Citrus Sinensis ID: 008526

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560---
MERDSSDDDDDRETLIHQNDTKHGNHRLPTSDNNEDEEHNRRHSTFHIDDFPNAPPIRRRFTFDFKKLNNKRYLFALSLPLLIILLYFSVNLRSLFSGNYVNFRFDSLADRMRESELRALSLLKQQQSHLLSLWNQSFVNNSYGNNTNNPFFQEAKSVLLNQISLNRQIEQILLSPHKVSNFTPNDAVWGLESCRKIDSIIPNKRTVEWKPKSDKFLFAICLSGQMSNHLICLEKHMFLAALLNRVLVIPSSKFDYQYSRVLDIEHINDCLGRKVVVSFENFMEMEKNHAHIDRFLCYFGLPQPCFVDDEHIKKLKQLGISMGKTETVWKNEDTRKPSKRTVQDIEGKFKTDDDVIAVGDLFYADVERDWVMQPGGPINHRCKTLIEPSRLIMVTAQRFVQTFLGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESETSLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLRKDWGSTSLCDEYLCQGEEPNFIAEDE
ccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEccccccEEEEEEcccccccEEEEHHHHHHHHHHHccEEEcccccccccccEEEcHHHHHHHccccEEEEHHHHHHHHccccEEcEEEEEEcccccccccHHHHHHHHHHcccccccccccccccccccccHHHHHHHHccccccccEEEccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHccccccccEEEHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccccccccccccccc
ccccccccHHHHHccccccccccccccccccccccccccccccccEEcccccccccHHHHHcHHHHHHHcHHHHHEHHHHHHHHHHHHHccHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHccccccccEEEEccccccEEEEEEEccccccHHHHHHHHHHHHHHHHcEEEEccccccccEcEEEEHHHHHHHcccEEEEEHHHHHHHccccccEcEEEEEEcccccccccHHHHHHHHHHcccccccccccccHHccccccccHHHHHHHccccccEEEEccEEEEccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEHHHHcccEEEccccccccccccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHEEEEEccccccEEEccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHEEcccccccHHHHHHHHHccccccccHHHHcccccccEEEccc
merdssdddddretlihqndtkhgnhrlptsdnnedeehnrrhstfhiddfpnappirrrftFDFKKLNNKRYLFALSLPLLIILLYFSVNLrslfsgnyvnfrFDSLADRMRESELRALSLLKQQQSHLLSLWNQSFvnnsygnntnnpfFQEAKSVLLNQISLNRQIEQIllsphkvsnftpndavwglescrkidsiipnkrtvewkpksdKFLFAICLSGQMSNHLICLEKHMFLAALLNRVLvipsskfdyqysrvLDIEHINDCLGRKVVVSFENFMEMEKNHAHIDRFlcyfglpqpcfvddeHIKKLKQLGIsmgktetvwknedtrkpskrtVQDIEgkfktdddviAVGDLFyadverdwvmqpggpinhrcktliepsrLIMVTAQRFVQTFLGSNFIALHFRRhgflkfcnakkpscfypipqAADCITRLAERAKAPVIYLSTDAAESETSLLQSLVVLNGktialvkrpprnsaekWDSLLYRHHLEDDSQVEAMLDKTICAMSNvfigasgstfTEDIMRLRKdwgstslcdeylcqgeepnfiaede
merdssdddddretlihqndtkhgnhrlptsdnnedEEHNRRhstfhiddfpnappiRRRFTFDFKKLNNKRYLFALSLPLLIILLYFSVNLRSLFSGNYVNFRFDSLADRMRESELRALSLLKQQQSHLLSLWNQSFVNNSYGNNTNNPFFQEAKSVLLNQISLNRQIEQILlsphkvsnfTPNDAVWGLESCRKidsiipnkrtvewkpkSDKFLFAICLSGQMSNHLICLEKHMFLAALLNRVLVIPSSKFDYQYSRVLDIEHINDCLGRKVVVSFENFMEMEKNHAHIDRFLCYFGLPQPCFVDDEHIKKLKQlgismgktetvwknedtrkpskrtvqdiegkfktdddviaVGDLFYADVERDWVMQPGGPINHRCKTLIEPSRLIMVTAQRFVQTFLGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESETSLLQSLVVLNGKtialvkrpprnsaeKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLRKDWGSTSlcdeylcqgeepnfiaede
MerdssdddddreTLIHQNDTKHGNHRLPTSDNNEDEEHNRRHSTFHIDDFPNAPPIRRRFTFDFKKLNNKRylfalslplliillyfsVNLRSLFSGNYVNFRFDSLADRMRESELRAlsllkqqqshllslWNQSFVNNSYGNNTNNPFFQEAKSVLLNQISLNRQIEQILLSPHKVSNFTPNDAVWGLESCRKIDSIIPNKRTVEWKPKSDKFLFAICLSGQMSNHLICLEKHMFLAALLNRVLVIPSSKFDYQYSRVLDIEHINDCLGRKVVVSFENFMEMEKNHAHIDRFLCYFGLPQPCFVDDEHIKKLKQLGISMGKTETVWKNEDTRKPSKRTVQDIEGKFKTDDDVIAVGDLFYADVERDWVMQPGGPINHRCKTLIEPSRLIMVTAQRFVQTFLGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESETSLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLRKDWGSTSLCDEYLCQGEEPNFIAEDE
