Citrus Sinensis ID: 008491

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560----
MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL
ccccccccHHHHHHHHHHHccccEEEEEccEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHcEEEEcccccccHHHHHHHHHcccccEEEEcccccHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHccccccccccccccccccEEEEEEccccccccHHHHHcHHHHHHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHHHccEEEEcccccHHHHHHHHHHccccEEccHHHHHHHHHccccccccccccccHHHHHcccccccHHHHHHHHHHcccccEEEEcccccccHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccEEEEccccccHHHHccccccHHcccccccccccccEEEcccccEEEEcccccEEEcccccccHHHHHHHHHHccccccEEEEEEcccccccEEEEEEEEcccccccccccccccccccccccHHHHHHHHccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHcccccc
cccccccHHHHHHHHHHHHccccEEEEEcccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHcHHHHHHccccccccccccccccEEEEEEEcccccccccEEEcHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHcccEEEcccHHHHHHHHHcccccccccccHHHHEEEEccccccHHHHHHHHHHccccEEEEcccccccccEEEEEcccccHccccccccEEEEccEcccccccccccccccccccEEEEEcccccccEEEEEccccccccccccHHHHHHHHcccccEEccccEEEcccccEEEEcccccEEEEccEEEcHHHHHHHHHHccccEEEEEEEEEccccccEEEEEEEEcccccccHHHcccccccccccccHHHHHHHHHHccccHcccHHHHHHHHHHccccccccEcHHHcccHHHHHHHHccccc
MANYSQAHICQCLSRIAAVKRNSVVTitgnrhntgQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGivaplnyrwsfKEASRaitsirpvmlvtdessdsWYLELQhtaipslrwhvslgssssdfvnkRDMLTADIlkgyslrslpfthswapeGAVIICftsgttgspkgvvISHSALIVQSLAKIAIVGygeddvylhtaplchiggLSSAMAMLMVGACHvfipkfeskSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIlngggglpseLMKEATNSFPKAKLIsaygmtetsssltfmtlydptletpgqlpqafgnvtpnsvhqpqgvcvgkpaphvelkvcsdgsshvgriLTRGAHVMLRYWDqflakpsvstgevwldtgdigsiddggnvwlvgrrngriksggenvypeEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLREswqwsesncdqssknkelLLSSEVLRQHCReknltgfkaprlfvlwrkpfpltstgkirrdEVRREVMSHLKSLPSNL
MANYSQAHICQCLSRIAAVKRNSVVTItgnrhntgqqFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRvkktwkgrdsvkkilngggglpseLMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKvcsdgsshvgRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTgdigsiddggnvwLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESwqwsesncdqssknKELLLSSEVLRQHCREKnltgfkaprlfvlwrkpfpltstgkirrdevRREVMshlkslpsnl
MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLdtgdigsiddggNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPgiigivvvgiANARLTEMVVACVRLRESWQWSESNCDQssknkelllssevlRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL
******AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG******************KLISAYGMTETSSSLTFMTLYDPTLE*******AFGNV*******PQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE************LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS************************
****SQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM**********
MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ***********NKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM**********
**NYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE**C*******ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK******
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query564 2.2.26 [Sep-21-2011]
Q8VYJ1560 2-succinylbenzoate--CoA l yes no 0.978 0.985 0.597 0.0
Q8VCW8615 Acyl-CoA synthetase famil yes no 0.898 0.824 0.263 6e-40
Q4R4Z9618 Acyl-CoA synthetase famil N/A no 0.882 0.805 0.252 7e-39
O31826549 Putative acyl-CoA synthet yes no 0.870 0.894 0.253 1e-38
Q499N5615 Acyl-CoA synthetase famil yes no 0.895 0.821 0.269 4e-38
Q9S725556 4-coumarate--CoA ligase 2 no no 0.829 0.841 0.280 2e-37
A9VM74481 2-succinylbenzoate--CoA l no no 0.780 0.914 0.261 4e-37
Q72YK9481 2-succinylbenzoate--CoA l no no 0.789 0.925 0.266 1e-36
Q96CM8615 Acyl-CoA synthetase famil yes no 0.881 0.808 0.258 1e-36
Q6HC29482 2-succinylbenzoate--CoA l no no 0.785 0.919 0.258 3e-36
>sp|Q8VYJ1|MENE_ARATH 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal OS=Arabidopsis thaliana GN=AAE14 PE=1 SV=1 Back     alignment and function desciption
 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/572 (59%), Positives = 433/572 (75%), Gaps = 20/572 (3%)

Query: 1   MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
           MAN+S+ HICQCL+R+A+VKRN+VVT+ GNR  TG++FV  VL+LA GL+ +GLR+GD+V
Sbjct: 1   MANHSRPHICQCLTRLASVKRNAVVTVYGNRKRTGREFVDGVLSLAAGLIRLGLRNGDVV 60

Query: 61  AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
           +I+A NS+ +LEW+LAVA +GG+VAPLNYRWS KEA  A+  + PV+LVTDE+  SW ++
Sbjct: 61  SIAAFNSDLFLEWLLAVALVGGVVAPLNYRWSLKEAKMAMLLVEPVLLVTDETCVSWCID 120

Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNK-RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
           +Q+  IPSL+W V + S+S+DF N+    LT ++LK  +L     T++WA + AV+ICFT
Sbjct: 121 VQNGDIPSLKWRVLMESTSTDFANELNQFLTTEMLKQRTLVPSLATYAWASDDAVVICFT 180

Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
           SGTTG PKGV ISH A I QSLAKIAI GYGEDDVYLHT+PL HIGGLSSAMAMLMVGAC
Sbjct: 181 SGTTGRPKGVTISHLAFITQSLAKIAIAGYGEDDVYLHTSPLVHIGGLSSAMAMLMVGAC 240

Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
           HV +PKF++K+AL+ +EQ+ +T  ITVPA+MADL  + R  K       V+KILNGGG L
Sbjct: 241 HVLLPKFDAKTALQVMEQNHITCFITVPAMMADLIRVNRTTKNGAENRGVRKILNGGGSL 300

Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
            SEL+KEA N FP A+++SAYGMTE  SSLTFMTL+DPT E+          VT   ++Q
Sbjct: 301 SSELLKEAVNIFPCARILSAYGMTEACSSLTFMTLHDPTQES--------FKVTYPLLNQ 352

Query: 360 P-QGVCVGKPAPHVELKVCSD-GSSHVGRILTRGAHVMLRYWDQFLAKPSVST-----GE 412
           P QG CVGKPAPH+EL V  D  SS VG+ILTRG H MLRYW   +A+ +V T      E
Sbjct: 353 PKQGTCVGKPAPHIELMVKLDEDSSRVGKILTRGPHTMLRYWGHQVAQENVETSESRSNE 412

Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
            WLDTGDIG+ D+ GN+WL+GR NGRIK+GGENVYPEEVEAVL++HPGI+  VV+G+ + 
Sbjct: 413 AWLDTGDIGAFDEFGNLWLIGRSNGRIKTGGENVYPEEVEAVLVEHPGIVSAVVIGVIDT 472

Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
           RL EMVVACVRL+E W WS    D  ++     LSSE L+ HCR +NLTGFK P+ FV W
Sbjct: 473 RLGEMVVACVRLQEKWIWS----DVENRKGSFQLSSETLKHHCRTQNLTGFKIPKRFVRW 528

