231 | yes | no |
| Q54X73 | ACOC_DICDI | 4, ., 2, ., 1, ., 3 | 0.5978 | 0.9893 | 0.6252 | yes | no |
| Q0VCU1 | ACOC_BOVIN | 4, ., 2, ., 1, ., 3 | 0.5939 | 0.9823 | 0.6242 | yes | no |
| Q68VV0 | ACON_RICTY | 4, ., 2, ., 1, ., 3 | 0.5141 | 0.9575 | 0.6161 | yes | no |
| Q92G90 | ACON_RICCN | 4, ., 2, ., 1, ., 3 | 0.5088 | 0.9575 | 0.6161 | yes | no |
| Q9RTN7 | ACON_DEIRA | 4, ., 2, ., 1, ., 3 | 0.5131 | 0.9876 | 0.6158 | yes | no |
| P99148 | ACON_STAAN | 4, ., 2, ., 1, ., 3 | 0.5177 | 0.9805 | 0.6148 | yes | no |
| P37032 | ACON_LEGPH | 4, ., 2, ., 1, ., 3 | 0.5238 | 0.9628 | 0.6105 | yes | no |
| P28271 | ACOC_MOUSE | 4, ., 2, ., 1, ., 3 | 0.5957 | 0.9823 | 0.6242 | yes | no |
| Q9I3F5 | ACON1_PSEAE | 4, ., 2, ., 1, ., 3 | 0.5051 | 0.9823 | 0.6098 | yes | no |
| Q6GH55 | ACON_STAAR | 4, ., 2, ., 1, ., 3 | 0.5195 | 0.9805 | 0.6148 | yes | no |
| Q42669 | ACOC_CUCMC | 4, ., 2, ., 1, ., 3 | 0.8450 | 0.9911 | 0.7329 | N/A | no |
| Q5HPJ0 | ACON_STAEQ | 4, ., 2, ., 1, ., 3 | 0.5265 | 0.9805 | 0.6148 | yes | no |
| Q01059 | ACOC_RABIT | 4, ., 2, ., 1, ., 3 | 0.5974 | 0.9823 | 0.6242 | yes | no |
| Q1RKD5 | ACON_RICBR | 4, ., 2, ., 1, ., 3 | 0.5070 | 0.9699 | 0.6192 | yes | no |
| Q4UK20 | ACON_RICFE | 4, ., 2, ., 1, ., 3 | 0.5124 | 0.9575 | 0.6161 | yes | no |
| P63434 | ACON_STAAW | 4, ., 2, ., 1, ., 3 | 0.5177 | 0.9805 | 0.6148 | yes | no |
| Q9ZCF4 | ACON_RICPR | 4, ., 2, ., 1, ., 3 | 0.5132 | 0.9522 | 0.6127 | yes | no |
| P21399 | ACOC_HUMAN | 4, ., 2, ., 1, ., 3 | 0.5885 | 0.9823 | 0.6242 | yes | no |
| Q8CPC2 | ACON_STAES | 4, ., 2, ., 1, ., 3 | 0.5265 | 0.9805 | 0.6148 | yes | no |
| Q63270 | ACOC_RAT | 4, ., 2, ., 1, ., 3 | 0.5921 | 0.9823 | 0.6242 | yes | no |
| P49608 | ACOC_CUCMA | 4, ., 2, ., 1, ., 3 | 0.8484 | 0.9929 | 0.6247 | N/A | no |
| Q23500 | ACOC_CAEEL | 4, ., 2, ., 1, ., 3 | 0.5757 | 0.9840 | 0.6268 | yes | no |
| O04916 | ACOC_SOLTU | 4, ., 2, ., 1, ., 3 | 0.8446 | 0.9911 | 0.9090 | N/A | no |
| Q5HG69 | ACON_STAAC | 4, ., 2, ., 1, ., 3 | 0.5177 | 0.9805 | 0.6148 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.2.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | eugene3.01810009 | aconitate hydratase 1 (EC-4.2.1.3) (899 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | estExt_Genewise1_v1.C_LG_XVI2794 | • | • | • | 0.941 | ||||||
 | estExt_Genewise1_v1.C_LG_XIV2957 | • | • | • | 0.941 | ||||||
 | estExt_fgenesh4_pm.C_1480010 | • | • | • | 0.916 | ||||||
 | estExt_fgenesh4_pg.C_LG_XVI0781 | • | • | • | 0.908 | ||||||
 | eugene3.00280188 | • | • | • | 0.908 | ||||||
 | estExt_fgenesh4_pg.C_660173 | • | • | • | 0.902 | ||||||
 | estExt_fgenesh4_pm.C_LG_IX0030 | • | • | • | 0.902 | ||||||
 | eugene3.00050378 | • | • | • | 0.902 | ||||||
 | estExt_fgenesh4_pg.C_LG_VII0812 | • | • | • | 0.902 | ||||||
 | eugene3.00070229 | • | 0.900 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 565 | |||
| PLN00070 | 936 | PLN00070, PLN00070, aconitate hydratase | 0.0 | |
| PTZ00092 | 898 | PTZ00092, PTZ00092, aconitate hydratase-like prote | 0.0 | |
| TIGR01341 | 876 | TIGR01341, aconitase_1, aconitate hydratase 1 | 0.0 | |
| PRK09277 | 888 | PRK09277, PRK09277, aconitate hydratase; Validated | 0.0 | |
| PRK12881 | 889 | PRK12881, acnA, aconitate hydratase; Provisional | 0.0 | |
| COG1048 | 861 | COG1048, AcnA, Aconitase A [Energy production and | 0.0 | |
| TIGR02333 | 858 | TIGR02333, 2met_isocit_dHY, 2-methylisocitrate deh | 1e-154 | |
| cd01580 | 171 | cd01580, AcnA_IRP_Swivel, Aconitase A swivel domai | 1e-114 | |
| cd01586 | 404 | cd01586, AcnA_IRP, Aconitase A catalytic domain | 1e-108 | |
| pfam00694 | 131 | pfam00694, Aconitase_C, Aconitase C-terminal domai | 1e-58 | |
| pfam00330 | 464 | pfam00330, Aconitase, Aconitase family (aconitate | 7e-53 | |
| TIGR01340 | 745 | TIGR01340, aconitase_mito, aconitate hydratase, mi | 8e-31 | |
| TIGR01342 | 658 | TIGR01342, acon_putative, aconitate hydratase, put | 1e-29 | |
| cd01351 | 389 | cd01351, Aconitase, Aconitase catalytic domain; Ac | 6e-28 | |
| PRK07229 | 646 | PRK07229, PRK07229, aconitate hydratase; Validated | 2e-24 | |
| cd01579 | 121 | cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-lik | 3e-21 | |
| cd00404 | 88 | cd00404, Aconitase_swivel, Aconitase swivel domain | 1e-19 | |
| cd01578 | 149 | cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconi | 4e-16 | |
| cd01584 | 412 | cd01584, AcnA_Mitochondrial, Aconitase catalyzes t | 6e-15 | |
| cd01577 | 91 | cd01577, IPMI_Swivel, Aconatase-like swivel domain | 5e-12 | |
| COG0066 | 191 | COG0066, LeuD, 3-isopropylmalate dehydratase small | 3e-10 | |
| cd01583 | 382 | cd01583, IPMI, 3-isopropylmalate dehydratase catal | 4e-10 | |
| TIGR00170 | 465 | TIGR00170, leuC, 3-isopropylmalate dehydratase, la | 1e-09 | |
| TIGR02087 | 154 | TIGR02087, LEUD_arch, 3-isopropylmalate dehydratas | 1e-09 | |
| PRK07229 | 646 | PRK07229, PRK07229, aconitate hydratase; Validated | 4e-09 | |
| PRK14023 | 166 | PRK14023, PRK14023, homoaconitate hydratase small | 5e-09 | |
| cd01585 | 380 | cd01585, AcnA_Bact, Aconitase catalyzes the revers | 3e-08 | |
| COG0065 | 423 | COG0065, LeuC, 3-isopropylmalate dehydratase large | 2e-07 | |
| PRK00439 | 163 | PRK00439, leuD, 3-isopropylmalate dehydratase smal | 2e-07 | |
| PRK12466 | 471 | PRK12466, PRK12466, isopropylmalate isomerase larg | 9e-07 | |
| cd01582 | 363 | cd01582, Homoaconitase, Homoaconitase and other un | 5e-06 | |
| PRK01641 | 200 | PRK01641, leuD, isopropylmalate isomerase small su | 2e-05 | |
| PRK05478 | 466 | PRK05478, PRK05478, isopropylmalate isomerase larg | 3e-05 | |
| TIGR00139 | 712 | TIGR00139, h_aconitase, homoaconitase | 4e-05 | |
| TIGR02083 | 419 | TIGR02083, LEU2, 3-isopropylmalate dehydratase, la | 5e-05 | |
| TIGR02086 | 412 | TIGR02086, IPMI_arch, 3-isopropylmalate dehydratas | 2e-04 | |