**********************************************HIDDFPNAPPIRRRFTFDFKKLNNKRYLFALSLPLLIILLYFSVNLRSLFSGNYVNFRFDSLADRMRESELRALSLLKQQQSHLLSLWNQSFVNNSYGNNTNNPFFQEAKSVLLNQISLNRQIEQILLSPHKVSNFTPNDAVWGLESCRKIDSIIPNKRTVEWKPKSDKFLFAICLSGQMSNHLICLEKHMFLAALLNRVLVIPSSKFDYQYSRVLDIEHINDCLGRKVVVSFENFMEMEKNHAHIDRFLCYFGLPQPCFVDDEHIKKLKQLGISMGKTETVW****************EGKFKTDDDVIAVGDLFYADVERDWVMQPGGPINHRCKTLIEPSRLIMVTAQRFVQTFLGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESETSLLQSLVVLNGKTIALVKR*****AEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLRKDWGSTSLCDEYLCQG**********
************************************************DDFP**PPI**RFTFDFKKLNNKRYLFALSLPLLIILLYFSVNLRSLFSGNYVNFR**********SELRALSLLKQQQSHLLSLWNQSFV***********FFQEAKSVLLNQISLNRQIEQILLSPHK**NFTPNDAVWGLES***************WKPKSDKFLFAICLSGQMSNHLICLEKHMFLAALLNRVLVIPSSKFDYQYSRVLDIEHINDCLGRKVVVSFENFMEMEKNHAHIDRFLCYFGLPQPCFVDDEHIKKLKQLGISMGKT******************DIEGKFKTDDDVIAVGDLFYADVERDWVMQPGGPINHRCKTLIEPSRLIMVTAQRFVQTFLGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESETSLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLRKDWGSTSLCDEYLCQGEEPN******
************ETLIHQNDTKHGNHRLP*************HSTFHIDDFPNAPPIRRRFTFDFKKLNNKRYLFALSLPLLIILLYFSVNLRSLFSGNYVNFRFDSLADRMRESELRALSLLKQQQSHLLSLWNQSFVNNSYGNNTNNPFFQEAKSVLLNQISLNRQIEQILLSPHKVSNFTPNDAVWGLESCRKIDSIIPNKRTVEWKPKSDKFLFAICLSGQMSNHLICLEKHMFLAALLNRVLVIPSSKFDYQYSRVLDIEHINDCLGRKVVVSFENFMEMEKNHAHIDRFLCYFGLPQPCFVDDEHIKKLKQLGISMGKTETV*************VQDIEGKFKTDDDVIAVGDLFYADVERDWVMQPGGPINHRCKTLIEPSRLIMVTAQRFVQTFLGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESETSLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLRKDWGSTSLCDEYLCQGEEPNFIAEDE
*************************************************DFPNAPPIRRRFTFDFKKLNNKRYLFALSLPLLIILLYFSVNLRSLFSGNYVNFRFDSLADRMRESELRALSLLKQQQSHLLSLWNQSFVN*******NNPFFQEAKSVLLNQISLNRQIEQILLSPHKV***TPNDAVWGLESCRKIDSIIPNKRTVEWKPKSDKFLFAICLSGQMSNHLICLEKHMFLAALLNRVLVIPSSKFDYQYSRVLDIEHINDCLGRKVVVSFENFMEMEKNHAHIDRFLCYFGLPQPCFVDDEHIKKLKQLGISMGKTETVWKNEDTRKPSKRTVQDIEGKFKTDDDVIAVGDLFYADVERDWVMQPGGPINHRCKTLIEPSRLIMVTAQRFVQTFLGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESETSLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLRKDWGSTSLCDEYLCQGEEPNFIAE**
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MERDSSDDDDDRETLIHQNDTKHGNHRLPTSDNNEDEEHNRRHSTFHIDDFPNAPPIRRRFTFDFKKLNNKRYLFALSLPLLIILLYFSVNLRSLFSGNYVNFRFDSLADRMRESELRALSLLKQQQSHLLSLWNQSFVNNSYGNNTNNPFFQEAKSVLLNQISLNRQIEQILLSPHKVSNFTPNDAVWGLESCRKIDSIIPNKRTVEWKPKSDKFLFAICLSGQMSNHLICLEKHMFLAALLNRVLVIPSSKFDYQYSRVLDIEHINDCLGRKVVVSFENFMEMEKNHAHIDRFLCYFGLPQPCFVDDEHIKKLKQLGISMGKTETVWKNEDTRKPSKRTVQDIEGKFKTDDDVIAVGDLFYADVERDWVMQPGGPINHRCKTLIEPSRLIMVTAQRFVQTFLGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESETSLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLRKDWGSTSLCDEYLCQGEEPNFIAEDE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query563 2.2.26 [Sep-21-2011]
Q8WR51424 GDP-fucose protein O-fuco yes no 0.246 0.327 0.293 2e-06
>sp|Q8WR51|OFUT2_CAEEL GDP-fucose protein O-fucosyltransferase 2 OS=Caenorhabditis elegans GN=pad-2 PE=1 SV=1 Back     alignment and function desciption
 Score = 55.1 bits (131), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 28/167 (16%)