Query: 533 RKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
            K FPLT+TGK++RDEVRR+V+SH + + S+L
Sbjct: 529 EKQFPLTTTGKVKRDEVRRQVLSHFQIMTSSL 560
Involved in the biosynthesis of phylloquinone (vitamin K1). Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA).
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6
>sp|Q8VCW8|ACSF2_MOUSE Acyl-CoA synthetase family member 2, mitochondrial OS=Mus musculus GN=Acsf2 PE=2 SV=1 Back     alignment and function description
>sp|Q4R4Z9|ACSF2_MACFA Acyl-CoA synthetase family member 2, mitochondrial OS=Macaca fascicularis GN=ACSF2 PE=2 SV=1 Back     alignment and function description
>sp|O31826|YNGI_BACSU Putative acyl-CoA synthetase YngI OS=Bacillus subtilis (strain 168) GN=yngI PE=3 SV=1 Back     alignment and function description
>sp|Q499N5|ACSF2_RAT Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus GN=Acsf2 PE=2 SV=1 Back     alignment and function description
>sp|Q9S725|4CL2_ARATH 4-coumarate--CoA ligase 2 OS=Arabidopsis thaliana GN=4CL2 PE=1 SV=2 Back     alignment and function description
>sp|A9VM74|MENE_BACWK 2-succinylbenzoate--CoA ligase OS=Bacillus weihenstephanensis (strain KBAB4) GN=menE PE=3 SV=1 Back     alignment and function description
>sp|Q72YK9|MENE_BACC1 2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 10987) GN=menE PE=3 SV=1 Back     alignment and function description
>sp|Q96CM8|ACSF2_HUMAN Acyl-CoA synthetase family member 2, mitochondrial OS=Homo sapiens GN=ACSF2 PE=1 SV=2 Back     alignment and function description
>sp|Q6HC29|MENE_BACHK 2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=menE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query564
224122352590 predicted protein [Populus trichocarpa] 0.998 0.954 0.663 0.0
225444051565 PREDICTED: 2-succinylbenzoate--CoA ligas 0.998 0.996 0.680 0.0
356555885560 PREDICTED: 2-succinylbenzoate--CoA ligas 0.992 1.0 0.643 0.0
356533059560 PREDICTED: 2-succinylbenzoate--CoA ligas 0.992 1.0 0.652 0.0
359483953545 PREDICTED: 2-succinylbenzoate--CoA ligas 0.952 0.985 0.646 0.0
255575310551 AMP dependent CoA ligase, putative [Rici 0.953 0.976 0.629 0.0
357448509562 2-succinylbenzoate-CoA ligase [Medicago 0.978 0.982 0.627 0.0
356555887544 PREDICTED: 2-succinylbenzoate--CoA ligas 0.948 0.983 0.607 0.0
147837153520 hypothetical protein VITISV_009387 [Viti 0.921 1.0 0.670 0.0
449433565564 PREDICTED: 2-succinylbenzoate--CoA ligas 1.0 1.0 0.625 0.0
>gi|224122352|ref|XP_002330602.1| predicted protein [Populus trichocarpa] gi|222872160|gb|EEF09291.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/591 (66%), Positives = 466/591 (78%), Gaps = 28/591 (4%)

Query: 1   MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
           MANYSQAHICQCL+R++ ++  SVVTI+GNR  TG QFV DVL+LA GLL++GL +GDIV
Sbjct: 1   MANYSQAHICQCLTRLSTLRSTSVVTISGNRQKTGHQFVGDVLSLAHGLLQLGLGNGDIV 60

Query: 61  AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
           AI   NS+WYLEW+LAVAF+GGIVAPLNYRWSF+EA  A+  +RPVML+TDES   WY E
Sbjct: 61  AICGFNSDWYLEWLLAVAFVGGIVAPLNYRWSFEEAKSAMLMVRPVMLITDESCKHWYQE 120

Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
           LQ  A+PS++WHV  GS SS FV   ++LT + L+ + + +    +SWAPEGAVIICFTS
Sbjct: 121 LQSNALPSVKWHVFSGSPSSGFVKTSNVLTTETLRKHVIGTKQLDYSWAPEGAVIICFTS 180

Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD--------------------------- 213
           GTTG PKGV++SHSA+IVQSLAK+A VGY EDD                           
Sbjct: 181 GTTGRPKGVIVSHSAMIVQSLAKVAAVGYSEDDFLIIWRIVALVARNDCWLDSLFLGLLQ 240

Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
           VYLHTAPLCHIGGLSSA+ MLMVG CHV IPKFE+  A+EA++QHCVTSLITVPA+MADL
Sbjct: 241 VYLHTAPLCHIGGLSSAITMLMVGGCHVLIPKFEASLAIEAIKQHCVTSLITVPAMMADL 300

Query: 274 ATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 333
            +L R+K+TWKGR  VKK+LNGGG L +ELMK+AT  FP+AKL+SAYGMTET SSLTFMT
Sbjct: 301 ISLTRLKETWKGRQYVKKLLNGGGSLSAELMKDATELFPRAKLLSAYGMTETCSSLTFMT 360

Query: 334 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAH 393
           L+DPTL+TP Q  Q       +S HQP GVCVGKP PHVELK+ +D  S +GRILTRG H
Sbjct: 361 LHDPTLQTPAQTLQTVDKTKSSSAHQPHGVCVGKPPPHVELKISADEPSTIGRILTRGPH 420

Query: 394 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 453
           +MLRYWDQ   K + ST + WLDTGDIGSIDD GNVWLVGR+N +IKSGGEN+YPEEVEA
Sbjct: 421 LMLRYWDQNPMKATESTNDFWLDTGDIGSIDDCGNVWLVGRQNAQIKSGGENIYPEEVEA 480

Query: 454 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 513
           +LLQHPG+I  VVVG+  ARLTEMVVAC++LR+SWQW+ +NC QS++N  L L  EVLR 
Sbjct: 481 MLLQHPGVIATVVVGVPEARLTEMVVACIKLRQSWQWTNNNCKQSAENN-LTLCREVLRD 539

Query: 514 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
           +CREK LTGFK P+LF+LWRKPFPLT+TGKIRRD+VRREVMSHL+  PSNL
Sbjct: 540 YCREKKLTGFKVPKLFILWRKPFPLTTTGKIRRDQVRREVMSHLQFFPSNL 590

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225444051|ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform 1 [Vitis vinifera] gi|297740839|emb|CBI31021.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356555885|ref|XP_003546260.1| PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356533059|ref|XP_003535086.1| PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like [Glycine max] Back     alignment and taxonomy information
>gi|359483953|ref|XP_003633043.1| PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255575310|ref|XP_002528558.1| AMP dependent CoA ligase, putative [Ricinus communis] gi|223532002|gb|EEF33813.1| AMP dependent CoA ligase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357448509|ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula] gi|355483578|gb|AES64781.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356555887|ref|XP_003546261.1| PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|147837153|emb|CAN63633.1| hypothetical protein VITISV_009387 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449433565|ref|XP_004134568.1| PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query564
TAIR|locus:2028165560 AAE14 "acyl-activating enzyme 0.978 0.985 0.568 5.2e-168
TIGR_CMR|CPS_0661520 CPS_0661 "AMP-binding enzyme f 0.583 0.632 0.296 2.4e-38
UNIPROTKB|E1BS15589 ACSF2 "Uncharacterized protein 0.803 0.769 0.278 2.1e-31
UNIPROTKB|E1BVI3593 ACSF2 "Uncharacterized protein 0.803 0.763 0.278 6.5e-30
MGI|MGI:2388287615 Acsf2 "acyl-CoA synthetase fam 0.804 0.738 0.263 4.4e-29
UNIPROTKB|Q8EFK0578 SO_1971 "AMP-dependent synthet 0.618 0.603 0.255 2.9e-27
TIGR_CMR|SO_1971578 SO_1971 "AMP-binding family pr 0.618 0.603 0.255 2.9e-27
UNIPROTKB|F1PTR3612 ACSF2 "Uncharacterized protein 0.815 0.751 0.263 2.9e-27
TAIR|locus:2094716556 4CL2 "4-coumarate:CoA ligase 2 0.748 0.758 0.276 1e-26
UNIPROTKB|Q17QJ1615 ACSF2 "Acyl-CoA synthetase fam 0.815 0.747 0.265 2e-26
TAIR|locus:2028165 AAE14 "acyl-activating enzyme 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1634 (580.3 bits), Expect = 5.2e-168, P = 5.2e-168
 Identities = 325/572 (56%), Positives = 409/572 (71%)

Query:     1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
             MAN+S+ HICQCL+R+A+VKRN+VVT+ GNR  TG++FV  VL+LA GL+ +GLR+GD+V
Sbjct:     1 MANHSRPHICQCLTRLASVKRNAVVTVYGNRKRTGREFVDGVLSLAAGLIRLGLRNGDVV 60