| TIGR02084 | 156 | TIGR02084, leud, 3-isopropylmalate dehydratase, sm | 3e-04 | |
| PLN00072 | 246 | PLN00072, PLN00072, 3-isopropylmalate isomerase/de | 0.002 |
| >gnl|CDD|215047 PLN00070, PLN00070, aconitate hydratase | Back alignment and domain information |
|---|
Score = 1255 bits (3250), Expect = 0.0
Identities = 500/562 (88%), Positives = 536/562 (95%)
Query: 1 MIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHA 60
MIE+YLRANKMFVDY+EPQ ERVYSSYLEL+LE+V PC+SGPKRPHDRVPL EMKADWH+
Sbjct: 374 MIEAYLRANKMFVDYNEPQQERVYSSYLELDLEDVEPCISGPKRPHDRVPLKEMKADWHS 433
Query: 61 CLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAAL 120
CLDN+VGFKGFA+PKE QSKVA+F+FHG PA+LRHG VVIAAITSCTNTSNPSVMLGA L
Sbjct: 434 CLDNKVGFKGFAVPKEAQSKVAKFSFHGQPAELRHGSVVIAAITSCTNTSNPSVMLGAGL 493
Query: 121 VAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSG 180
VAKKACELGLEVKPWIKTSLAPGSGVVTKYL SGLQKYLN GFHIVGYGCTTCIGNSG
Sbjct: 494 VAKKACELGLEVKPWIKTSLAPGSGVVTKYLLKSGLQKYLNQQGFHIVGYGCTTCIGNSG 553
Query: 181 DIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFE 240
++D++VA+AITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAG+V+IDFE
Sbjct: 554 ELDESVASAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFE 613
Query: 241 TEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSG 300
EP+G GKDGK +F RDIWPS+EEVA VVQ SVLPDMFK+TYEAITKGNPMWNQLSVPSG
Sbjct: 614 KEPIGTGKDGKDVFFRDIWPSNEEVAEVVQSSVLPDMFKSTYEAITKGNPMWNQLSVPSG 673
Query: 301 TLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSP 360
TLY+WDPKSTYIHEPPYFK+MTMSPPGPHGVK AYCLLNFGDSITTDHISPAGSIHKDSP
Sbjct: 674 TLYSWDPKSTYIHEPPYFKNMTMSPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSP 733
Query: 361 AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKL 420
AAKYLMERGVDR+DFNSYGSRRGNDEIMARGTFANIR+VNKLL GEVGPKT+HIPTGEKL
Sbjct: 734 AAKYLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLLKGEVGPKTVHIPTGEKL 793
Query: 421 SVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVG 480
SVFDAAM+YK+EGHDT+ILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVG
Sbjct: 794 SVFDAAMKYKSEGHDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVG 853
Query: 481 MGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDT 540
MGIIPLCFK GEDA+T GLTGHERYTIDLPS++SEI+PGQDV V TD+GKSFTC +RFDT
Sbjct: 854 MGIIPLCFKSGEDADTLGLTGHERYTIDLPSNISEIKPGQDVTVTTDNGKSFTCTLRFDT 913
Query: 541 EVELAYFDHGGILQYVIRNLIN 562
EVELAYFDHGGIL YVIRNLI
Sbjct: 914 EVELAYFDHGGILPYVIRNLIK 935
|
Length = 936 |
| >gnl|CDD|240263 PTZ00092, PTZ00092, aconitate hydratase-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233363 TIGR01341, aconitase_1, aconitate hydratase 1 | Back alignment and domain information |
|---|
| >gnl|CDD|236445 PRK09277, PRK09277, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237246 PRK12881, acnA, aconitate hydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223977 COG1048, AcnA, Aconitase A [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|131386 TIGR02333, 2met_isocit_dHY, 2-methylisocitrate dehydratase, Fe/S-dependent | Back alignment and domain information |
|---|
| >gnl|CDD|238812 cd01580, AcnA_IRP_Swivel, Aconitase A swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|153136 cd01586, AcnA_IRP, Aconitase A catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|201399 pfam00694, Aconitase_C, Aconitase C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|215861 pfam00330, Aconitase, Aconitase family (aconitate hydratase) | Back alignment and domain information |
|---|
| >gnl|CDD|233362 TIGR01340, aconitase_mito, aconitate hydratase, mitochondrial | Back alignment and domain information |
|---|
| >gnl|CDD|130409 TIGR01342, acon_putative, aconitate hydratase, putative, Aquifex type | Back alignment and domain information |
|---|
| >gnl|CDD|153129 cd01351, Aconitase, Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|238811 cd01579, AcnA_Bact_Swivel, Bacterial Aconitase-like swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|238236 cd00404, Aconitase_swivel, Aconitase swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|238810 cd01578, AcnA_Mitochon_Swivel, Mitochondrial aconitase A swivel domain | Back alignment and domain information |
|---|
| >gnl|CDD|153134 cd01584, AcnA_Mitochondrial, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|238809 cd01577, IPMI_Swivel, Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins | Back alignment and domain information |
|---|
| >gnl|CDD|223144 COG0066, LeuD, 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|153133 cd01583, IPMI, 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate | Back alignment and domain information |
|---|
| >gnl|CDD|232854 TIGR00170, leuC, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233716 TIGR02087, LEUD_arch, 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >gnl|CDD|235974 PRK07229, PRK07229, aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|184460 PRK14023, PRK14023, homoaconitate hydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|153135 cd01585, AcnA_Bact, Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >gnl|CDD|223143 COG0065, LeuC, 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|234762 PRK00439, leuD, 3-isopropylmalate dehydratase small subunit; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|183543 PRK12466, PRK12466, isopropylmalate isomerase large subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|153132 cd01582, Homoaconitase, Homoaconitase and other uncharacterized proteins of the Aconitase family | Back alignment and domain information |
|---|
| >gnl|CDD|179314 PRK01641, leuD, isopropylmalate isomerase small subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235490 PRK05478, PRK05478, isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|129245 TIGR00139, h_aconitase, homoaconitase | Back alignment and domain information |
|---|