Query: 395 TAQRFVQTFLGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYL 454
           T ++  +T +G  ++ +H+RR  FL    A+ P+    IP  A  +  L ++     IYL
Sbjct: 271 TKEKPRRTAIGGPYLGIHWRRRDFLYARRAQLPT----IPGTAKILQDLCKKLDLQKIYL 326

Query: 455 STDAAESETSLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRH---HLEDDSQVEAMLD 511
           +TDA + E   L++L  LNG+                   +YR       +D Q+ A++D
Sbjct: 327 ATDAPDQEVDELKAL--LNGEL-----------------EVYRFTDTQKLNDGQI-AIID 366

Query: 512 KTICAMSNVFIGASGSTFTEDIMRLRKDWG-STSLCDEYLCQGEEPN 557
           + +CA +  FIG+  STFT  I   R+  G   S     LC   EP 
Sbjct: 367 QYLCAHAAYFIGSYESTFTFRIQEDREIIGFPISTTFNRLCPDTEPT 413
Required for normal morphogenesis and development. Catalyzes the reaction that attaches fucose through an O-glycosidic linkage to a conserved serine or threonine residue in thrombospondin type 1 repeats.
Caenorhabditis elegans (taxid: 6239)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 2EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query563
255585251565 conserved hypothetical protein [Ricinus 0.973 0.969 0.672 0.0
297795837566 hypothetical protein ARALYDRAFT_918074 [ 0.985 0.980 0.653 0.0
225441959559 PREDICTED: uncharacterized protein LOC10 0.955 0.962 0.625 0.0
15240670566 peptide-O-fucosyltransferase [Arabidopsi 0.985 0.980 0.648 0.0
21595347566 unknown [Arabidopsis thaliana] 0.985 0.980 0.646 0.0
224071029527 predicted protein [Populus trichocarpa] 0.923 0.986 0.636 0.0
297850124583 hypothetical protein ARALYDRAFT_889130 [ 0.978 0.945 0.615 0.0
449453409573 PREDICTED: uncharacterized protein LOC10 0.921 0.905 0.656 0.0
30685232564 peptide-O-fucosyltransferase [Arabidopsi 0.978 0.976 0.618 0.0
359482537603 PREDICTED: uncharacterized protein LOC10 0.955 0.892 0.579 0.0
>gi|255585251|ref|XP_002533327.1| conserved hypothetical protein [Ricinus communis] gi|223526849|gb|EEF29063.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  759 bits (1960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/580 (67%), Positives = 465/580 (80%), Gaps = 32/580 (5%)

Query: 1   MERDSSDDDDDRETLIHQNDTKHGNHR--LPTSDNNEDEEHNRRHSTFHIDDFPNAPPIR 58
           MERDSSD++DDRE LI QND KH NH+  +PTS       H R  STFHI+++     IR
Sbjct: 1   MERDSSDEEDDRENLIEQNDRKHHNHQQTVPTSS-----PHRRSFSTFHIEEYGGV--IR 53

Query: 59  RRFTFDFKKLNNKRY---LFALSLPLLIILLYFSVNLRSLFSGNYVNFRFDSLADRMRES 115
           RR       L NKRY   L A+ LPLLII++YFS +LRSLFS N  +  F+S +DRMRE+
Sbjct: 54  RR-------LFNKRYYYYLLAIFLPLLIIIVYFSADLRSLFSANISSLNFNSASDRMREA 106

Query: 116 ELRALSLLKQQQSHLLSLWNQSFVNNS--------YGNNTNNPFFQEAKSVLLNQISLNR 167
           EL+AL LL+QQQ  LLS++NQSF + +        + N+ +N   +  +S LL Q++ N+
Sbjct: 107 ELQALYLLEQQQLSLLSIFNQSFPSRNKNFSSNSSFINSFDNVKIENFRSALLKQMTFNK 166

Query: 168 QIEQILLSPHKVSN----FTPNDAVWGLESCRKIDSIIPNKRTVEWKPKSDKFLFAICLS 223
           QI+QILLSPHK  N     + + + +G + C+K++S   +++T+EWKP+SDKFLF ICLS
Sbjct: 167 QIQQILLSPHKSGNENVSGSFSGSGFGFDRCKKVESRFLDRKTIEWKPRSDKFLFPICLS 226

Query: 224 GQMSNHLICLEKHMFLAALLNRVLVIPSSKFDYQYSRVLDIEHINDCLGRKVVVSFENFM 283
           GQMSNHLICLEKHMF AALLNRVLV+PSSKFDYQY+RVLDIEHIN C+GRKVVV+FE F+
Sbjct: 227 GQMSNHLICLEKHMFFAALLNRVLVMPSSKFDYQYNRVLDIEHINLCVGRKVVVTFEEFV 286

Query: 284 EMEKNHAHIDRFLCYFGLPQPCFVDDEHIKKLKQLGISMGKTETVWKNEDTRKPSKRTVQ 343
           +M KNH HIDRF+CYF  P  C+VD+EH+KKLK LGI MGK E+ WK ED +KPS++TVQ
Sbjct: 287 QMRKNHVHIDRFICYFSSPTACYVDEEHVKKLKGLGILMGKPESPWK-EDVKKPSQKTVQ 345

Query: 344 DIEGKFKTDDDVIAVGDLFYADVERDWVMQPGGPINHRCKTLIEPSRLIMVTAQRFVQTF 403
           D+  KF ++DDVIA+GD+FYAD+E+DWVMQPGGP+ H+CKTLIEPSRLI+VTAQRF+QTF
Sbjct: 346 DVLAKFTSNDDVIAIGDVFYADMEQDWVMQPGGPLAHKCKTLIEPSRLILVTAQRFIQTF 405

Query: 404 LGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESET 463
           LG NFIALHFRRHGFLKFCNAK PSCFYPIPQAADCI R+AERA APVIYLSTDAAESET
Sbjct: 406 LGKNFIALHFRRHGFLKFCNAKNPSCFYPIPQAADCIARVAERANAPVIYLSTDAAESET 465

Query: 464 SLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIG 523
            LLQSL+++NGKT+ LVKRP   S EKWDSLL RH +EDDSQVEAMLDKTI AMSNVFIG
Sbjct: 466 DLLQSLIIVNGKTVPLVKRPSHTSVEKWDSLLSRHGIEDDSQVEAMLDKTISAMSNVFIG 525

Query: 524 ASGSTFTEDIMRLRKDWGSTSLCDEYLCQGEEPNFIAEDE 563
           ASGSTFTEDI+RLRKDW S SLCDEYLCQGE PNFIAEDE
Sbjct: 526 ASGSTFTEDILRLRKDWESASLCDEYLCQGELPNFIAEDE 565