Query:    61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
             +I+A NS+ +LEW+LAVA +GG+VAPLNYRWS KEA  A+  + PV+LVTDE+  SW ++
Sbjct:    61 SIAAFNSDLFLEWLLAVALVGGVVAPLNYRWSLKEAKMAMLLVEPVLLVTDETCVSWCID 120

Query:   121 LQHTAIPSLRWHVSLGSSSSDFVNK-RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
             +Q+  IPSL+W V + S+S+DF N+    LT ++LK  +L     T++WA + AV+ICFT
Sbjct:   121 VQNGDIPSLKWRVLMESTSTDFANELNQFLTTEMLKQRTLVPSLATYAWASDDAVVICFT 180

Query:   180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
             SGTTG PKGV ISH A I QSLAKIAI GYGEDDVYLHT+PL HIGGLSSAMAMLMVGAC
Sbjct:   181 SGTTGRPKGVTISHLAFITQSLAKIAIAGYGEDDVYLHTSPLVHIGGLSSAMAMLMVGAC 240

Query:   240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
             HV +PKF++K+AL+ +EQ+ +T  ITVPA+MADL  + R  K       V+KILNGGG L
Sbjct:   241 HVLLPKFDAKTALQVMEQNHITCFITVPAMMADLIRVNRTTKNGAENRGVRKILNGGGSL 300

Query:   300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
              SEL+KEA N FP A+++SAYGMTE  SSLTFMTL+DPT E+       F  VT   ++Q
Sbjct:   301 SSELLKEAVNIFPCARILSAYGMTEACSSLTFMTLHDPTQES-------F-KVTYPLLNQ 352

Query:   360 P-QGVCVGKPAPHVELKVCSD-GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE----- 412
             P QG CVGKPAPH+EL V  D  SS VG+ILTRG H MLRYW   +A+ +V T E     
Sbjct:   353 PKQGTCVGKPAPHIELMVKLDEDSSRVGKILTRGPHTMLRYWGHQVAQENVETSESRSNE 412

Query:   413 VWLXXXXXXXXXXXXNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPXXXXXXXXXXANA 472
              WL            N+WL+GR NGRIK+GGENVYPEEVEAVL++HP           + 
Sbjct:   413 AWLDTGDIGAFDEFGNLWLIGRSNGRIKTGGENVYPEEVEAVLVEHPGIVSAVVIGVIDT 472

Query:   473 RLTEMVVACVRLRESWQWSESNCDQXXXXXXXXXXXXXXRQHCREKNLTGFKAPRLFVLW 532
             RL EMVVACVRL+E W WS    D               + HCR +NLTGFK P+ FV W
Sbjct:   473 RLGEMVVACVRLQEKWIWS----DVENRKGSFQLSSETLKHHCRTQNLTGFKIPKRFVRW 528

Query:   533 RKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
              K FPLT+TGK++RDEVRR+V+SH + + S+L
Sbjct:   529 EKQFPLTTTGKVKRDEVRRQVLSHFQIMTSSL 560
GO:0003824 "catalytic activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0016208 "AMP binding" evidence=ISS
GO:0008756 "o-succinylbenzoate-CoA ligase activity" evidence=IGI
GO:0009507 "chloroplast" evidence=IDA
GO:0042372 "phylloquinone biosynthetic process" evidence=IMP
GO:0005777 "peroxisome" evidence=IDA
TIGR_CMR|CPS_0661 CPS_0661 "AMP-binding enzyme family protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|E1BS15 ACSF2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BVI3 ACSF2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:2388287 Acsf2 "acyl-CoA synthetase family member 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EFK0 SO_1971 "AMP-dependent synthetase and ligase family protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1971 SO_1971 "AMP-binding family protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|F1PTR3 ACSF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
TAIR|locus:2094716 4CL2 "4-coumarate:CoA ligase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q17QJ1 ACSF2 "Acyl-CoA synthetase family member 2, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VYJ1MENE_ARATH6, ., 2, ., 1, ., 2, 60.59790.97870.9857yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query564
PLN02860563 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase 0.0
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 1e-102
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 3e-95
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 7e-90
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 7e-86
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 1e-85
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 6e-80
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 5e-69
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 4e-68
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 7e-68
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 2e-67
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 2e-63
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 1e-61
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 3e-61
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 6e-61
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 2e-60
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 7e-60
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 8e-59
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 3e-57
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 1e-55
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 3e-55
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 4e-55
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 7e-54
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 2e-53
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 6e-53
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 7e-52
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 1e-50
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 4e-50
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 7e-50
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 3e-49
PRK05605573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 5e-48
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 1e-46
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 6e-45
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 3e-43
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 6e-43
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 8e-43
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 2e-41
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 4e-41
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 8e-41
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 1e-39
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 1e-39
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 5e-39
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 7e-39
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 2e-38
PRK07470528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 3e-38
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 6e-38
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 8e-37
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 1e-36
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 3e-36
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 5e-36
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 6e-36
cd05944359 cd05944, FACL_like_4, Uncharacterized subfamily of 8e-36
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 9e-36
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 4e-35
cd05924365 cd05924, FACL_like_5, Uncharacterized subfamily of 2e-34
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 2e-34
PRK08162545 PRK08162, PRK08162, acyl-CoA synthetase; Validated 4e-34
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 5e-34
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 6e-33
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 4e-32
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 7e-32
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 3e-31
PRK08974560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 5e-31
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 6e-31
cd05914448 cd05914, FACL_like_3, Uncharacterized subfamily of 8e-31
cd05910455 cd05910, FACL_like_1, Uncharacterized subfamily of 8e-31
cd05927539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 9e-31
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 1e-30
PRK13382537 PRK13382, PRK13382, acyl-CoA synthetase; Provision 3e-30
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 5e-30
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 8e-30
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 2e-29
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 2e-29
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 3e-29
PRK05677562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 5e-29
PRK06164540 PRK06164, PRK06164, acyl-CoA synthetase; Validated 6e-29
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 6e-29
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 1e-28
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 6e-28
PRK09029458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 2e-27
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 2e-27
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 3e-27
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 4e-27
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 5e-27
PRK07445452 PRK07445, PRK07445, O-succinylbenzoic acid--CoA li 6e-27
PLN02479567 PLN02479, PLN02479, acetate-CoA ligase 1e-26
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 1e-26
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 2e-26
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 6e-26
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 4e-25
PRK13390501 PRK13390, PRK13390, acyl-CoA synthetase; Provision 4e-25
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 1e-24
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 3e-24
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 4e-24
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 6e-24
cd05915509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 7e-24
TIGR03205541 TIGR03205, pimA, dicarboxylate--CoA ligase PimA 8e-23
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 1e-22
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 1e-22
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 2e-22
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 8e-22
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 1e-21
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 5e-21
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 7e-21
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 9e-20
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 1e-19
PRK07008539 PRK07008, PRK07008, long-chain-fatty-acid--CoA lig 1e-19
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 2e-19
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 3e-19
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 5e-19
PRK07768545 PRK07768, PRK07768, long-chain-fatty-acid--CoA lig 6e-19
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 7e-19
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 1e-18
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 2e-18
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 3e-18
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 4e-18
PRK123165163 PRK12316, PRK12316, peptide synthase; Provisional 9e-18
PRK07824358 PRK07824, PRK07824, O-succinylbenzoic acid--CoA li 3e-17
PRK13383516 PRK13383, PRK13383, acyl-CoA synthetase; Provision 4e-17
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 5e-17
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 6e-17
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 1e-16
cd05933594 cd05933, ACSBG_like, Bubblegum-like very long-chai 1e-16
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 3e-16
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 5e-15
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 5e-15
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 5e-15
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 7e-15
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 9e-15
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 6e-14
cd05938535 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport 6e-14
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 7e-14
PRK13391511 PRK13391, PRK13391, acyl-CoA synthetase; Provision 7e-14
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 2e-13
PRK13391511 PRK13391, PRK13391, acyl-CoA synthetase; Provision 3e-13
PRK08308414 PRK08308, PRK08308, acyl-CoA synthetase; Validated 8e-13
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 1e-12
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 3e-12
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 4e-12
cd05939474 cd05939, hsFATP4_like, Fatty acid transport protei 6e-12
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 8e-12
cd05967607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 1e-11
PRK056914334 PRK05691, PRK05691, peptide synthase; Validated 4e-11
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 1e-10
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 4e-10
PLN02614666 PLN02614, PLN02614, long-chain acyl-CoA synthetase 5e-10
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 6e-10
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 1e-09
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 1e-09
PRK05851525 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c 2e-09
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 2e-09
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 5e-09
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 1e-08
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 1e-07
PRK06060 705 PRK06060, PRK06060, acyl-CoA synthetase; Validated 1e-07
PLN02654666 PLN02654, PLN02654, acetate-CoA ligase 4e-07
PTZ00237647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 5e-07
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 1e-06
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 1e-06
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 2e-06
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 6e-06
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 2e-05
PLN02861660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 2e-05
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 3e-05
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 3e-05
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 4e-05
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 4e-05
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 5e-05
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 5e-05
PTZ00342746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 8e-05
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 1e-04
PLN02861660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 2e-04
PRK12582624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 2e-04
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 3e-04
TIGR01217652 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase 3e-04
PRK07769631 PRK07769, PRK07769, long-chain-fatty-acid--CoA lig 5e-04
cd05937468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 6e-04
COG1541438 COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme 6e-04
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 6e-04
TIGR02316628 TIGR02316, propion_prpE, propionate--CoA ligase 7e-04
cd05921559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 0.001
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 0.002
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 0.002
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 0.002
>gnl|CDD|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase Back     alignment and domain information 
 Score =  957 bits (2476), Expect = 0.0
 Identities = 382/565 (67%), Positives = 450/565 (79%), Gaps = 3/565 (0%)