| >gnl|CDD|131138 TIGR02083, LEU2, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233715 TIGR02086, IPMI_arch, 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|131139 TIGR02084, leud, 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >gnl|CDD|177701 PLN00072, PLN00072, 3-isopropylmalate isomerase/dehydratase small subunit; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 565 | |||
| KOG0452 | 892 | consensus RNA-binding translational regulator IRP | 100.0 | |
| PLN00070 | 936 | aconitate hydratase | 100.0 | |
| PTZ00092 | 898 | aconitate hydratase-like protein; Provisional | 100.0 | |
| TIGR01341 | 876 | aconitase_1 aconitate hydratase 1. This model repr | 100.0 | |
| PRK12881 | 889 | acnA aconitate hydratase; Provisional | 100.0 | |
| PRK09277 | 888 | aconitate hydratase; Validated | 100.0 | |
| TIGR02333 | 858 | 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe | 100.0 | |
| COG1048 | 861 | AcnA Aconitase A [Energy production and conversion | 100.0 | |
| TIGR01340 | 745 | aconitase_mito aconitate hydratase, mitochondrial. | 100.0 | |
| PRK07229 | 646 | aconitate hydratase; Validated | 100.0 | |
| TIGR01342 | 658 | acon_putative aconitate hydratase, putative, Aquif | 100.0 | |
| PRK11413 | 751 | putative hydratase; Provisional | 100.0 | |
| TIGR00139 | 712 | h_aconitase homoaconitase. Homoaconitase, aconitas | 100.0 | |
| KOG0453 | 778 | consensus Aconitase/homoaconitase (aconitase super | 100.0 | |
| cd01580 | 171 | AcnA_IRP_Swivel Aconitase A swivel domain. This is | 100.0 | |
| PRK12466 | 471 | isopropylmalate isomerase large subunit; Provision | 100.0 | |
| PRK05478 | 466 | isopropylmalate isomerase large subunit; Validated | 100.0 | |
| TIGR00170 | 465 | leuC 3-isopropylmalate dehydratase, large subunit. | 100.0 | |
| cd01583 | 382 | IPMI 3-isopropylmalate dehydratase catalyzes the i | 100.0 | |
| cd01585 | 380 | AcnA_Bact Aconitase catalyzes the reversible isome | 100.0 | |
| cd01586 | 404 | AcnA_IRP Aconitase A catalytic domain. Aconitase A | 100.0 | |
| TIGR01343 | 412 | hacA_fam homoaconitate hydratase family protein. T | 100.0 | |
| PRK00402 | 418 | 3-isopropylmalate dehydratase large subunit; Revie | 100.0 | |
| TIGR02086 | 412 | IPMI_arch 3-isopropylmalate dehydratase, large sub | 100.0 | |
| PF00330 | 465 | Aconitase: Aconitase family (aconitate hydratase); | 100.0 | |
| cd01584 | 412 | AcnA_Mitochondrial Aconitase catalyzes the reversi | 100.0 | |
| TIGR02083 | 419 | LEU2 3-isopropylmalate dehydratase, large subunit. | 100.0 | |
| COG0065 | 423 | LeuC 3-isopropylmalate dehydratase large subunit [ | 100.0 | |
| cd01581 | 436 | AcnB Aconitate hydratase B catalyses the formation | 100.0 | |
| cd01582 | 363 | Homoaconitase Homoaconitase and other uncharacteri | 100.0 | |
| cd01351 | 389 | Aconitase Aconitase catalytic domain; Aconitase ca | 100.0 | |
| PRK09238 | 835 | bifunctional aconitate hydratase 2/2-methylisocitr | 100.0 | |
| PLN00094 | 938 | aconitate hydratase 2; Provisional | 100.0 | |
| TIGR00117 | 844 | acnB aconitate hydratase 2. Aconitate hydratase (a | 100.0 | |
| KOG0454 | 502 | consensus 3-isopropylmalate dehydratase (aconitase | 100.0 | |
| cd01578 | 149 | AcnA_Mitochon_Swivel Mitochondrial aconitase A swi | 100.0 | |
| PRK00439 | 163 | leuD 3-isopropylmalate dehydratase small subunit; | 100.0 | |
| TIGR02084 | 156 | leud 3-isopropylmalate dehydratase, small subunit. | 100.0 | |
| PRK14023 | 166 | homoaconitate hydratase small subunit; Provisional | 100.0 | |
| TIGR02087 | 154 | LEUD_arch 3-isopropylmalate dehydratase, small sub | 100.0 | |
| PLN00072 | 246 | 3-isopropylmalate isomerase/dehydratase small subu | 100.0 | |
| COG0066 | 191 | LeuD 3-isopropylmalate dehydratase small subunit [ | 100.0 | |
| PF00694 | 131 | Aconitase_C: Aconitase C-terminal domain CAUTION: | 100.0 | |
| cd01579 | 121 | AcnA_Bact_Swivel Bacterial Aconitase-like swivel d | 100.0 | |
| TIGR00171 | 188 | leuD 3-isopropylmalate dehydratase, small subunit. | 99.97 | |
| PRK01641 | 200 | leuD isopropylmalate isomerase small subunit; Prov | 99.97 | |
| cd00404 | 88 | Aconitase_swivel Aconitase swivel domain. Aconitas | 99.96 | |
| cd01577 | 91 | IPMI_Swivel Aconatase-like swivel domain of 3-isop | 99.96 | |
| PRK09238 | 835 | bifunctional aconitate hydratase 2/2-methylisocitr | 99.96 | |
| cd01674 | 129 | Homoaconitase_Swivel Homoaconitase swivel domain. | 99.95 | |
| COG1049 | 852 | AcnB Aconitase B [Energy production and conversion | 99.93 | |
| TIGR00117 | 844 | acnB aconitate hydratase 2. Aconitate hydratase (a | 99.91 | |
| cd01576 | 131 | AcnB_Swivel Aconitase B swivel domain. Aconitate h | 99.91 | |
| PLN00094 | 938 | aconitate hydratase 2; Provisional | 99.82 | |
| PRK14812 | 119 | hypothetical protein; Provisional | 99.79 | |
| PF06434 | 204 | Aconitase_2_N: Aconitate hydratase 2 N-terminus; I | 98.78 | |
| KOG0454 | 502 | consensus 3-isopropylmalate dehydratase (aconitase | 98.14 | |
| COG1049 | 852 | AcnB Aconitase B [Energy production and conversion | 97.08 | |
| PF04412 | 400 | DUF521: Protein of unknown function (DUF521); Inte | 95.94 | |
| COG1679 | 403 | Predicted aconitase [General function prediction o | 93.46 | |
| cd01355 | 389 | AcnX Putative Aconitase X catalytic domain. Putati | 90.86 |
| >KOG0452 consensus RNA-binding translational regulator IRP (aconitase superfamily) [RNA processing and modification; Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-168 Score=1320.20 Aligned_cols=557 Identities=72% Similarity=1.201 Sum_probs=547.9
Q ss_pred HHHHHHHcCCCCCCCCCCCCCcccEEEEEEcCCcccccccCCCCCCcccCCcccchhhhhhcccccCCCccCcccccccc
Q 008433 2 IESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSKV 81 (565)
Q Consensus 2 v~~yl~~~g~~~~~~~~d~~a~Y~~vieiDLs~veP~iA~P~~P~~~~~v~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (565)
+++|||+.++|++|..++.++.|++++++||++|+|+|+||+||+|++++++|+++|..||.++++++||.++++.|...