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297795837|ref|XP_002865803.1| hypothetical protein ARALYDRAFT_918074 [Arabidopsis lyrata subsp. lyrata] gi|297311638|gb|EFH42062.1| hypothetical protein ARALYDRAFT_918074 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225441959|ref|XP_002264087.1| PREDICTED: uncharacterized protein LOC100254979 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|15240670|ref|NP_199853.1| peptide-O-fucosyltransferase [Arabidopsis thaliana] gi|9758924|dbj|BAB09461.1| unnamed protein product [Arabidopsis thaliana] gi|133778858|gb|ABO38769.1| At5g50420 [Arabidopsis thaliana] gi|332008558|gb|AED95941.1| peptide-O-fucosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21595347|gb|AAM66093.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224071029|ref|XP_002303337.1| predicted protein [Populus trichocarpa] gi|222840769|gb|EEE78316.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297850124|ref|XP_002892943.1| hypothetical protein ARALYDRAFT_889130 [Arabidopsis lyrata subsp. lyrata] gi|297338785|gb|EFH69202.1| hypothetical protein ARALYDRAFT_889130 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449453409|ref|XP_004144450.1| PREDICTED: uncharacterized protein LOC101208722 [Cucumis sativus] gi|449517914|ref|XP_004165989.1| PREDICTED: uncharacterized protein LOC101230373 [Cucumis sativus] Back     alignment and taxonomy information
>gi|30685232|ref|NP_173170.2| peptide-O-fucosyltransferase [Arabidopsis thaliana] gi|27754290|gb|AAO22598.1| unknown protein [Arabidopsis thaliana] gi|332191445|gb|AEE29566.1| peptide-O-fucosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359482537|ref|XP_003632783.1| PREDICTED: uncharacterized protein LOC100254979 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query563
TAIR|locus:2177492566 AT5G50420 "AT5G50420" [Arabido 0.962 0.957 0.624 1.5e-184
TAIR|locus:2020432564 AT1G17270 "AT1G17270" [Arabido 0.955 0.953 0.593 1.4e-172
UNIPROTKB|Q8WR51424 pad-2 "GDP-fucose protein O-fu 0.133 0.176 0.320 0.00022
WB|WBGene00010757426 pad-2 [Caenorhabditis elegans 0.133 0.176 0.320 0.00022
TAIR|locus:2177492 AT5G50420 "AT5G50420" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1790 (635.2 bits), Expect = 1.5e-184, P = 1.5e-184
 Identities = 349/559 (62%), Positives = 424/559 (75%)

Query:    15 LIHQNDTKHGNHRLPTSDNNEDEEHNRRHSTFHIDDFPNAPPIRRRFTFDFKKLNNKRXX 74
             LI QNDT+   HR  +  +N       + S F IDD  +    R + +     LN +   
Sbjct:    15 LIPQNDTRI-RHREDSVSSNATTIGGNQRSAFQIDDILHRVQHRGKIS-----LNKRYVI 68

Query:    75 XXXXXXXXXXXXXXXVNLRSLFSGNYVNFRFDSLADRMRESELRAXXXXXXXXXXXXXXW 134
                             + R LF+ N+ +F+ D L++R++ESELRA              W
Sbjct:    69 VFVSLIISIGLLFLLTDPRELFAANFSSFKLDPLSNRVKESELRALYLLRQQQLALLSLW 128

Query:   135 NQSFVNNSYGNNTN----NPFFQEAKSVLLNQISLNRQIEQILLSPHKVSNF---TPNDA 187
             N + VN S   + N    +  F++ KS +  QISLN++I+++LLSPH+ SN+   T  D+
Sbjct:   129 NGTLVNPSLNQSENALGSSVLFEDVKSAVSKQISLNKEIQEVLLSPHRSSNYSGGTDVDS 188

Query:   188 V-WGLESCRKIDSIIPNKRTVEWKPKSDKFLFAICLSGQMSNHLICLEKHMFLAALLNRV 246
             V +    CRK+D  + +++TVEWKP+SDKFLFAICLSGQMSNHLICLEKHMF AALL+RV
Sbjct:   189 VNFSYNRCRKVDQKLSDRKTVEWKPRSDKFLFAICLSGQMSNHLICLEKHMFFAALLDRV 248

Query:   247 LVIPSSKFDYQYSRVLDIEHINDCLGRKVVVSFENFMEM-EKNHAHIDRFLCYFGLPQPC 305
             LVIPSSKFDYQY RV+DIE IN CLGR VVV+F+ F E  +KNH  IDRF+CYF  PQ C
Sbjct:   249 LVIPSSKFDYQYDRVIDIERINTCLGRNVVVAFDQFKEKAKKNHFRIDRFICYFSSPQLC 308

Query:   306 FVDDEHIKKLKQLGISM-GKTETVWKNEDTRKPSKRTVQDIEGKFKTDDDVIAVGDLFYA 364
             +VD+EHIKKLK LGIS+ GK E  W +ED +KPSKRTVQD++ KFK+DDDVIA+GD+FYA
Sbjct:   309 YVDEEHIKKLKGLGISIDGKLEAPW-SEDIKKPSKRTVQDVQMKFKSDDDVIAIGDVFYA 367

Query:   365 DVERDWVMQPGGPINHRCKTLIEPSRLIMVTAQRFVQTFLGSNFIALHFRRHGFLKFCNA 424
             D+E+DWVMQPGGPINH+CKTLIEPS+LI++TAQRF+QTFLG NFIALHFRRHGFLKFCNA
Sbjct:   368 DMEQDWVMQPGGPINHKCKTLIEPSKLILLTAQRFIQTFLGKNFIALHFRRHGFLKFCNA 427