Query: 1   MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
           MAN+SQAHICQCL+R+A ++ N+VVTI+GNR  TG +FV  VL+LA GLL +GLR+GD+V
Sbjct: 1   MANHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVV 60

Query: 61  AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
           AI+ALNS+ YLEW+LAVA  GGIVAPLNYRWSF+EA  A+  +RPVMLVTDE+  SWY E
Sbjct: 61  AIAALNSDLYLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEE 120

Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNK-RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
           LQ+  +PSL W V L S SS         LT ++LK  +L +    ++WAP+ AV+ICFT
Sbjct: 121 LQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALGTTELDYAWAPDDAVLICFT 180

Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
           SGTTG PKGV ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA+AMLMVGAC
Sbjct: 181 SGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGAC 240

Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
           HV +PKF++K+AL+A++QH VTS+ITVPA+MADL +L R   TWK   SV+KILNGGG L
Sbjct: 241 HVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSL 300

Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
            S L+ +A   FP AKL SAYGMTE  SSLTFMTL+DPTLE+P Q  Q       +SVHQ
Sbjct: 301 SSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQ 360

Query: 360 PQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
           PQGVCVGKPAPHVELK+  D SS VGRILTRG HVML YW Q     SV + + WLDTGD
Sbjct: 361 PQGVCVGKPAPHVELKIGLDESSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGD 420

Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
           IG ID  GN+WL+GR N RIK+GGENVYPEEVEAVL QHPG+  +VVVG+ ++RLTEMVV
Sbjct: 421 IGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVV 480

Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
           ACVRLR+ W WS++  ++ +  K L LSSE LR HCREKNL+ FK P+LFV WRKPFPLT
Sbjct: 481 ACVRLRDGWIWSDN--EKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLT 538

Query: 540 STGKIRRDEVRREVMSHLKSLPSNL 564
           +TGKIRRDEVRREV+SHL+SLPSNL
Sbjct: 539 TTGKIRRDEVRREVLSHLQSLPSNL 563

Length = 563
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213291 cd05924, FACL_like_5, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|172019 PRK13382, PRK13382, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|236019 PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|178097 PLN02479, PLN02479, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|139538 PRK13390, PRK13390, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236108 PRK07824, PRK07824, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|139531 PRK13383, PRK13383, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS) Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236231 PRK08308, PRK08308, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase Back     alignment and domain information
>gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information
>gnl|CDD|224458 COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 564
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
PLN02614666 long-chain acyl-CoA synthetase 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PLN02654666 acetate-CoA ligase 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09274552 peptide synthase; Provisional 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
PLN03052728 acetate--CoA ligase; Provisional 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PLN02479567 acetate-CoA ligase 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK056914334 peptide synthase; Validated 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
KOG36281363 consensus Predicted AMP-binding protein [General f 100.0
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 100.0
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.97
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.95
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.94
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.86
PRK09188365 serine/threonine protein kinase; Provisional 99.86
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.78
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 99.22
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 98.86
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 98.66
PLN02249597 indole-3-acetic acid-amido synthetase 97.87
PLN02620612 indole-3-acetic acid-amido synthetase 97.84
PLN02247606 indole-3-acetic acid-amido synthetase 97.83
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 97.32
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 94.61
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 87.47
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 86.22
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 80.89
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.2e-80  Score=575.45  Aligned_cols=516  Identities=33%  Similarity=0.457  Sum_probs=445.8

Q ss_pred             ccchhhHHHHHHHHHhhcCCeEEEEe--CCccccHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCcHHHHHHHHHHHhh
Q 008491            3 NYSQAHICQCLSRIAAVKRNSVVTIT--GNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI   80 (564)
Q Consensus         3 ~~~~~~l~~~l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~lA~~~~   80 (564)
                      .+.+.|++++|+..+++-||+.|.+.  ++.+.||+|+.+.++++|.+|..+|+++||+|++..||+.+|+.++|||.++
T Consensus        46 pl~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~A  125 (596)
T KOG1177|consen   46 PLDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARA  125 (596)
T ss_pred             CcccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHh
Confidence            34567999999999999999999988  6678999999999999999999999999999999999999999999999999


Q ss_pred             CceeeecCCCCChhhHHHHHhhcCCcEEEecCCch-----hhHHHH------------hhhccCcceeeeecCCCCcccc
Q 008491           81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSD-----SWYLEL------------QHTAIPSLRWHVSLGSSSSDFV  143 (564)
Q Consensus        81 G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~-----~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~  143 (564)
                      |.+.+++||++..+++++.|++.+++++|+.+...     +...++            ..+.+|.+.+++..+++.+..-
T Consensus       126 G~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~G  205 (596)
T KOG1177|consen  126 GLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLPG  205 (596)
T ss_pred             ceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCCC
Confidence            99999999999999999999999999999976532     222222            3456788888888773322211


Q ss_pred             ccccccchhhhhcccCCC----CCCCCCCCCCCeEEEEeecCCCCCCcceeechHHHHHHHHHHHHHhcCCCCceEEEec
Q 008491          144 NKRDMLTADILKGYSLRS----LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA  219 (564)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGsTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~  219 (564)
                      .   ....+.+...+...    ........|||++.|.|||||||.|||+.+||.+++++......++++..+.+++...
T Consensus       206 a---~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~  282 (596)
T KOG1177|consen  206 A---FLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPN  282 (596)
T ss_pred             c---eehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecC
Confidence            1   11111111111100    0122345789999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhHH-HHHHHHHHhCccEEEcc-CCChHHHHHHHHhccceEEEechHHHHHHHHHHhhccccCCCccceeeeecCC
Q 008491          220 PLCHIGGL-SSAMAMLMVGACHVFIP-KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG  297 (564)
Q Consensus       220 p~~~~~~~-~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~~Ge  297 (564)
                      |++|.+|. ..+++++..|+++|++. .+++...+++|+++++|.++++|+.+..+++..+....  +++++|..+.||+
T Consensus       283 Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~--~~s~lr~~vigGa  360 (596)
T KOG1177|consen  283 PLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQV--DLSSLRKGVIGGA  360 (596)
T ss_pred             chHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccC--chhhhhhheeCCC
Confidence            99999996 68999999999999965 49999999999999999999999999999998887776  7899999999999