T Consensus 336 i~~yLka~~~f~~~~~~~q~p~yt~~l~l~L~~vvp~vSGPKRPhDrV~v~dmk~Df~scL~~~vgFKgFai~~e~q~~~ 415 (892)
T KOG0452|consen 336 IEKYLKAVKMFRDYNDPSQDPVYTQVLELDLGTVVPSVSGPKRPHDRVAVSDMKADFHSCLDSKVGFKGFAIAPEAQSKS 415 (892)
T ss_pred HHHHHHHHhhhhhccCcccCcceeeEEEEecCceeeccCCCCCCccccchhhHHHHHHHhhcCcccccccccChhHhhce
Confidence 78999999999999878889999999999999999999999999999999999999999999999999999999999888
Q ss_pred ceeecCCCcccccCCCeEEEEEecCCCCCchHHHHHHHHHHHHHHhcCCccCCCeeEEEEcCCHHHHHHHHHcChHHHHH
Q 008433 82 AEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLN 161 (565)
Q Consensus 82 ~~~~~~g~~~~~~~g~v~ia~IgSCTN~s~~dl~~aA~llak~A~~~G~kv~~~vk~~v~PgS~~V~~~l~~~Gl~~~l~ 161 (565)
..+.|+|.+.+|+||+|+||+|+||||+|||++|++|+||||||+++|++|+||+|||++|||.+|+.||.++|++++|+
T Consensus 416 v~f~~~g~~~~l~HGsVVIAAitSCTNtsNPSVMlgAgLlAKkAv~~GL~v~PyikTSLsPGSgvVt~YL~~SGv~pyL~ 495 (892)
T KOG0452|consen 416 VEFQYDGTTAKLKHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVELGLNVKPYIKTSLSPGSGVVTKYLSESGVLPYLE 495 (892)
T ss_pred EEEEECCeeeEeccCcEEEEEEecccCCCCcHHhhhhhHHHHHHHhcCceecceeecccCCCCchhhhhhhhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcEEeccCcccccCCCCCCchHHHhhhccCCeEEeeeeeccccCCCCCCCccCCceecCHHHHHHHHHhCCccCCCCC
Q 008433 162 HLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFET 241 (565)
Q Consensus 162 ~aG~~i~~~gCg~CiG~~~~~~~~~~~~i~~~~~~~~sv~s~NRNF~gR~g~~~~~~yLaSP~lvaA~AlaG~i~~d~~t 241 (565)
++||.|+||||++||||+|++.+++.++|++|++++++|+|+|||||||+||.+++||||||+||+||||||++++||+|
T Consensus 496 klGF~IvGYGC~TCiGNsgpl~e~V~~ai~~ndlV~~gvLSGNrNFEGRvhp~tRANYLASPpLvvaYaiaGtV~IDfe~ 575 (892)
T KOG0452|consen 496 KLGFDIVGYGCMTCIGNSGPLDEAVVNAIEQNDLVAAGVLSGNRNFEGRVHPNTRANYLASPPLVVAYAIAGTVNIDFET 575 (892)
T ss_pred hcCceeeccccceeccCCCCCCHHHHHhhhcCCeEEEEEeecCCCccccccccchhhhccCchHHhhhhhcceeecceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCcccccccCCCChHHHHHHhhhccCchhHHhhhhhccCCCccccccCCCCCCccccCCCcccccCCCCCCCC
Q 008433 242 EPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKDM 321 (565)
Q Consensus 242 ~pl~~~~~g~~v~l~d~~P~~~ei~~~~~~~~~~~~~~~~y~~i~~g~~~w~~~~~~~~~~~~wd~~st~i~~~P~~~~~ 321 (565)
+|+|++++|+.|||+||||+++||++++++++.|+||++.|+.|..|++.||.|..|++.+|+||++||||++||||++|
T Consensus 576 eplg~~~~Gk~vfl~DIWPtr~Ev~~ve~~~Vip~mFk~~y~~I~~gn~~Wn~L~~p~~~Ly~Wd~~STYI~~ppfF~~m 655 (892)
T KOG0452|consen 576 EPLGVDPDGKNVFLRDIWPTREEVAEVEEEHVIPSMFKEVYEKIELGNPDWNQLEVPSSKLYPWDPKSTYIKEPPFFEGM 655 (892)
T ss_pred cccccCCCCCeEEEeecCCCHHHHHHHHHhcccHHHHHHHHHHHhhcChhhhhccCCccceeccCCCCceecCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccceEEeecCCCcccccccCCCCCCCCChhhhHHHHcCCCCcCCccccCCCCchhhhhcccccccchhcc
Q 008433 322 TMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNK 401 (565)
Q Consensus 322 ~~~~~~~~~i~~~~vl~~~gD~itTDhIsPaG~i~~~s~a~~~L~~~g~~~~~fn~ygsrR~N~evm~rg~f~n~r~~n~ 401 (565)
+..++.+++|++++||+.+||+||||||||||+|.++||||+||..||++|+|||||||||||+++|+||||+|||+.|+
T Consensus 656 T~~~p~~~~i~~A~~LLnlGDSvTTDHISPAGsI~r~SpAAr~L~~Rg~tprdFNsYGsRRGND~vMaRGTFANIrlvNk 735 (892)
T KOG0452|consen 656 TRDLPGPQSIEDAYCLLNLGDSVTTDHISPAGSIARTSPAARYLTERGLTPRDFNSYGSRRGNDAVMARGTFANIRLVNK 735 (892)
T ss_pred ccCCCCcccccceeEEEeccCcccccccCCCccccccCHHHHHHHhcCCChhhccccccccCchhhhhcccchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccCCceeccCCCccchhhhHHHHHHhcCCceEEEecCCcCCCCchhhhhhhhhhcCceEEEecchHHHHhhhhccC
Q 008433 402 LLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGM 481 (565)
Q Consensus 402 ~~~~~~g~~t~~~p~g~~~~i~~~a~~y~~~g~~~iIVAG~nyG~GSSRE~AA~~~~~LGv~AVIA~SFarIh~~Nlin~ 481 (565)
++. ++||.|+|+|+||.++|||+|++|+++|.+.||+||+.||+|||||||||+|.+||||||||+||+||||+||++|
T Consensus 736 l~~-k~gP~TvHiPsge~ldvFdAA~~Y~~~g~p~iilaGkeYGsGsSRDWAAKGP~LlGvKAViaeS~ErIHrsnLvGm 814 (892)
T KOG0452|consen 736 LLS-KVGPKTVHIPSGEELDVFDAAERYKSEGIPLIILAGKEYGSGSSRDWAAKGPFLLGVKAVIAESYERIHRSNLVGM 814 (892)
T ss_pred Hhc-ccCCceEecCCCCeecHhhHHHHHHhcCCceEEEeccccCCCCccchhhcCchhhhhHHHHHHHHHHHHhhccccc
Confidence 998 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceecCCCccccccCCCCCeEEEEEcCCCccccCCCceEEEEcCCCeEEEEEeeCCCHHHHHHHHhcCHHHHHHHHhh
Q 008433 482 GIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLI 561 (565)
Q Consensus 482 GiLPL~f~~~~~~~~l~l~~~e~~~i~l~~~~~~~~~g~~i~v~~~~g~~~~~~~~~~t~~e~~~~~aGGll~yv~~~~~ 561 (565)
||+||+|..++++|+|++.|.|.++|.+|+. .++||+.|+|.+.+|+.|.+++++||+.|+.|+++||||||+.|++.