Query:   425 KKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESETSLLQSLVVLNGKTIALVKRPP 484
             K PSCFYPIPQAA+CI R+ ER+   VIYLSTDAAESETSLLQSLVV++GK + LVKRPP
Sbjct:   428 KSPSCFYPIPQAAECIARIVERSNGAVIYLSTDAAESETSLLQSLVVVDGKIVPLVKRPP 487

Query:   485 RNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLRKDWGSTS 544
             RNSAEKWD+LLYRH +EDDSQV+AMLDKTICAMS+VFIGASGSTFTEDI+RLRKDWG++S
Sbjct:   488 RNSAEKWDALLYRHGIEDDSQVDAMLDKTICAMSSVFIGASGSTFTEDILRLRKDWGTSS 547

Query:   545 LCDEYLCQGEEPNFIAEDE 563
              CDEYLC+GEEPNFIAEDE
Sbjct:   548 TCDEYLCRGEEPNFIAEDE 566
GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0007020 "microtubule nucleation" evidence=RCA
TAIR|locus:2020432 AT1G17270 "AT1G17270" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8WR51 pad-2 "GDP-fucose protein O-fucosyltransferase 2" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00010757 pad-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.4.1.221LOW CONFIDENCE prediction!
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query563
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 3e-18
cd11298374 cd11298, O-FucT-2, GDP-fucose protein O-fucosyltra 6e-09
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 1e-04
cd11548287 cd11548, NodZ_like, Alpha 1,6-fucosyltransferase s 4e-04
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 7e-04
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information 
 Score = 83.2 bits (206), Expect = 3e-18
 Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 19/169 (11%)

Query: 379 NHRCKTLIEPSRLIMVTAQRFVQTFL---GSNFIALHFRRHGFLKFCNAKKPS---CFYP 432
                  +  S  I   A RFV+  L   G  ++A+H RR  F   C             
Sbjct: 42  IRLVGKHLRFSPEIRKLADRFVRKLLGLPGGPYLAVHLRRGDFEVECCHLAKWMGEYLEE 101

Query: 433 IPQAADCITR----LAERAKAPVIYLSTDAAESETSLLQSLVVLNGKTIALVKRPPRNSA 488
              +A+ I      L    K  V+Y++TD A+ E   L+  +   G  +           
Sbjct: 102 CLLSAEEIAEKIKELMAERKLKVVYVATDEADREE--LREELRKAGIRV-------VTKD 152

Query: 489 EKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLR 537
           +  +        + D+ + +++D+ IC+ ++VFIG   STF+ ++  LR
Sbjct: 153 DLLEDAELLELEKLDNYLLSLVDQEICSRADVFIGTGFSTFSSNVALLR 201

O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 206
>gnl|CDD|211384 cd11298, O-FucT-2, GDP-fucose protein O-fucosyltransferase 2 Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information
>gnl|CDD|211389 cd11548, NodZ_like, Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ Back     alignment and domain information
>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 563
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 100.0
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 98.22
PF01531298 Glyco_transf_11: Glycosyl transferase family 11; I 97.94
KOG3705580 consensus Glycoprotein 6-alpha-L-fucosyltransferas 92.58
PF03254476 XG_FTase: Xyloglucan fucosyltransferase; InterPro: 90.9
>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.4e-84  Score=646.83  Aligned_cols=291  Identities=22%  Similarity=0.380  Sum_probs=260.3

Q ss_pred             CCCCccccccCCCCeEEEEEcCC--CCcccchhhhhhhhHHHHHhcCEEecCCCcccc----------ccceeeechhhh
Q 008526          201 IPNKRTVEWKPKSDKFLFAICLS--GQMSNHLICLEKHMFLAALLNRVLVIPSSKFDY----------QYSRVLDIEHIN  268 (563)
Q Consensus       201 ~~~~~~~~w~p~~gy~l~cpCmg--GnqanHflcleg~l~FAk~LNRTLVLPPw~i~Y----------~f~~fFDVesL~  268 (563)
                      ++.-+..+||| |||++||||||  ||||||||   |+|+|||+||||||||| |++|          ||+.||+||+|+
T Consensus        18 ~~~~~~~~~DP-~GYl~yCPCMGRFGNQaDhFL---GsLAFAKaLnRTL~lPp-wiEy~~pe~~n~~vpf~~yF~vepl~   92 (386)
T KOG3849|consen   18 LPGMPAGSWDP-AGYLLYCPCMGRFGNQADHFL---GSLAFAKALNRTLVLPP-WIEYKHPETKNLMVPFEFYFQVEPLA   92 (386)
T ss_pred             cCCCccCCCCC-CccEEEccccccccchHHHHH---HHHHHHHHhcccccCCc-chhccCCcccccccchhheeecccHh
Confidence            34556788999 69999999999  99999999   99999999999999999 8888          599999999999


Q ss_pred             hhhCCcceeeHHHHHHHh-cCCCCC-Ce-eEEecC------CCCCCCCChHHHHHHhhhccCCCCcc-CCCCCCCCcCCC
Q 008526          269 DCLGRKVVVSFENFMEME-KNHAHI-DR-FLCYFG------LPQPCFVDDEHIKKLKQLGISMGKTE-TVWKNEDTRKPS  338 (563)
Q Consensus       269 ~y~~~~~VIemEeFmee~-~~~~pi-Dr-~yCY~~------~~~~C~~d~~~~~k~K~lG~~~Gnpf-pFWd~~~v~f~~  338 (563)
                      +||   |||||+|||+++ +.+||. .| .|||.+      ++.+|+        +|+     |||| ||||+++|+|..
T Consensus        93 ~Yh---RVitm~dFm~klapthwp~~~Rva~c~k~a~qr~pdkp~Ch--------~Ke-----GNPFGPfWDqfhvsFv~  156 (386)
T KOG3849|consen   93 KYH---RVITMQDFMKKLAPTHWPGTPRVAICDKSAAQRSPDKPGCH--------SKE-----GNPFGPFWDQFHVSFVG  156 (386)
T ss_pred             hhh---hheeHHHHHHHhCcccCCCCcceeeeehhhhccCCCCCCCc--------ccC-----CCCCCCchhheEeeeec
Confidence            999   999999999994 555555 45 599987      788999        999     9999 999999999999


Q ss_pred             cchhhhhhhccCCcchhhhhccccccchhhhcccC-----------CC----Cccccccc---ccccccHHHHHHHHHHH
Q 008526          339 KRTVQDIEGKFKTDDDVIAVGDLFYADVERDWVMQ-----------PG----GPINHRCK---TLIEPSRLIMVTAQRFV  400 (563)
Q Consensus       339 s~~~~~ll~kf~~~~~l~~Igd~F~~~~~~~W~~~-----------~G----~Pv~~k~r---kyL~wS~~I~~~A~~fI  400 (563)
                      +++++++-            .|.-+...+++|.++           +|    ||++.+++   |||+||++|+++|++||
T Consensus       157 sE~f~~i~------------Fd~~~~~~~~kW~~kfp~eeyPVLAf~gAPA~FPv~~e~~~lQkYl~WS~r~~e~~k~fI  224 (386)
T KOG3849|consen  157 SEYFGDIG------------FDLNQMGSRKKWLEKFPSEEYPVLAFSGAPAPFPVKGEVWSLQKYLRWSSRITEQAKKFI  224 (386)
T ss_pred             cccccccc------------cchhhcchHHHHHhhCCcccCceeeecCCCCCCccccccccHHHHHHHHHHHHHHHHHHH
Confidence            99999664            344444456889877           45    66899887   99999999999999999


Q ss_pred             HHhhCCCcEEeeeec-hhhhhhccCCC----------CC---------------CCCChHHHHHHHHHHHHHcC-CCEEE
Q 008526          401 QTFLGSNFIALHFRR-HGFLKFCNAKK----------PS---------------CFYPIPQAADCITRLAERAK-APVIY  453 (563)
Q Consensus       401 ~~aLggpYIgVHLRR-~DF~~ac~~~v----------Ps---------------C~psi~~aa~qI~~~vk~~~-lk~VF  453 (563)
                      +..|.+||||||||+ .||+++|++.+          ||               |.|+.++|.+||+++++.++ +++||
T Consensus       225 ~a~L~rpfvgiHLRng~DWvraCehikd~~~~hlfASpQClGy~~~~gaLt~e~C~Psk~~I~rqik~~v~si~dakSVf  304 (386)
T KOG3849|consen  225 SANLARPFVGIHLRNGADWVRACEHIKDTTNRHLFASPQCLGYGHHLGALTKEICSPSKQQILRQIKEKVGSIGDAKSVF  304 (386)
T ss_pred             HHhcCcceeEEEeecCchHHHHHHHhcccCCCccccChhhccccccccccchhhhCccHHHHHHHHHHHHhhhcccceEE
Confidence            999999999999999 89999999832          44               99999999999999999996 99999


Q ss_pred             EecCCChhhHHHHHHHHhhcCceeEEEeCCCCCCchhhhhHhhhccCCCchhHHHHHhHHHHhcCCccccccccccchHH
Q 008526          454 LSTDAAESETSLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDI  533 (563)
Q Consensus       454 IATDA~~~E~~eLk~lL~~~g~~v~vv~r~~~~~~e~~~~ll~kdg~~~Dg~vvAiIDq~Ica~A~~FIGtc~STFS~~I  533 (563)
                      ||||. +++++||+.+|++ + .+.|++++|                    + ++.+|++|++|||||||||+||||+++
T Consensus       305 VAsDs-~hmi~Eln~aL~~-~-~i~vh~l~p--------------------d-d~y~dLaIlGqadhFiGNCvSsfsafv  360 (386)
T KOG3849|consen  305 VASDS-DHMIDELNEALKP-Y-EIEVHRLEP--------------------D-DMYTDLAILGQADHFIGNCVSSFSAFV  360 (386)
T ss_pred             Eeccc-hhhhHHHHHhhcc-c-ceeEEecCc--------------------c-cchhhhhhhcccchhhhhhHHHHHHHH
Confidence            99999 8999999998874 4 466888775                    3 577899999999999999999999999


Q ss_pred             HHHHHhcCCCCCccc
Q 008526          534 MRLRKDWGSTSLCDE  548 (563)
Q Consensus       534 krERdl~G~pSsf~e  548 (563)
                      |||||..|+||.|.+
T Consensus       361 KRERD~~GrPS~FfG  375 (386)
T KOG3849|consen  361 KRERDHAGRPSAFFG  375 (386)
T ss_pred             hhhhcccCCcchhcc
Confidence            999999999999987

>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information
>PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>KOG3705 consensus Glycoprotein 6-alpha-L-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03254 XG_FTase: Xyloglucan fucosyltransferase; InterPro: IPR004938 Plant cell walls are crucial for development, signal transduction, and disease resistance in plants Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query563
4ap5_A408 Crystal Structure Of Human Pofut2 Length = 408 6e-04
4ap6_A422 Crystal Structure Of Human Pofut2 E54a Mutant In Co 6e-04
>pdb|4AP5|A Chain A, Crystal Structure Of Human Pofut2 Length = 408 Back     alignment and structure 
Iteration: 1

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 404 LGSNFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCITRLAERAKAPVIYLSTDAAESET 463
           LG  ++ +H RR  F+       PS    +  A   I  L +  +   ++++TDA   E 
Sbjct: 263 LGGPYLGVHLRRKDFIWGHRQDVPS----LEGAVRKIRSLMKTHRLDKVFVATDAVRKEY 318
Query: 464 SLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIG 523
             L+ L+        +V+  P      W+ L     L  D  V A++D+ ICA +  FIG
Sbjct: 319 EELKKLLP------EMVRFEP-----TWEEL----ELYKDGGV-AIIDQWICAHARFFIG 362
Query: 524 ASGSTFT 530
            S STF+
Sbjct: 363 TSVSTFS 369
>pdb|4AP6|A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose Length = 422 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query563
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 3e-36
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 4e-25
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Length = 362 Back     alignment and structure
 Score =  137 bits (347), Expect = 3e-36
 Identities = 55/389 (14%), Positives = 110/389 (28%), Gaps = 87/389 (22%)

Query: 205 RTVEWKPKSDKFLFAICLSGQMSNHLICLEKHMFLAALLNRVLVIPS-SKFDYQYSRVLD 263
                 P     +F  C  G+  N +      +  A  L+R LV+P+  +F +  ++++ 
Sbjct: 1   EAEATDPNG-YIVFCPC-MGRFGNQVDQFLGVLAFAKALDRTLVLPNFIEFKHPETKMIP 58

Query: 264 IEH---INDCLGRKVVVSFENFME-MEKNHAHIDRFLCYFGLPQPCFVDDEHIKKLKQLG 319
            E    +        VV+ + F + +       ++   +   P+    D           
Sbjct: 59  FEFLFQVGTVAKYTRVVTMQEFTKKIMPTVWPPEKRKAFCWTPRQAIYDKSAEPGCHSK- 117

Query: 320 ISMGKTETVWKNEDTRKPSKRTVQDIEGKFKTDDDVIAVGDLFYADVERDWVMQ------ 373
                    W   D          DI G F          DL      + W+ +      
Sbjct: 118 -EGNPFGPYWDQIDVSFVGDEYFGDIPGGF----------DLNQMGSRKKWLEKFPSEEY 166

Query: 374 ------------PGGPINHRCKTLIEPSRLIMVTAQRFVQTFLGSNFIALHFRRHG-FLK 420
                       P        +  +  S  I   A++F+   L   F+A+H R    +++
Sbjct: 167 PVLAFSSAPAPFPSKGKVWSIQKYLRWSSRITEQAKKFISANLAKPFVAVHLRNDADWVR 226

Query: 421 FCNAKKPS-------------------------CFYPIPQAADCITRLAERAKAPVIYLS 455
            C     +                         C     Q  + I        A  ++++
Sbjct: 227 VCEHIDTTTNRPLFASEQCLGEGHHLGTLTKEICSPSKQQILEQIVEKVGSIGAKSVFVA 286

Query: 456 TDAAESETSLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTIC 515
           +D       + ++L       I   ++ P +                           I 
Sbjct: 287 SDKDHMIDEINEALKPYE---IEAHRQEPDD---------------------MYTSLAIM 322

Query: 516 AMSNVFIGASGSTFTEDIMRLRKDWGSTS 544
             +++F+G   STF+  + R R   G + 
Sbjct: 323 GRADLFVGNCVSTFSHIVKRERDHAGQSP 351
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Length = 408 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query563
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 100.0
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 100.0
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 99.16
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 99.09
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
Probab=100.00  E-value=1.8e-90  Score=710.95  Aligned_cols=287  Identities=18%  Similarity=0.336  Sum_probs=248.9

Q ss_pred             ccccCCCCeEEEEEcCC--CCcccchhhhhhhhHHHHHhcCEEecCCCcccc--------ccceeeechhhhhhhCCcce
Q 008526          207 VEWKPKSDKFLFAICLS--GQMSNHLICLEKHMFLAALLNRVLVIPSSKFDY--------QYSRVLDIEHINDCLGRKVV  276 (563)
Q Consensus       207 ~~w~p~~gy~l~cpCmg--GnqanHflcleg~l~FAk~LNRTLVLPPw~i~Y--------~f~~fFDVesL~~y~~~~~V  276 (563)
                      -+||| |||+|||||||  ||||||||   |+|+|||+||||||||| ||+|        ||++||+|++|++||   +|
T Consensus         3 ~~~d~-~Gyi~yCPCMGRFGNQadhfL---G~LafAk~lnRTLvlPp-wi~y~~~~~~~vpf~~yF~v~~l~~yh---rv   74 (362)
T 3zy2_A            3 EATDP-NGYIVFCPCMGRFGNQVDQFL---GVLAFAKALDRTLVLPN-FIEFKHPETKMIPFEFLFQVGTVAKYT---RV   74 (362)
T ss_dssp             -CCCT-TCEEEECCCSSSHHHHHHHHH---HHHHHHHHHTCEEECCC-EEECSSSSCEEECHHHHBCHHHHTTTS---CE
T ss_pred             CccCC-CccEEeCCCcCccccHHHHHH---HHHHHHHhhCceEecCc-cccccCCcccccchhheeecchhhhhc---ee
Confidence            47999 79999999999  99999999   99999999999999999 7877        599999999999999   99


Q ss_pred             eeHHHHHHH-hcCCCCCC-e-eEEecC--------CCCCCCCChHHHHHHhhhccCCCCcc-CCCCCCCCcCCCcchhhh
Q 008526          277 VSFENFMEM-EKNHAHID-R-FLCYFG--------LPQPCFVDDEHIKKLKQLGISMGKTE-TVWKNEDTRKPSKRTVQD  344 (563)
Q Consensus       277 IemEeFmee-~~~~~piD-r-~yCY~~--------~~~~C~~d~~~~~k~K~lG~~~Gnpf-pFWd~~~v~f~~s~~~~~  344 (563)
                      |+|||||++ ++.+||++ | .|||+.        ++++|+        ||+     |||| ||||+++|+|.+++++++
T Consensus        75 i~me~Fm~~lap~~WP~~~R~~~C~~~~~~~~~~~~~~~C~--------~K~-----GNPFgpfWd~f~v~F~~se~~~~  141 (362)
T 3zy2_A           75 VTMQEFTKKIMPTVWPPEKRKAFCWTPRQAIYDKSAEPGCH--------SKE-----GNPFGPYWDQIDVSFVGDEYFGD  141 (362)
T ss_dssp             ECHHHHHHHTHHHHSCGGGCEEEESSCBC-------CCBCC--------TTS-----STTHHHHHHHTTCCCCEEEECTT
T ss_pred             eeHHHHHHHhccccCCcccceEeeccccccccCCCCCCCCC--------CCC-----CCCCCcchhccccccccceeccC
Confidence            999999999 56555555 5 699984        345899        999     9999 999999999999999985


Q ss_pred             hhhccCCcchhhhhccccc-cchhhhcccC-----------CC----Cccccccc---ccccccHHHHHHHHHHHHHhhC
Q 008526          345 IEGKFKTDDDVIAVGDLFY-ADVERDWVMQ-----------PG----GPINHRCK---TLIEPSRLIMVTAQRFVQTFLG  405 (563)
Q Consensus       345 ll~kf~~~~~l~~Igd~F~-~~~~~~W~~~-----------~G----~Pv~~k~r---kyL~wS~~I~~~A~~fI~~aLg  405 (563)
                      .-.           |..|. .++.++|.++           +|    ||++.+++   |||+||++|+++|++||+++|+
T Consensus       142 ~~~-----------~l~~~~~~~~~~W~~~~p~~~~pVlAf~gaPa~FPv~~e~r~LqkYm~WS~~i~~~a~~fI~~~L~  210 (362)
T 3zy2_A          142 IPG-----------GFDLNQMGSRKKWLEKFPSEEYPVLAFSSAPAPFPSKGKVWSIQKYLRWSSRITEQAKKFISANLA  210 (362)
T ss_dssp             STT-----------TTCC-------CHHHHSCTTTCSEEEESSCSSCSSCCGGGGGGGGGCCBCHHHHHHHHHHHHHHCC
T ss_pred             ccc-----------cccccchhHHHHHHHhCCcccCceEeecCCCCCCCcChhhHhHHHhccccHHHHHHHHHHHHHhcC
Confidence            321           24454 5567888866           45    77899998   9999999999999999999999


Q ss_pred             CCcEEeeeec-hhhhhhccCCC----------CC---------------CCCChHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008526          406 SNFIALHFRR-HGFLKFCNAKK----------PS---------------CFYPIPQAADCITRLAERAKAPVIYLSTDAA  459 (563)
Q Consensus       406 gpYIgVHLRR-~DF~~ac~~~v----------Ps---------------C~psi~~aa~qI~~~vk~~~lk~VFIATDA~  459 (563)
                      +||||||||| .||+++|++..          ||               |+||+++|++||+++++++++++||||||++
T Consensus       211 rpyVgIHLR~G~DW~~aC~hlk~~~~~~lfaSPQC~Gy~~~~~~lt~emClPSle~I~rqIk~~vk~~~lksVFIATDa~  290 (362)
T 3zy2_A          211 KPFVAVHLRNDADWVRVCEHIDTTTNRPLFASEQCLGEGHHLGTLTKEICSPSKQQILEQIVEKVGSIGAKSVFVASDKD  290 (362)
T ss_dssp             SSEEEEEECCCHHHHHHHHTCCTTTCCCCTTTHHHHCGGGTTCCCCHHHHSCCHHHHHHHHHHHHHHHTCSEEEEEESSC
T ss_pred             CCeEEEEEecCCcHHHHHhhhccccCcccccCCcccCCcccCcccchhccCCCHHHHHHHHHHHHHhcCCcEEEEecCCH
Confidence            9999999999 59999999721          43               7899999999999999999999999999995


Q ss_pred             hhhHHHHHHHHhhcCceeEEEeCCCCCCchhhhhHhhhccCCCchhHHHHHhHHHHhcCCccccccccccchHHHHHHHh
Q 008526          460 ESETSLLQSLVVLNGKTIALVKRPPRNSAEKWDSLLYRHHLEDDSQVEAMLDKTICAMSNVFIGASGSTFTEDIMRLRKD  539 (563)
Q Consensus       460 ~~E~~eLk~lL~~~g~~v~vv~r~~~~~~e~~~~ll~kdg~~~Dg~vvAiIDq~Ica~A~~FIGtc~STFS~~IkrERdl  539 (563)
                       +|++|||++|+  +..++|+++.+                    + +||||||||+||+||||||+||||++|+|||++
T Consensus       291 -~~~~ELk~~L~--~~~v~vv~~~p--------------------e-~a~ID~~I~~~A~~FIGN~~SSFSa~I~rERdi  346 (362)
T 3zy2_A          291 -HMIDEINEALK--PYEIEAHRQEP--------------------D-DMYTSLAIMGRADLFVGNCVSTFSHIVKRERDH  346 (362)
T ss_dssp             -CCHHHHHHHHG--GGTCCEECCSS--------------------C-CHHHHHHHHHHSSEEEECTTCHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHhh--ccCceEEEeCC--------------------c-hhHHHHHHHHhCCEeecCccccccHHHHHHHHh
Confidence             59999999997  33455666654                    4 699999999999999999999999999999999


Q ss_pred             cC---CCCCcccc
Q 008526          540 WG---STSLCDEY  549 (563)
Q Consensus       540 ~G---~pSsf~e~  549 (563)
                      +|   +||+|++.
T Consensus       347 ~G~~~~ps~Ffg~  359 (362)
T 3zy2_A          347 AGQSPRPSAFFGI  359 (362)
T ss_dssp             SSSSCCCEEETTC
T ss_pred             cCCCCCCccccCC
Confidence            99   99999873
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00