Q ss_pred             CCCHHHHHHHHhhCCCCcEEcccccccccccccccccCCCCCCCCCCCCCcccCCCCCCcCCCCCcccCccCCcceEEEe
Q 008491          298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC  377 (564)
Q Consensus       298 ~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~  377 (564)
                      ++++++.+.+.+...=..+...||+||++...+.....++...                    ...++|..+++.+..++
T Consensus       361 ~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~--------------------~~ksVG~~m~h~Ea~iv  420 (596)
T KOG1177|consen  361 PVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEE--------------------RIKSVGHLMDHYEAAIV  420 (596)
T ss_pred             CCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHH--------------------HHhhhhhcccccccccc
Confidence            9999999999997632357778999999987776655443221                    22369999999999999


Q ss_pred             eCC-----CCCccEEEEecccchhhhccCCCCCCcccCCCceEecCceeEEcCCCcEEEEeeccceeecCceeechHHHH
Q 008491          378 SDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE  452 (564)
Q Consensus       378 ~~~-----~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie  452 (564)
                      |.+     -+..||||+||.+++.|||++++.+......++||+|||+|.++++|.++++||.+|+|+.+|++|+|.+||
T Consensus       421 ~~~g~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE  500 (596)
T KOG1177|consen  421 DKDGSEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELE  500 (596)
T ss_pred             cCCCCccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHH
Confidence            865     467799999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCccEEEEEeeecCcccceEEEEEEeccccccccccccccchhHHhhhhHHHHHHHhhhccccCcCCCcEEEEe
Q 008491          453 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW  532 (564)
Q Consensus       453 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~~~~~  532 (564)
                      +.|.+||.|.++.|++++++..++.+||+|.+..++.+              ..+.++|+++|+. ++..+++|+.++++
T Consensus       501 ~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~--------------~~t~E~lKa~Ck~-klaHFKiPky~vf~  565 (596)
T KOG1177|consen  501 DFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEG--------------KTTAETLKAMCKG-KLAHFKIPKYFVFV  565 (596)
T ss_pred             HHHhhCCCeeeEEEEccCCCcccceEEEEEEeeccccc--------------cccHHHHHHHHhc-ccccccCCcEEEEe
Confidence            99999999999999999999999999999999987321              1578999999999 69999999999986


Q ss_pred             cCCCCCCCCCCcchHHHHHHHHhhccC
Q 008491          533 RKPFPLTSTGKIRRDEVRREVMSHLKS  559 (564)
Q Consensus       533 ~~~lP~t~~GK~~R~~l~~~~~~~i~~  559 (564)
                       +.||+|.+|||+|-+++++++++++-
T Consensus       566 -~~FPlT~tGKIqKFeir~~~k~~l~l  591 (596)
T KOG1177|consen  566 -DEFPLTTTGKIQKFEIREMSKGHLGL  591 (596)
T ss_pred             -ccCcccccccchhHHHHHHHHhhcce
Confidence             66999999999999999999988763

>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query564
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 2e-27
3ivr_A509 Crystal Structure Of Putative Long-Chain-Fatty-Acid 2e-25
4g37_A555 Structure Of Cross-Linked Firefly Luciferase In Sec 2e-23
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 4e-22
3iep_A551 Firefly Luciferase Apo Structure (P41 Form) Length 7e-22
1ba3_A550 Firefly Luciferase In Complex With Bromoform Length 8e-22
4g36_A555 Photinus Pyralis Luciferase In The Adenylate-Formin 9e-22
2d1t_A548 Crystal Structure Of The Thermostable Japanese Fire 4e-21
2d1s_A548 Crystal Structure Of The Thermostable Japanese Fire 4e-21
2d1q_A548 Crystal Structure Of The Thermostable Japanese Fire 5e-21
2qvz_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO 1e-20
3qya_A582 Crystal Structure Of A Red-Emitter Mutant Of Lampyr 2e-20
3cw8_X504 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb 3e-20
2qvx_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO 4e-20
1t5d_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl 7e-20
1t5h_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE 8e-20
3dlp_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, 2e-19
4fuq_A503 Crystal Structure Of Apo Matb From Rhodopseudomonas 2e-19
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 1e-17
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 4e-17
3ipl_A501 Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig 5e-17
4gxr_A503 Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len 7e-17
4gxq_A506 Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer 1e-16
4fut_A503 Crystal Structure Of Atp Bound Matb From Rhodopseud 1e-15
3nyq_A505 Malonyl-Coa Ligase Ternary Product Complex With Met 6e-14
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 6e-14
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 3e-13
3rg2_A617 Structure Of A Two-Domain Nrps Fusion Protein Conta 7e-13
1md9_A539 Crystal Structure Of Dhbe In Complex With Dhb And A 6e-12
2v7b_A529 Crystal Structures Of A Benzoate Coa Ligase From Bu 2e-11
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 3e-10
4gr5_A570 Crystal Structure Of Slgn1deltaasub In Complex With 6e-09
3fcc_A512 Crystal Structure Of Dlta Protein In Complex With A 2e-08
3dhv_A512 Crystal Structure Of Dlta Protein In Complex With D 2e-08
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 3e-08
2p2b_A652 Acetyl-coa Synthetase, V386a Mutation Length = 652 4e-08
2p2q_A652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 6e-08
2p2f_A652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 6e-08
2p2j_A652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 6e-08
2p20_A652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 6e-08
2p2m_A652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 7e-08
3l8c_A521 Structure Of Probable D-Alanine--Poly(Phosphoribito 2e-07
1amu_A563 Phenylalanine Activating Domain Of Gramicidin Synth 4e-07
1pg3_A652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 5e-07
1ry2_A663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 1e-06
4gr4_A469 Crystal Structure Of Slgn1deltaasub Length = 469 8e-06
3b7w_A570 Crystal Structure Of Human Acyl-Coa Synthetase Medi 3e-05
2wd9_A569 Crystal Structure Of Human Acyl-coa Synthetase Medi 3e-05
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 5e-05
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 1e-04
3vnq_A544 Co-crystal Structure Of Nrps Adenylation Protein Cy 2e-04
3e7w_A511 Crystal Structure Of Dlta: Implications For The Rea 5e-04
3e53_A480 Crystal Structure Of N-Terminal Domain Of A Fatty A 5e-04
3t5a_A480 Crystal Structure Of N-Terminal Domain Of Faal28 G3 7e-04
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure 
Iteration: 1