T Consensus 815 GIiPl~f~~Ge~AdtLgLtG~E~yti~lP~~--~lkPgq~i~v~~dtGk~F~~~~rFdteVeltyy~~GGiL~y~iRk~~ 892 (892)
T KOG0452|consen 815 GIIPLQFLPGEDADTLGLTGRERYTIHLPEN--ILKPGQDITVTTDTGKVFVCTLRFDTEVELTYYKNGGILNYMIRKLS 892 (892)
T ss_pred eeeeeeecCCCChhhcCcccceeEEEECCcc--cCCCCceEEEEecCCcEEEEEEEecceEEEEEEecCCcHHHHHhhcC
Confidence 9999999999999999999999999999873 39999999998888999999999999999999999999999999863
|
|
| >PLN00070 aconitate hydratase | Back alignment and domain information |
|---|
| >PTZ00092 aconitate hydratase-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01341 aconitase_1 aconitate hydratase 1 | Back alignment and domain information |
|---|
| >PRK12881 acnA aconitate hydratase; Provisional | Back alignment and domain information |
|---|
| >PRK09277 aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >TIGR02333 2met_isocit_dHY 2-methylisocitrate dehydratase, Fe/S-dependent | Back alignment and domain information |
|---|
| >COG1048 AcnA Aconitase A [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR01340 aconitase_mito aconitate hydratase, mitochondrial | Back alignment and domain information |
|---|
| >PRK07229 aconitate hydratase; Validated | Back alignment and domain information |
|---|
| >TIGR01342 acon_putative aconitate hydratase, putative, Aquifex type | Back alignment and domain information |
|---|
| >PRK11413 putative hydratase; Provisional | Back alignment and domain information |
|---|
| >TIGR00139 h_aconitase homoaconitase | Back alignment and domain information |
|---|
| >KOG0453 consensus Aconitase/homoaconitase (aconitase superfamily) [Energy production and conversion; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01580 AcnA_IRP_Swivel Aconitase A swivel domain | Back alignment and domain information |
|---|
| >PRK12466 isopropylmalate isomerase large subunit; Provisional | Back alignment and domain information |
|---|
| >PRK05478 isopropylmalate isomerase large subunit; Validated | Back alignment and domain information |
|---|
| >TIGR00170 leuC 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >cd01583 IPMI 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate | Back alignment and domain information |
|---|
| >cd01585 AcnA_Bact Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >cd01586 AcnA_IRP Aconitase A catalytic domain | Back alignment and domain information |
|---|
| >TIGR01343 hacA_fam homoaconitate hydratase family protein | Back alignment and domain information |
|---|
| >PRK00402 3-isopropylmalate dehydratase large subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR02086 IPMI_arch 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >PF00330 Aconitase: Aconitase family (aconitate hydratase); InterPro: IPR001030 Aconitase (aconitate hydratase; 4 | Back alignment and domain information |
|---|
| >cd01584 AcnA_Mitochondrial Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >TIGR02083 LEU2 3-isopropylmalate dehydratase, large subunit | Back alignment and domain information |
|---|
| >COG0065 LeuC 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01581 AcnB Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >cd01582 Homoaconitase Homoaconitase and other uncharacterized proteins of the Aconitase family | Back alignment and domain information |
|---|
| >cd01351 Aconitase Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle | Back alignment and domain information |
|---|
| >PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >PLN00094 aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >TIGR00117 acnB aconitate hydratase 2 | Back alignment and domain information |
|---|
| >KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd01578 AcnA_Mitochon_Swivel Mitochondrial aconitase A swivel domain | Back alignment and domain information |
|---|
| >PRK00439 leuD 3-isopropylmalate dehydratase small subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR02084 leud 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PRK14023 homoaconitate hydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02087 LEUD_arch 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PLN00072 3-isopropylmalate isomerase/dehydratase small subunit; Provisional | Back alignment and domain information |
|---|
| >COG0066 LeuD 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF00694 Aconitase_C: Aconitase C-terminal domain CAUTION: The Prosite patterns do not match this domain | Back alignment and domain information |
|---|
| >cd01579 AcnA_Bact_Swivel Bacterial Aconitase-like swivel domain | Back alignment and domain information |
|---|
| >TIGR00171 leuD 3-isopropylmalate dehydratase, small subunit | Back alignment and domain information |
|---|
| >PRK01641 leuD isopropylmalate isomerase small subunit; Provisional | Back alignment and domain information |
|---|
| >cd00404 Aconitase_swivel Aconitase swivel domain | Back alignment and domain information |
|---|
| >cd01577 IPMI_Swivel Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins | Back alignment and domain information |
|---|
| >PRK09238 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated | Back alignment and domain information |
|---|
| >cd01674 Homoaconitase_Swivel Homoaconitase swivel domain | Back alignment and domain information |
|---|
| >COG1049 AcnB Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR00117 acnB aconitate hydratase 2 | Back alignment and domain information |
|---|
| >cd01576 AcnB_Swivel Aconitase B swivel domain | Back alignment and domain information |
|---|
| >PLN00094 aconitate hydratase 2; Provisional | Back alignment and domain information |
|---|
| >PRK14812 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF06434 Aconitase_2_N: Aconitate hydratase 2 N-terminus; InterPro: IPR015929 Aconitase (aconitate hydratase; 4 | Back alignment and domain information |
|---|
| >KOG0454 consensus 3-isopropylmalate dehydratase (aconitase superfamily) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG1049 AcnB Aconitase B [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins | Back alignment and domain information |
|---|
| >COG1679 Predicted aconitase [General function prediction only] | Back alignment and domain information |
|---|
| >cd01355 AcnX Putative Aconitase X catalytic domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 565 | ||||
| 3snp_A | 908 | Crystal Structure Analysis Of Iron Regulatory Prote | 0.0 | ||
| 2b3x_A | 888 | Structure Of An Orthorhombic Crystal Form Of Human | 0.0 | ||
| 1aco_A | 754 | Crystal Structure Of Aconitase With Transaconitate | 3e-26 | ||
| 1ami_A | 754 | Steric And Conformational Features Of The Aconitase | 3e-26 | ||
| 1nis_A | 754 | Crystal Structure Of Aconitase With Trans-Aconitate | 5e-26 | ||
| 1c96_A | 753 | S642a:citrate Complex Of Aconitase Length = 753 | 5e-26 | ||
| 5acn_A | 754 | Structure Of Activated Aconitase. Formation Of The | 1e-25 | ||
| 1b0j_A | 754 | Crystal Structure Of Aconitase With Isocitrate Leng | 2e-25 | ||
| 1c97_A | 753 | S642a:isocitrate Complex Of Aconitase Length = 753 | 3e-25 | ||
| 1b0m_A | 753 | Aconitase R644q:fluorocitrate Complex Length = 753 | 4e-25 | ||
| 2pkp_A | 170 | Crystal Structure Of 3-Isopropylmalate Dehydratase | 5e-07 | ||
| 1v7l_A | 163 | Structure Of 3-Isopropylmalate Isomerase Small Subu | 3e-06 | ||
| 2hcu_A | 213 | Crystal Structure Of Smu.1381 (Or Leud) From Strept | 8e-04 |
| >pdb|3SNP|A Chain A, Crystal Structure Analysis Of Iron Regulatory Protein 1 In Complex With Ferritin H Ire Rna Length = 908 | Back alignment and structure |
|
| >pdb|2B3X|A Chain A, Structure Of An Orthorhombic Crystal Form Of Human Cytosolic Aconitase (Irp1) Length = 888 | Back alignment and structure |
| >pdb|1ACO|A Chain A, Crystal Structure Of Aconitase With Transaconitate Bound Length = 754 | Back alignment and structure |
| >pdb|1AMI|A Chain A, Steric And Conformational Features Of The Aconitase Mechanism Length = 754 | Back alignment and structure |
| >pdb|1NIS|A Chain A, Crystal Structure Of Aconitase With Trans-Aconitate And Nitrocitrate Bound Length = 754 | Back alignment and structure |
| >pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase Length = 753 | Back alignment and structure |
| >pdb|5ACN|A Chain A, Structure Of Activated Aconitase. Formation Of The (4fe-4s) Cluster In The Crystal Length = 754 | Back alignment and structure |
| >pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Isocitrate Length = 754 | Back alignment and structure |
| >pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase Length = 753 | Back alignment and structure |
| >pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex Length = 753 | Back alignment and structure |
| >pdb|2PKP|A Chain A, Crystal Structure Of 3-Isopropylmalate Dehydratase (Leud) From Methhanocaldococcus Jannaschii Dsm2661 (Mj1271) Length = 170 | Back alignment and structure |
| >pdb|1V7L|A Chain A, Structure Of 3-Isopropylmalate Isomerase Small Subunit From Pyrococcus Horikoshii Length = 163 | Back alignment and structure |
| >pdb|2HCU|A Chain A, Crystal Structure Of Smu.1381 (Or Leud) From Streptococcus Mutans Length = 213 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A Length = 888 | Back alignment and structure |
|---|
Score = 1078 bits (2790), Expect = 0.0
Identities = 329/561 (58%), Positives = 424/561 (75%), Gaps = 4/561 (0%)
Query: 1 MIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHA 60
I+ YL+A MF D+++P + ++ +EL+L+ VVPC SGPKRP D+V +++MK D+ +
Sbjct: 331 YIKKYLQAVGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFES 390
Query: 61 CLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAAL 120
CL + GFKGF + E+ + F + T L HG VVIAAITSCTNTSNPSVMLGA L
Sbjct: 391 CLGAKQGFKGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGL 450
Query: 121 VAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSG 180
+AKKA + GL V P+IKTSL+PGSGVVT YLQ SG+ YL+ LGF +VGYGC TCIGNSG
Sbjct: 451 LAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSG 510
Query: 181 DIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFE 240
+ + V AIT+ D+VA VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AG++ IDFE
Sbjct: 511 PLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFE 570
Query: 241 TEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSG 300
EP+GV G+++FL+DIWP+ +E+ V ++ V+P MFK Y+ I N WN L+ PS
Sbjct: 571 KEPLGVNAKGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPSD 630
Query: 301 TLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSP 360
L+ W+ KSTYI PP+F+++T+ P + AY LLN GDS+TTDHISPAG+I ++SP
Sbjct: 631 KLFFWNSKSTYIKSPPFFENLTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSP 690
Query: 361 AAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKL 420
AA+YL RG+ R+FNSYGSRRGND +MARGTFANIRL+N+ LN + P+TIH+P+GE L
Sbjct: 691 AARYLTNRGLTPREFNSYGSRRGNDAVMARGTFANIRLLNRFLNKQ-APQTIHLPSGEIL 749
Query: 421 SVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVG 480
VFDAA RY+ G ++LAG EYG+GSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVG
Sbjct: 750 DVFDAAERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVG 809
Query: 481 MGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDT 540
MG+IPL + PGE+A+ GLTG ERYTI +P ++P V+V D+GK+F V+RFDT
Sbjct: 810 MGVIPLEYLPGENADALGLTGQERYTIIIP---ENLKPQMKVQVKLDTGKTFQAVMRFDT 866
Query: 541 EVELAYFDHGGILQYVIRNLI 561
+VEL YF +GGIL Y+IR +
Sbjct: 867 DVELTYFLNGGILNYMIRKMA 887
|
| >1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A Length = 753 | Back alignment and structure |
|---|
| >1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii} SCOP: c.8.2.1 Length = 163 | Back alignment and structure |
|---|
| >2pkp_A Homoaconitase small subunit; beta barrel, amino-acid biosynthesis, leucine biosynthesis, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii} Length = 170 | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 Length = 865 | Back alignment and structure |
|---|
| >2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} Length = 213 | Back alignment and structure |
|---|
| >3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A Length = 171 | Back alignment and structure |
|---|
| >3q3w_A 3-isopropylmalate dehydratase small subunit; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE; 1.89A {Campylobacter jejuni} Length = 203 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 565 | |||
| 2b3y_A | 888 | Iron-responsive element binding protein 1; IRP1 IR | 100.0 | |
| 1c96_A | 753 | Mitochondrial aconitase; lyase, tricarboxylic acid | 100.0 | |
| 1l5j_A | 865 | Aconitate hydratase 2; molecular recognition, RNA | 100.0 | |
| 2pkp_A | 170 | Homoaconitase small subunit; beta barrel, amino-ac | 100.0 | |
| 1v7l_A | 163 | 3-isopropylmalate dehydratase small subunit; beta | 100.0 | |
| 3vba_A | 176 | Isopropylmalate/citramalate isomerase small subun; | 100.0 | |
| 1l5j_A | 865 | Aconitate hydratase 2; molecular recognition, RNA | 100.0 | |
| 2hcu_A | 213 | 3-isopropylmalate dehydratase small subunit; beta | 100.0 | |
| 3h5j_A | 171 | 3-isopropylmalate dehydratase small subunit; leuci | 100.0 | |
| 3q3w_A | 203 | 3-isopropylmalate dehydratase small subunit; struc | 100.0 |
| >2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-150 Score=1273.70 Aligned_cols=556 Identities=59% Similarity=1.048 Sum_probs=516.1
Q ss_pred HHHHHHHcCCCCCCCCCC-CCCcccEEEEEEcCCcccccccCCCCCCcccCCcccchhhhhhcccccCCCccCccccccc
Q 008433 2 IESYLRANKMFVDYSEPQ-SERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHACLDNRVGFKGFAIPKEYQSK 80 (565)
Q Consensus 2 v~~yl~~~g~~~~~~~~d-~~a~Y~~vieiDLs~veP~iA~P~~P~~~~~v~e~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (565)
+++|++++++|+++. || ++|.|+++|+||||+|+|+||||++|||++||+|++++|.+++.+.++.+|+..+.+.+..
T Consensus 332 ~e~y~~a~~l~~~l~-~d~~dA~Yd~~ieiDLs~leP~VAgP~~P~~~~plse~~~~~~~~l~~~~g~~g~~~~~~~~~~ 410 (888)
T 2b3y_A 332 IKKYLQAVGMFRDFN-DPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHND 410 (888)
T ss_dssp HHHHHHHHTCCCCTT-CGGGCCCCSEEEEEEGGGCCSEEECSSCTTCEEEGGGHHHHHHHHHHSCSBTTBCCCCGGGTTC
T ss_pred HHHHHHHHHHHhccC-CCCCCCceEEEEEEEhhheeEeecCCCCcccccChHHhhhhHHHhhhcccccccccccchhhcc
Confidence 577888888888753 45 8999999999999999999999999999999999999988777653322222111011101
Q ss_pred cceeecCCCcccccCCCeEEEEEecCCCCCchHHHHHHHHHHHHHHhcCCccCCCeeEEEEcCCHHHHHHHHHcChHHHH
Q 008433 81 VAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYL 160 (565)
Q Consensus 81 ~~~~~~~g~~~~~~~g~v~ia~IgSCTN~s~~dl~~aA~llak~A~~~G~kv~~~vk~~v~PgS~~V~~~l~~~Gl~~~l 160 (565)
...++|+|.+.+|.||+|++|||||||||||||+|+||++|||||+++|+||+||||++|+|||++|++||+++||+++|
T Consensus 411 ~~~~~~~g~~~~l~~g~V~~a~IgSCTN~s~~dl~~aA~lLak~A~~kG~kv~p~Vk~~v~PGS~~V~~~l~~~Gl~~~l 490 (888)
T 2b3y_A 411 HKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYL 490 (888)
T ss_dssp EEEEEETTEEEEEETTBEEEEEECCHHHHTCHHHHHHHHHHHHHHHHTTCCCCTTSEEEECCSSHHHHHHHHHTSCHHHH
T ss_pred cceeecCCccccccCCcEEEEEEecCCCCCcHHHHHHHHHHHHHHHhcCCCCCCCceEEEeCCCHHHHHHHHHcCcHHHH
Confidence 23467888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcEEeccCcccccCCCCCCchHHHhhhccCCeEEeeeeeccccCCCCCCCccCCceecCHHHHHHHHHhCCccCCCC
Q 008433 161 NHLGFHIVGYGCTTCIGNSGDIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFE 240 (565)
Q Consensus 161 ~~aG~~i~~~gCg~CiG~~~~~~~~~~~~i~~~~~~~~sv~s~NRNF~gR~g~~~~~~yLaSP~lvaA~AlaG~i~~d~~ 240 (565)
+++||+|++|||||||||++++.++++++|++|+++++||||+||||+||||+..+++|||||+|||||||+|+|++|++
T Consensus 491 ~~aGf~i~~~GC~~CiG~~~~l~~~~~~~i~~ge~~~~~vsS~NRNFeGR~g~~~~~~yLaSP~lvaA~AiaG~i~~d~~ 570 (888)
T 2b3y_A 491 SQLGFDVVGYGCMTCIGNSGPLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFE 570 (888)
T ss_dssp HHTTCCBCCSSCGGGGTCCCCCCHHHHHHHHHHTCCCEEEESSSCCCTTSSCTTCSEEEECCHHHHHHHHHHCBSCCCTT
T ss_pred HHcCCEEeCCCCcceeCCCCCCCchhhhhhccCCeeEEEEeccCCCcCcCCCCCccccEecCHHHHHHHHhcCeeecccc
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCcccccccCCCChHHHHHHhhhccCchhHHhhhhhccCCCccccccCCCCCCccccCCCcccccCCCCCCC
Q 008433 241 TEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPSGTLYAWDPKSTYIHEPPYFKD 320 (565)
Q Consensus 241 t~pl~~~~~g~~v~l~d~~P~~~ei~~~~~~~~~~~~~~~~y~~i~~g~~~w~~~~~~~~~~~~wd~~st~i~~~P~~~~ 320 (565)
+||++.+.+|++|||+||||+.+|+++++...+++++|...|..++.+++.|+.++.|+++.|+|+++||||+.||||++
T Consensus 571 ~dpl~~~~~G~~v~l~diwP~~~ei~~~~~~~~~~~~f~~~y~~~~~~~~~~~~~~~~~~~~~~w~~~St~i~~~p~f~~ 650 (888)
T 2b3y_A 571 KEPLGVNAKGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPSDKLFFWNSKSTYIKSPPFFEN 650 (888)
T ss_dssp TSCSEEETTTEEECHHHHCCCHHHHHHHHHHHCCHHHHHHHHTTTTTCCHHHHHCCCCCCSSCCCCTTCSSCCCCGGGTT
T ss_pred cCccccCCCCCcccccccCCchhhhHHHHHhcCCHHHhhhhhccccCCccccccCCCCCCCccccCCCcccccCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccceEEeecCCCcccccccCCCCCCCCChhhhHHHHcCCCCcCCccccCCCCchhhhhcccccccchhc
Q 008433 321 MTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVN 400 (565)
Q Consensus 321 ~~~~~~~~~~i~~~~vl~~~gD~itTDhIsPaG~i~~~s~a~~~L~~~g~~~~~fn~ygsrR~N~evm~rg~f~n~r~~n 400 (565)
++..+...+++.++++|+++|||||||||||||+|+.+||||+||+++|+.+++||||||||||||||+||+|+|+|+.|
T Consensus 651 ~~~~~~~~~~~~~~~~l~~~gdnitTDhIsPAg~i~~~s~ag~~L~~~gv~~~~f~syg~rRgn~~vm~rg~F~n~r~~n 730 (888)
T 2b3y_A 651 LTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGSRRGNDAVMARGTFANIRLLN 730 (888)
T ss_dssp CCSSCCCCCCEEEEEEEEEBCSCCBHHHHSCCSCCCSSSHHHHHHHHTTCCGGGCCCTGGGTTCHHHHHHTTTCCTTCEE
T ss_pred cccCCCCcccccCcEEEEEecCCccccccccCccccCCCHHHHHHHhcCCChHHhccccccccCHHHHhhhccccccccc
Confidence 98877777889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccCCceeccCCCccchhhhHHHHHHhcCCceEEEecCCcCCCCchhhhhhhhhhcCceEEEecchHHHHhhhhcc
Q 008433 401 KLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVG 480 (565)
Q Consensus 401 ~~~~~~~g~~t~~~p~g~~~~i~~~a~~y~~~g~~~iIVAG~nyG~GSSRE~AA~~~~~LGv~AVIA~SFarIh~~Nlin 480 (565)
+|++ .+|++|+|.|+|+.+++||+|++|+++|.++|||||+|||||||||||||+++++||+||||+||+|||++||+|
T Consensus 731 ~l~~-~~g~~t~~~p~g~~~~~~d~a~~y~~~g~~~iivaG~nfG~GSSREhAa~a~~~~Gi~aVIA~SFarIf~~Nli~ 809 (888)
T 2b3y_A 731 RFLN-KQAPQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVG 809 (888)
T ss_dssp TTTT-EECSEEEETTTTEEEEHHHHHHHHHHTTCCEEEECCSSBTBSCCCTHHHHHHHHTTEEEEEESCBCHHHHHHHHH
T ss_pred cccc-ccCCceeecCCCccccchhhHHHHHhcCCceEEECCCCCCCCccHHHHHHHHHHcCeeEEEEhhHHHHHHhhhhh
Confidence 9997 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccceecCCCccccccCCCCCeEEEEEcCCCccccCCCceEEEEcCCCeEEEEEeeCCCHHHHHHHHhcCHHHHHHHHh
Q 008433 481 MGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 560 (565)
Q Consensus 481 ~GiLPL~f~~~~~~~~l~l~~~e~~~i~l~~~~~~~~~g~~i~v~~~~g~~~~~~~~~~t~~e~~~~~aGGll~yv~~~~ 560 (565)
||||||+|+++++|+++.+.+++.++|++.+ .++||+.+++...+|++|.+.++++|+.|++||++||+|||+++++
T Consensus 810 ~Gllpl~~~~~~~~~~~~~~~~~~i~i~l~~---~~~~g~~v~v~~~~G~~~~~~~~~~t~~e~~~~~aGGiL~yv~~~~ 886 (888)
T 2b3y_A 810 MGVIPLEYLPGENADALGLTGQERYTIIIPE---NLKPQMKVQVKLDTGKTFQAVMRFDTDVELTYFLNGGILNYMIRKM 886 (888)
T ss_dssp HTCEEEEECTTCCHHHHTCCSCSCEEECCCS---SCCTTCEEEEEETTSCEEEEEECCCSHHHHHHHHHTSHHHHHHHHH
T ss_pred cCCceEeecccccHHHhccCCCceEEEEccc---ccCCCcEEEEEeCCCeEEEEEecCCCHHHHHHHHcCCHHHHHHHHh
Confidence 9999999999999998888888888998753 4889987765436789999999999999999999999999999988
Q ss_pred hh
Q 008433 561 IN 562 (565)
Q Consensus 561 ~~ 562 (565)
++
T Consensus 887 ~~ 888 (888)
T 2b3y_A 887 AK 888 (888)
T ss_dssp HC
T ss_pred hC
Confidence 63
|
| >1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 | Back alignment and structure |
|---|
| >2pkp_A Homoaconitase small subunit; beta barrel, amino-acid biosynthesis, leucine biosynthesis, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii} SCOP: c.8.2.1 | Back alignment and structure |
|---|
| >3vba_A Isopropylmalate/citramalate isomerase small subun; lyase, LEUD, cytosol; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1 | Back alignment and structure |
|---|
| >2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans} | Back alignment and structure |
|---|
| >3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A | Back alignment and structure |
|---|
| >3q3w_A 3-isopropylmalate dehydratase small subunit; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE; 1.89A {Campylobacter jejuni} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 565 | ||||
| d2b3ya2 | 629 | c.83.1.1 (A:2-630) Iron-responsive element binding | 1e-105 | |
| d2b3ya1 | 259 | c.8.2.1 (A:631-889) ron-responsive element binding | 1e-97 | |
| d1acoa1 | 226 | c.8.2.1 (A:529-754) Aconitase A, C-terminal domain | 1e-54 | |
| d1acoa2 | 527 | c.83.1.1 (A:2-528) Aconitase A, N-terminal domain | 2e-49 | |
| d1l5ja3 | 490 | c.83.1.1 (A:373-862) Aconitase B, C-terminal domai | 2e-30 | |
| d1v7la_ | 162 | c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyroc | 1e-24 |
| >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 629 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Aconitase iron-sulfur domain superfamily: Aconitase iron-sulfur domain family: Aconitase iron-sulfur domain domain: Iron-responsive element binding protein 1, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 328 bits (842), Expect = e-105
Identities = 171/299 (57%), Positives = 221/299 (73%)
Query: 1 MIESYLRANKMFVDYSEPQSERVYSSYLELNLEEVVPCVSGPKRPHDRVPLNEMKADWHA 60
I+ YL+A MF D+++P + ++ +EL+L+ VVPC SGPKRP D+V +++MK D+ +
Sbjct: 331 YIKKYLQAVGMFRDFNDPSQDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDFES 390
Query: 61 CLDNRVGFKGFAIPKEYQSKVAEFNFHGTPAQLRHGDVVIAAITSCTNTSNPSVMLGAAL 120
CL + GFKGF + E+ + F + T L HG VVIAAITSCTNTSNPSVMLGA L
Sbjct: 391 CLGAKQGFKGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGAGL 450
Query: 121 VAKKACELGLEVKPWIKTSLAPGSGVVTKYLQNSGLQKYLNHLGFHIVGYGCTTCIGNSG 180
+AKKA + GL V P+IKTSL+PGSGVVT YLQ SG+ YL+ LGF +VGYGC TCIGNSG
Sbjct: 451 LAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVMPYLSQLGFDVVGYGCMTCIGNSG 510
Query: 181 DIDDAVAAAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGSVNIDFE 240
+ + V AIT+ D+VA VLSGNRNFEGRVHP TRANYLASPPLV+AYA+AG++ IDFE
Sbjct: 511 PLPEPVVEAITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIRIDFE 570
Query: 241 TEPVGVGKDGKKIFLRDIWPSSEEVAHVVQKSVLPDMFKATYEAITKGNPMWNQLSVPS 299
EP+GV G+++FL+DIWP+ +E+ V ++ V+P MFK Y+ I N WN L+ PS
Sbjct: 571 KEPLGVNAKGQQVFLKDIWPTRDEIQAVERQYVIPGMFKEVYQKIETVNESWNALATPS 629
|
| >d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 259 | Back information, alignment and structure |
|---|
| >d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 226 | Back information, alignment and structure |
|---|
| >d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Length = 527 | Back information, alignment and structure |
|---|
| >d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 490 | Back information, alignment and structure |
|---|
| >d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} Length = 162 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 565 | |||
| d2b3ya1 | 259 | ron-responsive element binding protein 1, C-termin | 100.0 | |
| d2b3ya2 | 629 | Iron-responsive element binding protein 1, N-termi | 100.0 | |
| d1acoa2 | 527 | Aconitase A, N-terminal domain {Cow (Bos taurus) [ | 100.0 | |
| d1acoa1 | 226 | Aconitase A, C-terminal domain {Cow (Bos taurus) [ | 100.0 | |
| d1l5ja3 | 490 | Aconitase B, C-terminal domain {Escherichia coli [ | 100.0 | |
| d1v7la_ | 162 | Isopropylmalate isomerase LeuD {Pyrococcus horikos | 100.0 | |
| d1l5ja2 | 212 | Aconitase B, second N-terminal domain {Escherichia | 97.89 |
| >d2b3ya1 c.8.2.1 (A:631-889) ron-responsive element binding protein 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: The "swivelling" beta/beta/alpha domain superfamily: LeuD/IlvD-like family: LeuD-like domain: ron-responsive element binding protein 1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-83 Score=640.10 Aligned_cols=258 Identities=61% Similarity=1.098 Sum_probs=245.7
Q ss_pred CccccCCCcccccCCCCCCCCCCCCCCCCCcccceEEeecCCCcccccccCCCCCCCCChhhhHHHHcCCCCcCCccccC
Q 008433 301 TLYAWDPKSTYIHEPPYFKDMTMSPPGPHGVKGAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRRDFNSYGS 380 (565)
Q Consensus 301 ~~~~wd~~st~i~~~P~~~~~~~~~~~~~~i~~~~vl~~~gD~itTDhIsPaG~i~~~s~a~~~L~~~g~~~~~fn~ygs 380 (565)
++|+||++||||++||||++++...+.+.++.++|||+++|||||||||||||+|++++|+++||.++|+.+.+||+||+
T Consensus 2 ~~~~w~~~styi~~pPff~~~~~~~~~~~~i~~arvL~k~gd~iTTDHIsPAG~i~~~~~~~~~L~~~~v~~~d~n~yg~ 81 (259)
T d2b3ya1 2 KLFFWNSKSTYIKSPPFFENLTLDLQPPKSIVDAYVLLNLGDSVTTDHISPAGNIARNSPAARYLTNRGLTPREFNSYGS 81 (259)
T ss_dssp SSCCCCTTCSSCCCCGGGTTCCSSCCCCCCEEEEEEEEEBCSCCBHHHHSCCSCCCSSSHHHHHHHHTTCCGGGCCCTGG
T ss_pred CCCCCCCCCccccCCCCcCCCCCCCCCCCCccCcEEEEEeCCCCChhccCCCCcccccCchHHHHHHcCCchhcchhhhh
Confidence 57999999999999999999998888888999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhcccccccchhccccCCccCCceeccCCCccchhhhHHHHHHhcCCceEEEecCCcCCCCchhhhhhhhhhc
Q 008433 381 RRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLL 460 (565)
Q Consensus 381 rR~N~evm~rg~f~n~r~~n~~~~~~~g~~t~~~p~g~~~~i~~~a~~y~~~g~~~iIVAG~nyG~GSSRE~AA~~~~~L 460 (565)
||||||+|+|++|+|+|+.|.+++ .++++|+|+|+|+.++|||+|++|++.|.++|||||+||||||||||||++|++|
T Consensus 82 rr~n~~~m~r~~f~ni~~~n~~~~-~~~~~t~~~p~~e~~~i~d~a~~y~~~g~~~iivag~nYG~GSSREhAA~~p~~L 160 (259)
T d2b3ya1 82 RRGNDAVMARGTFANIRLLNRFLN-KQAPQTIHLPSGEILDVFDAAERYQQAGLPLIVLAGKEYGAGSSRDWAAKGPFLL 160 (259)
T ss_dssp GTTCHHHHHHTTTCCTTCEETTTT-EECSEEEETTTTEEEEHHHHHHHHHHTTCCEEEECCSSBTBSCCCTHHHHHHHHT
T ss_pred hhcchhhhhhhhhcccccccceee-ecCCceeecccccccchHHHHHHHHhcCCCeEEEeccccccccccchHHHHHHHh
Confidence 999999999999999999999996 5788999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecchHHHHhhhhccCCccceecCCCccccccCCCCCeEEEEEcCCCccccCCCceEEEEcCCCeEEEEEeeCCC
Q 008433 461 GVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPSSVSEIRPGQDVRVVTDSGKSFTCVIRFDT 540 (565)
Q Consensus 461 Gv~AVIA~SFarIh~~Nlin~GiLPL~f~~~~~~~~l~l~~~e~~~i~l~~~~~~~~~g~~i~v~~~~g~~~~~~~~~~t 540 (565)
||+||||+|||||||+||||||||||+|.++++|+++++.+++.+++.+. +.++|+.+++++..+|+++.+.++++|
T Consensus 161 Gv~aVIAkSFaRIHrsNLi~~GvLPL~F~~~~d~d~l~l~g~e~~~i~~~---~~l~~~~~v~v~~~~g~~~~~~~ridT 237 (259)
T d2b3ya1 161 GIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIP---ENLKPQMKVQVKLDTGKTFQAVMRFDT 237 (259)
T ss_dssp TEEEEEESCBCHHHHHHHHHHTCEEEEECTTCCHHHHTCCSCSCEEECCC---SSCCTTCEEEEEETTSCEEEEEECCCS
T ss_pred CceEEEEccHHHHHHhhhcccceeEEEecCCccccccccccceeeecccc---ccCCCCeEEEEEeCCCCEEEEEEeCCC
Confidence 99999999999999999999999999999999999999888888777653 378899888887778899999999999
Q ss_pred HHHHHHHHhcCHHHHHHHHhhh
Q 008433 541 EVELAYFDHGGILQYVIRNLIN 562 (565)
Q Consensus 541 ~~e~~~~~aGGll~yv~~~~~~ 562 (565)
+.|++||++||+||||++++++
T Consensus 238 ~~Eie~~~aGGiLnyVlrklaK 259 (259)
T d2b3ya1 238 DVELTYFLNGGILNYMIRKMAK 259 (259)
T ss_dssp HHHHHHHHHTSHHHHHHHHHHC
T ss_pred HHHHHHHHhcCHHHHHHHHhcC
Confidence 9999999999999999999864
|
| >d2b3ya2 c.83.1.1 (A:2-630) Iron-responsive element binding protein 1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1acoa2 c.83.1.1 (A:2-528) Aconitase A, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1acoa1 c.8.2.1 (A:529-754) Aconitase A, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1l5ja2 c.8.2.1 (A:161-372) Aconitase B, second N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|