 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 192/460 (41%), Gaps = 33/460 (7%)
Query: 45  LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
           +A GL +IG++ GD++ +   +S  ++   L  +  G I+   N   +  E ++   + R
Sbjct: 62  VASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASR 121
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
             +L+T      +Y +++  A  S    + + S+    ++  ++  AD  +   +     
Sbjct: 122 AKLLITQAC---YYEKVKDFARESDVKVMCVDSAPDGCLHFSELTQADENEAPQV----- 173
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI----AIVGYGEDDVYLHTAP 220
               +P+  V + ++SGTTG PKGV+++H  LI     ++      + +  +DV L   P
Sbjct: 174 --DISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLP 231
Query: 221 LCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV 279
           + HI  L+S M   L VGA  + +PKFE  S L  +E++ V+    VP +M  +A    +
Sbjct: 232 MFHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDL 291
Query: 280 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY--DP 337
            K      S++ I +GG  L  EL       FP+A+L   YGMTE    L     +  +P
Sbjct: 292 DK--HDLSSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEP 349
Query: 338 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLR 397
               PG       N     V    G  + +  P              G I  RG  +M  
Sbjct: 350 FDIKPGACGTVVRNAEMKIVDPETGASLPRNQP--------------GEICIRGDQIMKG 395
Query: 398 YWDQFLAKPSVSTGEVWLXXXXXXXXXXXXNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
           Y +   A       E WL             +++V R    IK  G  V P E+EA+L+ 
Sbjct: 396 YLNDPEATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIA 455
Query: 458 HPXXXXXXXXXXANARLTEMVVACVRLRESWQWSESNCDQ 497
           HP           +    E+ VA V   E  Q +E    Q
Sbjct: 456 HPEISDAAVVGLKDEDAGEVPVAFVVKSEKSQATEDEIKQ 495
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa Ligase From Rhodopseudomonas Palustris Cga009 Length = 509 Back     alignment and structure
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second Catalytic Conformation Length = 555 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form) Length = 551 Back     alignment and structure
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform Length = 550 Back     alignment and structure
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming Conformation Bound To Dlsa Length = 555 Back     alignment and structure
>pdb|2D1T|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Red-Color Emission S286n Mutant Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|2D1S|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|2D1Q|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With Mgatp Length = 548 Back     alignment and structure
>pdb|2QVZ|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3QYA|A Chain A, Crystal Structure Of A Red-Emitter Mutant Of Lampyris Turkestanicus Luciferase Length = 582 Back     alignment and structure
>pdb|3CW8|X Chain X, 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cba-adenylate Length = 504 Back     alignment and structure
>pdb|2QVX|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|1T5D|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|1T5H|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SELENOMETHIONINE Length = 504 Back     alignment and structure
>pdb|3DLP|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, BOUND To 4cb Length = 504 Back     alignment and structure
>pdb|4FUQ|A Chain A, Crystal Structure Of Apo Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|3IPL|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid-Coa Ligase From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 501 Back     alignment and structure
>pdb|4GXR|A Chain A, Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Length = 503 Back     alignment and structure
>pdb|4GXQ|A Chain A, Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimera B1 Length = 506 Back     alignment and structure
>pdb|4FUT|A Chain A, Crystal Structure Of Atp Bound Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|3NYQ|A Chain A, Malonyl-Coa Ligase Ternary Product Complex With Methylmalonyl-Coa And Amp Bound Length = 505 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure
>pdb|3RG2|A Chain A, Structure Of A Two-Domain Nrps Fusion Protein Containing The Ente Adenylation Domain And Entb Aryl-Carrier Protein From Enterobactin Biosynthesis Length = 617 Back     alignment and structure
>pdb|1MD9|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb And Amp Length = 539 Back     alignment and structure
>pdb|2V7B|A Chain A, Crystal Structures Of A Benzoate Coa Ligase From Burkholderia Xenovorans Lb400 Length = 529 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|4GR5|A Chain A, Crystal Structure Of Slgn1deltaasub In Complex With Ampcpp Length = 570 Back     alignment and structure
>pdb|3FCC|A Chain A, Crystal Structure Of Dlta Protein In Complex With Atp And Magnesium Length = 512 Back     alignment and structure
>pdb|3DHV|A Chain A, Crystal Structure Of Dlta Protein In Complex With D-Alanine Adenylate Length = 512 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|3L8C|A Chain A, Structure Of Probable D-Alanine--Poly(Phosphoribitol) Ligase Subunit-1 From Streptococcus Pyogenes Length = 521 Back     alignment and structure
>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|4GR4|A Chain A, Crystal Structure Of Slgn1deltaasub Length = 469 Back     alignment and structure
>pdb|3B7W|A Chain A, Crystal Structure Of Human Acyl-Coa Synthetase Medium-Chain Family Member 2a, With L64p Mutation Length = 570 Back     alignment and structure
>pdb|2WD9|A Chain A, Crystal Structure Of Human Acyl-coa Synthetase Medium-chain Family Member 2a (l64p Mutation) In Complex With Ibuprofen Length = 569 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|3VNQ|A Chain A, Co-crystal Structure Of Nrps Adenylation Protein Cytc1 With Atp From Streptomyces Length = 544 Back     alignment and structure
>pdb|3E7W|A Chain A, Crystal Structure Of Dlta: Implications For The Reaction Mechanism Of Non-Ribosomal Peptide Synthetase (Nrps) Adenylation Domains Length = 511 Back     alignment and structure
>pdb|3E53|A Chain A, Crystal Structure Of N-Terminal Domain Of A Fatty Acyl Amp Ligase Faal28 From Mycobacterium Tuberculosis Length = 480 Back     alignment and structure
>pdb|3T5A|A Chain A, Crystal Structure Of N-Terminal Domain Of Faal28 G330w Mutant From Mycobacterium Tuberculosis Length = 480 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query564
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 1e-114
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 1e-112
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 1e-111
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 1e-109
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 1e-105
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 1e-102
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 1e-101
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 1e-101
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 6e-94
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 2e-92
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 8e-92
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 2e-88
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 3e-86
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 2e-80
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 7e-77
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 1e-62
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 2e-47
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 7e-44
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 3e-43
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 4e-36
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 3e-31
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 9e-28
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 3e-27
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 1e-26
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 9e-25
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 2e-23
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 3e-21
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 1e-19
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 8e-14
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 1e-11
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 1e-11
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
 Score =  348 bits (896), Expect = e-114
 Identities = 119/550 (21%), Positives = 210/550 (38%), Gaps = 54/550 (9%)

Query: 8   HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
            +   L + A    + +    G    T Q    +   LA+ L          V +   NS
Sbjct: 2   SLDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRL---KAYQQSRVGLYIDNS 58

Query: 68  EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQH-TAI 126
              +  I A       +A +N R +  E +  + SI   ++      +    ++     I
Sbjct: 59  IQSIILIHACWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDI 118

Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
                 ++      + +  +   + + +      S     S+  +    I FTSGTTG  
Sbjct: 119 EFAGRDITTNGLLDNTMGIQYDTSNETVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQ 178

Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
           K V  +       ++     +G+  D  +L   P+ HI GLS  +  ++ G     + KF
Sbjct: 179 KAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDKF 238

Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
            ++  L  ++   +T +  VP  +  L      +       +++KIL GG  L + +++ 
Sbjct: 239 NAEQILTMIKNERITHISLVPQTLNWLMQQGLHEPY-----NLQKILLGGAKLSATMIET 293

Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
           A        + +++GMTET S     T                 +  P++        VG
Sbjct: 294 ALQYN--LPIYNSFGMTETCSQFLTATPEM-------------LHARPDT--------VG 330

Query: 367 KPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
            P+ +V++K+ +      G ++ +GA+VM  Y        +   G  + +TGDI  ID  
Sbjct: 331 MPSANVDVKIKNPNKEGHGELMIKGANVMNGYLYPTDLTGTFENG--YFNTGDIAEIDHE 388

Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
           G V +  RR   I SGGEN+YP ++E V  Q PGI   V VG  +    ++         
Sbjct: 389 GYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSES 448

Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
                              +S   L  +  +  L  +K P+ F       P TSTGK++R
Sbjct: 449 D------------------ISKAQLIAYLSKH-LAKYKVPKHFEK-VDTLPYTSTGKLQR 488

Query: 547 DEVRREVMSH 556
           +++ RE   H
Sbjct: 489 NKLYREGHHH 498
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Length = 512 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Length = 511 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Length = 563 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Length = 437 Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Length = 443 Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Length = 436 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query564
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.96
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.47
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 99.42
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 98.86
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 98.83
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 98.69
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 92.84
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 91.46
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 91.22
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 88.07
3g7s_A 549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 84.93
3ivr_A 509 Putative long-chain-fatty-acid COA ligase; structu 84.66
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 84.6
3ni2_A 536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 84.29
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 81.9
3c5e_A 570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 81.37
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 81.19
1v25_A 541 Long-chain-fatty-acid-COA synthetase; ligase, stru 80.54
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
Probab=100.00  E-value=4.5e-80  Score=646.42  Aligned_cols=504  Identities=21%  Similarity=0.294  Sum_probs=429.0

Q ss_pred             chhhHHHHHHHHHhhcCCeEEEEeCCccccHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCcHHHHHHHHHHHhhCcee
Q 008491            5 SQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIV   84 (564)
Q Consensus         5 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~lA~~~~G~~~   84 (564)
                      ...++.++|.++++++|+++|+.++++++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|+++
T Consensus        23 ~~~tl~~~l~~~a~~~p~~~A~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~  102 (539)
T 1mdb_A           23 AGETFGDLLRDRAAKYGDRIAITCGNTHWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALP  102 (539)
T ss_dssp             CSCCHHHHHHHHHHHHTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEE
T ss_pred             cCCCHHHHHHHHHHHCCCCEEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeEE
Confidence            34589999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCCChhhHHHHHhhcCCcEEEecCCchh-----hHHHHhhhccCcceeeeecCCCCccccccccccchhhhhcccC
Q 008491           85 APLNYRWSFKEASRAITSIRPVMLVTDESSDS-----WYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSL  159 (564)
Q Consensus        85 v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (564)
                      +|+++.++.+++.++++.++++++++++....     ....+ ...++.+..++..++.. .         +..+.....
T Consensus       103 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~  171 (539)
T 1mdb_A          103 VFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQV-QSKLPTLKNIIVAGEAE-E---------FLPLEDLHT  171 (539)
T ss_dssp             EECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHH-HHHCTTCCCEEEESCCT-T---------SEEGGGCCC
T ss_pred             ecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHH-HhcCCCccEEEEcCCcc-c---------hhhhhhccc
Confidence            99999999999999999999999999876422     12222 22345555444433211 0         000110000


Q ss_pred             CCCCCCCCCCCCCeEEEEeecCCCCCCcceeechHHHHHHHHHHHHHhcCCCCceEEEecCchhhhHHH--HHHHHHHhC
Q 008491          160 RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS--SAMAMLMVG  237 (564)
Q Consensus       160 ~~~~~~~~~~~~~~a~i~~TSGsTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~--~~~~~l~~G  237 (564)
                       .........++|+++++|||||||.||+|+++|+++.+.+......+++.++++++..+|++|.+++.  .++.+++.|
T Consensus       172 -~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G  250 (539)
T 1mdb_A          172 -EPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAG  250 (539)
T ss_dssp             -CCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTT
T ss_pred             -cccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchhhHHHHHHHHHhC
Confidence             11112345689999999999999999999999999999998888889999999999999999999986  588999999


Q ss_pred             ccEEEccCCChHHHHHHHHhccceEEEechHHHHHHHHHHhhccccCCCccceeeeecCCCCCHHHHHHHHhhCCCCcEE
Q 008491          238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI  317 (564)
Q Consensus       238 ~~~v~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~~Ge~l~~~~~~~~~~~~~~~~i~  317 (564)
                      +++++.+.+++..+++.|+++++|++.++|+.+..+++.......  .+++||.+++|||++++++.+++.+.+ +++++
T Consensus       251 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~--~l~~lr~~~~gG~~l~~~~~~~~~~~~-~~~~~  327 (539)
T 1mdb_A          251 GRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRD--DLSSLQVLQVGGAKFSAEAARRVKAVF-GCTLQ  327 (539)
T ss_dssp             CEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCC--CCTTCCEEEEESSCCCHHHHTTHHHHT-CSEEE
T ss_pred             CEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCC--CccceeEEEEcCCCCCHHHHHHHHHHh-CCcEE
Confidence            999999989999999999999999999999999999988765443  678999999999999999999999998 89999


Q ss_pred             cccccccccccccccccCCCCCCCCCCCCCcccCCCCCCcCCCCCcccCccCCcc-eEEEeeCC-----CCCccEEEEec
Q 008491          318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV-ELKVCSDG-----SSHVGRILTRG  391 (564)
Q Consensus       318 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~~~~-----~~~~Gel~v~~  391 (564)
                      +.||+||++..+....  ...                    .....++|+|+++. +++++|++     .|+.|||+++|
T Consensus       328 ~~YG~TE~~~~~~~~~--~~~--------------------~~~~~~~G~p~~~~~~~~i~d~~~~~~~~g~~GEl~v~g  385 (539)
T 1mdb_A          328 QVFGMAEGLVNYTRLD--DPE--------------------EIIVNTQGKPMSPYDESRVWDDHDRDVKPGETGHLLTRG  385 (539)
T ss_dssp             EEEECTTSCEEECCTT--SCH--------------------HHHHHCCCEESSTTCEEEEECTTSCBCCTTCCEEEEEEC
T ss_pred             EEEcCCCCcccccCCC--CcH--------------------HhcCCCCCcccCCCceEEEECCCCCCCcCCCcceEEeeC
Confidence            9999999653322110  000                    00124699999764 89999875     57899999999


Q ss_pred             ccchhhhccCCCCCCcccCCCceEecCceeEEcCCCcEEEEeeccceeecCceeechHHHHHHHHcCCCccEEEEEeeec
Q 008491          392 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN  471 (564)
Q Consensus       392 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~v~~~~~  471 (564)
                      ++++.||+++++.+...|..+|||+|||+|++++||.++++||.+|+||++|++|+|.+||++|.+||+|.+++|++.++
T Consensus       386 ~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~  465 (539)
T 1mdb_A          386 PYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVSMPD  465 (539)
T ss_dssp             TTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEEGGGCEECSSCEECHHHHHHHHTTSTTEEEEEEEEEEE
T ss_pred             cccchhhcCChhhhhhhccCCCCeecCceEEECCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCcceEEEEeccc
Confidence            99999999999988888888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccceEEEEEEeccccccccccccccchhHHhhhhHHHHHHHhhhccccCcCCCcEEEEecCCCCCCCCCCcchHHHHH
Q 008491          472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR  551 (564)
Q Consensus       472 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~~~~~~~~lP~t~~GK~~R~~l~~  551 (564)
                      +..++.++++|++.+.                 ..+.++++++++++.|+.|++|..++++ ++||+|++||++|++|++
T Consensus       466 ~~~g~~~~a~vv~~~~-----------------~~~~~~l~~~l~~~~L~~~~~P~~i~~v-~~lP~t~~GKi~r~~L~~  527 (539)
T 1mdb_A          466 QFLGERSCVFIIPRDE-----------------APKAAELKAFLRERGLAAYKIPDRVEFV-ESFPQTGVGKVSKKALRE  527 (539)
T ss_dssp             TTTEEEEEEEEEESSS-----------------CCCHHHHHHHHHHTTCCGGGSCSEEEEC-SSCCBCTTSCBCHHHHHH
T ss_pred             cccCceEEEEEEECCC-----------------CCCHHHHHHHHHhCCCCcccCCCEEEEe-ccCCCCCCcCEeHHHHHH
Confidence            8888999999987642                 2456889999998449999999998874 889999999999999999


Q ss_pred             HHHhhccCCCCC
Q 008491          552 EVMSHLKSLPSN  563 (564)
Q Consensus       552 ~~~~~i~~~~~~  563 (564)
                      .+.+.|+.+|++
T Consensus       528 ~~~~~i~~~y~~  539 (539)
T 1mdb_A          528 AISEKLLAGFKK  539 (539)
T ss_dssp             HHHHHHHTC---
T ss_pred             HHHHHHhccccC
Confidence            999999999974
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 564
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 7e-95
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 6e-78
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 4e-76
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 1e-74
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 1e-61
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 7e-59
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 2e-57
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  301 bits (771), Expect = 7e-95
 Identities = 116/577 (20%), Positives = 213/577 (36%), Gaps = 75/577 (12%)

Query: 11  QCLSRIAAVKRNSVVTI------TGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISA 64
            CL R      +    I      + ++H + ++  +DV   A  LL++G++ GD+VAI  
Sbjct: 76  NCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYM 135

Query: 65  LNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESS---------- 114
                    +LA A IG + + +   +S +  +  I      +++T +            
Sbjct: 136 PMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLK 195

Query: 115 DSWYLELQHTAIPSLRWHVSLGSSSS--DFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 172
            +    L++  + S+   + L  + S  D+   RD+   D+++  S    P   +   E 
Sbjct: 196 KNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQP--EAMNAED 253

Query: 173 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIV-GYGEDDVYLHTAPLCHIGGLSSAM 231
            + I +TSG+TG PKGV+ +    +V +      V  Y   D+Y  TA +  + G S  +
Sbjct: 254 PLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLL 313

Query: 232 -AMLMVGACHVFIPKFES----KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 286
              L  GA  +      +        + V++H V  L T P  +  L            R
Sbjct: 314 YGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDR 373

Query: 287 DSVKKILNGGGGLPSELMKEATNSF--PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 344
            S++ + + G  +  E  +         K  ++  +  TET   +            PG 
Sbjct: 374 SSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMIT--------PLPGA 425

Query: 345 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRG-----AHV 394
           +    G                +P   V+  +  +          G ++        A  
Sbjct: 426 IELKAG-------------SATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQART 472

Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
           +    ++F      ST +    +GD    D+ G  W+ GR +  +   G  +   E+E+ 
Sbjct: 473 LFGDHERFEQTY-FSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESA 531

Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
           L+ HP I    VVGI +A   + + A V L    + S     +             +R  
Sbjct: 532 LVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAE-------------VRNW 578

Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
            R++ +     P +   W    P T +GKI R  +R+
Sbjct: 579 VRKE-IGPLATPDVLH-WTDSLPKTRSGKIMRRILRK 613
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query564
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 90.63
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 85.52
d1amua_514 Phenylalanine activating domain of gramicidin synt 85.29
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 85.06
d1pg4a_ 643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 83.18
d1ry2a_ 640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 81.75
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=7.5e-77  Score=630.13  Aligned_cols=514  Identities=20%  Similarity=0.234  Sum_probs=417.1

Q ss_pred             HHHHHHHHhhcCCeEEEEeC------CccccHHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCcHHHHHHHHHHHhhCce
Q 008491           10 CQCLSRIAAVKRNSVVTITG------NRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGI   83 (564)
Q Consensus        10 ~~~l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~lA~~~~G~~   83 (564)
                      .++|+++++.+||++|+++.      .+++||+||.+++.++|++|+++|+++||+|+++++|++++++++|||+++|++
T Consensus        75 ~n~ldrh~~~~~d~~Ali~~~~~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav  154 (643)
T d1pg4a_          75 ANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAV  154 (643)
T ss_dssp             HHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCE
T ss_pred             HHHHHHHHHhCCCCEEEEEEecCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHHHHhCeE
Confidence            46777899999999999963      257999999999999999999999999999999999999999999999999999


Q ss_pred             eeecCCCCChhhHHHHHhhcCCcEEEecCCchh----------hHHHHhhhccCcceeeeecCCCCcccc-ccccccchh
Q 008491           84 VAPLNYRWSFKEASRAITSIRPVMLVTDESSDS----------WYLELQHTAIPSLRWHVSLGSSSSDFV-NKRDMLTAD  152 (564)
Q Consensus        84 ~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  152 (564)
                      ++|+++.++.+.+.+++++++++++|+++....          ....+.....+.+..++.......... .........
T Consensus       155 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  234 (643)
T d1pg4a_         155 HSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWR  234 (643)
T ss_dssp             EEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCCBTTEEEHH
T ss_pred             EEecCCCCCHHHHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCcccccccccchhhh
Confidence            999999999999999999999999999865321          111222234556666666554332211 111112222


Q ss_pred             hhhcccCCCCCCCCCCCCCCeEEEEeecCCCCCCcceeechHHHHHHHHH-HHHHhcCCCCceEEEecCchhhhHHH-HH
Q 008491          153 ILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLA-KIAIVGYGEDDVYLHTAPLCHIGGLS-SA  230 (564)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~l~~~p~~~~~~~~-~~  230 (564)
                      ..... ..........+++|+++|+|||||||.||+|+++|++++..... ....+++.++|++++..|++|++++. .+
T Consensus       235 ~~~~~-~~~~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~l  313 (643)
T d1pg4a_         235 DLIEK-ASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLL  313 (643)
T ss_dssp             HHHTT-SCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTT
T ss_pred             hhhcc-cCcccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHH
Confidence            22221 12222334457899999999999999999999999997655444 44567889999999999999999985 56


Q ss_pred             HHHHHhCccEEEccC----CChHHHHHHHHhccceEEEechHHHHHHHHHHhhccccCCCccceeeeecCCCCCHHHHHH
Q 008491          231 MAMLMVGACHVFIPK----FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE  306 (564)
Q Consensus       231 ~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~~Ge~l~~~~~~~  306 (564)
                      +.+|+.|+++++++.    .++..+++.|+++++|+++++|+.+..|++.........++++||.++++|++++++++++
T Consensus       314 ~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G~pl~~~~~~~  393 (643)
T d1pg4a_         314 YGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEW  393 (643)
T ss_dssp             HHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHH
T ss_pred             HHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEEeCCCCHHHHHH
Confidence            788999999999764    4789999999999999999999999999887655544457899999999999999999999


Q ss_pred             HHhhCC--CCcEEcccccccccccccccccCCCCCCCCCCCCCcccCCCCCCcCCCCCcccCccCCcceEEEeeCC----
Q 008491          307 ATNSFP--KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG----  380 (564)
Q Consensus       307 ~~~~~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~----  380 (564)
                      +.+.++  ++++++.||+||+++.++.......                     ....+++|+|++|++++++|++    
T Consensus       394 ~~~~~g~~~~~i~~~yG~TE~g~~~~~~~~~~~---------------------~~~~gs~G~p~~g~~v~ivd~~g~~~  452 (643)
T d1pg4a_         394 YWKKIGKEKCPVVDTWWQTETGGFMITPLPGAI---------------------ELKAGSATRPFFGVQPALVDNEGHPQ  452 (643)
T ss_dssp             HHHHTTTTCSCEEEEBCCGGGSSCSBCCCTTTC---------------------CBCTTCCBSBCTTCCEEEECTTCCBC
T ss_pred             HHHHhCCCCceEEEeechhhccceEEecCCCcc---------------------CCCCCccccccCCCEEEEECCCCCCC
Confidence            999984  5789999999999876554322111                     0134569999999999999876    


Q ss_pred             -CCCccEEEEec--ccchhhhccCCCCCCccc--CCCceEecCceeEEcCCCcEEEEeeccceeecCceeechHHHHHHH
Q 008491          381 -SSHVGRILTRG--AHVMLRYWDQFLAKPSVS--TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL  455 (564)
Q Consensus       381 -~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~--~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ie~~l  455 (564)
                       .++.|||+++|  |+++.||+++++.+...+  ..+|||+|||+|++++||.++++||++|+||++|++|+|.+||++|
T Consensus       453 ~~g~~Gel~v~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~~l  532 (643)
T d1pg4a_         453 EGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESAL  532 (643)
T ss_dssp             CSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHH
T ss_pred             CCCceEEEEEecCCCcccccccCChhhchhhhcccCCCeEEcCCEEEECCCceEEEecccccEEEECCEEECHHHHHHHH
Confidence             57789999999  568899999876544332  3578999999999999999999999999999999999999999999


Q ss_pred             HcCCCccEEEEEeeecCcccceEEEEEEeccccccccccccccchhHHhhhhHHHHHHHhhhccccCcCCCcEEEEecCC
Q 008491          456 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP  535 (564)
Q Consensus       456 ~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~p~~~~~~~~~  535 (564)
                      .+||.|.|++|++.+++..++.++++|+++++...             .....++|++++++ +|+++++|..+++ +++
T Consensus       533 ~~~p~V~eaaVvg~~d~~~ge~~~a~Vv~~~~~~~-------------~~~~~~~i~~~~~~-~L~~~~vP~~i~~-v~~  597 (643)
T d1pg4a_         533 VAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEP-------------SPELYAEVRNWVRK-EIGPLATPDVLHW-TDS  597 (643)
T ss_dssp             HHSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCC-------------CHHHHHHHHHHHHH-HTCGGGCCSEEEE-CSC
T ss_pred             HhCCCcceEEEEEEECCCCCeEEEEEEEECCCCCC-------------CHHHHHHHHHHHHh-hCCcccCccEEEE-ECC
Confidence            99999999999999999899999999999876210             11235689999998 7999999998877 488


Q ss_pred             CCCCCCCCcchHHHHHHHHhhccCC
Q 008491          536 FPLTSTGKIRRDEVRREVMSHLKSL  560 (564)
Q Consensus       536 lP~t~~GK~~R~~l~~~~~~~i~~~  560 (564)
                      ||+|++||++|++|++++..+.+.+
T Consensus       598 lP~T~sGKi~R~~Lr~~~~~~~~~~  622 (643)
T d1pg4a_         598 LPKTRSGKIMRRILRKIAAGDTSNL  622 (643)
T ss_dssp             CCBCTTSCBCHHHHHHHHHTC----
T ss_pred             CCCCCCcCccHHHHHHHhcCCcccc
Confidence            9999999999999999998764443
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure