Citrus Sinensis ID: 008592
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 560 | 2.2.26 [Sep-21-2011] | |||||||
| Q5N9X2 | 579 | Laccase-4 OS=Oryza sativa | yes | no | 0.944 | 0.913 | 0.670 | 0.0 | |
| Q9FJD5 | 577 | Laccase-17 OS=Arabidopsis | yes | no | 0.935 | 0.908 | 0.673 | 0.0 | |
| Q10ND7 | 578 | Laccase-10 OS=Oryza sativ | no | no | 0.928 | 0.899 | 0.668 | 0.0 | |
| Q0DHL2 | 574 | Laccase-12/13 OS=Oryza sa | no | no | 0.975 | 0.951 | 0.649 | 0.0 | |
| O81081 | 573 | Laccase-2 OS=Arabidopsis | no | no | 0.957 | 0.935 | 0.625 | 0.0 | |
| Q0DHL5 | 540 | Putative laccase-11 OS=Or | no | no | 0.912 | 0.946 | 0.615 | 0.0 | |
| Q5N9W4 | 547 | Putative laccase-5 OS=Ory | no | no | 0.875 | 0.895 | 0.601 | 0.0 | |
| Q0IQU1 | 564 | Laccase-22 OS=Oryza sativ | no | no | 0.955 | 0.948 | 0.546 | 0.0 | |
| O80434 | 558 | Laccase-4 OS=Arabidopsis | no | no | 0.951 | 0.955 | 0.544 | 0.0 | |
| Q8VZA1 | 557 | Laccase-11 OS=Arabidopsis | no | no | 0.953 | 0.958 | 0.547 | 0.0 |
| >sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/559 (67%), Positives = 443/559 (79%), Gaps = 30/559 (5%)
Query: 30 LAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYN 89
+ + +GITRHY+F+++M N TRLC TKS+VTVNGQ PGP ++AREGDR++IRV NNV +N
Sbjct: 23 IVQAQGITRHYEFNVQMANATRLCNTKSMVTVNGQCPGPELVAREGDRVVIRVTNNVAHN 82
Query: 90 VTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLY 149
+++HWHGVRQ+R+GWADGPAY+TQCPIQTGQSYVYNFTV GQRGTL+WHAHISWLRAT+Y
Sbjct: 83 ISLHWHGVRQVRTGWADGPAYITQCPIQTGQSYVYNFTVAGQRGTLWWHAHISWLRATVY 142
Query: 150 GPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLP 209
G ++ILPK YPFP P +EVP+IFGEWW ADTE ++N+A+QTGG PN+SDAFTINGLP
Sbjct: 143 GALVILPKLGVPYPFPAPHKEVPVIFGEWWNADTEEVVNQAVQTGGGPNVSDAFTINGLP 202
Query: 210 GPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVY------- 262
GP YNC+A+DTFKLKV PGKTY+LR+INAALN+ELFF++ANHTLT+VE DAVY
Sbjct: 203 GPLYNCSAQDTFKLKVKPGKTYMLRLINAALNEELFFAVANHTLTVVEVDAVYVKPFTVD 262
Query: 263 ---------------AKSKAPNANFLIAARPYATG-PASFDNTTTAGVLEYDQP-----N 301
AK P ANF ++A PY+T P +F NTT AG+LEY+ P
Sbjct: 263 TLVISPGQTTNVLLTAKPYYPGANFYMSAAPYSTARPGTFGNTTVAGILEYENPAMSPSA 322
Query: 302 GITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGL 361
K LPL KP LP+ NDT+FV F+ K+RSLAT ++PA VP VD+RFFFTVGLG
Sbjct: 323 ASFVKGLPLFKPT--LPQLNDTDFVTNFTDKLRSLATPEYPAAVPQSVDKRFFFTVGLGT 380
Query: 362 SPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNY 421
PCP N TCQGPNNT++AAS+NNVSFV P ALLQ+HF S GVY DFP P FNY
Sbjct: 381 LPCPANMTCQGPNNTQMAASMNNVSFVLPARALLQSHFTGLSSGVYAPDFPVAPLSPFNY 440
Query: 422 TGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFD 481
TGTPP+N V +GTK++VL +N SVE+VMQDTSI+ ESHPLHLHGFNFFV+ QGFGN+D
Sbjct: 441 TGTPPNNTNVKTGTKLLVLRYNTSVELVMQDTSILGIESHPLHLHGFNFFVIGQGFGNYD 500
Query: 482 PNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541
DPAKFNLVDP ERNTVGVP+GGWVAIRFLADNPGVWFMHCHLE HT+WGL+MAW+V
Sbjct: 501 AVNDPAKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVL 560
Query: 542 DGKGPKQKLPPPPSDLPKC 560
DG P QKL PPPSDLPKC
Sbjct: 561 DGSHPNQKLLPPPSDLPKC 579
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 2 |
| >sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/558 (67%), Positives = 446/558 (79%), Gaps = 34/558 (6%)
Query: 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHW 94
GITRHY IKMQN+TRLC TKS+V+VNGQFPGP++IAREGD++LI+V+N V N+++HW
Sbjct: 22 GITRHYTLEIKMQNVTRLCHTKSLVSVNGQFPGPKLIAREGDQVLIKVVNQVPNNISLHW 81
Query: 95 HGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIII 154
HG+RQLRSGWADGPAY+TQCPIQTGQSYVYN+T+ GQRGTL++HAHISWLR+T+YGP+II
Sbjct: 82 HGIRQLRSGWADGPAYITQCPIQTGQSYVYNYTIVGQRGTLWYHAHISWLRSTVYGPLII 141
Query: 155 LPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYN 214
LPK+ YPF +P +EVP+IFGEW+ ADTE II +A QTGG PN+SDA+TINGLPGP YN
Sbjct: 142 LPKRGVPYPFAKPHKEVPMIFGEWFNADTEAIIRQATQTGGGPNVSDAYTINGLPGPLYN 201
Query: 215 CAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYA----------- 263
C+AKDTF+L+V PGKTYLLR+INAALNDELFFSIANHT+T+VE DA+Y
Sbjct: 202 CSAKDTFRLRVKPGKTYLLRLINAALNDELFFSIANHTVTVVEADAIYVKPFETETILIA 261
Query: 264 -----------KSKAPNANFLIAARPYATGPASFDNTTTAGVLEYDQP-------NGITT 305
KS P+A+F + ARPY TG +FDN+T AG+LEY+ P + +
Sbjct: 262 PGQTTNVLLKTKSSYPSASFFMTARPYVTGQGTFDNSTVAGILEYEPPKQTKGAHSRTSI 321
Query: 306 KNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPC- 364
KNL L KP ILP NDTNF +FS K+RSL + FPA VP+ VDR+FFFTVGLG +PC
Sbjct: 322 KNLQLFKP--ILPALNDTNFATKFSNKLRSLNSKNFPANVPLNVDRKFFFTVGLGTNPCN 379
Query: 365 -PQNQTCQGPNNTKL-AASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYT 422
NQTCQGP NT + AAS++N+SF P ALLQ+H+ +S GVY+ FP +P FNYT
Sbjct: 380 HKNNQTCQGPTNTTMFAASISNISFTMPTKALLQSHYSGQSHGVYSPKFPWSPIVPFNYT 439
Query: 423 GTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDP 482
GTPP+N MVS+GT ++VLP+N SVE+VMQDTSI+ AESHPLHLHGFNFFVV QGFGNFDP
Sbjct: 440 GTPPNNTMVSNGTNLMVLPYNTSVELVMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDP 499
Query: 483 NKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542
NKDP FNLVDP ERNTVGVPSGGW AIRFLADNPGVWFMHCHLEVHTSWGL+MAW+V D
Sbjct: 500 NKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLEVHTSWGLRMAWLVLD 559
Query: 543 GKGPKQKLPPPPSDLPKC 560
G P QKL PPP+DLPKC
Sbjct: 560 GDKPDQKLLPPPADLPKC 577
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/552 (66%), Positives = 442/552 (80%), Gaps = 32/552 (5%)
Query: 37 TRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHG 96
TR+Y F++K+QN+TRLC T++I TVNG+FPGP+I+ REGDR++++V+NN+K N+TIHWHG
Sbjct: 31 TRYYTFNVKLQNVTRLCNTRAIPTVNGKFPGPKIVTREGDRVVVKVVNNIKDNITIHWHG 90
Query: 97 VRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIIILP 156
VRQ+R+GW+DGPAYVTQCPIQTGQSYVYNFT+ GQRGTLFWHAH+SWLR+TLYGPIIILP
Sbjct: 91 VRQMRTGWSDGPAYVTQCPIQTGQSYVYNFTINGQRGTLFWHAHVSWLRSTLYGPIIILP 150
Query: 157 KQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCA 216
K PF +P ++VPIIFGEW+ AD E I+ +A+QTGG PN+SDA+TINGLPGP YNC+
Sbjct: 151 KAGLPLPFTEPHKDVPIIFGEWFNADPEAIVAQALQTGGGPNVSDAYTINGLPGPLYNCS 210
Query: 217 AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAK------------ 264
+KDTF+LKV PGK YLLR+INAALNDELFFS+ANHTLT+V+ DA Y K
Sbjct: 211 SKDTFRLKVQPGKMYLLRLINAALNDELFFSVANHTLTVVDVDASYVKPFDTDVVLITPG 270
Query: 265 ------------SKAPNANFLIAARPYATG-PASFDNTTTAGVLEYDQPNGITTKNLPLL 311
++A A L+ ARPYATG P ++DNTT A VLEY P I K+LPLL
Sbjct: 271 QTTNVLLRAKPTAEAAGATHLMMARPYATGRPGTYDNTTVAAVLEYAPPGHI--KSLPLL 328
Query: 312 KPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCP--QNQT 369
+P+ LP NDT F F+ K+RSLA +P+ VP +VD+ FFF VGLG +PCP NQT
Sbjct: 329 RPS--LPALNDTAFAAGFAAKLRSLACPDYPSNVPRRVDKPFFFAVGLGTTPCPGSNNQT 386
Query: 370 CQGP-NNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSN 428
CQGP N TK AS+NNVSF P ALLQAH+ +S GVYT DFPA+P FNYTGTPP+N
Sbjct: 387 CQGPTNTTKFTASINNVSFDMPTTALLQAHYTGQSAGVYTADFPASPLEPFNYTGTPPNN 446
Query: 429 IMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAK 488
VS+GT+VVVLP+NASVEVV+QDTSI+ AESHPLHLHGF+FFVV QG GN+DP+K PA+
Sbjct: 447 TNVSNGTRVVVLPYNASVEVVLQDTSILGAESHPLHLHGFDFFVVGQGTGNYDPSKHPAE 506
Query: 489 FNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQ 548
FNLVDP +RNTVGVP+GGWVAIRF ADNPGVWFMHCHLEVHT+WGLKMAW+VNDG P+Q
Sbjct: 507 FNLVDPVQRNTVGVPAGGWVAIRFFADNPGVWFMHCHLEVHTTWGLKMAWVVNDGPLPEQ 566
Query: 549 KLPPPPSDLPKC 560
KL PPPSDLP C
Sbjct: 567 KLMPPPSDLPMC 578
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/576 (64%), Positives = 440/576 (76%), Gaps = 30/576 (5%)
Query: 9 SAILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGP 68
S++LR L AL LS + E ITR Y F ++ ++TRLC TKSIVTVNGQ+PGP
Sbjct: 5 SSVLRCCLL-VAALMTLSAMGA---EAITRQYLFDVQTTSVTRLCSTKSIVTVNGQYPGP 60
Query: 69 RIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTV 128
+ AREGD + + V+N+ YN++IHWHG+RQL SGWADGP+Y+TQCPIQ G SYVY FT+
Sbjct: 61 TLFAREGDHVEVTVVNHSPYNMSIHWHGIRQLLSGWADGPSYITQCPIQPGGSYVYRFTI 120
Query: 129 TGQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIIN 188
TGQRGTL+WHAHISWLRAT++GP++ILP YPFP P EEVPI+FGEWW DTE +I+
Sbjct: 121 TGQRGTLWWHAHISWLRATVHGPMVILPPAGVGYPFPAPHEEVPIMFGEWWNNDTEAVIS 180
Query: 189 EAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSI 248
+A+QTGG PNISDA+T+NGLPGP YNC+A+DTFKLKV PGKTY+LR+INAALNDELFFSI
Sbjct: 181 QALQTGGGPNISDAYTLNGLPGPLYNCSAQDTFKLKVKPGKTYMLRLINAALNDELFFSI 240
Query: 249 ANHTLTIVETDAVY----------------------AKSKAPNANFLIAARPYATGPASF 286
ANHTLT+V+ DA+Y AK P A++ + ARPY T +F
Sbjct: 241 ANHTLTVVDVDALYVKPFTVDTLIIAPGQTSNVLLTAKPTYPGASYYMLARPYTTTQGTF 300
Query: 287 DNTTTAGVLEYDQPNGITT--KNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAK 344
DNTT AGVLEYD P T K +P+ P LP+ NDTN V F+ K+RSLA+A +PA
Sbjct: 301 DNTTVAGVLEYDDPCPTTAAGKIVPIFSPT--LPQINDTNAVSNFTAKLRSLASAGYPAA 358
Query: 345 VPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSK 404
VP +VD RFFFTVGLG PC N TCQGPN ++ AAS+NNVSFV P ALLQ+HF +SK
Sbjct: 359 VPQQVDHRFFFTVGLGTHPCAVNGTCQGPNGSRFAASINNVSFVLPATALLQSHFAGKSK 418
Query: 405 GVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLH 464
GVY ++FP P FNYTGTPP+N V +GTKV+VLP+ A+VE+VMQDTSI+ AESHPLH
Sbjct: 419 GVYASNFPYYPLNPFNYTGTPPNNTNVMNGTKVLVLPYGANVELVMQDTSILGAESHPLH 478
Query: 465 LHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHC 524
LHGFNFFVV QGFGNFDP DPAKFNL DP ERNTVGVP+GGWVAIRF ADNPGVWFMHC
Sbjct: 479 LHGFNFFVVGQGFGNFDPINDPAKFNLYDPVERNTVGVPAGGWVAIRFHADNPGVWFMHC 538
Query: 525 HLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
HLEVH SWGLKMAW+V DG P QKLPPPP DLPKC
Sbjct: 539 HLEVHMSWGLKMAWLVLDGSRPDQKLPPPPLDLPKC 574
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|O81081|LAC2_ARATH Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/563 (62%), Positives = 435/563 (77%), Gaps = 27/563 (4%)
Query: 22 LWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIR 81
L+ +S A GITRHY+F I+++NITRLC+TK+IVTVNG+FPGPR+ AREGD L I+
Sbjct: 14 LFAISYNIDAASAGITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIK 73
Query: 82 VINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI 141
V+N+V N++IHWHG+RQLRSGWADGP+YVTQCPI+ GQSYVYNFTVTGQRGTL+WHAHI
Sbjct: 74 VVNHVSNNISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTGQRGTLWWHAHI 133
Query: 142 SWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISD 201
W+RAT+YGP+IILPK YPFP+P+++VPI+FGEW+ AD + ++ +A+QTG PN SD
Sbjct: 134 QWMRATVYGPLIILPKLHQPYPFPKPYKQVPILFGEWFNADPQAVVQQALQTGAGPNASD 193
Query: 202 AFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAV 261
A T NGLPGP YNC+ KDT+KL V PGKTYLLR+INAALNDELFF+IANHTLT+VE DA
Sbjct: 194 AHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADAC 253
Query: 262 YAKSKA----------------------PNANFLIAARPYATGPASFDNTTTAGVLEYDQ 299
Y K PNA F + ARPY TG + DNTT AG+L+Y Q
Sbjct: 254 YVKPFQTNIVLLGPGQTTNVLLKTKPIYPNATFYMLARPYFTGQGTIDNTTVAGILQY-Q 312
Query: 300 PNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGL 359
+ ++KNL ++KP+ LP N T++ F+K RSLA++ FPA VP VD+++FF +GL
Sbjct: 313 HHTKSSKNLSIIKPS--LPPINSTSYAANFTKMFRSLASSTFPANVPKVVDKQYFFAIGL 370
Query: 360 GLSPCPQNQTCQGP-NNTKLAASVNNVSFVQPN-VALLQAHFFNRSKGVYTTDFPANPPF 417
G +PCP+NQTCQGP N TK AAS+NNVSF+ PN +LLQ++F +SK V+ TDFP P
Sbjct: 371 GTNPCPKNQTCQGPTNTTKFAASINNVSFILPNKTSLLQSYFVGKSKNVFMTDFPTAPII 430
Query: 418 KFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGF 477
FNYTGTPP+N MVS GTKVVVL + +VE+V+Q TSI+ E+HP+HLHGFNF+VV QGF
Sbjct: 431 PFNYTGTPPNNTMVSRGTKVVVLKYKTTVELVLQGTSILGIEAHPIHLHGFNFYVVGQGF 490
Query: 478 GNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMA 537
GNF+P +DP +NLVDP ERNT+ +PSGGWVAIRFLADNPGVW MHCH+E+H SWGL MA
Sbjct: 491 GNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMA 550
Query: 538 WIVNDGKGPKQKLPPPPSDLPKC 560
W+V DG P QKL PPPSD PKC
Sbjct: 551 WVVLDGDLPNQKLLPPPSDFPKC 573
|
Lignin degradation and detoxification of lignin-derived products (By similarity). Required for root elongation in dehydration conditions. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2 | Back alignment and function description |
|---|
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/543 (61%), Positives = 402/543 (74%), Gaps = 32/543 (5%)
Query: 46 MQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWA 105
M +TRLC TKS+ TVNGQFPGP+++ REGD L+IRV NN+ NVT HWHG+RQ+RSGWA
Sbjct: 1 MATVTRLCVTKSVPTVNGQFPGPKLVVREGDTLVIRVTNNINNNVTFHWHGIRQVRSGWA 60
Query: 106 DGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFP 165
DGPAY+TQCPI++G SYVY FTVTGQRGTL+WHAH SWLRATLYGP++ILP + +YPFP
Sbjct: 61 DGPAYITQCPIRSGGSYVYRFTVTGQRGTLWWHAHFSWLRATLYGPLVILPPRGVAYPFP 120
Query: 166 QPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAK-DTFKLK 224
+P EVP++ GEW+ AD E +I +A+QTGG PN+SDA+T NGLPGP YNC++ DTFKL+
Sbjct: 121 KPHREVPLLLGEWFNADPEAVIKQALQTGGGPNVSDAYTFNGLPGPTYNCSSSNDTFKLR 180
Query: 225 VTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKSKA----------------- 267
V PGKTYLLR+INAALNDELFF +ANHTL +V+ DA Y K A
Sbjct: 181 VRPGKTYLLRLINAALNDELFFGVANHTLMVVQADASYVKPFAATALVISPGQTMDVLLT 240
Query: 268 ------PNANFLIAARPYATGPASFDNTTTAGVLEY--DQPNGITTKNLPLLKPAAILPK 319
P+ +F IA PY +FDNTT VLEY + ++LPL LP
Sbjct: 241 AAANNPPSRSFAIAVAPYTNTVGTFDNTTAVAVLEYYGAATSAAALRSLPLPS----LPA 296
Query: 320 FNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPC--PQNQTCQGPNNTK 377
+NDT V FS RSLA+A++PA+VP VDR FFF VGLG PC P N TCQGPNNT+
Sbjct: 297 YNDTGAVANFSASFRSLASAQYPARVPRTVDRHFFFAVGLGADPCQSPVNGTCQGPNNTR 356
Query: 378 LAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKV 437
AAS+NNVSFV P +LLQAH+ R GV +FPA P FNYTGTPP+N V+ GT+V
Sbjct: 357 FAASMNNVSFVMPRTSLLQAHYQRRYNGVLAANFPAAPRTPFNYTGTPPNNTFVTHGTRV 416
Query: 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAER 497
V L FN +VEVV+QDTSI+ AESHPLHLHG++F+VV GFGN+D + D AK+NLVDP +R
Sbjct: 417 VPLSFNTTVEVVLQDTSILGAESHPLHLHGYDFYVVGTGFGNYDASNDTAKYNLVDPVQR 476
Query: 498 NTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDL 557
NT+ VP+ GWVAIRF+ADNPGVW MHCHL+VH SWGL MAW+VNDG P QKLPPPPSD+
Sbjct: 477 NTISVPTAGWVAIRFVADNPGVWIMHCHLDVHLSWGLSMAWLVNDGPLPNQKLPPPPSDI 536
Query: 558 PKC 560
P C
Sbjct: 537 PMC 539
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q5N9W4|LAC5_ORYSJ Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/549 (60%), Positives = 394/549 (71%), Gaps = 59/549 (10%)
Query: 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHW 94
G+TRHY F+++M N+TRLC TKSI TVNGQFPGP+++ REGDRL+++V N++ YNV+ HW
Sbjct: 35 GLTRHYTFNVQMTNVTRLCVTKSIPTVNGQFPGPKLVVREGDRLVVKVHNHMNYNVSFHW 94
Query: 95 HGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIII 154
HG+ QLR+GWADGP+Y+TQCPIQ G SYVY+FTVTGQRGTL+WHAH SWLR LYGP++I
Sbjct: 95 HGILQLRNGWADGPSYITQCPIQGGGSYVYDFTVTGQRGTLWWHAHFSWLRVHLYGPLVI 154
Query: 155 LPKQQASYPFPQPFEEV-PIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFY 213
LPK+ +PFP+P++E+ PI+FGEW+ ADTE +IN+A+QTG PNISDA+T NGLPGP Y
Sbjct: 155 LPKRGEGFPFPRPYKELPPIMFGEWFNADTEAVINQALQTGAGPNISDAYTFNGLPGPTY 214
Query: 214 NCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAK--------- 264
NC++KDT+K+KV PG+TYLLR+IN+ALNDELFF IANHTLT+VE DA Y K
Sbjct: 215 NCSSKDTYKVKVQPGRTYLLRLINSALNDELFFGIANHTLTVVEADANYVKPFTAKTLVI 274
Query: 265 ----------SKAPNAN---FLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLL 311
+ APN + +A PY +FDNTT VLEY T N
Sbjct: 275 SPGQTMNLLLTTAPNPGSPVYAMAIAPYTNTQGTFDNTTAVAVLEYAPTRASATGN--NN 332
Query: 312 KPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQ 371
P LP++NDTN V FS K RSLATA++PA+VP VDR FTVGLG PCP NQTCQ
Sbjct: 333 LPLPPLPRYNDTNAVANFSSKFRSLATARYPARVPRAVDRHVLFTVGLGTDPCPSNQTCQ 392
Query: 372 GPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMV 431
GPN TK AAS+NN SFV+P VALL+AH R
Sbjct: 393 GPNGTKFAASINNNSFVRPRVALLEAHCQRR----------------------------- 423
Query: 432 SSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNL 491
VV L FN SVE+V+Q TSI AESHPLH+HGFNFFVV QGFGN+DP DPA +NL
Sbjct: 424 -----VVPLAFNTSVELVLQGTSIQGAESHPLHMHGFNFFVVGQGFGNYDPVNDPANYNL 478
Query: 492 VDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLP 551
VDP ERNTV VP+GGWVA+RFLADNPGVW MHCH +VH SWGL MAW+VNDG P QK+
Sbjct: 479 VDPVERNTVSVPTGGWVAVRFLADNPGVWLMHCHFDVHLSWGLSMAWLVNDGPLPSQKML 538
Query: 552 PPPSDLPKC 560
PPPSDLPKC
Sbjct: 539 PPPSDLPKC 547
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/569 (54%), Positives = 402/569 (70%), Gaps = 34/569 (5%)
Query: 13 RATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIA 72
R + L A ++L AL+ H ITRHYKF++ M+N+TRLC TK I+TVNG+FPGP + A
Sbjct: 9 RLSLLLMAACFLLQ--ALSAH-AITRHYKFNVVMRNMTRLCSTKPILTVNGKFPGPTLYA 65
Query: 73 REGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQR 132
REGD +L++V+N+V +NVTIHWHGVRQ+R+GW DGPAY+TQCPIQ G S++YNFT+TGQR
Sbjct: 66 REGDNVLVKVVNHVAHNVTIHWHGVRQIRTGWYDGPAYITQCPIQPGSSFLYNFTITGQR 125
Query: 133 GTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQ 192
GTL WHAHI+WLRAT++G I+ILPK YPFP P +E I+ GEWWK DTET+IN+AMQ
Sbjct: 126 GTLLWHAHINWLRATVHGAIVILPKLGVPYPFPAPHKEAVIVLGEWWKEDTETVINQAMQ 185
Query: 193 TGGAPNISDAFTINGLPGPFYNCA-AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANH 251
G PNISD+ TING PGP CA ++D FKL V GKTY+LR+INAALND+LFF +A H
Sbjct: 186 LGVGPNISDSHTINGHPGPLSECASSQDGFKLSVENGKTYMLRIINAALNDDLFFKVAGH 245
Query: 252 TLTIVETDAVYAK--------------------SKAPNANFLIAARPYATGPASFDNTTT 291
LT+VE DAVY K + +L++ P+ P DN T
Sbjct: 246 ELTVVEVDAVYTKPFKTDTLLITPGQTTNVLVRANQGAGRYLLSVSPFMDAPVQVDNKTG 305
Query: 292 AGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDR 351
L Y + +L L+KP P N T+ V +F+ + SL + ++PA VP VD
Sbjct: 306 TATLHYANTVSSSMASLTLVKP----PPQNATHIVSKFTDSLHSLNSKEYPANVPQTVDH 361
Query: 352 RFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDF 411
TVG+G++PCP +C N T++ ++NNV+F+ P+ +LQAH++N GV+T DF
Sbjct: 362 SLLLTVGVGVNPCP---SCI--NGTRVVGTINNVTFIMPSTPILQAHYYN-IPGVFTEDF 415
Query: 412 PANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFF 471
PA P KFNYTG+ P N+ +GT+V LP+NASV+VV+QDT II ESHP+HLHGFNFF
Sbjct: 416 PATPLHKFNYTGSGPKNLQTMNGTRVYRLPYNASVQVVLQDTGIISPESHPIHLHGFNFF 475
Query: 472 VVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTS 531
VV +G GN++P P+ FNL+DP ERNT+GVP+GGW AIRF +DNPGVWFMHCH EVHTS
Sbjct: 476 VVGKGVGNYNPRTSPSTFNLIDPIERNTIGVPTGGWTAIRFRSDNPGVWFMHCHFEVHTS 535
Query: 532 WGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
WGLKMA++V++GK P + L PPP DLP+C
Sbjct: 536 WGLKMAFVVDNGKRPSETLIPPPKDLPQC 564
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/569 (54%), Positives = 401/569 (70%), Gaps = 36/569 (6%)
Query: 17 LGFFALWILSELAL-----AKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRII 71
+G +W L ++ A E + RHYKF++ M+N+TRLC +K VTVNG++PGP I
Sbjct: 1 MGSHMVWFLFLVSFFSVFPAPSESMVRHYKFNVVMKNVTRLCSSKPTVTVNGRYPGPTIY 60
Query: 72 AREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131
ARE D LLI+V+N+VKYNV+IHWHGVRQ+R+GWADGPAY+TQCPIQ GQ Y YN+T+TGQ
Sbjct: 61 AREDDTLLIKVVNHVKYNVSIHWHGVRQVRTGWADGPAYITQCPIQPGQVYTYNYTLTGQ 120
Query: 132 RGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAM 191
RGTL+WHAHI WLRAT+YG ++ILPK+ YPFP+P E I+ GEWWK+DTE IINEA+
Sbjct: 121 RGTLWWHAHILWLRATVYGALVILPKRGVPYPFPKPDNEKVIVLGEWWKSDTENIINEAL 180
Query: 192 QTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANH 251
++G APN+SD+ ING PGP NC ++ +KL V GKTYLLR++NAALN+ELFF +A H
Sbjct: 181 KSGLAPNVSDSHMINGHPGPVRNCPSQG-YKLSVENGKTYLLRLVNAALNEELFFKVAGH 239
Query: 252 TLTIVETDAVYAK--------------------SKAPNANFLIAARPYATGPASFDNTTT 291
T+VE DAVY K + +L+ A P+ P + DN T
Sbjct: 240 IFTVVEVDAVYVKPFKTDTVLIAPGQTTNVLLTASKSAGKYLVTASPFMDAPIAVDNVTA 299
Query: 292 AGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDR 351
+ Y +G + + +L + P N T+ F+ +RSL + K+PA VP +D
Sbjct: 300 TATVHY---SGTLSSSPTIL---TLPPPQNATSIANNFTNSLRSLNSKKYPALVPTTIDH 353
Query: 352 RFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDF 411
FFTVGLGL+ CP TC+ N +++ AS+NNV+F+ P ALL AH+FN S GV+TTDF
Sbjct: 354 HLFFTVGLGLNACP---TCKAGNGSRVVASINNVTFIMPKTALLPAHYFNTS-GVFTTDF 409
Query: 412 PANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFF 471
P NPP FNY+G +N+ +GT++ LP+NA+V++V+QDT +I E+HP+HLHGFNFF
Sbjct: 410 PKNPPHVFNYSGGSVTNMATETGTRLYKLPYNATVQLVLQDTGVIAPENHPVHLHGFNFF 469
Query: 472 VVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTS 531
V +G GNF+ KDP FNLVDP ERNT+GVPSGGWV IRF ADNPGVWFMHCHLEVHT+
Sbjct: 470 EVGRGLGNFNSTKDPKNFNLVDPVERNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTT 529
Query: 532 WGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
WGLKMA++V +GKGP Q + PPP DLPKC
Sbjct: 530 WGLKMAFLVENGKGPNQSILPPPKDLPKC 558
|
Lignin degradation and detoxification of lignin-derived products (By similarity). Required for secondary xylem cell wall lignification. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/572 (54%), Positives = 402/572 (70%), Gaps = 38/572 (6%)
Query: 12 LRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRII 71
++ FL F ++L+ L + + + Y+F ++++NI+R+C K IVTVNG FPGP +
Sbjct: 1 MKMGFL-FLFCYLLAFLGYSPVDAAVKKYQFDVQVKNISRICNAKPIVTVNGMFPGPTVY 59
Query: 72 AREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131
AREGDR++I V N+V+YN++IHWHG++Q R+GWADGPAY+TQCPIQTGQSY+Y+F VTGQ
Sbjct: 60 AREGDRVIINVTNHVQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGQSYLYDFNVTGQ 119
Query: 132 RGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAM 191
RGTL+WHAHI WLRAT+YG I+ILP YPFPQP++E II GEWW D ET +N+A
Sbjct: 120 RGTLWWHAHILWLRATVYGAIVILPAPGKPYPFPQPYQESNIILGEWWNKDVETAVNQAN 179
Query: 192 QTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANH 251
Q G P +SDA TING PGP + C+ K TF ++ GKTYLLR+INAALNDELFF IA H
Sbjct: 180 QLGAPPPMSDAHTINGKPGPLFPCSEKHTFVIEAEAGKTYLLRIINAALNDELFFGIAGH 239
Query: 252 TLTIVETDAVYAK---------------------SKAPNANFLIAARPYATGPASFDNTT 290
+T+VE DAVY K ++PN F+ AA P+ P S DN T
Sbjct: 240 NMTVVEIDAVYTKPFTTKAILLGPGQTTNVLVKTDRSPNRYFM-AASPFMDAPVSVDNKT 298
Query: 291 TAGVLEYDQ-PNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKV 349
+L+Y PN + LP NDT+F + ++ K++SL T FPA VP+KV
Sbjct: 299 VTAILQYKGVPNTVLPI-------LPKLPLPNDTSFALDYNGKLKSLNTPNFPALVPLKV 351
Query: 350 DRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTT 409
DRR F+T+GLG++ CP TC N T LAAS+NN++F+ P ALL+AH+ N S GV+ T
Sbjct: 352 DRRLFYTIGLGINACP---TCV--NGTNLAASINNITFIMPKTALLKAHYSNIS-GVFRT 405
Query: 410 DFPANPPFKFNYTGTP-PSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGF 468
DFP PP FNYTG P +N+ S+GT++ + FN ++E+V+QDT+++ ESHP HLHG+
Sbjct: 406 DFPDRPPKAFNYTGVPLTANLGTSTGTRLSRVKFNTTIELVLQDTNLLTVESHPFHLHGY 465
Query: 469 NFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEV 528
NFFVV G GNFDP KDPAKFNLVDP ERNTVGVP+GGW AIRF ADNPGVWFMHCHLEV
Sbjct: 466 NFFVVGTGVGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEV 525
Query: 529 HTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
HT WGLKMA++V +G+ P+ + PPP D P C
Sbjct: 526 HTMWGLKMAFVVENGETPELSVLPPPKDYPSC 557
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 560 | ||||||
| 255581512 | 585 | laccase, putative [Ricinus communis] gi| | 0.991 | 0.948 | 0.785 | 0.0 | |
| 224090738 | 579 | laccase 110c [Populus trichocarpa] gi|22 | 0.985 | 0.953 | 0.790 | 0.0 | |
| 356567953 | 584 | PREDICTED: laccase-17-like [Glycine max] | 0.996 | 0.955 | 0.747 | 0.0 | |
| 225440404 | 569 | PREDICTED: laccase-17-like [Vitis vinife | 0.969 | 0.954 | 0.770 | 0.0 | |
| 359481764 | 577 | PREDICTED: laccase-17 isoform 1 [Vitis v | 0.985 | 0.956 | 0.751 | 0.0 | |
| 297740346 | 1829 | unnamed protein product [Vitis vinifera] | 0.985 | 0.301 | 0.751 | 0.0 | |
| 359481766 | 577 | PREDICTED: laccase-17 isoform 2 [Vitis v | 0.985 | 0.956 | 0.746 | 0.0 | |
| 356523167 | 615 | PREDICTED: laccase-17-like [Glycine max] | 0.996 | 0.907 | 0.742 | 0.0 | |
| 356527382 | 581 | PREDICTED: laccase-17-like [Glycine max] | 0.976 | 0.941 | 0.756 | 0.0 | |
| 449440323 | 572 | PREDICTED: laccase-17-like [Cucumis sati | 0.967 | 0.947 | 0.75 | 0.0 |
| >gi|255581512|ref|XP_002531562.1| laccase, putative [Ricinus communis] gi|223528823|gb|EEF30828.1| laccase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/583 (78%), Positives = 507/583 (86%), Gaps = 28/583 (4%)
Query: 4 SLLLRSAILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNG 63
S L R+ ++RAT F+L I E+ +AKH GITRHYKF I +QN+TRLCQTKSIVTVNG
Sbjct: 5 SHLTRAMLIRATVFALFSLCIFPEMIVAKHAGITRHYKFTIILQNVTRLCQTKSIVTVNG 64
Query: 64 QFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYV 123
QFPGPRIIAREGDRLLI+V+N+V+YNVT+HWHGVRQLRSGWADGPAY+ QCPIQTGQSYV
Sbjct: 65 QFPGPRIIAREGDRLLIKVVNHVQYNVTLHWHGVRQLRSGWADGPAYIAQCPIQTGQSYV 124
Query: 124 YNFTVTGQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADT 183
YNFTVTGQRGTLFWHAHISWLRA+LYGPI+ILPK+ ASYPFPQP +EVPIIFGEWWKADT
Sbjct: 125 YNFTVTGQRGTLFWHAHISWLRASLYGPIVILPKKDASYPFPQPHKEVPIIFGEWWKADT 184
Query: 184 ETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDE 243
E IIN+AM+TGGAPN+SDAFTINGLPGP YNC+AKDTFKLKV PGKTY+LR+INAALNDE
Sbjct: 185 EVIINQAMRTGGAPNVSDAFTINGLPGPLYNCSAKDTFKLKVKPGKTYMLRLINAALNDE 244
Query: 244 LFFSIANHTLTIVETDAVY----------------------AKSKAPNANFLIAARPYAT 281
LFFSIANHTLT+VETDAVY AK+KAPNA FL+AARPYAT
Sbjct: 245 LFFSIANHTLTVVETDAVYVKPFKTHTVIITPGQTTNVLLKAKAKAPNATFLMAARPYAT 304
Query: 282 GPASFDNTTTAGVLEYDQP----NGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLA 337
GPA+FDNTTTAG+LEY+ P + +K PLLKP+ LP FNDT F M+FSKK+RSLA
Sbjct: 305 GPAAFDNTTTAGILEYENPSLSSSKNKSKKFPLLKPS--LPMFNDTAFSMRFSKKVRSLA 362
Query: 338 TAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQA 397
T KFPAKVP KVDR FFFTVGLG+ PC +NQTCQGPNNT++AAS+NNVSFVQPN+ALLQA
Sbjct: 363 TVKFPAKVPQKVDRHFFFTVGLGILPCSRNQTCQGPNNTRVAASINNVSFVQPNIALLQA 422
Query: 398 HFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIV 457
HFF++SKGVYTTDFPANPPFKFNYTGTPP+NIM +SGTKVVVLPFN +VE+V+QDT II
Sbjct: 423 HFFDQSKGVYTTDFPANPPFKFNYTGTPPTNIMATSGTKVVVLPFNTNVELVLQDTGIIS 482
Query: 458 AESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517
AESHPLHLHGFNFFVV QGFGNFD DPAKFNL DPAERNT+GVPSGGWVAIRFLADNP
Sbjct: 483 AESHPLHLHGFNFFVVGQGFGNFDAKNDPAKFNLFDPAERNTIGVPSGGWVAIRFLADNP 542
Query: 518 GVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
G WFMHCHLEVHTSWGLKMAWIV DGK P QKLPPPPSDLPKC
Sbjct: 543 GAWFMHCHLEVHTSWGLKMAWIVTDGKRPHQKLPPPPSDLPKC 585
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224090738|ref|XP_002309069.1| laccase 110c [Populus trichocarpa] gi|222855045|gb|EEE92592.1| laccase 110c [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/581 (79%), Positives = 496/581 (85%), Gaps = 29/581 (4%)
Query: 7 LRSAILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFP 66
+ SA LR ALWI SEL +AKH GITRHYKF IK+QN+TRLC+TKSIVTVNGQ P
Sbjct: 1 MGSAFLRILVTALCALWIFSELVVAKHAGITRHYKFDIKLQNVTRLCRTKSIVTVNGQIP 60
Query: 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNF 126
GPRIIAREGDRLLI+V+N+V+YNVT+HWHG+RQLRSGWADGPAYVTQCPIQTGQSYVYNF
Sbjct: 61 GPRIIAREGDRLLIKVVNHVQYNVTLHWHGIRQLRSGWADGPAYVTQCPIQTGQSYVYNF 120
Query: 127 TVTGQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETI 186
TVTGQRGTLFWHAHISWLRATLYGPI+ILPK+ SYPFP P +EVPIIFGEWWKADTE I
Sbjct: 121 TVTGQRGTLFWHAHISWLRATLYGPIVILPKKGVSYPFPLPHKEVPIIFGEWWKADTEKI 180
Query: 187 INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFF 246
I++A++TGGAPNISDA+TING PG YNC+AKDTFKLKV PGKTYLLR+INAALNDELFF
Sbjct: 181 ISQALKTGGAPNISDAYTINGHPGLLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFF 240
Query: 247 SIANHTLTIVETDAVY----------------------AKSKAPNANFLIAARPYATGPA 284
SIANH+LT+VE DAVY AK+KAPN+ FL+AARPYATGP
Sbjct: 241 SIANHSLTVVEADAVYVKPFKTHIVLITPGQTTNVLLMAKAKAPNSTFLMAARPYATGPG 300
Query: 285 SFDNTTTAGVLEYDQPNGITT-----KNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATA 339
SFDNTTTAG+LEYDQ T K LPLLKP+ LP FNDT F +F KKIRSLA A
Sbjct: 301 SFDNTTTAGILEYDQNPSATNSKSKNKKLPLLKPS--LPVFNDTTFATKFVKKIRSLANA 358
Query: 340 KFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHF 399
+FPAKVP KVDRRFFFT+GLG PC QN+TCQGPNNT AASVNNVSFVQPN+ALLQ+HF
Sbjct: 359 RFPAKVPKKVDRRFFFTIGLGSLPCSQNKTCQGPNNTMFAASVNNVSFVQPNIALLQSHF 418
Query: 400 FNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAE 459
NRSKGVYTTDFP NPPFKFNYTGTPPSN M + GTKVVVLPFN SVE+VMQDTSII AE
Sbjct: 419 LNRSKGVYTTDFPTNPPFKFNYTGTPPSNTMTAKGTKVVVLPFNTSVELVMQDTSIIGAE 478
Query: 460 SHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGV 519
SHPLHLHGFNFFVV QGFGNFDP KDP KFNLVDPAERNTVGVPSGGWVAIRFLADNPGV
Sbjct: 479 SHPLHLHGFNFFVVGQGFGNFDPKKDPVKFNLVDPAERNTVGVPSGGWVAIRFLADNPGV 538
Query: 520 WFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
WFMHCHLEVHTSWGLKMAW+VNDGK P QKLPPPPSDLPKC
Sbjct: 539 WFMHCHLEVHTSWGLKMAWVVNDGKRPSQKLPPPPSDLPKC 579
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567953|ref|XP_003552179.1| PREDICTED: laccase-17-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/586 (74%), Positives = 490/586 (83%), Gaps = 28/586 (4%)
Query: 1 MGPSLLLRSAILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVT 60
MG + L +RA F+ AL IL EL AKH +TRHYKF+IKMQN TRLCQTK+IVT
Sbjct: 1 MGCAYLNMPGFMRAMFVVLCALMILPELTHAKHARVTRHYKFNIKMQNFTRLCQTKNIVT 60
Query: 61 VNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQ 120
VNG+FPGPRIIAREGDR++++V+N+V+YNVT+HWHG+RQL+S WADGPAY+TQCPIQTGQ
Sbjct: 61 VNGRFPGPRIIAREGDRIMVKVVNHVQYNVTLHWHGIRQLKSAWADGPAYITQCPIQTGQ 120
Query: 121 SYVYNFTVTGQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWK 180
S+VYNFTV GQRGTL+WHAHISWLR TLYGPI+ILPK+ YPFPQPF EVPII GEWWK
Sbjct: 121 SFVYNFTVIGQRGTLWWHAHISWLRTTLYGPIVILPKRHVPYPFPQPFREVPIILGEWWK 180
Query: 181 ADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAAL 240
ADTE +IN+AMQTG APN+SDA TINGLPGP NCAAK+TFKLKV PGKTYLLR+INAAL
Sbjct: 181 ADTEAVINQAMQTGLAPNVSDAHTINGLPGPVSNCAAKETFKLKVKPGKTYLLRLINAAL 240
Query: 241 NDELFFSIANHTLTIVETDAVY----------------------AKSKAPNANFLIAARP 278
NDE+FFSIANHTLT+VE DAVY AKSKAPNA F I+ RP
Sbjct: 241 NDEMFFSIANHTLTMVEADAVYVKPFSTKVVLITPGQTVNVLLKAKSKAPNATFAISTRP 300
Query: 279 YATGPASFDNTTTAGVLEYDQPNGIT----TKNLPLLKPAAILPKFNDTNFVMQFSKKIR 334
YATGPA+FDNTT G LEY +P+ + TK LPLL+ A+ PKFNDT F M F K+R
Sbjct: 301 YATGPAAFDNTTATGFLEYKKPSLASSKSNTKKLPLLR--AVFPKFNDTVFAMNFHNKVR 358
Query: 335 SLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVAL 394
SLA+A+FPAKVP VDRRFFFTVGLG+S C +NQ CQGPNNT++AA+VNNV+FV PN+AL
Sbjct: 359 SLASARFPAKVPKTVDRRFFFTVGLGISQCSKNQQCQGPNNTRVAAAVNNVTFVTPNIAL 418
Query: 395 LQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTS 454
LQAHFFN+SKGVYTTDFPANPPFKFNYTGTPPSNI VSSGTK VVLP+N SVE+V+QDTS
Sbjct: 419 LQAHFFNKSKGVYTTDFPANPPFKFNYTGTPPSNIFVSSGTKAVVLPYNTSVELVLQDTS 478
Query: 455 IIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514
II AESHPLHLHGFNFF+V QG GNFDP KDP KFNLVDPAERNT GVPSGGWVA+RFLA
Sbjct: 479 IIGAESHPLHLHGFNFFIVGQGNGNFDPKKDPKKFNLVDPAERNTAGVPSGGWVAVRFLA 538
Query: 515 DNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
DNPGVWFMHCHLEVHTSWGLKMAWIV DGK QKLPPPPSDLPKC
Sbjct: 539 DNPGVWFMHCHLEVHTSWGLKMAWIVQDGKRRNQKLPPPPSDLPKC 584
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225440404|ref|XP_002268628.1| PREDICTED: laccase-17-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/570 (77%), Positives = 486/570 (85%), Gaps = 27/570 (4%)
Query: 16 FLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREG 75
ALW L EL LAKH GITRHY F IK+Q +TRLCQTKSIVTVNGQFPGPRIIAREG
Sbjct: 2 LFALCALWNLPELVLAKHAGITRHYNFDIKLQKVTRLCQTKSIVTVNGQFPGPRIIAREG 61
Query: 76 DRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTL 135
DR+LI+V+NNV+ N+TIHWHG+RQLRSGWADGPAYVTQCPIQTGQSYVYNFT+TGQRGTL
Sbjct: 62 DRVLIKVVNNVQNNITIHWHGIRQLRSGWADGPAYVTQCPIQTGQSYVYNFTITGQRGTL 121
Query: 136 FWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGG 195
FWHAHISWLRATLYGP++ILPK+ YPFPQPF+EVPIIFGEWWKADTET+IN+AMQTGG
Sbjct: 122 FWHAHISWLRATLYGPLVILPKRGVPYPFPQPFKEVPIIFGEWWKADTETMINQAMQTGG 181
Query: 196 APNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTI 255
APN+SDA+TINGLPGP YNC+AKDTF+LKV PGKTYLLR+INAALNDELFFSIANHT+T+
Sbjct: 182 APNVSDAYTINGLPGPLYNCSAKDTFRLKVKPGKTYLLRLINAALNDELFFSIANHTVTV 241
Query: 256 VETDAVYA----------------------KSKAPNANFLIAARPYATGPASFDNTTTAG 293
VE DAVY KS +PNA FL+AAR YATGPA+FDN+TTAG
Sbjct: 242 VEVDAVYVKPFKTNTLVITPGQTTNILLKTKSHSPNATFLMAARSYATGPAAFDNSTTAG 301
Query: 294 VLEYDQPNGIT-TKNL--PLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVD 350
+LEY+ + ++ TKN + +PA LP FNDT F M FSKK+RSLAT KFPAKVP V
Sbjct: 302 ILEYEHMSSMSNTKNKRPSVHRPA--LPTFNDTLFAMSFSKKLRSLATTKFPAKVPQTVS 359
Query: 351 RRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTD 410
RRFFFTVGLGL C +NQ C GPNNT +AA++NNVSFVQP+ ALLQAHFF +SKGVYTTD
Sbjct: 360 RRFFFTVGLGLIQCSRNQACPGPNNTMVAAAINNVSFVQPSTALLQAHFFGKSKGVYTTD 419
Query: 411 FPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNF 470
FPANPPFKFNYTGTPPSNI+V+SGTKVVVLPFN VE+V+QDTSII AESHPLHLHGFNF
Sbjct: 420 FPANPPFKFNYTGTPPSNILVNSGTKVVVLPFNTRVELVLQDTSIIGAESHPLHLHGFNF 479
Query: 471 FVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHT 530
VV QGFGNFDP KDP+ FNLVDP ERNTVGVPSGGWVAIRF ADNPGVWFMHCHLEVHT
Sbjct: 480 HVVGQGFGNFDPKKDPSNFNLVDPIERNTVGVPSGGWVAIRFRADNPGVWFMHCHLEVHT 539
Query: 531 SWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
SWGLKMAW+V DGK P QKLPPPP+DLPKC
Sbjct: 540 SWGLKMAWVVMDGKRPNQKLPPPPADLPKC 569
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359481764|ref|XP_002269038.2| PREDICTED: laccase-17 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/579 (75%), Positives = 492/579 (84%), Gaps = 27/579 (4%)
Query: 7 LRSAILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFP 66
+ S I+R A+W L +L LAKH G TRHYKF IK+Q +TRLCQTKSIVTVNGQFP
Sbjct: 1 MGSCIMRIIMFAVCAMWFLPDLVLAKHAGSTRHYKFDIKLQTVTRLCQTKSIVTVNGQFP 60
Query: 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNF 126
GPRIIAREGDR++I+V+N+V+ N+TIHWHG+RQLRSGWADGPAY+TQCPIQTGQSYVYNF
Sbjct: 61 GPRIIAREGDRVIIKVVNHVQNNITIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNF 120
Query: 127 TVTGQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETI 186
T+TGQRGTLFWHAHISWLRAT+YG ++ILPK+ YPFPQPF+EVPIIFGEWWKAD ET+
Sbjct: 121 TITGQRGTLFWHAHISWLRATVYGSLVILPKRGVPYPFPQPFKEVPIIFGEWWKADIETM 180
Query: 187 INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFF 246
IN+AMQTGGAPN+SDA+T+NGLPGP YNC+AKD F+LKV PGKTYLLR+INAALNDELFF
Sbjct: 181 INQAMQTGGAPNVSDAYTMNGLPGPLYNCSAKDAFRLKVKPGKTYLLRLINAALNDELFF 240
Query: 247 SIANHTLTIVETDAVYA----------------------KSKAPNANFLIAARPYATGPA 284
SIANHT+T+VE DAVY KS +PNA FL+AAR YATGPA
Sbjct: 241 SIANHTVTVVEVDAVYVKPFKTNTLVITPGQTTNILLKTKSHSPNATFLMAARSYATGPA 300
Query: 285 SFDNTTTAGVLEYDQPNGIT-TKNL--PLLKPAAILPKFNDTNFVMQFSKKIRSLATAKF 341
+FDN+TTAG+LEY+ + ++ TKN +LKPA LP FNDT F M+FSKK+RSLA+ KF
Sbjct: 301 AFDNSTTAGILEYEHKSSVSNTKNRKPSVLKPA--LPMFNDTIFAMKFSKKLRSLASNKF 358
Query: 342 PAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFN 401
PAKVP V+RRFFFTVGLGL C +NQ C GPNNT +AA++NNVSFVQP+ ALLQAHFF
Sbjct: 359 PAKVPQTVNRRFFFTVGLGLIQCSRNQACPGPNNTMVAAAINNVSFVQPSTALLQAHFFG 418
Query: 402 RSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESH 461
+SKGVYTTDFPANPPFKFNYTGTPPSNI+V+SGTKVVVLPFN VE+V+QDTSII AESH
Sbjct: 419 KSKGVYTTDFPANPPFKFNYTGTPPSNILVNSGTKVVVLPFNTRVELVLQDTSIIGAESH 478
Query: 462 PLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWF 521
PLHLHGFNF+VV QGFGNFDP KDPA FNLVDP ERNTVGVPSGGWVAIRF ADNPGVWF
Sbjct: 479 PLHLHGFNFYVVGQGFGNFDPKKDPANFNLVDPIERNTVGVPSGGWVAIRFHADNPGVWF 538
Query: 522 MHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
MHCHLEVHTSWGLKMAW+V DGK P QKLPPPPSDLPKC
Sbjct: 539 MHCHLEVHTSWGLKMAWVVMDGKRPNQKLPPPPSDLPKC 577
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297740346|emb|CBI30528.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/579 (75%), Positives = 491/579 (84%), Gaps = 27/579 (4%)
Query: 7 LRSAILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFP 66
+ S +R F A W+L EL AKH G TRHYKF IK+Q +TRLCQTKSIVTVNGQFP
Sbjct: 1253 MGSGFVRVMLFAFCAFWVLPELVFAKHAGTTRHYKFDIKLQTVTRLCQTKSIVTVNGQFP 1312
Query: 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNF 126
GPRIIAREGDR++I+V+N+V+ N+TIHWHG+RQLRSGWADGPAY+TQCPIQTGQSYVYNF
Sbjct: 1313 GPRIIAREGDRVIIKVVNHVQNNITIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNF 1372
Query: 127 TVTGQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETI 186
T+TGQRGTLFWHAHISWLRAT+YG ++ILPK+ YPFPQPF+EVPIIFGEWWKAD ET+
Sbjct: 1373 TITGQRGTLFWHAHISWLRATVYGSLVILPKRGVPYPFPQPFKEVPIIFGEWWKADIETM 1432
Query: 187 INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFF 246
IN+AMQTGGAPN+SDA+T+NGLPGP YNC+AKD F+LKV PGKTYLLR+INAALNDELFF
Sbjct: 1433 INQAMQTGGAPNVSDAYTMNGLPGPLYNCSAKDAFRLKVKPGKTYLLRLINAALNDELFF 1492
Query: 247 SIANHTLTIVETDAVYA----------------------KSKAPNANFLIAARPYATGPA 284
SIANHT+T+VE DAVY KS +PNA FL+AAR YATGPA
Sbjct: 1493 SIANHTVTVVEVDAVYVKPFKTNTLVITPGQTTNILLKTKSHSPNATFLMAARSYATGPA 1552
Query: 285 SFDNTTTAGVLEYDQPNGIT-TKNL--PLLKPAAILPKFNDTNFVMQFSKKIRSLATAKF 341
+FDN+TTAG+LEY+ + ++ TKN +LKPA LP FNDT F M+FSKK+RSLA+ KF
Sbjct: 1553 AFDNSTTAGILEYEHKSSVSNTKNRKPSVLKPA--LPMFNDTIFAMKFSKKLRSLASNKF 1610
Query: 342 PAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFN 401
PAKVP V+RRFFFTVGLGL C +NQ C GPNNT +AA++NNVSFVQP+ ALLQAHFF
Sbjct: 1611 PAKVPQTVNRRFFFTVGLGLIQCSRNQACPGPNNTMVAAAINNVSFVQPSTALLQAHFFG 1670
Query: 402 RSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESH 461
+SKGVYTTDFPANPPFKFNYTGTPPSNI+V+SGTKVVVLPFN VE+V+QDTSII AESH
Sbjct: 1671 KSKGVYTTDFPANPPFKFNYTGTPPSNILVNSGTKVVVLPFNTRVELVLQDTSIIGAESH 1730
Query: 462 PLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWF 521
PLHLHGFNF+VV QGFGNFDP KDPA FNLVDP ERNTVGVPSGGWVAIRF ADNPGVWF
Sbjct: 1731 PLHLHGFNFYVVGQGFGNFDPKKDPANFNLVDPIERNTVGVPSGGWVAIRFHADNPGVWF 1790
Query: 522 MHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
MHCHLEVHTSWGLKMAW+V DGK P QKLPPPPSDLPKC
Sbjct: 1791 MHCHLEVHTSWGLKMAWVVMDGKRPNQKLPPPPSDLPKC 1829
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359481766|ref|XP_003632672.1| PREDICTED: laccase-17 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/579 (74%), Positives = 492/579 (84%), Gaps = 27/579 (4%)
Query: 7 LRSAILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFP 66
+ S I+R A+W L +L LAKH G TRHYKF IK+Q +TRLCQ+K+IVTVNGQFP
Sbjct: 1 MGSCIMRIIMFAVCAMWFLPDLVLAKHAGSTRHYKFDIKLQKVTRLCQSKNIVTVNGQFP 60
Query: 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNF 126
GPRIIAREGDR++I+V+N+V+ N+TIHWHG+RQLRSGWADGPAY+TQCPIQTGQSY+YNF
Sbjct: 61 GPRIIAREGDRVIIKVVNHVQNNITIHWHGIRQLRSGWADGPAYITQCPIQTGQSYLYNF 120
Query: 127 TVTGQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETI 186
T+TGQRGTLFWHAHISWLRAT+YG ++ILPK+ YPFPQPF+EVPIIFGEWWKAD ET+
Sbjct: 121 TITGQRGTLFWHAHISWLRATVYGSLVILPKRGVPYPFPQPFKEVPIIFGEWWKADIETM 180
Query: 187 INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFF 246
IN+AMQTGGAPN+SDA+T+NGLPGP YNC+AKD F+LKV PGKTYLLR+INAALNDELFF
Sbjct: 181 INQAMQTGGAPNVSDAYTMNGLPGPLYNCSAKDAFRLKVKPGKTYLLRLINAALNDELFF 240
Query: 247 SIANHTLTIVETDAVYA----------------------KSKAPNANFLIAARPYATGPA 284
SIANHT+T+VE DAVY KS +PNA FL+AAR YATGPA
Sbjct: 241 SIANHTVTVVEVDAVYVKPFKTNTLVITPGQTTNILLKTKSHSPNATFLMAARSYATGPA 300
Query: 285 SFDNTTTAGVLEYDQPNGIT-TKNL--PLLKPAAILPKFNDTNFVMQFSKKIRSLATAKF 341
+FDN+TTAG+LEY+ + ++ TKN +LKPA LP FNDT F M+FSKK+RSLA+ KF
Sbjct: 301 AFDNSTTAGILEYEHKSSVSNTKNRKPSVLKPA--LPMFNDTIFAMKFSKKLRSLASNKF 358
Query: 342 PAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFN 401
PAKVP V+RRFFFTVGLGL C +NQ C GPNNT +AA++NNVSFVQP+ ALLQAHFF
Sbjct: 359 PAKVPQTVNRRFFFTVGLGLIQCSRNQACPGPNNTMVAAAINNVSFVQPSTALLQAHFFG 418
Query: 402 RSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESH 461
+SKGVYTTDFPANPPFKFNYTGTPPSNI+V+SGTKVVVLPFN VE+V+QDTSII AESH
Sbjct: 419 KSKGVYTTDFPANPPFKFNYTGTPPSNILVNSGTKVVVLPFNTRVELVLQDTSIIGAESH 478
Query: 462 PLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWF 521
PLHLHGFNF+VV QGFGNFDP KDPA FNLVDP ERNTVGVPSGGWVAIRF ADNPGVWF
Sbjct: 479 PLHLHGFNFYVVGQGFGNFDPKKDPANFNLVDPIERNTVGVPSGGWVAIRFHADNPGVWF 538
Query: 522 MHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
MHCHLEVHTSWGLKMAW+V DGK P QKLPPPPSDLPKC
Sbjct: 539 MHCHLEVHTSWGLKMAWVVMDGKRPNQKLPPPPSDLPKC 577
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523167|ref|XP_003530213.1| PREDICTED: laccase-17-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/586 (74%), Positives = 484/586 (82%), Gaps = 28/586 (4%)
Query: 1 MGPSLLLRSAILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVT 60
MG + L +RA F+ A+ IL EL AKH +TRHYKF+IKMQN TRLCQTKSIVT
Sbjct: 32 MGIAYLNMPGFMRAMFIMLCAMMILPELTHAKHARVTRHYKFNIKMQNFTRLCQTKSIVT 91
Query: 61 VNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQ 120
VNG+FPGPRIIAREGDR++++V+N+V+YNVT+HWHG+RQL+S WADGPAY+TQCPIQTGQ
Sbjct: 92 VNGRFPGPRIIAREGDRIVVKVVNHVQYNVTLHWHGIRQLKSAWADGPAYITQCPIQTGQ 151
Query: 121 SYVYNFTVTGQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWK 180
S+VYNFTV GQRGTL+WHAHISWLR TLYGPI+ILPK+ YPFPQPF EVPII GEWWK
Sbjct: 152 SFVYNFTVIGQRGTLWWHAHISWLRTTLYGPIVILPKRHVPYPFPQPFREVPIILGEWWK 211
Query: 181 ADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAAL 240
ADTE +IN+AMQTG APNISD TINGLPGP NCAAK+TF+LKV PGKTYLLR+INAAL
Sbjct: 212 ADTEAVINQAMQTGLAPNISDVHTINGLPGPVSNCAAKETFQLKVKPGKTYLLRLINAAL 271
Query: 241 NDELFFSIANHTLTIVETDAVY----------------------AKSKAPNANFLIAARP 278
NDE+FFSIANHTLT+VE DAVY AKSKAPN F I+ RP
Sbjct: 272 NDEMFFSIANHTLTMVEADAVYVKPFSTKIVLITPGQTVNVLLKAKSKAPNGTFAISTRP 331
Query: 279 YATGPASFDNTTTAGVLEYDQ----PNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIR 334
YATGPASFDNTT G LEY + N TK LPLL+ A+ PKFNDT F M F K+R
Sbjct: 332 YATGPASFDNTTATGFLEYKKTSHASNKSNTKKLPLLR--AVFPKFNDTVFAMNFHNKVR 389
Query: 335 SLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVAL 394
SLA A+FPAKVP VDR FFFTVGLG+S C +NQ CQGPNNT++AA+VNNV+FV PN+AL
Sbjct: 390 SLANARFPAKVPKTVDRHFFFTVGLGISKCSKNQQCQGPNNTRVAAAVNNVTFVTPNIAL 449
Query: 395 LQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTS 454
LQAHFFN+SKGVYTTDFP+NPPFKFNYTGTPPSNI VSSGTK VVLP+N SVE+V+QDTS
Sbjct: 450 LQAHFFNKSKGVYTTDFPSNPPFKFNYTGTPPSNIFVSSGTKTVVLPYNTSVELVLQDTS 509
Query: 455 IIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514
II AESHPLHLHGFNFF+V QG GNFDP KDP KFNLVDPAERNT GVPSGGWVA+RFLA
Sbjct: 510 IIGAESHPLHLHGFNFFIVGQGNGNFDPKKDPIKFNLVDPAERNTAGVPSGGWVAVRFLA 569
Query: 515 DNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
DNPGVWFMHCHLEVHTSWGLKMAWIV DGK QKLPPPPSDLPKC
Sbjct: 570 DNPGVWFMHCHLEVHTSWGLKMAWIVQDGKRRNQKLPPPPSDLPKC 615
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356527382|ref|XP_003532290.1| PREDICTED: laccase-17-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/575 (75%), Positives = 488/575 (84%), Gaps = 28/575 (4%)
Query: 12 LRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRII 71
LRA FL ALWI+ EL LAKH ITRHY F++++QN+TRLCQTKSIVT+NG+FPGPR+I
Sbjct: 9 LRAIFLFSCALWIMPELTLAKHAKITRHYNFNVQLQNVTRLCQTKSIVTINGRFPGPRVI 68
Query: 72 AREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131
AREGDRL+I+V NNV YNVTIHWHGVRQLRS WADGPAYVTQCPIQTGQ++VYNFTVTGQ
Sbjct: 69 AREGDRLVIKVTNNVPYNVTIHWHGVRQLRSAWADGPAYVTQCPIQTGQTFVYNFTVTGQ 128
Query: 132 RGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAM 191
RGTL+WHAHISWLR TLYGPI+ILPK+ YPFPQ F+EVPIIFGEWWKADTET+IN+AM
Sbjct: 129 RGTLWWHAHISWLRTTLYGPIVILPKKHVPYPFPQTFKEVPIIFGEWWKADTETVINQAM 188
Query: 192 QTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANH 251
QTG APN+S+A+TING PG YN KDTFKLKV GKTYLLR+INAALN+ELFF IANH
Sbjct: 189 QTGLAPNLSNAYTINGFPGFLYNGTTKDTFKLKVKAGKTYLLRLINAALNNELFFGIANH 248
Query: 252 TLTIVETDAVYAK----------------------SKAPNANFLIAARPYATGPASFDNT 289
TLT+VE DAVY K SKAPNA F+IAARPYATGPA+FDNT
Sbjct: 249 TLTVVEADAVYVKPFRTNYVLITPGQTINVLLKTKSKAPNAAFVIAARPYATGPAAFDNT 308
Query: 290 TTAGVLEYDQPNGITTK----NLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKV 345
T G+LEY + + TK L LL+P +LPKFNDT F M+F+KK+RSLA A+FPAKV
Sbjct: 309 TATGLLEYKKSSVSNTKTKNKKLRLLRP--VLPKFNDTIFAMKFNKKVRSLANARFPAKV 366
Query: 346 PMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKG 405
P VD+ FFFTVGLG+S CP+NQ CQGPNNT++ A+VNNVSFV PN+ALLQAHFFN+SKG
Sbjct: 367 PKTVDKHFFFTVGLGISSCPKNQACQGPNNTRVTAAVNNVSFVMPNIALLQAHFFNKSKG 426
Query: 406 VYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHL 465
VYTTDFPANPPF+FNYTGTPP+NIM+SSGTK VVLPFNASVE+++QDTSII AESHPLHL
Sbjct: 427 VYTTDFPANPPFRFNYTGTPPNNIMISSGTKAVVLPFNASVELILQDTSIIGAESHPLHL 486
Query: 466 HGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCH 525
HGFNFFVV QG GNFDP KDP+KFNLVDPAERNT+GVPSGGWVA+RF ADNPGVWFMHCH
Sbjct: 487 HGFNFFVVGQGNGNFDPKKDPSKFNLVDPAERNTIGVPSGGWVAVRFFADNPGVWFMHCH 546
Query: 526 LEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
LEVHTSWGLKMAWIV DGK QKLPPPPSDLPKC
Sbjct: 547 LEVHTSWGLKMAWIVQDGKLHHQKLPPPPSDLPKC 581
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449440323|ref|XP_004137934.1| PREDICTED: laccase-17-like [Cucumis sativus] gi|449483665|ref|XP_004156653.1| PREDICTED: laccase-17-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/572 (75%), Positives = 485/572 (84%), Gaps = 30/572 (5%)
Query: 13 RATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIA 72
+A F+ +IL+ + + ITRHYKF I++QN+TRLCQTK+IVTVNGQFPGPRIIA
Sbjct: 7 KAIFVNILLCFILNIV----NARITRHYKFQIQLQNVTRLCQTKTIVTVNGQFPGPRIIA 62
Query: 73 REGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQR 132
REGDRLLI+V+N+V+ N+++HWHGVRQ RSGWADGPAYVTQCPIQTGQSYVYNFTV GQR
Sbjct: 63 REGDRLLIKVVNHVQNNISLHWHGVRQRRSGWADGPAYVTQCPIQTGQSYVYNFTVDGQR 122
Query: 133 GTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQ 192
GTLFWHAHISWLR+TLYGPIIILPK YPFPQPF+EVPIIFGEWWKADTE +IN+AMQ
Sbjct: 123 GTLFWHAHISWLRSTLYGPIIILPKTHQPYPFPQPFKEVPIIFGEWWKADTENVINQAMQ 182
Query: 193 TGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHT 252
GGAPNISDAFT NGLPGP YNC+A+DTFKLKV PGK+YLLR+INAALNDELFFSIANHT
Sbjct: 183 NGGAPNISDAFTFNGLPGPSYNCSAQDTFKLKVKPGKSYLLRLINAALNDELFFSIANHT 242
Query: 253 LTIVETDAVYAK----------------------SKAPNANFLIAARPYATGPASFDNTT 290
LT+VE DAVY K S +PNA FLIAARPYAT P +FDNTT
Sbjct: 243 LTVVEADAVYVKPFKTDVILITPGQTMNVLLHTKSNSPNATFLIAARPYATAPVAFDNTT 302
Query: 291 TAGVLEYDQPNGITTKN--LPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMK 348
G+LEY+ + KN LPL KP +LP+FNDT+F ++F+ KIRSLA +KFPAKVPM+
Sbjct: 303 VTGLLEYEPTKSLLNKNKKLPLHKP--VLPRFNDTSFSIKFNGKIRSLANSKFPAKVPMR 360
Query: 349 VDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYT 408
V RFFFTVGLGL PC +N++CQGPNNT+L+AS+NNV+FVQPN ALLQ+HFFN+S GVYT
Sbjct: 361 VKWRFFFTVGLGLLPCRRNRSCQGPNNTRLSASINNVTFVQPNTALLQSHFFNKSNGVYT 420
Query: 409 TDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGF 468
TDFPANPP KFNYTGTPP N MVSSGTKVV+LP+N++VE+V+QDTSI+ AESHPLHLHGF
Sbjct: 421 TDFPANPPIKFNYTGTPPKNSMVSSGTKVVMLPYNSAVELVLQDTSIVTAESHPLHLHGF 480
Query: 469 NFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEV 528
NFFVV QG GNFDPNKDP KFNLVDPAERNTVGVPSGGWVAIRF+ADNPG WFMHCHLEV
Sbjct: 481 NFFVVGQGIGNFDPNKDPPKFNLVDPAERNTVGVPSGGWVAIRFIADNPGAWFMHCHLEV 540
Query: 529 HTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
HTSWGLKMAWIV DGK P QKLPPPPSDLPKC
Sbjct: 541 HTSWGLKMAWIVEDGKLPNQKLPPPPSDLPKC 572
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 560 | ||||||
| TAIR|locus:2066117 | 573 | LAC2 "laccase 2" [Arabidopsis | 0.417 | 0.408 | 0.713 | 1.5e-192 | |
| TAIR|locus:2042842 | 558 | IRX12 "IRREGULAR XYLEM 12" [Ar | 0.901 | 0.905 | 0.557 | 2.5e-161 | |
| TAIR|locus:2143563 | 557 | LAC11 "laccase 11" [Arabidopsi | 0.923 | 0.928 | 0.542 | 6.5e-161 | |
| TAIR|locus:2154518 | 566 | LAC16 "laccase 16" [Arabidopsi | 0.916 | 0.906 | 0.536 | 1.6e-157 | |
| TAIR|locus:2150139 | 558 | LAC10 "laccase 10" [Arabidopsi | 0.891 | 0.894 | 0.549 | 1.4e-156 | |
| TAIR|locus:2194110 | 581 | LAC1 "laccase 1" [Arabidopsis | 0.403 | 0.388 | 0.569 | 1.7e-150 | |
| TAIR|locus:2063109 | 580 | LAC5 "laccase 5" [Arabidopsis | 0.448 | 0.432 | 0.515 | 7.4e-150 | |
| TAIR|locus:2060879 | 570 | LAC3 "laccase 3" [Arabidopsis | 0.451 | 0.443 | 0.496 | 2.1e-141 | |
| TAIR|locus:2182895 | 569 | LAC13 "laccase 13" [Arabidopsi | 0.5 | 0.492 | 0.453 | 3.1e-140 | |
| TAIR|locus:2153469 | 565 | LAC12 "laccase 12" [Arabidopsi | 0.925 | 0.916 | 0.485 | 3.5e-139 |
| TAIR|locus:2066117 LAC2 "laccase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 976 (348.6 bits), Expect = 1.5e-192, Sum P(2) = 1.5e-192
Identities = 167/234 (71%), Positives = 203/234 (86%)
Query: 31 AKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNV 90
A GITRHY+F I+++NITRLC+TK+IVTVNG+FPGPR+ AREGD L I+V+N+V N+
Sbjct: 23 AASAGITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNI 82
Query: 91 TIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYG 150
+IHWHG+RQLRSGWADGP+YVTQCPI+ GQSYVYNFTVTGQRGTL+WHAHI W+RAT+YG
Sbjct: 83 SIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTGQRGTLWWHAHIQWMRATVYG 142
Query: 151 PIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPG 210
P+IILPK YPFP+P+++VPI+FGEW+ AD + ++ +A+QTG PN SDA T NGLPG
Sbjct: 143 PLIILPKLHQPYPFPKPYKQVPILFGEWFNADPQAVVQQALQTGAGPNASDAHTFNGLPG 202
Query: 211 PFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAK 264
P YNC+ KDT+KL V PGKTYLLR+INAALNDELFF+IANHTLT+VE DA Y K
Sbjct: 203 PLYNCSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVK 256
|
|
| TAIR|locus:2042842 IRX12 "IRREGULAR XYLEM 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1571 (558.1 bits), Expect = 2.5e-161, P = 2.5e-161
Identities = 292/524 (55%), Positives = 370/524 (70%)
Query: 31 AKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNV 90
A E + RHYKF++ M+N+TRLC +K VTVNG++PGP I ARE D LLI+V+N+VKYNV
Sbjct: 20 APSESMVRHYKFNVVMKNVTRLCSSKPTVTVNGRYPGPTIYAREDDTLLIKVVNHVKYNV 79
Query: 91 TIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYG 150
+IHWHGVRQ+R+GWADGPAY+TQCPIQ GQ Y YN+T+TGQRGTL+WHAHI WLRAT+YG
Sbjct: 80 SIHWHGVRQVRTGWADGPAYITQCPIQPGQVYTYNYTLTGQRGTLWWHAHILWLRATVYG 139
Query: 151 PIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPG 210
++ILPK+ YPFP+P E I+ GEWWK+DTE IINEA+++G APN+SD+ ING PG
Sbjct: 140 ALVILPKRGVPYPFPKPDNEKVIVLGEWWKSDTENIINEALKSGLAPNVSDSHMINGHPG 199
Query: 211 PFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS-K--- 266
P NC ++ +KL V GKTYLLR++NAALN+ELFF +A H T+VE DAVY K K
Sbjct: 200 PVRNCPSQG-YKLSVENGKTYLLRLVNAALNEELFFKVAGHIFTVVEVDAVYVKPFKTDT 258
Query: 267 ---APN--ANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNXXXXXXXXXXXXF- 320
AP N L+ A A + + D T +
Sbjct: 259 VLIAPGQTTNVLLTASKSAGKYLVTASPFMDAPIAVDNVTATATVHYSGTLSSSPTILTL 318
Query: 321 ----NDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNT 376
N T+ F+ +RSL + K+PA VP +D FFTVGLGL+ CP TC+ N +
Sbjct: 319 PPPQNATSIANNFTNSLRSLNSKKYPALVPTTIDHHLFFTVGLGLNACP---TCKAGNGS 375
Query: 377 KLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTK 436
++ AS+NNV+F+ P ALL AH+FN S GV+TTDFP NPP FNY+G +N+ +GT+
Sbjct: 376 RVVASINNVTFIMPKTALLPAHYFNTS-GVFTTDFPKNPPHVFNYSGGSVTNMATETGTR 434
Query: 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAE 496
+ LP+NA+V++V+QDT +I E+HP+HLHGFNFF V +G GNF+ KDP FNLVDP E
Sbjct: 435 LYKLPYNATVQLVLQDTGVIAPENHPVHLHGFNFFEVGRGLGNFNSTKDPKNFNLVDPVE 494
Query: 497 RNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIV 540
RNT+GVPSGGWV IRF ADNPGVWFMHCHLEVHT+WGLKMA++V
Sbjct: 495 RNTIGVPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLV 538
|
|
| TAIR|locus:2143563 LAC11 "laccase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1567 (556.7 bits), Expect = 6.5e-161, P = 6.5e-161
Identities = 294/542 (54%), Positives = 375/542 (69%)
Query: 17 LGFFAL--WILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIARE 74
+GF L ++L+ L + + + Y+F ++++NI+R+C K IVTVNG FPGP + ARE
Sbjct: 3 MGFLFLFCYLLAFLGYSPVDAAVKKYQFDVQVKNISRICNAKPIVTVNGMFPGPTVYARE 62
Query: 75 GDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGT 134
GDR++I V N+V+YN++IHWHG++Q R+GWADGPAY+TQCPIQTGQSY+Y+F VTGQRGT
Sbjct: 63 GDRVIINVTNHVQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGQSYLYDFNVTGQRGT 122
Query: 135 LFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTG 194
L+WHAHI WLRAT+YG I+ILP YPFPQP++E II GEWW D ET +N+A Q G
Sbjct: 123 LWWHAHILWLRATVYGAIVILPAPGKPYPFPQPYQESNIILGEWWNKDVETAVNQANQLG 182
Query: 195 GAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLT 254
P +SDA TING PGP + C+ K TF ++ GKTYLLR+INAALNDELFF IA H +T
Sbjct: 183 APPPMSDAHTINGKPGPLFPCSEKHTFVIEAEAGKTYLLRIINAALNDELFFGIAGHNMT 242
Query: 255 IVETDAVYAKSKAPNANFLIAARPYATGPASFDNTTTAGVLE----YDQPNGITTKNXXX 310
+VE DAVY K A L+ D + + D P + K
Sbjct: 243 VVEIDAVYTKPFTTKA-ILLGPGQTTNVLVKTDRSPNRYFMAASPFMDAPVSVDNKTVTA 301
Query: 311 XXXXXXXXXF-----------NDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGL 359
NDT+F + ++ K++SL T FPA VP+KVDRR F+T+GL
Sbjct: 302 ILQYKGVPNTVLPILPKLPLPNDTSFALDYNGKLKSLNTPNFPALVPLKVDRRLFYTIGL 361
Query: 360 GLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKF 419
G++ CP TC N T LAAS+NN++F+ P ALL+AH+ N S GV+ TDFP PP F
Sbjct: 362 GINACP---TCV--NGTNLAASINNITFIMPKTALLKAHYSNIS-GVFRTDFPDRPPKAF 415
Query: 420 NYTGTP-PSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFG 478
NYTG P +N+ S+GT++ + FN ++E+V+QDT+++ ESHP HLHG+NFFVV G G
Sbjct: 416 NYTGVPLTANLGTSTGTRLSRVKFNTTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGVG 475
Query: 479 NFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAW 538
NFDP KDPAKFNLVDP ERNTVGVP+GGW AIRF ADNPGVWFMHCHLEVHT WGLKMA+
Sbjct: 476 NFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGLKMAF 535
Query: 539 IV 540
+V
Sbjct: 536 VV 537
|
|
| TAIR|locus:2154518 LAC16 "laccase 16" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1535 (545.4 bits), Expect = 1.6e-157, P = 1.6e-157
Identities = 294/548 (53%), Positives = 382/548 (69%)
Query: 17 LGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGD 76
L FF +LS + H I RHYKF++ M N T+LC +K IVTVNGQFPGP I+AREGD
Sbjct: 12 LTFFVFVLLSPTTV--HS-IIRHYKFNV-MTNTTKLCSSKPIVTVNGQFPGPTIVAREGD 67
Query: 77 RLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLF 136
+LI+V+N+VKYNV+IHWHG+RQLR+GWADGPAY+TQCPIQ GQ+Y++NFT+TGQRGTL+
Sbjct: 68 TILIKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYLHNFTLTGQRGTLW 127
Query: 137 WHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGA 196
WHAHI WLRAT++G I+ILPK YPFP+P++E I+ EWWK+D E +INEA + G A
Sbjct: 128 WHAHILWLRATVHGAIVILPKLGVPYPFPKPYKEKTIVLSEWWKSDVEELINEASRIGTA 187
Query: 197 PNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIV 256
P+ SDA TING G NC ++ ++ L V GKTY+LR+INAALN+ELFF IA H LT+V
Sbjct: 188 PSASDAHTINGHSGSISNCPSQSSYGLPVRAGKTYMLRIINAALNEELFFKIAGHVLTVV 247
Query: 257 ETDAVYAKSK-------AP----------NAN----FLIAARPYATGPASFDNTTTAGVL 295
E DAVY K AP NAN +++AA + +DN T L
Sbjct: 248 EVDAVYTKPYKTDTVFIAPGQTTNVLLTANANAGSNYMVAATTFTDAHIPYDNVTATATL 307
Query: 296 EYDQPNGITTKNXXXXXXXXXXXXFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFF 355
Y +T + N T +F++ +RSL + ++PA+VP V+ FF
Sbjct: 308 HYI--GHTSTVSTSKKTVLASLPPQNATWVATKFTRSLRSLNSLEYPARVPTTVEHSLFF 365
Query: 356 TVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANP 415
TVGLG +PC Q+C N +L A +NNV+F P ALLQAHFFN S GV+T DFPA P
Sbjct: 366 TVGLGANPC---QSCN--NGVRLVAGINNVTFTMPKTALLQAHFFNIS-GVFTDDFPAKP 419
Query: 416 PFKFNYTGTPPSNIMVSS--GTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVV 473
++YT + ++ GTK+ LP+NA+V++V+Q+T++I++++HP HLHGFNFF V
Sbjct: 420 SNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIVLQNTAMILSDNHPFHLHGFNFFEV 479
Query: 474 AQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWG 533
+G GNF+P KDP FNLVDP ERNTVGVP+GGW AIRF+ADNPGVWFMHCHLE+HT+WG
Sbjct: 480 GRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGWTAIRFIADNPGVWFMHCHLELHTTWG 539
Query: 534 LKMAWIVN 541
LKMA++V+
Sbjct: 540 LKMAFVVD 547
|
|
| TAIR|locus:2150139 LAC10 "laccase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1526 (542.2 bits), Expect = 1.4e-156, P = 1.4e-156
Identities = 288/524 (54%), Positives = 361/524 (68%)
Query: 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHW 94
G R Y F++ + +TR+C TK IVTVNG+FPGP I A E D +L+ V+NNVKYNV+IHW
Sbjct: 22 GAIRKYTFNVVTKQVTRICSTKQIVTVNGKFPGPTIYANEDDTILVNVVNNVKYNVSIHW 81
Query: 95 HGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIII 154
HG+RQLR+GWADGPAY+TQCPI+ G SYVYNFTVTGQRGTL+WHAH+ WLRAT++G I+I
Sbjct: 82 HGIRQLRTGWADGPAYITQCPIKPGHSYVYNFTVTGQRGTLWWHAHVLWLRATVHGAIVI 141
Query: 155 LPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYN 214
LPK YPFP+P E II GEWWK+DTET++NEA+++G APN+SDA ING PG N
Sbjct: 142 LPKLGLPYPFPKPHREEVIILGEWWKSDTETVVNEALKSGLAPNVSDAHVINGHPGFVPN 201
Query: 215 CAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKSK-------A 267
C ++ FKL V GKTY+LR+INAALN+ELFF IA H T+VE DAVY K A
Sbjct: 202 CPSQGNFKLAVESGKTYMLRLINAALNEELFFKIAGHRFTVVEVDAVYVKPFNTDTILIA 261
Query: 268 PNAN---FLIAARP---YATGPASFDNTTTAGVLEYDQPNGITTKNXXXXXXXXXXXXF- 320
P + AARP Y A F ++ V D T +
Sbjct: 262 PGQTTTALVSAARPSGQYLIAAAPFQDSAVVAV---DNRTATATVHYSGTLSATPTKTTS 318
Query: 321 ----NDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNT 376
N T+ F +RSL + +PA VP+ VD FTVGLG++ C +C+ N +
Sbjct: 319 PPPQNATSVANTFVNSLRSLNSKTYPANVPITVDHDLLFTVGLGINRC---HSCKAGNFS 375
Query: 377 KLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTK 436
++ A++NN++F P ALLQAH+FN + G+YTTDFPA P F++TG PPSN+ TK
Sbjct: 376 RVVAAINNITFKMPKTALLQAHYFNLT-GIYTTDFPAKPRRVFDFTGKPPSNLATMKATK 434
Query: 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAE 496
+ LP+N++V+VV+QDT + E+HP+HLHGFNFFVV G GN++ KD KFNLVDP E
Sbjct: 435 LYKLPYNSTVQVVLQDTGNVAPENHPIHLHGFNFFVVGLGTGNYNSKKDSNKFNLVDPVE 494
Query: 497 RNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIV 540
RNTVGVPSGGW AIRF ADNPGVWFMHCHLEVHT+WGLKMA++V
Sbjct: 495 RNTVGVPSGGWAAIRFRADNPGVWFMHCHLEVHTTWGLKMAFLV 538
|
|
| TAIR|locus:2194110 LAC1 "laccase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 750 (269.1 bits), Expect = 1.7e-150, Sum P(2) = 1.7e-150
Identities = 131/230 (56%), Positives = 167/230 (72%)
Query: 37 TRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHG 96
TR + F+++ + +TRLC TK ++TVNGQ+PGP + EGD + I+V N + +N TIHWHG
Sbjct: 28 TRRFHFNVEWKKVTRLCHTKQLLTVNGQYPGPTVAVHEGDIVEIKVTNRIAHNTTIHWHG 87
Query: 97 VRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIIILP 156
+RQ R+GWADGPAY+TQCPI++ QSY Y F V QRGTL WHAH SW RA++YG II P
Sbjct: 88 LRQYRTGWADGPAYITQCPIRSKQSYTYRFKVEDQRGTLLWHAHHSWQRASVYGAFIIYP 147
Query: 157 KQQASYPFPQPF--EEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYN 214
+Q YPF E+PII GEWW D + + M+TG +SDA+T+NGLPGP Y
Sbjct: 148 RQP--YPFSGSHIQSEIPIILGEWWNDDVDNVEKAMMKTGAGAKVSDAYTLNGLPGPLYP 205
Query: 215 CAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAK 264
C+ KDTF V GKTY+LR+INAALN+ELF ++ANHTLT+VE DAVY K
Sbjct: 206 CSTKDTFTATVDAGKTYILRIINAALNNELFVAVANHTLTVVEVDAVYTK 255
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| TAIR|locus:2063109 LAC5 "laccase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 769 (275.8 bits), Expect = 7.4e-150, Sum P(2) = 7.4e-150
Identities = 131/254 (51%), Positives = 180/254 (70%)
Query: 16 FLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREG 75
F+ F A + S +A A H++F I+ + RLC+T + +TVNG FPGP ++ G
Sbjct: 10 FISFVAFLLFSSVAEANK---AHHHEFIIQATKVKRLCETHNSITVNGMFPGPMLVVNNG 66
Query: 76 DRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTL 135
D L+++VIN +YN+TIHWHGVRQ+R+GWADGP +VTQCPI+ G SY Y FT+ GQ GTL
Sbjct: 67 DTLVVKVINRARYNITIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTL 126
Query: 136 FWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGG 195
+WHAH SWLRAT+YG +++ P +SYPF +P VP++ GEWW A+ ++ E+++TGG
Sbjct: 127 WWHAHSSWLRATVYGSLLVFPPAGSSYPFTKPHRNVPLLLGEWWDANPVDVLRESIRTGG 186
Query: 196 APNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTI 255
APN SDA+TING PG Y C+++DT + + G+T LLR+IN+ALN LFF++ANH LT+
Sbjct: 187 APNNSDAYTINGQPGDLYKCSSQDTTVVPINVGETILLRVINSALNQPLFFTVANHKLTV 246
Query: 256 VETDAVYAKSKAPN 269
V DA Y K N
Sbjct: 247 VGADASYLKPFTTN 260
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| TAIR|locus:2060879 LAC3 "laccase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 719 (258.2 bits), Expect = 2.1e-141, Sum P(2) = 2.1e-141
Identities = 128/258 (49%), Positives = 171/258 (66%)
Query: 13 RATFLGFFALWI-LSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRII 71
R + L F AL + LA A+H ++F I + RLC+T +TVNGQ+PGP ++
Sbjct: 6 RFSLLSFIALLAYFAFLASAEHHV----HQFVITPTPVKRLCRTHQSITVNGQYPGPTLV 61
Query: 72 AREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131
R GD L I VIN +YN++IHWHG+RQLR+ WADGP Y+TQCPI+ GQ+Y Y F + Q
Sbjct: 62 VRNGDSLAITVINRARYNISIHWHGIRQLRNPWADGPEYITQCPIRPGQTYTYRFKIEDQ 121
Query: 132 RGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAM 191
GTL+WHAH WLRAT+YG +II P+ + YPF P ++PI+ GEWW + ++ +A
Sbjct: 122 EGTLWWHAHSRWLRATVYGALIIYPRLGSPYPFSMPKRDIPILLGEWWDRNPMDVLKQAQ 181
Query: 192 QTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANH 251
TG A N+SDA+TING PG Y C+ T + + PG+T LR+INA +N ELFFS+ANH
Sbjct: 182 FTGAAANVSDAYTINGQPGDLYRCSRAGTIRFPIFPGETVQLRVINAGMNQELFFSVANH 241
Query: 252 TLTIVETDAVYAKSKAPN 269
T+VETD+ Y K N
Sbjct: 242 QFTVVETDSAYTKPFTTN 259
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| TAIR|locus:2182895 LAC13 "laccase 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 699 (251.1 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 131/289 (45%), Positives = 182/289 (62%)
Query: 257 ETDAVYAKSKAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTK-NXXXXXXXX 315
+T V + P A++ +AA Y + A+FDNTTT +L+Y + +T +
Sbjct: 265 QTTDVLLTADQPPAHYYMAAHAYNSANAAFDNTTTTAILKYKDASCVTLQAKSQARAIPA 324
Query: 316 XXXXFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCP--QNQTCQGP 373
FNDT F+ +++S +K KVP+++D FFTVGLGL CP Q CQGP
Sbjct: 325 QLPGFNDTATAAAFTAQMKS--PSK--VKVPLEIDENLFFTVGLGLFNCPTPNTQRCQGP 380
Query: 374 NNTKLAASVNNVSFVQPNV-ALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNI-MV 431
N T+ AS+NNVSFV P +++QA++ GV+TTDFP PP F+YTG +
Sbjct: 381 NGTRFTASINNVSFVFPKQNSIMQAYYQGTPTGVFTTDFPPTPPVTFDYTGNVSRGLWQP 440
Query: 432 SSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNL 491
+ GTK L FN+ V++++QDTSI+ E+HP+HLHG+ F+VV G GNF+PN D + FNL
Sbjct: 441 TRGTKAYKLKFNSQVQIILQDTSIVTTENHPMHLHGYEFYVVGTGVGNFNPNTDTSSFNL 500
Query: 492 VDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIV 540
+DP RNT+G P GGWVAIRF+A+NPG W MHCH++ H WGL M ++V
Sbjct: 501 IDPPRRNTIGTPPGGWVAIRFVANNPGAWLMHCHIDSHIFWGLAMVFLV 549
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| TAIR|locus:2153469 LAC12 "laccase 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1362 (484.5 bits), Expect = 3.5e-139, P = 3.5e-139
Identities = 266/548 (48%), Positives = 351/548 (64%)
Query: 15 TFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIARE 74
+ L FF + L +AK +H+ F I+ + RLC+T++ +TVNG FPGP +
Sbjct: 8 SILLFFCSLFSASLIIAK----VQHHDFVIQETPVKRLCKTRNAITVNGMFPGPTLEVNN 63
Query: 75 GDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGT 134
GD L ++V N +YN+TIHWHGVRQ+R+GWADGP +VTQCPI+ G+SY Y FT+ GQ GT
Sbjct: 64 GDTLEVKVHNRARYNITIHWHGVRQIRTGWADGPEFVTQCPIRPGKSYTYRFTIQGQEGT 123
Query: 135 LFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTG 194
L+WHAH SWLRAT+YG +II P +S+PFP+P + ++ GEWW A+ +IN+A +TG
Sbjct: 124 LWWHAHSSWLRATVYGALIIHPTPGSSFPFPKPDRQTALMLGEWWNANPVDVINQATRTG 183
Query: 195 GAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLT 254
APNISDA+TING PG YNC+ K+T + + G+T LLR+INAALN LFF++ANH LT
Sbjct: 184 AAPNISDAYTINGQPGDLYNCSTKETVVVPINSGETSLLRVINAALNQPLFFTVANHKLT 243
Query: 255 IVETDAVYAK---SKA----PNAN---FLIAARP---YATGPASFDNTTTAGVLEYDQPN 301
+V DA Y K +K P L A +P Y ++ + A
Sbjct: 244 VVGADASYLKPFTTKVLMLGPGQTTDVLLTADQPPKRYYIAARAYQSAQNAPFDNTTTTA 303
Query: 302 GITTKNXXXXXXXXXXX--XFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGL 359
+ K FNDTN V FS+K +SL VP +D FFT+GL
Sbjct: 304 ILQYKKTTTTSKPIMPVLPAFNDTNTVTSFSRKFKSLRNVV----VPKTIDDNLFFTIGL 359
Query: 360 GLSPCPQN---QTCQGPNNTKLAASVNNVSFVQP-NVALLQAHFFNRSKGVYTTDFPANP 415
GL CP+ CQG N T+ AS+NNVSFV P N +LLQAH N GV+TTDFP+ P
Sbjct: 360 GLDNCPKKFPKSRCQGLNGTRFTASMNNVSFVLPSNFSLLQAHS-NGIPGVFTTDFPSKP 418
Query: 416 PFKFNYTGTPPSNIMVS--SGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVV 473
P KF+YTG S + GTK+ L + + V+VV+QDT+I+ +E+HP+HLHG++F++V
Sbjct: 419 PVKFDYTGNNISRALFQPVKGTKLYKLKYGSRVQVVLQDTNIVTSENHPIHLHGYDFYIV 478
Query: 474 AQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWG 533
+GFGNF+P KD +KFNLVDP RNTV VP GW IRF+ADNPGVW MHCHL+VH WG
Sbjct: 479 GEGFGNFNPKKDTSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGVWLMHCHLDVHIKWG 538
Query: 534 LKMAWIVN 541
L MA++V+
Sbjct: 539 LAMAFLVD 546
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q5N9X2 | LAC4_ORYSJ | 1, ., 1, 0, ., 3, ., 2 | 0.6708 | 0.9446 | 0.9136 | yes | no |
| Q9FJD5 | LAC17_ARATH | 1, ., 1, 0, ., 3, ., 2 | 0.6738 | 0.9357 | 0.9081 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| LAC110c | laccase 110c (579 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 560 | |||
| TIGR03389 | 539 | TIGR03389, laccase, laccase, plant | 0.0 | |
| TIGR03388 | 541 | TIGR03388, ascorbase, L-ascorbate oxidase, plant t | 8e-87 | |
| PLN02604 | 566 | PLN02604, PLN02604, oxidoreductase | 4e-74 | |
| PLN02191 | 574 | PLN02191, PLN02191, L-ascorbate oxidase | 9e-69 | |
| pfam07732 | 119 | pfam07732, Cu-oxidase_3, Multicopper oxidase | 4e-56 | |
| PLN02168 | 545 | PLN02168, PLN02168, copper ion binding / pectinest | 8e-49 | |
| PLN02991 | 543 | PLN02991, PLN02991, oxidoreductase | 9e-43 | |
| pfam07731 | 135 | pfam07731, Cu-oxidase_2, Multicopper oxidase | 2e-41 | |
| PLN02835 | 539 | PLN02835, PLN02835, oxidoreductase | 6e-38 | |
| COG2132 | 451 | COG2132, SufI, Putative multicopper oxidases [Seco | 4e-37 | |
| PLN00044 | 596 | PLN00044, PLN00044, multi-copper oxidase-related p | 4e-36 | |
| PLN02792 | 536 | PLN02792, PLN02792, oxidoreductase | 3e-34 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 3e-32 | |
| PLN02354 | 552 | PLN02354, PLN02354, copper ion binding / oxidoredu | 9e-26 | |
| TIGR03390 | 538 | TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu | 1e-25 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 1e-14 | |
| TIGR03390 | 538 | TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu | 2e-12 | |
| PLN02354 | 552 | PLN02354, PLN02354, copper ion binding / oxidoredu | 5e-11 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 3e-07 | |
| PRK10965 | 523 | PRK10965, PRK10965, multicopper oxidase; Provision | 5e-05 | |
| TIGR02376 | 311 | TIGR02376, Cu_nitrite_red, nitrite reductase, copp | 0.003 |
| >gnl|CDD|234194 TIGR03389, laccase, laccase, plant | Back alignment and domain information |
|---|
Score = 886 bits (2292), Expect = 0.0
Identities = 359/547 (65%), Positives = 426/547 (77%), Gaps = 29/547 (5%)
Query: 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHW 94
RHY F ++ +N+TRLC TKSI+TVNG+FPGP + AREGD +++ V NNV+YNVTIHW
Sbjct: 1 AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHW 60
Query: 95 HGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIII 154
HGVRQLR+GWADGPAY+TQCPIQ GQSYVYNFT+TGQRGTL+WHAHISWLRAT+YG I+I
Sbjct: 61 HGVRQLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVI 120
Query: 155 LPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYN 214
LPK YPFP+P EVPII GEWW AD E +IN+A QTGGAPN+SDA+TING PGP YN
Sbjct: 121 LPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYN 180
Query: 215 CAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAK---------- 264
C++KDTFKL V PGKTYLLR+INAALNDELFF+IANHTLT+VE DA Y K
Sbjct: 181 CSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240
Query: 265 ----------SKAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPA 314
+ + +AARPY P +FDNTTT +L+Y + LP
Sbjct: 241 PGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPT---- 296
Query: 315 AILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPN 374
LP +NDT FS K+RSL +A++PA VP+ +DRR FFT+GLGL PCP N TCQGPN
Sbjct: 297 --LPAYNDTAAATNFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNN-TCQGPN 353
Query: 375 NTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTP-PSNIMVSS 433
T+ AAS+NN+SFV P ALLQAH+F GV+TTDFPANPP KFNYTGT P+N+ ++
Sbjct: 354 GTRFAASMNNISFVMPTTALLQAHYFG-ISGVFTTDFPANPPTKFNYTGTNLPNNLFTTN 412
Query: 434 GTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVD 493
GTKVV L FN++VE+V+QDTSI+ +E+HP+HLHG+NFFVV GFGNFDP KDPAKFNLVD
Sbjct: 413 GTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVD 472
Query: 494 PAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPP 553
P ERNTVGVP+GGW AIRF+ADNPGVWFMHCHLEVHT+WGLKMA++V++GKGP Q L PP
Sbjct: 473 PPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPP 532
Query: 554 PSDLPKC 560
PSDLP C
Sbjct: 533 PSDLPSC 539
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Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539 |
| >gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Score = 278 bits (713), Expect = 8e-87
Identities = 179/571 (31%), Positives = 257/571 (45%), Gaps = 93/571 (16%)
Query: 37 TRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINN-VKYNVTIHWH 95
RHYK+ ++ + + C K ++ +NGQFPGP I A+ GD +++ + N V IHWH
Sbjct: 1 IRHYKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWH 60
Query: 96 GVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIII 154
G+RQ+ + WADG A VTQC I G++++YNF V + GT F+H H R A LYG +I+
Sbjct: 61 GIRQIGTPWADGTAGVTQCAINPGETFIYNFVVD-RPGTYFYHGHYGMQRSAGLYGSLIV 119
Query: 155 LPKQQASYPFPQPFEEVPIIFGEWWKADTET----IINEAMQTGGAP-----------NI 199
PF E ++ +WW + ++ M+ G P N
Sbjct: 120 DVPDGEKEPFHYDGE-FNLLLSDWWHKSIHEQEVGLSSKPMRWIGEPQSLLINGRGQFNC 178
Query: 200 SDAFTINGLPGPFYNCAAKDT-----FKLKVTPGKTYLLRMIN----AALNDELFFSIAN 250
S A + P C K L V PGKTY LR+ + AALN F+I
Sbjct: 179 SLAAKFSSTNLP--QCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALN----FAIEG 232
Query: 251 HTLTIVETDAVYAK---------------------SKAPNANFLIAARPYATGPASFDNT 289
H LT+VE D Y + + P+ N+ I+ P NT
Sbjct: 233 HKLTVVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKP----NT 288
Query: 290 TTA-GVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMK 348
VL Y PN + LP P P ++D + FS I++ + P P
Sbjct: 289 PPGLTVLNY-YPN--SPSRLPPTPPPVT-PAWDDFDRSKAFSLAIKAAMGSPKP---PET 341
Query: 349 VDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYT 408
DRR Q N ++NNVS P+ L + +N
Sbjct: 342 SDRRIVLL------------NTQNKINGYTKWAINNVSLTLPHTPYLGSLKYN-----LL 384
Query: 409 TDFPANPP---FKFNY-TGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSII---VAESH 461
F PP + +Y PP N ++G + L FN +V+V++Q+ + + +E+H
Sbjct: 385 NAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETH 444
Query: 462 PLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWF 521
P HLHG +F+V+ G G F P D +NL +P RNTV + GW A+RF+ADNPGVW
Sbjct: 445 PWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWA 504
Query: 522 MHCHLEVHTSWGLKMAWIVNDGKGPKQKLPP 552
HCH+E H G M + +G KLP
Sbjct: 505 FHCHIEPHLHMG--MGVVFAEGVEKVGKLPK 533
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Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. Length = 541 |
| >gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase | Back alignment and domain information |
|---|
Score = 245 bits (628), Expect = 4e-74
Identities = 180/565 (31%), Positives = 260/565 (46%), Gaps = 77/565 (13%)
Query: 19 FFALWIL--SELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGD 76
F AL+ L S L E R YK+ +K + + C K ++T+NG+ PGP I+A++GD
Sbjct: 4 FLALFFLLFSVLNFPAAEARIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGD 63
Query: 77 RLLIRVINNV-KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTL 135
+++ + N++ NV IHWHG+RQ+ + W DG VTQCPI G+++ Y F V + GT
Sbjct: 64 TVIVELKNSLLTENVAIHWHGIRQIGTPWFDGTEGVTQCPILPGETFTYEFVVD-RPGTY 122
Query: 136 FWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTG 194
+HAH R A LYG I + + S PF ++ II +W+ T Q
Sbjct: 123 LYHAHYGMQREAGLYGSIRVSLPRGKSEPFSYDYDR-SIILTDWYHKSTYE------QAL 175
Query: 195 GAPNISDAFTINGLPGPF-------YNCAAKDT-----------------FKLKVTPGKT 230
G +I F G P YNC+ + + L V PGKT
Sbjct: 176 GLSSIP--FDWVGEPQSLLIQGKGRYNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKT 233
Query: 231 YLLRMINAALNDELFFSIANHTLTIVETDAVYAKSKAPNANFLIAARPYA---------- 280
Y LR+ + L F I H +T+VE D Y + F+ + Y+
Sbjct: 234 YRLRISSLTALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPS 293
Query: 281 ------TGPASFDNTTTAG--VLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKK 332
T S +NTT G + Y PN ++ P + P+ L +ND + S
Sbjct: 294 RNYWVTTSVVSRNNTTPPGLAIFNY-YPNH-PRRSPPTVPPSGPL--WNDVEPRLNQSLA 349
Query: 333 IRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNV 392
I+ A + P+ DR Q N SVNNVSF P+
Sbjct: 350 IK--ARHGYIHPPPLTSDRVIVLL------------NTQNEVNGYRRWSVNNVSFNLPHT 395
Query: 393 ALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQD 452
L A N + T P F P+N +S + L FN++V++++Q+
Sbjct: 396 PYLIALKENLTGAFDQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQN 455
Query: 453 TSIIVA---ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVA 509
+ + A E+HP HLHG +F+V+ G G F+ + DP K+NLVDP +NTV V GW A
Sbjct: 456 ANTMNANNSETHPWHLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTA 515
Query: 510 IRFLADNPGVWFMHCHLEVHTSWGL 534
+RF ADNPGVW HCH+E H G+
Sbjct: 516 LRFRADNPGVWAFHCHIESHFFMGM 540
|
Length = 566 |
| >gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 9e-69
Identities = 172/573 (30%), Positives = 259/573 (45%), Gaps = 90/573 (15%)
Query: 23 WILSELALAKH--EGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLI 80
WI++ +A+ H R Y + ++ + C+ +++TVNGQFPGP I A GD +++
Sbjct: 7 WIVTVVAVLTHTASAAVREYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVV 66
Query: 81 RVINNVKYN-VTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHA 139
+ N + + IHWHG+RQ S WADG A VTQC I G+++ Y FTV + GT F+H
Sbjct: 67 HLTNKLTTEGLVIHWHGIRQKGSPWADGAAGVTQCAINPGETFTYKFTVE-KPGTHFYHG 125
Query: 140 HISWLRAT-LYGPIIIL----PKQQASYPFPQPFEEVPIIFGEWWK----ADTETIINEA 190
H R+ LYG +I+ PK++ Y E ++ +WW + + ++
Sbjct: 126 HYGMQRSAGLYGSLIVDVAKGPKERLRYD-----GEFNLLLSDWWHESIPSQELGLSSKP 180
Query: 191 MQTGGAPNISDAFTING-------LPGPFYNCAAKD--TFK---------LKVTPGKTYL 232
M+ G + ING L F N TFK L+V P KTY
Sbjct: 181 MRWIGEAQ---SILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYR 237
Query: 233 LRMINAALNDELFFSIANHTLTIVETDAVY---------------------AKSKAPNAN 271
+R+ + L ++ H L +VE D Y + P+ N
Sbjct: 238 IRLASTTALASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQN 297
Query: 272 FLIAARPYATGPASFDNTTTA-GVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFS 330
+ I+ P NTT A +L Y LP P + P+++D FS
Sbjct: 298 YYISVGVRGRKP----NTTQALTILNYVTA---PASKLPS-SPPPVTPRWDDFERSKNFS 349
Query: 331 KKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQP 390
KKI S A P K +R Q + ++NNVS V P
Sbjct: 350 KKIFS---AMGSPSPPKKYRKRLILL------------NTQNLIDGYTKWAINNVSLVTP 394
Query: 391 NVALLQAHFFNRSKGVYTTDFPANPPFKFNY-TGTPPSNIMVSSGTKVVVLPFNASVEVV 449
L + +N G + P ++ +Y PP ++G + V PFN +V+V+
Sbjct: 395 ATPYLGSVKYNLKLG-FNRKSPPRS-YRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVI 452
Query: 450 MQDTSI---IVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGG 506
+Q+ ++ +V+E HP HLHG +F+V+ G G F P D +NL +P RNT + G
Sbjct: 453 IQNANVLKGVVSEIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYG 512
Query: 507 WVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWI 539
W AIRF+ DNPGVWF HCH+E H G+ + +
Sbjct: 513 WTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFA 545
|
Length = 574 |
| >gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 183 bits (468), Expect = 4e-56
Identities = 58/118 (49%), Positives = 75/118 (63%), Gaps = 2/118 (1%)
Query: 43 HIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRS 102
+ +T L T+ ++ VNGQFPGP I REGD +++ V NN+ TIHWHG+RQ +
Sbjct: 1 TVTYGTVTPLGGTRQVIGVNGQFPGPTIRVREGDTVVVNVTNNLDEPTTIHWHGLRQPGT 60
Query: 103 GWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR--ATLYGPIIILPKQ 158
WADG VTQCPI G+S+ Y FTV Q GT ++H+H SWL+ A LYG III
Sbjct: 61 PWADGVPGVTQCPIPPGESFTYRFTVKQQAGTYWYHSHTSWLQQAAGLYGAIIIEDPA 118
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 119 |
| >gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 8e-49
Identities = 145/536 (27%), Positives = 222/536 (41%), Gaps = 68/536 (12%)
Query: 12 LRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRII 71
+R F+ F L L L L+ Y++ + L K ++ +N FPGP +
Sbjct: 1 MRHVFVEVFVLISLVILELSYAFAPIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLN 60
Query: 72 AREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131
A D + + + NN+ + W+G++ ++ W DG T CPI G ++ Y F V Q
Sbjct: 61 ATANDVINVNIFNNLTEPFLMTWNGLQLRKNSWQDG-VRGTNCPILPGTNWTYRFQVKDQ 119
Query: 132 RGTLFWHAHISWLRAT-LYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEA 190
G+ F+ + +A YG I I + PFP+P EE I+ G+W+ AD T++ +
Sbjct: 120 IGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYAD-HTVMRAS 178
Query: 191 MQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIAN 250
+ G + D NG GP ++TF PGKTY LR+ N L L F I +
Sbjct: 179 LDNGHSLPNPDGILFNG-RGP------EETF-FAFEPGKTYRLRISNVGLKTCLNFRIQD 230
Query: 251 HTLTIVETDAVYAKSKAPNA---------NFLIAARP---------YATGPASFDNTTTA 292
H + +VET+ Y + + ++ + L+ A+ Y A F +
Sbjct: 231 HDMLLVETEGTYVQKRVYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTDAYLG 290
Query: 293 GVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVP------ 346
GV PN L + P + P +D ++ + IR P
Sbjct: 291 GVALIRYPN----SPLDPVGPLPLAPALHDYFSSVEQALSIRMDLNVGAARSNPQGSYHY 346
Query: 347 --MKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSK 404
+ V R + LS + KL ++N VSFV P L F +
Sbjct: 347 GRINVTRTIILHNDVMLS------------SGKLRYTINGVSFVYPGTPLKLVDHFQLND 394
Query: 405 GVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLH 464
+ FP PSN + GT VV + + +V Q+ + H
Sbjct: 395 TIIPGMFPVY-----------PSNKTPTLGTSVVDIHYKDFYHIVFQNP---LFSLESYH 440
Query: 465 LHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVW 520
+ G+NFFVV GFG + +K A +NLVD R+TV V W AI DN G+W
Sbjct: 441 IDGYNFFVVGYGFGAWSESKK-AGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMW 495
|
Length = 545 |
| >gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 9e-43
Identities = 147/545 (26%), Positives = 232/545 (42%), Gaps = 76/545 (13%)
Query: 7 LRSAILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFP 66
++S A LG L ++ E R +++H+ NI+ L + + +NG+FP
Sbjct: 3 VKSVNTTAMILGLLFL-----ISFVAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFP 57
Query: 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNF 126
GP II+ D L+I V N++ I W G+R R+ + DG Y T CPI G++Y Y
Sbjct: 58 GPDIISVTNDNLIINVFNHLDEPFLISWSGIRNWRNSYQDG-VYGTTCPIPPGKNYTYAL 116
Query: 127 TVTGQRGTLFWHAHISWLRAT-LYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTET 185
V Q G+ ++ + + +A +G I I + PFP P ++ ++ G+W+K + +
Sbjct: 117 QVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKD 176
Query: 186 IINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELF 245
+ + GG + D ING L + PGKTY LR+ N L + L
Sbjct: 177 -LRAQLDNGGKLPLPDGILING---------RGSGATLNIEPGKTYRLRISNVGLQNSLN 226
Query: 246 FSIANHTLTIVETDAVYAKSK---------APNANFLIAA-RP----YATGPASFDNT-- 289
F I NHT+ +VE + + + + LI A +P Y + F +
Sbjct: 227 FRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKIL 286
Query: 290 TTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVP--- 346
T GVL Y G + +P P + F+ ++ I++ TA P P
Sbjct: 287 ITTGVLHYSNSAGPVSGPIP-DGPIQLSWSFDQ-------ARAIKTNLTASGPRPNPQGS 338
Query: 347 -----MKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFN 401
+ + R T+ L S G K +VN+ SF + L A +F
Sbjct: 339 YHYGKINITR----TIRLANS--------AGNIEGKQRYAVNSASFYPADTPLKLADYF- 385
Query: 402 RSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESH 461
+ GVY P + P + P+N + T V+ + A VE+V ++ IV
Sbjct: 386 KIAGVYN---PGSIPDQ-------PTNGAIFPVTSVMQTDYKAFVEIVFENWEDIV---Q 432
Query: 462 PLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWF 521
HL G++F+VV G + +NL D R TV V W AI DN G+W
Sbjct: 433 TWHLDGYSFYVVGMELGKWSAASRKV-YNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWN 491
Query: 522 MHCHL 526
+ L
Sbjct: 492 LRSEL 496
|
Length = 543 |
| >gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 2e-41
Identities = 58/140 (41%), Positives = 75/140 (53%), Gaps = 12/140 (8%)
Query: 410 DFPANPPFKFNYTGT------PPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPL 463
D P P TG P N T+V+ LP VE+V+Q+ + HP
Sbjct: 1 DTPPKLPTLLQITGGNDRANWSPDNGPPLGTTEVITLPNGDRVEIVLQNNT---MGPHPF 57
Query: 464 HLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMH 523
HLHG +F V+ +G G + P A +NLVDP R+TV VP GGWVAIRF ADNPG W H
Sbjct: 58 HLHGHSFQVLGRGGGPWTPT---ATYNLVDPVRRDTVQVPPGGWVAIRFKADNPGPWLFH 114
Query: 524 CHLEVHTSWGLKMAWIVNDG 543
CH+ H G+ ++V+ G
Sbjct: 115 CHILWHLDQGMMGQFVVDPG 134
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135 |
| >gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 6e-38
Identities = 135/541 (24%), Positives = 226/541 (41%), Gaps = 77/541 (14%)
Query: 9 SAILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGP 68
SA+ LG A+ LS ++L E ++Y + + I+ L + ++ +NGQFPGP
Sbjct: 3 SAVNLHLLLGVLAV--LSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGP 60
Query: 69 RIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTV 128
R+ D +++ +IN + + W+G++Q ++ W DG T CPI +Y Y F
Sbjct: 61 RLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQT 119
Query: 129 TGQRGTLFWHAHISWLRAT-LYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETII 187
Q GT + + +A +G I + + + PFP P + ++ G+W+K +T +
Sbjct: 120 KDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKT-L 178
Query: 188 NEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFS 247
+ + +G D ING + TF GKTY+ R+ N L+ L F
Sbjct: 179 QQRLDSGKVLPFPDGVLING--------QTQSTF--SGDQGKTYMFRISNVGLSTSLNFR 228
Query: 248 IANHTLTIVETDAVY---------------------AKSKAPNANFLIAARPYATGPASF 286
I HT+ +VE + + +++P +++A+ +
Sbjct: 229 IQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTR----- 283
Query: 287 DNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVP 346
T VL Y + LP L + ++ M+ ++ R TA P
Sbjct: 284 QILTATAVLHYSNSRTPASGPLPALPSGEL-------HWSMRQARTYRWNLTASAARPNP 336
Query: 347 MKVDRRFFFTVGLGLSPCPQNQTCQGPN-----NTKLAASVNNVSFVQPNVALLQAHFFN 401
F G ++P +T N N K +VN VS+V + L A +F
Sbjct: 337 QGS-----FHYGK-ITP---TKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFG 387
Query: 402 RSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESH 461
GV++ + + P +G P T V+ + +EVV Q+ +
Sbjct: 388 IP-GVFSVNSIQSLP-----SGGPA-----FVATSVMQTSLHDFLEVVFQNNEKTM---Q 433
Query: 462 PLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWF 521
HL G++F+VV G G + P K + +NLVD R+T V W I DN G+W
Sbjct: 434 SWHLDGYDFWVVGYGSGQWTPAKR-SLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWN 492
Query: 522 M 522
M
Sbjct: 493 M 493
|
Length = 539 |
| >gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 143 bits (361), Expect = 4e-37
Identities = 103/533 (19%), Positives = 160/533 (30%), Gaps = 97/533 (18%)
Query: 5 LLLRSAILRATFLGFFALWILSELALAKHEGITR-HYKFHIKMQNITRLCQTKSIVTVNG 63
L SA L + L + + T ++ NG
Sbjct: 4 FLKGSAALGVAGALTLPIPPLLLTRAGGMARTFLTAQRAQLAFAPGTGA----TVWGYNG 59
Query: 64 QFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYV 123
PGP I ++GD + + + N + + ++HWHG+ G DG +TQ P G++
Sbjct: 60 ALPGPTIRVKKGDTVTLDLTNRLLVDTSVHWHGLPV--PGEMDGVPPLTQIPPGPGETPT 117
Query: 124 YNFTVTGQRGTLFWHAHI-SWLRATLYGPIIILPKQQASYPFPQPFEEVPIIF-GEWWKA 181
Y FT GT ++H H + L G +II + P ++ P+I +W
Sbjct: 118 YTFTQD-VPGTYWYHPHTHGQVYDGLAGALIIEDEN----SEPLGVDDEPVILQDDWLDE 172
Query: 182 DTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALN 241
D + E GG P D +NG PF K PG LR++NA
Sbjct: 173 DGTDLYQEGPAMGGFPG--DTLLVNGAILPF-----------KAVPGGVVRLRLLNAGNA 219
Query: 242 DELFFSIANHTLTIVETDAVYAKSKAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPN 301
++ LT++ D + + +L Y D V
Sbjct: 220 RTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVDMNDGGA---VTLTALGE 276
Query: 302 GITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGL 361
+ P IL + A V + V+
Sbjct: 277 DMPDTLKGFRAPNPILTPSYPVLNGRVGAPTGDMADHAPVGLLVTILVE----------- 325
Query: 362 SPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNY 421
GPN + + + F N
Sbjct: 326 ---------PGPNRDTDFHLIGGIGGYVWAIN--------------GKAFDDNRV----- 357
Query: 422 TGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFD 481
++ V+ + HP HLHG F V++
Sbjct: 358 ---------------TLIAKAGTRERWVL---TNDTPMPHPFHLHGHFFQVLSGD----- 394
Query: 482 PNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGL 534
A P ++TV V G + +RF AD PG W HCH+ H G+
Sbjct: 395 -----APAPGAAPGWKDTVLVAPGERLLVRFDADYPGPWMFHCHILEHEDNGM 442
|
Length = 451 |
| >gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Score = 142 bits (358), Expect = 4e-36
Identities = 132/513 (25%), Positives = 201/513 (39%), Gaps = 95/513 (18%)
Query: 56 KSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCP 115
+ + +NGQFPGP + L++ V N + + + WHGV+Q +S W DG T C
Sbjct: 48 QEAIGINGQFPGPALNVTTNWNLVVNVRNALDEPLLLTWHGVQQRKSAWQDG-VGGTNCA 106
Query: 116 IQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LYGPIIILPKQQASYPFPQP-FEEVPI 173
I G ++ Y F V Q G+ F+ + RA YG I I + PF P ++ +
Sbjct: 107 IPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITL 166
Query: 174 IFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPF-YNCAAKDTF--------KLK 224
+W+ D + A+ G D IN GP+ YN D+ ++
Sbjct: 167 FIADWYARDHRA-LRRALDAGDLLGAPDGVLINAF-GPYQYN----DSLVPPGITYERIN 220
Query: 225 VTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS------------------- 265
V PGKTY R+ N + L F I H L +VE + Y
Sbjct: 221 VDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLT 280
Query: 266 --KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDT 323
+ + ++ + A A D T +L Y G + LP DT
Sbjct: 281 MDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASGPLPDAPDDQY-----DT 335
Query: 324 NFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQG----------- 372
F + ++ IR TA G P PQ G
Sbjct: 336 AFSINQARSIRWNVTAS-------------------GARPNPQGSFHYGDITVTDVYLLQ 376
Query: 373 ---PN--NTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPS 427
P + KL A++N +S++ P+ L+ A FN GV+ DFP +P + P
Sbjct: 377 SMAPELIDGKLRATLNEISYIAPSTPLMLAQIFN-VPGVFKLDFPNHPMNRL-----PKL 430
Query: 428 NIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPA 487
+ + +GT + +E++ Q+ + V HL G+ FFVV +G + N
Sbjct: 431 DTSIINGT------YKGFMEIIFQNNATNV---QSYHLDGYAFFVVGMDYGLWTDNSR-G 480
Query: 488 KFNLVDPAERNTVGVPSGGWVAIRFLADNPGVW 520
+N D R+T+ V G W AI DN G+W
Sbjct: 481 TYNKWDGVARSTIQVFPGAWTAILVFLDNAGIW 513
|
Length = 596 |
| >gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 3e-34
Identities = 129/515 (25%), Positives = 208/515 (40%), Gaps = 78/515 (15%)
Query: 37 TRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHG 96
T Y + + NI+ L + + +NGQFPGP I + D L+I V N++ + W+G
Sbjct: 16 TLFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLSWNG 75
Query: 97 VRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LYGPIIIL 155
V ++ + DG Y T CPI G++Y Y+F V Q G+ F+ ++ +A YG + I
Sbjct: 76 VHMRKNSYQDG-VYGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIY 134
Query: 156 PKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGG--APNISDAFTINGLPGPFY 213
+ PFP+P + + G+W++ + T+ + + GG P + D ING
Sbjct: 135 SLPRIPVPFPEPAGDFTFLIGDWYRRNHTTL--KKILDGGRKLPLMPDGVMINGQ----- 187
Query: 214 NCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKSKAPNANFL 273
+ + V GKTY R+ N L L F I H L ++E + + + +
Sbjct: 188 --GVSYVYSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMYTSLDI 245
Query: 274 IAARPYAT------GPASFD----------NTTTAGVLEYDQPNGITTKNLPLLKPAAIL 317
+ Y+ P ++ + L Y G K + +P
Sbjct: 246 HVGQTYSVLVTMDQPPQNYSIVVSTRFIAAKVLVSSTLHYSNSKG--HKIIHARQPDP-- 301
Query: 318 PKFNDTNFVMQFSKKIRSLATAKFPAKVP--------MKVDRRFFFTVGLGLSPCPQNQT 369
+D + ++ ++ IR+ TA P P MK+ R L
Sbjct: 302 ---DDLEWSIKQAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAALV------- 351
Query: 370 CQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNI 429
K ++N VSFV + L A F + KGV+ G+ P
Sbjct: 352 -----KRKQRYAINGVSFVPSDTPLKLADHF-KIKGVFK-------------VGSIPDKP 392
Query: 430 MVSSG----TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKD 485
G T V+ NA +E++ Q+ IV HL G+NF+VV G +
Sbjct: 393 RRGGGMRLDTSVMGAHHNAFLEIIFQNREKIV---QSYHLDGYNFWVVGINKGIWS-RAS 448
Query: 486 PAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVW 520
++NL D R+T V W A+ DN G+W
Sbjct: 449 RREYNLKDAISRSTTQVYPESWTAVYVALDNVGMW 483
|
Length = 536 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 3e-32
Identities = 49/156 (31%), Positives = 63/156 (40%), Gaps = 34/156 (21%)
Query: 169 EEVPIIFGEWWKADTETIINEAMQ----TGGAPNISDAFTINGLPGPFYNCAAKDTFKLK 224
E+ I +W+ D + + E + P + DA ING G L
Sbjct: 1 EDYVITLSDWYHKDAKDLEKELLASGKAPTDFPPVPDAVLINGKDG-------ASLATLT 53
Query: 225 VTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYA--------------------K 264
VTPGKTY LR+IN AL+D L FSI H +T+VE D VY
Sbjct: 54 VTPGKTYRLRIINVALDDSLNFSIEGHKMTVVEVDGVYVNPFTVDSLDIFPGQRYSVLVT 113
Query: 265 SKAPNANFLIAARPYATGPASFDNTTTAGVLEYDQP 300
+ N+ I A P FDN T A +L Y
Sbjct: 114 ANQDPGNYWIVASPNIPA---FDNGTAAAILRYSGA 146
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 9e-26
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Query: 58 IVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQ 117
++ +NGQFPGP I + + ++I V NN+ + W G++Q ++ W DG T CPI
Sbjct: 48 VILINGQFPGPNINSTSNNNIVINVFNNLDEPFLLTWSGIQQRKNSWQDGVPG-TNCPIP 106
Query: 118 TGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LYGPIIILPKQQASYPFPQPFEEVPIIFG 176
G ++ Y+F Q G+ F++ RA +G + + + P+ P ++ ++ G
Sbjct: 107 PGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTVLIG 166
Query: 177 EWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMI 236
+W+ T + + + +G D ING G KD + PGKTY R+
Sbjct: 167 DWYTKS-HTALKKFLDSGRTLGRPDGVLINGKSG---KGDGKDEPLFTMKPGKTYRYRIC 222
Query: 237 NAALNDELFFSIANHTLTIVE 257
N L L F I H + +VE
Sbjct: 223 NVGLKSSLNFRIQGHKMKLVE 243
|
Length = 552 |
| >gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 1e-25
Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 48 NITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWAD 106
NI C ++ V VNG PGP I +EG IRV N++ NVT+HWHG+ Q + ++D
Sbjct: 19 NIKIACSSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSD 78
Query: 107 GPAYVTQCPIQTGQSYVYNFTVT-GQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFP 165
G +Q PI G + Y G G+ F+H+H+ + T +GP+I+ + Y +
Sbjct: 79 GTPLASQWPIPPGHFFDYEIKPEPGDAGSYFYHSHVGFQAVTAFGPLIVEDCEPPPYKYD 138
Query: 166 QPFEEVPIIFGEWWKADTETIINEAMQTGGA-PNISDAFTINGL---PGPFYNCAAKDTF 221
+E ++ +++ A E I + T ++A +NG + +
Sbjct: 139 ---DERILLVSDFFSATDEEIEQGLLSTPFTWSGETEAVLLNGKSGNKSFYAQINPSGSC 195
Query: 222 KL---KVTPGKTYLLRMINAALNDELFFSIANH-TLTIVETDAVYAK 264
L V PGKTY LR I A + I +H LTI+E D Y K
Sbjct: 196 MLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTK 242
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 76.5 bits (188), Expect = 1e-14
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 59 VTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQT 118
+TVNG PGP + REGD + +RV N + + +IHWHG+ L DG V+ I
Sbjct: 67 ITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGI--LLPFQMDGVPGVSFAGIAP 124
Query: 119 GQSYVYNFTVTGQRGTLFWHAHISWL-RATLYGPIIILPKQQASYPFPQPFEEVPIIFGE 177
G+++ Y F V Q GT ++H+H + +A LYGP+II P + + E ++ +
Sbjct: 125 GETFTYRFPVR-QSGTYWYHSHSGFQEQAGLYGPLIIDPAEPDPVRADR---EHVVLLSD 180
Query: 178 W 178
W
Sbjct: 181 W 181
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
| >gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 2e-12
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 446 VEVVMQDTSIIVA-----ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTV 500
+E+V Q+T ++HP H HG +F+ + G G ++ + AK P R+T
Sbjct: 422 LEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGDGEYNATANEAKLENYTPVLRDTT 481
Query: 501 -----------GVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542
G P+G W A R NPGVW MHCH+ H G++ W+ D
Sbjct: 482 MLYRYAVKVVPGAPAG-WRAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFGD 533
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538 |
| >gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 5e-11
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 371 QGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIM 430
+ KL ++N VS V P L A +F + V+ D + P P
Sbjct: 361 ASKVDGKLRYALNGVSHVDPETPLKLAEYFGVADKVFKYDTIKDNP--------PAKITK 412
Query: 431 VSSGTKVVVLPFNASVEVVMQ--DTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAK 488
+ V+ + F VE++ + + S+ HL G++FF VA G + P K
Sbjct: 413 IKIQPNVLNITFRTFVEIIFENHEKSM-----QSWHLDGYSFFAVAVEPGTWTPEKR-KN 466
Query: 489 FNLVDPAERNTVGVPSGGWVAIRFLADNPGVW 520
+NL+D R+TV V W AI DN G+W
Sbjct: 467 YNLLDAVSRHTVQVYPKSWAAILLTFDNAGMW 498
|
Length = 552 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 3e-07
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 448 VVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGW 507
V++ DT + +HP+HLHG + + G G F K +TV VP GG
Sbjct: 512 VLVNDTMM----AHPIHLHGM-WSELEDGQGEFQVRK-------------HTVDVPPGGK 553
Query: 508 VAIRFLADNPGVWFMHCHLEVHTSWGL 534
+ R AD G W HCH+ +H G+
Sbjct: 554 RSFRVTADALGRWAYHCHMLLHMEAGM 580
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
| >gnl|CDD|236810 PRK10965, PRK10965, multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 5e-05
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 61 VNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWAD-GPAYVTQCPIQTG 119
NG GP + + G + + + N + T+HWHG+ G D GP Q I G
Sbjct: 70 YNGNLLGPAVRLQRGKAVTVDITNQLPEETTLHWHGLEV--PGEVDGGP----QGIIAPG 123
Query: 120 QSYVYNFTVTGQRGTLFWHAH 140
FTV T ++H H
Sbjct: 124 GKRTVTFTVDQPAATCWFHPH 144
|
Length = 523 |
| >gnl|CDD|131429 TIGR02376, Cu_nitrite_red, nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 60 TVNGQFPGPRIIAREGDRLLIRVINN----VKYNVTIHWHGVRQLRSGWADGPAYVTQCP 115
T +G PGP I EGD + + +IN + +NV H + A G A +TQ
Sbjct: 51 TFDGSVPGPLIRVHEGDYVELTLINPPTNTMPHNVDFH-------AATGALGGAALTQ-- 101
Query: 116 IQTGQSYVYNFTVTGQRGTLFWHA--------HISWLRATLYGPIIILPKQ 158
+ G++ F T + G +H H+ + + G I++LP++
Sbjct: 102 VNPGETATLRFKAT-RPGAFVYHCAPPGMVPWHVV---SGMNGAIMVLPRE 148
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification [Central intermediary metabolism, Nitrogen metabolism]. Length = 311 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 560 | |||
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 100.0 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 100.0 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 100.0 | |
| PLN02792 | 536 | oxidoreductase | 100.0 | |
| PLN02835 | 539 | oxidoreductase | 100.0 | |
| PLN02991 | 543 | oxidoreductase | 100.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 100.0 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 100.0 | |
| PLN02191 | 574 | L-ascorbate oxidase | 100.0 | |
| PLN02604 | 566 | oxidoreductase | 100.0 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 100.0 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 100.0 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 100.0 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 100.0 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 100.0 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 100.0 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 100.0 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 100.0 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 99.96 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 99.83 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 99.76 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 99.59 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 99.46 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.34 | |
| PLN02604 | 566 | oxidoreductase | 98.92 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 98.81 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 98.65 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 98.56 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 98.54 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 98.42 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 98.38 | |
| PRK02710 | 119 | plastocyanin; Provisional | 98.36 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 98.27 | |
| PLN02191 | 574 | L-ascorbate oxidase | 98.2 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 98.13 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 98.09 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 98.08 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 97.93 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 97.9 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 97.86 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 97.85 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.71 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 97.69 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 97.68 | |
| PLN02835 | 539 | oxidoreductase | 97.62 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 97.58 | |
| PLN02792 | 536 | oxidoreductase | 97.48 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 97.47 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 97.44 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 97.42 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 97.4 | |
| PLN02991 | 543 | oxidoreductase | 97.19 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 97.12 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 97.01 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 96.99 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.73 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 96.69 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 96.6 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 96.12 | |
| PRK02710 | 119 | plastocyanin; Provisional | 96.09 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 95.85 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 95.1 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 93.98 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 93.72 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 93.47 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 93.18 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 91.34 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 90.88 | |
| PRK10378 | 375 | inactive ferrous ion transporter periplasmic prote | 89.5 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 88.94 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 88.31 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 88.16 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 86.43 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 82.44 | |
| COG1622 | 247 | CyoA Heme/copper-type cytochrome/quinol oxidases, | 82.29 |
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-103 Score=844.08 Aligned_cols=518 Identities=69% Similarity=1.268 Sum_probs=418.9
Q ss_pred CceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCcc
Q 008592 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQC 114 (560)
Q Consensus 35 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 114 (560)
+++|+|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||++|.+++|+||++++|||
T Consensus 1 ~~~r~y~~~it~~~~~pdG~~~~~~~~NG~~PGP~i~~~~GD~v~v~v~N~l~~~tsiHwHGl~q~~~~~~DGv~~vTq~ 80 (539)
T TIGR03389 1 AEVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQC 80 (539)
T ss_pred CceEEEEEEEEEEEeccCCcEeEEEEECCcccCCEEEEEcCCEEEEEEEeCCCCCeeEecCCCCCCCCCCCCCCcccccC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEEEcccCcceeEeeccccccccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHhcC
Q 008592 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTG 194 (560)
Q Consensus 115 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~ 194 (560)
+|+||++|+|+|++++++||||||||.+.+++||+|+|||+++.+.+++++..++|++|+|+||+++...+++......+
T Consensus 81 pI~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 160 (539)
T TIGR03389 81 PIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG 160 (539)
T ss_pred CcCCCCeEEEEEEecCCCeeEEEecCchhhhccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHhcC
Confidence 99999999999998669999999999998889999999999987766777677899999999999998888776666556
Q ss_pred CCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC---------
Q 008592 195 GAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--------- 265 (560)
Q Consensus 195 ~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p--------- 265 (560)
..+.++|+++||||.+++++|+....+.++|++||+|||||||+|....+.|+|+||+|+|||+||.+++|
T Consensus 161 ~~~~~~d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~P~~~~~l~i~ 240 (539)
T TIGR03389 161 GAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240 (539)
T ss_pred CCCCccceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCcccCceEeCeEEec
Confidence 55667899999999988889988778899999999999999999999999999999999999999999998
Q ss_pred -----------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccc
Q 008592 266 -----------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIR 334 (560)
Q Consensus 266 -----------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~ 334 (560)
++.+++|||++....++...+.+....|+|+|.+..... .+.. + ..+...++.....+...++
T Consensus 241 ~GqRydVlv~a~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~---~p~~-~--~~~~~~~~~~~~~~~~~l~ 314 (539)
T TIGR03389 241 PGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSA---KPIL-P--TLPAYNDTAAATNFSNKLR 314 (539)
T ss_pred CCCEEEEEEECCCCCceEEEEEeccccCccCCCCcceEEEEEECCCCCCC---CCCC-C--CCCCCCchhhhhHHHhhcc
Confidence 355689999987654443234456689999999864321 1111 2 2222222211111222333
Q ss_pred ccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCcccCCCCCC
Q 008592 335 SLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPAN 414 (560)
Q Consensus 335 ~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~ 414 (560)
.+..+.++..+|..+++++.+.+.+......+ ..+...++.++.|++|+++|..|+.++|.+.+.+++ |.+..+++..
T Consensus 315 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~-~~~~~~~~~~ 392 (539)
T TIGR03389 315 SLNSAQYPANVPVTIDRRLFFTIGLGLDPCPN-NTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGIS-GVFTTDFPAN 392 (539)
T ss_pred cccccCCCCCCCCCCCeEEEEEeecccccCcc-cccccCCCcEEEEEECCcccCCCCcchhhhhhcccC-CccccCCccC
Confidence 33333334445555677766666543221100 001122355788999999999898888887766544 5555667777
Q ss_pred CCccccCCCCC-CCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCC
Q 008592 415 PPFKFNYTGTP-PSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVD 493 (560)
Q Consensus 415 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~ 493 (560)
+|..|++++.. +.+...+.++.++.++.|++||++|+|........||||||||+||||++|.|.|+.......+|+.|
T Consensus 393 ~p~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~~~nl~n 472 (539)
T TIGR03389 393 PPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVD 472 (539)
T ss_pred CCccccCCCCCcccccccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCccccccCC
Confidence 88888766542 11112344678899999999999999965323459999999999999999999998765555789999
Q ss_pred CCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCCCCCCCCCCCCC
Q 008592 494 PAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560 (560)
Q Consensus 494 p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c 560 (560)
|++|||+.|+++||++|||++||||+|+|||||+||+..||+++|.+.++.+..++++++|+.+|+|
T Consensus 473 P~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~p~~~~~c 539 (539)
T TIGR03389 473 PPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539 (539)
T ss_pred CCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccCCCCccCCCC
Confidence 9999999999999999999999999999999999999999999999988888888999999999999
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-101 Score=820.41 Aligned_cols=503 Identities=26% Similarity=0.458 Sum_probs=401.3
Q ss_pred hhhccCceEEEEEEEEEEEeeecC--ceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCC
Q 008592 30 LAKHEGITRHYKFHIKMQNITRLC--QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADG 107 (560)
Q Consensus 30 ~~~~~~~~~~~~l~~~~~~~~~~g--~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG 107 (560)
.+++++.+|+|+|+|++..+++|| ..+.+++|||++|||+|++++||+|+|+|+|+|+++|+|||||++|..++|+||
T Consensus 20 ~~~~~~~~~~y~~~v~~~~~~pdg~~~~~~vi~vNGq~PGPtI~~~~GD~v~V~V~N~L~~~ttIHWHGl~q~~t~w~DG 99 (596)
T PLN00044 20 PAGAGDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVTTNWNLVVNVRNALDEPLLLTWHGVQQRKSAWQDG 99 (596)
T ss_pred ccccCCceEEEEEEEEEEEEccCCCceeeEEEEEcCcCCCCcEEEECCCEEEEEEEeCCCCCccEEECCccCCCCccccC
Confidence 445667899999999999999999 456899999999999999999999999999999999999999999999999999
Q ss_pred CCCcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCC-cceeEEeeeccccChHH
Q 008592 108 PAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPF-EEVPIIFGEWWKADTET 185 (560)
Q Consensus 108 v~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~-~e~~l~~~d~~~~~~~~ 185 (560)
+++ |||||+||++|+|+|++++|+||||||+|...|+ +||+|+|||++++..++++...+ +|.+|+|+||++++..+
T Consensus 100 v~~-TQcPI~PG~sftY~F~~~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~~~~~P~~~~~~~e~~i~l~DW~~~~~~~ 178 (596)
T PLN00044 100 VGG-TNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRA 178 (596)
T ss_pred CCC-CcCCcCCCCcEEEEEEeCCCCceeEeeccchhhhhCcCeeEEEEcCcccccccccCCcccceEEEecccccCCHHH
Confidence 988 9999999999999999977999999999999998 89999999999876666654433 79999999999988766
Q ss_pred HHHHHHhcCCCCCCCceEEEcCcCCCCCCCC----CCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCC
Q 008592 186 IINEAMQTGGAPNISDAFTINGLPGPFYNCA----AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAV 261 (560)
Q Consensus 186 ~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~----~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 261 (560)
+ ......+..+..+|.++|||+....++|. +...++++|++||+|||||||++....+.|+|+||+|+|||+||.
T Consensus 179 ~-~~~l~~g~~~~~~d~~lING~g~~~~n~~~~~~~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~mtVIa~DG~ 257 (596)
T PLN00044 179 L-RRALDAGDLLGAPDGVLINAFGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGS 257 (596)
T ss_pred H-HHHHhcCCCCCCCCceEEcccCccccCCccccCCCccceEEECCCCEEEEEEEEccCCceEEEEECCCEEEEEEeCCc
Confidence 4 33444555556789999999965445664 345568999999999999999999999999999999999999999
Q ss_pred ccCC--------------------CCCCc-eEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCC-
Q 008592 262 YAKS--------------------KAPNA-NFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPK- 319 (560)
Q Consensus 262 ~v~p--------------------~~~~~-~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~- 319 (560)
+++| +|.++ +|||++..+......+++..+.|||+|.+.... ...+ . | ..+.
T Consensus 258 ~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~a~~~~~~~~~~~~~~~~AIl~Y~~~~~~--~~~~-~-P--~~p~~ 331 (596)
T PLN00044 258 YTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGP--ASGP-L-P--DAPDD 331 (596)
T ss_pred ccCceeeeeEEEcCCceEEEEEECCCCCCCceEEEEecccccCccccCcceeEEEEECCCCCC--CCCC-C-C--CCCcc
Confidence 9999 45544 899998653222222456678899999886421 1111 2 4 3343
Q ss_pred CCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCC-cCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHh
Q 008592 320 FNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGL-SPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAH 398 (560)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~ 398 (560)
+.++....++...++.+..++.+...|...+....++++... ..+.....| . .++.|++|+++|..|++++|.++
T Consensus 332 ~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~-g~~~~s~Nnvsf~~p~~p~L~a~ 407 (596)
T PLN00044 332 QYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELI---D-GKLRATLNEISYIAPSTPLMLAQ 407 (596)
T ss_pred cCCchhhhhhhHhhhhccCCCcCCCCCcccceeeEEeeeeeeeecccccccc---C-CeEEEEECcccCCCCCCcchhhh
Confidence 455543333434454433333333344434443333333211 000000111 1 36889999999999999999887
Q ss_pred hccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCC
Q 008592 399 FFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFG 478 (560)
Q Consensus 399 ~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g 478 (560)
+.+.+ |.+..+|++.+|... ....+.++.++.|++|||+|+|.. ...||||||||+|+||++|.|
T Consensus 408 ~~~~~-gv~~~~fp~~pp~~~-----------~~~~t~v~~~~~n~~VeiV~qn~~---~~~HP~HLHGh~F~Vvg~G~G 472 (596)
T PLN00044 408 IFNVP-GVFKLDFPNHPMNRL-----------PKLDTSIINGTYKGFMEIIFQNNA---TNVQSYHLDGYAFFVVGMDYG 472 (596)
T ss_pred hccCC-CcccCCCCCCCCccc-----------cccCceEEEcCCCCEEEEEEeCCC---CCCCCeeEcCccEEEEeecCC
Confidence 77665 888888888777420 123577899999999999999953 369999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCC-CCCCCCCCCCC
Q 008592 479 NFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGP-KQKLPPPPSDL 557 (560)
Q Consensus 479 ~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~-~~~~~~~p~~~ 557 (560)
.|++. +.+.+|+.||++||||.|+++||++|||++||||+|+|||||+.|...||.+.|.|+++.+. .+++++||.++
T Consensus 473 ~~~~~-~~~~~Nl~nPp~RdTv~vp~~gW~aIRF~aDNPG~W~lHCH~~~h~~~Gm~~~~~v~~~~~~~~~~~~~pP~~~ 551 (596)
T PLN00044 473 LWTDN-SRGTYNKWDGVARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPIPDNA 551 (596)
T ss_pred CCCCC-cccccccCCCCccceEEeCCCCeEEEEEecCCCEEehhhccCchhhcccCcEEEEEecCCCCccccccCCCccc
Confidence 99965 45689999999999999999999999999999999999999999999999999999999876 88999999999
Q ss_pred CCC
Q 008592 558 PKC 560 (560)
Q Consensus 558 ~~c 560 (560)
+.|
T Consensus 552 ~~C 554 (596)
T PLN00044 552 IFC 554 (596)
T ss_pred Ccc
Confidence 999
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-98 Score=800.72 Aligned_cols=505 Identities=24% Similarity=0.448 Sum_probs=385.0
Q ss_pred HHHHHHHHHHhhhhhhhhccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEe
Q 008592 15 TFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHW 94 (560)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~ 94 (560)
+|++++|+++....... +.+.+++|+|+|++..+++||+++.+++|||++|||+|++++||+|+|+|+|+|+++|+|||
T Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~~~~y~~~v~~~~~~pdG~~r~~~~iNGq~PGP~I~~~~GD~v~V~v~N~l~~~ttiHW 84 (552)
T PLN02354 6 LLAVLLCLAAAVALVVR-AEDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNNLDEPFLLTW 84 (552)
T ss_pred HHHHHHHHHHHHHHhhh-ccccEEEEEEEEEEEEecCCCeEEEEEEECCCCcCCcEEEeCCCEEEEEEEECCCCCccccc
Confidence 44445554442222222 24578999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeE
Q 008592 95 HGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPI 173 (560)
Q Consensus 95 HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l 173 (560)
||++|.+++|+||+++ |||||+||++|+|+|++.+|+||||||+|...|+ +||+|+|||++++..+.+++..++|++|
T Consensus 85 HGi~q~~~~~~DGv~~-TQcpI~PG~sf~Y~F~~~~q~GT~WYHsH~~~Q~~~Gl~G~lII~~~~~~~~p~~~~d~e~~l 163 (552)
T PLN02354 85 SGIQQRKNSWQDGVPG-TNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTV 163 (552)
T ss_pred ccccCCCCcccCCCcC-CcCCCCCCCcEEEEEEeCCCCcceEEecCccceecCCccceEEEcCCcCCCCCCCCcCceEEE
Confidence 9999999999999999 9999999999999999867899999999999998 8999999999987666666666789999
Q ss_pred EeeeccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeE
Q 008592 174 IFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTL 253 (560)
Q Consensus 174 ~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~ 253 (560)
+|+||+++...++.. ....+..+..+|++||||+....+. ...+.++|++||+|||||||+|....+.|+|+||+|
T Consensus 164 ~l~Dw~~~~~~~~~~-~~~~g~~~~~~d~~liNG~~~~~~~---~~~~~~~v~~Gk~yRlRiINa~~~~~~~f~IdgH~~ 239 (552)
T PLN02354 164 LIGDWYTKSHTALKK-FLDSGRTLGRPDGVLINGKSGKGDG---KDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKM 239 (552)
T ss_pred EeeeeccCCHHHHHH-HHhcCCCCCCCCeEEEeCCcCCCCC---CCceEEEECCCCEEEEEEEecCCCceEEEEECCceE
Confidence 999999998766543 3444444456899999999653321 235789999999999999999999999999999999
Q ss_pred EEEEeCCCccCC--------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCC
Q 008592 254 TIVETDAVYAKS--------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKP 313 (560)
Q Consensus 254 ~via~DG~~v~p--------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p 313 (560)
+|||+||++++| +|.+++|||++...... .+....|+|+|++..... .+.. |
T Consensus 240 tVIa~DG~~v~p~~~~~l~i~~GqRydVlv~a~~~~g~Y~i~a~~~~~~----~~~~~~ail~Y~g~~~~~---~~~~-p 311 (552)
T PLN02354 240 KLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQAPKDYYMVASTRFLK----KVLTTTGIIRYEGGKGPA---SPEL-P 311 (552)
T ss_pred EEEEeCCcccCCcceeEEEEccCceEEEEEECCCCCCcEEEEEeccccC----CCccEEEEEEECCCCCCC---CCCC-C
Confidence 999999999988 34567888887643221 245678999998864221 1111 2
Q ss_pred CCCCCC-CC-CchhhhhhcccccccccCCCCCCC----CCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceec
Q 008592 314 AAILPK-FN-DTNFVMQFSKKIRSLATAKFPAKV----PMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSF 387 (560)
Q Consensus 314 ~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~p~~~----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~ 387 (560)
..+. .. .......+...+.+....+.+... ....++.+.+...... + + ..+.|++|+++|
T Consensus 312 --~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~-g~~~~~iNn~s~ 377 (552)
T PLN02354 312 --EAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNSASK--------V---D-GKLRYALNGVSH 377 (552)
T ss_pred --CCCcccccchhhhhhhhhcccccccCCCCCCccccccccccceEEEeccccc--------C---C-ceEEEEECCccC
Confidence 1111 00 000000111111111111111000 0112233333221110 1 2 256799999999
Q ss_pred cCCchhhhHHhhccCCCCcccCC-CCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeec
Q 008592 388 VQPNVALLQAHFFNRSKGVYTTD-FPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLH 466 (560)
Q Consensus 388 ~~p~~~~l~~~~~~~~~g~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlH 466 (560)
..|+.|.|.+.+.++..|.+..+ ++..+|..++. ...++.++.++.|++|||+|+|.. ...||||||
T Consensus 378 ~~p~~P~L~~~~~~~~~g~~~~~~~~~~pp~~~~~---------~~~~~~v~~~~~~~~VeiVi~n~~---~~~HP~HLH 445 (552)
T PLN02354 378 VDPETPLKLAEYFGVADKVFKYDTIKDNPPAKITK---------IKIQPNVLNITFRTFVEIIFENHE---KSMQSWHLD 445 (552)
T ss_pred CCCCCChHHhhhhcccCCccccCccccCCccccCc---------cccCCeeEEcCCCCEEEEEEeCCC---CCCCCCcCC
Confidence 99999998887654443554433 33444432110 223567889999999999999964 469999999
Q ss_pred CcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCC
Q 008592 467 GFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGP 546 (560)
Q Consensus 467 G~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~ 546 (560)
||+||||++|.|.|++. ....+|+.||++|||+.|+++||++|||++||||+|+|||||..|+..||.+.|.|.++.+.
T Consensus 446 Gh~F~Vlg~G~G~~~~~-~~~~~nl~nP~rRDTv~vp~~Gw~vIRF~aDNPGvW~~HCHi~~H~~~g~~l~~~v~~~~~~ 524 (552)
T PLN02354 446 GYSFFAVAVEPGTWTPE-KRKNYNLLDAVSRHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERS 524 (552)
T ss_pred CccEEEEeecCCCCCcc-ccccCCcCCCCccceEEeCCCCeEEEEEEecCCeEEeeeccccccccccceEEEEEeCCccc
Confidence 99999999999999865 35678999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCCCCCCCCCCCC
Q 008592 547 KQKLPPPPSDLPKC 560 (560)
Q Consensus 547 ~~~~~~~p~~~~~c 560 (560)
.+++.++|++.+.|
T Consensus 525 ~~~~~~~P~~~~~C 538 (552)
T PLN02354 525 LRDEYNMPENALLC 538 (552)
T ss_pred cCcCCCCCcccccc
Confidence 88888899999999
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-98 Score=798.52 Aligned_cols=489 Identities=26% Similarity=0.448 Sum_probs=384.8
Q ss_pred hhccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC
Q 008592 31 AKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY 110 (560)
Q Consensus 31 ~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 110 (560)
.++++. ++|+|+|++..+++||+++.+++|||++|||+|++++||+|+|+|+|+|+++++|||||++|.+++|+||+++
T Consensus 11 ~~~~~~-~~~~~~vt~~~~~pdg~~~~~~~vNGq~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~q~~~~~~DGv~~ 89 (536)
T PLN02792 11 VKADDT-LFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLSWNGVHMRKNSYQDGVYG 89 (536)
T ss_pred hhcCCe-EEEEEEEEEEEeCCCCeEEEEEEECCCCCCCcEEEECCCEEEEEEEeCCCCCcCEeCCCcccCCCCccCCCCC
Confidence 444444 5899999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHH
Q 008592 111 VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINE 189 (560)
Q Consensus 111 ~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 189 (560)
|||||+||++|+|+|++++|+||||||+|...|+ +||+|+|||+++++.+.+++..++|++|+|+||++++...+..
T Consensus 90 -tqcPI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~liI~~~~~~~~p~~~~d~e~~i~l~Dw~~~~~~~~~~- 167 (536)
T PLN02792 90 -TTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKK- 167 (536)
T ss_pred -CcCccCCCCcEEEEEEeCCCccceEEecCcchhhhcccccceEEeCCcccCcCCCcccceeEEEecccccCCHHHHHH-
Confidence 9999999999999999877899999999999988 8999999999866555666667889999999999988766433
Q ss_pred HHhcCCC-CCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC---
Q 008592 190 AMQTGGA-PNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--- 265 (560)
Q Consensus 190 ~~~~~~~-~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p--- 265 (560)
....+.. +..+|++||||+... ..++++|++||+|||||||+|..+.+.|+|+||+|+|||+||++++|
T Consensus 168 ~~~~g~~~~~~~d~~liNG~~~~-------~~~~~~v~~Gk~yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~~v~p~~~ 240 (536)
T PLN02792 168 ILDGGRKLPLMPDGVMINGQGVS-------YVYSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMY 240 (536)
T ss_pred HhhccCcCCCCCCEEEEeccCCC-------CcceEEECCCCEEEEEEEEcCCCceEEEEECCcEEEEEEeCCccCCCcce
Confidence 3334432 337899999999643 23689999999999999999999999999999999999999999988
Q ss_pred -----------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 008592 266 -----------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQ 328 (560)
Q Consensus 266 -----------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 328 (560)
+|++++|||++..+..+ ....+.|+|+|.+..... +.. | ..|.+++......
T Consensus 241 ~~l~i~~GqRydVlV~a~~~~g~Y~i~a~~~~~~----~~~~~~ail~Y~g~~~~~----~~~-p--~~p~~~~~~~~~~ 309 (536)
T PLN02792 241 TSLDIHVGQTYSVLVTMDQPPQNYSIVVSTRFIA----AKVLVSSTLHYSNSKGHK----IIH-A--RQPDPDDLEWSIK 309 (536)
T ss_pred eEEEEccCceEEEEEEcCCCCceEEEEEEeccCC----CCCceEEEEEECCCCCCC----CCC-C--CCCCcCCcccccc
Confidence 45567899988754322 234678999999864221 111 2 2333333322222
Q ss_pred hcccccccccCCCCCCCCCCcceeEEEEeccCC-cCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCcc
Q 008592 329 FSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGL-SPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVY 407 (560)
Q Consensus 329 ~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~ 407 (560)
+...++.+..++.+..+|...++...++++... ..+. ... .+.++.|++|+++|..|++++|.+++.++. |.+
T Consensus 310 ~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~iN~~s~~~p~~p~L~a~~~~~~-g~~ 383 (536)
T PLN02792 310 QAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESS-AAL----VKRKQRYAINGVSFVPSDTPLKLADHFKIK-GVF 383 (536)
T ss_pred chhhhhhccCCCCCCCCCCcccccceeccceeEEeccc-ccc----cCceeEEEECCcccCCCCCchhhhhhhccC-CCc
Confidence 212222222222233444332222112211110 0000 000 113578999999999999999988777655 666
Q ss_pred cCC-CCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCC
Q 008592 408 TTD-FPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDP 486 (560)
Q Consensus 408 ~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~ 486 (560)
..+ ++..+|..++ ...++.++.++.|++|||+|+|.. ...||||||||+||||++|.|.|++. +.
T Consensus 384 ~~~~~~~~p~~~~~----------~~~~~~v~~~~~~~~VeiViqn~~---~~~HP~HLHGh~F~Vvg~G~G~~~~~-~~ 449 (536)
T PLN02792 384 KVGSIPDKPRRGGG----------MRLDTSVMGAHHNAFLEIIFQNRE---KIVQSYHLDGYNFWVVGINKGIWSRA-SR 449 (536)
T ss_pred CcccCccCCcccCC----------CccCceEEEcCCCCEEEEEEECCC---CCCCCeeeCCCceEEEeecCCCCCcc-cc
Confidence 543 6666664221 123577899999999999999954 35899999999999999999999874 45
Q ss_pred CCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCCCCCCCCCCCCC
Q 008592 487 AKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560 (560)
Q Consensus 487 ~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c 560 (560)
..+|+.||++||||.|+++||++|||++||||+|+||||+.+|+..||..+|.|+++.+..+++++||++++.|
T Consensus 450 ~~~Nl~nP~~RdTv~v~~~gw~aIRf~aDNPGvW~~HCh~~~h~~~Gm~~~~~v~~~~~~~~~~~~pP~~~~~C 523 (536)
T PLN02792 450 REYNLKDAISRSTTQVYPESWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLC 523 (536)
T ss_pred cccCcCCCCccceEEECCCCEEEEEEEeeCCEEEeeeEcchhccccceEEEEEEccCCCccccccCCCcccCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-98 Score=797.52 Aligned_cols=499 Identities=25% Similarity=0.456 Sum_probs=379.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcC
Q 008592 10 AILRATFLGFFALWILSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYN 89 (560)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~ 89 (560)
.....++++.++.+ +..+...+.+.+|+|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|+|+++
T Consensus 4 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~y~~~v~~~~~~~dg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~L~~~ 81 (539)
T PLN02835 4 AVNLHLLLGVLAVL--SSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQP 81 (539)
T ss_pred HHHHHHHHHHHHHH--HHHhhhhccCcEEEEEEEEEEEEeccCCeEEEEEEECCcCCCCCEEEECCCEEEEEEEeCCCCC
Confidence 33445555554433 2333333456899999999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCC
Q 008592 90 VTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPF 168 (560)
Q Consensus 90 ~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~ 168 (560)
|+|||||++|.+++|+||+++ |||||+||++|+|+|++++|+||||||+|...|+ +||+|+|||+++...+++++.++
T Consensus 82 ttiHWHGl~~~~~~~~DGv~~-tQ~pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d 160 (539)
T PLN02835 82 FLLTWNGIKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPD 160 (539)
T ss_pred CcEEeCCcccCCCCCCCCCcc-CcCCCCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCCCCCC
Confidence 999999999999999999999 9999999999999999867899999999999998 89999999987655555666678
Q ss_pred cceeEEeeeccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEE
Q 008592 169 EEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSI 248 (560)
Q Consensus 169 ~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i 248 (560)
+|++|+++||++++..++... ...+.....+|.+||||+.. +.++|++||+|||||||+|..+.+.|+|
T Consensus 161 ~e~~l~l~Dw~~~~~~~~~~~-~~~g~~~~~~d~~liNG~~~----------~~~~v~~G~~yRlRliNa~~~~~~~f~i 229 (539)
T PLN02835 161 GDFTLLVGDWYKTSHKTLQQR-LDSGKVLPFPDGVLINGQTQ----------STFSGDQGKTYMFRISNVGLSTSLNFRI 229 (539)
T ss_pred ceEEEEeeccccCCHHHHHHH-hhcCCCCCCCceEEEccccC----------ceEEECCCCEEEEEEEEcCCCccEEEEE
Confidence 999999999999987765433 33454556789999999963 4789999999999999999999999999
Q ss_pred cCCeEEEEEeCCCccCC--------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCC
Q 008592 249 ANHTLTIVETDAVYAKS--------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNL 308 (560)
Q Consensus 249 ~gh~~~via~DG~~v~p--------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~ 308 (560)
+||+|+|||+||++++| ++.+++|||++...... ......|+|+|++.......+
T Consensus 230 ~gH~~~VI~~DG~~v~p~~~~~l~i~~GqRydvlv~~~~~~g~y~i~a~~~~~~----~~~~~~ail~Y~~~~~~~~~~- 304 (539)
T PLN02835 230 QGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTR----QILTATAVLHYSNSRTPASGP- 304 (539)
T ss_pred CCCEEEEEEECCccCCCceeeEEEECcCceEEEEEEcCCCCCcEEEEEEccccC----CCcceEEEEEECCCCCCCCCC-
Confidence 99999999999999988 34557888887542221 234678999998853211111
Q ss_pred CCCCCCCCCCCCC---CchhhhhhcccccccccCCCCCC---C-CCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeee
Q 008592 309 PLLKPAAILPKFN---DTNFVMQFSKKIRSLATAKFPAK---V-PMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAAS 381 (560)
Q Consensus 309 ~~~~p~~~~~~~~---~~~~~~~~~~~l~~~~~~~~p~~---~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (560)
. | ..+... +......+...+.+....+.+.. . ....++++.+...... .+| +..|+
T Consensus 305 --~-p--~~p~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~g-~~~w~ 367 (539)
T PLN02835 305 --L-P--ALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPL-----------ING-KQRYA 367 (539)
T ss_pred --C-C--CCCccccccccchhhccccccCccccCCCCCccccccccCCCceEEEeccccc-----------cCC-eEEEE
Confidence 1 2 111110 00000000001111111111100 0 0112333333221110 022 46799
Q ss_pred ecceeccCCchhhhHHhhccCCCCcccCCC-CCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCC
Q 008592 382 VNNVSFVQPNVALLQAHFFNRSKGVYTTDF-PANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAES 460 (560)
Q Consensus 382 in~~~~~~p~~~~l~~~~~~~~~g~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~ 460 (560)
+|+++|..|+.++|.+.+.... |.+.... ...++ +...+.++.++.++.|++|||+|+|.. ...
T Consensus 368 iN~~s~~~p~~P~L~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~t~~~~~~~~~~Veivi~N~~---~~~ 432 (539)
T PLN02835 368 VNGVSYVNSDTPLKLADYFGIP-GVFSVNSIQSLPS-----------GGPAFVATSVMQTSLHDFLEVVFQNNE---KTM 432 (539)
T ss_pred ECCcccCCCCCChhhhhhhcCC-CccccCccccCCC-----------CCccccCCeEEEcCCCCEEEEEEECCC---CCC
Confidence 9999999888888776665432 4443221 11111 111234578899999999999999964 469
Q ss_pred CceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEE
Q 008592 461 HPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIV 540 (560)
Q Consensus 461 HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V 540 (560)
||||||||+||||++|.|.|+.. ....+|+.||++||||.|+++||++|||++||||+|+|||||++|+..||+.+|.|
T Consensus 433 HP~HLHGh~F~Vlg~G~g~~~~~-~~~~~nl~nP~~RDTv~vp~~gw~~IrF~aDNPG~Wl~HCHi~~H~~~Gm~~~~~V 511 (539)
T PLN02835 433 QSWHLDGYDFWVVGYGSGQWTPA-KRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQYLGQQFYLRV 511 (539)
T ss_pred CCCCCCCccEEEEeccCCCCCcc-cccccCCCCCCccceEEeCCCCEEEEEEECcCCEEeeeeecchhhhhcccEEEEEE
Confidence 99999999999999999988764 34567899999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCC
Q 008592 541 NDGKGPKQKLPPPPSDLPKC 560 (560)
Q Consensus 541 ~~~~~~~~~~~~~p~~~~~c 560 (560)
+++.+..++++++|.++|+|
T Consensus 512 ~~~~~~~~~~~~~P~~~~~C 531 (539)
T PLN02835 512 WNQVHSLANEYDIPDNALLC 531 (539)
T ss_pred ccCCCccccccCCCcccccc
Confidence 99999999999999999999
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-98 Score=794.70 Aligned_cols=474 Identities=28% Similarity=0.502 Sum_probs=377.7
Q ss_pred cCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCc
Q 008592 34 EGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQ 113 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq 113 (560)
++.+++|+|+|++..+++||+++.+++|||++|||+|++++||+|+|+|+|+|+++|+|||||++|.+++|+||+++ ||
T Consensus 25 ~~~~~~~~~~vt~~~~~pdG~~r~~~~vNG~~PGP~I~~~~GD~v~V~V~N~L~~~ttiHWHGi~q~~~~~~DGv~~-tQ 103 (543)
T PLN02991 25 EDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNHLDEPFLISWSGIRNWRNSYQDGVYG-TT 103 (543)
T ss_pred cCceEEEEEEEEEEEeCCCCEEEEEEEEcCCCCCCcEEEECCCEEEEEecCCCCCCccEEECCcccCCCccccCCCC-CC
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred cccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHh
Q 008592 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQ 192 (560)
Q Consensus 114 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 192 (560)
|||+||++|+|+|++++|+||||||+|.+.|+ +||+|+|||++++.++.++..+++|++|+|+||+++....+... ..
T Consensus 104 cpI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~d~~i~l~DW~~~~~~~~~~~-~~ 182 (543)
T PLN02991 104 CPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQ-LD 182 (543)
T ss_pred CccCCCCcEEEEEEeCCCCcceEEecCcchhhhCCCeeeEEEeCCcccCcccccccceeEEEecceecCCHHHHHHH-hh
Confidence 99999999999999867899999999999888 79999999999876666666678899999999999987665433 33
Q ss_pred cCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC-------
Q 008592 193 TGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS------- 265 (560)
Q Consensus 193 ~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p------- 265 (560)
.+..+..+|++|||||.. .++++|++||+|||||||+|..+.+.|+|+||+|+|||+||++++|
T Consensus 183 ~~~~~~~~d~~liNG~~~---------~~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~~~~p~~~~~l~ 253 (543)
T PLN02991 183 NGGKLPLPDGILINGRGS---------GATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLD 253 (543)
T ss_pred cCCCCCCCCEEEEccCCC---------CceEEECCCCEEEEEEEeccCCeeEEEEECCCEEEEEEeCCccccceeeeEEE
Confidence 444456789999999953 3579999999999999999999999999999999999999999988
Q ss_pred -------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchh--hhhhc
Q 008592 266 -------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNF--VMQFS 330 (560)
Q Consensus 266 -------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~~~~ 330 (560)
+|+.++|||++..+... ......|||+|++.......+ . | ..+....... .....
T Consensus 254 i~~GQRydvlv~a~~~~~~y~i~~~~~~~~----~~~~~~AIl~Y~g~~~~~~~~---~-p--~~p~~~~~~~~~~~~~~ 323 (543)
T PLN02991 254 VHVGQSYSVLITADQPAKDYYIVVSSRFTS----KILITTGVLHYSNSAGPVSGP---I-P--DGPIQLSWSFDQARAIK 323 (543)
T ss_pred EcCCcEEEEEEECCCCCCcEEEEEeeccCC----CCcceEEEEEeCCCCCCCCCC---C-C--CCCccccccccchhhhh
Confidence 45678899998754321 234578999999864211111 1 2 1111000000 00111
Q ss_pred ccccccccCCCCCCCCCC--------cceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccC
Q 008592 331 KKIRSLATAKFPAKVPMK--------VDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNR 402 (560)
Q Consensus 331 ~~l~~~~~~~~p~~~p~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~ 402 (560)
..+.+ ..+...|.. .++.+.+...... + + .++.|++|+++|..|++++|.+++...
T Consensus 324 ~~l~p----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------~---~-g~~~~~iN~~s~~~p~~p~L~~~~~~~ 387 (543)
T PLN02991 324 TNLTA----SGPRPNPQGSYHYGKINITRTIRLANSAGN--------I---E-GKQRYAVNSASFYPADTPLKLADYFKI 387 (543)
T ss_pred hcccC----CCCCCCCCccccccccccceeEEEeecccc--------c---C-ceEEEEECCCccCCCCCChhhhhhhcc
Confidence 12221 112222222 1222222211110 1 2 256899999999999889988877755
Q ss_pred CCCcccCC-CCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCC
Q 008592 403 SKGVYTTD-FPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFD 481 (560)
Q Consensus 403 ~~g~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~ 481 (560)
+ |.+..+ +++.+|.. .....+.++.++.|++|||+|+|.. ...||||||||+||||++|.|.|+
T Consensus 388 ~-g~~~~~~~~~~~~~~-----------~~~~~~~v~~~~~~~~VeiViqn~~---~~~HP~HLHGh~F~Vvg~G~G~f~ 452 (543)
T PLN02991 388 A-GVYNPGSIPDQPTNG-----------AIFPVTSVMQTDYKAFVEIVFENWE---DIVQTWHLDGYSFYVVGMELGKWS 452 (543)
T ss_pred c-CccccccccccCCCC-----------ccccCCcEEEcCCCCEEEEEEeCCC---CCCCCeeeCCcceEEEEeCCCCCC
Confidence 4 666544 44443321 0123466789999999999999964 369999999999999999999998
Q ss_pred CCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCCCCCCCCCCCCC
Q 008592 482 PNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560 (560)
Q Consensus 482 ~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c 560 (560)
+. +...+|+.||++|||+.|+++||++|||++||||+|+|||||..|+..||..++.|+++.+..+++++||.++|+|
T Consensus 453 ~~-~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~W~~HCHi~~h~~~gm~~~~~v~~~~~~~~~~~~~P~~~~~C 530 (543)
T PLN02991 453 AA-SRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLC 530 (543)
T ss_pred cc-cccccCCCCCCcccEEEECCCCEEEEEEECCCCEEeeeeeCccccccccEEEEEEecCCCCccccccCCCcccCcc
Confidence 76 4567999999999999999999999999999999999999999999999999999999999999999999999999
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-97 Score=786.17 Aligned_cols=479 Identities=28% Similarity=0.474 Sum_probs=367.5
Q ss_pred cCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCc
Q 008592 34 EGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQ 113 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq 113 (560)
.+++|+|+|+|++..+++||+++.+++|||++|||+|++++||+|+|+|+|+|+++|+|||||++|.+++|+||+++ ||
T Consensus 23 ~a~~~~~~~~vt~~~~~pdG~~~~~~~vNG~~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~~~~~~~~DGv~g-tQ 101 (545)
T PLN02168 23 FAPIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNNLTEPFLMTWNGLQLRKNSWQDGVRG-TN 101 (545)
T ss_pred cccEEEEEEEEEEEEecCCCeEEEEEEECCcCCCCcEEEECCCEEEEEEEeCCCCCccEeeCCccCCCCCCcCCCCC-Cc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHh
Q 008592 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQ 192 (560)
Q Consensus 114 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 192 (560)
|||+||++|+|+|++++|+||||||||.+.|+ +||+|+|||+++++.+.+++..++|++|+|+||++.+...+.. ...
T Consensus 102 cpI~PG~sftY~F~~~~q~GT~WYHsH~~~Q~~~GL~G~lII~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~-~~~ 180 (545)
T PLN02168 102 CPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRA-SLD 180 (545)
T ss_pred CCCCCCCcEEEEEEeCCCCceEEEecChhhhhhCcceeEEEEcCCcccCcCcCcccceeeEEEEecCCCCHHHHHh-hhh
Confidence 99999999999999866899999999999988 8999999999987766666667889999999999987655433 223
Q ss_pred cCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC-------
Q 008592 193 TGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS------- 265 (560)
Q Consensus 193 ~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p------- 265 (560)
.+.....+|.+||||+.. ..++++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 181 ~g~~~~~~d~~liNG~~~--------~~~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~~tVIa~DG~~v~p~~~~~l~ 252 (545)
T PLN02168 181 NGHSLPNPDGILFNGRGP--------EETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSLD 252 (545)
T ss_pred cCCCCCCCCEEEEeccCC--------CcceEEeCCCCEEEEEEEeccCCceEEEEECCcEEEEEEECCeECCCceeeEEE
Confidence 333345789999999963 23589999999999999999999999999999999999999999998
Q ss_pred -------------CCCC-c---eEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 008592 266 -------------KAPN-A---NFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQ 328 (560)
Q Consensus 266 -------------~~~~-~---~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 328 (560)
++.. | +|||++.....+ ....+.|+|+|++...... .+ . | ..+...+.....+
T Consensus 253 i~~GqRydvlv~a~~~~~g~~~~Y~i~a~~~~~~----~~~~~~ail~Y~~~~~~~~--~p-~-p--~~p~~~~~~~~~~ 322 (545)
T PLN02168 253 IHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTD----AYLGGVALIRYPNSPLDPV--GP-L-P--LAPALHDYFSSVE 322 (545)
T ss_pred EcCCceEEEEEEcCCCCCCCcceEEEEEEecccC----CCcceEEEEEECCCCCCCC--CC-C-C--CCCcccccccccc
Confidence 2222 3 799988753322 1356789999987643211 11 1 2 2233332211111
Q ss_pred hcccccccccCCCCCCCCCC--------cceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhc
Q 008592 329 FSKKIRSLATAKFPAKVPMK--------VDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFF 400 (560)
Q Consensus 329 ~~~~l~~~~~~~~p~~~p~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~ 400 (560)
....++....+..+...|.. .+..+.+.... . .+ + ..+.|++|+++|..|++|++.+++.
T Consensus 323 ~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~------~~---~-g~~~~~iN~~s~~~p~~P~l~~~~~ 390 (545)
T PLN02168 323 QALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDV--M------LS---S-GKLRYTINGVSFVYPGTPLKLVDHF 390 (545)
T ss_pred hhhhhhhcCCCCCCCCCCcccccccccccceeEEecccc--c------cc---C-ceEEEEECCCccCCCCCchhhhhhc
Confidence 11111111111111122211 12222211100 0 00 2 2567999999999999888876655
Q ss_pred cCCCCcccC-CCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCC
Q 008592 401 NRSKGVYTT-DFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGN 479 (560)
Q Consensus 401 ~~~~g~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~ 479 (560)
+++ +.+.. +++..+|.. ....++.++.++.|++|||+|+|.. ...||||||||+||||++|.|.
T Consensus 391 ~~~-~~~~~~~~~~~p~~~-----------~~~~~~~v~~~~~~~~VeiViqn~~---~~~HP~HLHGh~F~Vvg~g~g~ 455 (545)
T PLN02168 391 QLN-DTIIPGMFPVYPSNK-----------TPTLGTSVVDIHYKDFYHIVFQNPL---FSLESYHIDGYNFFVVGYGFGA 455 (545)
T ss_pred ccc-cccccCCCccCCCcC-----------ccccCceEEEecCCCEEEEEEeCCC---CCCCCeeeCCCceEEEECCCCC
Confidence 433 22222 244433310 0112467889999999999999964 4699999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCC------CCCCCCCC
Q 008592 480 FDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKG------PKQKLPPP 553 (560)
Q Consensus 480 ~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~------~~~~~~~~ 553 (560)
|++.. ...+|+.||++|||+.|+++||++|||++||||+|+|||||.+|...||.+.++|+++.+ ..++++++
T Consensus 456 ~~~~~-~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~Wl~HCHi~~~~h~g~gl~~~v~~~~~e~p~~~~~~~~~~~ 534 (545)
T PLN02168 456 WSESK-KAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPI 534 (545)
T ss_pred CCccc-cccCCCCCCCccceEEeCCCCEEEEEEEccCCeEEeeeecCcccceecCcEEEEEEcccccCccccccccccCC
Confidence 98653 457899999999999999999999999999999999999999988898888888864433 25678899
Q ss_pred CCCCCCC
Q 008592 554 PSDLPKC 560 (560)
Q Consensus 554 p~~~~~c 560 (560)
|+++++|
T Consensus 535 P~~~~~c 541 (545)
T PLN02168 535 PGNVIRC 541 (545)
T ss_pred Chhhccc
Confidence 9999999
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-96 Score=776.02 Aligned_cols=510 Identities=48% Similarity=0.878 Sum_probs=443.4
Q ss_pred hhhccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC
Q 008592 30 LAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA 109 (560)
Q Consensus 30 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~ 109 (560)
..++++.++.|+|+++...++++|.+++++++||++|||+|++++||+|.|+|.|+++++++|||||++|..++|+|| +
T Consensus 21 ~~~a~~~~~~~~~~v~~~~~s~l~~~~~vi~iNG~fPGP~I~~~~gD~ivV~v~N~~~~~~sihWhGv~q~kn~w~DG-~ 99 (563)
T KOG1263|consen 21 FSQAEAPIRFHTWKVTYGTASPLCVEKQVITINGQFPGPTINAEEGDTIVVNVVNRLDEPFSIHWHGVRQRKNPWQDG-V 99 (563)
T ss_pred HhhhcCceEEEEeeEEeeeeccCCccceeEeecCCCCCCeEEEEeCCEEEEEEEeCCCCceEEEeccccccCCccccC-C
Confidence 445578999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeecccc-ChHHHH
Q 008592 110 YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKA-DTETII 187 (560)
Q Consensus 110 ~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~-~~~~~~ 187 (560)
++|||||+||++|+|+|++++|.||||||+|...|+ +|++|+|||+++...++|++..++|++|+++||+.+ ....+.
T Consensus 100 ~~TqCPI~Pg~~~tY~F~v~~q~GT~~yh~h~~~~Ra~G~~G~liI~~~~~~p~pf~~pd~E~~ill~dW~~~~~~~~l~ 179 (563)
T KOG1263|consen 100 YITQCPIQPGENFTYRFTVKDQIGTLWYHSHVSWQRATGVFGALIINPRPGLPVPFPKPDKEFTILLGDWYKNLNHKNLK 179 (563)
T ss_pred ccccCCcCCCCeEEEEEEeCCcceeEEEeeccccccccCceeEEEEcCCccCCCCCCCCCceeEEEeEeeccccCHHHHH
Confidence 999999999999999999988999999999999999 799999999999888888888999999999999996 777766
Q ss_pred HHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC--
Q 008592 188 NEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS-- 265 (560)
Q Consensus 188 ~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p-- 265 (560)
......+..+..+|..+|||+.+..++| .++++|++||+|||||+|+|....+.|+|++|+|+||++||.+++|
T Consensus 180 ~~~~~~~~~p~~~D~~~iNg~~g~~~~~----~~~l~v~pGktY~lRiiN~g~~~~l~F~I~~H~ltvVe~Dg~y~~p~~ 255 (563)
T KOG1263|consen 180 NFLDRTGALPNPSDGVLINGRSGFLYNC----TPTLTVEPGKTYRLRIINAGLNTSLNFSIANHQLTVVEVDGAYTKPFT 255 (563)
T ss_pred HhhccCCCCCCCCCceEECCCCCcccCc----eeEEEEcCCCEEEEEEEccccccceEEEECCeEEEEEEecceEEeeee
Confidence 6655566656568999999999988999 6899999999999999999999999999999999999999999999
Q ss_pred ------------------CCCCceEEEEeccCCCCC-CcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhh
Q 008592 266 ------------------KAPNANFLIAARPYATGP-ASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFV 326 (560)
Q Consensus 266 ------------------~~~~~~y~i~~~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 326 (560)
+|.+++|+|++.++.+.. ..+ +....++++|.+.........+.. + .++...+...+
T Consensus 256 ~~~l~i~~GQ~~~vLvtadq~~~~Y~i~~~~~~~~~~~~~-~~t~~~~l~y~~~~~~~s~~~~~~-~--~~~~~~~~~~s 331 (563)
T KOG1263|consen 256 TDSLDIHPGQTYSVLLTADQSPGDYYIAASPYFDASNVPF-NLTTTGILRYSGSTHPASEKLPIY-P--FLPPGNDTAWS 331 (563)
T ss_pred eceEEEcCCcEEEEEEeCCCCCCcEEEEEEeeeccCCcce-eeeEEEEEEEeCCcccCcccCccc-c--cCCcccCchhh
Confidence 567779999999877643 233 677899999998422211111211 2 34555566666
Q ss_pred hhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchh-hhHHhhccCCCC
Q 008592 327 MQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVA-LLQAHFFNRSKG 405 (560)
Q Consensus 327 ~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~-~l~~~~~~~~~g 405 (560)
..+...++.+.....+..+|...++...++++.+...++.+. .++.+..+++|+.+|..|+++ ++..++..+. |
T Consensus 332 ~~~~~~~r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~siN~isf~~P~tp~~l~~~~~~~~-~ 406 (563)
T KOG1263|consen 332 TYQARSIRSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDN----KNNGKLRASINNISFVTPKTPSLLAAYFKNIP-G 406 (563)
T ss_pred hhhhhcccccccccCcccCCCccccccceeeeccEEeccCCC----CCCcEEEEEEcceEEECCCCchhhhhhhccCC-c
Confidence 667777787777777888898888888888877766654211 245677899999999999984 5666666555 7
Q ss_pred cccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCC
Q 008592 406 VYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKD 485 (560)
Q Consensus 406 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~ 485 (560)
.+..+++..|+..+++++ .+.++.++.++.+++||++++|.+......||||||||.|||++.|.|.|++..+
T Consensus 407 ~~~~d~p~~P~~~~~~~~-------~~~~t~v~~~~~~~~veIVlqN~~~~~~~~hp~HLHG~~F~Vvg~g~G~~~~~~d 479 (563)
T KOG1263|consen 407 YFTNDFPDKPPIKFDYTG-------PTLGTSVMKLEFNSFVEIVLQNTSTGTQENHPNHLHGYNFYVVGYGFGNWDPAKD 479 (563)
T ss_pred cccCccCCCCccccCCcc-------ccccceEEEeecCCEEEEEEeCCccccCCCCccceeceEEEEEEecccccCcCcC
Confidence 778889999988888765 3568999999999999999999987677889999999999999999999999545
Q ss_pred C-CCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCCCCCCCCCCCCC
Q 008592 486 P-AKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560 (560)
Q Consensus 486 ~-~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c 560 (560)
. ..+|+.+|+.||||.|+||||++|||.|||||+|+||||+.+|...||.+.|.|.++.+..+++.+||.+.++|
T Consensus 480 ~~~~yNl~dp~~R~Tv~V~pggw~aIrf~adNPG~W~~HCHie~H~~~G~~~~f~V~~~~~~~~~~~~~P~~~~~c 555 (563)
T KOG1263|consen 480 PRKKYNLVDPVSRDTVQVPPGGWTAIRFVADNPGVWLMHCHIEDHLYLGMETVFIVGNGEESLSSEYPPPKNLPKC 555 (563)
T ss_pred hhhhcccCCCcccceEEeCCCCEEEEEEEcCCCcEEEEEEecHHHHhccCeEEEEEeCCCccCCcCCCCCCCcccc
Confidence 5 78999999999999999999999999999999999999999999999999999999999999999999999999
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-91 Score=750.43 Aligned_cols=492 Identities=30% Similarity=0.555 Sum_probs=357.3
Q ss_pred CceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCCcCc
Q 008592 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAYVTQ 113 (560)
Q Consensus 35 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 113 (560)
+++|+|+|++++..+++||+++.+++|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+++|+||++++||
T Consensus 21 ~~~~~~~~~vt~~~~~pdG~~~~v~~vNg~~pGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~gvtq 100 (574)
T PLN02191 21 AAVREYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAGVTQ 100 (574)
T ss_pred cceEEEEEEEEEEEeccCCceeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCCcccc
Confidence 57899999999999999999999999999999999999999999999999997 78999999999999999999999999
Q ss_pred cccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHh
Q 008592 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQ 192 (560)
Q Consensus 114 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 192 (560)
|+|+||++|+|+|++ .++||||||||...|+ +||+|+|||+++.+...++ .+|+|++|+|+||++............
T Consensus 101 ~pI~PG~s~~Y~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 178 (574)
T PLN02191 101 CAINPGETFTYKFTV-EKPGTHFYHGHYGMQRSAGLYGSLIVDVAKGPKERL-RYDGEFNLLLSDWWHESIPSQELGLSS 178 (574)
T ss_pred CCcCCCCeEEEEEEC-CCCeEEEEeeCcHHHHhCCCEEEEEEccCCCCCCCC-CCCeeEEEeeeccccCChHHHHHhhcc
Confidence 999999999999998 7899999999999988 8999999999754432222 358899999999999875543222211
Q ss_pred c-CCCCCCCceEEEcCcCCCCCCCCC--------------------CceeeEEEccCCEEEEEEEecCCCCeEEEEEcCC
Q 008592 193 T-GGAPNISDAFTINGLPGPFYNCAA--------------------KDTFKLKVTPGKTYLLRMINAALNDELFFSIANH 251 (560)
Q Consensus 193 ~-~~~~~~~d~~lvNG~~~~~~~~~~--------------------~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh 251 (560)
. ......++++||||+.. +.|.. ....+++|++||+|||||||+|+.+.+.|+||||
T Consensus 179 ~~~~~~~~~d~~liNG~g~--~~~~~~~~~~~~~~~~~~~~~~n~~~~p~~~~v~~G~~yRlRiINa~~~~~~~~~idgH 256 (574)
T PLN02191 179 KPMRWIGEAQSILINGRGQ--FNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALASLNLAVQGH 256 (574)
T ss_pred CCCCcCCCCCceEECCCCC--CCCcccccccCCcccccceeccCCCCCceEEEEcCCCEEEEEEEecCCceeEEEEECCC
Confidence 1 11224578999999863 34421 1223699999999999999999999999999999
Q ss_pred eEEEEEeCCCccCC--------------------CCCC-ceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCC
Q 008592 252 TLTIVETDAVYAKS--------------------KAPN-ANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPL 310 (560)
Q Consensus 252 ~~~via~DG~~v~p--------------------~~~~-~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~ 310 (560)
+|+|||+||++++| +|.+ ++|||++.....+ .......|+|+|.+....... ...
T Consensus 257 ~~tVIa~DG~~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira~~~~~~---~~~~~~~ail~Y~~~~~~~~p-~~~ 332 (574)
T PLN02191 257 KLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRK---PNTTQALTILNYVTAPASKLP-SSP 332 (574)
T ss_pred eEEEEEcCCeeccceEeeeEEEcCCCeEEEEEECCCCCCCCEEEEEEccccC---CCCCCceEEEEECCCCCCCCC-CCC
Confidence 99999999999998 4444 5899998754322 122235699999876432100 000
Q ss_pred CCCCCCCCCCCCchhhhhhcccccccccCCCCCCCCC-CcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccC
Q 008592 311 LKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPM-KVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQ 389 (560)
Q Consensus 311 ~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~ 389 (560)
. | ..+.+.+......+ ....+.....+ ..|. ..+..+.+... .. ......|++|+.+|..
T Consensus 333 ~-~--~~p~~~~~~~~~~~--~~~~~~~~~~~-~~p~~~~~~~~~~~~~--~~-----------~~~~~~~~~n~~s~~~ 393 (574)
T PLN02191 333 P-P--VTPRWDDFERSKNF--SKKIFSAMGSP-SPPKKYRKRLILLNTQ--NL-----------IDGYTKWAINNVSLVT 393 (574)
T ss_pred C-C--CCCcccccchhhcc--cccccccccCC-CCCCcccceEEEeccc--ce-----------eCCeEEEEECcccCcC
Confidence 0 1 12222222111111 11111110001 1121 12343333211 10 1123469999999998
Q ss_pred CchhhhHHhhccCCCCcccCCCCCCC-CccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcC---ccCCCceee
Q 008592 390 PNVALLQAHFFNRSKGVYTTDFPANP-PFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSII---VAESHPLHL 465 (560)
Q Consensus 390 p~~~~l~~~~~~~~~g~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~---~~~~HP~Hl 465 (560)
|+.+.|.+.+.+.. +.+..+.+... +..|+..+... ....+.++.++.++.|++|||+|+|.... ....|||||
T Consensus 394 p~~P~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HL 471 (574)
T PLN02191 394 PATPYLGSVKYNLK-LGFNRKSPPRSYRMDYDIMNPPP-FPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHL 471 (574)
T ss_pred CCcchHHHHhhccC-cccccCCCcccccccccccCCCc-cccccccceeEEecCCCEEEEEEECCCcccCCCCCCCCEEe
Confidence 88888777655432 33322222111 11121111100 00123456789999999999999996411 257899999
Q ss_pred cCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCC
Q 008592 466 HGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 466 HG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
|||+||||++|.|.|++......+|+.||++|||+.|+++||++|||++||||+|+|||||+||+..||+++|.. .. +
T Consensus 472 HGh~F~Vlg~G~g~~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRf~aDNPG~Wl~HCHi~~Hl~~Gm~~~~~e-~~-~ 549 (574)
T PLN02191 472 HGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAE-GL-N 549 (574)
T ss_pred CCCCeEEEEecCCCCCcccCcccccCCCCCcCCeEEeCCCCEEEEEEECCCCEEEEEecCchhhhhcCCEEEEec-Ch-h
Confidence 999999999999999875444578999999999999999999999999999999999999999999999999953 22 2
Q ss_pred CCCCCCCCCCCCCCC
Q 008592 546 PKQKLPPPPSDLPKC 560 (560)
Q Consensus 546 ~~~~~~~~p~~~~~c 560 (560)
.++.+|..+++|
T Consensus 550 ---~~~~~p~~~~~C 561 (574)
T PLN02191 550 ---RIGKIPDEALGC 561 (574)
T ss_pred ---hccCCCcchhhh
Confidence 334467888999
|
|
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-91 Score=750.73 Aligned_cols=502 Identities=32% Similarity=0.571 Sum_probs=371.8
Q ss_pred hhhhhhhhccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCc
Q 008592 25 LSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSG 103 (560)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~ 103 (560)
++.++.+.+.+.+|+|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|++ +++++|||||+++.+++
T Consensus 12 ~~~~~~~~~~~~~~~y~~~vt~~~~~pdG~~r~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~~~~~~~ 91 (566)
T PLN02604 12 FSVLNFPAAEARIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLLTENVAIHWHGIRQIGTP 91 (566)
T ss_pred HHHHHhhhccCcEEEEEEEEEEEEECCCCceeeEEEECCccCCCcEEEECCCEEEEEEEeCCCCCCCCEEeCCCCCCCCc
Confidence 34555556678999999999999999999999999999999999999999999999999998 58999999999999999
Q ss_pred CCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccC
Q 008592 104 WADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKAD 182 (560)
Q Consensus 104 ~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~ 182 (560)
|+||+++++||+|+||++++|+|++ +++||||||||...|+ +||+|+|||+++.++..++ .+++|.+|+|+||+++.
T Consensus 92 ~~DG~~~~tq~~i~pg~s~~y~f~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~-~~d~d~~l~l~Dw~~~~ 169 (566)
T PLN02604 92 WFDGTEGVTQCPILPGETFTYEFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPF-SYDYDRSIILTDWYHKS 169 (566)
T ss_pred cccCCCccccCccCCCCeEEEEEEc-CCCEEEEEeeCcHHHHhCCCeEEEEEEecCCCCCcc-ccCcceEEEeeccccCC
Confidence 9999999999999999999999998 7999999999998888 8999999999886544444 35889999999999998
Q ss_pred hHHHHHHHHhc-CCCCCCCceEEEcCcCCCCCCCCC-----------------CceeeEEEccCCEEEEEEEecCCCCeE
Q 008592 183 TETIINEAMQT-GGAPNISDAFTINGLPGPFYNCAA-----------------KDTFKLKVTPGKTYLLRMINAALNDEL 244 (560)
Q Consensus 183 ~~~~~~~~~~~-~~~~~~~d~~lvNG~~~~~~~~~~-----------------~~~~~~~v~~g~~~rlRliN~~~~~~~ 244 (560)
..+........ ......+++.+|||+.. +.|.. ...+.+++++|++|||||||+|..+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~d~~liNG~G~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRlINa~~~~~~ 247 (566)
T PLN02604 170 TYEQALGLSSIPFDWVGEPQSLLIQGKGR--YNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKTYRLRISSLTALSAL 247 (566)
T ss_pred HHHHHHhhccCCCccCCCCCceEEcCCCC--CCCccccCccccccccccCCCCCCceEEEecCCCEEEEEEEeccccceE
Confidence 76654432211 11123579999999963 44431 134579999999999999999999999
Q ss_pred EEEEcCCeEEEEEeCCCccCC--------------------CCCC-ceEEEEeccCCCCCCcCCCcceEEEEEecCCCCC
Q 008592 245 FFSIANHTLTIVETDAVYAKS--------------------KAPN-ANFLIAARPYATGPASFDNTTTAGVLEYDQPNGI 303 (560)
Q Consensus 245 ~~~i~gh~~~via~DG~~v~p--------------------~~~~-~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~ 303 (560)
.|+||||+|+|||+||++++| ++.+ ++|||++.....+ .+...+.|+|+|++....
T Consensus 248 ~~sidgH~~~VIa~DG~~v~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~~~~~---~~~~~~~aIL~Y~~~~~~ 324 (566)
T PLN02604 248 SFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRN---NTTPPGLAIFNYYPNHPR 324 (566)
T ss_pred EEEECCCEEEEEEeCCEecccceeeeEEEccCCeEEEEEECCCCCCCCEEEEEecccCC---CCCcceeEEEEECCCCCC
Confidence 999999999999999999998 3444 4799987643222 123567899999965321
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeec
Q 008592 304 TTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVN 383 (560)
Q Consensus 304 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in 383 (560)
...+...| ..+.+++..........+..+.. .+...+...++++.+...... .+..+.|++|
T Consensus 325 --~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~------------~~~~~~w~in 386 (566)
T PLN02604 325 --RSPPTVPP--SGPLWNDVEPRLNQSLAIKARHG--YIHPPPLTSDRVIVLLNTQNE------------VNGYRRWSVN 386 (566)
T ss_pred --CCCCCCCC--CCCcccccchhhcchhccccccc--CcCCCCCCCCeEEEEeccccc------------cCCeEEEEEC
Confidence 10111101 11122221111110011111111 111123344555554322111 1124679999
Q ss_pred ceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCC---CC-CCCccccCCcEEEEecCCCEEEEEEeeCCcC---
Q 008592 384 NVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTG---TP-PSNIMVSSGTKVVVLPFNASVEVVMQDTSII--- 456 (560)
Q Consensus 384 ~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~---~~-~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~--- 456 (560)
+++|..|+.+.|...+.... +.+..+. ++..+.+.. .. ..+...+.+..++.++.|++||++|+|....
T Consensus 387 ~~~~~~p~~p~L~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~ 462 (566)
T PLN02604 387 NVSFNLPHTPYLIALKENLT-GAFDQTP---PPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNAN 462 (566)
T ss_pred cccCCCCCCchhHhhhhcCC-CcccCCC---CCcccccccccccCCccccccccCceEEEccCCCeEEEEEECCccccCC
Confidence 99999888888777665332 4332111 111111100 00 0011123456789999999999999996421
Q ss_pred ccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEE
Q 008592 457 VAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKM 536 (560)
Q Consensus 457 ~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~ 536 (560)
....||||||||+||||++|.|.|++..+...+|+.||++|||+.|+++||++|||++||||.|+|||||+||+..||++
T Consensus 463 ~~~~HP~HLHGH~F~Vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~gwvvIRF~aDNPG~WlfHCHI~~Hl~~GM~~ 542 (566)
T PLN02604 463 NSETHPWHLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGMGV 542 (566)
T ss_pred CCCCCCEEecCCceEEEEecCCCCCccccccccCCCCCCccceEEeCCCceEEEEEECCCCeEeeEeecchhHhhcCCEE
Confidence 24689999999999999999999987766668999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCCC
Q 008592 537 AWIVNDGKGPKQKLPPPPSDLPKC 560 (560)
Q Consensus 537 ~~~V~~~~~~~~~~~~~p~~~~~c 560 (560)
+|.+. .++++.+|..+++|
T Consensus 543 v~~e~-----~~~~~~~p~~~~~C 561 (566)
T PLN02604 543 VFEEG-----IERVGKLPSSIMGC 561 (566)
T ss_pred EEeeC-----hhhccCCCCCcCcc
Confidence 99653 23566788899999
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-90 Score=744.90 Aligned_cols=491 Identities=32% Similarity=0.587 Sum_probs=362.0
Q ss_pred eEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCCcCccc
Q 008592 37 TRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAYVTQCP 115 (560)
Q Consensus 37 ~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 115 (560)
+|+|+|+|++..+++||+++.+++|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++.+++|+||+++++||+
T Consensus 1 ~~~y~~~vt~~~~~pdG~~~~~~~~Ng~~pGP~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~vtq~~ 80 (541)
T TIGR03388 1 IRHYKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAGVTQCA 80 (541)
T ss_pred CEEEEEEEEEEEecCCCeEeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCccccCC
Confidence 489999999999999999999999999999999999999999999999995 8999999999999999999999999999
Q ss_pred cCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHhcC
Q 008592 116 IQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTG 194 (560)
Q Consensus 116 i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~ 194 (560)
|+||++|+|+|++ .++||||||||...|+ +||+|+|||+++.++..++ .+|+|++|+|+||+++...+.........
T Consensus 81 I~PG~s~~y~f~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 158 (541)
T TIGR03388 81 INPGETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPF-HYDGEFNLLLSDWWHKSIHEQEVGLSSKP 158 (541)
T ss_pred cCCCCEEEEEEEc-CCCEEEEEEecchHHhhccceEEEEEecCCCCCCCc-cccceEEEEeecccCCCHHHHHhhcccCC
Confidence 9999999999998 7899999999998888 8999999999886544444 35889999999999988765433322111
Q ss_pred -CCCCCCceEEEcCcCCCCCCCCCC-------------------ceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEE
Q 008592 195 -GAPNISDAFTINGLPGPFYNCAAK-------------------DTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLT 254 (560)
Q Consensus 195 -~~~~~~d~~lvNG~~~~~~~~~~~-------------------~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~ 254 (560)
.....+++++|||+.. +.|... ....++|++|++|||||||+|..+.+.|+||+|+|+
T Consensus 159 ~~~~~~~d~~liNG~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~ 236 (541)
T TIGR03388 159 MRWIGEPQSLLINGRGQ--FNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLT 236 (541)
T ss_pred CcCCCCCcceEECCCCC--CCCccccccCccccchhhccCCCCCCceEEEECCCCEEEEEEEcccccceEEEEECCCEEE
Confidence 1123568999999953 344211 224689999999999999999999999999999999
Q ss_pred EEEeCCCccCC--------------------CCCC-ceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCC
Q 008592 255 IVETDAVYAKS--------------------KAPN-ANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKP 313 (560)
Q Consensus 255 via~DG~~v~p--------------------~~~~-~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p 313 (560)
|||+||++++| ++.+ ++|||++...... .......|+|+|.+...... ++...|
T Consensus 237 VIa~DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~~~~~---~~~~~~~aiL~Y~~~~~~~~--p~~~~~ 311 (541)
T TIGR03388 237 VVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRK---PNTPPGLTVLNYYPNSPSRL--PPTPPP 311 (541)
T ss_pred EEEeCCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEecccCC---CCCccEEEEEEECCCCCCCC--CCCCCC
Confidence 99999999998 3333 4799988743321 22345789999987532210 001001
Q ss_pred CCCCCCCCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchh
Q 008592 314 AAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVA 393 (560)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~ 393 (560)
..+.+.+......+ .+..+.... ....|...++++.+...... ....+.|++|+.+|..|+.+
T Consensus 312 --~~p~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~n~~s~~~p~~p 374 (541)
T TIGR03388 312 --VTPAWDDFDRSKAF--SLAIKAAMG-SPKPPETSDRRIVLLNTQNK------------INGYTKWAINNVSLTLPHTP 374 (541)
T ss_pred --CCCCccccchhhcc--chhhhcccc-CCCCCCCCCcEEEEeccCcc------------cCceEEEEECcccCCCCCcc
Confidence 22333322111101 111111101 11223345666554322110 11245699999999988888
Q ss_pred hhHHhhccCCCCcccCCCC-CCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcC---ccCCCceeecCcc
Q 008592 394 LLQAHFFNRSKGVYTTDFP-ANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSII---VAESHPLHLHGFN 469 (560)
Q Consensus 394 ~l~~~~~~~~~g~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~---~~~~HP~HlHG~~ 469 (560)
.|...+.+.. +.+..+.+ ...+..|+..... .+...+.++.++.++.|++||++|+|...+ ....||||||||+
T Consensus 375 ~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~~~HP~HLHGh~ 452 (541)
T TIGR03388 375 YLGSLKYNLL-NAFDQKPPPENYPRDYDIFKPP-PNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHD 452 (541)
T ss_pred HHHHHhhcCC-ccccCCCCcccccccccccCCC-cccccccCceEEEecCCCeEEEEEECCccccCCCCCCCcEEecCCc
Confidence 8777654332 22221110 0111111111100 011234467789999999999999996421 2468999999999
Q ss_pred eEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCC
Q 008592 470 FFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQK 549 (560)
Q Consensus 470 F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~ 549 (560)
||||++|.|.|+...+...+|+.||++|||+.|+++||++|||++||||.|+|||||+||+..||+++|.+. .++
T Consensus 453 F~vlg~g~g~~~~~~~~~~~n~~nP~~RDTv~vp~~gwvvIRF~adNPG~W~~HCHi~~H~~~GM~~~~~e~-----~~~ 527 (541)
T TIGR03388 453 FWVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEG-----VEK 527 (541)
T ss_pred eEEEeeccCCCCcccCcccccCCCCCEeceEEeCCCceEEEEEECCCCeEeeeeccchhhhhcccEEEEecc-----ccc
Confidence 999999999998665556799999999999999999999999999999999999999999999999999653 235
Q ss_pred CCCCCCCCCCC
Q 008592 550 LPPPPSDLPKC 560 (560)
Q Consensus 550 ~~~~p~~~~~c 560 (560)
++.+|+.+++|
T Consensus 528 ~~~~P~~~~~C 538 (541)
T TIGR03388 528 VGKLPKEALGC 538 (541)
T ss_pred cCCCCccccCC
Confidence 66689999999
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-88 Score=726.35 Aligned_cols=472 Identities=28% Similarity=0.480 Sum_probs=350.4
Q ss_pred EEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCCcCcccc
Q 008592 38 RHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAYVTQCPI 116 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq~~i 116 (560)
-.|+|+|++..+++||+++.+++|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++..++|+||+|++|||||
T Consensus 9 ~~~~l~v~~~~~~~~g~~r~~~~~NG~~PGP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~vTQcpI 88 (538)
T TIGR03390 9 PDHILRVTSDNIKIACSSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQWPI 88 (538)
T ss_pred ccEEEEEEEeEeccCCeEEEEEEECCcCCCCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcccccCCC
Confidence 46999999999999999999999999999999999999999999999996 89999999999999999999999999999
Q ss_pred CCCCeEEEEEEEc-ccCcceeEeeccccccccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHhcC-
Q 008592 117 QTGQSYVYNFTVT-GQRGTLFWHAHISWLRATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTG- 194 (560)
Q Consensus 117 ~pG~~~~Y~~~~~-~~~Gt~wYH~H~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~- 194 (560)
+||++|+|+|+++ +++||||||||...|+.||+|+|||++++..++. +|+|++|+|+||+++...++........
T Consensus 89 ~PG~sf~Y~f~~~~~q~GT~WYHsH~~~Q~~~l~G~lIV~~~~~~~~~---~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~ 165 (538)
T TIGR03390 89 PPGHFFDYEIKPEPGDAGSYFYHSHVGFQAVTAFGPLIVEDCEPPPYK---YDDERILLVSDFFSATDEEIEQGLLSTPF 165 (538)
T ss_pred CCCCcEEEEEEecCCCCeeeEEecCCchhhhcceeEEEEccCCccCCC---ccCcEEEEEeCCCCCCHHHHHhhhhccCC
Confidence 9999999999974 5899999999999999889999999987654443 4889999999999998877654433222
Q ss_pred CCCCCCceEEEcCcCCCCCC---CC---CCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCe-EEEEEeCCCccCC--
Q 008592 195 GAPNISDAFTINGLPGPFYN---CA---AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHT-LTIVETDAVYAKS-- 265 (560)
Q Consensus 195 ~~~~~~d~~lvNG~~~~~~~---~~---~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~-~~via~DG~~v~p-- 265 (560)
.....+++++||||..+... ++ ....+.++|++||+|||||||+|..+.+.|+|++|+ |+|||+||++++|
T Consensus 166 ~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa~DG~~~~P~~ 245 (538)
T TIGR03390 166 TWSGETEAVLLNGKSGNKSFYAQINPSGSCMLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTKPAK 245 (538)
T ss_pred ccCCCCceEEECCccccccccccccCCCCCcceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEEeCCCCCCceE
Confidence 11245689999999654320 00 113578999999999999999999999999999999 9999999999999
Q ss_pred ------------------CCC-------CceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 008592 266 ------------------KAP-------NANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKF 320 (560)
Q Consensus 266 ------------------~~~-------~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~ 320 (560)
++. +++|||++...... +.....|+|+|.+.........+.. + .++..
T Consensus 246 v~~l~l~~GqRydVlv~~~~~~~~~~~~~~~Y~ir~~~~~~~----~~~~~~aiL~Y~~~~~~~~~~~p~~-~--~~~~~ 318 (538)
T TIGR03390 246 IDHLQLGGGQRYSVLFKAKTEDELCGGDKRQYFIQFETRDRP----KVYRGYAVLRYRSDKASKLPSVPET-P--PLPLP 318 (538)
T ss_pred eCeEEEccCCEEEEEEECCCccccccCCCCcEEEEEeecCCC----CcceEEEEEEeCCCCCCCCCCCCCC-C--CCCcc
Confidence 222 37899998643221 2345789999986532211100111 1 11110
Q ss_pred CCchhhhhhcccccccccCCCC-CCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccC--CchhhhHH
Q 008592 321 NDTNFVMQFSKKIRSLATAKFP-AKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQ--PNVALLQA 397 (560)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~p-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~--p~~~~l~~ 397 (560)
....... ...+.++.....+ ...+..+++++.+.+++.... ....+.|++|+++|.. ++.|+|..
T Consensus 319 ~~~~~~~--~~~l~pl~~~~~~~~~~~~~~d~~~~l~~~~~~~~----------~~g~~~~~~N~~s~~~~~~~~P~L~~ 386 (538)
T TIGR03390 319 NSTYDWL--EYELEPLSEENNQDFPTLDEVTRRVVIDAHQNVDP----------LNGRVAWLQNGLSWTESVRQTPYLVD 386 (538)
T ss_pred Ccchhhh--heeeEecCccccCCCCCCCcCceEEEEEccccccc----------cCCeEEEEECCcccCCCCCCCchHHH
Confidence 1100000 1123333211000 011334677776666543210 1235679999999985 67787776
Q ss_pred hhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcC-----ccCCCceeecCcceEE
Q 008592 398 HFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSII-----VAESHPLHLHGFNFFV 472 (560)
Q Consensus 398 ~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~-----~~~~HP~HlHG~~F~V 472 (560)
.+.+ +. +..++ |+.. . .......++.++.++.|++|||+|+|.... ....||||||||+|||
T Consensus 387 ~~~~---~~-----~~~~~--~~~~--~-~~~~~~~~~~~~~~~~~~~V~ivi~n~~~~~~~~~~~~~HP~HlHGh~F~v 453 (538)
T TIGR03390 387 IYEN---GL-----PATPN--YTAA--L-ANYGFDPETRAFPAKVGEVLEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYD 453 (538)
T ss_pred HhcC---CC-----CcCCC--cccc--c-ccCCcCcCceEEEcCCCCEEEEEEECCcccccCCCCCCCCCeeecCCcEEE
Confidence 5532 10 00010 1100 0 000012345678899999999999996421 2479999999999999
Q ss_pred EEeCCCCCCCCCCCCCCCCCCCCccceeEeC----------CCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 473 VAQGFGNFDPNKDPAKFNLVDPAERNTVGVP----------SGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 473 l~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp----------p~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
|++|.|.|++......+++.||++|||+.|+ +++|++|||++||||+|+|||||+||+..||+++|.|.+
T Consensus 454 lg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~~~~~~~~~~~~~~~ir~~~dNPG~W~~HCHi~~H~~~Gm~~~~~~~~ 533 (538)
T TIGR03390 454 IGGGDGEYNATANEAKLENYTPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFGD 533 (538)
T ss_pred EcccccccCCccChhhhccCCCCeecceeeccccccccccCCCceEEEEEEcCCCeeEEEeccchhhhhccceEEEEeCC
Confidence 9999999987654456788999999999996 789999999999999999999999999999999999866
Q ss_pred CC
Q 008592 543 GK 544 (560)
Q Consensus 543 ~~ 544 (560)
.+
T Consensus 534 ~~ 535 (538)
T TIGR03390 534 AE 535 (538)
T ss_pred hH
Confidence 43
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-74 Score=615.99 Aligned_cols=411 Identities=25% Similarity=0.419 Sum_probs=292.6
Q ss_pred EEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccC
Q 008592 38 RHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQ 117 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~ 117 (560)
++|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++++. +||+|++|||+|+
T Consensus 46 ~~~~L~v~~~~~~~~G~~~~~~~~Ng~~PGP~ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DGvP~vt~~~I~ 123 (587)
T TIGR01480 46 TEFDLTIGETMVNFTGRARPAITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGILLPFQ--MDGVPGVSFAGIA 123 (587)
T ss_pred ceEEEEEEEEEEecCCeEEEEEEECCccCCceEEEECCCEEEEEEEcCCCCCceEEcCCCcCCcc--ccCCCcccccccC
Confidence 79999999999999999999999999999999999999999999999999999999999998754 9999999999999
Q ss_pred CCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHh----
Q 008592 118 TGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQ---- 192 (560)
Q Consensus 118 pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~---- 192 (560)
||++|+|+|++ .++||||||||...|. .||+|+|||++++++++. +|+|++|+|+||++.+..+++..+..
T Consensus 124 PG~s~~Y~f~~-~~~GTyWYHsH~~~q~~~GL~G~lIV~~~~~~p~~---~D~E~vl~L~Dw~~~~p~~i~~~l~~~~~~ 199 (587)
T TIGR01480 124 PGETFTYRFPV-RQSGTYWYHSHSGFQEQAGLYGPLIIDPAEPDPVR---ADREHVVLLSDWTDLDPAALFRKLKVMAGH 199 (587)
T ss_pred CCCeEEEEEEC-CCCeeEEEecCchhHhhccceEEEEECCCccccCC---CCceEEEEeeecccCCHHHHHHhhhccccc
Confidence 99999999998 7899999999998887 899999999987554443 48999999999998776665433220
Q ss_pred -----------------cCCC----------------C------CCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEE
Q 008592 193 -----------------TGGA----------------P------NISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLL 233 (560)
Q Consensus 193 -----------------~~~~----------------~------~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rl 233 (560)
.|.. . .....+||||+..+ ..+++.+++|++|||
T Consensus 200 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~d~~dv~G~~~~~LiNG~~~~-------~~~~~~v~~G~rvRL 272 (587)
T TIGR01480 200 DNYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADVNGSTYTYLMNGTTPA-------GNWTGLFRPGEKVRL 272 (587)
T ss_pred ccccccchhhhhhhhccccccccccccccccccccCCcccccccCccceEEEcCccCC-------CCceEEECCCCEEEE
Confidence 0100 0 00124789998532 345789999999999
Q ss_pred EEEecCCCCeEEEEEcCCeEEEEEeCCCccCCCC-------CCceEEEEeccCCCCCC-----cCC-CcceEEEEEecCC
Q 008592 234 RMINAALNDELFFSIANHTLTIVETDAVYAKSKA-------PNANFLIAARPYATGPA-----SFD-NTTTAGVLEYDQP 300 (560)
Q Consensus 234 RliN~~~~~~~~~~i~gh~~~via~DG~~v~p~~-------~~~~y~i~~~~~~~~~~-----~~~-~~~~~ail~y~~~ 300 (560)
||||+|+.+.+.|+|+||+|+|||+||++++|.+ +.+||.+.+....+... ..+ .....++|.+...
T Consensus 273 R~INas~~~~f~l~I~gh~m~VIa~DG~~v~Pv~vd~l~I~pGeRyDVlV~~~~~g~~~i~a~~~~~~~~~~~~l~~~~~ 352 (587)
T TIGR01480 273 RFINGSAMTYFDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVEPTGDDAFTIFAQDSDRTGYARGTLAVRLG 352 (587)
T ss_pred EEEecCCCceEEEEECCCEEEEEEcCCcCcCceEeCeEEEcCcceeEEEEecCCCceEEEEEEecCCCceEEEEEecCCC
Confidence 9999999999999999999999999999998832 34567766653222100 111 2345677877654
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchh-h---------hhh--cc--c---------------c------------------
Q 008592 301 NGITTKNLPLLKPAAILPKFNDTNF-V---------MQF--SK--K---------------I------------------ 333 (560)
Q Consensus 301 ~~~~~~~~~~~~p~~~~~~~~~~~~-~---------~~~--~~--~---------------l------------------ 333 (560)
.. .+.+.++|. ......+... . ... .. + +
T Consensus 353 ~~---~~~p~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (587)
T TIGR01480 353 LT---APVPALDPR-PLLTMKDMGMGGMHHGMDHSKMSMGGMPGMDMSMRAQSNAPMDHSQMAMDASPKHPASEPLNPLV 428 (587)
T ss_pred CC---CCCCCCCCc-cccChhhcccccccccccccccccCcccccCccccccccccCccccccccccccCcccccCCccc
Confidence 21 111212110 0000000000 0 000 00 0 0
Q ss_pred --------cccccC-------------------CCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeeccee
Q 008592 334 --------RSLATA-------------------KFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVS 386 (560)
Q Consensus 334 --------~~~~~~-------------------~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~ 386 (560)
..+..+ ..+...+...++.+.+.+.- +-.++.|++|+..
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~p~r~~~~~L~g--------------~m~~~~wtiNG~~ 494 (587)
T TIGR01480 429 DMIVDMPMDRMDDPGIGLRDNGRRVLTYADLHSLFPPPDGRAPGREIELHLTG--------------NMERFAWSFDGEA 494 (587)
T ss_pred cccccCcccccCCCCcccccCCcceeehhhccccccccCcCCCCceEEEEEcC--------------CCceeEEEECCcc
Confidence 000000 00000000112212111110 1123456666543
Q ss_pred ccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeec
Q 008592 387 FVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLH 466 (560)
Q Consensus 387 ~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlH 466 (560)
|. ....+.++.|++|+|.+.|.+ .+.||||||
T Consensus 495 ~~---------------------------------------------~~~pl~v~~Gervri~l~N~t---~~~HpmHlH 526 (587)
T TIGR01480 495 FG---------------------------------------------LKTPLRFNYGERLRVVLVNDT---MMAHPIHLH 526 (587)
T ss_pred CC---------------------------------------------CCCceEecCCCEEEEEEECCC---CCCcceeEc
Confidence 21 112367999999999999976 489999999
Q ss_pred CcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 467 GFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 467 G~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
|+.|+++..+ |. .+.++||+.|+||+++.++|+++|||.|+||||++.|++.|||..|+|.
T Consensus 527 G~~f~v~~~~-G~-------------~~~~~dTv~V~Pg~t~~~~f~ad~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 527 GMWSELEDGQ-GE-------------FQVRKHTVDVPPGGKRSFRVTADALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred CceeeeecCC-Cc-------------ccccCCceeeCCCCEEEEEEECCCCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 9999998653 21 2457899999999999999999999999999999999999999999873
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-72 Score=596.54 Aligned_cols=420 Identities=18% Similarity=0.245 Sum_probs=271.4
Q ss_pred eEEEEEEEEEEEeeecCcee-EEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccc
Q 008592 37 TRHYKFHIKMQNITRLCQTK-SIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCP 115 (560)
Q Consensus 37 ~~~~~l~~~~~~~~~~g~~~-~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 115 (560)
...|+|++++...+.++..+ .+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++++. +||+| ||+
T Consensus 45 ~~~~~L~~~~~~~~~~~~~~t~~~~yNg~~PGPtIr~~~Gd~v~v~~~N~L~~~ttiHwHGl~~~~~--~DG~p---q~~ 119 (523)
T PRK10965 45 RGRIQLTIQAGQSSFAGKTATATWGYNGNLLGPAVRLQRGKAVTVDITNQLPEETTLHWHGLEVPGE--VDGGP---QGI 119 (523)
T ss_pred CccEEEEEEEEEEEecCCceeEEEEECCCCCCceEEEECCCEEEEEEEECCCCCccEEcccccCCCc--cCCCC---CCC
Confidence 34699999999999887554 5999999999999999999999999999999999999999999876 99986 899
Q ss_pred cCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCC--CCcceeEEeeeccccChHHHHH
Q 008592 116 IQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQ--PFEEVPIIFGEWWKADTETIIN 188 (560)
Q Consensus 116 i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 188 (560)
|.||++|+|+|++++++||||||+|.++ |. .||+|+|||+++++...+++. ..+|++|+|+||+++...++..
T Consensus 120 I~PG~s~~Y~f~~~q~aGT~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~~~~~~lp~~~~~~d~~lvlqD~~~~~~g~~~~ 199 (523)
T PRK10965 120 IAPGGKRTVTFTVDQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVDDIPVILQDKRFSADGQIDY 199 (523)
T ss_pred CCCCCEEEEEeccCCCCceEEEecCCCCCcHHHHhCcCeEEEEEcCccccccCCcccCCCceeeEEEEeeeeCCCCceec
Confidence 9999999999998656899999999864 33 799999999998765444443 3468999999999876654321
Q ss_pred HHH-hcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEE-cCCeEEEEEeCCCcc-CC
Q 008592 189 EAM-QTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSI-ANHTLTIVETDAVYA-KS 265 (560)
Q Consensus 189 ~~~-~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~p 265 (560)
... ........+|.++|||+.+| .+.++ +++|||||||+|+.+.+.|++ ++|+|+|||+||+++ +|
T Consensus 200 ~~~~~~~~~g~~gd~~lVNG~~~p----------~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~vIa~DG~~l~~P 268 (523)
T PRK10965 200 QLDVMTAAVGWFGDTLLTNGAIYP----------QHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLYVIASDGGLLAEP 268 (523)
T ss_pred cccccccccCccCCeEEECCcccc----------eeecC-CCEEEEEEEeccCCceEEEEEcCCceEEEEEeCCCcccCc
Confidence 111 01112346799999999754 45664 579999999999999999998 899999999999987 45
Q ss_pred CC-------CCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCC--CCCCCCCCchhhhhhccccccc
Q 008592 266 KA-------PNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPA--AILPKFNDTNFVMQFSKKIRSL 336 (560)
Q Consensus 266 ~~-------~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~l~~~ 336 (560)
.+ +.+||.+.+... ......++........... .....|. ..+... ...........+..+
T Consensus 269 ~~v~~l~lapGeR~dvlv~~~--------~~~~~~l~~~~~~~~g~~~-~~~~~~~~~~~~~~~-~~~~~~~~P~~l~~~ 338 (523)
T PRK10965 269 VKVSELPILMGERFEVLVDTS--------DGKAFDLVTLPVSQMGMAL-APFDKPLPVLRIQPL-LISASGTLPDSLASL 338 (523)
T ss_pred cEeCeEEECccceEEEEEEcC--------CCceEEEEEecccCccccc-ccCCCceeEEEEecc-CcCCCCcCChhhccC
Confidence 21 335666665421 1111111111100000000 0000000 000000 000000000111111
Q ss_pred ccCCCCCCCCCCcceeEEEEeccCCc--------CCCCCCcccC-C---------CC------------Ce---e--eee
Q 008592 337 ATAKFPAKVPMKVDRRFFFTVGLGLS--------PCPQNQTCQG-P---------NN------------TK---L--AAS 381 (560)
Q Consensus 337 ~~~~~p~~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~---------~~------------~~---~--~~~ 381 (560)
... +. ......+++.+.+..... ...+.....+ . .| .+ + .|+
T Consensus 339 ~~~--~~-~~~~~~r~~~l~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (523)
T PRK10965 339 PAL--PS-LEGLTVRRLQLSMDPRLDMMGMQMLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANK 415 (523)
T ss_pred CCC--Cc-ccccceeEEEEeeccccchhhhhhcccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 100 00 000112333332210000 0000000000 0 00 00 0 023
Q ss_pred ecceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCC
Q 008592 382 VNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESH 461 (560)
Q Consensus 382 in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~H 461 (560)
||+++|. .....+.++.|++++|.|.|.+. .+.|
T Consensus 416 ING~~~~--------------------------------------------~~~~~~~~~~G~~e~w~i~N~~~--~~~H 449 (523)
T PRK10965 416 INGKAFD--------------------------------------------MNKPMFAAKKGQYERWVISGVGD--MMLH 449 (523)
T ss_pred CCCeECC--------------------------------------------CCCcceecCCCCEEEEEEEeCCC--CCcc
Confidence 3333221 11233678999999999999752 3689
Q ss_pred ceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe----cCceeeEEEeechhhhhcccEEE
Q 008592 462 PLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA----DNPGVWFMHCHLEVHTSWGLKMA 537 (560)
Q Consensus 462 P~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a----dnpG~w~~HCHil~H~d~GMm~~ 537 (560)
||||||++||||+++.. ......+.|||||.|++ +.+.|++++ +++|.||||||||+|||.|||..
T Consensus 450 p~HlHg~~F~Vl~~~g~---------~~~~~~~~wkDTv~v~~-~~~~i~~~f~~~~~~~g~~~~HCHiL~Hed~GMM~~ 519 (523)
T PRK10965 450 PFHIHGTQFRILSENGK---------PPAAHRAGWKDTVRVEG-GRSEVLVKFDHDAPKEHAYMAHCHLLEHEDTGMMLG 519 (523)
T ss_pred CeEEeCcEEEEEEecCC---------CCCccccccccEEEECC-cEEEEEEEecCCCCCCCCEEEEeCchhhhccCccce
Confidence 99999999999999632 22234568999999988 666666555 56789999999999999999999
Q ss_pred EEEc
Q 008592 538 WIVN 541 (560)
Q Consensus 538 ~~V~ 541 (560)
|.|.
T Consensus 520 ~~V~ 523 (523)
T PRK10965 520 FTVS 523 (523)
T ss_pred eEeC
Confidence 9883
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-71 Score=581.27 Aligned_cols=394 Identities=16% Similarity=0.199 Sum_probs=269.1
Q ss_pred EEEEEEEEEEeeecC-ceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccC
Q 008592 39 HYKFHIKMQNITRLC-QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQ 117 (560)
Q Consensus 39 ~~~l~~~~~~~~~~g-~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~ 117 (560)
.++|++.......++ ..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++++. .+||++ ++|.
T Consensus 47 ~~~l~~~~~~~~~~~g~~~~v~~~ng~~pGPtir~~~Gd~v~v~v~N~L~~~ttiHwHGl~~~~~-~~~g~~----~~I~ 121 (471)
T PRK10883 47 PLFLTLQRAHWSFTGGTKASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTEPVSMTVSGLQVPGP-LMGGPA----RMMS 121 (471)
T ss_pred cEEEEEEEeEEEecCCceeeEEEECCcccCCeEEEECCCEEEEEEEeCCCCCCceeECCccCCCC-CCCCcc----ccCC
Confidence 378999999988885 5778999999999999999999999999999999999999999999876 477765 7899
Q ss_pred CCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCC--CCcceeEEeeeccccChHHHHHHH
Q 008592 118 TGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQ--PFEEVPIIFGEWWKADTETIINEA 190 (560)
Q Consensus 118 pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~~~ 190 (560)
||++|+|+|++.+++||||||+|.++ |. +||+|+|||+++.+.+.+++. ..+|++|+|+||+.+...+....
T Consensus 122 PG~~~~y~f~~~~~aGT~WYH~H~~~~t~~qv~~GL~G~lII~d~~~~~~~~p~~~~~~d~~l~l~D~~~~~~g~~~~~- 200 (471)
T PRK10883 122 PNADWAPVLPIRQNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYN- 200 (471)
T ss_pred CCCeEEEEEecCCCceeeEEccCCCCchhhhHhcCCeEEEEEeCCcccccCCcccCCCcceeEEeeeeeeccCCCcccc-
Confidence 99999999998667999999999887 33 799999999998765555443 34599999999988765442211
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEE-cCCeEEEEEeCCCcc-CCC--
Q 008592 191 MQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSI-ANHTLTIVETDAVYA-KSK-- 266 (560)
Q Consensus 191 ~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~p~-- 266 (560)
........+|.++|||+.+ +.++|++| +|||||||+|+.+.+.|+| ++|+|+|||+||+++ +|.
T Consensus 201 -~~~~~g~~gd~~lvNG~~~----------p~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~~vIa~DGg~~~~P~~~ 268 (471)
T PRK10883 201 -EPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNARRYQLQMSDGRPLHVIAGDQGFLPAPVSV 268 (471)
T ss_pred -ccccCCccCCeeEECCccC----------CeEEecCC-EEEEEEEEccCCceEEEEEcCCCeEEEEEeCCCcccCCcEe
Confidence 1111234679999999965 36889875 7999999999999999999 899999999998776 552
Q ss_pred -----CCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCC-CCCCCCCCCCCCCCchhhhhhcc-cccccccC
Q 008592 267 -----APNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNL-PLLKPAAILPKFNDTNFVMQFSK-KIRSLATA 339 (560)
Q Consensus 267 -----~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~-~l~~~~~~ 339 (560)
.+.+||.+.+... ... .+....+......... ....+. ... .. .....+.. ...+....
T Consensus 269 ~~l~l~pGeR~dvlVd~~--------~~~--~~~l~~~~~~~~~~~~~~~~~~~-~~~--~~-~~~~~~~~~~~~~~~~~ 334 (471)
T PRK10883 269 KQLSLAPGERREILVDMS--------NGD--EVSITAGEAAGIVDRLRGFFEPS-SIL--VS-TLVLTLRPTGLLPLVTD 334 (471)
T ss_pred CeEEECCCCeEEEEEECC--------CCc--eEEEECCCccccccccccccCCc-ccc--cc-ceeEEEEccccccCCCC
Confidence 2345666666531 111 1111111000000000 000000 000 00 00000000 00000000
Q ss_pred CCCC------CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCcccCCCCC
Q 008592 340 KFPA------KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPA 413 (560)
Q Consensus 340 ~~p~------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~ 413 (560)
..|. ..+....++..+.++. . .|.||+.+|...
T Consensus 335 ~~p~~l~~~~~~~~~~~~~~~~~l~~----------------~--~~~INg~~~~~~----------------------- 373 (471)
T PRK10883 335 NLPMRLLPDEIMEGSPIRSREISLGD----------------D--LPGINGALWDMN----------------------- 373 (471)
T ss_pred cCChhhcCCCCCCCCCcceEEEEecC----------------C--cCccCCcccCCC-----------------------
Confidence 0000 0001122222222210 0 145666554211
Q ss_pred CCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCC
Q 008592 414 NPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVD 493 (560)
Q Consensus 414 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~ 493 (560)
...+.++.|++++|.+.|. +.|||||||+.|||++++.. .....+
T Consensus 374 ---------------------~~~~~~~~g~~e~W~~~n~-----~~HP~HlHg~~FqVl~~~G~---------~~~~~~ 418 (471)
T PRK10883 374 ---------------------RIDVTAQQGTWERWTVRAD-----MPQAFHIEGVMFLIRNVNGA---------MPFPED 418 (471)
T ss_pred ---------------------cceeecCCCCEEEEEEECC-----CCcCEeECCccEEEEEecCC---------CCCccc
Confidence 1125678999999999873 58999999999999999532 111233
Q ss_pred CCccceeEeCCCCEEEEEEEecCce----eeEEEeechhhhhcccEEEEEEcC
Q 008592 494 PAERNTVGVPSGGWVAIRFLADNPG----VWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 494 p~~rDTv~vpp~g~v~irf~adnpG----~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
..|||||.|+ +.++|+++++++| .||||||||+|||.|||.+|+|.+
T Consensus 419 ~gwkDTV~v~--~~v~i~~~f~~~~~~~~~~m~HCHiLeHeD~GMM~~~~V~~ 469 (471)
T PRK10883 419 RGWKDTVWVD--GQVELLVYFGQPSWAHFPFLFYSQTLEMADRGSIGQLLVNP 469 (471)
T ss_pred cCcCcEEEcC--CeEEEEEEecCCCCCCCcEEeecccccccccCCccCeEEec
Confidence 4799999996 4699999999887 899999999999999999999965
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-57 Score=484.05 Aligned_cols=405 Identities=22% Similarity=0.333 Sum_probs=269.6
Q ss_pred EEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccC
Q 008592 38 RHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQ 117 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~ 117 (560)
+.+.+..........+.....|.|||++|||+|++++||+|+|+++|+|.+.|++||||+.+++. +||++..+|+++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gP~i~~~~Gd~v~l~~~N~l~~~t~vh~HG~~~p~~--~dG~~~~~~~~~~ 111 (451)
T COG2132 34 RTFLTAQRAQLAFAPGTGATVWGYNGALPGPTIRVKKGDTVTLDLTNRLLVDTSVHWHGLPVPGE--MDGVPPLTQIPPG 111 (451)
T ss_pred ceEEeecccceeeecCCCceeEEecccccCceEEEecCCEEEEEEEeCCCCCceEEEcCcccCcc--ccCCCcccccCCC
Confidence 44444444444446677888999999999999999999999999999998889999999988855 9999999999999
Q ss_pred CCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHhcCCC
Q 008592 118 TGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGA 196 (560)
Q Consensus 118 pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~ 196 (560)
||++++|.|+. .++||||||+|.++|. +||+|++||+++.+.+..+ |++..++..+|+.......... .....
T Consensus 112 ~~~~~~y~f~~-~~~gT~wyh~H~~~Q~~~Gl~G~~II~~~~~~~~~~---d~~~~i~~~~~~~~~~~~~~~~--~~~~~ 185 (451)
T COG2132 112 PGETPTYTFTQ-DVPGTYWYHPHTHGQVYDGLAGALIIEDENSEPLGV---DDEPVILQDDWLDEDGTDLYQE--GPAMG 185 (451)
T ss_pred CCCcEEEeecC-CCCcceEeccCCCchhhcccceeEEEeCCCCCCCCC---CceEEEEEeeeecCCCCccccC--Ccccc
Confidence 99999999998 6678999999999988 8999999999987665533 6667777777876665544332 12223
Q ss_pred CCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCCC-------CCC
Q 008592 197 PNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKSK-------APN 269 (560)
Q Consensus 197 ~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p~-------~~~ 269 (560)
...++..+|||+.. ++...++++|||||+|++..+.+.+++.+++|+||++||.++++. .+.
T Consensus 186 ~~~g~~~~vnG~~~-----------p~~~~~~g~~rlRl~n~~~~~~~~~~~~~~~~~Vi~~DG~~v~~~~~d~~~l~p~ 254 (451)
T COG2132 186 GFPGDTLLVNGAIL-----------PFKAVPGGVVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPG 254 (451)
T ss_pred CCCCCeEEECCCcc-----------ceeecCCCeEEEEEEecCCceEEEEEecCceEEEEEeCCcCcCceeeeeEEecCc
Confidence 34679999999754 345555677999999999888888999999999999999999881 133
Q ss_pred ceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCC----CCCCCCCCCCCCCCCCchhhhhhcccccccccCCCCCCC
Q 008592 270 ANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTK----NLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKV 345 (560)
Q Consensus 270 ~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 345 (560)
++|.+...... .+...+............ ......+ ..+..+.. .......... ..
T Consensus 255 er~~v~v~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---------~~~~~~d~~~-~~ 314 (451)
T COG2132 255 ERYEVLVDMND--------GGAVTLTALGEDMPDTLKGFRAPNPILTP--SYPVLNGR---------VGAPTGDMAD-HA 314 (451)
T ss_pred ceEEEEEEcCC--------CCeEEEEeccccCCceeeeeecccccccc--cccccccc---------ccCCCcchhh-cc
Confidence 56666554321 111112111110000000 0000000 00000000 0000000000 00
Q ss_pred CCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCCCC
Q 008592 346 PMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTP 425 (560)
Q Consensus 346 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 425 (560)
+..........-+...... ... ...-....|.+|+..|.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~---~~l-~~~~~~~~~~~n~~~~~------------------------------------- 353 (451)
T COG2132 315 PVGLLVTILVEPGPNRDTD---FHL-IGGIGGYVWAINGKAFD------------------------------------- 353 (451)
T ss_pred ccccchhhcCCCccccccc---chh-hcccccccccccCccCC-------------------------------------
Confidence 0000000000000000000 000 00000112333332210
Q ss_pred CCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCC
Q 008592 426 PSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSG 505 (560)
Q Consensus 426 ~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~ 505 (560)
.....+.++.|++++|++.|.+ .+.|||||||+.|+|++.+ .......+.||||+.+.++
T Consensus 354 -------~~~~~~~~~~G~~~~~~i~n~~---~~~HP~HlHg~~F~v~~~~----------~~~~~~~~~~kDTv~v~~~ 413 (451)
T COG2132 354 -------DNRVTLIAKAGTRERWVLTNDT---PMPHPFHLHGHFFQVLSGD----------APAPGAAPGWKDTVLVAPG 413 (451)
T ss_pred -------CCcCceeecCCCEEEEEEECCC---CCccCeEEcCceEEEEecC----------CCcccccCccceEEEeCCC
Confidence 0133478899999999999975 3899999999999999986 1223356789999999999
Q ss_pred CEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 506 GWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 506 g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
+.++|+|.+++||.|+||||+++|++.|||..+.|..
T Consensus 414 ~~~~v~~~a~~~g~~~~HCH~l~H~~~Gm~~~~~v~~ 450 (451)
T COG2132 414 ERLLVRFDADYPGPWMFHCHILEHEDNGMMGQFGVVP 450 (451)
T ss_pred eEEEEEEeCCCCCceEEeccchhHhhcCCeeEEEecC
Confidence 9999999999999999999999999999999998853
|
|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=340.06 Aligned_cols=215 Identities=18% Similarity=0.207 Sum_probs=177.6
Q ss_pred hccCceEEEEEEEEEEEee-ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNIT-RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADGP 108 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DGv 108 (560)
++...+++|+|++++..++ .+|..+.+|+|||++|||+|++++||+|+|+|+|+++ .++++||||.. ++||+
T Consensus 22 ~~~~~~~~~~l~a~~~~~~~~~G~~~~~~~~nG~~pGP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~-----~~dg~ 96 (311)
T TIGR02376 22 RSGPKVVEVTMTIEEKKMVIDDGVTYQAMTFDGSVPGPLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT-----GALGG 96 (311)
T ss_pred cCCCcEEEEEEEEEEEEEEeCCCeEEEEEEECCcccCceEEEECCCEEEEEEEeCCCCCCceeeeecCCC-----ccCCC
Confidence 4577889999999999988 5699999999999999999999999999999999985 58999999963 38998
Q ss_pred CCcCccccCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccCh
Q 008592 109 AYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADT 183 (560)
Q Consensus 109 ~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~ 183 (560)
++++| |.||++++|+|.+ +++||||||||.++ |. .||+|+|||++++..+ ..|+|++|+++||+++..
T Consensus 97 ~~~~~--I~PG~t~ty~F~~-~~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~~~~----~~d~e~~l~l~d~~~~~~ 169 (311)
T TIGR02376 97 AALTQ--VNPGETATLRFKA-TRPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREGLP----EYDKEYYIGESDLYTPKD 169 (311)
T ss_pred Cccee--ECCCCeEEEEEEc-CCCEEEEEEcCCCCchhHHhhcCcceEEEeeccCCCc----CcceeEEEeeeeEecccc
Confidence 88887 9999999999998 78999999999754 44 7999999999875322 458899999999998754
Q ss_pred HHHHHHHH-h-cCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCC
Q 008592 184 ETIINEAM-Q-TGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAV 261 (560)
Q Consensus 184 ~~~~~~~~-~-~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 261 (560)
........ . .......++.++|||+.+++ .+.+++++|+++||||||++..+.+.|+++++.+++|+.||.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-------~~~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~~~v~~DG~ 242 (311)
T TIGR02376 170 EGEGGAYEDDVAAMRTLTPTHVVFNGAVGAL-------TGDNALTAGVGERVLFVHSQPNRDSRPHLIGGHGDYVWVTGK 242 (311)
T ss_pred ccccccccchHHHHhcCCCCEEEECCccCCC-------CCCcccccCCcEEEEEEcCCCCCCCCCeEecCCceEEEECCc
Confidence 32110000 0 00012356899999996542 235689999999999999999899999999999999999999
Q ss_pred ccCC
Q 008592 262 YAKS 265 (560)
Q Consensus 262 ~v~p 265 (560)
++++
T Consensus 243 ~~~~ 246 (311)
T TIGR02376 243 FANP 246 (311)
T ss_pred ccCC
Confidence 9876
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=261.23 Aligned_cols=116 Identities=43% Similarity=0.781 Sum_probs=109.0
Q ss_pred EEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeE
Q 008592 43 HIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSY 122 (560)
Q Consensus 43 ~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~ 122 (560)
+|++..++++|..+++|+|||++|||+|++++||+|+|+|+|+++++++|||||+++.+.+|+||+++++||+|.||+++
T Consensus 1 ~v~~~~~~~~~~~~~~~~~ng~~pGPtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~pG~~~ 80 (117)
T PF07732_consen 1 NVTETTVSPDGGTRKVWTYNGQFPGPTIRVREGDTVRITVTNNLDEPTSIHWHGLHQPPSPWMDGVPGVTQCPIAPGESF 80 (117)
T ss_dssp -EEEEEEETTSTEEEEEEETTBSSEEEEEEETTEEEEEEEEEESSSGBSEEEETSBSTTGGGGSGGTTTSGSSBSTTEEE
T ss_pred CeeEEEEEeCCcEEEEEEECCCCCCCEEEEEcCCeeEEEEEeccccccccccceeeeeeeeecCCcccccceeEEeecce
Confidence 47889999999889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcccCcceeEeecccccc-ccceEeEEEeCCC
Q 008592 123 VYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQ 158 (560)
Q Consensus 123 ~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~ 158 (560)
+|+|++.+++||||||||.+++. +||+|+|||++++
T Consensus 81 ~Y~~~~~~~~Gt~wYH~H~~~~~~~GL~G~~iV~~~~ 117 (117)
T PF07732_consen 81 TYEFTANQQAGTYWYHSHVHGQQVMGLYGAIIVEPPE 117 (117)
T ss_dssp EEEEEESSCSEEEEEEECSTTHHHTTEEEEEEEE-TT
T ss_pred eeeEeeeccccceeEeeCCCchhcCcCEEEEEEcCCC
Confidence 99999965699999999999975 9999999999863
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-30 Score=227.26 Aligned_cols=107 Identities=41% Similarity=0.806 Sum_probs=95.0
Q ss_pred cCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEE
Q 008592 432 SSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIR 511 (560)
Q Consensus 432 ~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~ir 511 (560)
..+..++.++.|++|||+|+|.+ ...|||||||++|+|++++.+.++.. ....+++.+|.||||+.|+++++++||
T Consensus 30 ~~~~~~~~~~~g~~v~~~l~N~~---~~~Hp~HlHG~~F~vl~~~~~~~~~~-~~~~~~~~~~~~~DTv~v~~~~~~~i~ 105 (138)
T PF07731_consen 30 FGNTPVIEVKNGDVVEIVLQNNG---SMPHPFHLHGHSFQVLGRGGGPWNPD-DTQSYNPENPGWRDTVLVPPGGWVVIR 105 (138)
T ss_dssp SSTTSEEEEETTSEEEEEEEECT---TSSEEEEETTSEEEEEEETTEESTTH-CGGCCCSSSSSEESEEEEETTEEEEEE
T ss_pred CCCcceEEEeCCCEEEEEEECCC---CCccceEEEeeEEEeeecCCcccccc-cccccccccCcccccccccceeEEEEE
Confidence 45677899999999999999965 47999999999999999987765433 345678899999999999999999999
Q ss_pred EEecCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 512 FLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 512 f~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
|+++|||.|+|||||++|+|.|||+.|.|.+
T Consensus 106 ~~~~~~G~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 106 FRADNPGPWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp EEETSTEEEEEEESSHHHHHTT-EEEEEECH
T ss_pred EEeecceEEEEEEchHHHHhCCCeEEEEEcC
Confidence 9999999999999999999999999999865
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-20 Score=171.32 Aligned_cols=129 Identities=30% Similarity=0.592 Sum_probs=101.4
Q ss_pred cceeEEeeeccccChHHHHHHHHhcC----CCCCCCceEEEcCcCCCCCCCC-----CCceeeEEEccCCEEEEEEEecC
Q 008592 169 EEVPIIFGEWWKADTETIINEAMQTG----GAPNISDAFTINGLPGPFYNCA-----AKDTFKLKVTPGKTYLLRMINAA 239 (560)
Q Consensus 169 ~e~~l~~~d~~~~~~~~~~~~~~~~~----~~~~~~d~~lvNG~~~~~~~~~-----~~~~~~~~v~~g~~~rlRliN~~ 239 (560)
+|++|+++||+++...++.......+ ..+..+++++|||+.. +.|+ ....+.+++++|++|||||||+|
T Consensus 1 ~e~~i~l~DW~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~~~~v~~g~~~rlRliNa~ 78 (159)
T PF00394_consen 1 EEYVIMLSDWYHDDSDDLLQQYFAPGKGPMGMPPIPDSILINGKGR--FDCSSADYTGGEPPVIKVKPGERYRLRLINAG 78 (159)
T ss_dssp GGGEEEEEEETSSCTTTHBH-HSSCHHHSHSCTSSCSEEEETTBTC--BTTCTTGSTTSTSGEEEEETTTEEEEEEEEES
T ss_pred CeEEEEEeECCCCCHHHhhhhhccccccccCCCcCCcEEEECCccc--cccccccccccccceEEEcCCcEEEEEEEecc
Confidence 48899999999998887766444332 2367899999999975 4554 24678999999999999999999
Q ss_pred CCCeEEEEEcCCeEEEEEeCCCccCC--------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecC
Q 008592 240 LNDELFFSIANHTLTIVETDAVYAKS--------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQ 299 (560)
Q Consensus 240 ~~~~~~~~i~gh~~~via~DG~~v~p--------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~ 299 (560)
+.+.+.|+|+||+|+|||+||.+++| ++++++|+|++................|+|+|++
T Consensus 79 ~~~~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y~~ 158 (159)
T PF00394_consen 79 ASTSFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQRYDVLVTADQPPGNYWIRASYQHDSINDPQNGNALAILRYDG 158 (159)
T ss_dssp SS-BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEEEEEEEEECSCSSEEEEEEEESSSSSHSHGGGTTEEEEEETT
T ss_pred CCeeEEEEeeccceeEeeeccccccccccceEEeeCCeEEEEEEEeCCCCCeEEEEEecccCCCccCCCcEEEEEEEECC
Confidence 99999999999999999999999998 3457889998852222222344567899999986
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.4e-18 Score=150.18 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=80.9
Q ss_pred ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC---cCeeEEecCcccCCCcCCCCCCCcCccccCCC---C-e--
Q 008592 51 RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK---YNVTIHWHGVRQLRSGWADGPAYVTQCPIQTG---Q-S-- 121 (560)
Q Consensus 51 ~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~---~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG---~-~-- 121 (560)
..++...-+.++| .++|+|++++||+|+|+|+|.++ ....||+||...+..+-+||++.++||+|.|+ + .
T Consensus 36 ~~~~~~~~f~~~~-~~~P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~~~~~~~~i~p~~~~g~~~~ 114 (148)
T TIGR03095 36 MPGPSMYSFEIHD-LKNPTIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGLGFVAGTGFLPPPKSGKFGY 114 (148)
T ss_pred CCCCCceeEEecC-CCCCEEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCCCccccCcccCCCCCCccce
Confidence 3456677788888 67899999999999999999964 34666666665544444899999999999884 1 1
Q ss_pred EEEEEEEcccCcceeEeecccccc-ccceEeEEEe
Q 008592 122 YVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIIL 155 (560)
Q Consensus 122 ~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 155 (560)
.+++|+. .++||||||||..+++ +||+|+|||+
T Consensus 115 ~~~tf~f-~~aGtywyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 115 TDFTYHF-STAGTYWYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred eEEEEEC-CCCeEEEEEcCChhHHHCCCEEEEEEC
Confidence 2345554 4799999999998888 7999999995
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.3e-15 Score=161.33 Aligned_cols=100 Identities=17% Similarity=0.274 Sum_probs=84.6
Q ss_pred ceeEEEEECCCCCCc--EEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC--cCccccCCCCeEEEEEEEc
Q 008592 54 QTKSIVTVNGQFPGP--RIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY--VTQCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 54 ~~~~~~~~ng~~pGP--~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~--~tq~~i~pG~~~~Y~~~~~ 129 (560)
..+.+|+|||+.+++ .|++++||+|+|+|.|.+..++.|||||+...... .||... -....|.||++++|+|.+
T Consensus 483 m~~~~wtiNG~~~~~~~pl~v~~Gervri~l~N~t~~~HpmHlHG~~f~v~~-~~G~~~~~~dTv~V~Pg~t~~~~f~a- 560 (587)
T TIGR01480 483 MERFAWSFDGEAFGLKTPLRFNYGERLRVVLVNDTMMAHPIHLHGMWSELED-GQGEFQVRKHTVDVPPGGKRSFRVTA- 560 (587)
T ss_pred CceeEEEECCccCCCCCceEecCCCEEEEEEECCCCCCcceeEcCceeeeec-CCCcccccCCceeeCCCCEEEEEEEC-
Confidence 467889999999884 79999999999999999999999999999776542 466321 123789999999999997
Q ss_pred ccCcceeEeecccccc-ccceEeEEEe
Q 008592 130 GQRGTLFWHAHISWLR-ATLYGPIIIL 155 (560)
Q Consensus 130 ~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 155 (560)
+++|+||||||...+. .||++.+.|.
T Consensus 561 d~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 561 DALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred CCCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 8899999999987666 8999999874
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.6e-13 Score=113.45 Aligned_cols=113 Identities=16% Similarity=0.197 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhccCceEEEEEEEE--EEEe---eecCceeEEE-EECCCCCCcEEEEecCCEEEEEEEeCC
Q 008592 13 RATFLGFFALWILSELALAKHEGITRHYKFHIK--MQNI---TRLCQTKSIV-TVNGQFPGPRIIAREGDRLLIRVINNV 86 (560)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~---~~~g~~~~~~-~~ng~~pGP~i~~~~Gd~v~v~~~N~l 86 (560)
++++++++..++++.. +.+..|+|+++|. ...+ +..|.....+ ++|+++..+.|+|++||+|++++.|..
T Consensus 4 ~~~~~~~~~~~~~~~~----~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~~i~a~n~~~~P~~I~VkaGD~Vtl~vtN~d 79 (135)
T TIGR03096 4 KAMFAGFALGLLLMGT----AQAAEQSFTVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPEALVVKKGTPVKVTVENKS 79 (135)
T ss_pred HHHhHHHHHHHhhccc----hhhccceeEEEEeccccEeeEEEeCCEEEEEEEeeeeEEcCCEEEECCCCEEEEEEEeCC
Confidence 4555555554444333 4447889999999 6665 4568887777 999999999999999999999999998
Q ss_pred CcCe--eEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccc
Q 008592 87 KYNV--TIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR 145 (560)
Q Consensus 87 ~~~~--~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~ 145 (560)
+.++ .+++||+ +..|+||++.+|+|++ +++|+|||||-.|...
T Consensus 80 ~~~H~f~i~~~gi---------------s~~I~pGet~TitF~a-dKpG~Y~y~C~~HP~~ 124 (135)
T TIGR03096 80 PISEGFSIDAYGI---------------SEVIKAGETKTISFKA-DKAGAFTIWCQLHPKN 124 (135)
T ss_pred CCccceEECCCCc---------------ceEECCCCeEEEEEEC-CCCEEEEEeCCCCChh
Confidence 6543 3433332 2458999999999997 8999999999987654
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.9e-10 Score=115.99 Aligned_cols=91 Identities=21% Similarity=0.209 Sum_probs=76.3
Q ss_pred EEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCC--ccceeEeCCCCEEEEEEEec
Q 008592 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPA--ERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 438 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~--~rDTv~vpp~g~v~irf~ad 515 (560)
..++.|++++|.|.|.+. ...+.||++|++|.++... |.+ .++. ..||+.|.||+...|.++++
T Consensus 204 ~~v~~G~~~RlRiiNa~~--~~~~~~~~~g~~~~~v~~D-G~~-----------~~~~~~~~~~~~i~PG~R~dv~v~~~ 269 (311)
T TIGR02376 204 NALTAGVGERVLFVHSQP--NRDSRPHLIGGHGDYVWVT-GKF-----------ANPPNRDVETWFIPGGSAAAALYTFE 269 (311)
T ss_pred cccccCCcEEEEEEcCCC--CCCCCCeEecCCceEEEEC-Ccc-----------cCCCCCCcceEEECCCceEEEEEEeC
Confidence 367889999999999752 4678999999999999984 321 1222 26899999999999999999
Q ss_pred CceeeEEEeechhhh-hcccEEEEEEcC
Q 008592 516 NPGVWFMHCHLEVHT-SWGLKMAWIVND 542 (560)
Q Consensus 516 npG~w~~HCHil~H~-d~GMm~~~~V~~ 542 (560)
.||.|++|||...|+ ..||++.++|..
T Consensus 270 ~pG~y~~~~~~~~~~~~~g~~~~i~~~g 297 (311)
T TIGR02376 270 QPGVYAYVDHNLIEAFEKGAAAQVKVEG 297 (311)
T ss_pred CCeEEEEECcHHHHHHhCCCEEEEEECC
Confidence 999999999999998 779999998854
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.92 E-value=4e-09 Score=115.03 Aligned_cols=92 Identities=20% Similarity=0.333 Sum_probs=71.9
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
++++++.|+++++.+.|.. ....|+||+||... .+. .-.+. ........|+||+..+++|+++
T Consensus 55 P~i~~~~Gd~v~v~v~N~l--~~~~~~iH~HG~~~--~~~--~~~DG-----------~~~~tq~~i~pg~s~~y~f~~~ 117 (566)
T PLN02604 55 PTILAQQGDTVIVELKNSL--LTENVAIHWHGIRQ--IGT--PWFDG-----------TEGVTQCPILPGETFTYEFVVD 117 (566)
T ss_pred CcEEEECCCEEEEEEEeCC--CCCCCCEEeCCCCC--CCC--ccccC-----------CCccccCccCCCCeEEEEEEcC
Confidence 4588999999999999963 24689999999952 111 00010 0112345789999999999999
Q ss_pred CceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 516 NPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 516 npG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
++|.|.||||...|++.||+..+.|.++.
T Consensus 118 ~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~ 146 (566)
T PLN02604 118 RPGTYLYHAHYGMQREAGLYGSIRVSLPR 146 (566)
T ss_pred CCEEEEEeeCcHHHHhCCCeEEEEEEecC
Confidence 99999999999999999999999998764
|
|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.3e-08 Score=85.78 Aligned_cols=91 Identities=19% Similarity=0.276 Sum_probs=68.8
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+++.++.|+.|++.+.|.. ..++.+|+||...-- ..+. +.... . -.-.|.||+..+.+|++
T Consensus 25 GPtI~v~~Gd~v~i~~~N~l---~~~~siH~HG~~~~~-----~~~~---DG~~~------~-~~~~i~pG~~~~Y~~~~ 86 (117)
T PF07732_consen 25 GPTIRVREGDTVRITVTNNL---DEPTSIHWHGLHQPP-----SPWM---DGVPG------V-TQCPIAPGESFTYEFTA 86 (117)
T ss_dssp EEEEEEETTEEEEEEEEEES---SSGBSEEEETSBSTT-----GGGG---SGGTT------T-SGSSBSTTEEEEEEEEE
T ss_pred CCEEEEEcCCeeEEEEEecc---ccccccccceeeeee-----eeec---CCccc------c-cceeEEeecceeeeEee
Confidence 56799999999999999964 478999999976410 0000 00000 0 01348899999999999
Q ss_pred cC-ceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 515 DN-PGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 515 dn-pG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
+. +|.|.||||...|...||...+.|++.
T Consensus 87 ~~~~Gt~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 87 NQQAGTYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp SSCSEEEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred eccccceeEeeCCCchhcCcCEEEEEEcCC
Confidence 88 999999999999988999999999764
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.65 E-value=5e-08 Score=86.71 Aligned_cols=88 Identities=24% Similarity=0.346 Sum_probs=70.2
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC--------------CcCccccCCCCeEEEEEEEcccCc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA--------------YVTQCPIQTGQSYVYNFTVTGQRG 133 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~--------------~~tq~~i~pG~~~~Y~~~~~~~~G 133 (560)
+.+.++.|+.+++.+.|.....+.+|+||.........++.. ...-..|.||+..+.+|.+ +.+|
T Consensus 34 ~~~~~~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~-~~~G 112 (138)
T PF07731_consen 34 PVIEVKNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRA-DNPG 112 (138)
T ss_dssp SEEEEETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEE-TSTE
T ss_pred ceEEEeCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEe-ecce
Confidence 799999999999999999999999999998765332122111 0122448899999999998 7999
Q ss_pred ceeEeecccccc-ccceEeEEEeC
Q 008592 134 TLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 134 t~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
.|.||||..... .||.+.+.|.+
T Consensus 113 ~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 113 PWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp EEEEEESSHHHHHTT-EEEEEECH
T ss_pred EEEEEEchHHHHhCCCeEEEEEcC
Confidence 999999997665 89999999975
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.5e-06 Score=90.89 Aligned_cols=198 Identities=15% Similarity=0.167 Sum_probs=112.5
Q ss_pred EEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEe-cCcccCCCcCCCCCC-----CcCccccCCCCeEEEEEEEc
Q 008592 57 SIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHW-HGVRQLRSGWADGPA-----YVTQCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 57 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~-HG~~~~~~~~~DGv~-----~~tq~~i~pG~~~~Y~~~~~ 129 (560)
..+++||+. .|.+.+. |.++++||.|... ....+.+ .|....... .||.+ .+.+..|.||++++..++.
T Consensus 213 d~~lVNG~~-~p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~vIa-~DG~~l~~P~~v~~l~lapGeR~dvlv~~- 288 (523)
T PRK10965 213 DTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLYVIA-SDGGLLAEPVKVSELPILMGERFEVLVDT- 288 (523)
T ss_pred CeEEECCcc-cceeecC-CCEEEEEEEeccCCceEEEEEcCCceEEEEE-eCCCcccCccEeCeEEECccceEEEEEEc-
Confidence 468999995 6888875 6799999999974 4556666 454322222 78843 2345679999999988887
Q ss_pred ccCcceeEeecccccccc--------ceEeEEEeCCC---CCCCC-----CCC-C------CcceeEEeeeccc------
Q 008592 130 GQRGTLFWHAHISWLRAT--------LYGPIIILPKQ---QASYP-----FPQ-P------FEEVPIIFGEWWK------ 180 (560)
Q Consensus 130 ~~~Gt~wYH~H~~~~~~G--------l~G~liV~~~~---~~~~~-----~~~-~------~~e~~l~~~d~~~------ 180 (560)
.+.|.++...-.... .| -+-.+.|.... ....| .+. . .+.+.+.+..+..
T Consensus 289 ~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~r~~~l~~~~~~~~~~m~~ 367 (523)
T PRK10965 289 SDGKAFDLVTLPVSQ-MGMALAPFDKPLPVLRIQPLLISASGTLPDSLASLPALPSLEGLTVRRLQLSMDPRLDMMGMQM 367 (523)
T ss_pred CCCceEEEEEecccC-cccccccCCCceeEEEEeccCcCCCCcCChhhccCCCCCcccccceeEEEEeeccccchhhhhh
Confidence 456777766532111 11 11223333211 00010 000 0 0122232211100
Q ss_pred ---cChHHHHHHH--------H--------hcC---CCC--CCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEE
Q 008592 181 ---ADTETIINEA--------M--------QTG---GAP--NISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMI 236 (560)
Q Consensus 181 ---~~~~~~~~~~--------~--------~~~---~~~--~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRli 236 (560)
.......... + ..+ ..+ .....++|||+.++ . ..+.++++.|++.+|+|+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~---~---~~~~~~~~~G~~e~w~i~ 441 (523)
T PRK10965 368 LMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKINGKAFD---M---NKPMFAAKKGQYERWVIS 441 (523)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCCCeECC---C---CCcceecCCCCEEEEEEE
Confidence 0000000000 0 000 000 00112489999743 1 245678999999999999
Q ss_pred ecCCCCeEEEEEcCCeEEEEEeCCCccCC
Q 008592 237 NAALNDELFFSIANHTLTIVETDAVYAKS 265 (560)
Q Consensus 237 N~~~~~~~~~~i~gh~~~via~DG~~v~p 265 (560)
|.+....+.|||+|+.|+|++.||.+.++
T Consensus 442 N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~ 470 (523)
T PRK10965 442 GVGDMMLHPFHIHGTQFRILSENGKPPAA 470 (523)
T ss_pred eCCCCCccCeEEeCcEEEEEEecCCCCCc
Confidence 99976679999999999999999987654
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.8e-07 Score=99.29 Aligned_cols=93 Identities=22% Similarity=0.307 Sum_probs=70.9
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.++++.|+.+++.+.|.. ....+.||+||.+. .+. .-.+. .+--....|+||+..+.+|++
T Consensus 31 GP~i~~~~Gd~v~v~v~N~l--~~~~t~iHwHGl~~--~~~--~~~DG-----------~~~vtq~~I~PG~s~~y~f~~ 93 (541)
T TIGR03388 31 GPTIRAQAGDTIVVELTNKL--HTEGVVIHWHGIRQ--IGT--PWADG-----------TAGVTQCAINPGETFIYNFVV 93 (541)
T ss_pred CCeEEEEcCCEEEEEEEECC--CCCCccEEecCcCC--cCC--cccCC-----------CCccccCCcCCCCEEEEEEEc
Confidence 34688999999999999963 23679999999952 110 00000 000113468999999999999
Q ss_pred cCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 515 DNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 515 dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+.+|.|.||||...|...||.+.+.|.++.
T Consensus 94 ~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~ 123 (541)
T TIGR03388 94 DRPGTYFYHGHYGMQRSAGLYGSLIVDVPD 123 (541)
T ss_pred CCCEEEEEEecchHHhhccceEEEEEecCC
Confidence 999999999999999999999999998764
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.6e-05 Score=86.64 Aligned_cols=84 Identities=20% Similarity=0.221 Sum_probs=66.6
Q ss_pred EEEEECCCC-C--------CcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeE
Q 008592 57 SIVTVNGQF-P--------GPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSY 122 (560)
Q Consensus 57 ~~~~~ng~~-p--------GP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~ 122 (560)
..+++||+. + -++|.|++|+++++||.|.. .....+|.+|....... .||++ .+....|.||+++
T Consensus 167 d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa-~DG~~~~P~~~~~l~i~~GqRy 245 (539)
T TIGR03389 167 DAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVE-VDATYTKPFKTKTIVIGPGQTT 245 (539)
T ss_pred ceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEE-eCCcccCceEeCeEEecCCCEE
Confidence 468999984 1 15899999999999999997 45578888887766554 79974 2345669999999
Q ss_pred EEEEEEcccCcceeEeecc
Q 008592 123 VYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 123 ~Y~~~~~~~~Gt~wYH~H~ 141 (560)
+..+++.+.+|.||.+.+.
T Consensus 246 dVlv~a~~~~g~y~i~~~~ 264 (539)
T TIGR03389 246 NVLLTADQSPGRYFMAARP 264 (539)
T ss_pred EEEEECCCCCceEEEEEec
Confidence 9999985558999999875
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.2e-05 Score=85.93 Aligned_cols=186 Identities=14% Similarity=0.113 Sum_probs=106.4
Q ss_pred eEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEe-cCcccCCCcCCCCCCC-----cCccccCCCCeEEEEEEE
Q 008592 56 KSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHW-HGVRQLRSGWADGPAY-----VTQCPIQTGQSYVYNFTV 128 (560)
Q Consensus 56 ~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~-HG~~~~~~~~~DGv~~-----~tq~~i~pG~~~~Y~~~~ 128 (560)
-.++++||+. .|.|.|+.| ++++|+.|... ....+++ .|....... .||-+. +++..|.||++++.-.+.
T Consensus 209 gd~~lvNG~~-~p~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~~vIa-~DGg~~~~P~~~~~l~l~pGeR~dvlVd~ 285 (471)
T PRK10883 209 GDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNARRYQLQMSDGRPLHVIA-GDQGFLPAPVSVKQLSLAPGERREILVDM 285 (471)
T ss_pred CCeeEECCcc-CCeEEecCC-EEEEEEEEccCCceEEEEEcCCCeEEEEE-eCCCcccCCcEeCeEEECCCCeEEEEEEC
Confidence 3468999984 589999875 89999999985 5678888 565333332 685331 356779999999998887
Q ss_pred cccCcceeEeecccc-ccccceE------------eEEEeCCCCCCCCCCCCCcceeEEeeec--cccChHHHHHHHHhc
Q 008592 129 TGQRGTLFWHAHISW-LRATLYG------------PIIILPKQQASYPFPQPFEEVPIIFGEW--WKADTETIINEAMQT 193 (560)
Q Consensus 129 ~~~~Gt~wYH~H~~~-~~~Gl~G------------~liV~~~~~~~~~~~~~~~e~~l~~~d~--~~~~~~~~~~~~~~~ 193 (560)
.+.+.+.+++-... ....+.+ .+-++....... . ....+..+... ......+. ..+..
T Consensus 286 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~p~~l~~~~~~~~~~~~~-~~~~l- 358 (471)
T PRK10883 286 -SNGDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLLPL-V---TDNLPMRLLPDEIMEGSPIRS-REISL- 358 (471)
T ss_pred -CCCceEEEECCCccccccccccccCCccccccceeEEEEccccccC-C---CCcCChhhcCCCCCCCCCcce-EEEEe-
Confidence 55566666652111 1111111 111111110000 0 00000000000 00000000 00000
Q ss_pred CCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC
Q 008592 194 GGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS 265 (560)
Q Consensus 194 ~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p 265 (560)
..+.++|||+.++. ....++++.|++++|+|.|.. .+.|||++|.|+|++.||....+
T Consensus 359 -----~~~~~~INg~~~~~------~~~~~~~~~g~~e~W~~~n~~---~HP~HlHg~~FqVl~~~G~~~~~ 416 (471)
T PRK10883 359 -----GDDLPGINGALWDM------NRIDVTAQQGTWERWTVRADM---PQAFHIEGVMFLIRNVNGAMPFP 416 (471)
T ss_pred -----cCCcCccCCcccCC------CcceeecCCCCEEEEEEECCC---CcCEeECCccEEEEEecCCCCCc
Confidence 01224699997531 233468999999999998863 68899999999999999975543
|
|
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=7.7e-06 Score=70.42 Aligned_cols=73 Identities=19% Similarity=0.315 Sum_probs=53.6
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+| +++|....++++.+.|..-. . -+...+.||++++|.|+. +|+|-|+|-.| ..+|
T Consensus 47 ~~i~v~~Gd~V--~~~N~~~~~H~v~~~~~~~~----~-----~~~~~~~pg~t~~~tF~~---~G~y~y~C~~H-~~~g 111 (119)
T PRK02710 47 STLTIKAGDTV--KWVNNKLAPHNAVFDGAKEL----S-----HKDLAFAPGESWEETFSE---AGTYTYYCEPH-RGAG 111 (119)
T ss_pred CEEEEcCCCEE--EEEECCCCCceEEecCCccc----c-----ccccccCCCCEEEEEecC---CEEEEEEcCCC-ccCC
Confidence 78999999985 56788777888876643110 0 111347899999999973 89999999732 2379
Q ss_pred ceEeEEEe
Q 008592 148 LYGPIIIL 155 (560)
Q Consensus 148 l~G~liV~ 155 (560)
|.|.|+|+
T Consensus 112 M~G~I~V~ 119 (119)
T PRK02710 112 MVGKITVE 119 (119)
T ss_pred cEEEEEEC
Confidence 99999984
|
|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.1e-06 Score=71.19 Aligned_cols=70 Identities=14% Similarity=0.174 Sum_probs=46.7
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
..|+++.|++|+|+++|.....+.+...++... ..|.||++.+++|+. .++|+|=|+|-.+. .
T Consensus 35 ~~i~v~~G~~v~l~~~N~~~~~h~~~i~~~~~~-------------~~l~~g~~~~~~f~~-~~~G~y~~~C~~~~--~- 97 (104)
T PF13473_consen 35 STITVKAGQPVTLTFTNNDSRPHEFVIPDLGIS-------------KVLPPGETATVTFTP-LKPGEYEFYCTMHP--N- 97 (104)
T ss_dssp -EEEEETTCEEEEEEEE-SSS-EEEEEGGGTEE-------------EEE-TT-EEEEEEEE--S-EEEEEB-SSS---T-
T ss_pred CEEEEcCCCeEEEEEEECCCCcEEEEECCCceE-------------EEECCCCEEEEEEcC-CCCEEEEEEcCCCC--c-
Confidence 599999999999999999988777766664332 458999999999985 89999999999766 2
Q ss_pred ceEeEEE
Q 008592 148 LYGPIII 154 (560)
Q Consensus 148 l~G~liV 154 (560)
|.|-|||
T Consensus 98 m~G~liV 104 (104)
T PF13473_consen 98 MKGTLIV 104 (104)
T ss_dssp TB-----
T ss_pred ceecccC
Confidence 7777775
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=98.20 E-value=7e-06 Score=89.73 Aligned_cols=86 Identities=21% Similarity=0.336 Sum_probs=70.4
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccce------eEeCCCCEE
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNT------VGVPSGGWV 508 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDT------v~vpp~g~v 508 (560)
.++++++.|+++++.+.|.- ....+.||.||.+. .+ ..|.|- -.|+||+..
T Consensus 53 GP~i~~~~Gd~v~v~v~N~l--~~~~tsiHwHGl~~----~~-----------------~~~~DGv~gvtq~pI~PG~s~ 109 (574)
T PLN02191 53 GPTIDAVAGDTIVVHLTNKL--TTEGLVIHWHGIRQ----KG-----------------SPWADGAAGVTQCAINPGETF 109 (574)
T ss_pred CCeEEEEcCCEEEEEEEECC--CCCCccEECCCCCC----CC-----------------CccccCCCccccCCcCCCCeE
Confidence 35689999999999999963 33579999999973 11 012221 358999999
Q ss_pred EEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 509 AIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 509 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
+.+|+++.+|.|.||||...+...||.+.+.|++.
T Consensus 110 ~Y~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~ 144 (574)
T PLN02191 110 TYKFTVEKPGTHFYHGHYGMQRSAGLYGSLIVDVA 144 (574)
T ss_pred EEEEECCCCeEEEEeeCcHHHHhCCCEEEEEEccC
Confidence 99999999999999999999999999999999754
|
|
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.2e-05 Score=71.66 Aligned_cols=90 Identities=17% Similarity=0.244 Sum_probs=58.5
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcce--EEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCC---C--CEE
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNF--FVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPS---G--GWV 508 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F--~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp---~--g~v 508 (560)
+.+.++.|++|++.+.|... ...|.|-||.+.- .....-.| .|.....-.+|+ | ++.
T Consensus 52 P~I~v~~Gd~V~v~v~N~~~--~~~H~~~I~~~g~~~~~~p~mdG--------------~~~~~~~~i~p~~~~g~~~~~ 115 (148)
T TIGR03095 52 PTIVIPEGVTVHFTVINTDT--DSGHNFDISKRGPPYPYMPGMDG--------------LGFVAGTGFLPPPKSGKFGYT 115 (148)
T ss_pred CEEEEcCCCEEEEEEEeCCC--CccccEEeecCCCccccccccCC--------------CCccccCcccCCCCCCcccee
Confidence 56889999999999999642 3466666663221 00000000 011111222222 2 246
Q ss_pred EEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 509 AIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 509 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.+.|+++.+|.|.||||+..|...||...+.|+
T Consensus 116 ~~tf~f~~aGtywyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 116 DFTYHFSTAGTYWYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred EEEEECCCCeEEEEEcCChhHHHCCCEEEEEEC
Confidence 788888899999999999999999999999873
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.5e-05 Score=72.56 Aligned_cols=94 Identities=17% Similarity=0.234 Sum_probs=77.7
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+++.++.|++++|.|.|.+. ...+.|++.||.|+|++.... +..|...|++.|.+|+.+.|.+++
T Consensus 59 ~~~~~v~~g~~~rlRliNa~~--~~~~~~~i~gh~~~Via~DG~------------~v~p~~~~~l~l~~G~R~dvlv~~ 124 (159)
T PF00394_consen 59 PPVIKVKPGERYRLRLINAGA--STSFNFSIDGHPMTVIAADGV------------PVEPYKVDTLVLAPGQRYDVLVTA 124 (159)
T ss_dssp SGEEEEETTTEEEEEEEEESS--S-BEEEEETTBCEEEEEETTE------------EEEEEEESBEEE-TTEEEEEEEEE
T ss_pred cceEEEcCCcEEEEEEEeccC--CeeEEEEeeccceeEeeeccc------------cccccccceEEeeCCeEEEEEEEe
Confidence 557899999999999999763 468999999999999998422 233778899999999999999999
Q ss_pred cC-ceeeEEEe----echhhhhcccEEEEEEcC
Q 008592 515 DN-PGVWFMHC----HLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 515 dn-pG~w~~HC----Hil~H~d~GMm~~~~V~~ 542 (560)
+. +|.|.++| +...+...|+...+.+.+
T Consensus 125 ~~~~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y~ 157 (159)
T PF00394_consen 125 DQPPGNYWIRASYQHDSINDPQNGNALAILRYD 157 (159)
T ss_dssp CSCSSEEEEEEEESSSSSHSHGGGTTEEEEEET
T ss_pred CCCCCeEEEEEecccCCCccCCCcEEEEEEEEC
Confidence 87 99999999 667788888888887654
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.9e-05 Score=65.70 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=54.9
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc--CccccCCCCeEEEEEEEcccCcceeEeecccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV--TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~--tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~ 145 (560)
..|++++||+| +++|....++++.++........ .+..+.. +...+.||+++++.|.. +|+|+|||- ....
T Consensus 17 ~~i~v~~G~~V--~~~N~~~~~H~~~~~~~~~~~~~-~~~~~~~~~~~~~~~pG~t~~~tF~~---~G~y~y~C~-~H~~ 89 (99)
T TIGR02656 17 AKISIAAGDTV--EWVNNKGGPHNVVFDEDAVPAGV-KELAKSLSHKDLLNSPGESYEVTFST---PGTYTFYCE-PHRG 89 (99)
T ss_pred CEEEECCCCEE--EEEECCCCCceEEECCCCCccch-hhhcccccccccccCCCCEEEEEeCC---CEEEEEEcC-Cccc
Confidence 68999999986 55687777787777643221110 0001111 22346899999998863 899999998 3334
Q ss_pred ccceEeEEEe
Q 008592 146 ATLYGPIIIL 155 (560)
Q Consensus 146 ~Gl~G~liV~ 155 (560)
+||.|.|+|+
T Consensus 90 aGM~G~I~V~ 99 (99)
T TIGR02656 90 AGMVGKITVE 99 (99)
T ss_pred cCCEEEEEEC
Confidence 7999999985
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00024 Score=77.33 Aligned_cols=83 Identities=19% Similarity=0.229 Sum_probs=61.9
Q ss_pred EEEEECCCC---------------CCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcc-cCCCcCCCCCC----CcCccc
Q 008592 57 SIVTVNGQF---------------PGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVR-QLRSGWADGPA----YVTQCP 115 (560)
Q Consensus 57 ~~~~~ng~~---------------pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~-~~~~~~~DGv~----~~tq~~ 115 (560)
..+++||+. ..|+|+|++|+++++|+.|... ....+++.|.. ..... .||.+ .+....
T Consensus 172 d~~liNG~~~~~~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa-~DG~~~~P~~v~~l~ 250 (538)
T TIGR03390 172 EAVLLNGKSGNKSFYAQINPSGSCMLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIE-ADGSYTKPAKIDHLQ 250 (538)
T ss_pred ceEEECCccccccccccccCCCCCcceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEE-eCCCCCCceEeCeEE
Confidence 457899983 1378999999999999999975 45678887766 44443 79974 123456
Q ss_pred cCCCCeEEEEEEEccc-------CcceeEeec
Q 008592 116 IQTGQSYVYNFTVTGQ-------RGTLFWHAH 140 (560)
Q Consensus 116 i~pG~~~~Y~~~~~~~-------~Gt~wYH~H 140 (560)
|.||++++..+++.+. +|-||-..-
T Consensus 251 l~~GqRydVlv~~~~~~~~~~~~~~~Y~ir~~ 282 (538)
T TIGR03390 251 LGGGQRYSVLFKAKTEDELCGGDKRQYFIQFE 282 (538)
T ss_pred EccCCEEEEEEECCCccccccCCCCcEEEEEe
Confidence 9999999999998432 388997764
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=97.90 E-value=4.7e-05 Score=63.32 Aligned_cols=82 Identities=20% Similarity=0.250 Sum_probs=52.4
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCccc-CCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQ-LRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~-~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
..|++++||+| ++.|....++++.+=--.. .........+.-....+.||++++++|+ ++|+|.|+|-. ...+
T Consensus 17 ~~i~V~~G~tV--~~~n~~~~~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~tF~---~~G~y~y~C~P-H~~~ 90 (99)
T PF00127_consen 17 SEITVKAGDTV--TFVNNDSMPHNVVFVADGMPAGADSDYVPPGDSSPLLAPGETYSVTFT---KPGTYEYYCTP-HYEA 90 (99)
T ss_dssp SEEEEETTEEE--EEEEESSSSBEEEEETTSSHTTGGHCHHSTTCEEEEBSTTEEEEEEEE---SSEEEEEEETT-TGGT
T ss_pred CEEEECCCCEE--EEEECCCCCceEEEecccccccccccccCccccceecCCCCEEEEEeC---CCeEEEEEcCC-Cccc
Confidence 79999999985 4666665666665532100 0000000000001234789999999997 69999999973 4458
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
||.|.|+|+
T Consensus 91 GM~G~i~V~ 99 (99)
T PF00127_consen 91 GMVGTIIVE 99 (99)
T ss_dssp TSEEEEEEE
T ss_pred CCEEEEEEC
Confidence 999999995
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00021 Score=76.54 Aligned_cols=192 Identities=17% Similarity=0.105 Sum_probs=112.1
Q ss_pred eeEEEEECCCCCCcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeEEEEEEEc
Q 008592 55 TKSIVTVNGQFPGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 55 ~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~~Y~~~~~ 129 (560)
......+||+.. ++...+|..+++|+.|.. .....+++.|....... .||.+ .+.+..+.|||+++.....
T Consensus 188 ~g~~~~vnG~~~--p~~~~~~g~~rlRl~n~~~~~~~~~~~~~~~~~Vi~-~DG~~v~~~~~d~~~l~p~er~~v~v~~- 263 (451)
T COG2132 188 PGDTLLVNGAIL--PFKAVPGGVVRLRLLNAGNARTYHLALGGGPLTVIA-VDGGPLPPVSVDELYLAPGERYEVLVDM- 263 (451)
T ss_pred CCCeEEECCCcc--ceeecCCCeEEEEEEecCCceEEEEEecCceEEEEE-eCCcCcCceeeeeEEecCcceEEEEEEc-
Confidence 334455666332 444556666999999998 67777888876665554 68865 5677889999999988886
Q ss_pred ccCcceeEeeccccccccceEeEEEeCCCCCCCCC-------CCCC---cceeEEeeeccccChHHHHHHHHhcCCCCCC
Q 008592 130 GQRGTLFWHAHISWLRATLYGPIIILPKQQASYPF-------PQPF---EEVPIIFGEWWKADTETIINEAMQTGGAPNI 199 (560)
Q Consensus 130 ~~~Gt~wYH~H~~~~~~Gl~G~liV~~~~~~~~~~-------~~~~---~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 199 (560)
...|++-+.+.......-+.+..-........++. +..+ ......+.................. ....
T Consensus 264 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~ 341 (451)
T COG2132 264 NDGGAVTLTALGEDMPDTLKGFRAPNPILTPSYPVLNGRVGAPTGDMADHAPVGLLVTILVEPGPNRDTDFHLI--GGIG 341 (451)
T ss_pred CCCCeEEEEeccccCCceeeeeeccccccccccccccccccCCCcchhhccccccchhhcCCCcccccccchhh--cccc
Confidence 44788888888722112222222111111000000 0001 1111111111111110000000000 0112
Q ss_pred CceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeC
Q 008592 200 SDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETD 259 (560)
Q Consensus 200 ~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~D 259 (560)
...+.+||+..+. ....+.++.|+++||+|.|-+. -.+.||++|+.|.|++.|
T Consensus 342 ~~~~~~n~~~~~~------~~~~~~~~~G~~~~~~i~n~~~-~~HP~HlHg~~F~v~~~~ 394 (451)
T COG2132 342 GYVWAINGKAFDD------NRVTLIAKAGTRERWVLTNDTP-MPHPFHLHGHFFQVLSGD 394 (451)
T ss_pred cccccccCccCCC------CcCceeecCCCEEEEEEECCCC-CccCeEEcCceEEEEecC
Confidence 3457888886531 2467899999999999999997 788899999999999999
|
|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0001 Score=59.05 Aligned_cols=74 Identities=18% Similarity=0.253 Sum_probs=52.9
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
.+.|++++||+|. +.|....++++++.........+.. ..+.||+++++.| .++|+|-|||-.|.
T Consensus 10 P~~i~v~~GdtVt--~~N~d~~~Hnv~~~~g~~~~~~~~~-------~~~~~g~~~~~tf---~~~G~y~y~C~~Hp--- 74 (83)
T TIGR02657 10 TPELHVKVGDTVT--WINREAMPHNVHFVAGVLGEAALKG-------PMMKKEQAYSLTF---TEAGTYDYHCTPHP--- 74 (83)
T ss_pred CCEEEECCCCEEE--EEECCCCCccEEecCCCCccccccc-------cccCCCCEEEEEC---CCCEEEEEEcCCCC---
Confidence 3789999999965 6788878888887653211111111 1247888888777 46999999998766
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
.|.|-++|+
T Consensus 75 ~M~G~v~V~ 83 (83)
T TIGR02657 75 FMRGKVVVE 83 (83)
T ss_pred CCeEEEEEC
Confidence 599999885
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00017 Score=77.49 Aligned_cols=100 Identities=17% Similarity=0.243 Sum_probs=70.5
Q ss_pred EEeeecCceeE--EEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEE
Q 008592 47 QNITRLCQTKS--IVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVY 124 (560)
Q Consensus 47 ~~~~~~g~~~~--~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y 124 (560)
..+..+|.+.. +.+..-.|--+.|+|++||+|+++|+|.....-.+ ||..++..+ + +.-+.||++.+.
T Consensus 532 ~~v~R~G~kv~Vym~a~a~~f~p~~i~Vk~GDeVt~~lTN~d~~~DVi--HGF~Ip~~n----I----~~dv~PG~t~sv 601 (635)
T PRK02888 532 SKVIRDGNKVRVYMTSQAPAFGLREFTVKQGDEVTVIVTNLDKVEDLT--HGFAIPNYG----V----NMEVAPQATASV 601 (635)
T ss_pred cceEEeCCEEEEEEEEEecccCCceEEecCCCEEEEEEEeCCcccccc--cceeecccC----c----cEEEcCCceEEE
Confidence 34556675444 45555566557899999999999999964322122 666554321 1 134789999999
Q ss_pred EEEEcccCcceeEeecccc--ccccceEeEEEeCC
Q 008592 125 NFTVTGQRGTLFWHAHISW--LRATLYGPIIILPK 157 (560)
Q Consensus 125 ~~~~~~~~Gt~wYH~H~~~--~~~Gl~G~liV~~~ 157 (560)
.|++ +++|.|||||..-. .-.+|.|-|+|+++
T Consensus 602 tF~a-dkPGvy~~~CtefCGa~H~~M~G~~iVep~ 635 (635)
T PRK02888 602 TFTA-DKPGVYWYYCTWFCHALHMEMRGRMLVEPK 635 (635)
T ss_pred EEEc-CCCEEEEEECCcccccCcccceEEEEEEeC
Confidence 9997 89999999998632 22699999999864
|
|
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00097 Score=59.73 Aligned_cols=99 Identities=14% Similarity=0.105 Sum_probs=71.8
Q ss_pred EEEEECCCCCC-cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCC-------cCCCCCC----CcC-----ccccCCC
Q 008592 57 SIVTVNGQFPG-PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRS-------GWADGPA----YVT-----QCPIQTG 119 (560)
Q Consensus 57 ~~~~~ng~~pG-P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~-------~~~DGv~----~~t-----q~~i~pG 119 (560)
..+-|||+..| ++|.+..|-+|.|++.|....++++-. + +.++ -..||.. |.+ -..|.+|
T Consensus 73 ~~fNfnGts~G~mtIyiPaGw~V~V~f~N~e~~pHnl~i--v-~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~G 149 (195)
T TIGR03094 73 YPFNFNGTSYGAMTIYLPAGWNVYVTFTNYESLPHNLKL--L-PNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSG 149 (195)
T ss_pred ccccccCccCCceEEEEeCCCEEEEEEEcCCCCCccEEE--e-cCCCCCCCccccccCceeEeecccccCcccccccccc
Confidence 44778999888 899999999999999999877766554 1 1111 1136632 222 1335677
Q ss_pred CeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCC
Q 008592 120 QSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 120 ~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 159 (560)
++..=.|. +-++|+|||-|-.-+.. +||+|-+||...-.
T Consensus 150 qs~sg~~~-~~~~G~YwlvCgipGHAesGMw~~lIVSs~vt 189 (195)
T TIGR03094 150 HSRSGWWN-DTSAGKYWLVCGITGHAESGMWAVVIVSSNVT 189 (195)
T ss_pred ceeEEEec-cCCCeeEEEEcccCChhhcCcEEEEEEecCcc
Confidence 77555555 47999999999988776 99999999987643
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00018 Score=77.96 Aligned_cols=92 Identities=15% Similarity=0.135 Sum_probs=70.3
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.++++.|+++++.+.|.- ....-+|.||-+. .... ..| ..+- -...|+||+.-+.+|++
T Consensus 56 GP~I~~~~GD~v~V~v~N~L---~~~ttiHWHGl~~--~~~~--~~D-----------Gv~g-tQcpI~PG~sftY~F~~ 116 (545)
T PLN02168 56 GPLLNATANDVINVNIFNNL---TEPFLMTWNGLQL--RKNS--WQD-----------GVRG-TNCPILPGTNWTYRFQV 116 (545)
T ss_pred CCcEEEECCCEEEEEEEeCC---CCCccEeeCCccC--CCCC--CcC-----------CCCC-CcCCCCCCCcEEEEEEe
Confidence 34589999999999999964 3678999999763 1110 000 0011 12468999999999998
Q ss_pred -cCceeeEEEeechhhhhcccEEEEEEcCCCC
Q 008592 515 -DNPGVWFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 515 -dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
+.+|.+.||||...+...||...+.|.++++
T Consensus 117 ~~q~GT~WYHsH~~~Q~~~GL~G~lII~~~~~ 148 (545)
T PLN02168 117 KDQIGSYFYFPSLLLQKAAGGYGAIRIYNPEL 148 (545)
T ss_pred CCCCceEEEecChhhhhhCcceeEEEEcCCcc
Confidence 5899999999999999999999999987643
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00019 Score=77.91 Aligned_cols=90 Identities=13% Similarity=0.063 Sum_probs=68.9
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.++++.|++|++.+.|.- .....+|.||-+..- .. ..+..-----.|+||+..+.+|+.
T Consensus 59 GP~I~~~~GD~v~v~v~N~L---~~~ttiHWHGl~~~~----~~------------~~DGv~~tQ~pI~PG~sf~Y~F~~ 119 (539)
T PLN02835 59 GPRLDVVTNDNIILNLINKL---DQPFLLTWNGIKQRK----NS------------WQDGVLGTNCPIPPNSNYTYKFQT 119 (539)
T ss_pred CCCEEEECCCEEEEEEEeCC---CCCCcEEeCCcccCC----CC------------CCCCCccCcCCCCCCCcEEEEEEE
Confidence 34589999999999999974 368899999987411 00 001000012358999999999986
Q ss_pred -cCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 515 -DNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 515 -dnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
+.+|.+.||||...+...||...+.|.++
T Consensus 120 ~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~ 149 (539)
T PLN02835 120 KDQIGTFTYFPSTLFHKAAGGFGAINVYER 149 (539)
T ss_pred CCCCEeEEEEeCccchhcCcccceeEEeCC
Confidence 68999999999999999999999999654
|
|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00031 Score=58.31 Aligned_cols=82 Identities=16% Similarity=0.229 Sum_probs=57.6
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ...|-+.++...+..-.. ........+++.+.||....+.|..
T Consensus 18 ~i~v~~G~~V~~~--N~~---~~~H~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~pG~t~~~tF~~-- 76 (99)
T TIGR02656 18 KISIAAGDTVEWV--NNK---GGPHNVVFDEDAVPAGVK--------------ELAKSLSHKDLLNSPGESYEVTFST-- 76 (99)
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEECCCCCccchh--------------hhcccccccccccCCCCEEEEEeCC--
Confidence 4789999999997 432 367888776543211100 0011123467788999998887665
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||- -|..+||...+.|+
T Consensus 77 ~G~y~y~C~--~H~~aGM~G~I~V~ 99 (99)
T TIGR02656 77 PGTYTFYCE--PHRGAGMVGKITVE 99 (99)
T ss_pred CEEEEEEcC--CccccCCEEEEEEC
Confidence 999999998 89999999999874
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00039 Score=75.36 Aligned_cols=90 Identities=17% Similarity=0.144 Sum_probs=69.2
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.++++.|+++++.+.|.- ....-+|.||-+..- .. +.+..---...|+||+.-+.+|++
T Consensus 46 GP~I~~~~GD~v~V~v~N~L---~~~ttiHWHGl~q~~----~~------------~~DGv~~tqcPI~PG~sftY~F~~ 106 (536)
T PLN02792 46 GPEIRSLTNDNLVINVHNDL---DEPFLLSWNGVHMRK----NS------------YQDGVYGTTCPIPPGKNYTYDFQV 106 (536)
T ss_pred CCcEEEECCCEEEEEEEeCC---CCCcCEeCCCcccCC----CC------------ccCCCCCCcCccCCCCcEEEEEEe
Confidence 34689999999999999974 378899999987411 00 000000013568999999999998
Q ss_pred -cCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 515 -DNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 515 -dnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
|.+|.|.||||...+...||.+.+.|.+.
T Consensus 107 ~~q~GT~WYHsH~~~q~~~Gl~G~liI~~~ 136 (536)
T PLN02792 107 KDQVGSYFYFPSLAVQKAAGGYGSLRIYSL 136 (536)
T ss_pred CCCccceEEecCcchhhhcccccceEEeCC
Confidence 68999999999999999999999988664
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00041 Score=75.68 Aligned_cols=91 Identities=20% Similarity=0.188 Sum_probs=71.0
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.++++.|+++++.+.|.- ....-+|.||-+..--....| ..- ....|+||+..+.+|++
T Consensus 59 GPtI~~~~GD~v~V~V~N~L---~~~ttIHWHGl~q~~t~w~DG---------------v~~-TQcPI~PG~sftY~F~~ 119 (596)
T PLN00044 59 GPALNVTTNWNLVVNVRNAL---DEPLLLTWHGVQQRKSAWQDG---------------VGG-TNCAIPAGWNWTYQFQV 119 (596)
T ss_pred CCcEEEECCCEEEEEEEeCC---CCCccEEECCccCCCCccccC---------------CCC-CcCCcCCCCcEEEEEEe
Confidence 34588999999999999974 368899999976421111111 111 23568999999999999
Q ss_pred -cCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 515 -DNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 515 -dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
|.+|.+-||+|..++...||...+.|.+++
T Consensus 120 ~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~ 150 (596)
T PLN00044 120 KDQVGSFFYAPSTALHRAAGGYGAITINNRD 150 (596)
T ss_pred CCCCceeEeeccchhhhhCcCeeEEEEcCcc
Confidence 689999999999999999999999998754
|
|
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00061 Score=58.94 Aligned_cols=59 Identities=22% Similarity=0.428 Sum_probs=48.0
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.|+|.+.|.. +.+|.+-++++.+ ...++||+...|+|.++.
T Consensus 62 ~I~VkaGD~Vtl~vtN~d---~~~H~f~i~~~gi----------------------------s~~I~pGet~TitF~adK 110 (135)
T TIGR03096 62 ALVVKKGTPVKVTVENKS---PISEGFSIDAYGI----------------------------SEVIKAGETKTISFKADK 110 (135)
T ss_pred EEEECCCCEEEEEEEeCC---CCccceEECCCCc----------------------------ceEECCCCeEEEEEECCC
Confidence 478999999999999864 3577766665421 345788999999999999
Q ss_pred ceeeEEEeec
Q 008592 517 PGVWFMHCHL 526 (560)
Q Consensus 517 pG~w~~HCHi 526 (560)
||.|.|||-+
T Consensus 111 pG~Y~y~C~~ 120 (135)
T TIGR03096 111 AGAFTIWCQL 120 (135)
T ss_pred CEEEEEeCCC
Confidence 9999999955
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00035 Score=76.09 Aligned_cols=91 Identities=16% Similarity=0.115 Sum_probs=69.5
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.++++.|+++++.+.|.- ...=.+|.||-...--....| ++- --..|+||+..+.+|++
T Consensus 57 GP~I~~~~GD~v~V~v~N~l---~~~ttiHWHGi~q~~~~~~DG---------------v~~-TQcpI~PG~sf~Y~F~~ 117 (552)
T PLN02354 57 GPNINSTSNNNIVINVFNNL---DEPFLLTWSGIQQRKNSWQDG---------------VPG-TNCPIPPGTNFTYHFQP 117 (552)
T ss_pred CCcEEEeCCCEEEEEEEECC---CCCcccccccccCCCCcccCC---------------CcC-CcCCCCCCCcEEEEEEe
Confidence 34689999999999999964 245679999987421110001 111 12468999999999998
Q ss_pred -cCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 515 -DNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 515 -dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+.+|.+.||||...+...||.+.+.|.+++
T Consensus 118 ~~q~GT~WYHsH~~~Q~~~Gl~G~lII~~~~ 148 (552)
T PLN02354 118 KDQIGSYFYYPSTGMHRAAGGFGGLRVNSRL 148 (552)
T ss_pred CCCCcceEEecCccceecCCccceEEEcCCc
Confidence 689999999999999999999999998754
|
|
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0013 Score=60.18 Aligned_cols=103 Identities=17% Similarity=0.128 Sum_probs=73.5
Q ss_pred EEEEECCCCCC-cEEEEecCCEEEEEEEeCCCcCeeEEe--cCcccC--CCcCCCCCC----C-----cCccccCCCCeE
Q 008592 57 SIVTVNGQFPG-PRIIAREGDRLLIRVINNVKYNVTIHW--HGVRQL--RSGWADGPA----Y-----VTQCPIQTGQSY 122 (560)
Q Consensus 57 ~~~~~ng~~pG-P~i~~~~Gd~v~v~~~N~l~~~~~iH~--HG~~~~--~~~~~DGv~----~-----~tq~~i~pG~~~ 122 (560)
..+-|||..-| ++|.+-.|-+|.|+++|....++++-. -+..++ ..-+.||.. | ..-..|.+|++.
T Consensus 74 ~~~nfnGts~G~m~i~VPAGw~V~i~f~N~~~l~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s~ 153 (196)
T PF06525_consen 74 NPFNFNGTSNGQMTIYVPAGWNVQITFTNQESLPHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQSA 153 (196)
T ss_pred CceeeecccCCcEEEEEcCCCEEEEEEEcCCCCCeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCcee
Confidence 47889998888 899999999999999998755544322 222111 122245521 1 122367899998
Q ss_pred EEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCC
Q 008592 123 VYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA 160 (560)
Q Consensus 123 ~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~ 160 (560)
.-.|.. -++|+|||-|-.-++. +||++-|+|...-..
T Consensus 154 ~~~~~~-l~aG~YwlvC~ipGHA~sGMw~~LiVs~~vt~ 191 (196)
T PF06525_consen 154 SGVYND-LPAGYYWLVCGIPGHAESGMWGVLIVSSNVTV 191 (196)
T ss_pred eEEEcc-CCCceEEEEccCCChhhcCCEEEEEEecCccc
Confidence 877753 6799999999998887 899999999876543
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0015 Score=70.92 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=69.5
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.++++.|+++++.+.|.- ...--+|.||-+.. +....|. .+. ---.|+||+.-+.+|++
T Consensus 58 GP~I~~~~GD~v~V~V~N~L---~~~ttiHWHGi~q~----~~~~~DG-----------v~~-tQcpI~PG~sftY~F~~ 118 (543)
T PLN02991 58 GPDIISVTNDNLIINVFNHL---DEPFLISWSGIRNW----RNSYQDG-----------VYG-TTCPIPPGKNYTYALQV 118 (543)
T ss_pred CCcEEEECCCEEEEEecCCC---CCCccEEECCcccC----CCccccC-----------CCC-CCCccCCCCcEEEEEEe
Confidence 34589999999999999963 36778999998831 1000000 011 12468999999999999
Q ss_pred -cCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 515 -DNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 515 -dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+.+|.+-||+|...+...|+...+.|.++.
T Consensus 119 ~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~ 149 (543)
T PLN02991 119 KDQIGSFYYFPSLGFHKAAGGFGAIRISSRP 149 (543)
T ss_pred CCCCcceEEecCcchhhhCCCeeeEEEeCCc
Confidence 689999999999999999999999998653
|
|
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0081 Score=51.70 Aligned_cols=75 Identities=13% Similarity=0.198 Sum_probs=53.2
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
-.|++++||+ |++.|.....++++.-+.. .+ +|.- .....+|++|++.|. ++|+|-|+|-.|. .+|
T Consensus 54 A~v~v~pGDT--Vtw~~~d~~~Hnv~~~~~~---~~--~g~~---~~~~~~~~s~~~Tfe---~~G~Y~Y~C~PH~-~~g 119 (128)
T COG3794 54 AEVTVKPGDT--VTWVNTDSVGHNVTAVGGM---DP--EGSG---TLKAGINESFTHTFE---TPGEYTYYCTPHP-GMG 119 (128)
T ss_pred cEEEECCCCE--EEEEECCCCCceEEEeCCC---Cc--cccc---ccccCCCcceEEEec---ccceEEEEeccCC-CCC
Confidence 4899999999 6678888778888776654 11 2221 133355678877775 4999999987532 379
Q ss_pred ceEeEEEeC
Q 008592 148 LYGPIIILP 156 (560)
Q Consensus 148 l~G~liV~~ 156 (560)
|.|.|+|++
T Consensus 120 M~G~IvV~~ 128 (128)
T COG3794 120 MKGKIVVGE 128 (128)
T ss_pred cEEEEEeCC
Confidence 999999974
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0043 Score=52.81 Aligned_cols=75 Identities=12% Similarity=0.120 Sum_probs=49.0
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEe-cCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHW-HGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~-HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
..|+|++||+|+....|. ++++.+ .+.. -+|... ....+|++++++| +++|+|=|+|-. ...+
T Consensus 15 ~~v~V~~GdTV~f~n~d~---~Hnv~~~~~~~------p~g~~~---~~s~~g~~~~~tF---~~~G~Y~Y~C~p-H~~~ 78 (116)
T TIGR02375 15 AYIRAAPGDTVTFVPTDK---GHNVETIKGMI------PEGAEA---FKSKINEEYTVTV---TEEGVYGVKCTP-HYGM 78 (116)
T ss_pred CEEEECCCCEEEEEECCC---CeeEEEccCCC------cCCccc---ccCCCCCEEEEEe---CCCEEEEEEcCC-CccC
Confidence 689999999977766654 355443 2211 122211 1124577777666 468999999982 2348
Q ss_pred cceEeEEEeCCC
Q 008592 147 TLYGPIIILPKQ 158 (560)
Q Consensus 147 Gl~G~liV~~~~ 158 (560)
||.|.|+|.++.
T Consensus 79 GM~G~V~Vg~~~ 90 (116)
T TIGR02375 79 GMVALIQVGDPP 90 (116)
T ss_pred CCEEEEEECCCC
Confidence 999999998753
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0039 Score=51.74 Aligned_cols=82 Identities=20% Similarity=0.327 Sum_probs=54.4
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|+..+ ...|.+.+=- .+ .....+.... +..-.+..+.+|....+.|. .
T Consensus 18 ~i~V~~G~tV~~~n~~-----~~~Hnv~~~~-------~~---~~~~~~~~~~----~~~~~~~~~~~G~~~~~tF~--~ 76 (99)
T PF00127_consen 18 EITVKAGDTVTFVNND-----SMPHNVVFVA-------DG---MPAGADSDYV----PPGDSSPLLAPGETYSVTFT--K 76 (99)
T ss_dssp EEEEETTEEEEEEEES-----SSSBEEEEET-------TS---SHTTGGHCHH----STTCEEEEBSTTEEEEEEEE--S
T ss_pred EEEECCCCEEEEEECC-----CCCceEEEec-------cc---cccccccccc----CccccceecCCCCEEEEEeC--C
Confidence 4889999999998653 2567665432 11 0000000000 01115667888888777776 8
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
+|.|.|+|- - |...||-..+.|+
T Consensus 77 ~G~y~y~C~-P-H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 77 PGTYEYYCT-P-HYEAGMVGTIIVE 99 (99)
T ss_dssp SEEEEEEET-T-TGGTTSEEEEEEE
T ss_pred CeEEEEEcC-C-CcccCCEEEEEEC
Confidence 999999999 5 9999999999884
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.006 Score=65.94 Aligned_cols=78 Identities=17% Similarity=0.346 Sum_probs=59.0
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.|.+.+.|.....+..|-|-|-++.. -+.+.||....+.|+++.
T Consensus 556 ~i~Vk~GDeVt~~lTN~d~~~DViHGF~Ip~~nI----------------------------~~dv~PG~t~svtF~adk 607 (635)
T PRK02888 556 EFTVKQGDEVTVIVTNLDKVEDLTHGFAIPNYGV----------------------------NMEVAPQATASVTFTADK 607 (635)
T ss_pred eEEecCCCEEEEEEEeCCcccccccceeecccCc----------------------------cEEEcCCceEEEEEEcCC
Confidence 3788999999999999532234678777744432 234668899999999999
Q ss_pred ceeeEEEeechhhh-hcccEEEEEEcC
Q 008592 517 PGVWFMHCHLEVHT-SWGLKMAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~-d~GMm~~~~V~~ 542 (560)
||+|.+||...-|. +.+|...+.|++
T Consensus 608 PGvy~~~CtefCGa~H~~M~G~~iVep 634 (635)
T PRK02888 608 PGVYWYYCTWFCHALHMEMRGRMLVEP 634 (635)
T ss_pred CEEEEEECCcccccCcccceEEEEEEe
Confidence 99999999985433 248988888864
|
|
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.014 Score=49.56 Aligned_cols=73 Identities=14% Similarity=0.184 Sum_probs=49.3
Q ss_pred cEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 68 PRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
..|+|++||+|+ ++|+. ..++++..-+ ... .| .......+|++|+|.|. ++|+|=|+|-.| ...
T Consensus 42 ~~ltV~~GdTVt--w~~~~d~~~HnV~s~~----~~~-f~----s~~~~~~~G~t~s~Tf~---~~G~Y~Y~C~pH-~~~ 106 (115)
T TIGR03102 42 PAIRVDPGTTVV--WEWTGEGGGHNVVSDG----DGD-LD----ESERVSEEGTTYEHTFE---EPGIYLYVCVPH-EAL 106 (115)
T ss_pred CEEEECCCCEEE--EEECCCCCCEEEEECC----CCC-cc----ccccccCCCCEEEEEec---CCcEEEEEccCC-CCC
Confidence 689999999966 66543 4566665321 111 11 01123578999999994 589999999854 336
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
||.|.|+|+
T Consensus 107 gM~G~I~V~ 115 (115)
T TIGR03102 107 GMKGAVVVE 115 (115)
T ss_pred CCEEEEEEC
Confidence 999999984
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.01 Score=49.74 Aligned_cols=61 Identities=13% Similarity=0.318 Sum_probs=41.2
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.+.+++.|.+. ..|-|.+-+.. -...+++|+...+.|.++.
T Consensus 36 ~i~v~~G~~v~l~~~N~~~---~~h~~~i~~~~----------------------------~~~~l~~g~~~~~~f~~~~ 84 (104)
T PF13473_consen 36 TITVKAGQPVTLTFTNNDS---RPHEFVIPDLG----------------------------ISKVLPPGETATVTFTPLK 84 (104)
T ss_dssp EEEEETTCEEEEEEEE-SS---S-EEEEEGGGT----------------------------EEEEE-TT-EEEEEEEE-S
T ss_pred EEEEcCCCeEEEEEEECCC---CcEEEEECCCc----------------------------eEEEECCCCEEEEEEcCCC
Confidence 5899999999999999652 44555555411 1367889999999999999
Q ss_pred ceeeEEEeechh
Q 008592 517 PGVWFMHCHLEV 528 (560)
Q Consensus 517 pG~w~~HCHil~ 528 (560)
||.|-|+|-+-.
T Consensus 85 ~G~y~~~C~~~~ 96 (104)
T PF13473_consen 85 PGEYEFYCTMHP 96 (104)
T ss_dssp -EEEEEB-SSS-
T ss_pred CEEEEEEcCCCC
Confidence 999999999443
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.027 Score=61.08 Aligned_cols=91 Identities=18% Similarity=0.194 Sum_probs=70.1
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.+.+..|+++.+.+.|.. ..+=-+|.||-+..=-.-. |+..=-.-.|+||+..+.+|+.
T Consensus 58 GP~I~~~~gD~ivV~v~N~~---~~~~sihWhGv~q~kn~w~----------------DG~~~TqCPI~Pg~~~tY~F~v 118 (563)
T KOG1263|consen 58 GPTINAEEGDTIVVNVVNRL---DEPFSIHWHGVRQRKNPWQ----------------DGVYITQCPIQPGENFTYRFTV 118 (563)
T ss_pred CCeEEEEeCCEEEEEEEeCC---CCceEEEeccccccCCccc----------------cCCccccCCcCCCCeEEEEEEe
Confidence 44688899999999999973 3677899999875221111 1111112368899999999999
Q ss_pred c-CceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 515 D-NPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 515 d-npG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+ ..|.|.||-|..+|-+.||.+.|.|.+..
T Consensus 119 ~~q~GT~~yh~h~~~~Ra~G~~G~liI~~~~ 149 (563)
T KOG1263|consen 119 KDQIGTLWYHSHVSWQRATGVFGALIINPRP 149 (563)
T ss_pred CCcceeEEEeeccccccccCceeEEEEcCCc
Confidence 5 99999999999999999999999997754
|
|
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.029 Score=48.23 Aligned_cols=72 Identities=15% Similarity=0.243 Sum_probs=50.5
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ..+|.+.+.+... + ..+ -..+.+|....+.|..
T Consensus 48 ~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~---------~--------------~~~-~~~~~pg~t~~~tF~~-- 96 (119)
T PRK02710 48 TLTIKAGDTVKWV--NNK---LAPHNAVFDGAKE---------L--------------SHK-DLAFAPGESWEETFSE-- 96 (119)
T ss_pred EEEEcCCCEEEEE--ECC---CCCceEEecCCcc---------c--------------ccc-ccccCCCCEEEEEecC--
Confidence 3788999999986 422 3688876542210 0 001 2346788877766665
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|+|= .|...||-..+.|+
T Consensus 97 ~G~y~y~C~--~H~~~gM~G~I~V~ 119 (119)
T PRK02710 97 AGTYTYYCE--PHRGAGMVGKITVE 119 (119)
T ss_pred CEEEEEEcC--CCccCCcEEEEEEC
Confidence 999999997 89999999999883
|
|
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.034 Score=48.91 Aligned_cols=93 Identities=13% Similarity=0.136 Sum_probs=63.4
Q ss_pred EEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCc
Q 008592 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517 (560)
Q Consensus 438 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 517 (560)
+.++.|++++.++.|.+. .-|=|=+= ++.... +.+.......+ ..-.-..++.+.||....+-+.+.++
T Consensus 65 ~~v~aG~tv~~v~~n~~e---l~hef~~~---~~~~~~--~~~~~~~~~~D---me~d~~~~v~L~PG~s~elvv~ft~~ 133 (158)
T COG4454 65 FEVKAGETVRFVLKNEGE---LKHEFTMD---APDKNL--EHVTHMILADD---MEHDDPNTVTLAPGKSGELVVVFTGA 133 (158)
T ss_pred ccccCCcEEeeeecCccc---ceEEEecc---Cccccc--hhHHHhhhCCc---cccCCcceeEeCCCCcEEEEEEecCC
Confidence 677889999999999653 34443332 111111 00000000000 11123458999999999999999999
Q ss_pred eeeEEEeechhhhhcccEEEEEEc
Q 008592 518 GVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 518 G~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
|.|-|-|-|-+|-++||-..|.|.
T Consensus 134 g~ye~~C~iPGHy~AGM~g~itV~ 157 (158)
T COG4454 134 GKYEFACNIPGHYEAGMVGEITVS 157 (158)
T ss_pred ccEEEEecCCCcccCCcEEEEEeC
Confidence 999999999999999999999885
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.14 Score=43.58 Aligned_cols=36 Identities=19% Similarity=0.232 Sum_probs=29.8
Q ss_pred CCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 504 SGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 504 p~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
++.. +.++++.+|.|-|+|= .|...||-..+.|.++
T Consensus 54 ~g~~--~~~tF~~~G~Y~Y~C~--pH~~~GM~G~V~Vg~~ 89 (116)
T TIGR02375 54 INEE--YTVTVTEEGVYGVKCT--PHYGMGMVALIQVGDP 89 (116)
T ss_pred CCCE--EEEEeCCCEEEEEEcC--CCccCCCEEEEEECCC
Confidence 4444 4455578999999998 9999999999999875
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.43 Score=37.98 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=44.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|+ |.. ...|-++++...+ +.. .+. ...+.++... +++++.
T Consensus 12 ~i~v~~GdtVt~~--N~d---~~~Hnv~~~~g~~-------~~~--------------~~~-~~~~~~g~~~--~~tf~~ 62 (83)
T TIGR02657 12 ELHVKVGDTVTWI--NRE---AMPHNVHFVAGVL-------GEA--------------ALK-GPMMKKEQAY--SLTFTE 62 (83)
T ss_pred EEEECCCCEEEEE--ECC---CCCccEEecCCCC-------ccc--------------ccc-ccccCCCCEE--EEECCC
Confidence 4789999999995 432 3678887653221 000 011 1123445444 456688
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||=+ |- +|-..+.|+
T Consensus 63 ~G~y~y~C~~--Hp--~M~G~v~V~ 83 (83)
T TIGR02657 63 AGTYDYHCTP--HP--FMRGKVVVE 83 (83)
T ss_pred CEEEEEEcCC--CC--CCeEEEEEC
Confidence 9999999986 54 588888773
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.71 Score=40.81 Aligned_cols=88 Identities=15% Similarity=0.114 Sum_probs=63.5
Q ss_pred CCCCcEEEEecCCEEEEEEEeCCCc--Cee---------EEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccC
Q 008592 64 QFPGPRIIAREGDRLLIRVINNVKY--NVT---------IHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQR 132 (560)
Q Consensus 64 ~~pGP~i~~~~Gd~v~v~~~N~l~~--~~~---------iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~ 132 (560)
.+++-.+.++.|++++..+.|...- ..+ .--|..... .+++- ......+.||++-+..|.. .++
T Consensus 59 ~f~p~~~~v~aG~tv~~v~~n~~el~hef~~~~~~~~~~~~~~~~~~~---Dme~d-~~~~v~L~PG~s~elvv~f-t~~ 133 (158)
T COG4454 59 SFKPSSFEVKAGETVRFVLKNEGELKHEFTMDAPDKNLEHVTHMILAD---DMEHD-DPNTVTLAPGKSGELVVVF-TGA 133 (158)
T ss_pred ccCCCcccccCCcEEeeeecCcccceEEEeccCccccchhHHHhhhCC---ccccC-CcceeEeCCCCcEEEEEEe-cCC
Confidence 4567789999999999999997631 111 112333322 13332 1223668999999999998 679
Q ss_pred cceeEeecccccc-ccceEeEEEeC
Q 008592 133 GTLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 133 Gt~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
|.|=+-|-.-+.+ +||.|-|.|.+
T Consensus 134 g~ye~~C~iPGHy~AGM~g~itV~p 158 (158)
T COG4454 134 GKYEFACNIPGHYEAGMVGEITVSP 158 (158)
T ss_pred ccEEEEecCCCcccCCcEEEEEeCC
Confidence 9999999999988 89999998864
|
|
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.57 Score=39.81 Aligned_cols=73 Identities=21% Similarity=0.348 Sum_probs=47.5
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|+.+.. ...|-.. +.+.+.|+. ......+|+...+.| +.
T Consensus 43 ~ltV~~GdTVtw~~~~d----~~~HnV~---------s~~~~~f~s---------------~~~~~~~G~t~s~Tf--~~ 92 (115)
T TIGR03102 43 AIRVDPGTTVVWEWTGE----GGGHNVV---------SDGDGDLDE---------------SERVSEEGTTYEHTF--EE 92 (115)
T ss_pred EEEECCCCEEEEEECCC----CCCEEEE---------ECCCCCccc---------------cccccCCCCEEEEEe--cC
Confidence 47899999999975431 2455543 222222221 011234555555544 78
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|+|= .|...||-..+.|+
T Consensus 93 ~G~Y~Y~C~--pH~~~gM~G~I~V~ 115 (115)
T TIGR03102 93 PGIYLYVCV--PHEALGMKGAVVVE 115 (115)
T ss_pred CcEEEEEcc--CCCCCCCEEEEEEC
Confidence 999999998 89999999999884
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.89 Score=39.02 Aligned_cols=73 Identities=11% Similarity=0.162 Sum_probs=50.1
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR 145 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~ 145 (560)
.+.|.+..|++|++++++. +.-+++...++.. +.-+-||+.....|++ +++|+|++.|.- -|..
T Consensus 45 ~~~l~lp~g~~v~~~ltS~-DViHsf~ip~~~~-------------k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~g 109 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSE-DVIHSFWIPELGI-------------KMDAIPGRTNSVTFTP-DKPGTYYGQCAEYCGAG 109 (120)
T ss_dssp SSEEEEETTSEEEEEEEES-SS-EEEEETTCTE-------------EEEEBTTCEEEEEEEE-SSSEEEEEEE-SSSSTT
T ss_pred cceecccccceEeEEEEcC-CccccccccccCc-------------ccccccccceeeeeee-ccCCcEEEcCccccCcC
Confidence 3789999999999999995 3333443333322 2345789999999997 899999999984 2222
Q ss_pred -ccceEeEEE
Q 008592 146 -ATLYGPIII 154 (560)
Q Consensus 146 -~Gl~G~liV 154 (560)
+.|.|-++|
T Consensus 110 H~~M~~~v~V 119 (120)
T PF00116_consen 110 HSFMPGKVIV 119 (120)
T ss_dssp GGG-EEEEEE
T ss_pred cCCCeEEEEE
Confidence 567776665
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=91.34 E-value=1.1 Score=38.22 Aligned_cols=87 Identities=15% Similarity=0.140 Sum_probs=54.5
Q ss_pred cEEEEecC-CEEEEEEEeCCCcCeeEEecCcccCCCcCCC---------C-----CCC----c--CccccCCCCeEEEEE
Q 008592 68 PRIIAREG-DRLLIRVINNVKYNVTIHWHGVRQLRSGWAD---------G-----PAY----V--TQCPIQTGQSYVYNF 126 (560)
Q Consensus 68 P~i~~~~G-d~v~v~~~N~l~~~~~iH~HG~~~~~~~~~D---------G-----v~~----~--tq~~i~pG~~~~Y~~ 126 (560)
..|.|..+ .+|.|+|.|....+-..--|-+-......++ | +|. | .-.-|.|||+.+.+|
T Consensus 16 ~~i~V~a~~k~vtv~l~h~G~lpk~~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~svtF 95 (125)
T TIGR02695 16 KSISVPKSCKEFTVNLKHTGKLPKAVMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKTSVTF 95 (125)
T ss_pred cEEEEcCCCcEEEEEEecCCcCchhccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceEEEEE
Confidence 58999984 7999999998543322222211110000011 1 211 0 112378999999999
Q ss_pred EEcc-cCcc-eeEeeccccccccceEeEEE
Q 008592 127 TVTG-QRGT-LFWHAHISWLRATLYGPIII 154 (560)
Q Consensus 127 ~~~~-~~Gt-~wYH~H~~~~~~Gl~G~liV 154 (560)
+++. ++|+ |-|-|-+-+....|.|.|.+
T Consensus 96 ~~~~l~~g~~Y~f~CSFPGH~~~MkG~l~l 125 (125)
T TIGR02695 96 DVSKLSAGEDYTFFCSFPGHWAMMRGTVKL 125 (125)
T ss_pred ECCCCCCCCcceEEEcCCCcHHhceEEEeC
Confidence 9852 6886 99999998888889888753
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=90.88 E-value=2.8 Score=35.92 Aligned_cols=74 Identities=18% Similarity=0.268 Sum_probs=54.2
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.+.++.|+.|.+.+.+. +..|.|.+-....+ +.+.||....+.|.+
T Consensus 45 ~~~l~lp~g~~v~~~ltS~----DViHsf~ip~~~~k----------------------------~d~~PG~~~~~~~~~ 92 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSE----DVIHSFWIPELGIK----------------------------MDAIPGRTNSVTFTP 92 (120)
T ss_dssp SSEEEEETTSEEEEEEEES----SS-EEEEETTCTEE----------------------------EEEBTTCEEEEEEEE
T ss_pred cceecccccceEeEEEEcC----CccccccccccCcc----------------------------cccccccceeeeeee
Confidence 3458999999999999985 36888888765543 345678888999999
Q ss_pred cCceeeEEEeechhhhh-cccEEEEEE
Q 008592 515 DNPGVWFMHCHLEVHTS-WGLKMAWIV 540 (560)
Q Consensus 515 dnpG~w~~HCHil~H~d-~GMm~~~~V 540 (560)
+.||.|-..|..+=... .-|...+.|
T Consensus 93 ~~~G~y~~~C~e~CG~gH~~M~~~v~V 119 (120)
T PF00116_consen 93 DKPGTYYGQCAEYCGAGHSFMPGKVIV 119 (120)
T ss_dssp SSSEEEEEEE-SSSSTTGGG-EEEEEE
T ss_pred ccCCcEEEcCccccCcCcCCCeEEEEE
Confidence 99999999999876443 445455544
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional | Back alignment and domain information |
|---|
Probab=89.50 E-value=3.9 Score=42.24 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=52.5
Q ss_pred CCCcEEEEecCCEEEEEEEeCCCcCeeEEec-CcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccc
Q 008592 65 FPGPRIIAREGDRLLIRVINNVKYNVTIHWH-GVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW 143 (560)
Q Consensus 65 ~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~H-G~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~ 143 (560)
+--..+.+..|+ +.+.|+|....++.+-.- |..+.. ..-.|.||.+.++.+++ .+|+|=|+|-.+
T Consensus 41 c~p~~~tVpAG~-~~f~V~N~~~~~~Efe~~~~~~vv~----------e~EnIaPG~s~~l~~~L--~pGtY~~~C~~~- 106 (375)
T PRK10378 41 CEPMTLTVNAGK-TQFIIQNHSQKALEWEILKGVMVVE----------ERENIAPGFSQKMTANL--QPGEYDMTCGLL- 106 (375)
T ss_pred cccCceeeCCCC-EEEEEEeCCCCcceEEeeccccccc----------cccccCCCCceEEEEec--CCceEEeecCcC-
Confidence 333689999996 899999998665432111 111100 11358999999888776 599999999432
Q ss_pred ccccceEeEEEeCCC
Q 008592 144 LRATLYGPIIILPKQ 158 (560)
Q Consensus 144 ~~~Gl~G~liV~~~~ 158 (560)
..+.|.|+|.+..
T Consensus 107 --~~~~g~l~Vtg~~ 119 (375)
T PRK10378 107 --TNPKGKLIVKGEA 119 (375)
T ss_pred --CCCCceEEEeCCC
Confidence 3348899998653
|
|
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=88.94 E-value=3.3 Score=38.32 Aligned_cols=101 Identities=17% Similarity=0.276 Sum_probs=61.2
Q ss_pred CCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCC---CCCCCCC--CCCCCccceeEeCCCCE
Q 008592 433 SGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPN---KDPAKFN--LVDPAERNTVGVPSGGW 507 (560)
Q Consensus 433 ~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~---~~~~~~~--~~~p~~rDTv~vpp~g~ 507 (560)
.+...+.++.|-.|.+.+.|.. .+.| .|-|+..+....+.. .+.+-+. -..+.--..--+.+|..
T Consensus 83 ~G~m~i~VPAGw~V~i~f~N~~---~l~H-------nl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s 152 (196)
T PF06525_consen 83 NGQMTIYVPAGWNVQITFTNQE---SLPH-------NLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQS 152 (196)
T ss_pred CCcEEEEEcCCCEEEEEEEcCC---CCCe-------eEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCce
Confidence 3456789999999999999964 3554 566665432111100 0010000 00010001112335555
Q ss_pred EEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 508 VAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 508 v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
...-+..-.+|.|.|=|=+.-|...||-..+.|-+.
T Consensus 153 ~~~~~~~l~aG~YwlvC~ipGHA~sGMw~~LiVs~~ 188 (196)
T PF06525_consen 153 ASGVYNDLPAGYYWLVCGIPGHAESGMWGVLIVSSN 188 (196)
T ss_pred eeEEEccCCCceEEEEccCCChhhcCCEEEEEEecC
Confidence 555565667999999999999999999999998653
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=88.31 E-value=2 Score=40.55 Aligned_cols=76 Identities=18% Similarity=0.298 Sum_probs=55.6
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
+.+.++.|+.|++.+.+.. ..|.|.+-+... -..+-||....+.|.++
T Consensus 117 ~~l~vp~g~~v~~~~ts~D----V~Hsf~ip~~~~----------------------------k~da~PG~~~~~~~~~~ 164 (201)
T TIGR02866 117 NELVVPAGTPVRLQVTSKD----VIHSFWVPELGG----------------------------KIDAIPGQYNALWFNAD 164 (201)
T ss_pred CEEEEEcCCEEEEEEEeCc----hhhcccccccCc----------------------------eEEecCCcEEEEEEEeC
Confidence 3588999999999998843 456555533221 23355788889999999
Q ss_pred CceeeEEEeechhhh-hcccEEEEEEcCC
Q 008592 516 NPGVWFMHCHLEVHT-SWGLKMAWIVNDG 543 (560)
Q Consensus 516 npG~w~~HCHil~H~-d~GMm~~~~V~~~ 543 (560)
.||.|...|-..-.. +..|...+.|.++
T Consensus 165 ~~G~y~~~c~e~cG~~h~~M~~~v~v~~~ 193 (201)
T TIGR02866 165 EPGVYYGYCAELCGAGHSLMLFKVVVVER 193 (201)
T ss_pred CCEEEEEEehhhCCcCccCCeEEEEEECH
Confidence 999999999984322 3778888888764
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=88.16 E-value=5.3 Score=36.35 Aligned_cols=99 Identities=18% Similarity=0.246 Sum_probs=59.3
Q ss_pred CcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCC-CCC--CCCCCCCCC--CCCCccceeEeCCCCEE
Q 008592 434 GTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGN-FDP--NKDPAKFNL--VDPAERNTVGVPSGGWV 508 (560)
Q Consensus 434 ~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~-~~~--~~~~~~~~~--~~p~~rDTv~vpp~g~v 508 (560)
+...+.++.|-.|.+++.|.. ..+| .+-|+..+... ..+ ..+.+.+++ ..+.--..=-+..|...
T Consensus 83 G~mtIyiPaGw~V~V~f~N~e---~~pH-------nl~iv~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~Gqs~ 152 (195)
T TIGR03094 83 GAMTIYLPAGWNVYVTFTNYE---SLPH-------NLKLLPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSGHSR 152 (195)
T ss_pred CceEEEEeCCCEEEEEEEcCC---CCCc-------cEEEecCCCCCCCccccccCceeEeecccccCcccccccccccee
Confidence 457789999999999999964 3454 44454433110 000 011111110 00000011112345565
Q ss_pred EEEEEecCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 509 AIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 509 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
..-+..--||.+-+=|=+.-|...||-..+.|-.
T Consensus 153 sg~~~~~~~G~YwlvCgipGHAesGMw~~lIVSs 186 (195)
T TIGR03094 153 SGWWNDTSAGKYWLVCGITGHAESGMWAVVIVSS 186 (195)
T ss_pred EEEeccCCCeeEEEEcccCChhhcCcEEEEEEec
Confidence 5666667899999999999999999999998854
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.43 E-value=4 Score=35.26 Aligned_cols=74 Identities=22% Similarity=0.270 Sum_probs=46.4
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.++++.|++|+|+-.. ...|-.+.=+-. .|..-+++...++.....- ++-
T Consensus 55 ~v~v~pGDTVtw~~~d-----~~~Hnv~~~~~~-----------------------~~~g~~~~~~~~~~s~~~T--fe~ 104 (128)
T COG3794 55 EVTVKPGDTVTWVNTD-----SVGHNVTAVGGM-----------------------DPEGSGTLKAGINESFTHT--FET 104 (128)
T ss_pred EEEECCCCEEEEEECC-----CCCceEEEeCCC-----------------------CcccccccccCCCcceEEE--ecc
Confidence 3788999999997542 236655432222 1111223333333444444 455
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
||.|.|.|- .|..+||-..+.|++
T Consensus 105 ~G~Y~Y~C~--PH~~~gM~G~IvV~~ 128 (128)
T COG3794 105 PGEYTYYCT--PHPGMGMKGKIVVGE 128 (128)
T ss_pred cceEEEEec--cCCCCCcEEEEEeCC
Confidence 999999995 699999999998853
|
|
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=82.44 E-value=14 Score=34.74 Aligned_cols=76 Identities=12% Similarity=0.180 Sum_probs=55.5
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..|.+..|++|++++++.. .+ ||..++.- |+ |.-+-||..-+..|++ +++|+|...|.- .|..
T Consensus 117 ~~l~vp~g~~v~~~~ts~D----V~--Hsf~ip~~----~~----k~da~PG~~~~~~~~~-~~~G~y~~~c~e~cG~~h 181 (201)
T TIGR02866 117 NELVVPAGTPVRLQVTSKD----VI--HSFWVPEL----GG----KIDAIPGQYNALWFNA-DEPGVYYGYCAELCGAGH 181 (201)
T ss_pred CEEEEEcCCEEEEEEEeCc----hh--hccccccc----Cc----eEEecCCcEEEEEEEe-CCCEEEEEEehhhCCcCc
Confidence 5899999999999999854 12 66555422 11 2345689988888986 899999988874 3333
Q ss_pred ccceEeEEEeCCC
Q 008592 146 ATLYGPIIILPKQ 158 (560)
Q Consensus 146 ~Gl~G~liV~~~~ 158 (560)
+.|.+-++|.+++
T Consensus 182 ~~M~~~v~v~~~~ 194 (201)
T TIGR02866 182 SLMLFKVVVVERE 194 (201)
T ss_pred cCCeEEEEEECHH
Confidence 7899999988754
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=82.29 E-value=5.7 Score=38.63 Aligned_cols=77 Identities=8% Similarity=0.015 Sum_probs=56.6
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..|.+..|.+|+++++-. +.-+++...++... .-.-||...+..+++ +++|+|.-.|+- .|..
T Consensus 137 n~l~lPv~~~V~f~ltS~-DViHsF~IP~l~~k-------------~d~iPG~~~~~~~~~-~~~G~Y~g~Cae~CG~gH 201 (247)
T COG1622 137 NELVLPVGRPVRFKLTSA-DVIHSFWIPQLGGK-------------IDAIPGMTTELWLTA-NKPGTYRGICAEYCGPGH 201 (247)
T ss_pred ceEEEeCCCeEEEEEEec-hhceeEEecCCCce-------------eeecCCceEEEEEec-CCCeEEEEEcHhhcCCCc
Confidence 889999999999998766 33333333333322 234678888888886 899999999984 4444
Q ss_pred ccceEeEEEeCCCC
Q 008592 146 ATLYGPIIILPKQQ 159 (560)
Q Consensus 146 ~Gl~G~liV~~~~~ 159 (560)
+.|.|.++|.++++
T Consensus 202 ~~M~~~v~vvs~~~ 215 (247)
T COG1622 202 SFMRFKVIVVSQED 215 (247)
T ss_pred ccceEEEEEEcHHH
Confidence 78999999998764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 560 | ||||
| 1aoz_A | 552 | Refined Crystal Structure Of Ascorbate Oxidase At 1 | 4e-55 | ||
| 2hrg_A | 496 | Crystal Structure Of Blue Laccase From Trametes Tro | 2e-42 | ||
| 4a2f_A | 497 | Coriolopsis Gallica Laccase Collected At 12.65 Kev | 1e-41 | ||
| 4a2d_A | 496 | Coriolopsis Gallica Laccase T2 Copper Depleted At P | 1e-41 | ||
| 3t6v_A | 495 | Crystal Structure Of Laccase From Steccherinum Ochr | 6e-40 | ||
| 2xyb_A | 497 | Crystal Structure Of A Fully Functional Laccase Fro | 2e-39 | ||
| 2qt6_A | 498 | Crystal Structure Determination Of A Blue Laccase F | 4e-36 | ||
| 3pps_A | 604 | Crystal Structure Of An Ascomycete Fungal Laccase F | 7e-34 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 3e-33 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 2e-19 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 3e-33 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 3e-19 | ||
| 1zpu_A | 534 | Crystal Structure Of Fet3p, A Multicopper Oxidase T | 6e-33 | ||
| 1v10_A | 521 | Structure Of Rigidoporus Lignosus Laccase From Hemi | 2e-32 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 2e-30 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 3e-10 | ||
| 1kya_A | 499 | Active Laccase From Trametes Versicolor Complexed W | 2e-29 | ||
| 1kya_A | 499 | Active Laccase From Trametes Versicolor Complexed W | 2e-08 | ||
| 3fpx_A | 499 | Native Fungus Laccase From Trametes Hirsuta Length | 5e-28 | ||
| 3fpx_A | 499 | Native Fungus Laccase From Trametes Hirsuta Length | 7e-09 | ||
| 3pxl_A | 499 | Type-2 Cu-Depleted Fungus Laccase From Trametes Hir | 6e-28 | ||
| 3pxl_A | 499 | Type-2 Cu-Depleted Fungus Laccase From Trametes Hir | 7e-09 | ||
| 2h5u_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 5e-27 | ||
| 2h5u_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 4e-09 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 8e-27 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 2e-11 | ||
| 3div_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 3e-26 | ||
| 3div_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 6e-10 | ||
| 2hzh_A | 499 | Crystal Structure Of Laccase From Coriolus Zonatus | 4e-26 | ||
| 2hzh_A | 499 | Crystal Structure Of Laccase From Coriolus Zonatus | 6e-11 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 2e-20 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 4e-12 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 3e-20 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 4e-12 | ||
| 1gw0_A | 559 | Crystal Structure Of Laccase From Melanocarpus Albo | 6e-18 | ||
| 1gw0_A | 559 | Crystal Structure Of Laccase From Melanocarpus Albo | 1e-13 | ||
| 3dkh_A | 559 | L559a Mutant Of Melanocarpus Albomyces Laccase Leng | 7e-18 | ||
| 3dkh_A | 559 | L559a Mutant Of Melanocarpus Albomyces Laccase Leng | 2e-13 | ||
| 2q9o_A | 559 | Near-Atomic Resolution Structure Of A Melanocarpus | 8e-18 | ||
| 2q9o_A | 559 | Near-Atomic Resolution Structure Of A Melanocarpus | 1e-13 | ||
| 3g5w_A | 318 | Crystal Structure Of Blue Copper Oxidase From Nitro | 9e-13 | ||
| 3gdc_A | 288 | Crystal Structure Of Multicopper Oxidase Length = 2 | 5e-10 | ||
| 3zx1_A | 481 | Multicopper Oxidase From Campylobacter Jejuni: A Me | 1e-08 | ||
| 2xu9_A | 439 | Crystal Structure Of Laccase From Thermus Thermophi | 6e-07 | ||
| 3aw5_A | 448 | Structure Of A Multicopper Oxidase From The Hyperth | 8e-06 |
| >pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 | Back alignment and structure |
|
| >pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 | Back alignment and structure |
|
| >pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 | Back alignment and structure |
|
| >pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 | Back alignment and structure |
|
| >pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 | Back alignment and structure |
|
| >pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 | Back alignment and structure |
|
| >pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 | Back alignment and structure |
|
| >pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 | Back alignment and structure |
|
| >pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 | Back alignment and structure |
|
| >pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 | Back alignment and structure |
|
| >pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 | Back alignment and structure |
|
| >pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 | Back alignment and structure |
|
| >pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 | Back alignment and structure |
|
| >pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 | Back alignment and structure |
|
| >pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase Length = 288 | Back alignment and structure |
|
| >pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 | Back alignment and structure |
|
| >pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 | Back alignment and structure |
|
| >pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The Hyperthermophilic Archaeon Pyrobaculum Aerophilum Length = 448 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 560 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 0.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 0.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 0.0 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 0.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 0.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 0.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 0.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 0.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 1e-105 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 1e-07 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 6e-93 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 5e-11 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 6e-52 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 1e-12 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 7e-50 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 6e-04 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 8e-49 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 6e-48 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 1e-44 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 9e-13 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 3e-39 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 8e-30 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 3e-29 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 2e-09 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 1e-28 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 2e-27 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 7e-07 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-25 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-23 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-16 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 4e-10 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 4e-06 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 5e-06 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 2e-24 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 8e-09 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 6e-24 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 3e-08 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 1e-23 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 1e-09 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 3e-23 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 1e-09 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 6e-07 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 8e-23 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 4e-09 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 2e-22 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 1e-08 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 5e-22 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 7e-07 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 6e-16 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 6e-16 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 5e-05 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 4e-15 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 3e-05 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 9e-12 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 9e-04 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 4e-09 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 635 bits (1639), Expect = 0.0
Identities = 154/567 (27%), Positives = 242/567 (42%), Gaps = 74/567 (13%)
Query: 37 TRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWH 95
RHYK+ ++ C ++ +NGQFPGP I A GD +++ + N + V IHWH
Sbjct: 3 IRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWH 62
Query: 96 GVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIII 154
G+ Q + WADG A ++QC I G+++ YNFTV GT F+H H+ R A LYG +I+
Sbjct: 63 GILQRGTPWADGTASISQCAINPGETFFYNFTVD-NPGTFFYHGHLGMQRSAGLYGSLIV 121
Query: 155 LPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAM-QTGGAPNISDAFTINGL----- 208
P Q PF E+ ++ +WW + +NG
Sbjct: 122 DPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDC 180
Query: 209 -----------PGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVE 257
P + + V+P KTY +R+ + L F+I NH L +VE
Sbjct: 181 SIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE 240
Query: 258 TDAVYAK---------------------SKAPNANFLIAARPYATGPASFDNTTTAGVLE 296
D Y + + P+ N+ ++ A P + +L
Sbjct: 241 ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP---NTPPGLTLLN 297
Query: 297 YDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFT 356
Y + LP P P ++D + F+ +I + + P P+K +RR F
Sbjct: 298 YL---PNSVSKLPTS-PPPQTPAWDDFDRSKNFTYRITAAMGSPKP---PVKFNRRIFLL 350
Query: 357 VGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPP 416
Q N + ++N+VS P L A +N + + P
Sbjct: 351 ------------NTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLL-HAFDQNPPPEVF 397
Query: 417 FKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSII---VAESHPLHLHGFNFFVV 473
+ TPP+N G V V+V++Q+ +++ ++E+HP HLHG +F+V+
Sbjct: 398 PEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVL 457
Query: 474 AQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWG 533
G G F + + NL +P RNTV + GW AIRF+ADNPGVW HCH+E H G
Sbjct: 458 GYGDGKFSAE-EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMG 516
Query: 534 LKMAWIVNDGKGPKQKLPPPPSDLPKC 560
+ + + +K+ P+ C
Sbjct: 517 MGVVFAEGV-----EKVGRIPTKALAC 538
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 578 bits (1491), Expect = 0.0
Identities = 139/573 (24%), Positives = 209/573 (36%), Gaps = 99/573 (17%)
Query: 14 ATFLGFFALWILSELALAKHEGITRHYKFHIKMQNIT-RLCQTKSIVTVNGQFPGPRIIA 72
+F +L +LS +L+ T HI N+ +S VT G P I
Sbjct: 2 PSFASLKSLVVLSLTSLS--LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITG 59
Query: 73 REGDRLLIRVINNV-----KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFT 127
DR I VI+ + + +IHWHG Q + DGPA+V QCPI +S+VY+F
Sbjct: 60 NIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFV 119
Query: 128 VTGQRGTLFWHAHISWLRA-TLYGPIIIL-PKQQASYPFPQPFEEVPIIFGEWWKADTET 185
V GQ GT ++H+H+S L G ++ P + I +W+ + +
Sbjct: 120 VPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179
Query: 186 IINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELF 245
+ AP D INGL N +A + V GK Y R+++ +
Sbjct: 180 LFPNP---NKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYA 236
Query: 246 FSIANHTLTIVETDAVYAKS--------------------KAPNANFLIAARPYATGPAS 285
FSI H +T++E D V + N+ I A P G
Sbjct: 237 FSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS-NGRNG 295
Query: 286 FDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAK- 344
F + + Y A P + + + L P
Sbjct: 296 FTGGINSAIFRYQ-------------GAAVAEPTTSQNSGTALNEANLIPLINPGAPGNP 342
Query: 345 VPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSK 404
VP D + G N T ++N F+ P V +L
Sbjct: 343 VPGGADINLNLRI--------------GRNATTADFTINGAPFIPPTVPVLLQILSG--- 385
Query: 405 GVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLH 464
T P++++ G V+ LP N +E+ + +HP H
Sbjct: 386 ------------------VTNPNDLLP--GGAVISLPANQVIEISIPGG-----GNHPFH 420
Query: 465 LHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGG-WVAIRFLADNPGVWFMH 523
LHG NF VV + +N V+P R+ V + GG V RF+ DNPG WF+H
Sbjct: 421 LHGHNFDVVRTP--------GSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLH 472
Query: 524 CHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSD 556
CH++ H GL + + + P P D
Sbjct: 473 CHIDWHLEAGLAVVFAEDIPNIPIANAISPAWD 505
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 552 bits (1425), Expect = 0.0
Identities = 141/557 (25%), Positives = 212/557 (38%), Gaps = 100/557 (17%)
Query: 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNV-----KYN 89
+ I ++ ++ V VNG PGP + GDR + VI+N+ +
Sbjct: 1 AVGPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKS 60
Query: 90 VTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-L 148
+IHWHG Q + WADGPA++ QCPI G S++Y+F V Q GT ++H+H+S L
Sbjct: 61 TSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGL 120
Query: 149 YGPIIIL-PKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTING 207
GP ++ P + + ++ I +W+ A P +DA ING
Sbjct: 121 RGPFVVYDPNDPHASRYDVDNDDTVITLADWYH-------TAAKLGPRFPGGADATLING 173
Query: 208 LPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS-- 265
G + + + +KVT GK Y R+++ + N FSI H LTI+E D+V ++
Sbjct: 174 K-GRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232
Query: 266 ------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKN 307
N+ I A P G FD + +L YD +
Sbjct: 233 VDSIQIFAAQRYSFVLDANQAVDNYWIRANPN-FGNVGFDGGINSAILRYDGAPAVE--- 288
Query: 308 LPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFP-AKVPMKVDRRFFFTVGLGLSPCPQ 366
P + N+ + L + P A VD+
Sbjct: 289 -PTTNQTTSVKPLNEVDL--------HPLVSTPVPGAPSSGGVDKAINMAFNF------- 332
Query: 367 NQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPP 426
N + +N SFV P V +L +G
Sbjct: 333 -------NGSN--FFINGASFVPPTVPVLLQI----------------------LSGAQT 361
Query: 427 SNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDP 486
+ ++ V VLP NAS+E+ T+ HP HLHG F VV
Sbjct: 362 AQDLL-PSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA--------GS 412
Query: 487 AKFNLVDPAERNTVGV---PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543
+N +P R+ V +G V IRF +NPG WF+HCH++ H G + D
Sbjct: 413 TVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAE-DT 471
Query: 544 KGPKQKLPPPPSDLPKC 560
K P P + C
Sbjct: 472 PDVKAVNPVPQAWSDLC 488
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 549 bits (1418), Expect = 0.0
Identities = 134/554 (24%), Positives = 204/554 (36%), Gaps = 97/554 (17%)
Query: 36 ITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNV-----KYNV 90
I HI +I + V G FPGP I GD I N + +
Sbjct: 3 IGPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDT 62
Query: 91 TIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LY 149
+IHWHG Q + WADGPA++TQCPI G S+ YNF V G GT ++H+H++ L
Sbjct: 63 SIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLR 122
Query: 150 GPIIIL-PKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGL 208
GP ++ P + + + I +W+ + + G +D+ I+GL
Sbjct: 123 GPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM------GAGGAITADSTLIDGL 176
Query: 209 PGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--- 265
N AA + V GK Y +R+++ + + FSI H +TI+ETD V ++
Sbjct: 177 GRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTV 236
Query: 266 -----------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNL 308
P N+ I A P +G FD + +L YD G TT +
Sbjct: 237 DEIQIFAAQRYSFVLNANQPVGNYWIRANPN-SGGEGFDGGINSAILRYD---GATTADP 292
Query: 309 PLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKV-PMKVDRRFFFTVGLGLSPCPQN 367
+ +T+ L+ P D ++G
Sbjct: 293 VTVASTVHTKCLIETDL--------HPLSRNGVPGNPHQGGADCNLNLSLGFACGN---- 340
Query: 368 QTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPS 427
+N VSF P V +L +
Sbjct: 341 ------------FVINGVSFTPPTVPVLLQICSG-----------------------ANT 365
Query: 428 NIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPA 487
+ V+ LP N+++E+ + + HP HLHG +F V +
Sbjct: 366 AADLLPSGSVISLPSNSTIEIALPAGAA--GGPHPFHLHGHDFAVSESA--------SNS 415
Query: 488 KFNLVDPAERNTVGVPSG-GWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGP 546
N DP R+ V + V IRF DNPG WF+HCH++ H G + + +
Sbjct: 416 TSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTA 475
Query: 547 KQKLPPPPSDLPKC 560
P P + C
Sbjct: 476 SA-NPVPEAWSNLC 488
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 543 bits (1402), Expect = 0.0
Identities = 121/562 (21%), Positives = 193/562 (34%), Gaps = 101/562 (17%)
Query: 37 TRHYKFHIKMQNITRLC-QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHW 94
T + + +++ ++T NGQFP P I +GDR+ I + N + N ++H+
Sbjct: 2 THTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHF 61
Query: 95 HGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIII 154
HG+ Q + DG ++TQCPI G + +YNFTV GT ++H+H + I
Sbjct: 62 HGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFI 121
Query: 155 LPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTG---GAPNISDAFTINGLPGP 211
+ Y + EE+ + EW+ + M GA I +N
Sbjct: 122 IKDDSFPYDYD---EELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTM-- 176
Query: 212 FYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAK------- 264
+V P TYLLR++N +F I +H +T+VE D + +
Sbjct: 177 --------NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDML 228
Query: 265 --------------SKAPNANFLIAARPYATGPA---SFDNTTTAGVLEYDQPNGITTKN 307
+ NF I + T S + Y+
Sbjct: 229 YITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYN--------- 279
Query: 308 LPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQN 367
A LP N + + F + + D V + N
Sbjct: 280 -----KTAALPTQNYVDSIDNFLDDFYL--QPYEKEAIYGEPDHVITVDVVMDNLKNGVN 332
Query: 368 QTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPS 427
A NN+++ P V L + + + +
Sbjct: 333 Y-----------AFFNNITYTAPKVPTLMTVLSSGDQANNSEIYG--------------- 366
Query: 428 NIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQ--------GFGN 479
S T +L + VE+V+ + +HP HLHG F + + G
Sbjct: 367 -----SNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALGEVP 418
Query: 480 FDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWI 539
+ D P R+T+ V IRF ADNPGVWF HCH+E H GL + +
Sbjct: 419 HSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLV 478
Query: 540 VNDGK-GPKQKLPPPPSDLPKC 560
+ + L C
Sbjct: 479 EDPFGIQDAHSQQLSENHLEVC 500
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 538 bits (1389), Expect = 0.0
Identities = 118/562 (20%), Positives = 193/562 (34%), Gaps = 91/562 (16%)
Query: 35 GITRHYKFHIKMQNITRL---CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYN-V 90
G+T+ Y F++ + + ++ +NG GP I+A GD + + VINN+ N
Sbjct: 31 GVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGT 90
Query: 91 TIHWHGVRQLRSGWADGPAYVTQCPIQ-TGQSYVYNFTVTGQRGTLFWHAHISWLRAT-L 148
+IHWHG+ Q + DG VT+CPI G Y + Q GT ++H+H S +
Sbjct: 91 SIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGV 149
Query: 149 YGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGL 208
G I I Y + +++ + +++ AP SD ING
Sbjct: 150 VGTIQINGPASLPYDI----DLGVFPITDYYYRAADDLVHFT--QNNAPPFSDNVLING- 202
Query: 209 PGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--- 265
N + +TPGK + LR++N + + S+ NHT+T++ D V +
Sbjct: 203 TAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTV 262
Query: 266 -----------------KAPNANFLIAARPYA-TGPASFDNTTTAGVLEYDQPNGITTKN 307
N+ N A + Y
Sbjct: 263 DSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYA--------G 314
Query: 308 LPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAK-VPMKVDRRFFFTVGLGLSPCPQ 366
P P + + +R + P + D + L
Sbjct: 315 APGGLPT--DEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL------- 365
Query: 367 NQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPP 426
VN P + TG
Sbjct: 366 ------TGTPLFVWKVNGSDINVD---------------------WGKPIIDYILTGN-- 396
Query: 427 SNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFG-------- 478
++ VS V + ++ D + HP+HLHG +F V+ +
Sbjct: 397 TSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQR 456
Query: 479 -NFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMA 537
FDP D A+ N +P R+T +P+GGW+ + F DNPG W HCH+ H S GL +
Sbjct: 457 FVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVD 516
Query: 538 WIVNDGKGPKQKLPPPPSDLPK 559
++ ++ D +
Sbjct: 517 FLERPADLRQRISQEDEDDFNR 538
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 538 bits (1388), Expect = 0.0
Identities = 148/555 (26%), Positives = 219/555 (39%), Gaps = 87/555 (15%)
Query: 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVT-IH 93
G+TR Y ++ IT T+S +T NG PGP IIA GD L+I V NN+++N T IH
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 94 WHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LYGPI 152
WHG+RQL S DG VTQCPI G + Y F VT Q GT ++H+H S L+GP+
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPL 183
Query: 153 IILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPG-- 210
II A Y E+V +IF + W ++ I + + G P + +NG
Sbjct: 184 IINGPATADYD-----EDVGVIFLQDWAHESVFEIWDTARLGAPPA-LENTLMNGTNTFD 237
Query: 211 -----PFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS 265
F+L G Y LR+IN ++ F+I NHTLT++ D V
Sbjct: 238 CSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297
Query: 266 --------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITT 305
A N+ I T + + G+L YD ++
Sbjct: 298 YTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDS----SS 353
Query: 306 KNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCP 365
P D A + + V
Sbjct: 354 IANPTSVGTTPRGTCEDEPV-------------ASLVPHLALDVG-----------GYSL 389
Query: 366 QNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTP 425
++ ++N+ S + + FN ++ T++ + N
Sbjct: 390 VDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNE-TIFPTEYNVVALEQTNANEE- 447
Query: 426 PSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKD 485
V + + HP+HLHG +FF+VAQ F+ ++
Sbjct: 448 --------------------WVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDES 487
Query: 486 PAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKG 545
PAKFNLV+P R+ +P G++AI F DNPG W +HCH+ H S GL M ++ +
Sbjct: 488 PAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSS- 546
Query: 546 PKQKLPPPPSDLPKC 560
K+ C
Sbjct: 547 IAVKMTDTAIFEDTC 561
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 528 bits (1361), Expect = 0.0
Identities = 127/557 (22%), Positives = 203/557 (36%), Gaps = 102/557 (18%)
Query: 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNV-----KYN 89
+ + N++ T++ + VNG GP I + D + V+N++
Sbjct: 2 IVNSVDTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRP 60
Query: 90 VTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-L 148
+IHWHG+ Q + WADG V QCPI G +++Y FT G GT ++H+H L
Sbjct: 61 TSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGL 120
Query: 149 YGPIIILPKQ-QASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTING 207
GP++I + + + E I +W+ +I DA ING
Sbjct: 121 RGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSI--------QGAAQPDATLING 172
Query: 208 LPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS-- 265
G + A + + V GK Y +R+I+ + + FSI H LTI+E D +
Sbjct: 173 -KGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHT 231
Query: 266 ------------------KAPNANFLIAARPYATGPA---SFDNTTTAGVLEYDQPNGIT 304
P N+ I A+P +F N + +L Y
Sbjct: 232 VDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAG----A 287
Query: 305 TKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPC 364
P + N+ + + A P D F +G
Sbjct: 288 ANADPTTSANPNPAQLNEADLH-------ALIDPAAPGIPTPGAADVNLRFQLGF----- 335
Query: 365 PQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGT 424
+ + ++N ++ P+V L
Sbjct: 336 ---------SGGR--FTINGTAYESPSVPTLLQIMSG---------------------AQ 363
Query: 425 PPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNK 484
++++ + V LP N VE+V+ + HP HLHG F VV
Sbjct: 364 SANDLLPA--GSVYELPRNQVVELVVPAGVL--GGPHPFHLHGHAFSVVRSA-------- 411
Query: 485 DPAKFNLVDPAERNTVGVP-SGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543
+ +N V+P +R+ V + +G V IRF+ DNPG WF HCH+E H GL + + +
Sbjct: 412 GSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMA 471
Query: 544 KGPKQKLPPPPSDLPKC 560
PP C
Sbjct: 472 NTVDA-NNPPVEWAQLC 487
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 318 bits (816), Expect = e-105
Identities = 75/341 (21%), Positives = 120/341 (35%), Gaps = 46/341 (13%)
Query: 37 TRHYKFHIKMQNITRLC-QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWH 95
R + I+ I + NGQ PGP I +EGD +++ V NN TIHWH
Sbjct: 3 EREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWH 62
Query: 96 GVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT----LYGP 151
GV Q + +DG VTQ PI+ G SY Y F + GTL++H H++ ++GP
Sbjct: 63 GVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKAD-RIGTLWYHCHVNVNEHVGVRGMWGP 121
Query: 152 IIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGP 211
+I+ PKQ P + + I+ W++ ++ + G N++D F++N P
Sbjct: 122 LIVDPKQ--PLPIEKRVTKDVIMMMSTWESAV---ADKYGEGGTPMNVADYFSVNAKSFP 176
Query: 212 FYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS------ 265
T L+V G +R A H + + D + S
Sbjct: 177 -------LTQPLRVKKGDVVKIRFFGAGGGIH-AMHSHGHDMLVTHKDGLPLDSPYYADT 228
Query: 266 ---------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPL 310
P V+EYD G+ + +
Sbjct: 229 VLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYD---GVPVDDWYV 285
Query: 311 LKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDR 351
K P + + + F + + R
Sbjct: 286 WKDKDYDP---NFFYSESLKQGYGMFDHDGFKGEFEQRQRR 323
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 25/103 (24%), Positives = 35/103 (33%), Gaps = 16/103 (15%)
Query: 460 SHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGV 519
H +H HG + V + L P +TV V G + ADNPG
Sbjct: 200 IHAMHSHGHDMLVTHKDGLP-----------LDSPYYADTVLVSPGERYDVIIEADNPGR 248
Query: 520 WFMHCHLEVHTSWGLK-----MAWIVNDGKGPKQKLPPPPSDL 557
+ H H++ H + G K + I DG D
Sbjct: 249 FIFHDHVDTHVTAGGKHPGGPITVIEYDGVPVDDWYVWKDKDY 291
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 286 bits (734), Expect = 6e-93
Identities = 62/289 (21%), Positives = 106/289 (36%), Gaps = 42/289 (14%)
Query: 37 TRHYKFHIKMQNITRLCQTK-SIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWH 95
R + I+ I + + NGQ P P I EGD + + V N TIHWH
Sbjct: 2 KREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWH 61
Query: 96 GVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT----LYGP 151
G+ Q + +DG + TQ I+ G ++ Y F GT+++H H++ ++GP
Sbjct: 62 GMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAE-PAGTMWYHCHVNVNEHVTMRGMWGP 120
Query: 152 IIILPKQQASYPFPQPF-EEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPG 210
+I+ PK P + ++ ++ +W + N+ + G ++ D +TIN
Sbjct: 121 LIVEPKN--PLPIEKTVTKDYILMLSDWVSSWA----NKPGEGGIPGDVFDYYTINAKSF 174
Query: 211 PFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS----- 265
P +T ++V G LR+I A + H I D
Sbjct: 175 P-------ETQPIRVKKGDVIRLRLIGAG-DHVHAIHTHGHISQIAFKDGFPLDKPIKGD 226
Query: 266 --------------KAPNAN-FLIAAR-PYATGPASFDNTTTAGVLEYD 298
N ++I T + +EY+
Sbjct: 227 TVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYE 275
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 5e-11
Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 16/102 (15%)
Query: 458 AESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517
H +H HG + + L P + +TV + G + DNP
Sbjct: 197 DHVHAIHTHGHISQIAFKDGFP-----------LDKPIKGDTVLIGPGERYDVILNMDNP 245
Query: 518 GVWFMHCHLEVHTSWGLK-----MAWIVNDGKGPKQKLPPPP 554
G+W +H H++ HT+ G K M I + G
Sbjct: 246 GLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVGIDHPFYVWK 287
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 6e-52
Identities = 57/236 (24%), Positives = 90/236 (38%), Gaps = 34/236 (14%)
Query: 35 GITRHYKFHIKMQNITRLCQTKSIV-TVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIH 93
R + ++ + NG+ PGP + AREGD L I N + TIH
Sbjct: 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIH 91
Query: 94 WHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT----LY 149
+HGV + DG + I GQS+ Y F T GT +H H S L LY
Sbjct: 92 FHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDAT-PFGTHLYHCHQSPLAPHIAKGLY 147
Query: 150 GPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLP 209
G I+ PK+ P +E+ ++ + + ++ +++NGLP
Sbjct: 148 GGFIVEPKE----GRPPADDEMVMVMNGYNTDGGDD--------------NEFYSVNGLP 189
Query: 210 GPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDEL-FFSIANHTLTIVETDAVYAK 264
F + F +KV + + +IN D + F I + T +
Sbjct: 190 FHFMD------FPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTP 239
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 67.5 bits (165), Expect = 1e-12
Identities = 14/82 (17%), Positives = 21/82 (25%), Gaps = 12/82 (14%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPG 518
+ H+HG F G L +T+ G + PG
Sbjct: 217 PINSFHIHGNFFHYYPTGTM------------LTPSEYTDTISQVQGQRGILELRFPYPG 264
Query: 519 VWFMHCHLEVHTSWGLKMAWIV 540
+ H H G + V
Sbjct: 265 KFMFHAHKTEFAELGWMGFFEV 286
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 178 bits (452), Expect = 7e-50
Identities = 96/546 (17%), Positives = 157/546 (28%), Gaps = 111/546 (20%)
Query: 13 RATFLGFFALWILSELALAKHEGITRHYKFHIK--MQNITRLCQTKSIVTVNGQFPGPRI 70
F L L L E H IK + + +T T NG P P+I
Sbjct: 26 PKQFPQGEILKALPLLKNESKEKNIFHATLEIKENHIELIKGKKTL-FYTYNGLVPAPKI 84
Query: 71 IAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTG 130
EGD+L I V N +K TIHWHGV DG PI G+ +Y F +
Sbjct: 85 EVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDG---SPHDPILAGEERIYRFEIPQ 139
Query: 131 QR-GTLFWHAHISWLRAT-----LYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTE 184
GT ++H H + + L G +I K+ A E ++ + +
Sbjct: 140 DSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLK----EKDLMISDLRLDENA 195
Query: 185 TIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDEL 244
I N + + ING P K+ +R+ NA L
Sbjct: 196 QIPNNNLNDWLNGREGEFVLINGQFKP------------KIKLATNERIRIYNATAARYL 243
Query: 245 FFSIANHTLTIVETDAVYAKSKAPNANFLIA----------ARPYATGPASFDNTTTAGV 294
I +V TD + ++ A +
Sbjct: 244 NLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKM 303
Query: 295 LEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFF 354
+ ++PN + N+ L K LP K ++ ++ P + +
Sbjct: 304 MVKEEPNTLFLANINLKKENVELP------------KNLKIFKPSEEPKEFKEIIMSEDH 351
Query: 355 FTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPAN 414
+ + + +N S+
Sbjct: 352 MQMHGMMGKSEGELKIALASM----FLINRKSY--------------------------- 380
Query: 415 PPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVA 474
++ G + N S HP H+HG F +++
Sbjct: 381 --------DLKRIDLSSKLGVVEDWIVINKS------------HMDHPFHIHGTQFELIS 420
Query: 475 QGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGL 534
+ A R+T+ V + +R D G+ HCH+ H G+
Sbjct: 421 SKLNGKVQKAE-------FRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGM 473
Query: 535 KMAWIV 540
M +
Sbjct: 474 -MGNLE 478
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 6e-04
Identities = 18/102 (17%), Positives = 27/102 (26%), Gaps = 13/102 (12%)
Query: 458 AESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517
A L + G F +V G + + L PA R + L D P
Sbjct: 240 ARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFL-SPASR------------VEVLIDAP 286
Query: 518 GVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPK 559
+ + + N L +LPK
Sbjct: 287 KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPK 328
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 8e-49
Identities = 77/505 (15%), Positives = 148/505 (29%), Gaps = 101/505 (20%)
Query: 55 TKSIVTVNGQ-FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQ 113
+ + P II R G R+ + + N + +HWHG + D
Sbjct: 24 EATASGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDV--NWHNDA---HPS 78
Query: 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-----LYGPIIILPKQQASYPFPQPF 168
I G+SY Y+F V + GT +H H L A G +I+ F
Sbjct: 79 FAITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGV 137
Query: 169 EEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPG 228
++P++ + + N A + +A +NG+ + G
Sbjct: 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVKDAVFK-----------LSG 186
Query: 229 KTYLLRMINAALNDELFFSIANHT-----LTIVETDAVYAKSKAPNANFLIAA--RPYAT 281
+Y LR++N + SI + ++ D + +A R
Sbjct: 187 GSYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAER---- 242
Query: 282 GPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKF 341
+ ++ + + ++++
Sbjct: 243 ---------------AE-----------------VVVELGEGVYLLK----------NTP 260
Query: 342 PAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFN 401
+ +++ + G +G ++++ P + +
Sbjct: 261 FDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS 320
Query: 402 RSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESH 461
S +T + + + P VS + N + H
Sbjct: 321 LSGMQWTINGMF-------WNASNPLFEHVSVEGVELWEIVNDK-----------ASMPH 362
Query: 462 PLHLHGFNFFVVA---QGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWV--AIRFLADN 516
P+HLHGF +++ + D D ++TV + G V + F A
Sbjct: 363 PMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKK 422
Query: 517 PGVWFM-HCHLEVHTSWGLKMAWIV 540
G F HCH H G+ M I
Sbjct: 423 RGQLFPFHCHNLEHEDGGM-MINIA 446
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 | Back alignment and structure |
|---|
Score = 174 bits (441), Expect = 6e-48
Identities = 84/526 (15%), Positives = 159/526 (30%), Gaps = 110/526 (20%)
Query: 54 QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQ 113
+ +V +G PGP G ++R INN + ++H HG DG +
Sbjct: 55 GSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFS--RAAFDG---WAE 109
Query: 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-----LYGPIIILPKQQASYPFPQPF 168
+ G Y + TL++H H + A G ++ + + P +
Sbjct: 110 DITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGY 169
Query: 169 E--EVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVT 226
++P+I ++ + D +NG P PF
Sbjct: 170 GEFDIPMILTSKQYTANGNLVTTNGELNSF--WGDVIHVNGQPWPFK-----------NV 216
Query: 227 PGKTYLLRMINAALNDELFFSIANHT-------LTIVETDAVYAKSKAPNANFLIAARPY 279
+ Y R ++AA++ A+ ++ +D+ + A + I+
Sbjct: 217 EPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYIS---- 272
Query: 280 ATGPA-----SFDNTTTAGVLEYDQPNGITTKNLP-LLKPAAILPKFNDTNFVMQFSKKI 333
A FD + AG I +NL + +++T+ VM+F +
Sbjct: 273 ---MAERYEVVFDFSDYAG-------KTIELRNLGGSIGGIGTDTDYDNTDKVMRF--VV 320
Query: 334 RSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVA 393
T + VP + F + P+ T ++N V+F
Sbjct: 321 ADDTTQPDTSVVPANLRDVPFPSPTTNT---PRQFRFGRTGPT---WTINGVAFADVQNR 374
Query: 394 LLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDT 453
LL V GT E++
Sbjct: 375 LL---------------------------------ANVPVGTVER-------WELINAGN 394
Query: 454 SIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIR-F 512
+HP+H+H +F V+++ + + ++ V + V +
Sbjct: 395 GW----THPIHIHLVDFKVISR-----TSGNNARTVMPYESGLKDVVWLGRRETVVVEAH 445
Query: 513 LADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLP 558
A PGV+ HCH +H + A+ +
Sbjct: 446 YAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPME 491
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 1e-44
Identities = 52/244 (21%), Positives = 90/244 (36%), Gaps = 25/244 (10%)
Query: 25 LSELALAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVIN 84
E + + +G K + Q +++T G FPGP + R D + + + N
Sbjct: 4 FPEPKVVRSQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLEN 63
Query: 85 NVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQR-GTLFWHAHISW 143
+ +HWHG+ S D P I G+S+ Y FTV + GT ++H H+
Sbjct: 64 RLPEPTNLHWHGLPI--SPKVDDP----FLEIPPGESWTYEFTVPKELAGTFWYHPHLHG 117
Query: 144 LRAT-----LYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPN 198
A L G +++ A P + EE ++ + + M
Sbjct: 118 RVAPQLFAGLLGALVVESSLDA-IPELREAEEHLLVLKDLALQGGRPAPHTPMDWMNGK- 175
Query: 199 ISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVET 258
D +NG P V T LR++NA+ ++ +H L ++
Sbjct: 176 EGDLVLVNGALRPTL-----------VAQKATLRLRLLNASNARYYRLALQDHPLYLIAA 224
Query: 259 DAVY 262
D +
Sbjct: 225 DGGF 228
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 9e-13
Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 12/80 (15%)
Query: 461 HPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVW 520
HP HLH F V++ G F A ++ V + +G + G
Sbjct: 370 HPFHLHVHPFQVLSVGGRPFP-----------YRAWKDVVNLKAGEVARLLVPLREKGRT 418
Query: 521 FMHCHLEVHTSWGLKMAWIV 540
HCH+ H G+ M +
Sbjct: 419 VFHCHIVEHEDRGM-MGVLE 437
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 3e-39
Identities = 71/504 (14%), Positives = 138/504 (27%), Gaps = 67/504 (13%)
Query: 54 QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQ 113
+T + NG GP + + G + + + N + T+HWHG+ G DG Q
Sbjct: 34 KTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEV--PGEVDG---GPQ 88
Query: 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-----LYGPIIILPKQQASYPFPQPF 168
I G V T ++H H L G ++I + P+ +
Sbjct: 89 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQW 148
Query: 169 --EEVPIIFGEWWKADTETII-NEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKV 225
++VP+I + + I + T D NG P +
Sbjct: 149 GIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQH-----------A 197
Query: 226 TPGKTYLLRMINAALNDELFFSIAN-HTLTIVETDAVYAKSKAPNANFLIAARPYATGPA 284
P LR++N L F+ ++ L ++ +D + +
Sbjct: 198 APRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL-------MG 250
Query: 285 -----SFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATA 339
+ P + + + +L++
Sbjct: 251 ERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISAS-GALPDTLSSL 309
Query: 340 KFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHF 399
+ R+ ++ L + + +A ++ +
Sbjct: 310 PALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMN 369
Query: 400 FNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAE 459
+ + F N + G +
Sbjct: 370 HGGKFDFHHANKINGQAFDMN-----KPMFAAAKGQYER-------WVISGVGD----MM 413
Query: 460 SHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGG-WVAIRFLADNP- 517
HP H+HG F ++++ + ++TV V V ++F D P
Sbjct: 414 LHPFHIHGTQFRILSENGKPPAAH---------RAGWKDTVKVEGNVSEVLVKFNHDAPK 464
Query: 518 -GVWFMHCHLEVHTSWGLKMAWIV 540
+ HCHL H G+ M
Sbjct: 465 EHAYMAHCHLLEHEDTGM-MLGFT 487
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 3e-29
Identities = 42/228 (18%), Positives = 87/228 (38%), Gaps = 26/228 (11%)
Query: 57 SIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPI 116
S+ +NG++ GP I +GD + + N + NV++ G++ G G +
Sbjct: 39 SVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQV--PGPLMG---GPARMM 93
Query: 117 QTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-----LYGPIIILPKQQASYPFPQPF--E 169
+ + TL++HA+ A L G ++ + S P P + +
Sbjct: 94 SPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVD 153
Query: 170 EVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGK 229
+ P+I + + T +GG D +NG+ P+ ++V+ G
Sbjct: 154 DFPVIIQDKRLDNFGTPEYNEPGSGGFV--GDTLLVNGVQSPY----------VEVSRGW 201
Query: 230 TYLLRMINAALNDELFFSIAN-HTLTIVETDAVYAKSKAPNANFLIAA 276
LR++NA+ + + + L ++ D + + +A
Sbjct: 202 -VRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAP 248
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 58.8 bits (142), Expect = 2e-09
Identities = 10/83 (12%), Positives = 23/83 (27%), Gaps = 12/83 (14%)
Query: 460 SHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRF--LADNP 517
H+ G F + P D ++TV V + + F +
Sbjct: 366 PQAFHIEGVMFQIRNVNGAMPFPE---------DRGWKDTVWVDGQVELLVYFGQPSWAH 416
Query: 518 GVWFMHCHLEVHTSWGLKMAWIV 540
++ + G + ++
Sbjct: 417 FPFYFNSQTLEMADRGS-IGQLL 438
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 1e-28
Identities = 45/246 (18%), Positives = 80/246 (32%), Gaps = 22/246 (8%)
Query: 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHW 94
I R YK M +T+ + GP + GD LLI N I+
Sbjct: 419 RIGRKYKKVRFMAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYP 478
Query: 95 HGVRQLRS----GWADGPAYVTQCPIQTGQSYVYNFTVTGQRG---------TLFWHAHI 141
HG+ +R G ++ PI G+ + Y +TVT + G T ++ + +
Sbjct: 479 HGITDVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFV 538
Query: 142 SWLR---ATLYGPIIILPKQQAS-----YPFPQPFEEVPIIFGEWWKADTETIINEAMQT 193
+ R + L GP++I K+ + + +F E I +
Sbjct: 539 NMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQRFLPN 598
Query: 194 GGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAAL-NDELFFSIANHT 252
+ D N D+ +L V + +++ D L + +T
Sbjct: 599 PAGVQLEDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYT 658
Query: 253 LTIVET 258
Sbjct: 659 FKHKMV 664
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 2e-27
Identities = 61/526 (11%), Positives = 141/526 (26%), Gaps = 61/526 (11%)
Query: 65 FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQ--------CPI 116
GP I A D ++I + N + V++H GV ++G Y Q +
Sbjct: 72 LLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSY--WKASEGAEYDDQTSQREKEDDKV 129
Query: 117 QTGQSYVYNFTVTGQRG---------TLFWHAHISWLRAT---LYGPIIILPKQQASYPF 164
G S+ Y + V + G T + +H+ ++ L G +++ + +
Sbjct: 130 FPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEK 189
Query: 165 PQPFEEVPIIF-----GEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKD 219
Q + ++F G+ W ++T+ + + A T+NG
Sbjct: 190 TQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNR-------S 242
Query: 220 TFKLKVTPGKTYLLRMINAALNDELF-FSIANHTLTI--VETDAVYAKSKAPNANFLIAA 276
L K+ +I E+ + HT + ++ +
Sbjct: 243 LPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASLEISPITFLTAQTLLM 302
Query: 277 RP--YATGPASFDNTTT--AGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKK 332
+ + ++ D + L + D +
Sbjct: 303 DLGQFLLFCHISSHQHDGMEAYVKVDSCP----EEPQLRMKNNEEAEDYDDDLTDSEMDV 358
Query: 333 IRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNV 392
+R V ++ T ++ ++ P ++
Sbjct: 359 VRFDDDNSPSFIQIRSVAKKHPKTWVHYIAAEEEDWD-YAPLVLAPDDRSYKSQYLNNGP 417
Query: 393 ALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQD 452
+ + YT + + +G + G ++++ N +
Sbjct: 418 QRIGRKYKKVRFMAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQA------- 470
Query: 453 TSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRF 512
+ + ++ HG K K + P E
Sbjct: 471 -----SRPYNIYPHGITDVRPLYSRRLPKGVKHL-KDFPILPGEIFKYKWTVTVEDGPTK 524
Query: 513 LADNPGVWFMHCHLEV--HTSWGLKMAWIVNDGKGPKQKLPPPPSD 556
+ + + + GL ++ + Q+ SD
Sbjct: 525 SDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSD 570
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 51.2 bits (121), Expect = 7e-07
Identities = 9/52 (17%), Positives = 19/52 (36%)
Query: 491 LVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542
+T+ + + +NPG+W + CH + G+ V+
Sbjct: 660 KHKMVYEDTLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVSS 711
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 111 bits (277), Expect = 1e-25
Identities = 39/238 (16%), Positives = 69/238 (28%), Gaps = 42/238 (17%)
Query: 54 QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY--- 110
+T V F GP I A GD++ + + N T H HG+ +G Y
Sbjct: 81 RTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITY--YKEHEGAIYPDN 138
Query: 111 -----VTQCPIQTGQSYVYNFTVT---------GQRGTLFWHAHIS---WLRATLYGPII 153
+ G+ Y Y T G T +H+HI + + L GP+I
Sbjct: 139 TTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLI 198
Query: 154 ILPKQQASYPFPQPF-EEVPIIFGEWWKADTETIINEAMQTGGAPNIS-----------D 201
I K + E ++F + + + + P
Sbjct: 199 ICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNR 258
Query: 202 AFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETD 259
+++NG L + + N+ + H + +
Sbjct: 259 MYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMG-NEVDVHAAFFHGQALTNKN 308
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 105 bits (261), Expect = 1e-23
Identities = 29/221 (13%), Positives = 68/221 (30%), Gaps = 26/221 (11%)
Query: 60 TVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTG 119
+ GP++ A GD++ I N +IH HGV+ T P G
Sbjct: 802 EEHLGILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQT---------ESSTVTPTLPG 852
Query: 120 QSYVYNFTVTGQR---------GTLFWHAHIS---WLRATLYGPIIILPKQQASYPFPQP 167
++ Y + + + +++ + L + L GP+I+ + P+
Sbjct: 853 ETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLKVFNPRR 912
Query: 168 FEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNC----AAKDTFKL 223
E ++F + + ++ + + P + + + + L
Sbjct: 913 KLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRMFGNLQGL 972
Query: 224 KVTPGKTYLLRMINAALNDELF-FSIANHTLTIVETDAVYA 263
+ G ++ +L H+ +
Sbjct: 973 TMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRGVYSS 1013
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 83.1 bits (204), Expect = 1e-16
Identities = 33/235 (14%), Positives = 65/235 (27%), Gaps = 29/235 (12%)
Query: 54 QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVR----------QLRSG 103
+ + + GP I A GD + + N Y ++I GVR
Sbjct: 437 KERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYN 496
Query: 104 WADGPAYVTQCPIQTGQSYVYNFTVTGQRG---------TLFWHAHISWLRAT---LYGP 151
+ + +++ Y +TV + G +++ + + L GP
Sbjct: 497 PQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGP 556
Query: 152 IIILPKQQAS-----YPFPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTIN 206
+ I K + F P +F E E I + D
Sbjct: 557 MKICKKGSLHANGRQKDVDKEFYLFPTVFDENESLLLEDNIRMFTTAPDQVDKEDEDFQE 616
Query: 207 GLPGPFYNCAAKD-TFKLKVTPGKTYLLRMINAALNDELF-FSIANHTLTIVETD 259
N L + G + + + +A ++ + +T
Sbjct: 617 SNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGER 671
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 61.5 bits (148), Expect = 4e-10
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 17/87 (19%)
Query: 461 HPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVW 520
H +H HG +F +G + + G + + PG+W
Sbjct: 994 HTVHFHGHSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGIW 1036
Query: 521 FMHCHLEVHTSWGLKMAWIVNDGKGPK 547
+HCH+ H G++ + V + K
Sbjct: 1037 LLHCHVTDHIHAGMETTYTVLQNEDTK 1063
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 48.8 bits (115), Expect = 4e-06
Identities = 13/98 (13%), Positives = 29/98 (29%), Gaps = 20/98 (20%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPG 518
+ H ++ G + L R+T + + + D G
Sbjct: 654 DVHGIYFSGNTY--------------------LWRGERRDTANLFPQTSLTLHMWPDTEG 693
Query: 519 VWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSD 556
+ + C H + G+K + VN + + +
Sbjct: 694 TFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGE 731
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 48.8 bits (115), Expect = 5e-06
Identities = 12/66 (18%), Positives = 20/66 (30%)
Query: 491 LVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKL 550
+T+ + +A NPG W + C H GL+ + V + K
Sbjct: 305 TNKNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQECNKSSSKD 364
Query: 551 PPPPSD 556
Sbjct: 365 NIRGKH 370
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 2e-24
Identities = 35/192 (18%), Positives = 60/192 (31%), Gaps = 29/192 (15%)
Query: 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHW 94
G RH + + + PGP I EGD L I N + ++H
Sbjct: 5 GEVRH--LKMYAEKLADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHV 62
Query: 95 HGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVT------------GQRGTLFWHAHIS 142
HG+ +DG A + + ++ G + Y + G G +H H+
Sbjct: 63 HGLDY--EISSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVV 119
Query: 143 WLRAT-------LYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQTGG 195
LYGP+I+ K P I+F + + + +
Sbjct: 120 GTEHGTGGIRNGLYGPVIVRRKGD-----VLPDATHTIVFNDMTINNRKPHTGPDFEATV 174
Query: 196 APNISDAFTING 207
+ +G
Sbjct: 175 GDRVEIVMITHG 186
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 8e-09
Identities = 17/101 (16%), Positives = 30/101 (29%), Gaps = 18/101 (17%)
Query: 461 HPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN---P 517
H H+HG + G + + + +A
Sbjct: 190 HTFHMHGHRWADNRTGILTGPDDP---------SRVIDNKITGPADSFGFQIIAGEGVGA 240
Query: 518 GVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLP 558
G W HCH++ H+ G+ ++V K+ P P
Sbjct: 241 GAWMYHCHVQSHSDMGMVGLFLV------KKPDGTIPGYEP 275
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 6e-24
Identities = 36/208 (17%), Positives = 61/208 (29%), Gaps = 25/208 (12%)
Query: 60 TVNGQFPGPRIIAREGDRLLIRVINNVKYNV--TIHWHGVRQLRSGWADGPAYVTQCPIQ 117
+ PG I REGD + + N+ + I H V
Sbjct: 52 SFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT-------GPGGGAESSFTA 104
Query: 118 TGQSYVYNFTVTGQRGTLFWHAH---ISWLRAT-LYGPIIILPKQQASYPFPQPFEEVPI 173
G + +NF G +H + A +YG I++ PK+ E +
Sbjct: 105 PGHTSTFNFKAL-NPGLYIYHCATAPVGMHIANGMYGLILVEPKE----GLAPVDREYYL 159
Query: 174 IFGEWWKADTETIINEAMQTGGAP--NISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTY 231
+ G+++ +D NG G + + L G+T
Sbjct: 160 VQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTTDENS-----LTAKVGETV 214
Query: 232 LLRMINAALNDELFFSIANHTLTIVETD 259
L + N N F + V +
Sbjct: 215 RLYIGNGGPNLVSSFHVIGEIFDTVYVE 242
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 3e-08
Identities = 20/138 (14%), Positives = 36/138 (26%), Gaps = 25/138 (18%)
Query: 419 FNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFG 478
+ T + G V + N H+ G F V G
Sbjct: 198 GSTTDENS--LTAKVGETVRLYIGNGGPN-----------LVSSFHVIGEIFDTVYVE-G 243
Query: 479 NFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAW 538
N + T +P+GG + F + PG + + H +A
Sbjct: 244 GSLKNHN-----------VQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAM 292
Query: 539 IVNDGKGPKQKLPPPPSD 556
+ +G ++
Sbjct: 293 LKVEGPDDHSIFTGKTAE 310
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-23
Identities = 52/274 (18%), Positives = 98/274 (35%), Gaps = 38/274 (13%)
Query: 21 ALWILSELALAKHEGITRHYKFHIK--MQNITRLCQTKSIVTVNGQFPGPRIIAREGDRL 78
AL I L + +Y+ ++ + R + NG FPGP I + + +
Sbjct: 9 ALPIPDTLKPVQQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENV 68
Query: 79 LIRVINN----------------------VKYNVTIHWHGVRQLRSGWADG--PAYVTQC 114
++ +NN + +H HG +DG A+ ++
Sbjct: 69 YVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT--PDDSDGYPEAWFSKD 126
Query: 115 PIQTGQSY---VYNFTVTGQRGTLFWHAHISWLRAT-----LYGPIIILPKQQASYPFPQ 166
QTG + VY++ + L++H H L L G II ++ P
Sbjct: 127 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPS 186
Query: 167 PFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVT 226
+VP++ + + ++ + +P++ + + G K L+V
Sbjct: 187 DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWPYLEVE 246
Query: 227 PGKTYLLRMINAALNDELFFSIAN-HTLTIVETD 259
P K Y R+INA+ S+ N + +D
Sbjct: 247 PRK-YRFRVINASNTRTYNLSLDNGGDFIQIGSD 279
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 59.7 bits (144), Expect = 1e-09
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 461 HPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAE---------RNTVGVPSGGWVAIR 511
HP+HLH +F V+ + + ++ + + PA ++T+ +G + I
Sbjct: 419 HPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIA 478
Query: 512 F-LADNPGVWFMHCHLEVHTSWGLKMAWIV 540
G + HCH H + + M +
Sbjct: 479 ATFGPYSGRYVWHCHALEHEDYDM-MRPMD 507
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 3e-23
Identities = 40/208 (19%), Positives = 67/208 (32%), Gaps = 25/208 (12%)
Query: 60 TVNGQFPGPRIIAREGDRLLIRVIN--NVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQ 117
T NG+ PGP + R GD + + + N + ++ +HG G A TQ
Sbjct: 187 TFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAFTQ--TD 239
Query: 118 TGQSYVYNFTVTGQRGTLFWHAH---ISWLRAT-LYGPIIILPKQQASYPFPQPFEEVPI 173
G+ V F G +H + +YG +++ P+ PQ E +
Sbjct: 240 PGEETVVTFKAL-IPGIYVYHCATPSVPTHITNGMYGLLLVEPEG----GLPQVDREFYV 294
Query: 174 IFGEWWKADTETIINEAMQTGGAP--NISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTY 231
+ GE + + E + F NG G L + G+T
Sbjct: 295 MQGEIYTVKSFGTSGEQEMDYEKLINEKPEYFLFNGSVGSLTRSHP-----LYASVGETV 349
Query: 232 LLRMINAALNDELFFSIANHTLTIVETD 259
+ N F + V +
Sbjct: 350 RIFFGVGGPNFTSSFHVIGEIFDHVYSL 377
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 1e-09
Identities = 34/187 (18%), Positives = 62/187 (33%), Gaps = 26/187 (13%)
Query: 54 QTKSIVTV-----NGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGP 108
+V + P ++ EG+ + + ++N H V D
Sbjct: 36 AEGRMVYIGVGGDIDHKINPTLVVHEGETVQVNLVNG---EGAQHDVVV--------DQY 84
Query: 109 AYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LYGPIIILPKQQASYP---- 163
A + S ++F V + G ++ I+ R + G I +LP +A
Sbjct: 85 AARSAIVNGKNASSTFSF-VASKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGA 143
Query: 164 --FPQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNIS-DAFTING-LPGPFYNCAAKD 219
P + I K + ++ N + +T NG +PGPF D
Sbjct: 144 DITRDPADLPGPIGPRQAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGD 203
Query: 220 TFKLKVT 226
T +L +
Sbjct: 204 TVELHLK 210
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 6e-07
Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 15/99 (15%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERN--TVGVPSGGWVAIRFLADN 516
+ H+ G F V G+ V P TV VP GG + F D
Sbjct: 360 FTSSFHVIGEIFDHVYSL-GSV-----------VSPPLIGVQTVSVPPGGATIVDFKIDR 407
Query: 517 PGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPS 555
G + + H GL + ++ DG + P+
Sbjct: 408 AGRYILVDHALSRLEHGL-VGFLNVDGPKNDSIMHEGPA 445
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 98.3 bits (244), Expect = 8e-23
Identities = 30/211 (14%), Positives = 66/211 (31%), Gaps = 37/211 (17%)
Query: 65 FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLR----SGWADG--PAYVTQCPIQT 118
GP + A GD + + N ++IH G++ + + ++D P +
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 119 GQSYVYNFTVTGQRG---------TLFWHAHISWLR---ATLYGPIII-LPKQQASYPFP 165
GQ Y Y + ++ G T ++++++ + + L GP++I
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQ 176
Query: 166 QPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKV 225
+ FE+ ++ + S +T+NG + V
Sbjct: 177 KMFEKQHVLMFAVFD----------ESKSWNQTSSLMYTVNGYVNG-------TMPDITV 219
Query: 226 TPGKTYLLRMINAALN-DELFFSIANHTLTI 255
+I + + L
Sbjct: 220 CAHDHISWHLIGMSSGPELFSIHFNGQVLEQ 250
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 57.1 bits (137), Expect = 4e-09
Identities = 12/133 (9%), Positives = 34/133 (25%), Gaps = 21/133 (15%)
Query: 410 DFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFN 469
F + + + N V+ + + + + + S E +H +G
Sbjct: 189 VFDESKSWNQTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGP-ELFSIHFNGQV 247
Query: 470 FFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVH 529
+ + + + + S G W + + H
Sbjct: 248 L--------------------EQNHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRH 287
Query: 530 TSWGLKMAWIVND 542
G++ + +
Sbjct: 288 FQAGMQAYIDIKN 300
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 97.8 bits (243), Expect = 2e-22
Identities = 37/205 (18%), Positives = 57/205 (27%), Gaps = 40/205 (19%)
Query: 8 RSAILRATFLG----FFALWILSELALAKHEGIT----------RHYKFHIKMQNITRLC 53
R R LG +L I E+A A + + +
Sbjct: 3 RRGFNRRVLLGGAAAATSLSIAPEVAGAAPAAKGITARTAPAGGEVRHLKMYAEKLADGQ 62
Query: 54 QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQ 113
PGP I EGD L I N + ++H HG+ DG A + +
Sbjct: 63 MGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLD-YEISS-DGTA-MNK 119
Query: 114 CPIQTGQSYVYNFTV------------TGQRGTLFWHAHISWLRAT-------LYGPIII 154
++ G + Y + G G +H H+ LYGP+I+
Sbjct: 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIV 179
Query: 155 LPKQQASYPFPQPFEEVPIIFGEWW 179
K +
Sbjct: 180 RRK----GDVLPDATHTIVFNDMTI 200
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 55.9 bits (134), Expect = 1e-08
Identities = 16/97 (16%), Positives = 28/97 (28%), Gaps = 12/97 (12%)
Query: 461 HPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN---P 517
H H+HG + G + + + +A
Sbjct: 231 HTFHMHGHRWADNRTGILTGPDDP---------SRVIDNKITGPADSFGFQIIAGEGVGA 281
Query: 518 GVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPP 554
G W HCH++ H+ G+ ++V G P
Sbjct: 282 GAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYEPHE 318
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 96.5 bits (240), Expect = 5e-22
Identities = 39/206 (18%), Positives = 67/206 (32%), Gaps = 21/206 (10%)
Query: 60 TVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTG 119
T +G PG I REGD + + NN + H G
Sbjct: 62 TFDGDVPGRMIRVREGDTVEVEFSNNPS-STVPHNVDFH----AATGQGGGAAATFTAPG 116
Query: 120 QSYVYNFTVTGQRGTLFWHAH---ISWLRAT-LYGPIIILPKQQASYPFPQPFEEVPIIF 175
++ ++F Q G +H + A +YG I++ PK+ P+ +E I+
Sbjct: 117 RTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMYGLILVEPKE----GLPKVDKEFYIVQ 171
Query: 176 GEWWKADTETI--INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLL 233
G+++ + + + NG G A LK G+T +
Sbjct: 172 GDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNA-----LKAKAGETVRM 226
Query: 234 RMINAALNDELFFSIANHTLTIVETD 259
+ N N F + V +
Sbjct: 227 YVGNGGPNLVSSFHVIGEIFDKVYVE 252
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 7e-07
Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 16/105 (15%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPG 518
H+ G F V G N++ + VP+GG + F D PG
Sbjct: 235 LVSSFHVIGEIFDKVYVE-GGKLINEN-----------VQSTIVPAGGSAIVEFKVDIPG 282
Query: 519 VWFMHCHLEVHTSWGLKMAWIVNDGKGP----KQKLPPPPSDLPK 559
+ + H + + +G QKL +P+
Sbjct: 283 NYTLVDHSIFRAFNKGALGQLKVEGAENPEIMTQKLSDTAYAVPR 327
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 80.2 bits (197), Expect = 6e-16
Identities = 40/228 (17%), Positives = 78/228 (34%), Gaps = 38/228 (16%)
Query: 60 TVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCP---- 115
+ GP I A D + +R N ++H HG+ +S ++G Y P
Sbjct: 61 EEHLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFK 118
Query: 116 ----IQTGQSYVYNFTVTGQRG---------TLFWHAHISWLRAT---LYGPIIILPKQQ 159
IQ ++Y Y + T + G +++ ++ + L GP++I K
Sbjct: 119 EDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGT 178
Query: 160 ASYPFPQPF--EEVPIIFGEW-----WKADTETIINEAMQTGGAPNISDAFTINGLPGPF 212
P E ++F + W D + + + N + ING+
Sbjct: 179 LDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIY-- 236
Query: 213 YNCAAKDTFKLKVTPGKTYLLRMINAALNDEL-FFSIANHTLTIVETD 259
+ L++ + L ++N + ++ TL T
Sbjct: 237 ------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ 278
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 78.4 bits (193), Expect = 6e-16
Identities = 34/218 (15%), Positives = 67/218 (30%), Gaps = 31/218 (14%)
Query: 60 TVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTG 119
T NG PGP ++ E D + +R+IN + H + + + G
Sbjct: 63 TFNGSVPGPLMVVHENDYVELRLINP---DTNTLLHNID-FHAA-TGALGGGALTQVNPG 117
Query: 120 QSYVYNFTVTGQRGTLFWHAH----ISWLRAT-LYGPIIILPKQQASYPFPQPF---EEV 171
+ F T + G +H + W + + G I++LP+ QP +
Sbjct: 118 EETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIY 176
Query: 172 PIIFGEWWKADTETIINEAMQTGGAP----------NISDAFTINGLPGPFYNCAAKDTF 221
+ +++ E + +T G NG G
Sbjct: 177 YVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALT-----GDH 231
Query: 222 KLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETD 259
L G+ + ++++ N + + V
Sbjct: 232 ALTAAVGER--VLVVHSQANRDTRPHLIGGHGDYVWAT 267
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 17/102 (16%), Positives = 27/102 (26%), Gaps = 18/102 (17%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERN--TVGVPSGGWVAIRFLADN 516
HL G + V G F +P + + T +P G A +
Sbjct: 250 RDTRPHLIGGHGDYVWAT-GKF-----------RNPPDLDQETWLIPGGTAGAAFYTFRQ 297
Query: 517 PGVWFMHCHLEVHTSWGLKMAWIVNDGKGP----KQKLPPPP 554
PGV+ H + G+ + P
Sbjct: 298 PGVYAYVNHNLIEAFELGAAGHFKVTGEWNDDLMTSVVKPAS 339
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 75.6 bits (186), Expect = 4e-15
Identities = 33/205 (16%), Positives = 60/205 (29%), Gaps = 31/205 (15%)
Query: 60 TVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTG 119
T NG PGP ++ EGD + + ++N H V + G
Sbjct: 57 TFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVD-FHGA-TGALGGAKLTNVNPG 111
Query: 120 QSYVYNFTVTGQRGTLFWHAH----ISWLRAT-LYGPIIILPKQQASYPFPQPFEEVPII 174
+ F + GT +H + W + + G +++LP+ P +P
Sbjct: 112 EQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAY 170
Query: 175 F---GEWWKADTETIINEAMQTGGAPN----------ISDAFTINGLPGPFYNCAAKDTF 221
+ + + T NG G A
Sbjct: 171 TIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVG-----ALTGAN 225
Query: 222 KLKVTPGKTYLLRMINAALNDELFF 246
L G+T + +I++ N +
Sbjct: 226 ALTAKVGET--VLLIHSQANRDTRP 248
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 23/101 (22%), Positives = 34/101 (33%), Gaps = 19/101 (18%)
Query: 460 SHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERN--TVGVPSGGWVAIRFLADNP 517
+ P HL G + V + G F +P +R+ T + G A + P
Sbjct: 246 TRP-HLIGGHGDWVWET-GKF-----------ANPPQRDLETWFIRGGSAGAALYTFKQP 292
Query: 518 GVWFMHCHLEVHTSWGLKMAWIVNDGKG----PKQKLPPPP 554
GV+ H + I +GK KQ P P
Sbjct: 293 GVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAP 333
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 | Back alignment and structure |
|---|
Score = 65.7 bits (160), Expect = 9e-12
Identities = 40/221 (18%), Positives = 69/221 (31%), Gaps = 36/221 (16%)
Query: 60 TVNGQFPGPRIIAREGDRLLIRVINNVKYNV--TIHWHGVRQLRSGWADGPAYVTQCPIQ 117
T +G PGP +I EGD + + +IN + + I +H I
Sbjct: 56 TFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT-------GALGGGGLTLIN 108
Query: 118 TGQSYVYNFTVTGQRGTLFWHAH-----ISWLRAT-LYGPIIILPKQQASYPFPQPFEEV 171
G+ V F T + G +H I W + + G I++LP+ +P
Sbjct: 109 PGEKVVLRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYD 167
Query: 172 PIIF-------------GEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAK 218
+ + G + + + E M I NG G A
Sbjct: 168 TVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVG-----ALT 222
Query: 219 DTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETD 259
LK G + +++ N + + +V
Sbjct: 223 GEGALKAKVGDN--VLFVHSQPNRDSRPHLIGGHGDLVWET 261
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 9e-04
Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 18/100 (18%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERN--TVGVPSGGWVAIRFLADN 516
HL G + +V + G F + ER+ T + G A +
Sbjct: 244 RDSRPHLIGGHGDLVWET-GKF-----------HNAPERDLETWFIRGGTAGAALYKFLQ 291
Query: 517 PGVWFMHCHLEVHTSWGLKMAWIVNDGKG----PKQKLPP 552
PGV+ H + A ++ +G+ +Q + P
Sbjct: 292 PGVYAYVNHNLIEAVHKGATAHVLVEGEWDNDLMEQVVAP 331
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 4e-09
Identities = 12/113 (10%), Positives = 33/113 (29%), Gaps = 14/113 (12%)
Query: 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNF 126
GP I A D +++ N + + + A + ++ ++ Y +
Sbjct: 198 GPYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQR--QGAEPRKNFVKPNETKTYFW 255
Query: 127 TVTGQRG---------TLFWHAHISWLRAT---LYGPIIILPKQQASYPFPQP 167
V + + + + L GP+++ + +
Sbjct: 256 KVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQ 308
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 560 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 100.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 100.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 100.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 100.0 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 100.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 100.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 100.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 100.0 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 100.0 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 100.0 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 100.0 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 100.0 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 100.0 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 100.0 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 100.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 100.0 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 100.0 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 100.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 100.0 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 100.0 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 100.0 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 100.0 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 100.0 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 100.0 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 100.0 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.96 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.72 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.56 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.56 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.5 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 99.42 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 99.37 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 99.28 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.27 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.24 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 99.15 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.15 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 99.15 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 99.14 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 98.98 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 98.97 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 98.95 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.93 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 98.88 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.86 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 98.84 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 98.81 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 98.8 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 98.77 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 98.75 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 98.74 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 98.72 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.71 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 98.7 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 98.7 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 98.69 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 98.68 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.66 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 98.66 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 98.65 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.62 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 98.6 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.6 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.57 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 98.55 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.54 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.54 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.51 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 98.51 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 98.49 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 98.46 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.45 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.44 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.42 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.4 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.4 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.36 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 98.35 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 98.3 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 98.3 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.3 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.28 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 98.25 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.25 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 98.21 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 98.2 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.13 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 98.13 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 98.12 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 98.12 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 98.06 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 98.04 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 98.02 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 98.02 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.01 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 97.99 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 97.97 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 97.97 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 97.96 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 97.89 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 97.85 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 97.82 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 97.81 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 97.81 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 97.78 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 97.47 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 97.46 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 97.42 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 97.2 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 97.08 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 96.93 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 96.92 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 96.87 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 96.71 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 96.62 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 96.3 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 96.27 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 96.19 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 96.13 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 96.03 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 95.79 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 95.04 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 94.89 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 94.48 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 94.25 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 93.0 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-95 Score=787.33 Aligned_cols=492 Identities=30% Similarity=0.572 Sum_probs=380.7
Q ss_pred CceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCCcCc
Q 008592 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAYVTQ 113 (560)
Q Consensus 35 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 113 (560)
+++|+|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 36899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHh
Q 008592 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQ 192 (560)
Q Consensus 114 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 192 (560)
|+|+||++|+|+|++ +++||||||||...|+ +||+|+|||++++....+++ .|+|++|+|+||++++..+++.....
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~-~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSC-CSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCC-CCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999998 8999999999998888 89999999999865444442 36899999999999988776644322
Q ss_pred cC-CCCCCCceEEEcCcCCCCCCCC-------------CC-----ceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeE
Q 008592 193 TG-GAPNISDAFTINGLPGPFYNCA-------------AK-----DTFKLKVTPGKTYLLRMINAALNDELFFSIANHTL 253 (560)
Q Consensus 193 ~~-~~~~~~d~~lvNG~~~~~~~~~-------------~~-----~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~ 253 (560)
.. .....+++++|||+.. ++|+ .. ..+.++|++|++|||||||+|..+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1123578999999974 3443 21 12389999999999999999999999999999999
Q ss_pred EEEEeCCCccCC---------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCC
Q 008592 254 TIVETDAVYAKS---------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLK 312 (560)
Q Consensus 254 ~via~DG~~v~p---------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~ 312 (560)
+|||+||++++| ++..++|||++..... ..+.....|+|+|.+..... .+....
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~---~~~~~~~~ail~y~~~~~~~-~p~~~~- 311 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRAR---HPNTPPGLTLLNYLPNSVSK-LPTSPP- 311 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESS---CCCSCCEEEEEEETTSCTTS-CCSSCC-
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccC---CCCCccEEEEEEECCCCCCC-CCCCCC-
Confidence 999999999988 1234667777664321 12345678999998864210 001111
Q ss_pred CCCCCCCCCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCch
Q 008592 313 PAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNV 392 (560)
Q Consensus 313 p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~ 392 (560)
| .++.+++......+ .++.+..+. +...+...++++.+.+..... + ..+.|++|+++|..|+.
T Consensus 312 p--~~p~~~~~~~~~~~--~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~-----------~-~~~~w~iNg~s~~~p~~ 374 (552)
T 1aoz_A 312 P--QTPAWDDFDRSKNF--TYRITAAMG-SPKPPVKFNRRIFLLNTQNVI-----------N-GYVKWAINDVSLALPPT 374 (552)
T ss_dssp C--CCCCTTCHHHHHHH--HTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE-----------T-TEEEEEETTEEECCCSS
T ss_pred C--CCCccccccccccc--cccccccCC-CCCCCCCCcEEEEEEEeeccC-----------C-CeEEEEECCCccCCCCC
Confidence 2 34444443222211 233332221 333455678888777654221 1 24679999999999988
Q ss_pred hhhHHhhccCCCCcccCCCCCCCCc-cccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCc---cCCCceeecCc
Q 008592 393 ALLQAHFFNRSKGVYTTDFPANPPF-KFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIV---AESHPLHLHGF 468 (560)
Q Consensus 393 ~~l~~~~~~~~~g~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~---~~~HP~HlHG~ 468 (560)
++|.+.+.+.+ |.+..+++..++. .|+.+.. ..+...+.++.++.++.|++|||+|+|.+.+. ...||||||||
T Consensus 375 P~L~~~~~~~~-g~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh 452 (552)
T 1aoz_A 375 PYLGAMKYNLL-HAFDQNPPPEVFPEDYDIDTP-PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGH 452 (552)
T ss_dssp CHHHHHHTTCT-TSSCCSCCCSCCCTTCCTTSC-CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTC
T ss_pred CHHHHHhhcCc-cccccCCCccccccccccccc-cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCC
Confidence 98888777655 6665555543221 2333211 11122345677899999999999999976433 56799999999
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCC
Q 008592 469 NFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQ 548 (560)
Q Consensus 469 ~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~ 548 (560)
+||||+++.|.|++ .+...+|+.+|+|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 453 ~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~----- 526 (552)
T 1aoz_A 453 DFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE----- 526 (552)
T ss_dssp CEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----
T ss_pred ceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----
Confidence 99999999898887 445678899999999999999999999999999999999999999999999999987543
Q ss_pred CCCCCCCCCCCC
Q 008592 549 KLPPPPSDLPKC 560 (560)
Q Consensus 549 ~~~~~p~~~~~c 560 (560)
+++++|.++|+|
T Consensus 527 ~~~~~P~~~~~C 538 (552)
T 1aoz_A 527 KVGRIPTKALAC 538 (552)
T ss_dssp GCCCCCHHHHSS
T ss_pred hhccCCcchhhh
Confidence 455688889999
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-92 Score=756.72 Aligned_cols=444 Identities=33% Similarity=0.521 Sum_probs=351.6
Q ss_pred cCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCCcC
Q 008592 34 EGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAYVT 112 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~t 112 (560)
+|++|+|+|++++..+++||.++.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 688999999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred ccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcce-eEEeeeccccChHHHHHHH
Q 008592 113 QCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEV-PIIFGEWWKADTETIINEA 190 (560)
Q Consensus 113 q~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 190 (560)
||+|+||++|+|+|++ .|+||||||||...|+ +||+|+|||+++.+.. +|.|. +|+|+||+++...+++...
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~~-----yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATAD-----YDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSSC-----CSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccCC-----CCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999998 7999999999999888 7999999999876532 37777 9999999999998887655
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCC---------CceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCC
Q 008592 191 MQTGGAPNISDAFTINGLPGPFYNCAA---------KDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAV 261 (560)
Q Consensus 191 ~~~~~~~~~~d~~lvNG~~~~~~~~~~---------~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 261 (560)
... .+..+|+++|||+.. ++|+. ...+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.
T Consensus 218 ~~~--~~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLG--APPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTS--CCCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hcc--CCCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 432 345789999999963 55542 24689999999999999999999999999999999999999999
Q ss_pred ccCC--------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Q 008592 262 YAKS--------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFN 321 (560)
Q Consensus 262 ~v~p--------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~ 321 (560)
+++| ++..++|||++.....+..........|+|+|.+.... .|.. +.+.
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~------~~~~ 363 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTS------VGTT 363 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCC------CCCC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCC------CCCC
Confidence 9988 45668999999876554222334467999999875311 1111 1111
Q ss_pred Cchhhh-hhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccC-CchhhhHHhh
Q 008592 322 DTNFVM-QFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQ-PNVALLQAHF 399 (560)
Q Consensus 322 ~~~~~~-~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~-p~~~~l~~~~ 399 (560)
...... .....|.++ .+..+|...+..+.+.++ .+..+.|++|+++|.. ++.|.|...+
T Consensus 364 ~~~~~~~~~~~~L~P~----~~~~~~~~~~~~~~l~~~---------------~~~~~~w~iN~~s~~~~~~~P~L~~~~ 424 (580)
T 3sqr_A 364 PRGTCEDEPVASLVPH----LALDVGGYSLVDEQVSSA---------------FTNYFTWTINSSSLLLDWSSPTTLKIF 424 (580)
T ss_dssp CCCCSCCSCGGGCCBS----SCCBCCSEEEEEEEEEEE---------------ESSSEEEEETTBCCCCCTTSCHHHHHH
T ss_pred ccchhhcccccccccC----CCCCCCCccceEEEEEec---------------cCCceeEEECCEecccCCCCCchhhhh
Confidence 110000 000122222 122333333444433332 1245789999999975 4667666544
Q ss_pred ccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEe----cCCCEEEEEEeeCCcCccCCCceeecCcceEEEEe
Q 008592 400 FNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVL----PFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQ 475 (560)
Q Consensus 400 ~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~ 475 (560)
.+ . .+|+. ...++.+ +.|++|||+|+|.+. .+..||||||||+||||++
T Consensus 425 ~g----~--~~~~~--------------------~~~~~~~~~~~~~~~~VeiVi~n~~~-~~~~HP~HLHGh~F~vv~~ 477 (580)
T 3sqr_A 425 NN----E--TIFPT--------------------EYNVVALEQTNANEEWVVYVIEDLTG-FGIWHPIHLHGHDFFIVAQ 477 (580)
T ss_dssp TT----C--CCCCG--------------------GGCEEEECC----CCEEEEEEEECSS-SCCCEEEEESSCCEEEEEE
T ss_pred cC----C--ccCCC--------------------CcceeecccccCCCcEEEEEEeCCCc-cccceeeEecCceEEEEec
Confidence 32 1 12211 1234444 469999999999752 2479999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 476 GFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 476 ~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
|.|.|++..+...+|+.||++||||.|+++||++|||++||||+|+|||||+||++.||+++|.+.+.
T Consensus 478 g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 545 (580)
T 3sqr_A 478 ETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQS 545 (580)
T ss_dssp ESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGG
T ss_pred CCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHH
Confidence 99999987767789999999999999999999999999999999999999999999999999987543
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-89 Score=727.07 Aligned_cols=454 Identities=30% Similarity=0.522 Sum_probs=342.3
Q ss_pred eEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCc-----CeeEEecCcccCCCcCCCCCCCc
Q 008592 37 TRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKY-----NVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 37 ~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
-.+|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|||||+++..++|+||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3679999999999999999999999999999999999999999999999984 79999999999999999999999
Q ss_pred CccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCC-CCCCCCCCcceeEEeeeccccChHHHHHH
Q 008592 112 TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA-SYPFPQPFEEVPIIFGEWWKADTETIINE 189 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 189 (560)
|||+|+||++|+|+|++++++||||||||...|+ +||+|+|||+++.+. ...++..++|++|+++||+++...+
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 9999999999999999978999999999999888 899999999987542 1123223567899999999986542
Q ss_pred HHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC----
Q 008592 190 AMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS---- 265 (560)
Q Consensus 190 ~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p---- 265 (560)
.+..+..+|+++|||+.. +..|.....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 159 ---~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 233445789999999952 333334467899999999999999999999999999999999999999999988
Q ss_pred ----------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhh
Q 008592 266 ----------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQF 329 (560)
Q Consensus 266 ----------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 329 (560)
+++.++|||++.....+. .+......|+|+|.+.... .+.. + ..+.... . .
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~----~p~~-~--~~~~~~~---~--~ 301 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV-GFDGGINSAILRYDGAPAV----EPTT-N--QTTSVKP---L--N 301 (499)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSS----CCCC-C--CCCCSSB---C--C
T ss_pred eEEECCCcEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEeCCCCCC----CCCC-C--CCCCCcc---c--c
Confidence 345578999887543332 2333345799999876321 1111 1 0000000 0 0
Q ss_pred cccccccccCCCCC-CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCccc
Q 008592 330 SKKIRSLATAKFPA-KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYT 408 (560)
Q Consensus 330 ~~~l~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~ 408 (560)
...|+++.....|. ..+..+++++.+.+++ ++. .|++|+++|..|+.|.|...+.+ ...
T Consensus 302 ~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~--------------~~~--~w~iNg~s~~~~~~P~L~~~~~g----~~~ 361 (499)
T 3pxl_A 302 EVDLHPLVSTPVPGAPSSGGVDKAINMAFNF--------------NGS--NFFINGASFVPPTVPVLLQILSG----AQT 361 (499)
T ss_dssp GGGCCBSSCCCCSSCSSTTCSSEEEECCEEE--------------CSS--CEEETTBCCCCCSSCHHHHHHTT----CCS
T ss_pred cccccccccccCCCcccCCCCcEEEEEEEEe--------------cCc--EEEEcCEecCCCCCchhhhhhcC----Ccc
Confidence 12344433222221 1234466666555432 112 48999999998888776654432 111
Q ss_pred CCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCC
Q 008592 409 TDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAK 488 (560)
Q Consensus 409 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~ 488 (560)
.. + ......++.++.|++|||+|+|.+....+.||||||||+||||+++ | ...
T Consensus 362 ~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~-g-------~~~ 414 (499)
T 3pxl_A 362 AQ--D-----------------LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA-G-------STV 414 (499)
T ss_dssp TT--T-----------------SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECT-T-------CCC
T ss_pred cc--c-----------------cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEecc-C-------Ccc
Confidence 00 0 1123457899999999999995322346899999999999999864 2 235
Q ss_pred CCCCCCCccceeEeCC---CCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCC-CCCCCCCCCCC
Q 008592 489 FNLVDPAERNTVGVPS---GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQK-LPPPPSDLPKC 560 (560)
Q Consensus 489 ~~~~~p~~rDTv~vpp---~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~-~~~~p~~~~~c 560 (560)
+|+.+|+|||||.|++ |+|++|||++||||.|+|||||+||++.||+++|.+.+ ++ +++ ...|+++...|
T Consensus 415 ~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~-~~-~~~~~~~p~~~~~~C 488 (499)
T 3pxl_A 415 YNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDT-PD-VKAVNPVPQAWSDLC 488 (499)
T ss_dssp CCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESG-GG-HHHHSCCCHHHHTHH
T ss_pred cccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEECh-hH-hccccCCCHHHHHhh
Confidence 7889999999999997 99999999999999999999999999999999996543 22 333 23344444444
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-89 Score=735.77 Aligned_cols=441 Identities=27% Similarity=0.442 Sum_probs=339.8
Q ss_pred ceEEEEEEEEEEEeeecC-ceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCCcCc
Q 008592 36 ITRHYKFHIKMQNITRLC-QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAYVTQ 113 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~~g-~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 113 (560)
++|+|+|+|++..+++|| .++.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHh
Q 008592 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQ 192 (560)
Q Consensus 114 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 192 (560)
|+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++++ ++ .+|+|++|+|+||+++...++...+..
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-p~---~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF-PY---DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC-CS---CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC-CC---CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999966999999999999988 89999999999863 22 347899999999999998887665432
Q ss_pred c---CCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC----
Q 008592 193 T---GGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS---- 265 (560)
Q Consensus 193 ~---~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p---- 265 (560)
. .+....++++||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||++++|
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 12334689999999963 589999999999999999999999999999999999999999988
Q ss_pred ----------------CC-CCceEEEEeccCCCCC---CcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCC-CCCch
Q 008592 266 ----------------KA-PNANFLIAARPYATGP---ASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPK-FNDTN 324 (560)
Q Consensus 266 ----------------~~-~~~~y~i~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~-~~~~~ 324 (560)
++ ..++|||++.....+. .........++|+|.+....+ .+... + .++. ..+
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p--~~~~~-~--~~~~~~~~-- 299 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALP--TQNYV-D--SIDNFLDD-- 299 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBC--CCCCC-S--CSSCSCCG--
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCC--CCCcc-c--cccccccc--
Confidence 11 2357887775432211 112234567999998753210 00000 0 1111 111
Q ss_pred hhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCC
Q 008592 325 FVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSK 404 (560)
Q Consensus 325 ~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~ 404 (560)
..++++. +..++..+++++.+.+.+... .++. ..|++|+++|..|+.+.|...+..
T Consensus 300 ------~~l~p~~----~~~~~~~~~~~~~l~~~~~~~----------~~~~-~~~~iNg~s~~~~~~P~L~~~~~~--- 355 (534)
T 1zpu_A 300 ------FYLQPYE----KEAIYGEPDHVITVDVVMDNL----------KNGV-NYAFFNNITYTAPKVPTLMTVLSS--- 355 (534)
T ss_dssp ------GGCCBSS----CCCCCCSCSEEEEEEEEEEEC----------TTSC-EEEEETTBCCCCCSSCHHHHHTTS---
T ss_pred ------ccceeCC----CCCCCCCCCeEEEEEEEeecc----------CCce-eEEEECCCcccCCCCCceeeeccc---
Confidence 1122221 112334567777776654321 1222 358999999999888766554321
Q ss_pred CcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCC------
Q 008592 405 GVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFG------ 478 (560)
Q Consensus 405 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g------ 478 (560)
+.+. .. +.. ...++.++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+
T Consensus 356 ~~~~----~~-~~~------------~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~ 415 (534)
T 1zpu_A 356 GDQA----NN-SEI------------YGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALG 415 (534)
T ss_dssp GGGT----TC-GGG------------GCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGT
T ss_pred Cccc----CC-Ccc------------cCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCcccccc
Confidence 2211 00 111 122356789999999999999965 479999999999999999864
Q ss_pred ----CCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 479 ----NFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 479 ----~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
.|++.. .. ....+|.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 416 G~p~~~~~~~-~~-~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~ 482 (534)
T 1zpu_A 416 EVPHSFDPDN-HP-AFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPF 482 (534)
T ss_dssp CCCCCCBTTB-CC-CCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred CcccccCccc-cc-cccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcc
Confidence 343321 11 2257899999999999999999999999999999999999999999999988543
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-89 Score=725.48 Aligned_cols=435 Identities=29% Similarity=0.523 Sum_probs=334.4
Q ss_pred EEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCc-----CeeEEecCcccCCCcCCCCCCCcC
Q 008592 38 RHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKY-----NVTIHWHGVRQLRSGWADGPAYVT 112 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~t 112 (560)
.+|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|||||+++.+++|+||++++|
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 679999999999999999999999999999999999999999999999985 799999999999999999999999
Q ss_pred ccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCC-CCCCCCCcceeEEeeeccccChHHHHHHH
Q 008592 113 QCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQAS-YPFPQPFEEVPIIFGEWWKADTETIINEA 190 (560)
Q Consensus 113 q~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 190 (560)
||+|+||++|+|+|++++++||||||||...|+ +||+|+|||+++.+.. .+++..++|++|+++||+++...++
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 999999999999999978999999999999888 8999999999876421 1232235678999999999876532
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCC--CceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC---
Q 008592 191 MQTGGAPNISDAFTINGLPGPFYNCAA--KDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--- 265 (560)
Q Consensus 191 ~~~~~~~~~~d~~lvNG~~~~~~~~~~--~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p--- 265 (560)
.+..+..+|+++|||+.. +.|.. ...+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 161 --~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 236 (495)
T 3t6v_A 161 --GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTV 236 (495)
T ss_dssp --CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred --ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEe
Confidence 233445789999999952 33432 456799999999999999999999999999999999999999999988
Q ss_pred -----------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCC-CCCCchhhh
Q 008592 266 -----------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILP-KFNDTNFVM 327 (560)
Q Consensus 266 -----------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~ 327 (560)
+++.++|||++.....+. .+.+....|+|+|.+.... .+.. + ... .... .
T Consensus 237 ~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~----~p~~-~--~~~~~~~~---~- 304 (495)
T 3t6v_A 237 DEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE-GFDGGINSAILRYDGATTA----DPVT-V--ASTVHTKC---L- 304 (495)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSS----CCCC-C--CCSSCSSB---C-
T ss_pred eeEEEcCceEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEECCCCCC----CCCC-C--CCCCCccc---c-
Confidence 345688999887543332 2333345799999876321 1111 0 000 0000 0
Q ss_pred hhcccccccccCCCCC-CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCc
Q 008592 328 QFSKKIRSLATAKFPA-KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGV 406 (560)
Q Consensus 328 ~~~~~l~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~ 406 (560)
....|+++.....|. ..+..+++++.+.+++ ++. .|++|+++|..|+.|.|...+.+ .
T Consensus 305 -~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~--------------~~~--~w~iNg~s~~~~~~P~L~~~~~g----~ 363 (495)
T 3t6v_A 305 -IETDLHPLSRNGVPGNPHQGGADCNLNLSLGF--------------ACG--NFVINGVSFTPPTVPVLLQICSG----A 363 (495)
T ss_dssp -CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCSSCHHHHHHTT----C
T ss_pred -ccccccccccccCCCccCCCCCcEEEEEEEEe--------------cCc--EEEEcCEecCCCCCcchhhhhcC----C
Confidence 012344432221221 1233456666554432 112 58999999998887766654432 1
Q ss_pred ccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCC
Q 008592 407 YTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDP 486 (560)
Q Consensus 407 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~ 486 (560)
.... + ......++.++.|++|||+|+|. ...+.||||||||+|+||+++. .
T Consensus 364 ~~~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g--------~ 414 (495)
T 3t6v_A 364 NTAA--D-----------------LLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS--------N 414 (495)
T ss_dssp CSST--T-----------------SSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT--------C
T ss_pred cCcc--c-----------------ccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC--------C
Confidence 1100 0 11234578999999999999842 2458999999999999998642 2
Q ss_pred CCCCCCCCCccceeEeCC-CCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 487 AKFNLVDPAERNTVGVPS-GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 487 ~~~~~~~p~~rDTv~vpp-~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
..+|+.+|+|||||.|++ |+|++|||++||||.|+|||||+||++.||+++|.+.+
T Consensus 415 ~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 415 STSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp CCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred CCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 357889999999999997 89999999999999999999999999999999996543
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-89 Score=734.89 Aligned_cols=455 Identities=28% Similarity=0.465 Sum_probs=340.4
Q ss_pred cCceEEEEEEEEEEEeeecCc-eeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-----cCeeEEecCcccCCCcCCCC
Q 008592 34 EGITRHYKFHIKMQNITRLCQ-TKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-----YNVTIHWHGVRQLRSGWADG 107 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~~g~-~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~DG 107 (560)
.+...+|+|++++..+++||. ++.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+.+|+||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 356788999999999999999 999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCC-CCCCCCCCcceeEEeeeccccChHH
Q 008592 108 PAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA-SYPFPQPFEEVPIIFGEWWKADTET 185 (560)
Q Consensus 108 v~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~ 185 (560)
++++|||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. ...++..++|++|+|+||+++...+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 99999999999999999999778999999999999988 799999999987532 1223223469999999999988776
Q ss_pred HHHHHHhcCCCCCCCceEEEcCcCCCCCCCC--CCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCcc
Q 008592 186 IINEAMQTGGAPNISDAFTINGLPGPFYNCA--AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYA 263 (560)
Q Consensus 186 ~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~--~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v 263 (560)
+... .+.....+|+++|||+.. +.|. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||+++
T Consensus 180 ~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 254 (521)
T 1v10_A 180 LFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSH 254 (521)
T ss_dssp ---------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE
T ss_pred Hhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccc
Confidence 5421 122234689999999974 4564 23457999999999999999999999999999999999999999998
Q ss_pred CC--------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCc
Q 008592 264 KS--------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDT 323 (560)
Q Consensus 264 ~p--------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~ 323 (560)
+| ++..++|||++.....+. .+......++|+|.+.... .+.. + .. .....
T Consensus 255 ~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~~----~p~~-~--~~-~~~~~ 325 (521)
T 1v10_A 255 QPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAAVA----EPTT-S--QN-SGTAL 325 (521)
T ss_dssp EEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTCCSC----CCCC-C--CC-CSCBC
T ss_pred cceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc-cCCCCceeEEEEECCCCCC----CCCC-C--CC-ccccc
Confidence 87 234577888876543221 2222234699999876321 1111 1 00 00000
Q ss_pred hhhhhhcccccccccCCCCC-CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccC
Q 008592 324 NFVMQFSKKIRSLATAKFPA-KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNR 402 (560)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~ 402 (560)
. ...+.++...+.+. ..+...+..+.++++. ++..+.|++|+++|..+..+.|.+.+.+
T Consensus 326 ---~--~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~~~~~~iNg~~~~~~~~P~l~~~~~g- 385 (521)
T 1v10_A 326 ---N--EANLIPLINPGAPGNPVPGGADINLNLRIGR--------------NATTADFTINGAPFIPPTVPVLLQILSG- 385 (521)
T ss_dssp ---C--GGGCCBSSCCCCSSCSSTTCSSEEEECCEEC--------------CSSSSCCEESSCCCCCCSSCHHHHHHHT-
T ss_pred ---c--hhhcccCCcccCCCcccCCcceEEEEEEEec--------------CCceeEEEECCCcccCCCCchhhhhhcC-
Confidence 0 01233322111111 1112334444332211 2223468999999998877766554432
Q ss_pred CCCccc-CCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCC
Q 008592 403 SKGVYT-TDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFD 481 (560)
Q Consensus 403 ~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~ 481 (560)
... .+ ...+..++.++.|++|||+++| . +.||||||||+||||+++.+.
T Consensus 386 ---~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~N-~----~~HP~HLHGh~F~Vl~~~~~~-- 435 (521)
T 1v10_A 386 ---VTNPND--------------------LLPGGAVISLPANQVIEISIPG-G----GNHPFHLHGHNFDVVRTPGSS-- 435 (521)
T ss_dssp ---CCCGGG--------------------SSSTTTEEEECTTCEEEEEEEC-C----BSCEEEESSCCEEEEECTTCS--
T ss_pred ---Cccccc--------------------CCCCceEEEecCCCEEEEEEcC-C----CCCCEEEccceEEEEecCCCC--
Confidence 110 01 1124567899999999999998 3 799999999999999997542
Q ss_pred CCCCCCCCCCCCCCccceeEe-CCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCCCCCCC-CCCCC
Q 008592 482 PNKDPAKFNLVDPAERNTVGV-PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPP-SDLPK 559 (560)
Q Consensus 482 ~~~~~~~~~~~~p~~rDTv~v-pp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~ 559 (560)
.+++.+|.|||||.| ++++|++|||++||||.|+|||||+||++.|||++|.|.+.+ ++++.++| .+.+.
T Consensus 436 ------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~ 507 (521)
T 1v10_A 436 ------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN--IPIANAISPAWDDL 507 (521)
T ss_dssp ------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG--HHHHSCCCHHHHTH
T ss_pred ------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc--hhhccCCChHHhhh
Confidence 467889999999999 899999999999999999999999999999999999986543 33444334 56777
Q ss_pred C
Q 008592 560 C 560 (560)
Q Consensus 560 c 560 (560)
|
T Consensus 508 C 508 (521)
T 1v10_A 508 C 508 (521)
T ss_dssp H
T ss_pred c
Confidence 7
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-86 Score=721.82 Aligned_cols=451 Identities=25% Similarity=0.443 Sum_probs=337.9
Q ss_pred ccCceEEEEEEEEEEE--eeecCce-eEEEEECCCCCCcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCC
Q 008592 33 HEGITRHYKFHIKMQN--ITRLCQT-KSIVTVNGQFPGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGP 108 (560)
Q Consensus 33 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv 108 (560)
..+.+++|+|++++.. +.++|.. +.+|+|||++|||+|++++||+|+|+|+|+| +++|+|||||+++.+.+|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4678999999999998 8899999 9999999999999999999999999999999 6899999999999998999999
Q ss_pred CCcCccccCC-CCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcce-eEEeeeccccChHH
Q 008592 109 AYVTQCPIQT-GQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEV-PIIFGEWWKADTET 185 (560)
Q Consensus 109 ~~~tq~~i~p-G~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~ 185 (560)
|++|||+|+| |++|+|+|++ .++||||||||...|+ +||+|+|||++++... +++|. +|+|+||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~-----~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASLP-----YDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSSC-----CSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcCC-----CcccceEEEEeccccCCHHH
Confidence 9999999999 9999999998 7899999999998887 8999999999876532 36777 99999999999887
Q ss_pred HHHHHHhcCCCCCCCceEEEcCcCCCCCCCC-CCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccC
Q 008592 186 IINEAMQTGGAPNISDAFTINGLPGPFYNCA-AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAK 264 (560)
Q Consensus 186 ~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~-~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~ 264 (560)
+..... .+.+..+++++|||+..+ .|. .+..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++
T Consensus 183 ~~~~~~--~~~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~ 258 (559)
T 2q9o_A 183 LVHFTQ--NNAPPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVN 258 (559)
T ss_dssp HHHHHT--TSCCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred Hhhhhh--cCCCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccC
Confidence 754332 223456899999999753 353 234678999999999999999999999999999999999999999988
Q ss_pred C--------------------CCCCceEEEEecc--CCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCC
Q 008592 265 S--------------------KAPNANFLIAARP--YATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFND 322 (560)
Q Consensus 265 p--------------------~~~~~~y~i~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~ 322 (560)
| ++..++|||++.. ...+ .........++|+|.+.... .|.. + ..+. .+
T Consensus 259 p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~-~~~~~~~~~ail~y~~~~~~----~P~~-~--~~~~-~~ 329 (559)
T 2q9o_A 259 AMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAAC-GGSLNPHPAAIFHYAGAPGG----LPTD-E--GTPP-VD 329 (559)
T ss_dssp EEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTT-CCBSSSCCEEEEEETTSCCS----CCCC-C--CCCC-CC
T ss_pred ceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEecccccc-CCCCCCceeEEEEECCCCCC----CCCC-C--CCcC-CC
Confidence 7 3345788888875 2222 12233456899999876321 1111 0 1110 01
Q ss_pred chhhhhhcccccccccCCCCC-CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCC-chhhhHHhhc
Q 008592 323 TNFVMQFSKKIRSLATAKFPA-KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQP-NVALLQAHFF 400 (560)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p-~~~~l~~~~~ 400 (560)
..+... ..+.+......+. ......+..+.+..... .+..+.|++|+++|..+ ..++|...+.
T Consensus 330 ~~~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~iNg~s~~~~~~~P~L~~~~~ 394 (559)
T 2q9o_A 330 HQCLDT--LDVRPVVPRSVPVNSFVKRPDNTLPVALDLT-------------GTPLFVWKVNGSDINVDWGKPIIDYILT 394 (559)
T ss_dssp CTTCCC--SCCCBSSCCBCCCTTCCCCGGGEEEEEEECS-------------SSSSCEEEETTBCCCCCTTSCHHHHHHH
T ss_pred cccccc--cccccCCCCCCCCcccccceeEEEEEEeecC-------------CCceEEEEECCEecccCCCCCcHhHhhc
Confidence 000000 1122211100010 01111223333332210 12345799999999765 4566655443
Q ss_pred cCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecC-CCEEEEEEeeCCc-CccCCCceeecCcceEEEEeCC-
Q 008592 401 NRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPF-NASVEVVMQDTSI-IVAESHPLHLHGFNFFVVAQGF- 477 (560)
Q Consensus 401 ~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ve~~i~N~~~-~~~~~HP~HlHG~~F~Vl~~~~- 477 (560)
+. .+|+ .+..++.++. +++++|+++|... ...+.||||||||+||||+++.
T Consensus 395 g~------~~~~--------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~ 448 (559)
T 2q9o_A 395 GN------TSYP--------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPD 448 (559)
T ss_dssp TC------CCCC--------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCC
T ss_pred CC------ccCC--------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccc
Confidence 21 1121 1244566654 5788888888531 0147999999999999999987
Q ss_pred --------CCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 478 --------GNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 478 --------g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
|.|++..+...+++.+|+|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 449 ~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~ 522 (559)
T 2q9o_A 449 VPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA 522 (559)
T ss_dssp CCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred cccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc
Confidence 666543223567899999999999999999999999999999999999999999999999988654
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-86 Score=710.28 Aligned_cols=448 Identities=29% Similarity=0.521 Sum_probs=335.9
Q ss_pred EEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-----cCeeEEecCcccCCCcCCCCCCCcC
Q 008592 38 RHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-----YNVTIHWHGVRQLRSGWADGPAYVT 112 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~t 112 (560)
.+|+|++++..+++||.++.+|+|||++ ||+|++++||+|+|+|+|+|+ ++|+|||||+++.+.+|+||+|++|
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4799999999999999999999999999 999999999999999999999 9999999999999889999999999
Q ss_pred ccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCC-CCCCCCCCcceeEEeeeccccChHHHHHHH
Q 008592 113 QCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA-SYPFPQPFEEVPIIFGEWWKADTETIINEA 190 (560)
Q Consensus 113 q~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 190 (560)
||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. ..+++..++|++|+|+||+++...++..
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~-- 161 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG-- 161 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC--
Confidence 999999999999999768999999999999988 799999999987532 2223222468999999999988765311
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCC-CceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC----
Q 008592 191 MQTGGAPNISDAFTINGLPGPFYNCAA-KDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS---- 265 (560)
Q Consensus 191 ~~~~~~~~~~d~~lvNG~~~~~~~~~~-~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p---- 265 (560)
...+|+++|||+.. +.|.. ...+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||++++|
T Consensus 162 ------~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 162 ------AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ------CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 13579999999963 56653 345899999999999999999999999999999999999999999887
Q ss_pred ----------------CCCCceEEEEeccCCCCCC---cCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhh
Q 008592 266 ----------------KAPNANFLIAARPYATGPA---SFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFV 326 (560)
Q Consensus 266 ----------------~~~~~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 326 (560)
++..++|||++........ .+......++|+|.+.... .+.. + ..+......
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~----~p~~-~--~~~~~~~l~-- 304 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANA----DPTT-S--ANPNPAQLN-- 304 (503)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSS----CCCC-C--CCSSCCBCC--
T ss_pred eEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCC----CCCC-C--CCCccCCCc--
Confidence 2345778888765422111 1222234699999876321 0111 1 111100000
Q ss_pred hhhcccccccccCCCCC-CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCC
Q 008592 327 MQFSKKIRSLATAKFPA-KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKG 405 (560)
Q Consensus 327 ~~~~~~l~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g 405 (560)
...+.++.....+. ..+...+..+.+.++. ++. .|++|+++|..+..+.|.+.+.+
T Consensus 305 ---~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~--~~~iNg~~~~~~~~P~l~~~~~g---- 361 (503)
T 1hfu_A 305 ---EADLHALIDPAAPGIPTPGAADVNLRFQLGF--------------SGG--RFTINGTAYESPSVPTLLQIMSG---- 361 (503)
T ss_dssp ---GGGCBBSSSCSCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCSSCHHHHHHTT----
T ss_pred ---cccccccCccCCCCcccCCcceEEEEEEeec--------------cCc--eEEECCCccCCCCCcchhhhhcC----
Confidence 01233332111111 1112233333222211 122 58999999998877766654422
Q ss_pred ccc-CCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCC
Q 008592 406 VYT-TDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNK 484 (560)
Q Consensus 406 ~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~ 484 (560)
... .+ ...++.++.++.|++||++++|.. ..+.||||||||+||||+++.+.
T Consensus 362 ~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~----- 414 (503)
T 1hfu_A 362 AQSAND--------------------LLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS----- 414 (503)
T ss_dssp CCSGGG--------------------SSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC-----
T ss_pred Cccccc--------------------CCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC-----
Confidence 110 00 123466789999999999998533 25799999999999999997542
Q ss_pred CCCCCCCCCCCccceeEe-CCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCCCCCCC-CCCCCC
Q 008592 485 DPAKFNLVDPAERNTVGV-PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPP-SDLPKC 560 (560)
Q Consensus 485 ~~~~~~~~~p~~rDTv~v-pp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c 560 (560)
.+++.+|.|||||.| ++++|++|||++||||.|+|||||+||++.|||++|.|.+.+ ++++.++| .+.+.|
T Consensus 415 ---~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 415 ---TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWAQLC 487 (503)
T ss_dssp ---CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHHHHH
T ss_pred ---ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHhhhc
Confidence 457889999999999 999999999999999999999999999999999999886543 33444434 456666
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-77 Score=635.87 Aligned_cols=387 Identities=22% Similarity=0.314 Sum_probs=295.8
Q ss_pred hccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 32 KHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
++.+.+++|+|++++..++++|.++.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++.+ |+||++
T Consensus 11 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~-- 86 (439)
T 2xu9_A 11 RSQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF-- 86 (439)
T ss_dssp ECBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT--
T ss_pred ccCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc--
Confidence 4567789999999999999999999999999999999999999999999999999999999999999976 699986
Q ss_pred CccccCCCCeEEEEEEEc-ccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHH
Q 008592 112 TQCPIQTGQSYVYNFTVT-GQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTET 185 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~-~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 185 (560)
+.|+||++|+|+|+++ +++||||||||.++ |. +||+|+|||+++.+....+ ..++|++|+|+||+++....
T Consensus 87 --~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~-~~~~e~~l~l~D~~~~~~~~ 163 (439)
T 2xu9_A 87 --LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPEL-REAEEHLLVLKDLALQGGRP 163 (439)
T ss_dssp --CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHH-HTSEEEEEEEEEECEETTEE
T ss_pred --ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccC-CCCCcEEEEEEeeeeCCCCc
Confidence 4699999999999985 58999999999865 44 8999999999875421111 24789999999999876310
Q ss_pred H--HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCcc
Q 008592 186 I--INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYA 263 (560)
Q Consensus 186 ~--~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v 263 (560)
. .......+ ..++.++|||+.. +.++|++| +|||||||+|..+.+.|+|+||+|+|||+||+++
T Consensus 164 ~~~~~~~~~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~ 229 (439)
T 2xu9_A 164 APHTPMDWMNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFL 229 (439)
T ss_dssp CCCCHHHHHHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred CCCCccccccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCC
Confidence 0 00000112 2468999999964 58999999 9999999999999999999999999999999997
Q ss_pred -CC-------------------CCCCceEEEEeccCCCCCCc--------------CCCcceEEEEEecCCCCCCCCCCC
Q 008592 264 -KS-------------------KAPNANFLIAARPYATGPAS--------------FDNTTTAGVLEYDQPNGITTKNLP 309 (560)
Q Consensus 264 -~p-------------------~~~~~~y~i~~~~~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~~ 309 (560)
+| ...+|+|+|++.....+... .......++++|.+.... .
T Consensus 230 ~~p~~~~~l~l~pgeR~dv~v~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~- 304 (439)
T 2xu9_A 230 EEPLEVSELLLAPGERAEVLVRLRKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP----L- 304 (439)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC----C-
T ss_pred CCceEeceEEECCceeEEEEEEcCCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc----c-
Confidence 55 11256777777543221100 011245678888764211 0
Q ss_pred CCCCCCCCCCCCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccC
Q 008592 310 LLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQ 389 (560)
Q Consensus 310 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~ 389 (560)
.+|... ..+..+ + .+ ..++++.+..+. .+ ..|++|+++|..
T Consensus 305 ------~~p~~l---------~~~~~l-----~--~~-~~~r~~~l~~~~--------------~g--~~~~iNg~~~~~ 345 (439)
T 2xu9_A 305 ------PLPKAL---------SPFPTL-----P--AP-VVTRRLVLTEDM--------------MA--ARFFINGQVFDH 345 (439)
T ss_dssp ------CCCSCC---------CCCCCC-----C--CC-SEEEEEEEEEEG--------------GG--TEEEETTBCCCT
T ss_pred ------cCcccC---------CCcccC-----C--CC-CcceEEEEEeec--------------cC--ceEeECCEECCC
Confidence 111100 001111 0 11 123555555432 01 248899987732
Q ss_pred CchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcc
Q 008592 390 PNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFN 469 (560)
Q Consensus 390 p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~ 469 (560)
+. ..+.++.|++++|+|+|.+ .+.||||||||+
T Consensus 346 ~~--------------------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~ 378 (439)
T 2xu9_A 346 RR--------------------------------------------VDLKGQAQTVEVWEVENQG---DMDHPFHLHVHP 378 (439)
T ss_dssp TC--------------------------------------------CCEEECTTCEEEEEEEECS---SSCEEEEESSCC
T ss_pred CC--------------------------------------------CceecCCCCEEEEEEEcCC---CCCCCceeCCCc
Confidence 20 0156889999999999965 489999999999
Q ss_pred eEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 470 FFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 470 F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||||+++.+. +.+|.|||||.|+++++++|||++||||.|+|||||+||||.|||++|+|.
T Consensus 379 F~Vl~~~g~~-----------~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 379 FQVLSVGGRP-----------FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp BEEEEETTEE-----------CSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEeeCCCC-----------CCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 9999997543 247999999999999999999999999999999999999999999999883
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-78 Score=637.55 Aligned_cols=387 Identities=16% Similarity=0.189 Sum_probs=290.3
Q ss_pred eEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccc
Q 008592 37 TRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCP 115 (560)
Q Consensus 37 ~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 115 (560)
+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++++. +||+| ||+
T Consensus 18 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~~ 92 (451)
T 2uxt_A 18 GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---ARM 92 (451)
T ss_dssp SCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GGC
T ss_pred ceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cCc
Confidence 578999999999987 799999999999999999999999999999999999999999999999987 99998 899
Q ss_pred cCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCC--CCcceeEEeeeccccChHHHHH
Q 008592 116 IQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQ--PFEEVPIIFGEWWKADTETIIN 188 (560)
Q Consensus 116 i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 188 (560)
|+||++|+|+|++.+++||||||||.++ |. +||+|+|||+++++...+++. .++|++|+|+||+++...++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 9999999999999556999999999955 43 899999999997654333433 4789999999999876544321
Q ss_pred HHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEE-cCCeEEEEEeCCCcc-CCC
Q 008592 189 EAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSI-ANHTLTIVETDAVYA-KSK 266 (560)
Q Consensus 189 ~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~p~ 266 (560)
...+.....+++++|||+.. +.++|++| +|||||||+|..+.+.|+| +||+|+|||+||+++ +|.
T Consensus 173 --~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~ 239 (451)
T 2uxt_A 173 --NEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPV 239 (451)
T ss_dssp --CCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEE
T ss_pred --ccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCce
Confidence 11122345689999999975 47999999 9999999999999999999 899999999999987 551
Q ss_pred -------CC------------CceEEEEeccCCCCCC-------cCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 008592 267 -------AP------------NANFLIAARPYATGPA-------SFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKF 320 (560)
Q Consensus 267 -------~~------------~~~y~i~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~ 320 (560)
.+ .++|+|++........ ........++++|...... .+.. . .+|.
T Consensus 240 ~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~----~~~~-~--~~p~- 311 (451)
T 2uxt_A 240 SVKQLSLAPGERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLL----PLVT-D--SLPM- 311 (451)
T ss_dssp EESSEEECTTCEEEEEEECTTCCCEEEEC----------------CCCCSCCEEEEEEECSCC----C-------CCCS-
T ss_pred EeceEEECceeEEEEEEEeCCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCC----cCcc-c--cCcc-
Confidence 12 2445555443221100 0111233567777654211 0000 0 1111
Q ss_pred CCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhc
Q 008592 321 NDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFF 400 (560)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~ 400 (560)
.|.++... + .+...+++ +.++ + .|+||+++|..+
T Consensus 312 -----------~L~~~~~~--~--~~~~~~~~--~~l~----------------~---~~~iNg~~f~~~---------- 345 (451)
T 2uxt_A 312 -----------RLLPTEIM--A--GSPIRSRD--ISLG----------------D---DPGINGQLWDVN---------- 345 (451)
T ss_dssp -----------CSSSSCCC--C--CCCSEEEE--EEEC----------------S---SSSBTTBCCCTT----------
T ss_pred -----------ccCCCCCC--C--CCCcceEE--EEEe----------------e---EEEECCEeCCCC----------
Confidence 12111110 1 11112222 2221 1 378888776322
Q ss_pred cCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCC
Q 008592 401 NRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNF 480 (560)
Q Consensus 401 ~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~ 480 (560)
...+.++.|++|+|+|+|. +.||||||||+||||+++..
T Consensus 346 ----------------------------------~~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G~-- 384 (451)
T 2uxt_A 346 ----------------------------------RIDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNGA-- 384 (451)
T ss_dssp ----------------------------------CCCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETTB--
T ss_pred ----------------------------------CCcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCCc--
Confidence 1125778999999999994 58999999999999999622
Q ss_pred CCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCcee----eEEEeechhhhhcccEEEEEEcCCCC
Q 008592 481 DPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGV----WFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 481 ~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~----w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
.+++.+|.|||||.| +++++|+|++||||. |||||||++|||.|||++|+|.+.+.
T Consensus 385 -------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~ 444 (451)
T 2uxt_A 385 -------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPR 444 (451)
T ss_dssp -------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC
T ss_pred -------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCcc
Confidence 345678999999999 999999999999988 99999999999999999999987654
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-76 Score=632.08 Aligned_cols=400 Identities=19% Similarity=0.299 Sum_probs=291.3
Q ss_pred eEEEEEEEEEEE--eeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCcc
Q 008592 37 TRHYKFHIKMQN--ITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQC 114 (560)
Q Consensus 37 ~~~~~l~~~~~~--~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 114 (560)
+++|+|++++.. +.++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++.+. +||++ ||
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~~ 110 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---ED 110 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---SS
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---CC
Confidence 478999999644 668898999999999999999999999999999999999999999999999864 99974 79
Q ss_pred ccCCCCeEEEEEEEcccCcceeEeecccccc-----ccceEeEEEeCCCCCCCCCCC--CCcceeEEeeeccccChHHHH
Q 008592 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-----ATLYGPIIILPKQQASYPFPQ--PFEEVPIIFGEWWKADTETII 187 (560)
Q Consensus 115 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 187 (560)
+|+||++|+|+|++.+++||||||||.++++ +||+|+|||+++.+..++++. .++|++|+|+||+++...++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999866689999999998753 799999999998876665554 367899999999887654432
Q ss_pred HHHHhcC-CCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcC-------CeEEEEEeC
Q 008592 188 NEAMQTG-GAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIAN-------HTLTIVETD 259 (560)
Q Consensus 188 ~~~~~~~-~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~g-------h~~~via~D 259 (560)
. ..+ .....+|.++|||+.++ .++|++ ++|||||||+|..+.+.|+|++ |+|+|||+|
T Consensus 191 ~---~~~~~~~~~gd~~lvNG~~~p----------~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~D 256 (534)
T 3abg_A 191 T---TNGELNSFWGDVIHVNGQPWP----------FKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASD 256 (534)
T ss_dssp C---CTTCSSCCCCSEEEETTEESC----------BCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEET
T ss_pred c---cCCCCccccCceeccCCccCc----------eEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeC
Confidence 1 111 12345799999999764 577887 5899999999999999999987 999999999
Q ss_pred CCc-cCC--------------------CCCCc-eEEEEeccCCC-CCC-cCCCcceEEEEEecCCCCCCCCCCCCCCCCC
Q 008592 260 AVY-AKS--------------------KAPNA-NFLIAARPYAT-GPA-SFDNTTTAGVLEYDQPNGITTKNLPLLKPAA 315 (560)
Q Consensus 260 G~~-v~p--------------------~~~~~-~y~i~~~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~ 315 (560)
|++ .+| ++..+ +|+|+...... +.. ..+.....++++|......... . +.
T Consensus 257 G~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-~----~~- 330 (534)
T 3abg_A 257 SGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQP-D----TS- 330 (534)
T ss_dssp TEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCS-C----CC-
T ss_pred CCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCC-C----CC-
Confidence 985 455 11122 45555432111 100 0111223577777654211000 0 00
Q ss_pred CCCCCCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhh
Q 008592 316 ILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALL 395 (560)
Q Consensus 316 ~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l 395 (560)
..| ..+..+.. +. .+...++.+. +.. .+ ..|+||+++|..+..
T Consensus 331 ~~P------------~~L~~~~~---p~-~~~~~~~~~~--~~~--------------~~--~~w~iNG~~f~~~~~--- 373 (534)
T 3abg_A 331 VVP------------ANLRDVPF---PS-PTTNTPRQFR--FGR--------------TG--PTWTINGVAFADVQN--- 373 (534)
T ss_dssp CCC------------CCCCCCSC---CC-CCCCCCEEEE--CSC--------------CC--STTCCCCBTTBCTTS---
T ss_pred CCc------------cccccCCC---CC-CccccceEEE--Eec--------------cC--ceeEECCcccCCCCC---
Confidence 111 11111110 10 1112333332 211 01 247899887743210
Q ss_pred HHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEe
Q 008592 396 QAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQ 475 (560)
Q Consensus 396 ~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~ 475 (560)
|. ...++.|++++|+|+|.+ ..+.||||||||+||||++
T Consensus 374 --------------------p~-------------------l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~~ 412 (534)
T 3abg_A 374 --------------------RL-------------------LANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVISR 412 (534)
T ss_dssp --------------------CC-------------------CCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEEE
T ss_pred --------------------cc-------------------eeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEEE
Confidence 10 135778999999999964 2469999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEE-ecCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 476 GFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFL-ADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 476 ~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+.|.+.. ...++++ .|||||.|+|+++++|||+ +||||.|+|||||++|+|.|||+.|.|.+.+
T Consensus 413 ~~g~~~~----~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 413 TSGNNAR----TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp SSCCSSS----CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred cCCCCcC----cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 6554321 1345566 9999999999999999998 8999999999999999999999999997765
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-75 Score=627.16 Aligned_cols=413 Identities=19% Similarity=0.264 Sum_probs=293.6
Q ss_pred ceEEEEEEEEEEEee--ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCc----------------------Cee
Q 008592 36 ITRHYKFHIKMQNIT--RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKY----------------------NVT 91 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~----------------------~~~ 91 (560)
...+|+|++++.... +++..+.+|+|||++|||+|++++||+|+|+|+|+|++ +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 446699999987765 45578999999999999999999999999999999975 899
Q ss_pred EEecCcccCCCcCCCCCCC--cCccccCCCCeE---EEEEEEcccCcceeEeeccccc----c-ccceEeEEEeCCCCCC
Q 008592 92 IHWHGVRQLRSGWADGPAY--VTQCPIQTGQSY---VYNFTVTGQRGTLFWHAHISWL----R-ATLYGPIIILPKQQAS 161 (560)
Q Consensus 92 iH~HG~~~~~~~~~DGv~~--~tq~~i~pG~~~---~Y~~~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~~~~~ 161 (560)
|||||+++.+. +||+|+ ++||+|+||++| +|+|++.+++||||||||.++. . +||+|+|||+++.+..
T Consensus 104 iHwHGl~~~~~--~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCCCc--cCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 99999999854 999995 799999999555 9999986689999999999863 3 7999999999987665
Q ss_pred CCCCCCCcceeEEeeeccccChHHHHHHHHh----------cCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEE
Q 008592 162 YPFPQPFEEVPIIFGEWWKADTETIINEAMQ----------TGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTY 231 (560)
Q Consensus 162 ~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~----------~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~ 231 (560)
++++.+++|++|+|+||+++...++...... .......+++++|||+.+ +.++++++ +|
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~ 250 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KY 250 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EE
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EE
Confidence 5666678999999999988765443211000 001234679999999975 36889885 89
Q ss_pred EEEEEecCCCCeEEEEEcCC-eEEEEEeCCCcc-CCC-------CCCceEEEEeccCCC-CC-----------CcCCCcc
Q 008592 232 LLRMINAALNDELFFSIANH-TLTIVETDAVYA-KSK-------APNANFLIAARPYAT-GP-----------ASFDNTT 290 (560)
Q Consensus 232 rlRliN~~~~~~~~~~i~gh-~~~via~DG~~v-~p~-------~~~~~y~i~~~~~~~-~~-----------~~~~~~~ 290 (560)
||||||+|..+.+.|+|++| +|+|||+||+++ +|. .+.+||.+.+..... .. ..+....
T Consensus 251 RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~ 330 (513)
T 2wsd_A 251 RFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPET 330 (513)
T ss_dssp EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTT
T ss_pred EEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCC
Confidence 99999999999999999999 999999999998 561 244566665543211 00 0111112
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcc
Q 008592 291 TAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTC 370 (560)
Q Consensus 291 ~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 370 (560)
..++++|........... . .+|. .+..... .+ ..+...++++.++..+..
T Consensus 331 ~~~il~~~~~~~~~~~~~----~--~~p~------------~l~~~~~--~~-~~~~~~~~~~~l~~~~~~--------- 380 (513)
T 2wsd_A 331 DANIMQFRVTKPLAQKDE----S--RKPK------------YLASYPS--VQ-HERIQNIRTLKLAGTQDE--------- 380 (513)
T ss_dssp TTEEEEEECCSCCSSCCC----C--CCCS------------BCSCCGG--GC-CCCEEEEEEEEEEEEECT---------
T ss_pred CcceEEEEeccCcccCcc----C--CCCc------------cccCCCC--cc-cCCCcceEEEEEEeecCC---------
Confidence 346677765421100000 0 1111 0110000 00 001123344444432211
Q ss_pred cCCCCCeeeeeecceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEE
Q 008592 371 QGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVM 450 (560)
Q Consensus 371 ~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i 450 (560)
.+ ...|.+|+.+|..+. .+.++.|++|+|+|
T Consensus 381 ---~g-~~~~~iNg~~~~~~~---------------------------------------------~~~~~~g~~~~w~l 411 (513)
T 2wsd_A 381 ---YG-RPVLLLNNKRWHDPV---------------------------------------------TETPKVGTTEIWSI 411 (513)
T ss_dssp ---TS-CEEEEETTBCTTSCC---------------------------------------------CBCCBTTCEEEEEE
T ss_pred ---CC-CceEeECCccCCCcc---------------------------------------------cEecCCCCEEEEEE
Confidence 12 235788987763220 13456899999999
Q ss_pred eeCCcCccCCCceeecCcceEEEEeCCC---CCCCC------CCCCCCCCCCCCccceeEeCCCCEEEEEEEe-cCceee
Q 008592 451 QDTSIIVAESHPLHLHGFNFFVVAQGFG---NFDPN------KDPAKFNLVDPAERNTVGVPSGGWVAIRFLA-DNPGVW 520 (560)
Q Consensus 451 ~N~~~~~~~~HP~HlHG~~F~Vl~~~~g---~~~~~------~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a-dnpG~w 520 (560)
+|.+ .+.||||||||+||||+++.+ .|++. ..+......++.|||||.|+|+++++|+|++ ||||.|
T Consensus 412 ~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w 488 (513)
T 2wsd_A 412 INPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRY 488 (513)
T ss_dssp EECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEE
T ss_pred EcCC---CCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCE
Confidence 9965 479999999999999998742 12111 0011122334569999999999999999998 899999
Q ss_pred EEEeechhhhhcccEEEEEEcCC
Q 008592 521 FMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 521 ~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
+|||||+||+|.|||+.|+|.+.
T Consensus 489 ~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 489 VWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp EEEESCHHHHTTTCEEEEEEBCC
T ss_pred EEEcCChhhhhcCCceeEEEeCC
Confidence 99999999999999999999753
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-75 Score=616.67 Aligned_cols=408 Identities=22% Similarity=0.277 Sum_probs=283.1
Q ss_pred hccCceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY 110 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 110 (560)
.+.+.+++|+|++++..++. +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++++ ++||+|
T Consensus 45 ~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p- 121 (481)
T 3zx1_A 45 SKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP- 121 (481)
T ss_dssp CCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT-
T ss_pred ccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc-
Confidence 46788999999999999996 68899999999999999999999999999999999999999999999964 599986
Q ss_pred cCccccCCCCeEEEEEEEccc-CcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChH
Q 008592 111 VTQCPIQTGQSYVYNFTVTGQ-RGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTE 184 (560)
Q Consensus 111 ~tq~~i~pG~~~~Y~~~~~~~-~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~ 184 (560)
||+|+||++|+|+|+++++ +||||||||.++ |. +||+|+|||+++++..+++ ++++ |+|+||+++...
T Consensus 122 --q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g 195 (481)
T 3zx1_A 122 --HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENA 195 (481)
T ss_dssp --TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTS
T ss_pred --cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCC
Confidence 8999999999999998543 899999999854 44 8999999999987655544 3454 999999987654
Q ss_pred HHHH---HHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCC
Q 008592 185 TIIN---EAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAV 261 (560)
Q Consensus 185 ~~~~---~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 261 (560)
++.. .....+ ..++.++|||+.+ +.++|++|+ ||||||+|..+.+.|+|+||+|+|||+||+
T Consensus 196 ~~~~~~~~~~~~g---~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg 260 (481)
T 3zx1_A 196 QIPNNNLNDWLNG---REGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGG 260 (481)
T ss_dssp CCCCCCHHHHHHC---CCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTE
T ss_pred ccccccchhhccC---CcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCC
Confidence 3320 000112 3579999999964 489999998 999999999999999999999999999987
Q ss_pred cc-CCC-------CCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCC--CCCCchhhhhhcc
Q 008592 262 YA-KSK-------APNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILP--KFNDTNFVMQFSK 331 (560)
Q Consensus 262 ~v-~p~-------~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~ 331 (560)
++ +|. .+.+||.+.+... ......++........ ...... +. ..+ .............
T Consensus 261 ~~~~P~~~~~l~l~pgeR~dvlv~~~--------~~~~~~l~~~~~~~~g--~~~~~~-~~-~~~~~~~~~~~~~~~lP~ 328 (481)
T 3zx1_A 261 LIEKTIYKEELFLSPASRVEVLIDAP--------KDGNFKLESAYYDRDK--MMVKEE-PN-TLFLANINLKKENVELPK 328 (481)
T ss_dssp EEEEEEEESSEEECTTCEEEEEEECS--------SCEEEEEEECCCCCCC--SSCCCC-CC-CEEEEEEEEECCCCCCCS
T ss_pred ccCCceEeCeEEECCccEEEEEEEcC--------CCcEEEEEEecccccC--ccccCC-CC-ceeEEEEecCCCCccCCc
Confidence 75 451 2445666665422 1111222211100000 000000 00 000 0000000000000
Q ss_pred cccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCe-------eeeeecceeccCCchhhhHHhhccCCC
Q 008592 332 KIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTK-------LAASVNNVSFVQPNVALLQAHFFNRSK 404 (560)
Q Consensus 332 ~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~in~~~~~~p~~~~l~~~~~~~~~ 404 (560)
.+..+ +........+++.+....... . ... . .+.. ..|+||+..|..
T Consensus 329 ~l~~~-----~~~~~~~~~r~~~l~~~~~~~--~--~~~-~-~~~~~~~~~~~~~~~iNG~~~~~--------------- 382 (481)
T 3zx1_A 329 NLKIF-----KPSEEPKEFKEIIMSEDHMQM--H--GMM-G-KSEGELKIALASMFLINRKSYDL--------------- 382 (481)
T ss_dssp CSCCC-----CCCCCCCEEEEEEEEECCSTT--T--TGG-G-CCHHHHHHHHHTTEEETTBCCCT---------------
T ss_pred cccCC-----CCCCCCCcEEEEEEeccchhc--c--ccc-c-cccccccccccceeEECCEeCCC---------------
Confidence 11111 100011123333333221000 0 000 0 0000 126777765421
Q ss_pred CcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeC-CCCCCCC
Q 008592 405 GVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQG-FGNFDPN 483 (560)
Q Consensus 405 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~-~g~~~~~ 483 (560)
....+.++.|++|+|+|.|.+ .+.|||||||+.|||+++. .|.
T Consensus 383 -----------------------------~~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~~~~g~---- 426 (481)
T 3zx1_A 383 -----------------------------KRIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISSKLNGK---- 426 (481)
T ss_dssp -----------------------------TCCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEEEETTE----
T ss_pred -----------------------------CCceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEecccCC----
Confidence 112367899999999999964 5899999999999999983 121
Q ss_pred CCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 484 KDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 484 ~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.....++.|||||.|+|+++++|+|++||||.|+|||||++|+|.|||+.|+|+
T Consensus 427 ----~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 427 ----VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp ----EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred ----CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 122345789999999999999999999999999999999999999999999996
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-74 Score=641.18 Aligned_cols=445 Identities=17% Similarity=0.218 Sum_probs=285.6
Q ss_pred ccCceEEEEEEEEEEEee--ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcC---------------------
Q 008592 33 HEGITRHYKFHIKMQNIT--RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYN--------------------- 89 (560)
Q Consensus 33 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~--------------------- 89 (560)
+....+.|+|++.+.... +++..+.+|+|||++|||+|++++||+|+|+|+|+|+++
T Consensus 28 ~~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~ 107 (612)
T 3gyr_A 28 SDEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPN 107 (612)
T ss_dssp CSCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGG
T ss_pred cCCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccc
Confidence 344567888888876655 566788999999999999999999999999999999654
Q ss_pred --------------------eeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccc----cc
Q 008592 90 --------------------VTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW----LR 145 (560)
Q Consensus 90 --------------------~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~ 145 (560)
|+|||||+++.+. +||++ ||+|.||++|+|+|++.+++||||||||.++ |+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~~--~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~ 182 (612)
T 3gyr_A 108 TEPGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNV 182 (612)
T ss_dssp GSCSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHT
T ss_pred ccccccccccccccccCCCCceEEcCCCccCCc--ccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhh
Confidence 6789999988654 89875 9999999999999998667899999999865 44
Q ss_pred -ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHH-------------hc---CCCCCCCceEEEcCc
Q 008592 146 -ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAM-------------QT---GGAPNISDAFTINGL 208 (560)
Q Consensus 146 -~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-------------~~---~~~~~~~d~~lvNG~ 208 (560)
+||+|+|||+++++..++++.+++|++|+|+||+++...+...... .. ......++.++|||+
T Consensus 183 ~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~ 262 (612)
T 3gyr_A 183 MAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGR 262 (612)
T ss_dssp TTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTE
T ss_pred hccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCC
Confidence 7999999999988777777778999999999998865443211000 00 012345789999999
Q ss_pred CCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCC-------eEEEEEeCCCccC-C---C----------C
Q 008592 209 PGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANH-------TLTIVETDAVYAK-S---K----------A 267 (560)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v~-p---~----------~ 267 (560)
.+ +.+.++. ++|||||||+|..+.+.|+|++| +|+|||+||++++ | + .
T Consensus 263 ~~----------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~ 331 (612)
T 3gyr_A 263 IW----------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAA 331 (612)
T ss_dssp ES----------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEEC
T ss_pred cc----------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEec
Confidence 75 4677765 58999999999999999999998 5999999999874 2 1 1
Q ss_pred CCceEEEEeccCCCCCC-----------------cCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhc
Q 008592 268 PNANFLIAARPYATGPA-----------------SFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFS 330 (560)
Q Consensus 268 ~~~~y~i~~~~~~~~~~-----------------~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 330 (560)
+.+||.+.+........ .........+++|......... .. .++....
T Consensus 332 pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~p~~~~-------- 396 (612)
T 3gyr_A 332 PAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEED-SF------ALPEVLS-------- 396 (612)
T ss_dssp TTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCC-CC------CCCSSCC--------
T ss_pred cceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCC-cc------ccccccc--------
Confidence 34577766653211100 0000111233333221110000 00 0010000
Q ss_pred ccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceec----cCCchhhhHHhhccCCCCc
Q 008592 331 KKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSF----VQPNVALLQAHFFNRSKGV 406 (560)
Q Consensus 331 ~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~----~~p~~~~l~~~~~~~~~g~ 406 (560)
.. ........+ ...+.......... ........+.+..... ..+....
T Consensus 397 ----~~-~~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 448 (612)
T 3gyr_A 397 ----GS-FRRMSHDIP--HGHRLIVLTPPGTK---------GSGGHPEIWEMAEVEDPADVQVPAEGV------------ 448 (612)
T ss_dssp ----SS-CCCCCTTSC--CEEEEEEEECTTCT---------TTTTCCEEEEEEECC-----CCSCTTE------------
T ss_pred ----cc-ccccccccc--cccccccccccccc---------cccccccccccccccccccccccccce------------
Confidence 00 000000000 01111111000000 0000111111111110 0000000
Q ss_pred ccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCC--
Q 008592 407 YTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNK-- 484 (560)
Q Consensus 407 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~-- 484 (560)
.........+..+..++ ........+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.+....
T Consensus 449 ~~~~~~~~~~~~~~~n~------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~ 519 (612)
T 3gyr_A 449 IQVTGADGRTKTYRRTA------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLA 519 (612)
T ss_dssp EEEECTTSCEEEEEEEE------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETT
T ss_pred eeeccCCCccccccccC------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCcccccc
Confidence 00000000001111111 0112234578899999999999975 489999999999999998644332210
Q ss_pred -------------CCCCCCCCCCCccceeEeCCCCEEEEEEE-ecCceeeEEEeechhhhhcccEEEEEEcCCCC
Q 008592 485 -------------DPAKFNLVDPAERNTVGVPSGGWVAIRFL-ADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 485 -------------~~~~~~~~~p~~rDTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
.....+..++.|||||.|+++++++|||+ +||||.||||||||+|||.|||+.|+|.+++.
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 520 LGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp TTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred ccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 01235667889999999999999999998 69999999999999999999999999987654
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-74 Score=607.29 Aligned_cols=369 Identities=20% Similarity=0.310 Sum_probs=269.0
Q ss_pred EEECCC-CCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeE
Q 008592 59 VTVNGQ-FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFW 137 (560)
Q Consensus 59 ~~~ng~-~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wY 137 (560)
|+|||+ +|||+|++++||+|+|+|+|+|+++|+|||||+++++ ++||+|+ |+|+||++|+|+|++++++|||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~wY 102 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTYLY 102 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCceEe
Confidence 999999 9999999999999999999999999999999999974 5999997 999999999999999658999999
Q ss_pred eecccc----cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHH--HHHhcCCCCCCCceEEEcCcCC
Q 008592 138 HAHISW----LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIIN--EAMQTGGAPNISDAFTINGLPG 210 (560)
Q Consensus 138 H~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~d~~lvNG~~~ 210 (560)
|||.++ |. +||+|+|||+++++. ++++...+|++|+|+||+++. .++.. .... ......+++++|||+..
T Consensus 103 H~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~~~~~~~-~~~~~~~~~~liNG~~~ 179 (448)
T 3aw5_A 103 HPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVYNPTPME-MIAGFLGNAVLVNGVKD 179 (448)
T ss_dssp EECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEECCCCHHH-HHHCCCCSEEEETTEET
T ss_pred ccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccccccccc-cccCccccEEEECCccc
Confidence 999544 54 899999999998765 333322389999999999876 43211 0000 01124579999999974
Q ss_pred CCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEE--cC---CeEEEEEeCCCccC-CC-------CC---------
Q 008592 211 PFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSI--AN---HTLTIVETDAVYAK-SK-------AP--------- 268 (560)
Q Consensus 211 ~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~~v~-p~-------~~--------- 268 (560)
+.++|++| +|||||||+|..+.+.|+| +| |+|+|||+||++++ |. .+
T Consensus 180 ----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 248 (448)
T 3aw5_A 180 ----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVE 248 (448)
T ss_dssp ----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred ----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEE
Confidence 58999999 9999999999999999999 99 99999999999998 61 11
Q ss_pred --CceEEEEeccCCCCCC----------cCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccc
Q 008592 269 --NANFLIAARPYATGPA----------SFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSL 336 (560)
Q Consensus 269 --~~~y~i~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~ 336 (560)
.+.|||++.....+.+ ........++++|.+.... + . | ..|..+
T Consensus 249 ~~~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~-p------------~~L~~l 304 (448)
T 3aw5_A 249 LGEGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEA---------V--P-V------------EALSDP 304 (448)
T ss_dssp ECSEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCC---------C--C-C------------CCCSCC
T ss_pred CCCCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCC---------C--C-c------------cccCCC
Confidence 2456666554322111 0111234566777543211 0 0 0 001111
Q ss_pred ccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCcccCCCCCCCC
Q 008592 337 ATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPP 416 (560)
Q Consensus 337 ~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p 416 (560)
.. ...+...++++.+..+ ...|++|+++|..++ |
T Consensus 305 p~----~~~~~~~~~~~~l~~~------------------~~~~~iNg~~~~~~~------------------------p 338 (448)
T 3aw5_A 305 PP----EPPKPTRTRRFALSLS------------------GMQWTINGMFWNASN------------------------P 338 (448)
T ss_dssp CC----CCCCCSEEEEEEEEEE------------------TTEEEETTBCCCTTC------------------------T
T ss_pred CC----CCCCCCceEEEEEeCC------------------CceeeECCCcCCCCC------------------------C
Confidence 00 0112233454444321 124899998874320 1
Q ss_pred ccccCCCCCCCCccccCCcEEEE-ecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCC----CC
Q 008592 417 FKFNYTGTPPSNIMVSSGTKVVV-LPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKF----NL 491 (560)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~----~~ 491 (560)
.+. ++.|++|+|+|+|.+ ..+.||||||||+||||+++ |.+........+ +.
T Consensus 339 --------------------~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p 395 (448)
T 3aw5_A 339 --------------------LFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLP 395 (448)
T ss_dssp --------------------TCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCG
T ss_pred --------------------ceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCcccccccccccCCCc
Confidence 123 678999999999964 14799999999999999985 433211111122 33
Q ss_pred CCCCccceeEeCCCCEEEEE--EE---ecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 492 VDPAERNTVGVPSGGWVAIR--FL---ADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 492 ~~p~~rDTv~vpp~g~v~ir--f~---adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.++.|||||.|+|+++++|+ |+ +||| |+|||||+||||.|||++|+|.
T Consensus 396 ~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 396 TDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp GGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred cccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 45689999999999999665 98 8999 9999999999999999999883
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-73 Score=599.40 Aligned_cols=417 Identities=18% Similarity=0.237 Sum_probs=281.0
Q ss_pred ceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccc
Q 008592 36 ITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCP 115 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 115 (560)
..++|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++++. +||+| ||+
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~~ 90 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QGI 90 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TCC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cCc
Confidence 3477999999999999999999999999999999999999999999999999999999999999864 99987 899
Q ss_pred cCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCC--CCcceeEEeeeccccChHHHHH
Q 008592 116 IQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQ--PFEEVPIIFGEWWKADTETIIN 188 (560)
Q Consensus 116 i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 188 (560)
|.||++|+|+|++.+++||||||||.++ |. +||+|+|||+++++..++++. ..+|++|+|+||+++...++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 9999999999998556899999999865 33 799999999998765444443 3468999999999875543210
Q ss_pred HH-HhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEE-cCCeEEEEEeCCCcc-CC
Q 008592 189 EA-MQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSI-ANHTLTIVETDAVYA-KS 265 (560)
Q Consensus 189 ~~-~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~p 265 (560)
.. .........+|.++|||+.+| .+.+ +|++|||||||+|..+.+.|+| +||+|+|||+||+++ +|
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~p----------~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P 239 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIYP----------QHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSSC----------EEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEE
T ss_pred cccccccccCCCCCEEEEcCCcCc----------cEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCc
Confidence 00 000001235799999999754 4455 5789999999999999999999 699999999999986 56
Q ss_pred C-------CCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCC-CCCC--CCCchh--hhhhcccc
Q 008592 266 K-------APNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAA-ILPK--FNDTNF--VMQFSKKI 333 (560)
Q Consensus 266 ~-------~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~-~~~~--~~~~~~--~~~~~~~l 333 (560)
. .+.+||.+.+.... .....++........ .... +.. ..+. ...... .......|
T Consensus 240 ~~~~~l~l~pGeR~dvlv~~~~--------~~~~~l~~~~~~~~g----~~~~-~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 240 VKVSELPVLMGERFEVLVEVND--------NKPFDLVTLPVSQMG----MAIA-PFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp EEESCEEECTTCEEEEEEEECT--------TCCEEEEECCCSSTT----TTST-TTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred cEeceEEECCCCEEEEEEEeCC--------CceEEEEEeccCCCC----cccc-cccCccceeEecccccCCCCCCCccc
Confidence 2 24467777665321 111122211111000 0000 000 0000 000000 00000001
Q ss_pred cccccCCCCCCCCCCcceeEEEEeccC----------------CcCCC---------CCCccc-CCCCCee----eeeec
Q 008592 334 RSLATAKFPAKVPMKVDRRFFFTVGLG----------------LSPCP---------QNQTCQ-GPNNTKL----AASVN 383 (560)
Q Consensus 334 ~~~~~~~~p~~~p~~~~~~~~~~~~~~----------------~~~~~---------~~~~~~-~~~~~~~----~~~in 383 (560)
..+. ..+ .++....+++.+.+... ..... .+..+. ...|..+ .|+||
T Consensus 307 ~~~~--~~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~IN 383 (488)
T 3od3_A 307 SSLP--ALP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKIN 383 (488)
T ss_dssp CCCC--CCC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEET
T ss_pred ccCC--CCc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeEC
Confidence 1100 000 01112345555543200 00000 000000 0001111 25777
Q ss_pred ceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCce
Q 008592 384 NVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPL 463 (560)
Q Consensus 384 ~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~ 463 (560)
+++|... ...+.++.|++|+|.|.|.+. .+.|||
T Consensus 384 G~~~~~~--------------------------------------------~~~~~~~~G~~e~w~l~N~~~--~~~Hp~ 417 (488)
T 3od3_A 384 GQAFDMN--------------------------------------------KPMFAAAKGQYERWVISGVGD--MMLHPF 417 (488)
T ss_dssp TBCCCTT--------------------------------------------CCSEECCBSSCEEEEEECTTC--CCCEEE
T ss_pred CeeCCCC--------------------------------------------CCceEcCCCCEEEEEEEeCCC--CCCccE
Confidence 7665211 112678899999999999752 479999
Q ss_pred eecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe----cCceeeEEEeechhhhhcccEEEEE
Q 008592 464 HLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA----DNPGVWFMHCHLEVHTSWGLKMAWI 539 (560)
Q Consensus 464 HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a----dnpG~w~~HCHil~H~d~GMm~~~~ 539 (560)
||||++|+|++++.. .....++.|||||.|+ |+++.|+|++ ++||.|||||||++|||.|||..|+
T Consensus 418 HlHg~~F~Vl~~~g~---------~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~ 487 (488)
T 3od3_A 418 HIHGTQFRILSENGK---------PPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFT 487 (488)
T ss_dssp EETTCCBEEEEBTTB---------CCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEE
T ss_pred EEcCceEEEeccCCC---------ccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEE
Confidence 999999999998532 1223456899999999 9999999997 4578999999999999999999998
Q ss_pred E
Q 008592 540 V 540 (560)
Q Consensus 540 V 540 (560)
|
T Consensus 488 V 488 (488)
T 3od3_A 488 V 488 (488)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-55 Score=446.70 Aligned_cols=144 Identities=27% Similarity=0.499 Sum_probs=129.3
Q ss_pred ceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCcc
Q 008592 36 ITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQC 114 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 114 (560)
++|+|+|++++..++. +|..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++.+..++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999887 578889999999999999999999999999999999999999999999988889999999999
Q ss_pred ccCCCCeEEEEEEEcccCcceeEeecccccc----ccceEeEEEeCCCCCCCCCCCCCcceeEEeeecccc
Q 008592 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISWLR----ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKA 181 (560)
Q Consensus 115 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~ 181 (560)
+|+||++++|+|++ +++||||||||.+.+. +||+|+|||++++..+.+. ..++|++|+|+||+++
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~ 149 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSS 149 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGG
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccc
Confidence 99999999999998 7999999999997653 7999999999875432111 3488999999999864
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-53 Score=425.33 Aligned_cols=142 Identities=28% Similarity=0.403 Sum_probs=126.8
Q ss_pred hccCceEEEEEEEEEEEeeec-CceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNITRL-CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY 110 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~~-g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 110 (560)
...+.+++|+|++++..+... |..+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++. .++||+|+
T Consensus 29 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~ 105 (288)
T 3gdc_A 29 PDGRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPG 105 (288)
T ss_dssp TTSCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTT
T ss_pred CCCCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCC
Confidence 346678999999999888764 89999999999999999999999999999999999999999999982 46999999
Q ss_pred cCccccCCCCeEEEEEEEcccCcceeEeecccc---cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeecccc
Q 008592 111 VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW---LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKA 181 (560)
Q Consensus 111 ~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~ 181 (560)
++||+|+||++++|+|++ +++||||||||.+. +. +||+|+|||+++...+ ..++|++|+++||+.+
T Consensus 106 ~~~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~ 175 (288)
T 3gdc_A 106 IGAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTD 175 (288)
T ss_dssp STTCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCS
T ss_pred ccceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecC
Confidence 999999999999999998 89999999999974 33 8999999999886532 3478999999998754
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-51 Score=418.34 Aligned_cols=211 Identities=30% Similarity=0.504 Sum_probs=173.5
Q ss_pred ceEEEEEEEEEEEeeec-CceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCcc
Q 008592 36 ITRHYKFHIKMQNITRL-CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQC 114 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~~-g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 114 (560)
++++|+|++++..++++ |.++.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++.+.+|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999999875 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEEEcccCcceeEeecccc--c-c-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHH
Q 008592 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISW--L-R-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEA 190 (560)
Q Consensus 115 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~--~-~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 190 (560)
+|+||++|+|+|++ .++||||||||... | . +||+|+|||++++....+ ...++|++|+|+||+.......
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~~---- 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADKY---- 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTCT----
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheeccccccc----
Confidence 99999999999998 68999999999876 3 3 799999999987543211 1247899999999987322110
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCC
Q 008592 191 MQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDA 260 (560)
Q Consensus 191 ~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 260 (560)
...+.....++.++|||+..+ ....+++++|++|||||+|++. ..+.|+|+||+|+||+.||
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~DG 217 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAGG-GIHAMHSHGHDMLVTHKDG 217 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECSS-SCEEEEETTCCEEEEEETT
T ss_pred CCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCCC-ceEEEEECCcEEEEEEeCC
Confidence 001111124689999999754 2345889999999999999884 3677777777777777765
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=408.53 Aligned_cols=135 Identities=25% Similarity=0.385 Sum_probs=112.9
Q ss_pred hccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 32 KHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
.+.|.+|+|+|++++.. .+.....++++||++|||+||+++||+|+|+|+|+++++++|||||+++.. ++||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-T
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-C
Confidence 35789999999998743 333445677899999999999999999999999999999999999999986 499999 9
Q ss_pred CccccCCCCeEEEEEEEcc------------cCcceeEeecccc------cc-ccceEeEEEeCCCCCCCCCCCCCccee
Q 008592 112 TQCPIQTGQSYVYNFTVTG------------QRGTLFWHAHISW------LR-ATLYGPIIILPKQQASYPFPQPFEEVP 172 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~ 172 (560)
+||+|+||++|+|+|++.+ ++||||||||.++ |. +||+|+|||+++.... .|+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceE
Confidence 9999999999999999843 3799999999975 33 7999999999886421 256666
Q ss_pred EEee
Q 008592 173 IIFG 176 (560)
Q Consensus 173 l~~~ 176 (560)
|+++
T Consensus 152 l~l~ 155 (276)
T 3kw8_A 152 IVFN 155 (276)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6554
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=412.28 Aligned_cols=138 Identities=22% Similarity=0.381 Sum_probs=110.9
Q ss_pred hhhccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC
Q 008592 30 LAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA 109 (560)
Q Consensus 30 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~ 109 (560)
..+..+.+|+|+|.+++..-. ...+.++.+||++|||+||+++||+|+|+|+|+|++++||||||+++.+. +||++
T Consensus 22 p~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~ 97 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKISDE--LYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL 97 (299)
T ss_dssp -----CCEEEEEEEEEEEETT--EEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT
T ss_pred CcccCCCEEEEEEEEEecCCC--ceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc
Confidence 345678999999999875422 13455666799999999999999999999999999999999999998754 99997
Q ss_pred CcCccccCCCCeEEEEEEEc------------ccCcceeEeecccccc-------ccceEeEEEeCCCCCCCCCCCCCcc
Q 008592 110 YVTQCPIQTGQSYVYNFTVT------------GQRGTLFWHAHISWLR-------ATLYGPIIILPKQQASYPFPQPFEE 170 (560)
Q Consensus 110 ~~tq~~i~pG~~~~Y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e 170 (560)
++||+|+||++|+|+|+++ .++||||||||.+++. +||+|+|||+++... ..|+|
T Consensus 98 -~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e 171 (299)
T 3t9w_A 98 -MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQ 171 (299)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEE
T ss_pred -cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccccc
Confidence 8999999999999999974 2689999999987642 599999999987642 22566
Q ss_pred eeEEeee
Q 008592 171 VPIIFGE 177 (560)
Q Consensus 171 ~~l~~~d 177 (560)
++|+++|
T Consensus 172 ~~l~~~~ 178 (299)
T 3t9w_A 172 FTVVFND 178 (299)
T ss_dssp EEEEEET
T ss_pred ceeeeee
Confidence 6666544
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=409.17 Aligned_cols=138 Identities=25% Similarity=0.404 Sum_probs=115.4
Q ss_pred hhhccCceEEEEEEEEEEEeeecC-ceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCC
Q 008592 30 LAKHEGITRHYKFHIKMQNITRLC-QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGP 108 (560)
Q Consensus 30 ~~~~~~~~~~~~l~~~~~~~~~~g-~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv 108 (560)
.+.+.|.+|+++|.+++ -++| ..+.++..||++|||+||+++||+|+|+|+|+|+++++|||||+++... +||+
T Consensus 6 ~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~ 80 (313)
T 3tas_A 6 TAPAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGT 80 (313)
T ss_dssp BCCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCS
T ss_pred cCCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCC
Confidence 45567888999988753 2455 3455677899999999999999999999999999999999999999765 9999
Q ss_pred CCcCccccCCCCeEEEEEEEc------------ccCcceeEeecccccc-------ccceEeEEEeCCCCCCCCCCCCCc
Q 008592 109 AYVTQCPIQTGQSYVYNFTVT------------GQRGTLFWHAHISWLR-------ATLYGPIIILPKQQASYPFPQPFE 169 (560)
Q Consensus 109 ~~~tq~~i~pG~~~~Y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~ 169 (560)
+ ++||+|+||++|+|+|++. .++||||||||..++. +||+|+|||+++.+. ..|+
T Consensus 81 ~-~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~ 154 (313)
T 3tas_A 81 K-QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDR 154 (313)
T ss_dssp T-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSE
T ss_pred c-cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cccc
Confidence 8 6999999999999999862 3689999999987642 699999999988643 2377
Q ss_pred ceeEEeeec
Q 008592 170 EVPIIFGEW 178 (560)
Q Consensus 170 e~~l~~~d~ 178 (560)
|++|+|+||
T Consensus 155 e~~l~~~d~ 163 (313)
T 3tas_A 155 THTIVFNDM 163 (313)
T ss_dssp EEEEEEETT
T ss_pred cceeeccch
Confidence 888888764
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=450.59 Aligned_cols=224 Identities=16% Similarity=0.225 Sum_probs=165.0
Q ss_pred EEEEEEEEeeec-CceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC--------c
Q 008592 41 KFHIKMQNITRL-CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY--------V 111 (560)
Q Consensus 41 ~l~~~~~~~~~~-g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~--------~ 111 (560)
.+.++++..+.. |..+..|+ ++|||+||+++||+|+|+|+|+|+++++|||||++++.. +||+|+ +
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREK 124 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccccc
Confidence 444444333332 44455553 899999999999999999999999999999999998753 666664 8
Q ss_pred CccccCCCCeEEEEEEEcc---------cCcceeEeeccccc--c-ccceEeEEEeCCCCCCCCCCCCCcceeEEeee--
Q 008592 112 TQCPIQTGQSYVYNFTVTG---------QRGTLFWHAHISWL--R-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGE-- 177 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~---------~~Gt~wYH~H~~~~--~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d-- 177 (560)
|||+|+||++|+|+|++++ ++||||||||.+.+ . +||+|+|||+++.....+.....+|++|++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 9999999999999999853 46999999999873 4 89999999999765332221223788888764
Q ss_pred ----ccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCC-eEEEEEcCCe
Q 008592 178 ----WWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALND-ELFFSIANHT 252 (560)
Q Consensus 178 ----~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~-~~~~~i~gh~ 252 (560)
|++......+.. ..........+.++|||+.. | ..+.+++++|++|||||||++... .+.|+|+||.
T Consensus 205 e~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~ 276 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQD-RDAASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHT 276 (742)
T ss_dssp CSSSSCCCCCC--------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCC
T ss_pred CCcccccccccccccc-CCCccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCE
Confidence 554433221111 11111222357789999963 2 346789999999999999999775 7899999999
Q ss_pred EEEEE--eCCCccCCCC---------CCceEEEEec
Q 008592 253 LTIVE--TDAVYAKSKA---------PNANFLIAAR 277 (560)
Q Consensus 253 ~~via--~DG~~v~p~~---------~~~~y~i~~~ 277 (560)
|+|++ +|+..|.|.+ .+|.|.+.+.
T Consensus 277 f~Vvg~~~Dtv~v~Pg~~~~v~~~~~~pG~w~~hCH 312 (742)
T 2r7e_A 277 FLVRNHRQASLEISPITFLTAQTLLMDLGQFLLFCH 312 (742)
T ss_dssp CEETTEECCSCCCCTTCCCEEEECCCSCSEECCCCC
T ss_pred EEEEeEecceEEeCCCcEEEEEEEeCCCeeEEEEeC
Confidence 99998 7999998832 3466766655
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-48 Score=396.89 Aligned_cols=135 Identities=26% Similarity=0.394 Sum_probs=109.6
Q ss_pred ccCceEEEEEEEEEEEeeecCceeE-EEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 33 HEGITRHYKFHIKMQNITRLCQTKS-IVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 33 ~~~~~~~~~l~~~~~~~~~~g~~~~-~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
..|.+++|+|++++. ++|.... .+.+||++|||+|++++||+|+|+|+|.++++++|||||+++. .++||++ +
T Consensus 44 ~~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~ 117 (343)
T 3cg8_A 44 AGGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-M 117 (343)
T ss_dssp -CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-T
T ss_pred CCCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-c
Confidence 478889999999875 3443221 2234899999999999999999999999999999999999988 4599999 8
Q ss_pred CccccCCCCeEEEEEEEcc------------cCcceeEeecccc------cc-ccceEeEEEeCCCCCCCCCCCCCccee
Q 008592 112 TQCPIQTGQSYVYNFTVTG------------QRGTLFWHAHISW------LR-ATLYGPIIILPKQQASYPFPQPFEEVP 172 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~ 172 (560)
+||+|.||++|+|+|++.+ ++||||||||.++ +. +||+|+|||+++.+.. .|+|++
T Consensus 118 t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~~-----pd~e~~ 192 (343)
T 3cg8_A 118 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHT 192 (343)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEE
T ss_pred ccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCCC-----CCceEE
Confidence 9999999999999999832 3599999999743 33 7999999999876431 367787
Q ss_pred EEeeec
Q 008592 173 IIFGEW 178 (560)
Q Consensus 173 l~~~d~ 178 (560)
|+++||
T Consensus 193 l~~~d~ 198 (343)
T 3cg8_A 193 IVFNDM 198 (343)
T ss_dssp EEEETT
T ss_pred EEcccc
Confidence 777653
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-46 Score=429.82 Aligned_cols=253 Identities=17% Similarity=0.224 Sum_probs=183.3
Q ss_pred cCceEEEEEEEEEEEeeecC--c--------------------------eeEEE-------EECCC--------CCCcEE
Q 008592 34 EGITRHYKFHIKMQNITRLC--Q--------------------------TKSIV-------TVNGQ--------FPGPRI 70 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~~g--~--------------------------~~~~~-------~~ng~--------~pGP~i 70 (560)
.+++|+|.+.|.+..++... . .+++. +||+. +|||+|
T Consensus 18 ~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PGP~I 97 (1065)
T 2j5w_A 18 WAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLGPII 97 (1065)
T ss_dssp --CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSCCCE
T ss_pred ccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcCCeE
Confidence 47899999999998877431 1 22233 57877 999999
Q ss_pred EEecCCEEEEEEEeCCCcCeeEEecCcccC----CCcCCCCCCC--cCccccCCCCeEEEEEEEccc---------Ccce
Q 008592 71 IAREGDRLLIRVINNVKYNVTIHWHGVRQL----RSGWADGPAY--VTQCPIQTGQSYVYNFTVTGQ---------RGTL 135 (560)
Q Consensus 71 ~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~----~~~~~DGv~~--~tq~~i~pG~~~~Y~~~~~~~---------~Gt~ 135 (560)
|+++||+|+|+|+|+|+++++|||||++++ +.+|+||+++ +|||+|+||++|+|+|+++++ +|||
T Consensus 98 r~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~aGT~ 177 (1065)
T 2j5w_A 98 KAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTR 177 (1065)
T ss_dssp EEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSEEEE
T ss_pred EEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCceEE
Confidence 999999999999999999999999999997 4477888888 899999999999999999544 4999
Q ss_pred eEeecccccc---ccceEeEEEeCCCCCCCCCC-CCCcceeEEee------eccccChHHHHHHHHhcCCC-------CC
Q 008592 136 FWHAHISWLR---ATLYGPIIILPKQQASYPFP-QPFEEVPIIFG------EWWKADTETIINEAMQTGGA-------PN 198 (560)
Q Consensus 136 wYH~H~~~~~---~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~~~------d~~~~~~~~~~~~~~~~~~~-------~~ 198 (560)
|||||.+.++ +||+|+|||++++...++.+ ..|+|++|+|+ ||++......+. ...+.. ..
T Consensus 178 wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~--~~p~~~~~~~~~~~~ 255 (1065)
T 2j5w_A 178 IYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC--SEPEKVDKDNEDFQQ 255 (1065)
T ss_dssp EEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHC--SCGGGCCTTCHHHHH
T ss_pred EEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhh--cCccccccccccccc
Confidence 9999999875 89999999999875433322 35789999999 555543211110 000000 01
Q ss_pred CCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCC-CeEEEEEcCCeEEE--EEeCCCccCCC---------
Q 008592 199 ISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALN-DELFFSIANHTLTI--VETDAVYAKSK--------- 266 (560)
Q Consensus 199 ~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~-~~~~~~i~gh~~~v--ia~DG~~v~p~--------- 266 (560)
.++.++|||+... ..+.+++++|++|||||||+|.. ..+.|+|+||+|+| ..+|-..+.|.
T Consensus 256 ~~~~~~iNG~~~~-------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v~p~~~dtv~I~pGer~dVlv~~ 328 (1065)
T 2j5w_A 256 SNRMYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTNKNYRIDTINLFPATLFDAYMVA 328 (1065)
T ss_dssp HTEEEEETTEETT-------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEETTEEESEEEECBTCEEEEEEEC
T ss_pred cCcEEEECCccCC-------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEECCeeecEEEECCCcEEEEEEEe
Confidence 2457999999741 34689999999999999999976 58999999999994 22233333331
Q ss_pred CCCceEEEEeccCCCCCCcCCCcceEEEEEecCC
Q 008592 267 APNANFLIAARPYATGPASFDNTTTAGVLEYDQP 300 (560)
Q Consensus 267 ~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 300 (560)
..+|.|+|++...... .....+.+.+.+.
T Consensus 329 ~~pG~y~i~~h~~~h~-----~~Gm~~~~~V~~~ 357 (1065)
T 2j5w_A 329 QNPGEWMLSCQNLNHL-----KAGLQAFFQVQEC 357 (1065)
T ss_dssp CSCEEEEEEECSHHHH-----HTTCEEEEEEECS
T ss_pred CCCeeEEEEecCcchh-----hCCCEEEEEEecC
Confidence 1246777776532110 1234667777764
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=423.27 Aligned_cols=404 Identities=13% Similarity=0.151 Sum_probs=246.8
Q ss_pred ceeEEEEECCCCCC--cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCC-CcCCCCCCCcCccccCCCCeEEEEEEEcc
Q 008592 54 QTKSIVTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLR-SGWADGPAYVTQCPIQTGQSYVYNFTVTG 130 (560)
Q Consensus 54 ~~~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~-~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~ 130 (560)
.++.+.++||++|| |+|++++||+|+|+|.|. .+.+||||+++.+ +.|+||++.+| |+|.||.+++|+|.+ .
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 47789999999999 889999999999999975 3459999999999 89999999999 999999999999998 7
Q ss_pred cCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEe----eeccccChHHHHHHHHh-cCCCCCCCceEE
Q 008592 131 QRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIF----GEWWKADTETIINEAMQ-TGGAPNISDAFT 204 (560)
Q Consensus 131 ~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~~-~~~~~~~~d~~l 204 (560)
++||||||||...++ +||+|+|+|++......++..++.|.+++| .||++.....+...+.. .+.. +...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999987 899999999987554444445678899999 89999887765443221 1211 23333
Q ss_pred EcCcCC----------------CCCCC----------CCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEe
Q 008592 205 INGLPG----------------PFYNC----------AAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVET 258 (560)
Q Consensus 205 vNG~~~----------------~~~~~----------~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~ 258 (560)
+|+... ..|+. .+-..|+|.+++|+++++||+|.. ...+.++.+| +.+...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~-~~~~sih~HG--l~~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHG--VQTESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECS-SSCBCCEESS--CBCSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCC-CCCceEeecc--ccccCC
Confidence 443211 01211 012347899999999999999996 4556666666 444444
Q ss_pred CCCccCCCCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccc-c
Q 008592 259 DAVYAKSKAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSL-A 337 (560)
Q Consensus 259 DG~~v~p~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~ 337 (560)
++..+.|.+. -+|...+.... ... .....-+..-|-..... ...+...|..+ .
T Consensus 845 ~~~~i~PG~~-~ty~~~~~~~~-gp~--~~~~~~gt~wYhsh~~~----------------------~~q~~~GL~G~li 898 (1065)
T 2j5w_A 845 TVTPTLPGET-LTYVWKIPERS-GAG--TEDSACIPWAYYSTVDQ----------------------VKDLYSGLIGPLI 898 (1065)
T ss_dssp CCCCBCTTCE-EEEEEECCGGG-SCC--TTSCSEEEEEEECCTTH----------------------HHHHHTTCEEEEE
T ss_pred CCceeCCCCe-EEEEEEecCcc-CCc--cccCCceEEEEecCCCh----------------------HHhhhccccceeE
Confidence 4333444221 12322221100 000 00000111111110000 00000000000 0
Q ss_pred c-CCC---CCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccC-C-chhhhHHhhccCCCCcccCCC
Q 008592 338 T-AKF---PAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQ-P-NVALLQAHFFNRSKGVYTTDF 411 (560)
Q Consensus 338 ~-~~~---p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~-p-~~~~l~~~~~~~~~g~~~~~~ 411 (560)
. +.. +...+.+.+..+.+.. +.. +.. .....|..+|.. | ..+++...+..
T Consensus 899 V~~~~~l~~~~~~~d~D~~l~~~~-~d~------------~~~-~y~~~n~~~~~~~P~~v~~~~~~~~~---------- 954 (1065)
T 2j5w_A 899 VCRRPYLKVFNPRRKLEFALLFLV-FDE------------NES-WYLDDNIKTYSDHPEKVNKDDEEFIE---------- 954 (1065)
T ss_dssp EECCC-----CCCCEEEEEEEEEE-EEG------------GGS-TTHHHHHHHHCSCGGGCCTTCHHHHH----------
T ss_pred ecCcccccccCCCcceEEEEEEEe-ecC------------Ccc-eeeccCcccccCCccccCcchhhhhc----------
Confidence 0 000 0001111121111110 000 000 000112222210 1 01111000000
Q ss_pred CCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCC
Q 008592 412 PANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNL 491 (560)
Q Consensus 412 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~ 491 (560)
.+..+..++. .......+.++.|++|+|+|.|.+. ..+.||||||||.|+|++++
T Consensus 955 ---~~~~~~iNG~------~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~~F~vv~~~--------------- 1009 (1065)
T 2j5w_A 955 ---SNKMHAINGR------MFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRG--------------- 1009 (1065)
T ss_dssp ---HTEEEEETTB------CTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTTT---------------
T ss_pred ---cCceEEECCc------cCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEcccEEEEEecC---------------
Confidence 0000111110 1112345789999999999999752 24799999999999998652
Q ss_pred CCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCC
Q 008592 492 VDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 492 ~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
|.|||||.|+|+++++|+|++||||.|+||||+++|++.|||+.|.|.+.++
T Consensus 1010 --p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1010 --VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp --CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred --CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 6899999999999999999999999999999999999999999999987654
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=384.05 Aligned_cols=390 Identities=15% Similarity=0.119 Sum_probs=241.9
Q ss_pred hccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 32 KHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
...+.++++++.++...+..+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .
T Consensus 23 ~~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~ 87 (447)
T 2dv6_A 23 AHAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------R 87 (447)
T ss_dssp -CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------E
T ss_pred cCCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------c
Confidence 3456777888777654455444 456999999 999999999999999999998889999998642 2
Q ss_pred CccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCC-----CCCCcceeEEeeeccccChHH
Q 008592 112 TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPF-----PQPFEEVPIIFGEWWKADTET 185 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~-----~~~~~e~~l~~~d~~~~~~~~ 185 (560)
+||+|+||++++|+|++ .++||||||||..+++ +||+|.|+|+++....++. .....+++..+ |+.......
T Consensus 88 ~~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~ 165 (447)
T 2dv6_A 88 SAIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVR 165 (447)
T ss_dssp CCCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEE
T ss_pred cceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEE
Confidence 67999999999999998 6799999999998877 7999999999876432210 00001111111 110000000
Q ss_pred H-H--HHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCC-CCeEEEEEcCCeEEEEEeCCC
Q 008592 186 I-I--NEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAAL-NDELFFSIANHTLTIVETDAV 261 (560)
Q Consensus 186 ~-~--~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG~ 261 (560)
+ + ......-......+.+++||+. ..+.+++++|++|||||+|.+. ...+.++++|. ++.||.
T Consensus 166 ~~l~~~~~~~~~~~g~~~~~~~~NG~~---------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~ 232 (447)
T 2dv6_A 166 IDLETVEVKGQLDDNTTYTYWTFNGKV---------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGA 232 (447)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTBB---------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGG
T ss_pred EEEEEEEEEEeccCCceeEEEEECCcc---------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCC
Confidence 0 0 0000000001124678999984 2368999999999999999985 34577777774 368997
Q ss_pred c----cCCC---------CCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 008592 262 Y----AKSK---------APNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQ 328 (560)
Q Consensus 262 ~----v~p~---------~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 328 (560)
+ +.|. ..+|+||+++....... .. .....+.+.+.... .+|.....
T Consensus 233 ~~~~~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~-~~-~~Gl~g~l~v~~~~--------------~~P~~d~~----- 291 (447)
T 2dv6_A 233 AAFTQTDPGEETVVTFKALIPGIYVYHCATPSVPT-HI-TNGMYGLLLVEPEG--------------GLPQVDRE----- 291 (447)
T ss_dssp GGGCCBCTTCEEEEEEECCSCEEEEEECCSSSHHH-HH-HTTCEEEEEEECTT--------------CSCCCSEE-----
T ss_pred CccEEeCCCCEEEEEEECCCCeEEEEEeCCCChHH-HH-hCCCEEEEEEeCCC--------------CCCCCCee-----
Confidence 4 3331 12467777765310000 00 01234555555321 01111100
Q ss_pred hcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCccc
Q 008592 329 FSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYT 408 (560)
Q Consensus 329 ~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~ 408 (560)
+.-.+....... . . ...... .+..... . ......|.+||+.+...
T Consensus 292 ~~~~~~~~~~~~-~--~--~~~g~~--~~~~~~~--------~--~~~~~~~~iNG~~~~~~------------------ 336 (447)
T 2dv6_A 292 FYVMQGEIYTVK-S--F--GTSGEQ--EMDYEKL--------I--NEKPEYFLFNGSVGSLT------------------ 336 (447)
T ss_dssp EEEEEEEECBSS-C--T--TCCEEC--CBBHHHH--------H--TTCCSEEEETTSTTCCC------------------
T ss_pred EEEEecccccCC-c--c--cccccc--cCChHHh--------h--ccCCCEEEECCcccCCC------------------
Confidence 000000000000 0 0 000000 0000000 0 00011345665432100
Q ss_pred CCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCC
Q 008592 409 TDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAK 488 (560)
Q Consensus 409 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~ 488 (560)
...++.++.|++++|+|.|.+. ...||||||||+|+||+++.+ +
T Consensus 337 -------------------------~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~dG~-~-------- 380 (447)
T 2dv6_A 337 -------------------------RSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSLGS-V-------- 380 (447)
T ss_dssp -------------------------CCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGGGC-S--------
T ss_pred -------------------------CCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcCCc-c--------
Confidence 0134788999999999999652 468999999999999998532 1
Q ss_pred CCCCCCC-ccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCC
Q 008592 489 FNLVDPA-ERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 489 ~~~~~p~-~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
...|. +|||+.|+||++++|+|+++|||.|+||||+++|++.||+++|.|.....
T Consensus 381 --~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 381 --VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp --SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred --cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 12344 79999999999999999999999999999999999999999999976643
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=392.62 Aligned_cols=143 Identities=21% Similarity=0.287 Sum_probs=104.9
Q ss_pred cCceEEEEEEEEEEEeeec-------------C-ceeE--EEEE----------------CCCCCCcEEEEecCCEEEEE
Q 008592 34 EGITRHYKFHIKMQNITRL-------------C-QTKS--IVTV----------------NGQFPGPRIIAREGDRLLIR 81 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~~-------------g-~~~~--~~~~----------------ng~~pGP~i~~~~Gd~v~v~ 81 (560)
.+.+|+|.+-+++..+... | .-++ ...| ++++|||+|++++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4789999999999887744 1 1111 2344 34789999999999999999
Q ss_pred EEeCCCcCeeEEecCcccCCCcCCCCCCCcC--------ccccCCCCeEEEEEEEccc-----Cc----ceeEeecccc-
Q 008592 82 VINNVKYNVTIHWHGVRQLRSGWADGPAYVT--------QCPIQTGQSYVYNFTVTGQ-----RG----TLFWHAHISW- 143 (560)
Q Consensus 82 ~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~t--------q~~i~pG~~~~Y~~~~~~~-----~G----t~wYH~H~~~- 143 (560)
|+|.|+++++|||||+++... +||+|+++ ||+|+||++|+|+|+++++ +| |||||||.+.
T Consensus 83 ~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 999999999999999999754 99999887 9999999999999999654 57 9999999975
Q ss_pred -cc-ccceEeEEEeCCCCCCC--CCCCCCcceeEEeeec
Q 008592 144 -LR-ATLYGPIIILPKQQASY--PFPQPFEEVPIIFGEW 178 (560)
Q Consensus 144 -~~-~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~d~ 178 (560)
|. +||+|+|||+++..... ..+..++|++|+|+||
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~ 199 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVF 199 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEE
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEee
Confidence 33 79999999999764321 1223468999999954
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=352.91 Aligned_cols=219 Identities=19% Similarity=0.231 Sum_probs=166.4
Q ss_pred hhhccCceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCC
Q 008592 30 LAKHEGITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGP 108 (560)
Q Consensus 30 ~~~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv 108 (560)
.+++.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.
T Consensus 25 ~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~ 101 (333)
T 1mzy_A 25 VAASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGG 101 (333)
T ss_dssp SCSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGG
T ss_pred ccCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCC
Confidence 3467889999999999999887 5999999999999999999999999999999999 47899999998875446666
Q ss_pred CCcCccccCCCCeEEEEEEEcccCcceeEeecccc-----cc-ccceEeEEEeCCCCCC----CCCCCCCcceeEEeeec
Q 008592 109 AYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW-----LR-ATLYGPIIILPKQQAS----YPFPQPFEEVPIIFGEW 178 (560)
Q Consensus 109 ~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~-----~~-~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~ 178 (560)
++++| |+||++++|+|++ +++||||||||.++ |. +||+|+|||++++... .+. .+|+|++|+++||
T Consensus 102 ~~~~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~ 177 (333)
T 1mzy_A 102 GGLTL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDH 177 (333)
T ss_dssp GGGCC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEE
T ss_pred CceeE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeee
Confidence 66764 9999999999998 78999999999974 54 8999999999765321 111 3488999999999
Q ss_pred cccC--hHHH---------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEE
Q 008592 179 WKAD--TETI---------INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFS 247 (560)
Q Consensus 179 ~~~~--~~~~---------~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~ 247 (560)
++.. ...+ +....... ....++.++|||+.+++. ..+.+++++|++||||++|++....+ ..
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~ 250 (333)
T 1mzy_A 178 YIPKDEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HL 250 (333)
T ss_dssp CCCBCTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EE
T ss_pred ccCccccccccccccccccccchhHHh-hccCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EE
Confidence 8831 1110 00000000 113569999999975421 14579999999888777666543334 23
Q ss_pred EcCCeEEEEEeCCCcc
Q 008592 248 IANHTLTIVETDAVYA 263 (560)
Q Consensus 248 i~gh~~~via~DG~~v 263 (560)
+++|.++||+ ||.++
T Consensus 251 i~~h~~~Vi~-dG~~~ 265 (333)
T 1mzy_A 251 IGGHGDLVWE-TGKFH 265 (333)
T ss_dssp ETCCEEEEET-TCCTT
T ss_pred ECCCCeEEEe-CCccc
Confidence 7788888877 76544
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=361.19 Aligned_cols=119 Identities=18% Similarity=0.336 Sum_probs=95.9
Q ss_pred EEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc------C--ccccCCCCeEEEEEEE
Q 008592 57 SIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV------T--QCPIQTGQSYVYNFTV 128 (560)
Q Consensus 57 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~------t--q~~i~pG~~~~Y~~~~ 128 (560)
...++| ++|||+|++++||+|+|+|+|.++++++|||||++.... +||++.. + ||+|+||++|+|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 345678 689999999999999999999999999999999996544 6665543 3 7999999999999998
Q ss_pred cccC---------cceeEeecccc--cc-ccceEeEEEeCCCCCCC-CC-CCCCcceeEEeeec
Q 008592 129 TGQR---------GTLFWHAHISW--LR-ATLYGPIIILPKQQASY-PF-PQPFEEVPIIFGEW 178 (560)
Q Consensus 129 ~~~~---------Gt~wYH~H~~~--~~-~Gl~G~liV~~~~~~~~-~~-~~~~~e~~l~~~d~ 178 (560)
++++ ||||||||... |. +||+|+|||+++..... +. ...++|++|+++||
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~ 190 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVF 190 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEE
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEec
Confidence 5443 79999999876 43 89999999998743111 11 13478999999986
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=398.56 Aligned_cols=144 Identities=13% Similarity=0.159 Sum_probs=116.5
Q ss_pred ccCceEEEEEEEEEEEe--eecCc----------------eeEE-EEE-----CC-----------CCCCcEEEEecCCE
Q 008592 33 HEGITRHYKFHIKMQNI--TRLCQ----------------TKSI-VTV-----NG-----------QFPGPRIIAREGDR 77 (560)
Q Consensus 33 ~~~~~~~~~l~~~~~~~--~~~g~----------------~~~~-~~~-----ng-----------~~pGP~i~~~~Gd~ 77 (560)
..|.+|+|.|.+++..+ .|++. .+.+ +.| ++ ++|||+||+++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 47899999999999774 45542 1122 333 23 58999999999999
Q ss_pred EEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcc---------cCcceeEeeccccc--c-
Q 008592 78 LLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTG---------QRGTLFWHAHISWL--R- 145 (560)
Q Consensus 78 v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~---------~~Gt~wYH~H~~~~--~- 145 (560)
|+|+|+|.++++++|||||+++....+ ||+++ +||+|+||++|+|+|++++ ++||||||||.+.+ .
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~ 286 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVH 286 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHH
T ss_pred EEEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHh
Confidence 999999999999999999999998852 69998 9999999999999999854 89999999999874 3
Q ss_pred ccceEeEEEeCCCCCCC--CCCCCCcceeEEeeec
Q 008592 146 ATLYGPIIILPKQQASY--PFPQPFEEVPIIFGEW 178 (560)
Q Consensus 146 ~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~d~ 178 (560)
+||+|+|||+++..... .....++|++|+++++
T Consensus 287 ~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~ 321 (770)
T 2r7e_B 287 SGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIF 321 (770)
T ss_dssp TSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEE
T ss_pred CCceeeEEECCCcccccccCCCccceEEEEEEeec
Confidence 89999999998764321 1123578998887654
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-42 Score=347.43 Aligned_cols=243 Identities=19% Similarity=0.262 Sum_probs=194.0
Q ss_pred hccCceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADGP 108 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DGv 108 (560)
.+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.. +||+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCC
Confidence 45788899999999999987 799999999999999999999999999999999996 589999999852 7888
Q ss_pred CCcCccccCCCCeEEEEEEEcccCcceeEeecccc---cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChH
Q 008592 109 AYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW---LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTE 184 (560)
Q Consensus 109 ~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~ 184 (560)
+..+ .|.||++++|+|++ +++||||||||.+. +. +||+|+|||++++. ++..|+|++++++||+++...
T Consensus 108 ~~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~ 180 (327)
T 1kbv_A 108 AAAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKK 180 (327)
T ss_dssp TTTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCT
T ss_pred Ccce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCcc
Confidence 7543 59999999999998 78999999999753 33 89999999998653 234688999999999987521
Q ss_pred HH-------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEE
Q 008592 185 TI-------INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVE 257 (560)
Q Consensus 185 ~~-------~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via 257 (560)
.. ..... + ..++.++|||+.+++.. .+.+++++|++|||||||+|..+.+.|+|+||+|+||+
T Consensus 181 ~~~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~ 250 (327)
T 1kbv_A 181 GAQGLQPFDMDKAV--A---EQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVY 250 (327)
T ss_dssp TCCEEECBCHHHHH--H---TCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEE
T ss_pred ccccccccChhHhc--c---CCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEE
Confidence 00 01111 1 24689999999875422 25799999999999999999888999999999999999
Q ss_pred eCCCccCCC-------------------CCCceEEEEeccCCCCCCcCCCcceEEEEEecCC
Q 008592 258 TDAVYAKSK-------------------APNANFLIAARPYATGPASFDNTTTAGVLEYDQP 300 (560)
Q Consensus 258 ~DG~~v~p~-------------------~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 300 (560)
.||++++|. ..+|+|++++...... ......|+|+|++.
T Consensus 251 ~DG~~~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~----~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 251 VEGGKLINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRA----FNKGALGQLKVEGA 308 (327)
T ss_dssp GGGSSCEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHH----HHSSCEEEEEEESC
T ss_pred cCCCcCCCCceeEEEECCCCEEEEEEEeCCCeEEEEEecccccc----ccCCcEEEEEECCC
Confidence 999988761 1235566655432110 12245899999875
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=347.35 Aligned_cols=143 Identities=19% Similarity=0.284 Sum_probs=119.7
Q ss_pred hccCceEEEEEEEEEEEeee--cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNITR--LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA 109 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~--~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~ 109 (560)
++.+.+++|+|++++..++. ||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 55778999999999998884 59999999999999999999999999999999998 77999999887654344545
Q ss_pred CcCccccCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCC----CCCCCCCcceeEEeeeccc
Q 008592 110 YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQAS----YPFPQPFEEVPIIFGEWWK 180 (560)
Q Consensus 110 ~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~ 180 (560)
.++| |.||++++|+|++ .++||||||||.++ |. +||+|+|||++++... .+. .+++|++|+++||++
T Consensus 110 ~~~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALTQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cceE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 5654 9999999999998 68999999999874 44 8999999999865311 111 357899999999997
Q ss_pred c
Q 008592 181 A 181 (560)
Q Consensus 181 ~ 181 (560)
.
T Consensus 186 ~ 186 (340)
T 2bw4_A 186 P 186 (340)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=333.61 Aligned_cols=217 Identities=20% Similarity=0.264 Sum_probs=160.8
Q ss_pred hccCceEEEEEEEEEEEee--ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNIT--RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA 109 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~ 109 (560)
.+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~ 103 (336)
T 1oe1_A 27 KSGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGA 103 (336)
T ss_dssp CCCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCc
Confidence 3467889999999998876 5599999999999999999999999999999999973 4566666665555677777
Q ss_pred CcCccccCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCC--C-CCCCcceeEEeeecccc
Q 008592 110 YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYP--F-PQPFEEVPIIFGEWWKA 181 (560)
Q Consensus 110 ~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~--~-~~~~~e~~l~~~d~~~~ 181 (560)
.++| |.||++++|+|++ +++||||||||.++ |. +||+|+|||++++....+ . ..+|+|++|+++||++.
T Consensus 104 ~~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~ 180 (336)
T 1oe1_A 104 KLTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIP 180 (336)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCC
T ss_pred ceEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeec
Confidence 7775 9999999999998 78999999999975 33 899999999986532111 1 13588999999999884
Q ss_pred Ch--HHH---------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEE-EEEc
Q 008592 182 DT--ETI---------INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELF-FSIA 249 (560)
Q Consensus 182 ~~--~~~---------~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~-~~i~ 249 (560)
.. ..+ +....... ....++.++|||+.+++. ..+.+++++|++||| +|++..+.+. +.|+
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i~ 252 (336)
T 1oe1_A 181 KGPDGKYKDYATLAESYGDTVQVM-RTLTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLIG 252 (336)
T ss_dssp BCTTSSBCCCSSTGGGHHHHHHHH-HTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEETT
T ss_pred cccCCceeecccccccccchhhHh-hcCCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEEC
Confidence 11 110 00000000 013568999999976431 136899999997665 6666555544 4458
Q ss_pred CCeEEEEEeCCCcc
Q 008592 250 NHTLTIVETDAVYA 263 (560)
Q Consensus 250 gh~~~via~DG~~v 263 (560)
+|.|+|++ ||.++
T Consensus 253 gh~~~Vi~-DG~~~ 265 (336)
T 1oe1_A 253 GHGDWVWE-TGKFA 265 (336)
T ss_dssp CCEEEEET-TCCTT
T ss_pred CcCceEeC-CCcCc
Confidence 89888886 87655
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=342.47 Aligned_cols=247 Identities=18% Similarity=0.205 Sum_probs=194.1
Q ss_pred hhccCceEEEEEEEEEEEee-ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCC
Q 008592 31 AKHEGITRHYKFHIKMQNIT-RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADG 107 (560)
Q Consensus 31 ~~~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DG 107 (560)
.++.+.+++|+|++++..++ .+|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+++ +||
T Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG 96 (442)
T 2zoo_A 22 NRDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGG 96 (442)
T ss_dssp CCSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGG
T ss_pred ccCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCC
Confidence 35678899999999999998 5899999999999999999999999999999999986 599999999874 688
Q ss_pred CCCcCccccCCCCeEEEEEEEcccCcceeEeecccc---cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccCh
Q 008592 108 PAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW---LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADT 183 (560)
Q Consensus 108 v~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~ 183 (560)
++..+ +|.||++++|+|++ +++||||||||.++ +. +||+|+|||++++.. +.+++|++|+++||++...
T Consensus 97 ~~~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~ 169 (442)
T 2zoo_A 97 GAESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGE 169 (442)
T ss_dssp GGGGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSC
T ss_pred CCccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCc
Confidence 77643 69999999999998 78999999998643 33 899999999976532 2458999999999998754
Q ss_pred HHH-----HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEe
Q 008592 184 ETI-----INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVET 258 (560)
Q Consensus 184 ~~~-----~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~ 258 (560)
... +...... ...+++++|||+..++. ..+.+++++|++|||||+|+|....+.|+|+||+|+||+.
T Consensus 170 ~~~~~~~~~~~~~~~---~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~ 241 (442)
T 2zoo_A 170 FGEAGLQPFDMAKAI---DEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYV 241 (442)
T ss_dssp TTCCEEECBCHHHHH---TTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEG
T ss_pred ccccccccCChhHhc---cCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEec
Confidence 110 0000001 13569999999975321 1257999999999999999998889999999999999999
Q ss_pred CCCccCCC-------------------CCCceEEEEeccCCCCCCcCCCcceEEEEEecCCC
Q 008592 259 DAVYAKSK-------------------APNANFLIAARPYATGPASFDNTTTAGVLEYDQPN 301 (560)
Q Consensus 259 DG~~v~p~-------------------~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 301 (560)
||.+++|. ..+|+|++++..... .......++++|.+..
T Consensus 242 DG~~~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~----~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 242 EGGSLKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFR----AFNKGALAMLKVEGPD 299 (442)
T ss_dssp GGSSCEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHH----HHTTSCEEEEEEESCC
T ss_pred CCccCCCccceEEEECCCeeEEEEEEcCCCCeEEEEeccccc----ccccCceEEEEecCCC
Confidence 99988761 123555555543211 0123467899998764
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=291.20 Aligned_cols=210 Identities=20% Similarity=0.250 Sum_probs=169.9
Q ss_pred cCceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCCCCC
Q 008592 34 EGITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADGPAY 110 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DGv~~ 110 (560)
.+.++.|+|++.+..... +|..+.+|+|||++|||+|++++||+++|+|.|.+. ..++|||||+.. +||++.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCc
Confidence 456778888887766665 588889999999999999999999999999999985 579999999852 799886
Q ss_pred cCccccCCCCeEEEEEEEcccCcceeEeeccc---ccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHH
Q 008592 111 VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHIS---WLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETI 186 (560)
Q Consensus 111 ~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 186 (560)
.+| |.||++++|.|++ +++||||||||.. .+. .||+|+|+|+++.. ++..++|++++++||++......
T Consensus 235 ~~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~ 307 (447)
T 2dv6_A 235 FTQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGT 307 (447)
T ss_dssp GCC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTC
T ss_pred cEE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCcccc
Confidence 654 9999999999998 6899999999974 233 89999999997643 23457889999999987532100
Q ss_pred -------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeC
Q 008592 187 -------INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETD 259 (560)
Q Consensus 187 -------~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~D 259 (560)
..... + ..++.++|||+..++.. ...+++++|++|||||+|++....+.|+|+||.|+||+.|
T Consensus 308 ~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~d 377 (447)
T 2dv6_A 308 SGEQEMDYEKLI--N---EKPEYFLFNGSVGSLTR-----SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSL 377 (447)
T ss_dssp CEECCBBHHHHH--T---TCCSEEEETTSTTCCCC-----CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGG
T ss_pred cccccCChHHhh--c---cCCCEEEECCcccCCCC-----CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcC
Confidence 01111 1 23588999999865321 2479999999999999999988899999999999999999
Q ss_pred CCccCC
Q 008592 260 AVYAKS 265 (560)
Q Consensus 260 G~~v~p 265 (560)
|.++++
T Consensus 378 G~~~~~ 383 (447)
T 2dv6_A 378 GSVVSP 383 (447)
T ss_dssp GCSSSC
T ss_pred CcccCC
Confidence 998865
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-31 Score=293.51 Aligned_cols=181 Identities=22% Similarity=0.304 Sum_probs=137.0
Q ss_pred CCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCC-----CCCCcCccccCCCCeEEEEEEEcccCc-----
Q 008592 64 QFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWAD-----GPAYVTQCPIQTGQSYVYNFTVTGQRG----- 133 (560)
Q Consensus 64 ~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~D-----Gv~~~tq~~i~pG~~~~Y~~~~~~~~G----- 133 (560)
.+|||+||+++||+|+|+|+|.++++++|||||+++. .+|+| |+++++||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999985 45665 567788999999999999999966554
Q ss_pred ----ceeEeecccccc---ccceEeEEEeCCCCCC-CC-CCCCCcceeEEeee------ccccChHHHHHHHHhcC-CC-
Q 008592 134 ----TLFWHAHISWLR---ATLYGPIIILPKQQAS-YP-FPQPFEEVPIIFGE------WWKADTETIINEAMQTG-GA- 196 (560)
Q Consensus 134 ----t~wYH~H~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~~~-~~- 196 (560)
|||||||.+.+. +||+|+|||+++.... .. ....|+|++|++++ |++.... ..+.... ..
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~---~~~~~~p~~v~ 603 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENI---QRFLPNPAGVQ 603 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHH---HHHSSSSSCSC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccch---hhcccCchhcc
Confidence 999999998753 7999999999875321 11 11357899999965 4443211 1111000 00
Q ss_pred ------CCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCC-CeEEEEEcCCeEEEE
Q 008592 197 ------PNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALN-DELFFSIANHTLTIV 256 (560)
Q Consensus 197 ------~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~-~~~~~~i~gh~~~vi 256 (560)
......++|||+... + . .+.+++|++|||||||++.. ..+.|||+||.|+|+
T Consensus 604 ~~~~~~~~~~~~~~ING~~~~----~---~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~ 662 (742)
T 2r7e_A 604 LEDPEFQASNIMHSINGYVFD----S---L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK 662 (742)
T ss_dssp CCCHHHHGGGCCBCTTTTCSS----C---C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB
T ss_pred cccccccccCceeeecCcCCC----C---C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe
Confidence 001234789999642 1 2 38999999999999998754 468999999999997
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-16 Score=161.36 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=82.5
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
+.+.++.|++++|+|.|.+. ...|+||||||.|+|++...+. ..|.++|++.|.||+.+.|.|+++
T Consensus 214 ~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~~------------~~p~~~d~l~l~pGer~dv~v~~~ 279 (327)
T 1kbv_A 214 NALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGGK------------LINENVQSTIVPAGGSAIVEFKVD 279 (327)
T ss_dssp GCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEEEEEEC
T ss_pred eeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCCc------------CCCCceeEEEECCCCEEEEEEEeC
Confidence 34788999999999999652 4689999999999999985331 236789999999999999999999
Q ss_pred CceeeEEEeechhhh-hcccEEEEEEcCCC
Q 008592 516 NPGVWFMHCHLEVHT-SWGLKMAWIVNDGK 544 (560)
Q Consensus 516 npG~w~~HCHil~H~-d~GMm~~~~V~~~~ 544 (560)
+||.|.+|||+++|. ..||++.+.|....
T Consensus 280 ~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 280 IPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp SCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 999999999999995 89999999997654
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.9e-14 Score=147.82 Aligned_cols=94 Identities=17% Similarity=0.194 Sum_probs=81.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++++|.|.|.+. ...|+||+||+.|+|++...+ +..|.+.|++.|.||+...|.|++++
T Consensus 205 ~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG~------------~~~p~~~~~~~l~pg~r~~v~v~~~~ 270 (442)
T 2zoo_A 205 SLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEGG------------SLKNHNVQTTLIPAGGAAIVEFKVEV 270 (442)
T ss_dssp CEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGS------------SCEECSBSEEEECTTEEEEEEEECCS
T ss_pred ceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCCc------------cCCCccceEEEECCCeeEEEEEEcCC
Confidence 4788999999999999652 368999999999999998532 12267899999999999999999999
Q ss_pred ceeeEEEeechhh-hhcccEEEEEEcCCC
Q 008592 517 PGVWFMHCHLEVH-TSWGLKMAWIVNDGK 544 (560)
Q Consensus 517 pG~w~~HCHil~H-~d~GMm~~~~V~~~~ 544 (560)
||.|.+|||.+.| .+.||+..|.|....
T Consensus 271 ~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 271 PGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp CEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred CCeEEEEecccccccccCceEEEEecCCC
Confidence 9999999999999 599999999997654
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.5e-15 Score=127.31 Aligned_cols=90 Identities=21% Similarity=0.194 Sum_probs=71.3
Q ss_pred CCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCC--cCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeec
Q 008592 63 GQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRS--GWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAH 140 (560)
Q Consensus 63 g~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H 140 (560)
-+|++|+|++++||+|+ ++|.++.++++||||...+.. ..+||.+ .+++.|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 36778999999999975 579998999999999876531 1133332 356789999999999986568999999999
Q ss_pred cccccccceEeEEEeC
Q 008592 141 ISWLRATLYGPIIILP 156 (560)
Q Consensus 141 ~~~~~~Gl~G~liV~~ 156 (560)
.| ..+||.|.|+|++
T Consensus 91 ~H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PH-RGAGMVGKITVEG 105 (105)
T ss_dssp TT-GGGTCEEEEEECC
T ss_pred Cc-hhcCCEEEEEEcC
Confidence 43 2479999999974
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=7.7e-14 Score=137.71 Aligned_cols=100 Identities=22% Similarity=0.358 Sum_probs=84.2
Q ss_pred EEECCCC--CCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCC--------CCcCccccCCCCeEEEEEEE
Q 008592 59 VTVNGQF--PGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGP--------AYVTQCPIQTGQSYVYNFTV 128 (560)
Q Consensus 59 ~~~ng~~--pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv--------~~~tq~~i~pG~~~~Y~~~~ 128 (560)
|+|||+. ++|.|++++||+|+++|.|.....+++||||...... .||. .....+.|.||++++|+|.+
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6999998 8899999999999999999999999999999766543 3442 12455779999999999997
Q ss_pred cc--cCcceeEeecccccc-ccceEeEEEeCCCCC
Q 008592 129 TG--QRGTLFWHAHISWLR-ATLYGPIIILPKQQA 160 (560)
Q Consensus 129 ~~--~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~ 160 (560)
.+ .+|+||||||...+. .||.|.|+|+++++.
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~~ 269 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 269 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCCC
Confidence 32 699999999987765 899999999988653
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-12 Score=111.15 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=81.4
Q ss_pred EEEEEEEEEEEee-----ecCceeEE-EEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 38 RHYKFHIKMQNIT-----RLCQTKSI-VTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 38 ~~~~l~~~~~~~~-----~~g~~~~~-~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
++|.+.+.+.... .++..... ..||++++++.|++++||+|+++++|.... +||+..... |+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~~----~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDAF----GV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGGG----TE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcCC----Cc---
Confidence 4566666654432 34555555 488999999999999999999999999865 566554421 22
Q ss_pred CccccCCCCeEEEEEEEcccCcceeEeeccccccccceEeEEEeC
Q 008592 112 TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
+..+.||++++|+|++ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 4679999999999997 789999999998876666999999974
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=116.24 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=72.1
Q ss_pred cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCC------CCc-CccccCCCC--eE
Q 008592 52 LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGP------AYV-TQCPIQTGQ--SY 122 (560)
Q Consensus 52 ~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv------~~~-tq~~i~pG~--~~ 122 (560)
.++....+.++|. ++|+|+|++||+|+|+++|... ...|.+.+...+.++.+.. ++. ....|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3445555666666 6799999999999999999743 4467776665554432210 000 002689999 99
Q ss_pred EEEEEEcccCcceeEeecccccc-ccceEeEEEe
Q 008592 123 VYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIIL 155 (560)
Q Consensus 123 ~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 155 (560)
+|+|++ ++|+||||||..++. +||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999995 899999999987776 8999999985
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=99.28 E-value=1e-10 Score=123.29 Aligned_cols=204 Identities=11% Similarity=0.064 Sum_probs=125.0
Q ss_pred eEEEEEEEEEEEeeecC-----------ceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEe-cCcccCCCc
Q 008592 37 TRHYKFHIKMQNITRLC-----------QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHW-HGVRQLRSG 103 (560)
Q Consensus 37 ~~~~~l~~~~~~~~~~g-----------~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~-HG~~~~~~~ 103 (560)
.+++.|.++......+| ..-..+++||+. .|+|+|++| ++++||.|... ....+|+ ||.......
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 46777888766554433 234579999985 599999999 99999999985 4688999 897665444
Q ss_pred CCCCCC-----CcCccccCCCCeEEEEEEEcccCcceeEeeccccccccc-------------eEeEEEeCCCCCCCCCC
Q 008592 104 WADGPA-----YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATL-------------YGPIIILPKQQASYPFP 165 (560)
Q Consensus 104 ~~DGv~-----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl-------------~G~liV~~~~~~~~~~~ 165 (560)
.||.+ .+.+..|.||++++..++. .+.|+||++++......|+ ...+-+........+
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 79964 2567889999999999998 5789999999864432221 111111111000000
Q ss_pred CCCcceeEEeeeccccChH-HHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeE
Q 008592 166 QPFEEVPIIFGEWWKADTE-TIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDEL 244 (560)
Q Consensus 166 ~~~~e~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~ 244 (560)
..+.+..|..+...... .....+... ..++|||+.++. ..+.+.++.|++++|+|+|. ..+
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~-------~~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~~H 367 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG-------DDPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---EPQ 367 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC-------SSSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---EEE
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe-------eEEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---CCc
Confidence 00000000000000000 000000000 036789987531 23468999999999999998 479
Q ss_pred EEEEcCCeEEEEEeCCCccC
Q 008592 245 FFSIANHTLTIVETDAVYAK 264 (560)
Q Consensus 245 ~~~i~gh~~~via~DG~~v~ 264 (560)
.|||+||.|+|++.||..+.
T Consensus 368 P~HLHGh~F~Vl~~~G~~~~ 387 (451)
T 2uxt_A 368 AFHIEGVMFQIRNVNGAMPF 387 (451)
T ss_dssp EEEETTCEEEEEEETTBCCC
T ss_pred CeEECCceEEEEeeCCcCCC
Confidence 99999999999999997653
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-11 Score=125.23 Aligned_cols=100 Identities=22% Similarity=0.348 Sum_probs=81.5
Q ss_pred EEECCCC--CCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC--------CcCccccCCCCeEEEEEEE
Q 008592 59 VTVNGQF--PGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA--------YVTQCPIQTGQSYVYNFTV 128 (560)
Q Consensus 59 ~~~ng~~--pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~--------~~tq~~i~pG~~~~Y~~~~ 128 (560)
|+|||+. ..|.|++++||+|+++|.|.....+.+|+||...... .+|.. ......|.||++++|.|+.
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 3689999999999999999999999999999865432 33321 1234569999999999996
Q ss_pred --cccCcceeEeecccccc-ccceEeEEEeCCCCC
Q 008592 129 --TGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA 160 (560)
Q Consensus 129 --~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~ 160 (560)
.+.+|+|+||||..... .||.|.|+|.+++..
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCC
Confidence 26799999999987655 899999999987654
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-11 Score=130.40 Aligned_cols=96 Identities=17% Similarity=0.201 Sum_probs=75.7
Q ss_pred cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 52 LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 52 ~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
+++...+|++|+++++|+|++++||+|+++++|.+...-. +||+.+.. .|+ +..+.||++++|+|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 4577889999999999999999999999999998753211 36665542 222 2679999999999997 89
Q ss_pred CcceeEeeccc-cc-cccceEeEEEeCCC
Q 008592 132 RGTLFWHAHIS-WL-RATLYGPIIILPKQ 158 (560)
Q Consensus 132 ~Gt~wYH~H~~-~~-~~Gl~G~liV~~~~ 158 (560)
+|+||||||.. +. -.||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 99999999932 21 25999999999763
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.1e-10 Score=102.68 Aligned_cols=94 Identities=17% Similarity=0.166 Sum_probs=71.2
Q ss_pred EEEecCCCEEEEEEeeCCcCccC-CCceeecCcceEEE--------EeCC-CCCCCCCCCCCCCCCCCCccceeEeCCCC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAE-SHPLHLHGFNFFVV--------AQGF-GNFDPNKDPAKFNLVDPAERNTVGVPSGG 506 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~-~HP~HlHG~~F~Vl--------~~~~-g~~~~~~~~~~~~~~~p~~rDTv~vpp~g 506 (560)
.+.++.|++|+|++.|.+ .. .|.||+|+....+. ..+. ..+.+. -....++||..|.||+
T Consensus 36 ~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~-------~~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA-------DKSNIIAESPLANGNE 105 (139)
T ss_dssp EEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS-------CCTTEEEECCCBCTTC
T ss_pred eEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCc-------ccccccccccccCCCC
Confidence 478999999999999965 35 89999998653110 0000 011110 0123578999999999
Q ss_pred EEEEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 507 WVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 507 ~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
...|.|.+++||.|.||||+..|.+ ||+..|.|+
T Consensus 106 t~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 106 TVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 9999999999999999999999999 999999883
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.15 E-value=8.9e-11 Score=97.93 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=65.5
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe-c
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA-D 515 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a-d 515 (560)
.+.++.|++|+|+ |.. ...|++|+||..|... . |. + .+....++..+.||+...++|.+ +
T Consensus 20 ~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~--~-g~-~----------~~~~~~~~~~i~pG~~~~~~f~~~~ 80 (105)
T 3cvb_A 20 NVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA--S-KE-L----------ADKLSHSQLMFSPGESYEITFSSDF 80 (105)
T ss_dssp EEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG--C-HH-H----------HHHHCEEEEECSTTCEEEEEECTTS
T ss_pred EEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc--c-cc-c----------cccccccccccCCCCeEEEEEecCC
Confidence 5789999999874 643 4799999999876431 0 00 0 00012578899999999999998 7
Q ss_pred CceeeEEEeechhhhhcccEEEEEEcC
Q 008592 516 NPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 516 npG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
.||.|.|||| .|...||+..|.|.+
T Consensus 81 ~~G~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 81 PAGTYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp CSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred CCeeEEEEeC--CchhcCCEEEEEEcC
Confidence 9999999999 799999999999853
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=99.15 E-value=1.6e-10 Score=96.36 Aligned_cols=79 Identities=19% Similarity=0.298 Sum_probs=63.4
Q ss_pred CCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc
Q 008592 62 NGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 62 ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~ 141 (560)
+..|..+.|++++||+|++ .|..+..+++|+++. .||.....+..+.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 3455568999999999655 699888999999862 3565544556689999999888 479999999998
Q ss_pred ccccccceEeEEEe
Q 008592 142 SWLRATLYGPIIIL 155 (560)
Q Consensus 142 ~~~~~Gl~G~liV~ 155 (560)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 65 999999985
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.8e-09 Score=113.55 Aligned_cols=197 Identities=15% Similarity=0.200 Sum_probs=130.2
Q ss_pred eEEEEEEEEEEEeee------------cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCc
Q 008592 37 TRHYKFHIKMQNITR------------LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSG 103 (560)
Q Consensus 37 ~~~~~l~~~~~~~~~------------~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~ 103 (560)
.+++.|.++...... .|..-..+++||+. .|.|+|++| ++++||.|... ....+|++|.......
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~ 223 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA 223 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe
Confidence 467777776544332 12334578999986 599999999 99999999985 4689999998666544
Q ss_pred CCCCCCC-----cCccccCCCCeEEEEEEEcccCcceeEeecccccc----ccc--------------eEeEEEeCCC-C
Q 008592 104 WADGPAY-----VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR----ATL--------------YGPIIILPKQ-Q 159 (560)
Q Consensus 104 ~~DGv~~-----~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~----~Gl--------------~G~liV~~~~-~ 159 (560)
.||.+- +....|.||++++..+++ +++|.||++++..... .|| ....+++... .
T Consensus 224 -~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 224 -ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp -ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred -cCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 799752 355679999999999997 5699999999853211 122 1222232111 1
Q ss_pred CCCCCCCC----------CcceeEEeeeccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCC
Q 008592 160 ASYPFPQP----------FEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGK 229 (560)
Q Consensus 160 ~~~~~~~~----------~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~ 229 (560)
...+++.. ..+..+.+.- . . .+..++|||+.+. . ....+.++.|+
T Consensus 302 ~~~~~p~~l~~~~~l~~~~~~r~~~l~~-----~-------~-------~g~~~~iNg~~~~---~---~~~~~~~~~g~ 356 (439)
T 2xu9_A 302 KPLPLPKALSPFPTLPAPVVTRRLVLTE-----D-------M-------MAARFFINGQVFD---H---RRVDLKGQAQT 356 (439)
T ss_dssp CCCCCCSCCCCCCCCCCCSEEEEEEEEE-----E-------G-------GGTEEEETTBCCC---T---TCCCEEECTTC
T ss_pred ccccCcccCCCcccCCCCCcceEEEEEe-----e-------c-------cCceEeECCEECC---C---CCCceecCCCC
Confidence 11111100 0001111110 0 0 0136889999753 1 22358899999
Q ss_pred EEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCcc
Q 008592 230 TYLLRMINAALNDELFFSIANHTLTIVETDAVYA 263 (560)
Q Consensus 230 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v 263 (560)
+++|+|.|.+ ...+.|||+||.|+|++.+|...
T Consensus 357 ~~~~~~~N~~-~~~HP~HLHG~~F~Vl~~~g~~~ 389 (439)
T 2xu9_A 357 VEVWEVENQG-DMDHPFHLHVHPFQVLSVGGRPF 389 (439)
T ss_dssp EEEEEEEECS-SSCEEEEESSCCBEEEEETTEEC
T ss_pred EEEEEEEcCC-CCCCCceeCCCcEEEEeeCCCCC
Confidence 9999999997 45788999999999999999765
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-09 Score=108.07 Aligned_cols=88 Identities=22% Similarity=0.321 Sum_probs=71.6
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
++++++.|++|++.+.|.. ..+|++|+||... ....|. +..+...|+||+..+++|.++
T Consensus 66 P~i~~~~Gd~v~v~~~N~~---~~~~~iH~HG~~~---~~~DG~---------------p~~~~~~i~PG~~~~y~f~~~ 124 (288)
T 3gdc_A 66 PTLWAREGDALRIHFTNAG---AHPHTIHFHGVHR---ATMDGT---------------PGIGAGSIAPGQSFTYEFDAT 124 (288)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCBCCEESSCCC---GGGSCC---------------TTSTTCSBCTTCEEEEEEECC
T ss_pred CcEEEeCCCEEEEEEEeCC---CCcccEEeccccc---cccCCC---------------CCccceeECCCCEEEEEEEcC
Confidence 4689999999999999975 4799999999862 111110 112456799999999999999
Q ss_pred CceeeEEEeech---hhhhcccEEEEEEcCCC
Q 008592 516 NPGVWFMHCHLE---VHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 516 npG~w~~HCHil---~H~d~GMm~~~~V~~~~ 544 (560)
++|.|.||||.. .|...||+..+.|++..
T Consensus 125 ~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~ 156 (288)
T 3gdc_A 125 PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKE 156 (288)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECSS
T ss_pred CCccEEEEecCcchHHHHhCcCeEEEEEeCCc
Confidence 999999999997 79999999999997754
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.5e-08 Score=106.66 Aligned_cols=221 Identities=14% Similarity=0.075 Sum_probs=130.0
Q ss_pred EEEEEEEEEEeeecCc-----eeEEEEECCCCC--------CcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcC
Q 008592 39 HYKFHIKMQNITRLCQ-----TKSIVTVNGQFP--------GPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGW 104 (560)
Q Consensus 39 ~~~l~~~~~~~~~~g~-----~~~~~~~ng~~p--------GP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~ 104 (560)
++.|.++......++. ....+++||+.. .|+|+|++|+++++||.|... ....+|++|.......
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 4556665544433332 234789999853 289999999999999999984 4678999987665543
Q ss_pred CCCCC----CcCccccCCCCeEEEEEEEcccCcceeEeecccc--c-----c-ccceEeEEEeCCCCCCCCCCCCCccee
Q 008592 105 ADGPA----YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW--L-----R-ATLYGPIIILPKQQASYPFPQPFEEVP 172 (560)
Q Consensus 105 ~DGv~----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~--~-----~-~Gl~G~liV~~~~~~~~~~~~~~~e~~ 172 (560)
.||.+ .+....|.||++++..+++.+.+|+||.+++... . . .|+..+++.........+......+ .
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~-~ 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPN-P 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSS-C
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCc-c
Confidence 79964 2345668999999999998555799999998531 1 1 2343344443321111010000000 0
Q ss_pred EEeeeccccChH--HHHH-------H-HHhcCCCCCCCceEEEcCcCCCCCCC-------------C--CCceeeEEEcc
Q 008592 173 IIFGEWWKADTE--TIIN-------E-AMQTGGAPNISDAFTINGLPGPFYNC-------------A--AKDTFKLKVTP 227 (560)
Q Consensus 173 l~~~d~~~~~~~--~~~~-------~-~~~~~~~~~~~d~~lvNG~~~~~~~~-------------~--~~~~~~~~v~~ 227 (560)
..+.+....... .... . ...-. ....+..++|||+.+..-.. . ......+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~-~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQ-LGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECC-EEEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEE-eeccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 000010000000 0000 0 00000 00011268899997531100 0 00235789999
Q ss_pred CCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCc
Q 008592 228 GKTYLLRMINAALNDELFFSIANHTLTIVETDAVY 262 (560)
Q Consensus 228 g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 262 (560)
|++++++++|......+.|||+||.|+|++.+|..
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~ 414 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS 414 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC
Confidence 99999999965445689999999999999999875
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=98.95 E-value=2.7e-08 Score=106.83 Aligned_cols=201 Identities=16% Similarity=0.122 Sum_probs=121.4
Q ss_pred eEEEEECCCCC---------CcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCC----CcCccccCCCCe
Q 008592 56 KSIVTVNGQFP---------GPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQS 121 (560)
Q Consensus 56 ~~~~~~ng~~p---------GP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~ 121 (560)
...+++||+.. -|+|+|++|+++++||.|... ....+|++|....... .||.+ .+....|.||++
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 34789999853 189999999999999999985 4678999997666544 79964 235566999999
Q ss_pred EEEEEEEcccCcceeEeeccccc----cccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChH--HH--------H
Q 008592 122 YVYNFTVTGQRGTLFWHAHISWL----RATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTE--TI--------I 187 (560)
Q Consensus 122 ~~Y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~--~~--------~ 187 (560)
++..+++.+.+|+||.+++.... ..|+..+++.........+..... + ...+.+....... .. .
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcc
Confidence 99999985557999999986421 134434444433221111100000 0 0000000000000 00 0
Q ss_pred H-HHHhcCCCCCCCceEEEcCcCCCCCCC-------------C--CCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCC
Q 008592 188 N-EAMQTGGAPNISDAFTINGLPGPFYNC-------------A--AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANH 251 (560)
Q Consensus 188 ~-~~~~~~~~~~~~d~~lvNG~~~~~~~~-------------~--~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh 251 (560)
+ ..............++|||+.+..-.. . ......+.++.|++++++++| ...+.|||+||
T Consensus 348 ~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh 424 (521)
T 1v10_A 348 DINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGH 424 (521)
T ss_dssp SEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSC
T ss_pred eEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccc
Confidence 0 000000000001257899987531100 0 012357899999999999999 45788999999
Q ss_pred eEEEEEeCCCc
Q 008592 252 TLTIVETDAVY 262 (560)
Q Consensus 252 ~~~via~DG~~ 262 (560)
.|+|++.+|..
T Consensus 425 ~F~Vl~~~~~~ 435 (521)
T 1v10_A 425 NFDVVRTPGSS 435 (521)
T ss_dssp CEEEEECTTCS
T ss_pred eEEEEecCCCC
Confidence 99999999875
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.93 E-value=2.4e-09 Score=89.37 Aligned_cols=84 Identities=15% Similarity=0.182 Sum_probs=61.5
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeEEEEEEEcccCcceeEeeccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHIS 142 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~ 142 (560)
.+.|++++||+|++ .|.....+++|+|+...+. .+|.. ..+...+.||++++|+|++++++|+|||||| .
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~ 92 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-P 92 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-T
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-C
Confidence 37999999998755 5887778999988764421 12210 0122458999999999975468999999999 2
Q ss_pred cccccceEeEEEeC
Q 008592 143 WLRATLYGPIIILP 156 (560)
Q Consensus 143 ~~~~Gl~G~liV~~ 156 (560)
...+||.|.|+|.+
T Consensus 93 H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 93 HRGAGMVGKITVAG 106 (106)
T ss_dssp TGGGTCEEEEEECC
T ss_pred hhhcCcEEEEEEcC
Confidence 23479999999963
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.3e-10 Score=116.33 Aligned_cols=97 Identities=22% Similarity=0.190 Sum_probs=64.5
Q ss_pred eEEEEECCCCCC--cEEEEecCCEEEEEEEeCCCc--CeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 56 KSIVTVNGQFPG--PRIIAREGDRLLIRVINNVKY--NVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 56 ~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~--~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
-.+++|||+..+ |.|++++|++++++|.|.... .+++|+||.... .||+. .....|.||+++++.|++ ++
T Consensus 201 ~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~----~dG~~-~dtv~l~pger~~v~~~~-~~ 274 (306)
T 1sdd_A 201 SLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHK-ISAITLVSATSTTANMTV-SP 274 (306)
T ss_dssp CEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE----ETTEE-CSCCCEETTCCBC--------
T ss_pred CcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEee----eCCEE-cceEEECCCcEEEEEEEc-CC
Confidence 457999999865 899999999999999999754 678999996543 47753 566789999999999997 78
Q ss_pred CcceeEeecccccc-ccceEeEEEeCCC
Q 008592 132 RGTLFWHAHISWLR-ATLYGPIIILPKQ 158 (560)
Q Consensus 132 ~Gt~wYH~H~~~~~-~Gl~G~liV~~~~ 158 (560)
+|+||||||..... +||.|.|.|.+..
T Consensus 275 pG~~~~hch~~~H~~~GM~~~~~V~~~~ 302 (306)
T 1sdd_A 275 EGRWTIASLIPRHFQAGMQAYIDIKNCA 302 (306)
T ss_dssp -CCCCCBCCSTTTGGGTCBCCC------
T ss_pred CeEEEEEeCChHHHhcCCeEEEEEecCC
Confidence 99999999987655 8999999998653
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.86 E-value=5.6e-09 Score=87.05 Aligned_cols=83 Identities=13% Similarity=0.160 Sum_probs=62.6
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCC-CccceeEeCCCCEEEEEEEe-
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDP-AERNTVGVPSGGWVAIRFLA- 514 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p-~~rDTv~vpp~g~v~irf~a- 514 (560)
.+.++.|++|+|+ |.+ ...|.+|+|+..+.. ..|. ..+ ..+|++.+.||+...+.|.+
T Consensus 21 ~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~---~~g~------------~~~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA---KSAD------------LAKSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT---CCHH------------HHHHHCBCSCCCSTTCEEEEECCTT
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc---cccc------------cchhccccceeeCCCCEEEEEEecC
Confidence 4789999999986 543 368999999865411 0000 000 01467889999999998888
Q ss_pred cCceeeEEEeechhhhhcccEEEEEEc
Q 008592 515 DNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 515 dnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
+.||.|.|||| .|.++||+..|.|+
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 89999999999 89999999999985
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=98.84 E-value=5.1e-09 Score=115.62 Aligned_cols=101 Identities=16% Similarity=0.298 Sum_probs=83.8
Q ss_pred eeEEEEECCCC-CCcEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 55 TKSIVTVNGQF-PGPRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 55 ~~~~~~~ng~~-pGP~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
....++|||+. +.|+|++++|++++++|.|... ..+.+|+||....... .||. ......|.||++++++|.+ ++
T Consensus 225 ~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~-~d~~-~~d~v~l~pg~r~~v~~~~-~~ 301 (647)
T 1sdd_B 225 SHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENG-TQQH-QLGVWPLLPGSFKTLEMKA-SK 301 (647)
T ss_dssp CCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECS-SSCE-EESSEEECTTEEEEEEEEC-CS
T ss_pred cCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEec-CCCc-ccceEEECCCeEEEEEEEe-cc
Confidence 34678999997 5799999999999999999874 4799999998765442 4653 3456789999999999997 67
Q ss_pred CcceeEeecccccc-ccceEeEEEeCCC
Q 008592 132 RGTLFWHAHISWLR-ATLYGPIIILPKQ 158 (560)
Q Consensus 132 ~Gt~wYH~H~~~~~-~Gl~G~liV~~~~ 158 (560)
+|+|+||||..... .||.|.++|.++.
T Consensus 302 pG~w~~hch~~~h~~~Gm~~~~~V~~~~ 329 (647)
T 1sdd_B 302 PGWWLLDTEVGEIQRAGMQTPFLIVDRE 329 (647)
T ss_dssp SEEEEEECCCHHHHTTTCEEEEEEECTT
T ss_pred ceEeecccCcccccccccccceeeeccc
Confidence 89999999986554 8999999998653
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.7e-08 Score=88.52 Aligned_cols=91 Identities=14% Similarity=0.132 Sum_probs=65.8
Q ss_pred CCCCcEEEEecCCEEEEEEEeCCCc-CeeEEecCcccC--------C--CcC-CCCCC----C--cCccccCCCCeEEEE
Q 008592 64 QFPGPRIIAREGDRLLIRVINNVKY-NVTIHWHGVRQL--------R--SGW-ADGPA----Y--VTQCPIQTGQSYVYN 125 (560)
Q Consensus 64 ~~pGP~i~~~~Gd~v~v~~~N~l~~-~~~iH~HG~~~~--------~--~~~-~DGv~----~--~tq~~i~pG~~~~Y~ 125 (560)
+|--+.|+|++||+|+++|+|.... .++++.|+.... . ..+ .|-+| . -....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 3444799999999999999999877 888888874310 0 000 01011 0 011337999999999
Q ss_pred EEEcccCcceeEeeccccccccceEeEEEe
Q 008592 126 FTVTGQRGTLFWHAHISWLRATLYGPIIIL 155 (560)
Q Consensus 126 ~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 155 (560)
|++ +++|+|+||||..+...||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 997 68999999999876545999999984
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.6e-08 Score=99.09 Aligned_cols=100 Identities=18% Similarity=0.249 Sum_probs=77.2
Q ss_pred EEECCCCCC--cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC-------CcCccccCCCCeEEEEEEEc
Q 008592 59 VTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA-------YVTQCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 59 ~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~~tq~~i~pG~~~~Y~~~~~ 129 (560)
|.+||+.-+ |.|.++.||+|+++|.|.....+++|+||....... .|+.. ...-..|.||+++++.+...
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~-~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDNR-TGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSCCCEEEETTCCEESSS-SSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEeccccceeeeEecceEEEEe-cccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 567887543 899999999999999999999999999997653321 22211 12224589999999988642
Q ss_pred --ccCcceeEeecccccc-ccceEeEEEeCCCC
Q 008592 130 --GQRGTLFWHAHISWLR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 130 --~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 159 (560)
+.+|+|+||||..... .||.|.|.|++.+.
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 4589999999987655 89999999998764
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=5.1e-08 Score=97.69 Aligned_cols=100 Identities=20% Similarity=0.296 Sum_probs=78.1
Q ss_pred EEECCCCC--CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC-------cCccccCCCCeEEEEEEEc
Q 008592 59 VTVNGQFP--GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY-------VTQCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 59 ~~~ng~~p--GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~-------~tq~~i~pG~~~~Y~~~~~ 129 (560)
|++||+.- .|.|.++.||+|+++|.|.....+.+|+||....... .||... .....|.||+++++.+...
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v~~-~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWADNR-TGMLTGPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESST-TSSCCSTTCCCCEESEEEECTTCEEEEEEETT
T ss_pred hhcccCCcccccccccccCCEEEEEEecccccceeeeecCCeeEEEE-ECCccCCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 57787643 4889999999999999999988999999997654332 444322 1234589999999998752
Q ss_pred --ccCcceeEeecccccc-ccceEeEEEeCCCC
Q 008592 130 --GQRGTLFWHAHISWLR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 130 --~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 159 (560)
+.+|+|.||||..... .||.|.|+|++++.
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 4589999999986554 89999999998764
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.9e-07 Score=99.18 Aligned_cols=205 Identities=15% Similarity=0.125 Sum_probs=119.8
Q ss_pred eEEEEECCCC---------CCcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCCC----CcCccccCCCCe
Q 008592 56 KSIVTVNGQF---------PGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQS 121 (560)
Q Consensus 56 ~~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~ 121 (560)
...+++||+- +-|.|+|++|+++++||.|.. .....+|++|....... .||.+ .+....|.||++
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCceE
Confidence 4579999973 347999999999999999986 45678999997665544 79864 234566999999
Q ss_pred EEEEEEEcccCcceeEeeccccc----cccceEeEEEeCCCCCCCCCCCCCc-ceeEEeeeccccChHHH-HHHHHhcCC
Q 008592 122 YVYNFTVTGQRGTLFWHAHISWL----RATLYGPIIILPKQQASYPFPQPFE-EVPIIFGEWWKADTETI-INEAMQTGG 195 (560)
Q Consensus 122 ~~Y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~~~-~~~~~~~~~ 195 (560)
++..+++.+..|.||..+..... ..|...+++.........+...... .. ..+.+......... .......+.
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT-KCLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS-SBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc-cccccccccccccccCCCccCCCC
Confidence 99999985556999999875321 1233334444432211111100000 00 00001000000000 000000000
Q ss_pred --------CCCCCceEEEcCcCCCCCCC-----------C----CCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCe
Q 008592 196 --------APNISDAFTINGLPGPFYNC-----------A----AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHT 252 (560)
Q Consensus 196 --------~~~~~d~~lvNG~~~~~~~~-----------~----~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~ 252 (560)
....+..++|||+.+..-.. + .....++.++.|++++|.|.|......+.||++||.
T Consensus 326 ~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~ 405 (495)
T 3t6v_A 326 ADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHD 405 (495)
T ss_dssp SSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCC
T ss_pred CcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCc
Confidence 00011357899986421100 0 011346899999999999984344567899999999
Q ss_pred EEEEEeCCCc
Q 008592 253 LTIVETDAVY 262 (560)
Q Consensus 253 ~~via~DG~~ 262 (560)
|+|++.+|..
T Consensus 406 F~vl~~~g~~ 415 (495)
T 3t6v_A 406 FAVSESASNS 415 (495)
T ss_dssp EEEEECTTCC
T ss_pred EEEEecCCCC
Confidence 9999988753
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-08 Score=87.05 Aligned_cols=78 Identities=13% Similarity=0.220 Sum_probs=56.3
Q ss_pred CCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccc
Q 008592 63 GQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHIS 142 (560)
Q Consensus 63 g~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~ 142 (560)
..|-.+.|++++||+|++ .|....++++++.... +|........+.||++++|+| +++|+|||||-.|
T Consensus 55 ~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H 122 (132)
T 3c75_A 55 MKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPH 122 (132)
T ss_dssp TEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC
T ss_pred eEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCCC
Confidence 344447999999999865 5888777777765421 122122223578999999888 4799999999775
Q ss_pred cccccceEeEEEe
Q 008592 143 WLRATLYGPIIIL 155 (560)
Q Consensus 143 ~~~~Gl~G~liV~ 155 (560)
. ||.|.|+|+
T Consensus 123 ~---gM~G~I~V~ 132 (132)
T 3c75_A 123 P---FMRGKVIVE 132 (132)
T ss_dssp T---TCEEEEEEC
T ss_pred c---CCEEEEEEC
Confidence 4 999999984
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=98.72 E-value=1e-07 Score=100.26 Aligned_cols=194 Identities=14% Similarity=0.076 Sum_probs=123.7
Q ss_pred EEEEEEEEEEEeee-------------cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEe--cC---cc
Q 008592 38 RHYKFHIKMQNITR-------------LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHW--HG---VR 98 (560)
Q Consensus 38 ~~~~l~~~~~~~~~-------------~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~--HG---~~ 98 (560)
+++.|.++...... .|..-..+++||+. .|+|+|++| ++++||.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56777776554432 12234578999985 599999999 99999999984 5788999 77 44
Q ss_pred cCCCcCCCCCC-----CcCccccCCCCeEEEEEEEcccCcceeEeecccccccc--------------ceEeEEEe--CC
Q 008592 99 QLRSGWADGPA-----YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT--------------LYGPIIIL--PK 157 (560)
Q Consensus 99 ~~~~~~~DGv~-----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G--------------l~G~liV~--~~ 157 (560)
..... .||.+ .+....|.||++++..++. . .+.||..++......| ....++++ +.
T Consensus 216 ~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRLIA-VDQGFLARPIEVRALFLAPAERAEVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEEEE-eCCCccCCceEeceEEECCcceEEEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 43332 78864 2345668999999999987 3 4789998875321100 11222222 11
Q ss_pred CCC--CCCC---C----CCCcceeEEeeeccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEE-Ecc
Q 008592 158 QQA--SYPF---P----QPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLK-VTP 227 (560)
Q Consensus 158 ~~~--~~~~---~----~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~-v~~ 227 (560)
... +..+ + ....+..+.|.- + ...++|||+.+.. ..+.+. ++.
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~ 345 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL----------------S-----GMQWTINGMFWNA------SNPLFEHVSV 345 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE----------------E-----TTEEEETTBCCCT------TCTTCCCEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC----------------C-----CceeeECCCcCCC------CCCceeccCC
Confidence 110 0000 0 001112222210 0 1248999997531 223456 899
Q ss_pred CCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCcc
Q 008592 228 GKTYLLRMINAALNDELFFSIANHTLTIVETDAVYA 263 (560)
Q Consensus 228 g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v 263 (560)
|++++|+|.|.+....+.|||+||.|+|++.+|...
T Consensus 346 g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~ 381 (448)
T 3aw5_A 346 EGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPR 381 (448)
T ss_dssp CEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCH
T ss_pred CCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCc
Confidence 999999999998556799999999999999988653
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.71 E-value=3.9e-08 Score=86.34 Aligned_cols=99 Identities=19% Similarity=0.193 Sum_probs=71.1
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCc--ceEEEE-eC--CC---CCCCCCCCCCCCCCCCCccceeEeCCCCEE
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGF--NFFVVA-QG--FG---NFDPNKDPAKFNLVDPAERNTVGVPSGGWV 508 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~--~F~Vl~-~~--~g---~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v 508 (560)
.+.++.|++|+|++.|.+. +...|.||++.. .|.-+. .+ .+ .|-+.. -....+++|..|.||...
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 4789999999999999321 247999999852 221100 00 00 010000 012346889999999999
Q ss_pred EEEEEecCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 509 AIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 509 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
.+.|.++.||.|.|||++..|...||...|.|.+
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9999999999999999999999999999999863
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=98.70 E-value=4e-07 Score=96.19 Aligned_cols=218 Identities=12% Similarity=0.083 Sum_probs=128.8
Q ss_pred EEEEEEEEEEEeeecCc--------------eeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEe-cCcccCC
Q 008592 38 RHYKFHIKMQNITRLCQ--------------TKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHW-HGVRQLR 101 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~--------------~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~-HG~~~~~ 101 (560)
.++.|.++......+|. .-..+++||+. .|.+.+ +|+++++||.|... ....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 36667776655544331 22478999985 488876 67899999999874 5677888 6765443
Q ss_pred CcCCCCCC-----CcCccccCCCCeEEEEEEEcccCcceeEeecccccc-------ccceEeEEEeC-----CCCCCC--
Q 008592 102 SGWADGPA-----YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-------ATLYGPIIILP-----KQQASY-- 162 (560)
Q Consensus 102 ~~~~DGv~-----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~-----~~~~~~-- 162 (560)
.. .||.+ .++...|.|||+++..+++ .+.++|+.-+...... ..-.-.+-|.+ ....+.
T Consensus 229 Ia-~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 IA-SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp EE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred EE-eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 33 78853 2456779999999999998 5677888766532211 01011222221 111010
Q ss_pred -CC---CC----CCcceeEEeeec-cccChHHHHHHHH----h------------cCCC--------CCCCceEEEcCcC
Q 008592 163 -PF---PQ----PFEEVPIIFGEW-WKADTETIINEAM----Q------------TGGA--------PNISDAFTINGLP 209 (560)
Q Consensus 163 -~~---~~----~~~e~~l~~~d~-~~~~~~~~~~~~~----~------------~~~~--------~~~~d~~lvNG~~ 209 (560)
++ +. ..+++.+.+... .......+...+- . .|.. ......++|||+.
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~ 386 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQA 386 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBC
T ss_pred ccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCee
Confidence 01 11 112333333210 0000000111000 0 0000 0011247999997
Q ss_pred CCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC
Q 008592 210 GPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS 265 (560)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p 265 (560)
++. ..+.++++.|+++||+|+|.+....+.|||+||.|+|++.||....+
T Consensus 387 ~~~------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~ 436 (488)
T 3od3_A 387 FDM------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAA 436 (488)
T ss_dssp CCT------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCG
T ss_pred CCC------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCcccc
Confidence 531 34568999999999999999976789999999999999999987654
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=5.3e-07 Score=95.84 Aligned_cols=205 Identities=16% Similarity=0.102 Sum_probs=118.4
Q ss_pred eEEEEECCCC--------CCcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeE
Q 008592 56 KSIVTVNGQF--------PGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSY 122 (560)
Q Consensus 56 ~~~~~~ng~~--------pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~ 122 (560)
...++|||+. +-|.|+|++|+++++||.|.. .....+|++|....... .||.+ .+....|.||+++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcEE
Confidence 4578999973 347999999999999999987 45678999998766554 79864 2345669999999
Q ss_pred EEEEEEcccCcceeEeeccccc---c-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHH-HHHHHhcCC--
Q 008592 123 VYNFTVTGQRGTLFWHAHISWL---R-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETI-INEAMQTGG-- 195 (560)
Q Consensus 123 ~Y~~~~~~~~Gt~wYH~H~~~~---~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~-~~~~~~~~~-- 195 (560)
+..+++.+..|.||-.+..... . .+..-+++.........+........ ..+.+......... .......+.
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 9999985556999998874321 1 22222333333221111110000000 00011000000000 000000000
Q ss_pred ------CCCCCceEEEcCcCCCCCC---------CC------CCceeeEEEccCCEEEEEEEecC--CCCeEEEEEcCCe
Q 008592 196 ------APNISDAFTINGLPGPFYN---------CA------AKDTFKLKVTPGKTYLLRMINAA--LNDELFFSIANHT 252 (560)
Q Consensus 196 ------~~~~~d~~lvNG~~~~~~~---------~~------~~~~~~~~v~~g~~~rlRliN~~--~~~~~~~~i~gh~ 252 (560)
....+..++|||+.+.... .. ......+.++.|++++|.|.|.+ ....+.||++||.
T Consensus 324 ~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~ 403 (499)
T 3pxl_A 324 KAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHT 403 (499)
T ss_dssp EEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCC
T ss_pred EEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCc
Confidence 0001225789998642100 00 01234689999999999999532 2346899999999
Q ss_pred EEEEEeCCCc
Q 008592 253 LTIVETDAVY 262 (560)
Q Consensus 253 ~~via~DG~~ 262 (560)
|+|++.+|..
T Consensus 404 F~Vl~~~g~~ 413 (499)
T 3pxl_A 404 FAVVRSAGST 413 (499)
T ss_dssp EEEEECTTCC
T ss_pred EEEEeccCCc
Confidence 9999987743
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=98.69 E-value=6.4e-08 Score=97.11 Aligned_cols=121 Identities=18% Similarity=0.162 Sum_probs=89.6
Q ss_pred ceEEEEEEEEEEEeeec------C---ceeEEEEECCCCCC--cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcC
Q 008592 36 ITRHYKFHIKMQNITRL------C---QTKSIVTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGW 104 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~~------g---~~~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~ 104 (560)
..++|.|.++.-..... + .....++|||+.-. +.|++++|++++++|.|.....+.+|+||.......
T Consensus 135 ~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~- 213 (318)
T 3g5w_A 135 VTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAF- 213 (318)
T ss_dssp CCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSSCEEEEETTSCEEEEE-
T ss_pred ccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEe-
Confidence 35777777765432211 1 12357999998532 459999999999999999888899999998765543
Q ss_pred CCCCCC-----cCccccCCCCeEEEEEEEcccCcceeEeecccccc-------ccceEeEEEeCCC
Q 008592 105 ADGPAY-----VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-------ATLYGPIIILPKQ 158 (560)
Q Consensus 105 ~DGv~~-----~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~ 158 (560)
.||.+. .....|.||++++..|++ +++|.|++|||..... .||.+.|-+++..
T Consensus 214 ~dG~~~~~p~~~dtv~l~pger~~v~~~a-~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 214 KDGFPLDKPIKGDTVLIGPGERYDVILNM-DNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp ETTEEEEEEEEESEEEECTTCEEEEEEEC-CSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cCCcccCCCccccEEEECCCCEEEEEEEC-CCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 677542 234568999999999997 7899999999975432 4788888887654
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=2.2e-08 Score=105.73 Aligned_cols=96 Identities=15% Similarity=0.169 Sum_probs=77.5
Q ss_pred EEEECCCCCC---cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCC--CCCC------C-cCccccCCCCeEEEE
Q 008592 58 IVTVNGQFPG---PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWA--DGPA------Y-VTQCPIQTGQSYVYN 125 (560)
Q Consensus 58 ~~~~ng~~pG---P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~--DGv~------~-~tq~~i~pG~~~~Y~ 125 (560)
.|+|||+..+ |.+++++|++++++|.|.....+.+|+||....... . +|.+ + -.-..+.||++.+.+
T Consensus 372 ~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~-~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~ 450 (481)
T 3zx1_A 372 MFLINRKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELIS-SKLNGKVQKAEFRALRDTINVRPNEELRLR 450 (481)
T ss_dssp TEEETTBCCCTTCCCEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEE-EEETTEEEECSSCCEESEEEECTTCEEEEE
T ss_pred eeEECCEeCCCCCceEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEE-ecccCCCCCcccCcccceEEECCCCEEEEE
Confidence 4999999877 679999999999999998889999999998654321 1 2311 0 011348999999999
Q ss_pred EEEcccCcceeEeecccccc-ccceEeEEEe
Q 008592 126 FTVTGQRGTLFWHAHISWLR-ATLYGPIIIL 155 (560)
Q Consensus 126 ~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 155 (560)
|.. +.+|.|.||||..... .||.+.|.|+
T Consensus 451 ~~~-d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 451 MKQ-DFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp ECC-CSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred EEc-CCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 997 8899999999987655 8999999997
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.66 E-value=7.4e-08 Score=79.25 Aligned_cols=79 Identities=13% Similarity=0.072 Sum_probs=62.7
Q ss_pred CCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc
Q 008592 62 NGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 62 ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~ 141 (560)
|..|-...|+++.||+|++.++|.....+++...+.... ..+.||++.+|.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 334444689999999999999999877777776655432 346899999999996 899999999975
Q ss_pred ccccccceEeEEEe
Q 008592 142 SWLRATLYGPIIIL 155 (560)
Q Consensus 142 ~~~~~Gl~G~liV~ 155 (560)
|. ..||.|.|+|+
T Consensus 88 H~-~~gM~G~i~Ve 100 (100)
T 4hci_A 88 HL-LKGMEGKVIVK 100 (100)
T ss_dssp TG-GGTCEEEEEEC
T ss_pred cc-CCCCEEEEEEC
Confidence 32 26999999995
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=98.66 E-value=5.2e-08 Score=98.78 Aligned_cols=86 Identities=23% Similarity=0.355 Sum_probs=68.1
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
+++.++.|++|+|.+.|... +...|.+|+||+.+. .+ + + .+..|+||+..+++|+++
T Consensus 65 P~i~v~~Gd~v~v~~~N~~~-~~~~h~~~~h~~~~~---~~-~---------------~---~~~~i~pG~~~~y~f~~~ 121 (336)
T 1oe1_A 65 PTLVVHEGDYVQLTLVNPAT-NAMPHNVDFHGATGA---LG-G---------------A---KLTNVNPGEQATLRFKAD 121 (336)
T ss_dssp CCEEEETTCEEEEEEEECTT-CCSCBCCEETTSCSG---GG-G---------------G---GGCCBCTTEEEEEEEECC
T ss_pred CeEEEcCCCEEEEEEEcCCC-CCccccceECCCCCC---CC-C---------------c---ceEEeCCCCEEEEEEECC
Confidence 35889999999999999631 236899999997531 00 1 0 012499999999999999
Q ss_pred CceeeEEEeec----hhhhhcccEEEEEEcCCC
Q 008592 516 NPGVWFMHCHL----EVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 516 npG~w~~HCHi----l~H~d~GMm~~~~V~~~~ 544 (560)
++|.|.||||. .+|...||...+.|.+..
T Consensus 122 ~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~ 154 (336)
T 1oe1_A 122 RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRD 154 (336)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTT
T ss_pred CCeEEEEecCCCCchhHHHhCCCeEEEEEecCc
Confidence 99999999997 489999999999998654
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.3e-06 Score=93.82 Aligned_cols=202 Identities=10% Similarity=0.088 Sum_probs=118.0
Q ss_pred eEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeEEEEEEEcc
Q 008592 56 KSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSYVYNFTVTG 130 (560)
Q Consensus 56 ~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~~Y~~~~~~ 130 (560)
...+++||+. .|+|+|++|+++++||.|... ....+|++|....... .||.+ .+....|.||++++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 3478999985 599999999999999999974 5678899887665544 78864 234566999999999998743
Q ss_pred c-CcceeEeecccccc-------ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccC----------hHHHHHHHHh
Q 008592 131 Q-RGTLFWHAHISWLR-------ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKAD----------TETIINEAMQ 192 (560)
Q Consensus 131 ~-~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~----------~~~~~~~~~~ 192 (560)
+ .|.||......... ..+.+..|++-......+-+....+....+.|..... ...+... ..
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~-~~ 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVD-VV 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEE-EE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEE-EE
Confidence 3 57899998754321 1122223333211111100000000000000000000 0000000 00
Q ss_pred cCCCCCCCceEEEcCcCCCCCC--------------CCC----CceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEE
Q 008592 193 TGGAPNISDAFTINGLPGPFYN--------------CAA----KDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLT 254 (560)
Q Consensus 193 ~~~~~~~~d~~lvNG~~~~~~~--------------~~~----~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~ 254 (560)
..........++|||+.+..-. .+. .....+.++.|++++|.|.|.+ ...+.|||+||.|+
T Consensus 324 ~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~-~~~HP~HLHGh~F~ 402 (534)
T 1zpu_A 324 MDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD-TGTHPFHLHGHAFQ 402 (534)
T ss_dssp EEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS-SSCEEEEETTCCEE
T ss_pred eeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC-CCCCCeEecCCceE
Confidence 0000011235789998642100 000 0134688999999999999987 45789999999999
Q ss_pred EEEeCCC
Q 008592 255 IVETDAV 261 (560)
Q Consensus 255 via~DG~ 261 (560)
|++.++.
T Consensus 403 Vl~~~~~ 409 (534)
T 1zpu_A 403 TIQRDRT 409 (534)
T ss_dssp EEEECCC
T ss_pred EEeecCC
Confidence 9999875
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.2e-07 Score=77.69 Aligned_cols=80 Identities=14% Similarity=0.205 Sum_probs=59.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+| .|.+ ...|.+|+|+..+- ..++. ...++|++.+.||+...+.| +.
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~p------~~~~~----------~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAIP------SGVNA----------DAISRDDYLNAPGETYSVKL--TA 75 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGSC------TTCCH----------HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCC------Ccccc----------ccccccceecCCCCEEEEEe--CC
Confidence 478999999998 4543 36899999975320 00000 01246889999999888765 58
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||| .|.+.||...+.|+
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999883
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=2.7e-06 Score=91.95 Aligned_cols=85 Identities=15% Similarity=0.182 Sum_probs=68.2
Q ss_pred eEEEEECCCCC--------CcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeE
Q 008592 56 KSIVTVNGQFP--------GPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSY 122 (560)
Q Consensus 56 ~~~~~~ng~~p--------GP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~ 122 (560)
...++|||+.. -|+|.|++|+++++||.|... ....+|++|....... .||.+ .+....|.||+++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 34689999973 379999999999999999985 4678999997665544 78875 2355679999999
Q ss_pred EEEEEEcccCcceeEeecc
Q 008592 123 VYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 123 ~Y~~~~~~~~Gt~wYH~H~ 141 (560)
+..+++.+..|.||.....
T Consensus 274 dvlv~~~~~~g~y~i~a~~ 292 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTF 292 (559)
T ss_dssp EEEEECCSCSSEEEEEEEC
T ss_pred EEEEECCCCCCcEEEEEEe
Confidence 9999985557899999876
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.60 E-value=1.9e-07 Score=76.48 Aligned_cols=78 Identities=17% Similarity=0.241 Sum_probs=59.1
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCc-cceeEeCCCCEEEEEEEec
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAE-RNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~-rDTv~vpp~g~v~irf~ad 515 (560)
.+.++.|++|+|+ |.+ ...|.+|+++..+- +. ..+.| .|++.+.||+...+.| +
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--C
Confidence 4789999999987 532 36899999874321 00 00112 5688899999888766 8
Q ss_pred CceeeEEEeechhhhhcccEEEEEEc
Q 008592 516 NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 516 npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.||.|.|||| .|.+.||...+.|+
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999883
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.57 E-value=7.7e-08 Score=78.80 Aligned_cols=80 Identities=15% Similarity=0.220 Sum_probs=58.0
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCC-CCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADG-PAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG-v~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
+.|++++||+|+ +.|.....+++|+|+...+.. .|. ....+...+.||++++++|. ++|+|+|||+.| ..+
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H-~~~ 89 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH-QGA 89 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG-GGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc-ccc
Confidence 789999999876 579887899999998643211 110 00011235789999999884 699999999932 346
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 2plt_A 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1e-07 Score=96.50 Aligned_cols=85 Identities=20% Similarity=0.277 Sum_probs=66.4
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
+.++++.|++|+|.+.|... +-..|.+|+|+... . .+ . +.. + .|+||+..+++|+++
T Consensus 64 P~i~~~~Gd~v~v~~~N~~~-~~h~Hg~~~~~~~~----~-~~-------~-------~~~--~-~i~PG~~~~y~f~~~ 120 (333)
T 1mzy_A 64 PLMIVHEGDYVELTLINPPE-NTMPHNIDFHAATG----A-LG-------G-------GGL--T-LINPGEKVVLRFKAT 120 (333)
T ss_dssp CEEEEETTCEEEEEEEECTT-CCSCBCCEETTSCS----G-GG-------G-------GGG--C-CBCTTEEEEEEEECC
T ss_pred CcEEecCCCEEEEEEEECCC-CcccccceecCCCC----C-CC-------C-------Cce--e-EeCCCCEEEEEEECC
Confidence 46899999999999999641 23578888887531 0 00 0 011 2 489999999999999
Q ss_pred CceeeEEEeech-----hhhhcccEEEEEEcCC
Q 008592 516 NPGVWFMHCHLE-----VHTSWGLKMAWIVNDG 543 (560)
Q Consensus 516 npG~w~~HCHil-----~H~d~GMm~~~~V~~~ 543 (560)
++|.|.||||.. +|...||+..+.|++.
T Consensus 121 ~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~ 153 (333)
T 1mzy_A 121 RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 153 (333)
T ss_dssp SCEEEEEECCCSTTHHHHHHHTTCEEEEEEECT
T ss_pred CCEEEEEeecCCcccchhhhhCCCEEEEEEccC
Confidence 999999999996 7999999999999764
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.54 E-value=3.8e-07 Score=79.94 Aligned_cols=91 Identities=14% Similarity=0.169 Sum_probs=64.5
Q ss_pred CCCcEEEEecCCEEEEEEEe--CCCcCeeEEecCcc------------cCCC-cC---CCCCCC-cCccccCCCCeEEEE
Q 008592 65 FPGPRIIAREGDRLLIRVIN--NVKYNVTIHWHGVR------------QLRS-GW---ADGPAY-VTQCPIQTGQSYVYN 125 (560)
Q Consensus 65 ~pGP~i~~~~Gd~v~v~~~N--~l~~~~~iH~HG~~------------~~~~-~~---~DGv~~-~tq~~i~pG~~~~Y~ 125 (560)
|-.+.|+|+.||+|+++++| .....++++++... .... .+ .|.... -.-..|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 33479999999999999999 66778888887321 0000 00 010000 001347899999999
Q ss_pred EEEcccCcceeEeecccccc-ccceEeEEEeC
Q 008592 126 FTVTGQRGTLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 126 ~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
|++ +.+|+|||||+..+.. .||.|.|+|.+
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 997 7899999999986655 79999999964
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.54 E-value=2.7e-07 Score=74.27 Aligned_cols=72 Identities=17% Similarity=0.324 Sum_probs=57.0
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|. |.+ ...|.+|+|+.. +...++..+.||+...+.| +.
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~~ 68 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--SE 68 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--CC
Confidence 4789999999986 432 368999998721 0114678889998877765 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||| .|.+.||...+.|+
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 89999999999873
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.51 E-value=2.7e-07 Score=75.46 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=56.6
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+|++ .|.....+++|.++...++.. .++.. .....+.||++++++| +++|+|+|||+.| ..+|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 6899999998765 587777899998875432100 00000 1124579999999988 4799999999932 3379
Q ss_pred ceEeEEEe
Q 008592 148 LYGPIIIL 155 (560)
Q Consensus 148 l~G~liV~ 155 (560)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=98.49 E-value=5e-07 Score=75.90 Aligned_cols=74 Identities=23% Similarity=0.337 Sum_probs=58.3
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.|+|.+.|.. ...|-|++.... -+..+.||+...+.|.++.
T Consensus 39 ~i~v~~G~~V~~~~~n~d---~~~H~~~i~~~~----------------------------~~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKS---PISEGFSIDAFG----------------------------VQEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEETTCEEEEEEEECS---SSCEEEEEGGGT----------------------------EEEEECTTCEEEEEEECCS
T ss_pred EEEEeCCCEEEEEEEECC---CCeEEEEEcCCC----------------------------ceeEeCCCCEEEEEEECCC
Confidence 478999999999999964 234544443211 1567999999999999999
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
||.|.||||+..|... |...+.|++
T Consensus 88 ~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 88 AGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp CEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CEEEEEECCCCCchHH-CEEEEEEeC
Confidence 9999999999888655 999998853
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=98.46 E-value=4.6e-07 Score=91.79 Aligned_cols=102 Identities=19% Similarity=0.213 Sum_probs=79.7
Q ss_pred eeEEEEECCCCCC--cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC-----CcCccccCCCCeEEEEEE
Q 008592 55 TKSIVTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA-----YVTQCPIQTGQSYVYNFT 127 (560)
Q Consensus 55 ~~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~-----~~tq~~i~pG~~~~Y~~~ 127 (560)
....++|||+.-. +.|.+++|++++++|.|.....+.+|+||....... .||.+ ......|.||++++..|+
T Consensus 164 ~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~-~DG~~~~~p~~~dtv~l~pg~r~~v~~~ 242 (339)
T 2zwn_A 164 VADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTH-KDGLPLDSPYYADTVLVSPGERYDVIIE 242 (339)
T ss_dssp CCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEEccccCCCcccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEE-eCCeecCCCcEEEEEEECCCCEEEEEEE
Confidence 3457999998532 349999999999999999888999999998665443 68853 123455889999999999
Q ss_pred EcccCcceeEeeccccc-------cccceEeEEEeCCC
Q 008592 128 VTGQRGTLFWHAHISWL-------RATLYGPIIILPKQ 158 (560)
Q Consensus 128 ~~~~~Gt~wYH~H~~~~-------~~Gl~G~liV~~~~ 158 (560)
+ +++|.|++|||.... ..||.+.|.+.+..
T Consensus 243 ~-~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 243 A-DNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp C-CSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred e-CCCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 8 779999999997553 26888887777654
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.45 E-value=4e-07 Score=73.32 Aligned_cols=74 Identities=18% Similarity=0.252 Sum_probs=55.3
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
.+.|+++.||+|++ .|.....+++|.++.. ++. .....+.||+++++.| +++|+|||||+.|. .+
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H~-~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS-----HKDLAFSPGETFEATF---SEPGTYTYYCEPHR-GA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC---CSCEEEEEECTTTG-GG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe---CCCEEEEEEeCCCc-cC
Confidence 36899999999765 5877778899988721 100 1124578999998877 57999999999432 35
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=3.7e-07 Score=74.50 Aligned_cols=78 Identities=15% Similarity=0.317 Sum_probs=58.5
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ...|.+++++..+ ..+ .. ...+++..+.||+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~-------~~------~~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GES-------AP------ALSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSC-------HH------HHCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----ccc-------cc------cccccceecCCCCEEEEEe--CC
Confidence 4789999999887 532 3689999987654 000 00 0014677888998887766 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||+ .|.++||...+.|+
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 89999999999883
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=72.15 Aligned_cols=72 Identities=22% Similarity=0.399 Sum_probs=58.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.||....+.|.++.
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCS
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEeccc
Confidence 478999999999999964 3567776654432 234778889999999999
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|+|. .|...||.+.+.|+
T Consensus 78 ~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 78 AGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CceEEEECc--cccCCCCEEEEEEC
Confidence 999999996 69999999999884
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.40 E-value=9.9e-07 Score=72.24 Aligned_cols=82 Identities=13% Similarity=0.156 Sum_probs=58.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+| .|.+ ...|.+|+++..|. . + ++. .. ....+|++.+.||+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~--g-~~~----~~----~~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---A--G-VDV----TK----ISMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---T--T-CCH----HH----HSCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---c--c-ccc----cc----ccccccceeeCCCCEEEEEe--CC
Confidence 478999999988 4543 36899999985440 0 0 000 00 00125667889999888766 69
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||+ .|.++||...|.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 77 KGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999 79999999999883
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=8e-07 Score=72.50 Aligned_cols=77 Identities=18% Similarity=0.210 Sum_probs=54.9
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC--cCccccCCCCeEEEEEEEcccCcceeEeecccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY--VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~--~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~ 145 (560)
+.|++++||+| ++.|.....++++.++...+ +|..+ .....+.||+++++.| +++|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 68999999986 55687767788888765331 11000 0123578999999887 5799999999932 33
Q ss_pred ccceEeEEEe
Q 008592 146 ATLYGPIIIL 155 (560)
Q Consensus 146 ~Gl~G~liV~ 155 (560)
+||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 6999999984
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.36 E-value=8.5e-07 Score=73.06 Aligned_cols=82 Identities=11% Similarity=0.042 Sum_probs=54.5
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCC--cCCCCCCCc--CccccCCCCeEEEEEEEcccCcceeEeecccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRS--GWADGPAYV--TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW 143 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~--tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~ 143 (560)
+.|++++||+|+ +.|.....++++++.-..... ..++..+++ +...+.||++++++| +++|+|+|||+ ..
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~-~H 90 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT-PH 90 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS-TT
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC-CC
Confidence 789999999976 558876778887773100000 000000111 224579999999888 57999999999 33
Q ss_pred ccccceEeEEEe
Q 008592 144 LRATLYGPIIIL 155 (560)
Q Consensus 144 ~~~Gl~G~liV~ 155 (560)
..+||.|.|+|+
T Consensus 91 ~~~gM~G~i~V~ 102 (102)
T 1kdj_A 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 347999999984
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=98.35 E-value=1.3e-06 Score=74.29 Aligned_cols=75 Identities=13% Similarity=0.170 Sum_probs=52.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
..|++++||+|++.+.|. + |++......+-+|. ....+.||++++|+| +.+|+|||+|-.| ..+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~P~g~---~~f~~~pg~t~s~TF---~~pG~y~y~C~~H-~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---S-----HNVEAIKEILPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTPH-FGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---T-----CCCEECTTSSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEcCCcCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 699999999988877762 3 44332211112332 123457999999888 4699999999843 2379
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.1e-06 Score=75.17 Aligned_cols=76 Identities=13% Similarity=0.260 Sum_probs=52.3
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+|++.+.|. + |++......+-||. ....+.||++++|+| +.+|+|||||-.| ..+|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~-----H~v~~~~~~~P~g~---~~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---G-----HNSALMKGGAPEGA---ETWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---S-----CCCEECTTCSCTTC---CCCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEccCcCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999977766553 3 44432211111222 123457999988888 4799999999854 3479
Q ss_pred ceEeEEEeCCC
Q 008592 148 LYGPIIILPKQ 158 (560)
Q Consensus 148 l~G~liV~~~~ 158 (560)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999754
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=98.30 E-value=2.6e-06 Score=86.29 Aligned_cols=98 Identities=18% Similarity=0.146 Sum_probs=71.5
Q ss_pred EEEEECCCCC----CcEEEEecCCEEEEEEEeCCCcC--eeEEecCcccCCCcCCCCCC------CcCccccCCCCeEEE
Q 008592 57 SIVTVNGQFP----GPRIIAREGDRLLIRVINNVKYN--VTIHWHGVRQLRSGWADGPA------YVTQCPIQTGQSYVY 124 (560)
Q Consensus 57 ~~~~~ng~~p----GP~i~~~~Gd~v~v~~~N~l~~~--~~iH~HG~~~~~~~~~DGv~------~~tq~~i~pG~~~~Y 124 (560)
..++|||+.- -|.|.+++|+++++.+.|..... ..+|.|++.+. .||.. .+....|.||++++.
T Consensus 216 ~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi----~dG~~~~~p~~~~dtv~l~pGer~~v 291 (340)
T 2bw4_A 216 THIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVW----ATGKFRNPPDLDQETWLIPGGTAGAA 291 (340)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEE----TTCCTTSCCEEEESCCCBCTTEEEEE
T ss_pred CEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccceEEecCcceEEe----CCCcccCCccccceEEEeCCCceEEE
Confidence 4799999963 38999999999988777754332 23344444432 36643 123356899999999
Q ss_pred EEEEcccCcceeEeecccc--ccccceEeEEEeCCCC
Q 008592 125 NFTVTGQRGTLFWHAHISW--LRATLYGPIIILPKQQ 159 (560)
Q Consensus 125 ~~~~~~~~Gt~wYH~H~~~--~~~Gl~G~liV~~~~~ 159 (560)
.++. +++|.||||||... ...||.|.|.|.++..
T Consensus 292 ~v~~-~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 292 FYTF-RQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EEEC-CSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEEC-CCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 9997 67999999999863 3589999999987653
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.30 E-value=2.4e-06 Score=69.87 Aligned_cols=77 Identities=14% Similarity=0.191 Sum_probs=55.9
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC------CcCccccCCCCeEEEEEEEcccCcceeEeecc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA------YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~ 141 (560)
..|++++||+| +++|.....+++|.++...+ +|.. ......+.||++++++|. ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcCC
Confidence 68999999985 45788877888888874321 2211 011235789999998874 79999999993
Q ss_pred ccccccceEeEEEe
Q 008592 142 SWLRATLYGPIIIL 155 (560)
Q Consensus 142 ~~~~~Gl~G~liV~ 155 (560)
...+||.|.|+|+
T Consensus 87 -H~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 -HAGAGMVGKVTVN 99 (99)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -ccccCCEEEEEEC
Confidence 2346999999984
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.28 E-value=2.4e-06 Score=69.88 Aligned_cols=77 Identities=12% Similarity=0.200 Sum_probs=55.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC----C--cCccccCCCCeEEEEEEEcccCcceeEeecc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA----Y--VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~----~--~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~ 141 (560)
+.|++++||+|+ ++|....+++++.++...+ +|.. + .....+.||++++++|. ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEEC---CCceEEEEcCC
Confidence 689999999765 4788777888888764321 1110 0 11134789999998873 79999999993
Q ss_pred ccccccceEeEEEe
Q 008592 142 SWLRATLYGPIIIL 155 (560)
Q Consensus 142 ~~~~~Gl~G~liV~ 155 (560)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 2 337999999984
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=3.8e-06 Score=90.77 Aligned_cols=86 Identities=27% Similarity=0.358 Sum_probs=70.4
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccce------eEeCCCCEEE
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNT------VGVPSGGWVA 509 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDT------v~vpp~g~v~ 509 (560)
++++++.|++|++.+.|.- ....+.+|+||... .+. .|-|- ..|+||+..+
T Consensus 34 P~I~~~~GD~v~v~v~N~l--~~~~tsiHwHGl~~----~~~-----------------~~~DGv~~vtq~~I~PG~s~t 90 (552)
T 1aoz_A 34 PTIRANAGDSVVVELTNKL--HTEGVVIHWHGILQ----RGT-----------------PWADGTASISQCAINPGETFF 90 (552)
T ss_dssp CCEEEETTCEEEEEEEECC--SSCCBCEEEETCCC----TTC-----------------GGGSCCBTTTBCCBCTTCEEE
T ss_pred CcEEEeCCCEEEEEEEeCC--CCCCeeEEeCCCcc----CCC-----------------cccCCCcccccCCcCCCCeEE
Confidence 3589999999999999963 23789999999764 110 11221 3589999999
Q ss_pred EEEEecCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 510 IRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 510 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
.+|+++.+|.|.||||...+...||.+.+.|.+++
T Consensus 91 Y~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 91 YNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQ 125 (552)
T ss_dssp EEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCT
T ss_pred EEEECCCCEEEEEEECchhHHhccCeeeEEEeCCc
Confidence 99999999999999999999999999999998764
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.25 E-value=2e-06 Score=70.85 Aligned_cols=84 Identities=14% Similarity=0.129 Sum_probs=57.4
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCc-cceeEeCCCCEEEEEEEec
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAE-RNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~-rDTv~vpp~g~v~irf~ad 515 (560)
.+.++.|++|+|+ |.+ ...|.++++.-... .+.+... . ..+.+ .+++.+.||+...+.| +
T Consensus 18 ~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~-----~~~~~~~------~-~~~~~~~~~~~~~pG~~~~~tf--~ 78 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA-----PGTVASE------L-KAASMDENDLLSEDEPSFKAKV--S 78 (102)
T ss_dssp EEEECTTCCEEEE--ECS---SSCBCCEECCCTTC-----CHHHHHH------H-HHTSCCTTCCBBTTBCEEEECC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCcccc-----cccccch------h-hcccccccceecCCCCEEEEEe--C
Confidence 4789999999986 543 36899998731100 0000000 0 00122 4677889998877766 8
Q ss_pred CceeeEEEeechhhhhcccEEEEEEc
Q 008592 516 NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 516 npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.||.|.|||+ .|.++||...|.|+
T Consensus 79 ~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 79 TPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp SCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCeEEEEEeC--CCcccCCeEEEEEC
Confidence 9999999999 99999999999884
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=98.21 E-value=5.1e-06 Score=70.53 Aligned_cols=75 Identities=8% Similarity=-0.027 Sum_probs=52.2
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
..|++++||+|++. |.. .++++..+.... -+|. ....+.||++++|+| +.+|+|||||-.| ..+|
T Consensus 22 ~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKFV--PTD-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEEEE--CSS-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEE--ECC-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 69999999997655 543 566665552211 1222 123467999999888 4689999999632 2379
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=98.20 E-value=3.5e-06 Score=90.20 Aligned_cols=102 Identities=19% Similarity=0.186 Sum_probs=75.0
Q ss_pred eEEEEECCCCC-C-cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcC---------------CCCCC--------C
Q 008592 56 KSIVTVNGQFP-G-PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGW---------------ADGPA--------Y 110 (560)
Q Consensus 56 ~~~~~~ng~~p-G-P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~---------------~DGv~--------~ 110 (560)
...|.+||+.. . +.+.++.|+.++++|.|.....+.+|+||........ ..|.+ +
T Consensus 383 ~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
T 2wsd_A 383 RPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKG 462 (513)
T ss_dssp CEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSS
T ss_pred CceEeECCccCCCcccEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccC
Confidence 34678999853 3 3578999999999999998899999999986432110 01111 1
Q ss_pred c-CccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCC
Q 008592 111 V-TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPK 157 (560)
Q Consensus 111 ~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~ 157 (560)
. .-..|.||++.+..+...+.+|.|.||||..... .||.+.+.|.++
T Consensus 463 ~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 463 WKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp CBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred cccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 0 1123788998887777646799999999987655 899999999864
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.13 E-value=5e-06 Score=67.97 Aligned_cols=82 Identities=13% Similarity=0.165 Sum_probs=57.4
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+| .|.+ ...|.++++...+- . + .+ ... ....++.+.+.||+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~--~-~~------~~~--~~~~~~~~~~~~G~~~~~tf--~~ 76 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---S--G-VD------ASK--ISMSEEDLLNAKGETFEVAL--SN 76 (99)
T ss_dssp EEEECTTCEEEE--EECS---SCCBCCEECTTSSC---T--T-CC------HHH--HCCCTTCCBCSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCc---c--c-cc------ccc--cccccCccccCCCCEEEEEE--CC
Confidence 478999999988 4543 36899999875330 0 0 00 000 00124556788998877765 69
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||+ .|..+||...+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 77 KGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CceEEEEcC--CCcccCCEEEEEEC
Confidence 999999999 79999999999873
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=98.13 E-value=4.6e-07 Score=101.04 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=79.3
Q ss_pred EEEEECCCCCC--cEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccC
Q 008592 57 SIVTVNGQFPG--PRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQR 132 (560)
Q Consensus 57 ~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~ 132 (560)
.+++|||+..+ |.|.+++|++++++|.|... ..+.+|+||....... .||. ......|.||++++..|.+ +++
T Consensus 355 ~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~-~dg~-~~Dtv~l~Pg~~~~v~~~a-d~p 431 (770)
T 2r7e_B 355 RFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRK-KEEY-KMALYNLYPGVFETVEMLP-SKA 431 (770)
T ss_dssp CEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCS-SSCC-EESEEECCTTCCCEEEECC-SSC
T ss_pred CccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEe-cCCc-eeeEEEECCCeEEEEEEEe-CCC
Confidence 46899999764 78999999999999999864 4799999998776553 5653 2233668999999999997 789
Q ss_pred cceeEeecccccc-ccceEeEEEeC
Q 008592 133 GTLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 133 Gt~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
|.|++|||..... .||.+.|.|..
T Consensus 432 G~w~~hcH~~~H~~~GM~~~~~V~s 456 (770)
T 2r7e_B 432 GIWRVECLIGEHLHAGMSTLFLVYS 456 (770)
T ss_dssp BCCCBCCCSHHHHTTBCCCCCCBCC
T ss_pred CceEEEecccccccccccccccccc
Confidence 9999999987654 89999998854
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=98.12 E-value=8.2e-06 Score=69.93 Aligned_cols=92 Identities=8% Similarity=0.021 Sum_probs=60.1
Q ss_pred CCCcEEEEecC-CEEEEEEEeCCCcC-----eeE--EecCcccC-------CCcCCC----CCCC-c-CccccCCCCeEE
Q 008592 65 FPGPRIIAREG-DRLLIRVINNVKYN-----VTI--HWHGVRQL-------RSGWAD----GPAY-V-TQCPIQTGQSYV 123 (560)
Q Consensus 65 ~pGP~i~~~~G-d~v~v~~~N~l~~~-----~~i--H~HG~~~~-------~~~~~D----Gv~~-~-tq~~i~pG~~~~ 123 (560)
|--..|.|++| |+|+|+|+|....+ +++ --+|.... ....++ +-+. + ...-|.||++.+
T Consensus 15 F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~s 94 (129)
T 1cuo_A 15 YSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTS 94 (129)
T ss_dssp CSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEE
T ss_pred EccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEE
Confidence 33358999999 99999999986432 332 22331100 000001 0010 0 112478999999
Q ss_pred EEEEEc--ccCcceeEeeccccccccceEeEEEeC
Q 008592 124 YNFTVT--GQRGTLFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 124 Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
+.|+++ .++|+|||.|-..+.+.||.|-|+|.+
T Consensus 95 vtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 95 VKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 999973 289999999987777669999999963
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.12 E-value=1.5e-05 Score=66.01 Aligned_cols=77 Identities=13% Similarity=0.244 Sum_probs=53.2
Q ss_pred CCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccc
Q 008592 64 QFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW 143 (560)
Q Consensus 64 ~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~ 143 (560)
.|--..|+++.||+|++ .|.....+++....... |........+.||+++++.| +++|+|+|+|-.|.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 34347999999999765 48876666665543221 11001112478999999888 47999999998764
Q ss_pred ccccceEeEEEe
Q 008592 144 LRATLYGPIIIL 155 (560)
Q Consensus 144 ~~~Gl~G~liV~ 155 (560)
||.|.|+|+
T Consensus 98 ---~M~G~I~V~ 106 (106)
T 1id2_A 98 ---FMRGKVIVE 106 (106)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.3e-05 Score=86.41 Aligned_cols=86 Identities=16% Similarity=0.319 Sum_probs=70.2
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccce------eEeCCCCEEE
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNT------VGVPSGGWVA 509 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDT------v~vpp~g~v~ 509 (560)
++++++.|++|++.+.|.- ....+.+|.||-... + +.|-|- -.|+||+..+
T Consensus 98 P~I~~~~GD~v~V~v~N~l--~~~~tsIHwHGl~~~----~-----------------t~~~DGvp~vTq~pI~PG~sft 154 (580)
T 3sqr_A 98 PAIIADWGDNLIIHVTNNL--EHNGTSIHWHGIRQL----G-----------------SLEYDGVPGVTQCPIAPGDTLT 154 (580)
T ss_dssp CCEEEETTCEEEEEEEECC--SSCCBCEEETTCCCT----T-----------------CGGGSCCBTTTBCCBCTTCEEE
T ss_pred ceEEEeCCCEEEEEEEECC--CCCcceEEecccccC----C-----------------CccccCCCccccCCCCCCCeEE
Confidence 4589999999999999963 235789999998641 1 112222 2489999999
Q ss_pred EEEEecCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 510 IRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 510 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
.+|+++.+|.|.||||...+...||.+.+.|.++.
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCcc
Confidence 99999999999999999999999999999998764
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=1.4e-05 Score=67.95 Aligned_cols=75 Identities=15% Similarity=0.152 Sum_probs=49.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+|++. |... .+++..+ ...+-||... ....||++++|.| +.+|+|||+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f~--~~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTFI--PVDK-GHNVESI-----KDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHY-AMG 85 (123)
T ss_dssp SEEEECTTCEEEEE--ESSS-SCCCEEC-----TTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEEE--ECCC-CeEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCcc-cCC
Confidence 69999999997654 5433 3333332 1111233211 2346899988887 46999999997422 369
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999864
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=98.02 E-value=9.7e-06 Score=72.40 Aligned_cols=93 Identities=12% Similarity=0.034 Sum_probs=60.4
Q ss_pred CCCCcEEEE-ecCCEEEEEEEeCCCcC-----eeEEe--cCcccC------CCcCCCCCC----C-c-CccccCCCCeEE
Q 008592 64 QFPGPRIIA-REGDRLLIRVINNVKYN-----VTIHW--HGVRQL------RSGWADGPA----Y-V-TQCPIQTGQSYV 123 (560)
Q Consensus 64 ~~pGP~i~~-~~Gd~v~v~~~N~l~~~-----~~iH~--HG~~~~------~~~~~DGv~----~-~-tq~~i~pG~~~~ 123 (560)
+|--..|.| +.||+|+|+|+|....+ +++-+ +|.... ....++=++ . + ...-|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 444468999 99999999999987543 33222 221000 000001000 0 0 112479999999
Q ss_pred EEEEEc-ccCcceeEeeccccccccceEeEEEeC
Q 008592 124 YNFTVT-GQRGTLFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 124 Y~~~~~-~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
+.|+++ -++|+|||+|-..+++.||.|-|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 999873 279999999988776669999999963
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=6.8e-06 Score=88.15 Aligned_cols=101 Identities=15% Similarity=0.051 Sum_probs=75.0
Q ss_pred EEEECCCCCC----c-EEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCC----------CCcCccccCCCCe
Q 008592 58 IVTVNGQFPG----P-RIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGP----------AYVTQCPIQTGQS 121 (560)
Q Consensus 58 ~~~~ng~~pG----P-~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv----------~~~tq~~i~pG~~ 121 (560)
.|++||+... | .+.++.|+.+++.+.|... ..+.+|+||.........+|. +.-.-..|.||++
T Consensus 360 ~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~ 439 (534)
T 3abg_A 360 TWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRET 439 (534)
T ss_dssp TTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEE
T ss_pred eeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCE
Confidence 4789997532 3 4689999999999999874 599999999765433211231 0011124789999
Q ss_pred EEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCC
Q 008592 122 YVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQ 158 (560)
Q Consensus 122 ~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~ 158 (560)
.+.+|...+.+|.|.||||..... .||.+.|.|...+
T Consensus 440 v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 440 VVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 999998337899999999987665 8999999998765
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.01 E-value=1.8e-05 Score=84.71 Aligned_cols=79 Identities=16% Similarity=0.323 Sum_probs=63.4
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.+.++.|+.|+|.+.|........|.|+++++.+. ..+.||....+.|++
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEEC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEEC
Confidence 3468899999999999995421234799998875431 457889999999999
Q ss_pred cCceeeEEEee---chhhhhcccEEEEEEcCC
Q 008592 515 DNPGVWFMHCH---LEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 515 dnpG~w~~HCH---il~H~d~GMm~~~~V~~~ 543 (560)
+.||.|.|||| ...|. ||...+.|++.
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CSCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 99999999999 45675 99999999764
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=97.99 E-value=3.3e-05 Score=68.44 Aligned_cols=89 Identities=16% Similarity=0.304 Sum_probs=60.6
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCc---cceeEeCCCC--EEEE
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAE---RNTVGVPSGG--WVAI 510 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~---rDTv~vpp~g--~v~i 510 (560)
+.+.++.|++|.+.+.|.+ ....|-+-++.. + ..+.... ...+.. .-+..|.||+ ...+
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~~-------~-~~~~~~~------~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITKK-------G-PPYAVMP------VIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEESC-------C-SCCCSSC------CCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEeec-------C-cchhccc------cccccccccccccccCCCCceEEEE
Confidence 4689999999999999953 134566555521 1 0111000 000000 0112678999 9999
Q ss_pred EEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 511 RFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 511 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.|.+ .||.|.||||+.-|...||-..+.|+
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999 99999999999999999999999873
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=97.97 E-value=3.4e-05 Score=62.80 Aligned_cols=78 Identities=14% Similarity=0.124 Sum_probs=54.3
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC----cCccccCCCCeEEEEEEEcccCcceeEeeccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY----VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHIS 142 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~ 142 (560)
.+.|++++||+|++ .|.....+++....-.. -+|.-. .+...+.||++++++| +++|+|+|+|-.|
T Consensus 17 P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H 86 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPH 86 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhh
Confidence 37999999999655 58776777777664211 122210 0112478999999888 4799999999863
Q ss_pred cccccceEeEEEe
Q 008592 143 WLRATLYGPIIIL 155 (560)
Q Consensus 143 ~~~~Gl~G~liV~ 155 (560)
. .+||.|.|+|+
T Consensus 87 ~-~~gM~G~I~V~ 98 (98)
T 1iuz_A 87 A-GAGMKMTITVQ 98 (98)
T ss_dssp G-GGTCEEEEEEC
T ss_pred c-cCCCEEEEEEC
Confidence 2 36999999984
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.97 E-value=1.7e-05 Score=67.48 Aligned_cols=75 Identities=15% Similarity=0.208 Sum_probs=49.6
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+|++ .|... .+++..+ ...+-||.. ...+.||++++|.| +.+|+|||+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f--~n~~~-~H~v~~~-----~~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIKF--LPTDK-GHNVETI-----KGMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAPHY-MMG 85 (123)
T ss_dssp SEEEECTTCEEEE--ECSSS-SCCCEEC-----TTSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECSTTT-TTT
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEe-----cccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCcc-ccC
Confidence 6999999999654 55533 4333332 111123321 12357999988888 46999999997422 379
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=97.96 E-value=4.2e-05 Score=80.24 Aligned_cols=89 Identities=11% Similarity=0.161 Sum_probs=64.5
Q ss_pred eeEEEEECCCCCCcEEEEecCCEEEEEEEeCC---CcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 55 TKSIVTVNGQFPGPRIIAREGDRLLIRVINNV---KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 55 ~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l---~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
...+...+-.|-.+.|+|++||+|++.++|.. +..+++...++.. ..-+.||++.++.|++ ++
T Consensus 545 ~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI-------------K~DaiPGrtnsvtFta-dk 610 (638)
T 3sbq_A 545 RVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV-------------SMEISPQQTSSITFVA-DK 610 (638)
T ss_dssp EEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE-------------EEEECTTCEEEEEEEC-CS
T ss_pred EEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCCc-------------eeeeCCCCeEEEEEEc-CC
Confidence 33444555566668999999999999999974 3343333332211 1347899999999997 89
Q ss_pred CcceeEeeccccc--cccceEeEEEeCC
Q 008592 132 RGTLFWHAHISWL--RATLYGPIIILPK 157 (560)
Q Consensus 132 ~Gt~wYH~H~~~~--~~Gl~G~liV~~~ 157 (560)
+|+|||+|..... -.+|.|-|+|+++
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred CEEEEEECCCcCCCCcccceEEEEEecC
Confidence 9999999985322 2789999999864
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=97.89 E-value=4e-05 Score=63.26 Aligned_cols=72 Identities=17% Similarity=0.243 Sum_probs=50.5
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.. ...|.+|+|... .|. ..+ ++-.+.||+...+.| +.
T Consensus 34 ~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~~-~~~~~~pG~~~~~tf--~~ 84 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AAL-KGPMMKKEQAYSLTF--TE 84 (105)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SCE-ECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------ccc-cccccCCCCEEEEEe--CC
Confidence 5789999999985 543 368999988522 010 001 122367888766655 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||++ |. ||.+.+.|+
T Consensus 85 ~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 85 AGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999998 65 999999873
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=97.85 E-value=9e-05 Score=63.42 Aligned_cols=92 Identities=14% Similarity=0.131 Sum_probs=58.6
Q ss_pred CCCcEEEE-ecCCEEEEEEEeCCCcC-----eeEE--ecCcccC-------CCcCCC----CCCC-c-CccccCCCCeEE
Q 008592 65 FPGPRIIA-REGDRLLIRVINNVKYN-----VTIH--WHGVRQL-------RSGWAD----GPAY-V-TQCPIQTGQSYV 123 (560)
Q Consensus 65 ~pGP~i~~-~~Gd~v~v~~~N~l~~~-----~~iH--~HG~~~~-------~~~~~D----Gv~~-~-tq~~i~pG~~~~ 123 (560)
|--..|.| ++||+|+|+|+|....+ +++- -+|.... ....+| +-+. + ...-|.||++++
T Consensus 15 F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~s 94 (129)
T 2ccw_A 15 YNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS 94 (129)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred EecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEE
Confidence 33358999 99999999999987542 3332 2221000 000011 0010 0 112479999999
Q ss_pred EEEEEc-ccCcc-eeEeeccccccccceEeEEEeC
Q 008592 124 YNFTVT-GQRGT-LFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 124 Y~~~~~-~~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
..|+++ -.+|+ |||.|-..+.+.||.|.|+|.+
T Consensus 95 vtf~~~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 95 VTFDVSKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEEEGGGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EEEeccccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 999973 05665 9999987777779999999963
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.7e-05 Score=87.08 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=76.3
Q ss_pred eeEEEEECCCCC--CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCc-----------------------------
Q 008592 55 TKSIVTVNGQFP--GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSG----------------------------- 103 (560)
Q Consensus 55 ~~~~~~~ng~~p--GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~----------------------------- 103 (560)
....+.+|++.. ...+.++.|+.+++.|.|.....+-+|+||.+.....
T Consensus 457 ~~~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (612)
T 3gyr_A 457 RTKTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp CEEEEEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred ccccccccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccC
Confidence 345677777643 3678999999999999999999999999997553210
Q ss_pred -------CCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCC
Q 008592 104 -------WADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 104 -------~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 159 (560)
|-|- ..|+||+..+.+|+..+.+|.|.||||..... .||.+.+.|-+++.
T Consensus 537 ~~~~~~~~kDT------v~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 537 LAPNELGHKDV------FQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CCTTCSSCBSE------EEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccccCCCCcE------EEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 1121 23678888888888557899999999987665 89999999987654
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00011 Score=62.70 Aligned_cols=92 Identities=14% Similarity=0.150 Sum_probs=59.9
Q ss_pred CCCCcEEEE-ecCCEEEEEEEeCCCcC-----eeEEec--C---------ccc----CCCcCCCCCCCc-CccccCCCCe
Q 008592 64 QFPGPRIIA-REGDRLLIRVINNVKYN-----VTIHWH--G---------VRQ----LRSGWADGPAYV-TQCPIQTGQS 121 (560)
Q Consensus 64 ~~pGP~i~~-~~Gd~v~v~~~N~l~~~-----~~iH~H--G---------~~~----~~~~~~DGv~~~-tq~~i~pG~~ 121 (560)
+|--..|.| +.|++|+|+|+|....+ +++-+= + +.. .-.+..|.- .+ ...-|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~-~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDER-VIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTT-EEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccch-hhccceeeCCCCE
Confidence 344468999 99999999999987543 443321 1 000 000001110 00 0124799999
Q ss_pred EEEEEEEc-ccCcc-eeEeeccccccccceEeEEEeC
Q 008592 122 YVYNFTVT-GQRGT-LFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 122 ~~Y~~~~~-~~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
+++.|+++ -++|+ |+|.|-..+++.||.|.|+|.+
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEEeccccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 99999973 16885 9999988777779999999963
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=97.81 E-value=5.6e-05 Score=64.11 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=49.8
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+|++ .|... .++++... ..+-+|.. ...+.||++++|.| +++|+|||+|-.|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 6999999998655 56543 44444332 11122221 13457899999888 468999999987554
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999864
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00013 Score=62.23 Aligned_cols=92 Identities=10% Similarity=0.037 Sum_probs=59.0
Q ss_pred CCCCcEEEE-ecCCEEEEEEEeCCCcC-----eeEEe--cCccc-------CCCcCCCCCC----C-c-CccccCCCCeE
Q 008592 64 QFPGPRIIA-REGDRLLIRVINNVKYN-----VTIHW--HGVRQ-------LRSGWADGPA----Y-V-TQCPIQTGQSY 122 (560)
Q Consensus 64 ~~pGP~i~~-~~Gd~v~v~~~N~l~~~-----~~iH~--HG~~~-------~~~~~~DGv~----~-~-tq~~i~pG~~~ 122 (560)
+|--..|.| ++||+|+|+|+|....+ +++-+ .|... .....+|=++ . + .-.-|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 343368999 99999999999987543 44333 22110 0000011000 0 0 01237999999
Q ss_pred EEEEEEc-ccCcc-eeEeeccccccccceEeEEEe
Q 008592 123 VYNFTVT-GQRGT-LFWHAHISWLRATLYGPIIIL 155 (560)
Q Consensus 123 ~Y~~~~~-~~~Gt-~wYH~H~~~~~~Gl~G~liV~ 155 (560)
+..|+++ -.+|+ |||.|-..+++.||.|-|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 9999973 15777 999998877777999999984
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00032 Score=59.39 Aligned_cols=75 Identities=17% Similarity=0.171 Sum_probs=51.7
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+..+ ..|-+..+.. .+... .+.+.+.+|....+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeCC----------cCCCC-------------ccccccCCCCEEEEEe--CC
Confidence 4789999999998543 4676666421 11100 0122345777655554 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
||.|.|||- .|...||...+.|.++.
T Consensus 72 ~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 72 EGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 999999995 89999999999998653
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00026 Score=60.32 Aligned_cols=75 Identities=20% Similarity=0.253 Sum_probs=50.2
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|++.| ..|-+..+... +. .. ...+.+.||+...+. ++.
T Consensus 24 ~i~V~~GDtVtf~n~~------~~H~v~~~~~~----------~P-~g------------~~~f~s~pGet~s~T--F~~ 72 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKD------KGHNSALMKGG----------AP-EG------------AETWKGKINEEITVT--LSK 72 (127)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTTC----------SC-TT------------CCCCBCCTTCCCEEE--CCS
T ss_pred EEEECCCCEEEEEECC------CCceEEEccCc----------CC-CC------------ccceecCCCCEEEEE--eCC
Confidence 4789999999998765 24555443210 00 00 011223467654444 489
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
||.|.|||- .|...||...+.|.++.
T Consensus 73 pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 73 PGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 999999999 69999999999998754
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00051 Score=58.17 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=50.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|++.| ..|-+.++.. ... . .. +.+.+.||+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~P-~-g~-----------~~f~~~pg~t~s~TF--~~ 70 (123)
T 3erx_A 22 FVRAEPGDVINFVPTD------KSHNVEAIKE----------ILP-E-GV-----------ESFKSKINESYTLTV--TE 70 (123)
T ss_dssp EEEECTTEEEEEEESS------TTCCCEECTT----------SSC-T-TC-----------CCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCceEEEcCC----------cCC-C-Cc-----------cceecCCCCEEEEEe--CC
Confidence 4789999999998776 2455554421 000 0 00 112245677666555 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
||.|.|+|- .|...||...+.|.+
T Consensus 71 pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 71 PGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECC
Confidence 999999999 899999999999976
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0015 Score=52.78 Aligned_cols=80 Identities=20% Similarity=0.302 Sum_probs=53.4
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ...|-+.+.... +. ...+. ...-.+...+.+|....+.| +.
T Consensus 19 ~i~v~~GdtV~~~--n~~---~~~H~v~~~~~~----------~p-----~g~~~-~~~~~~~~~~~~g~~~~~tf--~~ 75 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNA---GFPHNIVFDEDA----------VP-----AGVDA-DAISYDDYLNSKGETVVRKL--ST 75 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECTTS----------SC-----TTCCH-HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEeCCC----------Cc-----ccccc-ccccccccccCCCCEEEEEc--CC
Confidence 4789999999996 432 357776655311 00 00000 00012346788998777765 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|+|-+ |..+||...+.|+
T Consensus 76 ~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 76 PGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CEEEEEEchh--hccCCCEEEEEEC
Confidence 9999999985 9999999999873
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0022 Score=52.79 Aligned_cols=72 Identities=19% Similarity=0.184 Sum_probs=49.1
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ...|-+++....- +. . . -++-.+.+|....+.| +.
T Consensus 35 ~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~~-------~~-------~-------~-~~s~~l~~g~~~~~tf--~~ 85 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-------GE-------D-------A-FRGEMMTKDQAYAITF--NE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTTS-------SS-------S-------C-EECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCcEEEEEeCCCC-------Cc-------c-------c-ccccccCCCCEEEEEe--CC
Confidence 4789999999997 543 3577766543210 00 0 0 1233467887777666 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|+|-+ |. ||.+.+.|+
T Consensus 86 ~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 86 AGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999987 76 999999873
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0032 Score=54.05 Aligned_cols=72 Identities=19% Similarity=0.182 Sum_probs=49.7
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ...|-+++.... .|. .. -++-.+.+|+...+.| +.
T Consensus 61 ~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~-~~s~~l~pG~t~~~tF--~~ 111 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE--------------DA-FRGEMMTKDQAYAITF--NE 111 (132)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SC-EECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CCc--------------cc-ccccccCCCCEEEEEc--CC
Confidence 4789999999986 543 357877764321 000 01 1233467888777666 79
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||-+ |. ||...+.|+
T Consensus 112 ~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 112 AGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--Cc--CCEEEEEEC
Confidence 9999999986 76 999999873
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0066 Score=50.99 Aligned_cols=88 Identities=10% Similarity=0.126 Sum_probs=54.2
Q ss_pred CCCcEEEEec-CCEEEEEEEeCCCcC-----eeEEe-----------cCcccCCC-cCC-CCCCCc--CccccCCCCeEE
Q 008592 65 FPGPRIIARE-GDRLLIRVINNVKYN-----VTIHW-----------HGVRQLRS-GWA-DGPAYV--TQCPIQTGQSYV 123 (560)
Q Consensus 65 ~pGP~i~~~~-Gd~v~v~~~N~l~~~-----~~iH~-----------HG~~~~~~-~~~-DGv~~~--tq~~i~pG~~~~ 123 (560)
|--..|.|+. |++|+|+|+|....+ +++=+ -|+..-+. .+. .+-+.+ ...-|.||++++
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 3446899986 999999999987432 33221 11211000 101 011111 112379999999
Q ss_pred EEEEEc--ccCcceeEeeccccccccceEeEEEe
Q 008592 124 YNFTVT--GQRGTLFWHAHISWLRATLYGPIIIL 155 (560)
Q Consensus 124 Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 155 (560)
..|+.+ .++|+|.|.|- +.+ ||.|-++|.
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 999974 27999999999 444 999999983
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0044 Score=52.40 Aligned_cols=74 Identities=15% Similarity=0.238 Sum_probs=48.3
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|+..+ ..|-+.++- + ..+.. .. .+.+.+|.... +.++.
T Consensus 22 ~i~V~~GdtV~f~~~~------~~H~v~~~~----------~-~~p~~-~~-----------~~~~~pG~t~~--~tF~~ 70 (123)
T 1paz_A 22 YIKANPGDTVTFIPVD------KGHNVESIK----------D-MIPEG-AE-----------KFKSKINENYV--LTVTQ 70 (123)
T ss_dssp EEEECTTCEEEEEESS------SSCCCEECT----------T-CSCTT-CC-----------CCBCCTTCCEE--EECCS
T ss_pred EEEECCCCEEEEEECC------CCeEEEEec----------c-cCCCC-cc-----------ceecCCCCEEE--EEeCC
Confidence 4789999999987553 245555431 0 00000 00 12234676544 44589
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
||.|.|+|- .|..+||...+.|.++
T Consensus 71 ~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 71 PGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 999999997 5999999999999763
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0046 Score=52.26 Aligned_cols=38 Identities=24% Similarity=0.350 Sum_probs=30.8
Q ss_pred eCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 502 VPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 502 vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
+.+|....+ .++.||.|.|+|- .|...||...+.|.++
T Consensus 58 ~~pG~t~~~--tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVV--KFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEE--ECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEEE--EeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 457776554 4589999999997 5999999999999763
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0079 Score=63.26 Aligned_cols=79 Identities=18% Similarity=0.281 Sum_probs=61.6
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
..+.++.|+.|+|++.|........|.|-+.+... -+.+.||....+.|.++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI----------------------------K~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV----------------------------SMEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc----------------------------eeeeCCCCeEEEEEEcC
Confidence 35789999999999999532124678887765432 23577888999999999
Q ss_pred CceeeEEEeechhhh-hcccEEEEEEcC
Q 008592 516 NPGVWFMHCHLEVHT-SWGLKMAWIVND 542 (560)
Q Consensus 516 npG~w~~HCHil~H~-d~GMm~~~~V~~ 542 (560)
.||.|.+||...-|. +.+|...+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999986664 468999998865
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.018 Score=49.37 Aligned_cols=74 Identities=14% Similarity=0.239 Sum_probs=52.9
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..|.+..|++|++.++|.. .. |+...+.. |. ..-+.||+.-++.|+. +++|+|+|+|.- .+..
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~~----~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETTS----SC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecCC----Cc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 33 44433321 11 1346789988888986 899999999953 1222
Q ss_pred ccceEeEEEeC
Q 008592 146 ATLYGPIIILP 156 (560)
Q Consensus 146 ~Gl~G~liV~~ 156 (560)
.+|.|-++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 68999998863
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=96.27 E-value=0.023 Score=50.53 Aligned_cols=74 Identities=14% Similarity=0.252 Sum_probs=55.0
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..|.+..|++|++.++|. +..++...-++.. +.-+.||+..+..|.. +++|+|++.|.- .|..
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi-------------k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGTNI-------------NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTSSC-------------EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCCCe-------------EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 579999999999999997 4443333322211 1335789988999987 899999999983 4444
Q ss_pred ccceEeEEEeC
Q 008592 146 ATLYGPIIILP 156 (560)
Q Consensus 146 ~Gl~G~liV~~ 156 (560)
++|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 79999999974
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0083 Score=53.36 Aligned_cols=89 Identities=8% Similarity=0.082 Sum_probs=60.3
Q ss_pred EEe-cCCCEEEEEEeeCCcC--ccCCCceeecCcceEEEEeCC-----------C--CCCCCCCCCCCCCCCCCccceeE
Q 008592 438 VVL-PFNASVEVVMQDTSII--VAESHPLHLHGFNFFVVAQGF-----------G--NFDPNKDPAKFNLVDPAERNTVG 501 (560)
Q Consensus 438 ~~~-~~g~~ve~~i~N~~~~--~~~~HP~HlHG~~F~Vl~~~~-----------g--~~~~~~~~~~~~~~~p~~rDTv~ 501 (560)
+.+ +.|+.|.|++.|.+.. ..+.|- |-+...+. + .|-+.. ..-....+..
T Consensus 60 itV~kaG~~Vtv~~~N~g~~p~~~m~Hn-------~vi~~~~~~~~v~~~~m~~~~~~~v~~~-------d~~vl~~t~~ 125 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQPKASMGHN-------LVIAKAEDMDGVFKDGVGAADTDYVKPD-------DARVVAHTKL 125 (167)
T ss_dssp EEEETTCSSEEEEEEECSCSCHHHHCBC-------CEEEEGGGHHHHHHHHGGGGGGTTSCTT-------CTTEEEECCC
T ss_pred EEEecCCCEEEEEEEECCCCccccccce-------EEeccCcchhhhHHHhhhcccccccccc-------ccchhcccee
Confidence 788 8999999999997531 012344 43333210 0 000000 0012344667
Q ss_pred eCCCCEEEEEEEec--CceeeEEEeechhhhhcccEEEEEEc
Q 008592 502 VPSGGWVAIRFLAD--NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 502 vpp~g~v~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
|.||+...|.|.++ .||.|-|+|-+--|.. ||-..+.|.
T Consensus 126 l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 126 IGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp BCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 89999999999987 8999999999999988 999999885
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.025 Score=48.48 Aligned_cols=70 Identities=21% Similarity=0.319 Sum_probs=51.9
Q ss_pred EEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCc
Q 008592 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517 (560)
Q Consensus 438 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 517 (560)
+.++.|+.|+|++.|.. ..|. |.|-+. + --+.+.||....+.|.++.|
T Consensus 62 l~Vp~G~~V~~~vts~D----V~Hs-------f~ip~~--------------~-------~k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD----VIHG-------FHVEGT--------------N-------INVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBSS----SCEE-------EEETTS--------------S-------CEEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeCC----ccce-------EEecCC--------------C-------ceeEeCCCCcEEEEEEcCCC
Confidence 78999999999998842 3444 433110 0 02456778888899999999
Q ss_pred eeeEEEeec---hhhhhcccEEEEEEc
Q 008592 518 GVWFMHCHL---EVHTSWGLKMAWIVN 541 (560)
Q Consensus 518 G~w~~HCHi---l~H~d~GMm~~~~V~ 541 (560)
|.|.++|.. ..| .+|-..+.|.
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999987 566 5898888875
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=96.03 E-value=0.019 Score=48.32 Aligned_cols=72 Identities=15% Similarity=0.184 Sum_probs=46.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|+..+ ..|-+++... .+... . ..+.+.+|+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~n~d------~~H~v~~~~~----------~~p~~--~-----------~~~~~~~g~t~~~tF--~~ 70 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPTD------KGHNVETIKG----------MIPDG--A-----------EAFKSKINENYKVTF--TA 70 (122)
T ss_dssp EEEECTTEEEEEEESS------SSCCCEECTT----------CSCTT--C-----------CCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCcEEEEccc----------ccCCC--c-----------ceeecCCCCEEEEEe--CC
Confidence 4789999999997432 2566665531 11000 0 012235677655555 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
||.|.|+|-+ |.. |.+.+.|.+.
T Consensus 71 ~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 71 PGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp CEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 9999999976 766 9999999763
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.018 Score=48.95 Aligned_cols=95 Identities=14% Similarity=0.154 Sum_probs=61.1
Q ss_pred EEEecCC-CEEEEEEeeCCcCc--cCCCceeecCcceEEEEeCCCCCCCC-----CCCCCCCC---CCC-CccceeEeCC
Q 008592 437 VVVLPFN-ASVEVVMQDTSIIV--AESHPLHLHGFNFFVVAQGFGNFDPN-----KDPAKFNL---VDP-AERNTVGVPS 504 (560)
Q Consensus 437 ~~~~~~g-~~ve~~i~N~~~~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~-----~~~~~~~~---~~p-~~rDTv~vpp 504 (560)
.+.++.| +.|.+++.|.+... .+.|- |-+...+. ++.. ......++ .++ ....+..|.|
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~p 89 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEECC
Confidence 4789999 99999999975311 12354 43333220 0000 00000000 001 1234667899
Q ss_pred CCEEEEEEEec---CceeeEEEeechhhhhcccEEEEEEc
Q 008592 505 GGWVAIRFLAD---NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 505 ~g~v~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
|+...+.|.++ .||.|-|.|-+--|.. ||-..+.|+
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 99999999997 9999999999988988 899999885
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=95.04 E-value=0.066 Score=45.45 Aligned_cols=43 Identities=16% Similarity=0.204 Sum_probs=37.7
Q ss_pred ceeEeCCCCEEEEEEEec--Ccee-eEEEeechhhhhcccEEEEEEc
Q 008592 498 NTVGVPSGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 498 DTv~vpp~g~v~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.+..|.||+...|.|.++ .||. |-|.|-+--|.. ||-..+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 456789999999999998 7866 999999999988 899999885
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.086 Score=44.62 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=38.6
Q ss_pred cceeEeCCCCEEEEEEEec--Ccee-eEEEeechhhhhcccEEEEEEc
Q 008592 497 RNTVGVPSGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 497 rDTv~vpp~g~v~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 541 (560)
..|..|.||+...+.|.+. .||. |-|.|-+--|.. ||-..+.|.
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 3466789999999999998 8995 999999999988 999999885
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=94.48 E-value=0.19 Score=44.58 Aligned_cols=72 Identities=19% Similarity=0.307 Sum_probs=55.5
Q ss_pred EEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCc
Q 008592 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517 (560)
Q Consensus 438 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 517 (560)
+.++.|+.|+|.+.|. +..|.|-+=.... -+.+.||....+.|.++.|
T Consensus 95 l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP----DVIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECS----SSCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecC----CceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCCC
Confidence 7899999999999984 3577665533221 2345678888899999999
Q ss_pred eeeEEEeec-hhhhhcccEEEEEEc
Q 008592 518 GVWFMHCHL-EVHTSWGLKMAWIVN 541 (560)
Q Consensus 518 G~w~~HCHi-l~H~d~GMm~~~~V~ 541 (560)
|.|.+.|.. --+.+.+|...+.|+
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEe
Confidence 999999986 445678999999885
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=94.25 E-value=0.18 Score=42.63 Aligned_cols=94 Identities=13% Similarity=0.136 Sum_probs=59.4
Q ss_pred EEEe-cCCCEEEEEEeeCCcCc--cCCCceeecCcceEEEEeCCC------CCCCCCCCCCCCCC---CC-CccceeEeC
Q 008592 437 VVVL-PFNASVEVVMQDTSIIV--AESHPLHLHGFNFFVVAQGFG------NFDPNKDPAKFNLV---DP-AERNTVGVP 503 (560)
Q Consensus 437 ~~~~-~~g~~ve~~i~N~~~~~--~~~HP~HlHG~~F~Vl~~~~g------~~~~~~~~~~~~~~---~p-~~rDTv~vp 503 (560)
.+.+ +.|++|.+++.|.+... .+.|-|-| ...+.- .... ....++. ++ ....|..|.
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~---~~~~~~~~~~~~~~~~~t~~l~ 88 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSA---GIDKQYLKDGDARVIAHTKVIG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTT---CGGGTTSCTTCTTEEEECCCBC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhc---cccccccccccchhheeeeeeC
Confidence 3788 89999999999975310 11354433 322100 0000 0000111 11 123455689
Q ss_pred CCCEEEEEEEec--Ccee-eEEEeechhhhhcccEEEEEEc
Q 008592 504 SGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 504 p~g~v~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||+...+.|.+. .||. |-|.|-+--|.. ||-..+.|+
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 89 AGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 999999999997 7876 999999999988 899999873
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=93.00 E-value=0.4 Score=40.07 Aligned_cols=96 Identities=14% Similarity=0.203 Sum_probs=58.4
Q ss_pred EEEecC-CCEEEEEEeeCCcCccCCCceeecCcceEEEEeCC--CCC-CC-CCCC-CCC-C-CCCCCccceeEeCCCCEE
Q 008592 437 VVVLPF-NASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGF--GNF-DP-NKDP-AKF-N-LVDPAERNTVGVPSGGWV 508 (560)
Q Consensus 437 ~~~~~~-g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~--g~~-~~-~~~~-~~~-~-~~~p~~rDTv~vpp~g~v 508 (560)
-+.++. |+.|++++.|.+.+ |--.=||.|-+...+. +.. +. ...+ ..| . -+......|..|.||+..
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 377865 99999999997632 1111244555543210 000 00 0000 011 0 012244567789999999
Q ss_pred EEEEEec---CceeeEEEeechhhhhcccEEEEEEc
Q 008592 509 AIRFLAD---NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 509 ~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.|.|.+. .+|.|-|-|- -|. ||-..+.|+
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999987 8999999999 888 999999873
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 560 | ||||
| d1aoza3 | 214 | b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C | 3e-48 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 9e-34 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 8e-04 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 1e-33 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 1e-04 | |
| d1hfua1 | 131 | b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin | 2e-33 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 4e-33 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 9e-05 | |
| d2q9oa3 | 216 | b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce | 4e-28 | |
| d1gyca3 | 199 | b.6.1.3 (A:301-499) Laccase {Trametes versicolor, | 3e-27 | |
| d1hfua3 | 200 | b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr | 5e-26 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 5e-25 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 0.003 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 5e-24 | |
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 4e-23 | |
| d1v10a3 | 190 | b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus | 5e-23 | |
| d1gska3 | 154 | b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba | 1e-22 | |
| d2j5wa1 | 192 | b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie | 5e-22 | |
| d1kv7a1 | 140 | b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch | 2e-21 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 2e-21 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 5e-21 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 0.002 | |
| d2j5wa3 | 207 | b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap | 8e-20 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 1e-19 | |
| d1gska1 | 181 | b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci | 3e-19 | |
| d1sdda1 | 180 | b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t | 7e-19 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 2e-18 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 1e-17 | |
| d2bw4a1 | 157 | b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige | 3e-17 | |
| d1mzya1 | 153 | b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba | 5e-17 | |
| d2j5wa4 | 179 | b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap | 2e-16 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 5e-16 | |
| d1kv7a3 | 181 | b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc | 3e-15 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 6e-12 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 5e-11 | |
| d2j5wa5 | 149 | b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa | 5e-11 | |
| d2j5wa5 | 149 | b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa | 7e-10 | |
| d1kcwa2 | 146 | b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap | 3e-10 | |
| d1kcwa2 | 146 | b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap | 1e-07 | |
| d1gska2 | 174 | b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba | 5e-10 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 2e-09 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 8e-08 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 5e-08 | |
| d1sdda2 | 116 | b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos | 9e-08 | |
| d1sdda2 | 116 | b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos | 2e-07 | |
| d2bw4a2 | 173 | b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcali | 2e-06 | |
| d1sddb1 | 67 | b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (B | 2e-05 | |
| d1fwxa1 | 132 | b.6.1.4 (A:452-581) Nitrous oxide reductase, C-ter | 2e-04 | |
| d1kbva2 | 151 | b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisse | 4e-04 | |
| d1oe1a2 | 177 | b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcali | 8e-04 | |
| d1qhqa_ | 139 | b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus | 0.002 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 165 bits (417), Expect = 3e-48
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 346 PMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKG 405
P+K +RR F Q N + ++N+VS P L A +N
Sbjct: 2 PVKFNRRIFLL------------NTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLL-H 48
Query: 406 VYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSII---VAESHP 462
+ + P + TPP+N G V V+V++Q+ +++ ++E+HP
Sbjct: 49 AFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHP 108
Query: 463 LHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFM 522
HLHG +F+V+ G G F + + NL +P RNTV + GW AIRF+ADNPGVW
Sbjct: 109 WHLHGHDFWVLGYGDGKFSAE-EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAF 167
Query: 523 HCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
HCH+E H G+ + + +K+ P+ C
Sbjct: 168 HCHIEPHLHMGMGVVFAEGV-----EKVGRIPTKALAC 200
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 122 bits (308), Expect = 9e-34
Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 37 TRHYKFHIKMQNITRLC-QTKSIVTVNGQFPGPRIIAREGDRLLIRVIN-----NVKYNV 90
T HI N+ +S VT G P I DR I VI+ N++
Sbjct: 2 TVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRAT 61
Query: 91 TIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LY 149
+IHWHG Q + DGPA+V QCPI +S+VY+F V GQ GT ++H+H+S L
Sbjct: 62 SIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLR 121
Query: 150 GPIIILPK 157
G ++
Sbjct: 122 GAFVVYDP 129
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 37.7 bits (87), Expect = 8e-04
Identities = 24/127 (18%), Positives = 39/127 (30%), Gaps = 23/127 (18%)
Query: 425 PPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNK 484
I + + + V+ Q T + + +H HGF + G
Sbjct: 32 IAPLITGNIDDRFQI-------NVIDQLTDANMRRATSIHWHGFFQAGTTEMDG------ 78
Query: 485 DPAKFNLVDPAERNTVGVPSGGWVAIRFLA-DNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543
PA N + F+ G ++ H HL GL+ A++V D
Sbjct: 79 ---------PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDP 129
Query: 544 KGPKQKL 550
P L
Sbjct: 130 NDPHLSL 136
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 122 bits (306), Expect = 1e-33
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 36 ITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYN-----V 90
I + ++ + + VNG FP P I ++GDR + V++ + +
Sbjct: 2 IGPAASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKST 61
Query: 91 TIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LY 149
+IHWHG Q + WADGPA+V QCPI +G S++Y+F V Q GT ++H+H+S L
Sbjct: 62 SIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLR 121
Query: 150 GPIIILPKQ 158
GP ++ +
Sbjct: 122 GPFVVYDPK 130
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 40.0 bits (93), Expect = 1e-04
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 446 VEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSG 505
+ VV T+ + +S +H HGF G PA N + SG
Sbjct: 46 LNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADG---------------PAFVNQCPIASG 90
Query: 506 GWVAIRF-LADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544
F + D G ++ H HL GL+ ++V D K
Sbjct: 91 HSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 121 bits (305), Expect = 2e-33
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 42 FHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-----YNVTIHWHG 96
+ N++ T++ + VNG GP I + D + V+N++ +IHWHG
Sbjct: 9 MTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHG 67
Query: 97 VRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LYGPIIIL 155
+ Q + WADG V QCPI G +++Y FT G GT ++H+H L GP++I
Sbjct: 68 LFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIY 127
Query: 156 PKQ 158
Sbjct: 128 DDN 130
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 120 bits (303), Expect = 4e-33
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 37 TRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVT-IHWH 95
RHYK+ ++ C ++ +NGQFPGP I A GD +++ + N + IHWH
Sbjct: 3 IRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWH 62
Query: 96 GVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA-TLYGPIII 154
G+ Q + WADG A ++QC I G+++ YNFTV GT F+H H+ R+ LYG +I+
Sbjct: 63 GILQRGTPWADGTASISQCAINPGETFFYNFTVD-NPGTFFYHGHLGMQRSAGLYGSLIV 121
Query: 155 LPKQ 158
P Q
Sbjct: 122 DPPQ 125
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 40.1 bits (93), Expect = 9e-05
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 15/102 (14%)
Query: 447 EVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGG 506
VV++ T+ + E +H HG G A + + G
Sbjct: 43 SVVVELTNKLHTEGVVIHWHGILQRGTPWADG---------------TASISQCAINPGE 87
Query: 507 WVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQ 548
F DNPG +F H HL + S GL + IV+ +G K+
Sbjct: 88 TFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKE 129
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 109 bits (273), Expect = 4e-28
Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 25/175 (14%)
Query: 410 DFPANPPFKFNYTGTP-------PSNIMVSSGTK-------VVVLPFNASVE--VVMQDT 453
D P F + G+ P + +G +V + ++ D
Sbjct: 21 DLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDP 80
Query: 454 SIIVAESHPLHLHGFNFFVVAQGFG---------NFDPNKDPAKFNLVDPAERNTVGVPS 504
+ HP+HLHG +F V+ + FDP D A+ N +P R+T +P+
Sbjct: 81 EGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPA 140
Query: 505 GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPK 559
GGW+ + F DNPG W HCH+ H S GL + ++ ++ D +
Sbjct: 141 GGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDFNR 195
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 106 bits (266), Expect = 3e-27
Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 29/180 (16%)
Query: 381 SVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVL 440
+NN SF P V +L A G+ V L
Sbjct: 38 FINNASFTPPTVPVLLQILSG-----------AQTAQDLLPAGS------------VYPL 74
Query: 441 PFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTV 500
P ++++E+ + T++ HP HLHG F VV DP ++ +T
Sbjct: 75 PAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDV-----VSTG 129
Query: 501 GVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
+G V IRF DNPG WF+HCH++ H G + + + P P + C
Sbjct: 130 TPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADVK-AANPVPKAWSDLC 188
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 103 bits (257), Expect = 5e-26
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 408 TTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHG 467
+ P+ P +G +N ++ +G+ V LP N VE+V+ + HP HLHG
Sbjct: 43 AYESPSVPTLLQIMSGAQSANDLLPAGS-VYELPRNQVVELVVPAGVLG--GPHPFHLHG 99
Query: 468 FNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVP-SGGWVAIRFLADNPGVWFMHCHL 526
F VV + +N V+P +R+ V + +G V IRF+ DNPG WF HCH+
Sbjct: 100 HAFSVVRSA--------GSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHI 151
Query: 527 EVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
E H GL + + + PP C
Sbjct: 152 EFHLMNGLAIVFAEDMANTV-DANNPPVEWAQLC 184
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 99.4 bits (247), Expect = 5e-25
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 35 GITRHYKFHIKMQNITRL---CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNV-KYNV 90
G+T+ Y F++ + + ++ +NG GP I+A GD + + VINN+
Sbjct: 31 GVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGT 90
Query: 91 TIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LY 149
+IHWHG+ Q + DG VT+CPI Q GT ++H+H S +
Sbjct: 91 SIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVV 150
Query: 150 GPIIILPKQQASYP 163
G I I AS P
Sbjct: 151 GTIQINGP--ASLP 162
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 36.2 bits (83), Expect = 0.003
Identities = 10/49 (20%), Positives = 14/49 (28%)
Query: 494 PAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542
P GG R+ A G + H H G+ +N
Sbjct: 109 NGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQING 157
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 96.7 bits (240), Expect = 5e-24
Identities = 31/150 (20%), Positives = 49/150 (32%), Gaps = 24/150 (16%)
Query: 169 EEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPG 228
I +W+ + + + AP D INGL N +A + V G
Sbjct: 6 ASTVITIADWYHSLSTVLFP---NPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSG 62
Query: 229 KTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--------------------KAP 268
K Y R+++ + FSI H +T++E D V +
Sbjct: 63 KRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQA 122
Query: 269 NANFLIAARPYATGPASFDNTTTAGVLEYD 298
N+ I A P G F + + Y
Sbjct: 123 VGNYWIRANPS-NGRNGFTGGINSAIFRYQ 151
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 95.3 bits (236), Expect = 4e-23
Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 45/208 (21%)
Query: 169 EEVPIIFGEWWKADTETIINEAMQTGG-----------------APNISDAFTINGLPGP 211
E+ ++ +WW +I+ + N P
Sbjct: 6 GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCK 65
Query: 212 FYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAK------- 264
+ + V+P KTY +R+ + L F+I NH L +VE D Y +
Sbjct: 66 LKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDI 125
Query: 265 --------------SKAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPL 310
+ P+ N+ ++ A + +L Y + LP
Sbjct: 126 DIYSGESYSVLITTDQNPSENYWVSVGTRA---RHPNTPPGLTLLNYL---PNSVSKLPT 179
Query: 311 LKPAAILPKFNDTNFVMQFSKKIRSLAT 338
P P ++D + F+ +I +
Sbjct: 180 SPPPQ-TPAWDDFDRSKNFTYRITAAMG 206
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 94.6 bits (234), Expect = 5e-23
Identities = 53/217 (24%), Positives = 76/217 (35%), Gaps = 52/217 (23%)
Query: 345 VPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSK 404
VP D +G N T ++N F+ P V +L
Sbjct: 18 VPGGADINLNLRIGR--------------NATTADFTINGAPFIPPTVPVLLQILSG--- 60
Query: 405 GVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLH 464
P G V+ LP N +E+ + +HP H
Sbjct: 61 --------VTNPNDLLPGGA------------VISLPANQVIEISIPGG-----GNHPFH 95
Query: 465 LHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGG-WVAIRFLADNPGVWFMH 523
LHG NF VV + +N V+P R+ V + GG V RF+ DNPG WF+H
Sbjct: 96 LHGHNFDVVRTP--------GSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLH 147
Query: 524 CHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560
CH++ H GL + + + P P+ C
Sbjct: 148 CHIDWHLEAGLAVVFAEDIPNIPIA-NAISPAWDDLC 183
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 92.4 bits (229), Expect = 1e-22
Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 10/95 (10%)
Query: 458 AESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAE---------RNTVGVPSGGWV 508
+HP+HLH +F V+ + + ++ + + PA ++T+ +G +
Sbjct: 60 RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVL 119
Query: 509 AIRF-LADNPGVWFMHCHLEVHTSWGLKMAWIVND 542
I G + HCH+ H + + + D
Sbjct: 120 RIAATFGPYSGRYVWHCHILEHEDYDMMRPMDITD 154
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.7 bits (227), Expect = 5e-22
Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 18/116 (15%)
Query: 65 FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWAD------GPAYVTQCPIQT 118
F GP I A GD++ + + N T H HG+ + +
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYP 132
Query: 119 GQSYVYNFTVTGQR---------GTLFWHAHISWLRAT---LYGPIIILPKQQASY 162
G+ Y Y T ++ T +H+HI + L GP+II K
Sbjct: 133 GEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDK 188
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 88.6 bits (219), Expect = 2e-21
Identities = 27/127 (21%), Positives = 43/127 (33%), Gaps = 10/127 (7%)
Query: 37 TRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHG 96
+ I T +T + NG GP + + G + + + N + T+HWHG
Sbjct: 15 RNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHG 74
Query: 97 VRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-----LYGP 151
+ G DG Q I G V T ++H H L G
Sbjct: 75 LEV--PGEVDGG---PQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGL 129
Query: 152 IIILPKQ 158
++I +
Sbjct: 130 VVIEDDE 136
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 89.8 bits (222), Expect = 2e-21
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 24/151 (15%)
Query: 169 EEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPG 228
+ +++ + +++ AP SD ING N + +TPG
Sbjct: 4 DLGVFPITDYYYRAADDLVHFTQ--NNAPPFSDNVLINGT-AVNPNTGEGQYANVTLTPG 60
Query: 229 KTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--------------------KAP 268
K + LR++N + + S+ NHT+T++ D V +
Sbjct: 61 KRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRA 120
Query: 269 NANFLIAARPYATGPAS-FDNTTTAGVLEYD 298
N+ N A + Y
Sbjct: 121 PDNYWFNVTFGGQAACGGSLNPHPAAIFHYA 151
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 87.9 bits (217), Expect = 5e-21
Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 11/114 (9%)
Query: 55 TKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQC 114
T +T NG PGP ++ EGD + + ++N H V + A G
Sbjct: 52 TLQAMTFNGSMPGPTLVVHEGDYVQLTLVN---PATNAMPHNVEFHGATGALG--GAKLT 106
Query: 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-----LYGPIIILPKQQASYP 163
+ G+ F + GT +H + + G +++LP+ P
Sbjct: 107 NVNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDP 159
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 37.0 bits (85), Expect = 0.002
Identities = 24/129 (18%), Positives = 35/129 (27%), Gaps = 28/129 (21%)
Query: 434 GTKVVVLPFNASV-----EVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAK 488
GT + + FN S+ V D + + + N
Sbjct: 50 GTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFHGATGALGGAKLTN-- 107
Query: 489 FNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSW----GLKMAWIVNDGK 544
V G +RF AD G + HC E W G+ +V
Sbjct: 108 -------------VNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVL--- 151
Query: 545 GPKQKLPPP 553
P+ L P
Sbjct: 152 -PRDGLKDP 159
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.9 bits (212), Expect = 8e-20
Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 22/118 (18%)
Query: 62 NGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQL----------RSGWADGPAYV 111
+ GP I A GD + + N Y ++I GVR
Sbjct: 80 HLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPP 139
Query: 112 TQCPIQTGQSYVYNFTVTGQRG---------TLFWHAHISWLRAT---LYGPIIILPK 157
+ + +++ Y +TV + G +++ + + L GP+ I K
Sbjct: 140 SASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKK 197
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 84.4 bits (208), Expect = 1e-19
Identities = 38/169 (22%), Positives = 56/169 (33%), Gaps = 32/169 (18%)
Query: 169 EEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPG 228
E I +W+ +I A DA ING G + A + + V G
Sbjct: 11 ENTIITLADWYHIPAPSIQGAAQ--------PDATLINGK-GRYVGGPAAELSIVNVEQG 61
Query: 229 KTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--------------------KAP 268
K Y +R+I+ + + FSI H LTI+E D + P
Sbjct: 62 KKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQP 121
Query: 269 NANFLIAARPYATGP---ASFDNTTTAGVLEYDQPNGITTKNLPLLKPA 314
N+ I A+P +F N + +L Y PA
Sbjct: 122 VDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPA 170
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 83.3 bits (205), Expect = 3e-19
Identities = 32/171 (18%), Positives = 58/171 (33%), Gaps = 32/171 (18%)
Query: 21 ALWILSELALAKHEGITRHYKFHIK--MQNITRLCQTKSIVTVNGQFPGPRIIAREGDRL 78
AL I L + +Y+ ++ + R + NG FPGP I + + +
Sbjct: 8 ALPIPDTLKPVQQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENV 67
Query: 79 LIRVINN----------------------VKYNVTIHWHGVRQLRSGWADGPAYVTQCPI 116
++ +NN + +H HG A+ ++
Sbjct: 68 YVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFE 127
Query: 117 QTG---QSYVYNFTVTGQRGTLFWHAHISWLRAT-----LYGPIIILPKQQ 159
QTG + VY++ + L++H H L L G II ++
Sbjct: 128 QTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 178
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 82.4 bits (203), Expect = 7e-19
Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 65 FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVR----QLRSGWADGPAYVTQC--PIQT 118
GP + A GD + + N ++IH G++ + ++D + + +
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 119 GQSYVYNFTVTGQR---------GTLFWHAHISWLRAT---LYGPIIILPKQQASY 162
GQ Y Y + ++ T ++++++ + L GP++I K +
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTE 172
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 80.5 bits (198), Expect = 2e-18
Identities = 35/170 (20%), Positives = 57/170 (33%), Gaps = 32/170 (18%)
Query: 169 EEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPG 228
E I +W+ A P +DA INGL G + + V G
Sbjct: 12 ESTVITLTDWYH-------TAARLGPRFPLGADATLINGL-GRSASTPTAALAVINVQHG 63
Query: 229 KTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--------------------KAP 268
K Y R+++ + + FSI H LT++E D + ++
Sbjct: 64 KRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQT 123
Query: 269 NANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILP 318
N+ I A P G F + +L Y G + +++P
Sbjct: 124 VGNYWIRANPN-FGTVGFAGGINSAILRYQ---GAPVAEPTTTQTTSVIP 169
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 77.8 bits (191), Expect = 1e-17
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 10/108 (9%)
Query: 55 TKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQC 114
T +G PG I REGD + + NN + H V + G
Sbjct: 45 EYRYWTFDGDVPGRMIRVREGDTVEVEFSNN---PSSTVPHNVDFHAATGQGGG--AAAT 99
Query: 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISWLR----ATLYGPIIILPKQ 158
G++ ++F Q G +H ++ + +YG I++ PK+
Sbjct: 100 FTAPGRTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMYGLILVEPKE 146
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 77.1 bits (189), Expect = 3e-17
Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 13/136 (9%)
Query: 29 ALAKHEGITRHYKFHIKMQNITRLCQ--TKSIVTVNGQFPGPRIIAREGDRLLIRVINNV 86
+AK + I+ + + + +T NG PGP ++ E D + +R+IN
Sbjct: 23 QVAKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLIN-- 80
Query: 87 KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWL-- 144
+ H + + A G +TQ + G+ F T + G +H +
Sbjct: 81 -PDTNTLLHNIDFHAATGALGGGALTQ--VNPGEETTLRFKAT-KPGVFVYHCAPEGMVP 136
Query: 145 ---RATLYGPIIILPK 157
+ + G I++LP+
Sbjct: 137 WHVTSGMNGAIMVLPR 152
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 76.3 bits (187), Expect = 5e-17
Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 13/134 (9%)
Query: 31 AKHEGITRHYKFHIKMQNITRLCQTKSIV-TVNGQFPGPRIIAREGDRLLIRVINNVKYN 89
A + ++ I + + T +G PGP +I EGD + + +IN +
Sbjct: 24 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPE-- 81
Query: 90 VTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-- 147
H + + A G +T I G+ V F T + G +H
Sbjct: 82 -NTMPHNIDFHAATGALGGGGLT--LINPGEKVVLRFKAT-RAGAFVYHCAPGGPMIPWH 137
Query: 148 ----LYGPIIILPK 157
+ G I++LP+
Sbjct: 138 VVSGMAGCIMVLPR 151
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.5 bits (185), Expect = 2e-16
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 21/105 (20%)
Query: 65 FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVY 124
GP++ A GD++ I N +IH HGV+ S P G++ Y
Sbjct: 83 ILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESSTV---------TPTLPGETLTY 133
Query: 125 NFTVTGQRG---------TLFWHAHISWLRAT---LYGPIIILPK 157
+ + + G +++ + ++ L GP+I+ +
Sbjct: 134 VWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRR 178
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 73.3 bits (179), Expect = 5e-16
Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 7/101 (6%)
Query: 60 TVNGQFPGPRIIAREGDRLLIRVINNVK---YNVTIHWHG--VRQLRSGWADGPAYVTQC 114
V+ + P + G + + IN K ++ I G +
Sbjct: 53 EVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSP 111
Query: 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LYGPIII 154
+ G+ NFT GT ++ I AT +G I++
Sbjct: 112 VPKDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVV 152
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 72.0 bits (176), Expect = 3e-15
Identities = 23/136 (16%), Positives = 43/136 (31%), Gaps = 15/136 (11%)
Query: 408 TTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHG 467
F F++ + V+ ++ HP H+HG
Sbjct: 58 MNHMNHGGKFDFHHANKINGQAF-DMNKPMFAAAKGQYERWVISGVGDMML--HPFHIHG 114
Query: 468 FNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGW-VAIRFLADNP--GVWFMHC 524
F ++++ + ++TV V V ++F D P + HC
Sbjct: 115 TQFRILSENGKPPAAH---------RAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHC 165
Query: 525 HLEVHTSWGLKMAWIV 540
HL H G+ + + V
Sbjct: 166 HLLEHEDTGMMLGFTV 181
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.0 bits (147), Expect = 6e-12
Identities = 10/82 (12%), Positives = 23/82 (28%), Gaps = 17/82 (20%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPG 518
+ H +H HG + + G + + A PG
Sbjct: 74 DIHVVHFHGQTLLENGTQ-----------------QHQLGVWPLLPGSFKTLEMKASKPG 116
Query: 519 VWFMHCHLEVHTSWGLKMAWIV 540
W + + G++ +++
Sbjct: 117 WWLLDTEVGEIQRAGMQTPFLI 138
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 58.3 bits (140), Expect = 5e-11
Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 15/121 (12%)
Query: 47 QNITRLCQTKSIV--------TVNGQ-FPGPRIIAREGDRLLIRVIN--NVKYNVTIHWH 95
+ TR + S +NG + P + E + + + ++N + +H+H
Sbjct: 22 KKPTRSWRRASSEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFH 81
Query: 96 GVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW-LRATLYGPIII 154
G L +G + P+ G + + G + RA + P +I
Sbjct: 82 GQTLLENGT--QQHQLGVWPLLPGSFKTLEMKAS-KPGWWLLDTEVGEIQRAGMQTPFLI 138
Query: 155 L 155
+
Sbjct: 139 V 139
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.6 bits (141), Expect = 5e-11
Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 17/82 (20%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPG 518
+ H +H HG +F + + + G + + PG
Sbjct: 82 DLHTVHFHGHSFQYKHR-----------------GVYSSDVFDIFPGTYQTLEMFPRTPG 124
Query: 519 VWFMHCHLEVHTSWGLKMAWIV 540
+W +HCH+ H G++ + V
Sbjct: 125 IWLLHCHVTDHIHAGMETTYTV 146
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (133), Expect = 7e-10
Identities = 13/102 (12%), Positives = 24/102 (23%), Gaps = 4/102 (3%)
Query: 58 IVTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCP 115
+ +NG+ G + GD + ++ H G
Sbjct: 48 MHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFD 107
Query: 116 IQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LYGPIIILP 156
I G G H H++ + +L
Sbjct: 108 IFPGTYQTLEMFPR-TPGIWLLHCHVTDHIHAGMETTYTVLQ 148
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (135), Expect = 3e-10
Identities = 11/51 (21%), Positives = 19/51 (37%)
Query: 492 VDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542
+T+ + +A NPG W + C H GL+ + V +
Sbjct: 95 NKNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQE 145
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (116), Expect = 1e-07
Identities = 10/100 (10%), Positives = 20/100 (20%), Gaps = 7/100 (7%)
Query: 58 IVTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCP 115
+ +VNG G P + DR+ + H + +
Sbjct: 48 MYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEV---DVHAAFFHGQALTNKNYRIDTIN 104
Query: 116 IQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LYGPIII 154
+ + G L +
Sbjct: 105 LFPATLFDAYMVAQ-NPGEWMLSCQNLNHLKAGLQAFFQV 143
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 56.3 bits (135), Expect = 5e-10
Identities = 21/155 (13%), Positives = 48/155 (30%), Gaps = 22/155 (14%)
Query: 165 PQPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLK 224
P +VP++ + + ++ + +P++ + + G K L+
Sbjct: 3 PSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWPYLE 62
Query: 225 VTPGKTYLLRMINAALNDELFFSIAN-HTLTIVETDAVYAKSKAPNANFLIA-------- 275
V + Y R+INA+ S+ N + +D +F +A
Sbjct: 63 V-EPRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDII 121
Query: 276 ------------ARPYATGPASFDNTTTAGVLEYD 298
A + T A ++++
Sbjct: 122 IDFTAYEGESIILANSAGCGGDVNPETDANIMQFR 156
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.4 bits (130), Expect = 2e-09
Identities = 10/51 (19%), Positives = 19/51 (37%)
Query: 492 VDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542
R+T + + + D G + + C H + G+K + VN
Sbjct: 94 WRGERRDTANLFPQTSLTLHMWPDTEGTFNVECLTTDHYTGGMKQKYTVNQ 144
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (117), Expect = 8e-08
Identities = 11/98 (11%), Positives = 27/98 (27%), Gaps = 7/98 (7%)
Query: 60 TVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQ 117
++NG G P + +GD ++ + + HG+ + + +
Sbjct: 49 SMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEA---DVHGIYFSGNTYLWRGERRDTANLF 105
Query: 118 TGQSYVYNFTVTGQRGTLFWHAHISW-LRATLYGPIII 154
S + GT + + +
Sbjct: 106 PQTSLTLHMW-PDTEGTFNVECLTTDHYTGGMKQKYTV 142
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 50.4 bits (120), Expect = 5e-08
Identities = 28/177 (15%), Positives = 54/177 (30%), Gaps = 25/177 (14%)
Query: 170 EVPIIFGEW-WKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPG 228
+VP+I + + AD + + T D NG P + P
Sbjct: 10 DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAA-----------PR 58
Query: 229 KTYLLRMINAALNDEL-FFSIANHTLTIVETDAVYAKSKAPNANFLIAARPYATGPASFD 287
LR++N L F + N L ++ +D + +
Sbjct: 59 GWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL-------MG--- 108
Query: 288 NTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAK 344
++E + LP+ + + F+ + VM+ + I A+ P
Sbjct: 109 -ERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRI-QPIAISASGALPDT 163
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 48.5 bits (115), Expect = 9e-08
Identities = 10/81 (12%), Positives = 21/81 (25%), Gaps = 21/81 (25%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPG 518
E +H +G + + + + + S G
Sbjct: 57 ELFSIHFNGQVL--------------------EQNHHKISAITLVSATSTTANMTVSPEG 96
Query: 519 VWFMHCHLEVHTSWGLKMAWI 539
W + + H G+ A+I
Sbjct: 97 RWTIASLIPRHFQAGM-QAYI 116
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.4 bits (112), Expect = 2e-07
Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 11/98 (11%)
Query: 60 TVNGQFPG--PRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADGPAYVTQCP 115
TVNG G P I D + +I +IH++G ++
Sbjct: 25 TVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQV-----LEQNHHKISAIT 79
Query: 116 IQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT-LYGPI 152
+ + S N TV+ G + I + I
Sbjct: 80 LVSATSTTANMTVS-PEGRWTIASLIPRHFQAGMQAYI 116
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 173 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 45.6 bits (108), Expect = 2e-06
Identities = 19/101 (18%), Positives = 28/101 (27%), Gaps = 20/101 (19%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERN--TVGVPSGGWVAIRFLADN 516
HL G + V KF +P + + T +P G A +
Sbjct: 85 RDTRPHLIGGHGDYVWAT----------GKFR--NPPDLDQETWLIPGGTAGAAFYTFRQ 132
Query: 517 PGVWFMHCH-LEVHTSWGLKMAWIVNDGKGP----KQKLPP 552
PGV+ H L G G+ + P
Sbjct: 133 PGVYAYVNHNLIEAFELGA-AGHFKVTGEWNDDLMTSVVKP 172
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 67 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.7 bits (95), Expect = 2e-05
Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 12/60 (20%)
Query: 115 PIQTGQSYVYNFTVTGQRG---------TLFWHAHISWLRAT---LYGPIIILPKQQASY 162
IQ ++Y Y + T + G +++ ++ + L GP++I K
Sbjct: 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDK 61
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 132 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Score = 39.7 bits (92), Expect = 2e-04
Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 9/100 (9%)
Query: 58 IVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQ 117
+ +V F +EGD + + V N + + H + GP +
Sbjct: 42 MSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVAMEIGPQMTSSVTFV 101
Query: 118 TGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIIILPK 157
VY + F HA + G +++ PK
Sbjct: 102 AANPGVYWY-----YCQWFCHALHME----MRGRMLVEPK 132
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 39.0 bits (90), Expect = 4e-04
Identities = 21/127 (16%), Positives = 35/127 (27%), Gaps = 27/127 (21%)
Query: 419 FNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFG 478
TG + +G V + N H+ G F V G
Sbjct: 45 GALTGDNA--LKAKAGETVRMYVGNGGPN-----------LVSSFHVIGEIFDKVYVEGG 91
Query: 479 NFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCH-LEVHTSWGLKMA 537
+ VP+GG + F D PG + + H + + G +
Sbjct: 92 KL------------INENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGA-LG 138
Query: 538 WIVNDGK 544
+ +G
Sbjct: 139 QLKVEGA 145
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 38.3 bits (89), Expect = 8e-04
Identities = 22/102 (21%), Positives = 32/102 (31%), Gaps = 18/102 (17%)
Query: 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERN--TVGVPSGGWVAIRFLADN 516
HL G + V + G F +P +R+ T + G A +
Sbjct: 85 RDTRPHLIGGHGDWVWET-GKF-----------ANPPQRDLETWFIRGGSAGAALYTFKQ 132
Query: 517 PGVWFMHCHLEVHTSWGLKMAWIVNDGKG----PKQKLPPPP 554
PGV+ H + I +GK KQ P P
Sbjct: 133 PGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAP 174
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Score = 36.4 bits (83), Expect = 0.002
Identities = 17/115 (14%), Positives = 34/115 (29%), Gaps = 8/115 (6%)
Query: 426 PSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKD 485
+++ + + T V + N + V + L G + + +
Sbjct: 31 QTSLSLPANTVVRLDFVNQNNLGVQHN--------WVLVNGGDDVAAAVNTAAQNNADAL 82
Query: 486 PAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIV 540
A T + +G ++ F PG + C H G+K V
Sbjct: 83 FVPPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTV 137
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 560 | |||
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 100.0 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 100.0 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 100.0 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.98 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.98 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.97 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.97 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.96 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.96 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.95 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.95 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.94 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.92 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.9 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.88 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.88 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.88 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.87 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.87 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.86 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.85 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.85 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.83 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.81 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.81 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.81 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.71 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.66 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.66 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.64 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.63 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.61 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.6 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 99.57 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 99.54 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.53 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.48 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.46 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.46 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.4 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.33 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.27 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.27 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.2 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.19 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.18 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 99.15 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.04 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 99.03 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 98.97 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.92 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.91 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.9 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.9 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.81 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.71 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.51 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 98.51 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.5 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.48 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.46 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 98.32 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.28 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.27 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 98.24 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.18 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 98.17 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.16 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 98.03 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 98.03 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.02 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.0 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 97.99 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 97.92 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 97.88 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 97.87 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 97.86 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 97.86 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 97.81 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 97.77 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 97.74 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 97.7 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 97.69 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 97.69 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 97.67 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.66 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 97.6 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.58 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 97.56 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.54 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 97.53 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 97.49 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 97.4 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 97.4 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 97.39 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 97.35 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 97.29 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.19 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 97.11 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 97.09 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.99 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.98 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 96.91 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 96.9 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 96.6 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 96.49 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 96.47 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 96.39 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 96.32 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 96.1 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 96.08 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 96.07 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 96.02 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 95.81 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 95.67 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 95.59 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 95.56 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 95.43 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 95.39 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 94.87 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 93.66 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 92.71 | |
| d1cyxa_ | 158 | Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 | 87.0 |
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=100.00 E-value=8.5e-40 Score=283.09 Aligned_cols=125 Identities=35% Similarity=0.594 Sum_probs=117.6
Q ss_pred ceEEEEEEEEEEEeeecCc-eeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-----cCeeEEecCcccCCCcCCCCCC
Q 008592 36 ITRHYKFHIKMQNITRLCQ-TKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-----YNVTIHWHGVRQLRSGWADGPA 109 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~~g~-~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~DGv~ 109 (560)
++++|+|++++..+++||. .+.+++|||++|||+|++++||+|+|+|+|+++ ++|+|||||+++.+..++||++
T Consensus 1 a~v~~~l~~~~~~~~pdG~~~~~~~~~nG~~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~ 80 (136)
T d1v10a1 1 ATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA 80 (136)
T ss_dssp CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCB
T ss_pred CEEEEEEEEEEEEECCCCcceeEEEEECCCccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCC
Confidence 3688999999999999995 778999999999999999999999999999976 7899999999999999999999
Q ss_pred CcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCC
Q 008592 110 YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA 160 (560)
Q Consensus 110 ~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~ 160 (560)
+++||+|.||++|+|+|++++++||||||||.+.|. +||+|+|||+++++.
T Consensus 81 ~~t~~~I~PG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~dp 132 (136)
T d1v10a1 81 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDP 132 (136)
T ss_dssp TTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCT
T ss_pred ccccceECCCCeEEEEEECCCCccceEEecCchhHHhCCCEEEEEECCCccc
Confidence 999999999999999999977899999999999988 899999999987653
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=5e-38 Score=293.95 Aligned_cols=193 Identities=34% Similarity=0.625 Sum_probs=148.8
Q ss_pred CCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCC--C
Q 008592 346 PMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYT--G 423 (560)
Q Consensus 346 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~--~ 423 (560)
|.+.++++.+....... +| ...|++|+++|..|++++|.+.+.+.. +.+..++ ++..|..+ .
T Consensus 2 P~~~~~ti~l~~~~~~~-----------ng-~~~~~iNniSf~~P~~P~l~~~~~~~~-~~~~~~~---~~~~~~~~~~~ 65 (214)
T d1aoza3 2 PVKFNRRIFLLNTQNVI-----------NG-YVKWAINDVSLALPPTPYLGAMKYNLL-HAFDQNP---PPEVFPEDYDI 65 (214)
T ss_dssp CSSCSEEEEEEEEEEEE-----------TT-EEEEEETTEEECCCSSCHHHHHHTTCT-TSSCCSC---CCSCCCTTCCT
T ss_pred CCCCCeEEEEecCcccc-----------CC-eEEEEECCEeccCCCcchHHHHhhccc-cccccCC---Ccccccccccc
Confidence 34567888775433221 33 457999999999999999888776543 3333332 23333222 1
Q ss_pred -CCCCCccccCCcEEEEecCCCEEEEEEeeCCcC---ccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccce
Q 008592 424 -TPPSNIMVSSGTKVVVLPFNASVEVVMQDTSII---VAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNT 499 (560)
Q Consensus 424 -~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~---~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDT 499 (560)
..+.+...+.++.++.++.|++|||+|+|.+.+ ....||||||||+||||+++.|.++... ...+++.+|.||||
T Consensus 66 ~~~~~~~~~~~~t~v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~-~~~~n~~~p~~rDT 144 (214)
T d1aoza3 66 DTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE-ESSLNLKNPPLRNT 144 (214)
T ss_dssp TSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGG-GGGSCCSSCCEESE
T ss_pred cCCCCCcccccCceeEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccc-cccccccCCceecC
Confidence 123344567788899999999999999997642 2457999999999999999999887543 45688999999999
Q ss_pred eEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCCCCCCCCCCCCC
Q 008592 500 VGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPPSDLPKC 560 (560)
Q Consensus 500 v~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c 560 (560)
+.|++++|++|||++||||.|+||||+++|++.|||++|.|.+. +..++|.++++|
T Consensus 145 v~v~~g~~~~ir~~adnpG~w~~HCH~~~H~~~GM~~~~~v~~~-----~~~~~P~~~~~c 200 (214)
T d1aoza3 145 VVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALAC 200 (214)
T ss_dssp EEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSS
T ss_pred cccCCCceEEEEEecCCCeeEEEEECcHHHHhCcCcEEEEEccc-----cccCCCcccccc
Confidence 99999999999999999999999999999999999999988542 455678889988
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=2.2e-37 Score=267.65 Aligned_cols=125 Identities=41% Similarity=0.834 Sum_probs=118.7
Q ss_pred CceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCCcCc
Q 008592 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAYVTQ 113 (560)
Q Consensus 35 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 113 (560)
+++|+|+|++++..+++||.++.+|+|||++|||+|++++||+|+|+|+|+|+ +++++||||+++...+++||+++++|
T Consensus 1 ~~~~~~~~~v~~~~~~pdg~~~~~~~~NG~~PGP~i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~~~~~~~~~~~~~~ 80 (129)
T d1aoza1 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (129)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CcEEEEEEEEEEEEECCCCeEEEEEEECCCcCCCeEEEECCcEEEEEEEeCCCCCCeeeeeccceeeccCcccccccccc
Confidence 47899999999999999999999999999999999999999999999999985 79999999999999999999999999
Q ss_pred cccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCC
Q 008592 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA 160 (560)
Q Consensus 114 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~ 160 (560)
|+|+||++++|+|++ +++||||||||...+. +||+|+|||++++++
T Consensus 81 ~~I~PG~s~~y~f~a-~~~Gt~~YH~H~~~h~~~Gm~G~~iV~~~~~~ 127 (129)
T d1aoza1 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGK 127 (129)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTC
T ss_pred ceECCCCEEEEEEEC-CCCCceEEecCCHHHHhCCCEEEEEEcCCCCC
Confidence 999999999999998 7899999999998876 899999999998753
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=2.8e-37 Score=265.75 Aligned_cols=121 Identities=32% Similarity=0.636 Sum_probs=113.7
Q ss_pred EEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-----cCeeEEecCcccCCCcCCCCCCCcC
Q 008592 38 RHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-----YNVTIHWHGVRQLRSGWADGPAYVT 112 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~t 112 (560)
..++|+++.+.+++||+++.+++||| +|||+|++++||+|+|+|+|+++ ++++|||||+++....++||+++++
T Consensus 5 ~~~tlti~~~~i~pdG~~~~~~~~nG-~pGP~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~g~~ 83 (131)
T d1hfua1 5 SVDTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (131)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETT-BSSCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ccEEEEEEeEEEcCCCeEeeEEEECC-cCCCeEEEECCCEEEEEEEECCCCccccccceEEeCCcccCCCCCCCCCcccc
Confidence 46899999999999999999999999 79999999999999999999996 4689999999999999999999999
Q ss_pred ccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCC
Q 008592 113 QCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 113 q~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 159 (560)
||+|.||++|+|+|++++++||||||||...|. +||+|+|||+++++
T Consensus 84 ~~~I~PG~~~~y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~D 131 (131)
T d1hfua1 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND 131 (131)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred cceECCCCeEEEEEeCCCCcceEEEecCCHHHHhCCCEEEEEEcCCCC
Confidence 999999999999999778999999999998887 89999999998753
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=5.1e-37 Score=264.28 Aligned_cols=120 Identities=35% Similarity=0.747 Sum_probs=114.3
Q ss_pred EEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-----cCeeEEecCcccCCCcCCCCCCCcCc
Q 008592 39 HYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-----YNVTIHWHGVRQLRSGWADGPAYVTQ 113 (560)
Q Consensus 39 ~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~tq 113 (560)
+|+|++++..+++||..+.+|+|||++|||+|++++||+|+|+|+|+++ +++++||||+++.+.+|+||+++++|
T Consensus 5 ~~~l~v~~~~i~p~G~~~~~~~~ng~~PGPtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~~~~~~d~~~~~s~ 84 (130)
T d1gyca1 5 AASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQ 84 (130)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCEEEEEEEECCcccCCeEEEECCeEEEEEEEecCCCcccCCceeEEeccccccccCCCCCcccccc
Confidence 6899999999999999999999999999999999999999999999975 67899999999999999999999999
Q ss_pred cccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCC
Q 008592 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQ 158 (560)
Q Consensus 114 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~ 158 (560)
|+|.||++|+|+|++++++||||||||...|. +||+|+|||++++
T Consensus 85 ~~i~PG~s~~Y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~p~ 130 (130)
T d1gyca1 85 CPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130 (130)
T ss_dssp CCBCTTEEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCCCCCCeEEEEEECCCCCceeEEecCCHHHHhCCCEEEEEEeCCC
Confidence 99999999999999877899999999998886 8999999999863
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.3e-34 Score=248.91 Aligned_cols=120 Identities=22% Similarity=0.319 Sum_probs=109.0
Q ss_pred CceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCcc
Q 008592 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQC 114 (560)
Q Consensus 35 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 114 (560)
...++|+|++++.....+|..+.+|+|||++|||+|++++||+|+|+|+|+++++++|||||+++... +||++ |+
T Consensus 13 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~---~~ 87 (140)
T d1kv7a1 13 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QG 87 (140)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCGG--GSCCT---TC
T ss_pred CCceEEEEEEEEEEEecCCEEEEEEEECCccCCceEEEECCCEEEEEEEeCccccccEeeeeeecCCc--cCCCc---cc
Confidence 34578999999999999999999999999999999999999999999999999999999999998754 99985 68
Q ss_pred ccCCCCeEEEEEEEcccCcceeEeeccccc----c-ccceEeEEEeCCCC
Q 008592 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISWL----R-ATLYGPIIILPKQQ 159 (560)
Q Consensus 115 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~~~ 159 (560)
+|.||++++|+|++++++||||||||.++. . +||+|+|||+++++
T Consensus 88 ~i~pg~~~~y~~~~~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~~~e~ 137 (140)
T d1kv7a1 88 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEI 137 (140)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHH
T ss_pred eEccCCceeEEEEEecCCeeEEEEECCCCChHHHHhCCCeEEEEECCccc
Confidence 999999999999986678999999998753 2 79999999998653
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=100.00 E-value=2e-33 Score=251.96 Aligned_cols=126 Identities=32% Similarity=0.568 Sum_probs=114.6
Q ss_pred ccCceEEEEEEEEEEE--eeecCc-eeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCC
Q 008592 33 HEGITRHYKFHIKMQN--ITRLCQ-TKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGP 108 (560)
Q Consensus 33 ~~~~~~~~~l~~~~~~--~~~~g~-~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv 108 (560)
..|.+|+|+|++++.. +++||. .+.+|+|||++|||+|++++||+|+|+|+|+++ ..++|||||+++...+++||+
T Consensus 29 ~tg~~~~y~l~~~~~~~~~~pdG~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~ 108 (162)
T d2q9oa1 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGA 108 (162)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEEEeeECCCCCcceeEEEECCcccCCeEEEECCcEEEEEEEecCcccccccccccccccCCCcCCCC
Confidence 4688999999999765 568885 456999999999999999999999999999985 789999999999999999999
Q ss_pred CCcCccccC-CCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCC
Q 008592 109 AYVTQCPIQ-TGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 109 ~~~tq~~i~-pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 159 (560)
++++||+|. ||++++|+|.+ +++||||||||.+.|+ +||+|+|||++++.
T Consensus 109 ~~~~~~~i~~pg~~~~y~f~~-~~~Gt~wYH~H~~~q~~~Gl~G~~iV~~p~~ 160 (162)
T d2q9oa1 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS 160 (162)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS
T ss_pred cccccceecCCCCEEEeeecC-CCCEEEEeecCCHHHHhCCCEEEEEECCCCC
Confidence 999999984 58999999997 8899999999999987 89999999998764
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=7e-34 Score=263.65 Aligned_cols=132 Identities=33% Similarity=0.585 Sum_probs=107.1
Q ss_pred eeeecceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCcc
Q 008592 379 AASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVA 458 (560)
Q Consensus 379 ~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~ 458 (560)
.|+||+++|..++.+.|.....+.. .. .....+..++.++.|++++|++.|.. ..
T Consensus 36 ~wtINg~s~~~~~~p~l~~~~~~~~---~~--------------------~~~~~~~~v~~~~~~~~~~~v~~~~~--~~ 90 (200)
T d1hfua3 36 RFTINGTAYESPSVPTLLQIMSGAQ---SA--------------------NDLLPAGSVYELPRNQVVELVVPAGV--LG 90 (200)
T ss_dssp EEEETTBCCCCCSSCHHHHHHTTCC---SG--------------------GGSSSTTSEEEECSSCEEEEEEECCS--TT
T ss_pred EEEECCEeccCCCCChhhhhhcCCc---Cc--------------------ccccccCceEEecCCcceEEEEeecc--cc
Confidence 5899999999888776665543311 00 01233567899999999999998864 35
Q ss_pred CCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeC-CCCEEEEEEEecCceeeEEEeechhhhhcccEEE
Q 008592 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVP-SGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMA 537 (560)
Q Consensus 459 ~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp-p~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~ 537 (560)
+.||||||||+||||+++.+ ..+++.+|.||||+.|+ +|+|++|||++||||.|+|||||++|++.|||++
T Consensus 91 ~~Hp~HlHg~~F~vl~~~g~--------~~~~~~~~~~rDtv~v~~~G~~~~ir~~adnpG~w~~HCHi~~H~~~GM~~~ 162 (200)
T d1hfua3 91 GPHPFHLHGHAFSVVRSAGS--------STYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIV 162 (200)
T ss_dssp CCCEEEETTCCEEEEECTTC--------CCCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEE
T ss_pred ccCceeecCCcEEEEeccCC--------CCCccccCcccceEEeCCCCEEEEEEEECCCCeeeEEEeCCChHHhCCCcEE
Confidence 78999999999999998743 24567899999999997 4679999999999999999999999999999999
Q ss_pred EEEcCC
Q 008592 538 WIVNDG 543 (560)
Q Consensus 538 ~~V~~~ 543 (560)
|.|.++
T Consensus 163 ~~~~~~ 168 (200)
T d1hfua3 163 FAEDMA 168 (200)
T ss_dssp EEECHH
T ss_pred EEEcCC
Confidence 987654
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.98 E-value=3.7e-33 Score=258.10 Aligned_cols=148 Identities=33% Similarity=0.614 Sum_probs=114.2
Q ss_pred CCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCCCC
Q 008592 346 PMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTP 425 (560)
Q Consensus 346 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 425 (560)
+..++..+.+.++. ++..+.|++|+++|..++.+.|...+.+.. . +.
T Consensus 19 ~~~~d~~~~~~~~~--------------~~~~~~~~iNg~~f~~~~~p~l~~~~~g~~----~-------~~-------- 65 (190)
T d1v10a3 19 PGGADINLNLRIGR--------------NATTADFTINGAPFIPPTVPVLLQILSGVT----N-------PN-------- 65 (190)
T ss_dssp TTCSSEEEECCEEC--------------CSSSSCCEESSCCCCCCSSCHHHHHHHTCC----C-------GG--------
T ss_pred CCCCCEEEEEEEEe--------------cCCEeEEEECCEecCCCCCchHHHhhcCCc----c-------cc--------
Confidence 34567666555543 233456999999999888887766554321 0 00
Q ss_pred CCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCC
Q 008592 426 PSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSG 505 (560)
Q Consensus 426 ~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~ 505 (560)
.....+.++.+..++++++++.|. ..||||||||+|+||+++.+ ..+++.+|.||||+.|+++
T Consensus 66 ----~~~~~~~~~~~~~~~~~~i~~~~~-----~~HP~HlHG~~F~Vl~~~~~--------~~~~~~~~~~rDTv~v~~~ 128 (190)
T d1v10a3 66 ----DLLPGGAVISLPANQVIEISIPGG-----GNHPFHLHGHNFDVVRTPGS--------SVYNYVNPVRRDVVSIGGG 128 (190)
T ss_dssp ----GSSSTTTEEEECTTCEEEEEEECC-----BSCEEEESSCCEEEEECTTC--------SCCCCSSCCEESEEECCBS
T ss_pred ----cccccceeEEccCccEEEEEeccC-----ccccccccCceEEEEEcCCC--------cccccccCcccCEEEeCCC
Confidence 011235578889999999988873 68999999999999998633 2456789999999999987
Q ss_pred C-EEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 506 G-WVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 506 g-~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
| +++|||++||||.|+|||||++|++.|||++|.+.++
T Consensus 129 g~~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~ 167 (190)
T d1v10a3 129 GDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIP 167 (190)
T ss_dssp SCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGG
T ss_pred eEEEEEEEEcCCCeeEEEecCchhhhhCCCcEEEEECCC
Confidence 6 7889999999999999999999999999999987554
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.98 E-value=6.3e-33 Score=257.20 Aligned_cols=144 Identities=31% Similarity=0.562 Sum_probs=112.5
Q ss_pred eeeecceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCcc
Q 008592 379 AASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVA 458 (560)
Q Consensus 379 ~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~ 458 (560)
.|++|+++|..|+.+.+........ .. ...+.+..++.++.++++++++.|....+.
T Consensus 36 ~~~iNg~sf~~p~~p~l~~~~~~~~---~~--------------------~~~~~~~~v~~~~~~~~~eiv~~~~~~~~~ 92 (199)
T d1gyca3 36 NFFINNASFTPPTVPVLLQILSGAQ---TA--------------------QDLLPAGSVYPLPAHSTIEITLPATALAPG 92 (199)
T ss_dssp CEEETTBCCCCCSSCHHHHHHTTCC---ST--------------------TTSSSTTSEEEECTTCEEEEEEECCTTSCS
T ss_pred eEEECCEecCCCCcchHHHHhcCCC---Cc--------------------ccccccCceEEeccCceeEEEeecccccCC
Confidence 4899999999988776665443211 00 012345667899999999999998765556
Q ss_pred CCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEe---CCCCEEEEEEEecCceeeEEEeechhhhhcccE
Q 008592 459 ESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGV---PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLK 535 (560)
Q Consensus 459 ~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~v---pp~g~v~irf~adnpG~w~~HCHil~H~d~GMm 535 (560)
..||||||||+|+|++++.+ ..+++.+|.+|||+.+ ++++|++|||++||||.|+|||||++|++.|||
T Consensus 93 ~~HP~HlHG~~F~vv~~~~~--------~~~~~~~p~~rdt~~~~~~~~g~~~~irf~adnpG~w~~HCHi~~H~~~GM~ 164 (199)
T d1gyca3 93 APHPFHLHGHAFAVVRSAGS--------TTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFA 164 (199)
T ss_dssp CSCEEEETTCCEEEEECTTC--------CCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCE
T ss_pred CceeeeecCCcEEEEeecCC--------CccCccCcccccceeeeccCCCcEEEEEEECCCCeeEEEEcCchhhHhccCc
Confidence 78999999999999998754 2456789999999877 799999999999999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCCCC
Q 008592 536 MAWIVNDGKGPKQKLPPPPS 555 (560)
Q Consensus 536 ~~~~V~~~~~~~~~~~~~p~ 555 (560)
++|.+.+++ .+.+.++|.
T Consensus 165 ~~~~~~~~~--~~~~~~~p~ 182 (199)
T d1gyca3 165 IVFAEDVAD--VKAANPVPK 182 (199)
T ss_dssp EEEEETHHH--HHHHCCCCH
T ss_pred EEEEEcCCc--ccccCCCCH
Confidence 999765432 334444444
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.97 E-value=5e-31 Score=234.36 Aligned_cols=101 Identities=16% Similarity=0.240 Sum_probs=84.3
Q ss_pred EecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCC---------CCCCCCCCCCCCCccceeEeCCCCEEE
Q 008592 439 VLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDP---------NKDPAKFNLVDPAERNTVGVPSGGWVA 509 (560)
Q Consensus 439 ~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~---------~~~~~~~~~~~p~~rDTv~vpp~g~v~ 509 (560)
.++.|++++|.|.|.+ .+.|||||||++||||+++.+.+.. ........+.++.||||+.|+|+++++
T Consensus 44 ~~~~G~~e~W~i~N~~---~~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~ 120 (154)
T d1gska3 44 TPKVGTTEIWSIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLR 120 (154)
T ss_dssp CCBTTCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEE
T ss_pred ccCCCCEEEEEEEeCC---CCCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCCCEEE
Confidence 4578999999999964 5899999999999999987543211 111233456678899999999999999
Q ss_pred EEEE-ecCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 510 IRFL-ADNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 510 irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
|||+ +||||.|+|||||++|||.|||+.|+|.+
T Consensus 121 i~~~~~d~pG~w~~HCHil~Hed~GMM~~~~V~e 154 (154)
T d1gska3 121 IAATFGPYSGRYVWHCHILEHEDYDMMRPMDITD 154 (154)
T ss_dssp EEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred EEEEeCCCCcceEEecCcchHhhCcCceEEEEeC
Confidence 9998 69999999999999999999999999964
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.97 E-value=9.5e-31 Score=233.17 Aligned_cols=123 Identities=19% Similarity=0.332 Sum_probs=103.1
Q ss_pred hccCceEEEEEEEEEEEeeec--CceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNITRL--CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA 109 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~~--g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~ 109 (560)
+....+++|+|++++..+..+ |..+.+|+|||++|||+|++++||+|+|+|+|.++ ++||||++..+. ++++.
T Consensus 27 ~~g~~~~~~~lt~~~~~~~~~~~g~~~~~~t~NG~~PGPtI~v~~Gd~v~v~~~N~~~---~~h~h~ih~hg~--~~~~~ 101 (159)
T d1oe2a1 27 KSGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVEFHGA--TGALG 101 (159)
T ss_dssp CCCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTS--CSGGG
T ss_pred CCCCeEEEEEEEEEEEEEEECCCCcEEEEEEECCcCCCCeEEEECCcEEEEEEECCCc---cccccceeeccc--cCCCC
Confidence 344567999999999988876 78888999999999999999999999999999985 344444444433 56667
Q ss_pred CcCccccCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCC
Q 008592 110 YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQA 160 (560)
Q Consensus 110 ~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~ 160 (560)
+.++++|.||++++|+|++ +++||||||||.++ |. +||+|+|||++++..
T Consensus 102 g~~~~~I~PG~t~ty~f~a-~~~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p~e~~ 156 (159)
T d1oe2a1 102 GAKLTNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGL 156 (159)
T ss_dssp GGGGCCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCC
T ss_pred CcccccCCCCCeEEEEEEc-CCCceEEEEeCCCCCchhHHhCCCEEEEEEECCCCC
Confidence 7788999999999999998 78999999999765 33 899999999987653
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=5.7e-30 Score=240.29 Aligned_cols=140 Identities=24% Similarity=0.477 Sum_probs=101.9
Q ss_pred eeeeeecceeccC-CchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCC-CEEEEEEeeCC
Q 008592 377 KLAASVNNVSFVQ-PNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFN-ASVEVVMQDTS 454 (560)
Q Consensus 377 ~~~~~in~~~~~~-p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~ve~~i~N~~ 454 (560)
.+.|.+|+++|.. +..+.|...+.+-. .+ .....+..+..+ ++..+++++..
T Consensus 27 ~~~w~iNg~s~~~d~~~P~L~~~~~~~~------~~--------------------~~~~~~~~~~~~~~~~~~~i~~~~ 80 (216)
T d2q9oa3 27 LFVWKVNGSDINVDWGKPIIDYILTGNT------SY--------------------PVSDNIVQVDAVDQWTYWLIENDP 80 (216)
T ss_dssp SCEEEETTBCCCCCTTSCHHHHHHHTCC------CC--------------------CGGGCEEEECCSSCEEEEEEEECT
T ss_pred EEEEEECCEecccCCCCCChhhhhcCCc------cc--------------------ccccceeeccccccceeEEEEecc
Confidence 4689999999854 34555554433210 00 011233445543 44445555432
Q ss_pred c-CccCCCceeecCcceEEEEeCCCCCCCCCC---------CCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEe
Q 008592 455 I-IVAESHPLHLHGFNFFVVAQGFGNFDPNKD---------PAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHC 524 (560)
Q Consensus 455 ~-~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~---------~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HC 524 (560)
. .....||||||||+||||+++.+.+..... ...+++.+|.|||||.|+++||++|||++||||.|+|||
T Consensus 81 ~n~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~ir~~adnpG~Wl~HC 160 (216)
T d2q9oa3 81 EGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHC 160 (216)
T ss_dssp TSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEE
T ss_pred CCccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCCEEEEEEECCCCeEEEEEc
Confidence 1 235789999999999999999887665432 235789999999999999999999999999999999999
Q ss_pred echhhhhcccEEEEEEcC
Q 008592 525 HLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 525 Hil~H~d~GMm~~~~V~~ 542 (560)
||++|++.|||++|.+.+
T Consensus 161 Hi~~H~~~GM~~~~~~~p 178 (216)
T d2q9oa3 161 HIAWHVSGGLSVDFLERP 178 (216)
T ss_dssp CCHHHHHTTCEEEEEECH
T ss_pred cCCcccccCCeEEEEEcc
Confidence 999999999999995543
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.96 E-value=6.9e-30 Score=227.29 Aligned_cols=122 Identities=19% Similarity=0.340 Sum_probs=105.4
Q ss_pred hccCceEEEEEEEEEEEee--ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNIT--RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA 109 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~ 109 (560)
.....+++|+|++++..+. .+|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||++..+. +|+.+
T Consensus 26 ~~~~~~~~~~l~~~~~~~~i~~~G~~~~~~~~NG~~PGP~I~v~~GD~V~i~l~N~---~~~~~~Hg~~~h~~--~~~~~ 100 (157)
T d2bw4a1 26 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINP---DTNTLLHNIDFHAA--TGALG 100 (157)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTS--CSGGG
T ss_pred CCCCeEEEEEEEEEEEEEEECCCCeEEEEEEECCccCCceEEEECCcEEEEEEEeC---CCCcceEeeeeccc--CCCcC
Confidence 3445679999999987776 46899999999999999999999999999999996 45789999988876 66666
Q ss_pred CcCccccCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCC
Q 008592 110 YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 110 ~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~ 159 (560)
+.++++|.||++++|+|++ +++||||||||.++ +. +||+|+|||++++.
T Consensus 101 ~~~~~~i~PGet~ty~f~a-~~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~p~e~ 154 (157)
T d2bw4a1 101 GGALTQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDG 154 (157)
T ss_dssp GGGGCCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBC
T ss_pred CcceeeECcCCEEeEEEEC-CCCccceEEECCCCchHHHHhCCCEEEEEEeCCCC
Confidence 6777889999999999998 78999999999765 33 89999999998753
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=6.8e-30 Score=233.65 Aligned_cols=127 Identities=21% Similarity=0.312 Sum_probs=106.8
Q ss_pred hccCceEEEEEEEEEEEee--ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCc---------------------
Q 008592 32 KHEGITRHYKFHIKMQNIT--RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKY--------------------- 88 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~--------------------- 88 (560)
+..+..+.|+|++++...+ +++..+.+|+|||++|||+|++++||+|+|+++|+|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ynG~~PGPtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~ 98 (181)
T d1gska1 19 QQSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPE 98 (181)
T ss_dssp EECSSCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCS
T ss_pred ccCCCceEEEEEEEEeEEEecCCCcceeEEEECCccCCCeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCC
Confidence 4566778899999987755 68888999999999999999999999999999999953
Q ss_pred -CeeEEecCcccCCCcCCCCCCC--cCcccc---CCCCeEEEEEEEcccCcceeEeeccccc----c-ccceEeEEEeCC
Q 008592 89 -NVTIHWHGVRQLRSGWADGPAY--VTQCPI---QTGQSYVYNFTVTGQRGTLFWHAHISWL----R-ATLYGPIIILPK 157 (560)
Q Consensus 89 -~~~iH~HG~~~~~~~~~DGv~~--~tq~~i---~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~ 157 (560)
+++|||||+++.+. +||.+. ++++.+ .+|++++|+|++.+++||||||||.++. . +||+|+|||+++
T Consensus 99 ~~t~iH~HG~~~~~~--~DG~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~ 176 (181)
T d1gska1 99 VKTVVHLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDP 176 (181)
T ss_dssp CCBCEEEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECG
T ss_pred CcceeeeeccccCCc--cCCCcccccccCcccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCc
Confidence 58999999998865 899874 555544 5557789999986778999999998763 2 799999999987
Q ss_pred CCC
Q 008592 158 QQA 160 (560)
Q Consensus 158 ~~~ 160 (560)
+++
T Consensus 177 ~~~ 179 (181)
T d1gska1 177 KEK 179 (181)
T ss_dssp GGG
T ss_pred ccc
Confidence 653
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.95 E-value=1.3e-28 Score=218.30 Aligned_cols=120 Identities=22% Similarity=0.336 Sum_probs=98.2
Q ss_pred ccCceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 33 HEGITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 33 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
....+++|+|++++..+.. +|..+.+|+|||++|||+|++++||+|+|+|+|.+. .+..||||+|... ..||..
T Consensus 26 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~t~NG~~PGPti~v~~Gd~v~i~~~N~~~-~~~~H~~~~h~~~--~~~~~~-- 100 (153)
T d1mzya1 26 SGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPE-NTMPHNIDFHAAT--GALGGG-- 100 (153)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECTT-CCSCBCCEETTSC--SGGGGG--
T ss_pred CCCeEEEEEEEEEEEEEEeCCCcEEEEEEECCCcCCCcEEEeCCCEEEEEEEcCCC-CceEccCccccCC--cCCCCC--
Confidence 3445789999999999985 678889999999999999999999999999999854 3445555555432 245544
Q ss_pred CccccCCCCeEEEEEEEcccCcceeEeecccc-----cc-ccceEeEEEeCCC
Q 008592 112 TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW-----LR-ATLYGPIIILPKQ 158 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~-----~~-~Gl~G~liV~~~~ 158 (560)
.+.+|.||++++|+|++ +++||||||||.+. +. +||+|+|||++++
T Consensus 101 ~~~~i~PG~t~ty~f~a-~~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 101 GLTLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp GGCCBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred ccccccCCCEEEEEEEc-CCCceEEEEeCCcccccHhHHhCCCEEEEEEecCC
Confidence 34689999999999998 89999999999754 32 7999999999875
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.95 E-value=8.1e-28 Score=213.09 Aligned_cols=122 Identities=20% Similarity=0.249 Sum_probs=101.3
Q ss_pred hccCceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY 110 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 110 (560)
+....+..++|++.+..+.. +|..+.+|+|||++|||+|++++||+|+|+|+|++ .++||||+++....+.|| +
T Consensus 21 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~~---~~~~~H~~~~h~~~~~~~--~ 95 (151)
T d1kbva1 21 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNP---SSTVPHNVDFHAATGQGG--G 95 (151)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECT---TCSSCBCCEETTCCSGGG--G
T ss_pred CCCCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEcCC---CCceeeeccccccccCCC--C
Confidence 34556678999998887774 68999999999999999999999999999999974 346777777666544555 4
Q ss_pred cCccccCCCCeEEEEEEEcccCcceeEeecccc---cc-ccceEeEEEeCCCC
Q 008592 111 VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW---LR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 111 ~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~ 159 (560)
.+++.|.||++++|+|++ +++||||||||.+. |. +||+|+|||++++.
T Consensus 96 ~~~~~i~PG~t~~y~f~a-~~~Gt~~YH~H~~~~~~h~~~Gm~G~liV~p~~~ 147 (151)
T d1kbva1 96 AAATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG 147 (151)
T ss_dssp TTTTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC
T ss_pred cceeeeCCCCEEEEEEeC-CCCeEEEEECCCCChHHHHhCCCEEEEEEECCCC
Confidence 577889999999999998 78999999999654 33 89999999987753
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.3e-27 Score=216.12 Aligned_cols=92 Identities=21% Similarity=0.299 Sum_probs=77.8
Q ss_pred EEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCE-EEEEEEe--
Q 008592 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGW-VAIRFLA-- 514 (560)
Q Consensus 438 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~-v~irf~a-- 514 (560)
+.++.|++|+|+|.|.+. .+.|||||||++|+|++++.+. ....++.|||||.|+++++ ++|+|.+
T Consensus 87 ~~~~~G~~erw~i~N~~~--~~~HP~HlHG~~F~Vl~~~g~~---------~~~~~~~~kDTv~v~~~~~~v~v~f~~~~ 155 (181)
T d1kv7a3 87 FAAAKGQYERWVISGVGD--MMLHPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVEGNVSEVLVKFNHDA 155 (181)
T ss_dssp EECCSSSCEEEEEECTTC--CCCEEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEESSSEEEEEECCCSCC
T ss_pred eEeCCCCEEEEEEEeCCC--CCccCceEeceEEEEEecccCC---------ccccCCcceeEEEeCCCceEEEEEEEeeC
Confidence 788999999999999652 3689999999999999986442 2345678999999998764 6778876
Q ss_pred cCceeeEEEeechhhhhcccEEEEEE
Q 008592 515 DNPGVWFMHCHLEVHTSWGLKMAWIV 540 (560)
Q Consensus 515 dnpG~w~~HCHil~H~d~GMm~~~~V 540 (560)
+++|.|+||||||+|+|.|||+.|+|
T Consensus 156 ~~~G~w~fHCHil~H~d~GMm~~f~V 181 (181)
T d1kv7a3 156 PKEHAYMAHCHLLEHEDTGMMLGFTV 181 (181)
T ss_dssp CGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CCCCeEEEeCChHHHHhCCCCEEEEC
Confidence 45699999999999999999999986
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=2.1e-25 Score=201.68 Aligned_cols=125 Identities=17% Similarity=0.302 Sum_probs=99.2
Q ss_pred CceEEEEEEEEEEEeeec--Cc------------eeEEEEECCC------------CCCcEEEEecCCEEEEEEEeCCCc
Q 008592 35 GITRHYKFHIKMQNITRL--CQ------------TKSIVTVNGQ------------FPGPRIIAREGDRLLIRVINNVKY 88 (560)
Q Consensus 35 ~~~~~~~l~~~~~~~~~~--g~------------~~~~~~~ng~------------~pGP~i~~~~Gd~v~v~~~N~l~~ 88 (560)
|++|+|.+.+.+..+... +. +.....|+++ +|||+||+++||+|+|+|+|.++.
T Consensus 1 ~~~r~y~iaa~e~~WdY~P~~~~~~~~~~g~~ykK~~y~eyd~tf~~~~~~~~~~g~~GP~Ira~~GD~i~V~f~N~~~~ 80 (180)
T d1sdda1 1 AKLRQFYVAAQSIRWNYRPESTHLSSKPFETSFKKIVYREYEAYFQKEKPQSRTSGLLGPTLYAEVGDIMKVHFKNKAHK 80 (180)
T ss_dssp CCCCEECCEEEEEEEC--------------CCEEEEEEECCCTTTCCCCCCCSSCCSCCCCEEEETTCEEEEEEEECSSS
T ss_pred CceEEEEEEEEEEeeccCCCcccccCccCCceEEEEEEEEeccceeeccCCCcccCCcCCeEEEECCcEEeeEEEeCCCC
Confidence 578999999988776532 21 1223566766 699999999999999999999999
Q ss_pred CeeEEecCcccCCC----cCCCCCCCcCcc--ccCCCCeEEEEEEEccc---------CcceeEeecccccc---ccceE
Q 008592 89 NVTIHWHGVRQLRS----GWADGPAYVTQC--PIQTGQSYVYNFTVTGQ---------RGTLFWHAHISWLR---ATLYG 150 (560)
Q Consensus 89 ~~~iH~HG~~~~~~----~~~DGv~~~tq~--~i~pG~~~~Y~~~~~~~---------~Gt~wYH~H~~~~~---~Gl~G 150 (560)
+++|||||+.+... .+.||+++.++| +|+||++|+|+|.++++ +||||||||.+... +||+|
T Consensus 81 ~~siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~PGet~tY~w~v~~~~gp~~~d~~~gt~~YHshv~~~~~~~~GL~G 160 (180)
T d1sdda1 81 PLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIG 160 (180)
T ss_dssp CBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCE
T ss_pred CccccccccccccccccccccccCCCCCccccccCCCCEEEEEEEeCCcccCccCCCCCEEEEEecCCCcHHHhhCCceE
Confidence 99999999987643 346666655554 79999999999999643 57999999987643 89999
Q ss_pred eEEEeCCCC
Q 008592 151 PIIILPKQQ 159 (560)
Q Consensus 151 ~liV~~~~~ 159 (560)
+|||+++..
T Consensus 161 ~lIV~~~g~ 169 (180)
T d1sdda1 161 PLLICKKGT 169 (180)
T ss_dssp EEEEECTTC
T ss_pred EEEEccCCC
Confidence 999998754
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.90 E-value=2.4e-23 Score=186.07 Aligned_cols=130 Identities=23% Similarity=0.385 Sum_probs=103.7
Q ss_pred CcceeEEeeeccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEE
Q 008592 168 FEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFS 247 (560)
Q Consensus 168 ~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~ 247 (560)
++|++|+|+||+++...+++.. .+..+..+++++||||.....++.....++++|++|++|||||||+|+...+.|+
T Consensus 5 d~e~vi~lsDW~h~~~~~l~~~---~~~~~~~pd~~liNGkg~~~~~~~~~~~~~~~v~~g~~~rlRlina~~~~~~~~~ 81 (168)
T d1v10a2 5 DASTVITIADWYHSLSTVLFPN---PNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFS 81 (168)
T ss_dssp SGGGEEEEEEECSSCCC----------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEE
T ss_pred CCccEEEEEECCCCCHHHHHhc---cCCCCCCCceeeecCCCCcCCCCcCCCceEEEECCCCEEEEEEEecccCceEEEE
Confidence 5689999999999988877543 3445667899999999864444445678899999999999999999999999999
Q ss_pred EcCCeEEEEEeCCCccCC--------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCC
Q 008592 248 IANHTLTIVETDAVYAKS--------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPN 301 (560)
Q Consensus 248 i~gh~~~via~DG~~v~p--------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 301 (560)
|++|+|+|||+||.+++| ++++++|||++.....+. .+.+....|+|+|++.+
T Consensus 82 id~H~~~Via~DG~~v~P~~~d~i~i~~GqR~dvlv~~~~~~~~y~ira~~~~~~~-~~~~~~~~aiL~Y~g~~ 154 (168)
T d1v10a2 82 IDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAA 154 (168)
T ss_dssp ETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTCC
T ss_pred ECCCeEEEEEeCCeecCceEEeEEEEccCceEEEEEECCCCCCcEEEEEEeccCCC-cCCCCceEEEEEECCCC
Confidence 999999999999999999 467789999998655443 34455678999999863
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=9.2e-24 Score=194.70 Aligned_cols=95 Identities=22% Similarity=0.338 Sum_probs=79.5
Q ss_pred CCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCC----------cCCCCCCCcCccccCCCCeEEEEEEEcccCc-
Q 008592 65 FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRS----------GWADGPAYVTQCPIQTGQSYVYNFTVTGQRG- 133 (560)
Q Consensus 65 ~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~----------~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~G- 133 (560)
++||+|++++||+|+|+|+|.++.+++|||||++.... .+.+|....+||+|+||++|+|+|+++++.|
T Consensus 83 ~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~dg~~~~~~~~~~~~~~~~~~~~V~PGet~tY~w~v~~~~gP 162 (207)
T d2j5wa3 83 ILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGP 162 (207)
T ss_dssp TSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCSBCCBCC-------CCCCSSCBCTTCEEEEEEECCGGGSC
T ss_pred CcCceEEEECCCEEEEEEEECCCCCccccccccccCcccccccccCCCCcccCCcCcccceecCCCEEEEEEEecCCCCC
Confidence 78999999999999999999999999999999986543 1123334568899999999999999976666
Q ss_pred --------ceeEeecccccc---ccceEeEEEeCCCC
Q 008592 134 --------TLFWHAHISWLR---ATLYGPIIILPKQQ 159 (560)
Q Consensus 134 --------t~wYH~H~~~~~---~Gl~G~liV~~~~~ 159 (560)
|||||||.+... +||+|+|||+.+..
T Consensus 163 ~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g~ 199 (207)
T d2j5wa3 163 TNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGS 199 (207)
T ss_dssp CSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTC
T ss_pred ccCCCCceeEEEccCCChhHhhccCceEEEEEccCCC
Confidence 999999998754 79999999998754
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=1.4e-23 Score=185.54 Aligned_cols=90 Identities=18% Similarity=0.444 Sum_probs=79.5
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.+.++.|++|+|.|.|.+. ..+.||||+||+.|++... .+.+|||+.|+||++++++|++
T Consensus 59 ~~~l~v~~Gd~v~~~l~n~g~-~~~~h~~H~HG~~f~~~~~-----------------g~~~~dtv~i~pg~~~~~~~~a 120 (149)
T d2j5wa5 59 LQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHR-----------------GVYSSDVFDIFPGTYQTLEMFP 120 (149)
T ss_dssp CCCCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTT-----------------TCEEESEEEECTTCEEEEEECC
T ss_pred CCCeEEEcCCcEEEEEEecCC-CCCccceEEEeeEeeeecc-----------------CCCCcceEEECCCceEEEEEeC
Confidence 344788999999999999753 3468999999999988533 2568999999999999999999
Q ss_pred cCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 515 DNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 515 dnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
++||.|+||||+++|++.|||+.|.|.+
T Consensus 121 ~~pG~w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 121 RTPGIWLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp CSCEEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred CCCeeEEEEcCCHHHHhccCceEEEEec
Confidence 9999999999999999999999999975
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.88 E-value=4e-22 Score=180.14 Aligned_cols=130 Identities=19% Similarity=0.301 Sum_probs=104.4
Q ss_pred Ccce-eEEeeeccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCC-CceeeEEEccCCEEEEEEEecCCCCeEE
Q 008592 168 FEEV-PIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAA-KDTFKLKVTPGKTYLLRMINAALNDELF 245 (560)
Q Consensus 168 ~~e~-~l~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~-~~~~~~~v~~g~~~rlRliN~~~~~~~~ 245 (560)
|.|. +|+|+||+|+...++..... .+ ....+|++|||||.. +.|+. .....++|++|++|||||||+|..+.+.
T Consensus 2 D~D~~vi~lsDW~h~~~~~~~~~~~-~~-~~p~~d~~LINGkg~--~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~ 77 (181)
T d2q9oa2 2 DIDLGVFPITDYYYRAADDLVHFTQ-NN-APPFSDNVLINGTAV--NPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQ 77 (181)
T ss_dssp SEEEEEEEEEEECSSCHHHHHHHHT-TS-CCCCBSEEEETTBCB--CTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEE
T ss_pred CccCeeEEEEecCCCCHHHHHhhcc-cC-CCCCcceEEECCcCC--CCCCCCCcceEEEECCCCEEEEEEecccCCccEE
Confidence 5566 89999999999988765432 33 344689999999974 56654 3567899999999999999999999999
Q ss_pred EEEcCCeEEEEEeCCCccCC--------------------CCCCceEEEEeccCCCCC-CcCCCcceEEEEEecCCC
Q 008592 246 FSIANHTLTIVETDAVYAKS--------------------KAPNANFLIAARPYATGP-ASFDNTTTAGVLEYDQPN 301 (560)
Q Consensus 246 ~~i~gh~~~via~DG~~v~p--------------------~~~~~~y~i~~~~~~~~~-~~~~~~~~~ail~y~~~~ 301 (560)
|+|+||+|+|||+||.+++| +|++++|||++.....+. ....+....|||+|++.+
T Consensus 78 ~~id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~~~~~Y~ir~~~~~~~~~~~~~~~~~~ail~Y~ga~ 154 (181)
T d2q9oa2 78 VSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP 154 (181)
T ss_dssp EEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSC
T ss_pred EEECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCCCCccEEEEEeccccccccCCCCCceEEEEEECCCC
Confidence 99999999999999999998 567789999988654432 123456688999998864
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.88 E-value=1.3e-22 Score=182.17 Aligned_cols=127 Identities=27% Similarity=0.444 Sum_probs=102.4
Q ss_pred CCCcceeEEeeeccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEE
Q 008592 166 QPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELF 245 (560)
Q Consensus 166 ~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~ 245 (560)
.+|+|++|+|+||+++...++.. ...+++.+|||+.. +..|+....++++|++|++|||||||+|+.+.+.
T Consensus 8 ~dD~e~vl~l~DW~h~~~~~~~~--------~~~pd~~liNG~g~-~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~ 78 (172)
T d1hfua2 8 EDDENTIITLADWYHIPAPSIQG--------AAQPDATLINGKGR-YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQ 78 (172)
T ss_dssp BCSTTSEEEEEEECSSCGGGCC-----------CCSEEEETTBCC-BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEE
T ss_pred CCCCeEEEEEEECCCCChHHhhc--------cCCCCcEEECccCc-cCCCCCCCceEEEECCCCEEEEEEeeecCCceEE
Confidence 34789999999999988766422 23579999999963 3445566788999999999999999999999999
Q ss_pred EEEcCCeEEEEEeCCCccCC--------------------CCCCceEEEEeccCCCCC---CcCCCcceEEEEEecCCC
Q 008592 246 FSIANHTLTIVETDAVYAKS--------------------KAPNANFLIAARPYATGP---ASFDNTTTAGVLEYDQPN 301 (560)
Q Consensus 246 ~~i~gh~~~via~DG~~v~p--------------------~~~~~~y~i~~~~~~~~~---~~~~~~~~~ail~y~~~~ 301 (560)
|+|+||+|+|||+||++++| +++.++|||++.....+. ..+.+....|+|+|++..
T Consensus 79 ~~i~~H~~~via~DG~~v~P~~~~~l~i~~gqR~dvlv~~~~~~~~Y~ira~~~~~~~~~~~~~~~~~~~aiL~Y~g~~ 157 (172)
T d1hfua2 79 FSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAA 157 (172)
T ss_dssp EEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSC
T ss_pred EEeCCCeEEEEEeCCEEcccEEeceEeccCCeEEEEEEEcCCCCCcEEEEEEeccCcccccCcCCCceEEEEEEECCCC
Confidence 99999999999999999999 456789999987654432 123345678999999864
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=3.7e-22 Score=182.80 Aligned_cols=95 Identities=28% Similarity=0.462 Sum_probs=80.5
Q ss_pred CCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCC----cCCCCCC--CcCccccCCCCeEEEEEEEcc--------
Q 008592 65 FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRS----GWADGPA--YVTQCPIQTGQSYVYNFTVTG-------- 130 (560)
Q Consensus 65 ~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~----~~~DGv~--~~tq~~i~pG~~~~Y~~~~~~-------- 130 (560)
+|||+|++++||+|+|+|+|+++.+++|||||++.... .+.||+. +.++++|+||++++|+|++++
T Consensus 73 ~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~dg~~~~~~~~~~v~PG~t~tY~~~~~~~~~p~~~d 152 (192)
T d2j5wa1 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGD 152 (192)
T ss_dssp TSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTS
T ss_pred CcCCeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCCCCCCCCcccCcccCCCEEEEEEEccCccccccCC
Confidence 79999999999999999999999999999999988654 2234443 457889999999999999854
Q ss_pred -cCcceeEeecccccc---ccceEeEEEeCCCC
Q 008592 131 -QRGTLFWHAHISWLR---ATLYGPIIILPKQQ 159 (560)
Q Consensus 131 -~~Gt~wYH~H~~~~~---~Gl~G~liV~~~~~ 159 (560)
++||||||||.+... +||+|+|||+++..
T Consensus 153 ~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g~ 185 (192)
T d2j5wa1 153 GNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 185 (192)
T ss_dssp CSEEEEEEECCSSHHHHHHHTCEEEEEEECTTC
T ss_pred CCCceEEEeCCCCcHHHHhCCCeEEEEEccCCC
Confidence 357999999997633 79999999998753
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.87 E-value=5.8e-22 Score=177.36 Aligned_cols=125 Identities=24% Similarity=0.388 Sum_probs=101.1
Q ss_pred CcceeEEeeeccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEE
Q 008592 168 FEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFS 247 (560)
Q Consensus 168 ~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~ 247 (560)
++|++|+|+||+|+.... ....+..++..+|||+.. +..++....++++|++||+|||||||+|+.+.+.|+
T Consensus 11 ~ee~vi~lsDWyh~~~~~-------~~~~~~~~d~~liNG~g~-~~~~~~~~~~~~~v~~g~~~rlRlIN~~~~~~~~~~ 82 (170)
T d1gyca2 11 NESTVITLTDWYHTAARL-------GPRFPLGADATLINGLGR-SASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFS 82 (170)
T ss_dssp SGGGEEEEEEECSSCTTT-------SCSSCSSCSEEEETTBCC-BTTCTTSCCCEEEECTTCEEEEEEEECCSSCCEEEE
T ss_pred CCceEEEEeecCCChhhh-------cccCCCcCCcccccCccc-cCCCCCCCceEEEECCCCEEEEEEeecCCCceeeEE
Confidence 466899999999986532 344556689999999952 333445678899999999999999999999999999
Q ss_pred EcCCeEEEEEeCCCccCC--------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCC
Q 008592 248 IANHTLTIVETDAVYAKS--------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPN 301 (560)
Q Consensus 248 i~gh~~~via~DG~~v~p--------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 301 (560)
|+||+|+|||+||.+++| ++.+++|||++.....+. .+.+....|+|+|++.+
T Consensus 83 id~h~~~via~DG~~v~P~~~d~l~i~~gqRydvlv~~~~~~~~y~ira~~~~~~~-~~~~~~~~aiL~Y~~a~ 155 (170)
T d1gyca2 83 IDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGNYWIRANPNFGTV-GFAGGINSAILRYQGAP 155 (170)
T ss_dssp ETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSC
T ss_pred eCCCeEEEEEeCCeeccceEeeEEEecCCeEEEEEEeCCCCCCcEEEEEecccccc-ccCCCeeEEEEEECCCC
Confidence 999999999999999999 467789999998655543 34455668999998764
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.86 E-value=4.4e-21 Score=179.74 Aligned_cols=161 Identities=19% Similarity=0.290 Sum_probs=116.9
Q ss_pred CCcceeEEeeeccccChHHHHHHHHhcC-CCCCCCceEEEcCcCCC----------------CCCCCCCceeeEEEccCC
Q 008592 167 PFEEVPIIFGEWWKADTETIINEAMQTG-GAPNISDAFTINGLPGP----------------FYNCAAKDTFKLKVTPGK 229 (560)
Q Consensus 167 ~~~e~~l~~~d~~~~~~~~~~~~~~~~~-~~~~~~d~~lvNG~~~~----------------~~~~~~~~~~~~~v~~g~ 229 (560)
+|+|++|+|+||+|....++.......+ .....++.++|||+... ...|++...++++|++|+
T Consensus 4 yD~e~~l~l~DWyh~~~~~~~~~~~~~~~~~~~~~d~~ling~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 83 (209)
T d1aoza2 4 YDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKK 83 (209)
T ss_dssp CSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTC
T ss_pred CCceEEEEEEeCCCCCHHHHHHHHhcCCCCCCCCCCeeEEcCCCCcCCCcccccccccccccccCCCCCCceEEEEcCCC
Confidence 5899999999999999888766554333 23457899999998632 123555677899999999
Q ss_pred EEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC--------------------CCC-CceEEEEeccCCCCCCcCCC
Q 008592 230 TYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--------------------KAP-NANFLIAARPYATGPASFDN 288 (560)
Q Consensus 230 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p--------------------~~~-~~~y~i~~~~~~~~~~~~~~ 288 (560)
+|||||||+|..+.+.|+|+||+|+|||+||++++| ++. .++||+++...... ...
T Consensus 84 ~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~~~~~~---~~~ 160 (209)
T d1aoza2 84 TYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARH---PNT 160 (209)
T ss_dssp EEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSC---CCS
T ss_pred EEEEEEEecCCceeEEEEeCCCcEEEEecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEeccccC---CCc
Confidence 999999999999999999999999999999999998 222 34677776643332 234
Q ss_pred cceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccc
Q 008592 289 TTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIR 334 (560)
Q Consensus 289 ~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~ 334 (560)
....++|+|.+...... +....| ..|.+.|......|...+.
T Consensus 161 ~~~~ail~y~~~~~~~~--~~~~~p--~~p~~~D~~~a~~f~~~~~ 202 (209)
T d1aoza2 161 PPGLTLLNYLPNSVSKL--PTSPPP--QTPAWDDFDRSKNFTYRIT 202 (209)
T ss_dssp CCEEEEEEETTSCTTSC--CSSCCC--CCCCTTCHHHHHHHHTTCC
T ss_pred cceeEEEEeCCCCcCCC--CCCCCC--CCCCccchHHHHhhhhhhh
Confidence 56889999988753311 111113 5667777766555544443
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2.8e-22 Score=178.79 Aligned_cols=84 Identities=25% Similarity=0.462 Sum_probs=74.5
Q ss_pred CCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCc---------ce
Q 008592 65 FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRG---------TL 135 (560)
Q Consensus 65 ~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~G---------t~ 135 (560)
++||+|++++||+|+|+|+|.++.+++|||||+..... +| ++|+||++++|+|+++++.| ||
T Consensus 83 ~lGP~IraevGD~i~V~f~N~a~~p~SiH~HGv~~~~~--~~-------~~v~PGet~tY~w~v~~~~gp~~~d~~c~t~ 153 (179)
T d2j5wa4 83 ILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESS--TV-------TPTLPGETLTYVWKIPERSGAGTEDSACIPW 153 (179)
T ss_dssp TSCCCEEEETTEEEEEEEEECSSSCBCCEESSCBCSCS--CC-------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEE
T ss_pred ccCCeEEEECCCEEEEEEEeCCCCCEeEeeccccCCCC--CC-------CcccCCccEEEEEEecCccCCccCCCCceeE
Confidence 67999999999999999999999999999999997654 44 56899999999999976555 99
Q ss_pred eEeecccccc---ccceEeEEEeCC
Q 008592 136 FWHAHISWLR---ATLYGPIIILPK 157 (560)
Q Consensus 136 wYH~H~~~~~---~Gl~G~liV~~~ 157 (560)
|||||.+... +||+|+|||+.+
T Consensus 154 ~YHShv~~~~d~~sGL~GplIVc~k 178 (179)
T d2j5wa4 154 AYYSTVDQVKDLYSGLIGPLIVCRR 178 (179)
T ss_dssp EEECCTTHHHHHHTTCEEEEEEECC
T ss_pred EEecCCCcHHHhhCCCeEEEEEEeC
Confidence 9999997643 899999999864
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.85 E-value=9.7e-22 Score=171.40 Aligned_cols=86 Identities=13% Similarity=0.281 Sum_probs=75.8
Q ss_pred EEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCc
Q 008592 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517 (560)
Q Consensus 438 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 517 (560)
+.++.|+.|+|.+.|.+. ....||+|+||+.|++.+. ++.++||+.|+||++.+++|++++|
T Consensus 54 ~~v~~gd~v~~~l~n~g~-~~~~h~iH~HG~~f~~~~~-----------------~~~~~dt~~i~pg~~~t~~~~~~~p 115 (139)
T d1sddb2 54 LRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQLGVWPLLPGSFKTLEMKASKP 115 (139)
T ss_dssp CEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEEESSEEECTTEEEEEEEECCSS
T ss_pred cccccCCcEEEEEEecCC-CCCcccEEEcceEEEeccC-----------------CCCcCCeEEECCCCEEEEEEecCCC
Confidence 567789999999999752 3467999999999987543 2457999999999999999999999
Q ss_pred eeeEEEeechhhhhcccEEEEEEc
Q 008592 518 GVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 518 G~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
|.|+||||+++|++.|||+.|.|.
T Consensus 116 G~w~~HcH~~~H~~~GM~~~~~V~ 139 (139)
T d1sddb2 116 GWWLLDTEVGEIQRAGMQTPFLIV 139 (139)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEEE
T ss_pred EeEEEEeCCHHHHhccCcEEEEEC
Confidence 999999999999999999999883
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=7.2e-22 Score=173.52 Aligned_cols=86 Identities=17% Similarity=0.235 Sum_probs=76.9
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.+.++.|++|+|.+.|.+. ....||||+||+.|++. ..++||+.|+||+.++++|++
T Consensus 58 ~p~l~v~~Gd~v~~~l~n~g~-~~~~h~iH~hG~~f~~~--------------------~~~~dt~~i~pg~~~t~~~~a 116 (145)
T d2j5wa2 58 QPGLTMCKGDSVVWYLFSAGN-EADVHGIYFSGNTYLWR--------------------GERRDTANLFPQTSLTLHMWP 116 (145)
T ss_dssp CCCCEEETTCCEEEEEECCCS-TTCCEEEEETTCCEEET--------------------TEEESEEEECTTCEEEEEECC
T ss_pred CCCeEEEcCCeEEEEEEecCC-CCcccceEecccEEEec--------------------ccCccceEECCCCEEEEEEEc
Confidence 445788999999999999653 35679999999999873 246899999999999999999
Q ss_pred cCceeeEEEeechhhhhcccEEEEEEc
Q 008592 515 DNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 515 dnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
++||.|+||||+++|++.|||+.|.|.
T Consensus 117 ~~pG~w~~HCH~~~H~~~GM~~~~~V~ 143 (145)
T d2j5wa2 117 DTEGTFNVECLTTDHYTGGMKQKYTVN 143 (145)
T ss_dssp CSCEEEEEEECSHHHHHTTCEEEEEEE
T ss_pred CCCEeEEEEcCCHHHHhCCCeEEEEEe
Confidence 999999999999999999999999995
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=8.4e-21 Score=167.24 Aligned_cols=87 Identities=17% Similarity=0.264 Sum_probs=77.1
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.+.++.|++|+|.|.|.+. ....||||+||+.|++ ++.++||+.|+||++.+++|++
T Consensus 59 ~p~l~~~~gd~v~~~l~n~g~-~~~~h~~H~hg~~~~~--------------------~~~~~dt~~i~pg~~~~v~f~~ 117 (146)
T d1kcwa2 59 LPGLSMCAEDRVKWYLFGMGN-EVDVHAAFFHGQALTN--------------------KNYRIDTINLFPATLFDAYMVA 117 (146)
T ss_dssp CCCCEEETTEEEEEEEECCCS-TTCCEEEEETTSCCCC--------------------SSSCCSEEEECTTCEEEEEEEE
T ss_pred CCcceEecCCeEEEEEEEcCC-CCcccceEeeeeeeec--------------------cCCCcceEEecCCCEEEEEEEc
Confidence 445789999999999999653 3567999999999842 3568999999999999999999
Q ss_pred cCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 515 DNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 515 dnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
++||.|+||||+++|++.|||+.|+|++
T Consensus 118 ~~pG~w~~HCH~~~H~~~GM~~~~~V~~ 145 (146)
T d1kcwa2 118 QNPGEWMLSCQNLNHLKAGLQAFFQVQE 145 (146)
T ss_dssp CSCEEEEEEECCHHHHHTCCEEEEEEEC
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEEe
Confidence 9999999999999999999999999963
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.81 E-value=1.6e-20 Score=165.38 Aligned_cols=96 Identities=18% Similarity=0.151 Sum_probs=80.1
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
..+.++.|++|+|.+.|.+ ....||||+||++|+++.+..+.+ ...++||+.|+||++++++|+++
T Consensus 51 ~~l~~~~Ge~vri~v~N~~--~~~~~~~H~hG~~f~~v~~~G~~~------------~~~~~~T~~v~pg~~~~~~f~a~ 116 (151)
T d1kbva2 51 NALKAKAGETVRMYVGNGG--PNLVSSFHVIGEIFDKVYVEGGKL------------INENVQSTIVPAGGSAIVEFKVD 116 (151)
T ss_dssp GCEEEETTEEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGSSC------------EECSBSEEEECTTEEEEEEEEEC
T ss_pred cceEEEeCCeEEEEEEcCC--ccccccceeecceeeEEecCCCcC------------CcccceeEecccCceeEEeeecC
Confidence 3478999999999999853 246899999999999997643211 12468999999999999999999
Q ss_pred CceeeEEEeech-hhhhcccEEEEEEcCCCC
Q 008592 516 NPGVWFMHCHLE-VHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 516 npG~w~~HCHil-~H~d~GMm~~~~V~~~~~ 545 (560)
+||.|+||||++ .|++.|||..|.|+++.+
T Consensus 117 ~PG~y~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 117 IPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp SCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred CCceEEEECCcHHHHHhccCeEEEEEcCCCC
Confidence 999999999986 457999999999987654
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.81 E-value=3e-20 Score=165.05 Aligned_cols=103 Identities=16% Similarity=0.067 Sum_probs=85.8
Q ss_pred cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCC---CcCeeEEecCcccCCC--cCCCCCCCcCccccCCCCeEEEEE
Q 008592 52 LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNV---KYNVTIHWHGVRQLRS--GWADGPAYVTQCPIQTGQSYVYNF 126 (560)
Q Consensus 52 ~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l---~~~~~iH~HG~~~~~~--~~~DGv~~~tq~~i~pG~~~~Y~~ 126 (560)
.|.....+.+||+ +||+|++++||+|+|+|+|.. +.+..||+||...... ...++.+...++.+.||++++|+|
T Consensus 45 ~g~~~~~~~~~~~-~~Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~pg~~~~~~f 123 (153)
T d1e30a_ 45 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTNF 123 (153)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCBTTEEEEEEE
T ss_pred cccccceeecCCC-cCCeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccccccCCCccceeeecCCCEEEEEE
Confidence 4778888999996 899999999999999999975 3567788888665432 123444456788999999999999
Q ss_pred EEcccCcceeEeecccccc-ccceEeEEEe
Q 008592 127 TVTGQRGTLFWHAHISWLR-ATLYGPIIIL 155 (560)
Q Consensus 127 ~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 155 (560)
++++++||||||||.+++. +||+|.|||+
T Consensus 124 ~~~~~pGty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 124 TWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EECCCSEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred EeCCCCeEEEEeCCchhHHHCCCEEEEEEC
Confidence 9878999999999999887 7999999996
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.81 E-value=3.4e-22 Score=168.41 Aligned_cols=83 Identities=11% Similarity=0.100 Sum_probs=59.0
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.+.++.|++|+|.+.|.+. ..+.||||+||+.|++. +.++||+.|+|++.++++|++
T Consensus 34 ~~~~~v~~Gd~v~~~v~n~g~-~~~~h~iH~Hg~~f~~~--------------------~~~~dtv~i~pg~~~~v~~~a 92 (116)
T d1sdda2 34 MPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQN--------------------HHKISAITLVSATSTTANMTV 92 (116)
T ss_dssp CCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEET--------------------TEECSCCCEETTCCBC-----
T ss_pred CCCeEEeCCCEEEEEEecccc-CCCceeEEEeccccccC--------------------CcccceEeecccEEEEEEEEc
Confidence 334678899999999999652 35689999999999872 347999999999999999999
Q ss_pred cCceeeEEEeechhhhhcccEEEE
Q 008592 515 DNPGVWFMHCHLEVHTSWGLKMAW 538 (560)
Q Consensus 515 dnpG~w~~HCHil~H~d~GMm~~~ 538 (560)
++||.|+||||+++|++.|||+.+
T Consensus 93 ~~pG~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 93 SPEGRWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp ---CCCCCBCCSTTTGGGTCBCCC
T ss_pred CCCeEEEEEcCCHHHHHccceecC
Confidence 999999999999999999999753
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.71 E-value=2.6e-17 Score=145.07 Aligned_cols=95 Identities=20% Similarity=0.149 Sum_probs=78.4
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCcc--ceeEeCCCCEEEEEE
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAER--NTVGVPSGGWVAIRF 512 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~r--DTv~vpp~g~v~irf 512 (560)
...++++.|++|.++..+. ...|+||+||++|.++... |. +.+++.+ +|+.|++++.+.+.|
T Consensus 65 ~~~l~akvGErV~i~~~~~----n~~s~fHliG~hFD~V~~~-G~-----------~~~~p~~~~qTv~VppG~a~~ve~ 128 (173)
T d2bw4a2 65 DHALTAAVGERVLVVHSQA----NRDTRPHLIGGHGDYVWAT-GK-----------FRNPPDLDQETWLIPGGTAGAAFY 128 (173)
T ss_dssp GGCEEEETTCEEEEEEEES----SSCBCEEEETCCEEEEETT-CC-----------TTSCCEEEESCCCBCTTEEEEEEE
T ss_pred ccCcccccCCeEEEEecCC----CCCccceeccceeEEECCC-Cc-----------ccCCCcCCceeEEccCCccEEEEE
Confidence 4468999999997766553 3689999999999999764 32 2345555 499999999999999
Q ss_pred EecCceeeEEEeec-hhhhhcccEEEEEEcCCCC
Q 008592 513 LADNPGVWFMHCHL-EVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 513 ~adnpG~w~~HCHi-l~H~d~GMm~~~~V~~~~~ 545 (560)
++++||.|+||||. .+|++.|||..|+|..+.+
T Consensus 129 ~f~~PG~y~~v~H~l~ea~~~G~~g~l~V~G~~~ 162 (173)
T d2bw4a2 129 TFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 162 (173)
T ss_dssp ECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EecCceEEEEEechHHHHHhCCCEEEEEEcCCCC
Confidence 99999999999996 5799999999999976544
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.66 E-value=2e-16 Score=138.83 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=83.8
Q ss_pred EEEEECCCCCCcE----EEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCC----CCcCccccCCCCeEEEEEE
Q 008592 57 SIVTVNGQFPGPR----IIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGP----AYVTQCPIQTGQSYVYNFT 127 (560)
Q Consensus 57 ~~~~~ng~~pGP~----i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv----~~~tq~~i~pG~~~~Y~~~ 127 (560)
..++|||+.++++ |++++||+|+|+|.|.. ..++++|+||.+.... |.||. +++..+.|+||++.+++|+
T Consensus 36 ~~~~fNG~~~~~t~~~~l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~v-~~~G~~~~~~~~~T~~v~pg~~~~~~f~ 114 (151)
T d1kbva2 36 EYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKV-YVEGGKLINENVQSTIVPAGGSAIVEFK 114 (151)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEE-EGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred cEEEECCccCCccCccceEEEeCCeEEEEEEcCCccccccceeecceeeEE-ecCCCcCCcccceeEecccCceeEEeee
Confidence 4689999988765 99999999999999965 5689999999886533 35664 3456678999999999999
Q ss_pred EcccCcceeEeeccccc--cccceEeEEEeCCCC
Q 008592 128 VTGQRGTLFWHAHISWL--RATLYGPIIILPKQQ 159 (560)
Q Consensus 128 ~~~~~Gt~wYH~H~~~~--~~Gl~G~liV~~~~~ 159 (560)
+ +++|+||||||...+ ..|++|.|+|+++++
T Consensus 115 a-~~PG~y~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 115 V-DIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp E-CSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred c-CCCceEEEECCcHHHHHhccCeEEEEEcCCCC
Confidence 8 789999999996433 379999999998764
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.66 E-value=4.5e-16 Score=136.80 Aligned_cols=109 Identities=18% Similarity=0.179 Sum_probs=84.6
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccc--eeEeCCCCEEEEEE
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERN--TVGVPSGGWVAIRF 512 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rD--Tv~vpp~g~v~irf 512 (560)
...++++.|++|+++..+. ...|+|||||.+|..+-.. |. +.+++.+| |+.|++++.+++.|
T Consensus 65 ~~~l~akvGe~Vri~~~~~----N~~ssfHlIG~hfD~V~~~-G~-----------~~n~p~~~~qT~~V~pG~~~~v~~ 128 (177)
T d1oe1a2 65 ANALTAKVGETVLLIHSQA----NRDTRPHLIGGHGDWVWET-GK-----------FANPPQRDLETWFIRGGSAGAALY 128 (177)
T ss_dssp GGCEEEETTCEEEEEEEES----SSCBCEEETTCCEEEEETT-CC-----------TTSCCEEEESBCCBCTTEEEEEEE
T ss_pred CCCcccccCCeEEEEecCC----CCCccceecccccceEccC-Ce-----------eCCCCCcCceeEEecCCccEEEEE
Confidence 4458999999999865443 4799999999999998753 32 34667776 99999999999999
Q ss_pred EecCceeeEEEeech-hhhhcccEEEEEEcCCCCCCC-CCCCCCCCCCC
Q 008592 513 LADNPGVWFMHCHLE-VHTSWGLKMAWIVNDGKGPKQ-KLPPPPSDLPK 559 (560)
Q Consensus 513 ~adnpG~w~~HCHil-~H~d~GMm~~~~V~~~~~~~~-~~~~~p~~~~~ 559 (560)
+++.||.|+||||.| +|++.|||..|+|..+.++.- +--.+|+..|+
T Consensus 129 tf~~PG~Y~fV~H~L~ea~~~Ga~g~l~V~G~~~p~~~~~~~~p~p~~~ 177 (177)
T d1oe1a2 129 TFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIPR 177 (177)
T ss_dssp ECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCCC
T ss_pred EecCceEEEEEecHHHHHHhcCCeEEEEecCCCCchhhhcccCCCCCCC
Confidence 999999999999975 689999999999975543211 22235665553
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.64 E-value=2.2e-16 Score=136.98 Aligned_cols=97 Identities=15% Similarity=0.279 Sum_probs=84.4
Q ss_pred eeEEEEECCCC-CCcEEEEecCCEEEEEEEeCC--CcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 55 TKSIVTVNGQF-PGPRIIAREGDRLLIRVINNV--KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 55 ~~~~~~~ng~~-pGP~i~~~~Gd~v~v~~~N~l--~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
...+++|||.. +.|.|++++||.|+++|.|.. +..+++||||...... .+|.....+++|.||++++|+|++ ++
T Consensus 38 ~~~~~tiNG~~~~~p~~~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~~--~~~~~~~dt~~i~pg~~~t~~~~~-~~ 114 (139)
T d1sddb2 38 SHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLEN--GTQQHQLGVWPLLPGSFKTLEMKA-SK 114 (139)
T ss_dssp CCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEEC--SSSCEEESSEEECTTEEEEEEEEC-CS
T ss_pred ccccceeCcEecCCCccccccCCcEEEEEEecCCCCCcccEEEcceEEEec--cCCCCcCCeEEECCCCEEEEEEec-CC
Confidence 35579999975 789999999999999999965 4679999999887655 566666778899999999999997 88
Q ss_pred CcceeEeecccccc-ccceEeEEE
Q 008592 132 RGTLFWHAHISWLR-ATLYGPIII 154 (560)
Q Consensus 132 ~Gt~wYH~H~~~~~-~Gl~G~liV 154 (560)
+|+||||||...+. +||+|.++|
T Consensus 115 pG~w~~HcH~~~H~~~GM~~~~~V 138 (139)
T d1sddb2 115 PGWWLLDTEVGEIQRAGMQTPFLI 138 (139)
T ss_dssp SEEEEEECCCHHHHTTTCEEEEEE
T ss_pred CEeEEEEeCCHHHHhccCcEEEEE
Confidence 99999999987766 899999998
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=2.5e-16 Score=138.45 Aligned_cols=98 Identities=17% Similarity=0.183 Sum_probs=86.8
Q ss_pred eEEEEECCCCCC--cEEEEecCCEEEEEEEeCC--CcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 56 KSIVTVNGQFPG--PRIIAREGDRLLIRVINNV--KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 56 ~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l--~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
..+++|||..+| |.|++++||+|+++|.|.. ...+++|+||...... .+|.+...++.|.||++.+|+|++ +.
T Consensus 46 ~~~~~iNG~~~~~~~~l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~~--~~g~~~~dtv~i~pg~~~~~~~~a-~~ 122 (149)
T d2j5wa5 46 NKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYK--HRGVYSSDVFDIFPGTYQTLEMFP-RT 122 (149)
T ss_dssp TEEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEET--TTTCEEESEEEECTTCEEEEEECC-CS
T ss_pred ccceEECCCcCCCCCCeEEEcCCcEEEEEEecCCCCCccceEEEeeEeeee--ccCCCCcceEEECCCceEEEEEeC-CC
Confidence 378999999998 8899999999999999976 4579999999876654 678777778899999999999997 88
Q ss_pred CcceeEeecccccc-ccceEeEEEeC
Q 008592 132 RGTLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 132 ~Gt~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
+|+||||||...+. .||.|.++|.+
T Consensus 123 pG~w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 123 PGIWLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp CEEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred CeeEEEEcCCHHHHhccCceEEEEec
Confidence 99999999997766 89999999975
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=7.6e-16 Score=134.98 Aligned_cols=94 Identities=13% Similarity=0.061 Sum_probs=81.1
Q ss_pred EEEEECCCCCC--cEEEEecCCEEEEEEEeCC--CcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccC
Q 008592 57 SIVTVNGQFPG--PRIIAREGDRLLIRVINNV--KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQR 132 (560)
Q Consensus 57 ~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l--~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~ 132 (560)
.+++|||+.+| |.|++++||+|+++|.|.. ...+++|+||......+ .....++|.||++++|+|.+ +++
T Consensus 47 ~~~tiNG~~~~~~p~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~~~-----~~~dt~~i~pg~~~~v~f~~-~~p 120 (146)
T d1kcwa2 47 RMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTNKN-----YRIDTINLFPATLFDAYMVA-QNP 120 (146)
T ss_dssp EEEESSSCCSSCCCCCEEETTEEEEEEEECCCSTTCCEEEEETTSCCCCSS-----SCCSEEEECTTCEEEEEEEE-CSC
T ss_pred ceEEECCccCCCCCcceEecCCeEEEEEEEcCCCCcccceEeeeeeeeccC-----CCcceEEecCCCEEEEEEEc-CCC
Confidence 57899999999 9999999999999999975 45799999998765432 23345789999999999998 889
Q ss_pred cceeEeecccccc-ccceEeEEEeC
Q 008592 133 GTLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 133 Gt~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
|+||||||..... .||.|.++|++
T Consensus 121 G~w~~HCH~~~H~~~GM~~~~~V~~ 145 (146)
T d1kcwa2 121 GEWMLSCQNLNHLKAGLQAFFQVQE 145 (146)
T ss_dssp EEEEEEECCHHHHHTCCEEEEEEEC
T ss_pred eeEEEEcCCHHHHhcCCeEEEEEEe
Confidence 9999999987766 89999999974
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=5e-16 Score=135.74 Aligned_cols=94 Identities=14% Similarity=0.116 Sum_probs=80.8
Q ss_pred eEEEEECCCCCC--cEEEEecCCEEEEEEEeCC--CcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 56 KSIVTVNGQFPG--PRIIAREGDRLLIRVINNV--KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 56 ~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l--~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
..+++|||+.+| |.|++++||+|+++|.|.. ...+++|+||...... +. ...++.|.||++.+|+|.+ +.
T Consensus 45 n~~~tiNG~~~~~~p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~~----~~-~~dt~~i~pg~~~t~~~~a-~~ 118 (145)
T d2j5wa2 45 NKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWR----GE-RRDTANLFPQTSLTLHMWP-DT 118 (145)
T ss_dssp TEEEEETTBCTTCCCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEET----TE-EESEEEECTTCEEEEEECC-CS
T ss_pred cceEEECCccCCCCCCeEEEcCCeEEEEEEecCCCCcccceEecccEEEec----cc-CccceEECCCCEEEEEEEc-CC
Confidence 368999999999 9999999999999999955 5679999999876432 21 2345789999999999997 88
Q ss_pred CcceeEeecccccc-ccceEeEEEe
Q 008592 132 RGTLFWHAHISWLR-ATLYGPIIIL 155 (560)
Q Consensus 132 ~Gt~wYH~H~~~~~-~Gl~G~liV~ 155 (560)
+|+||||||...+. .||.|.++|+
T Consensus 119 pG~w~~HCH~~~H~~~GM~~~~~V~ 143 (145)
T d2j5wa2 119 EGTFNVECLTTDHYTGGMKQKYTVN 143 (145)
T ss_dssp CEEEEEEECSHHHHHTTCEEEEEEE
T ss_pred CEeEEEEcCCHHHHhCCCeEEEEEe
Confidence 99999999988776 8999999997
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.57 E-value=3.9e-15 Score=126.97 Aligned_cols=95 Identities=15% Similarity=0.175 Sum_probs=81.3
Q ss_pred cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 52 LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 52 ~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
.+....++++++++++|+|+|++||+|+++|+|.......+|+|++...+. +..+.||++.+|+|++ ++
T Consensus 36 ~~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~ltN~d~~~~v~H~~~i~~~~~----------~~~~~PG~~~~~~F~a-~~ 104 (132)
T d1fwxa1 36 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGV----------AMEIGPQMTSSVTFVA-AN 104 (132)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------EEEECTTCEEEEEEEC-CS
T ss_pred CceEEEEEeecCcccCCEEEEcCCCEEEEEEEcCCCCccceEeechhhhcc----------ccccCCCEEEEEEEeC-CC
Confidence 456777889999999999999999999999999998888999999875543 2467899999999997 89
Q ss_pred CcceeEeeccc-cc-cccceEeEEEeCC
Q 008592 132 RGTLFWHAHIS-WL-RATLYGPIIILPK 157 (560)
Q Consensus 132 ~Gt~wYH~H~~-~~-~~Gl~G~liV~~~ 157 (560)
+||||||||.- +. -.||+|.|||+|+
T Consensus 105 ~G~y~~~C~~~cg~~H~~M~G~iiVePk 132 (132)
T d1fwxa1 105 PGVYWYYCQWFCHALHMEMRGRMLVEPK 132 (132)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred CeEEEEECccccCcchhcCEEEEEEEcC
Confidence 99999999953 22 2799999999874
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=99.54 E-value=1.9e-14 Score=119.43 Aligned_cols=94 Identities=16% Similarity=0.173 Sum_probs=78.1
Q ss_pred eeecCce-eEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEE
Q 008592 49 ITRLCQT-KSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFT 127 (560)
Q Consensus 49 ~~~~g~~-~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~ 127 (560)
++.+|.. +.++..|..++.++|++++||+|+++++|.....+++++|+.... ..+.||++.+|+|+
T Consensus 18 ~~~~g~~~~~~~~~~~~~~P~~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~~-------------~~~~pG~t~~~~f~ 84 (112)
T d1ibya_ 18 LNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDAFGVQ-------------EVIKAGETKTISFT 84 (112)
T ss_dssp EEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEEE
T ss_pred eccCCeEEEEEEeecCCCCCCEEEEeCCCEEEEEEEeCCCCceeeeecccccc-------------cccCCcceEEEEEE
Confidence 4456765 556777877766799999999999999999888888888876432 45789999999999
Q ss_pred EcccCcceeEeeccccccccceEeEEEeC
Q 008592 128 VTGQRGTLFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 128 ~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
+ +++|+||||||.+....||.|.|||.+
T Consensus 85 ~-~~~G~y~y~C~~~~~~~~M~G~i~V~e 112 (112)
T d1ibya_ 85 A-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp C-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred e-ccceEEEEECcccChhhcCeEEEEEEC
Confidence 7 899999999998777788999999974
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.53 E-value=3.6e-15 Score=131.71 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=75.9
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEE-
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFL- 513 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~- 513 (560)
.+.+.++.|++|+|.+.|.+ ..+.||||||.+.+.+..... .....+...++..+.||+...++|+
T Consensus 59 ~Pti~v~~Gd~V~i~v~N~~--~~~~H~~~ih~~g~~~~~~~~-----------~~~~~~~~~~~~~v~pg~~~~~~f~~ 125 (153)
T d1e30a_ 59 NPTLEIPAGATVDVTFINTN--KGFGHSFDITKKGPPYAVMPV-----------IDPIVAGTGFSPVPKDGKFGYTNFTW 125 (153)
T ss_dssp SCEEEECTTCEEEEEEEECC--TTCCCCCEEESCCSSCCSSCC-----------CCSEEEEBCCCCCCBTTEEEEEEEEE
T ss_pred CCeEEEeCCCEEEEEEEeCC--CCCcccEEEEcCCCCcccccc-----------ccccCCCccceeeecCCCEEEEEEEe
Confidence 35689999999999999964 247899999998765433221 1122345678888999999999997
Q ss_pred ecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 514 ADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 514 adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
++.||.|.||||+..|++.||+..|.|+
T Consensus 126 ~~~pGty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 126 HPTAGTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp CCCSEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred CCCCeEEEEeCCchhHHHCCCEEEEEEC
Confidence 5899999999999999999999999884
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.48 E-value=7.9e-16 Score=128.92 Aligned_cols=91 Identities=22% Similarity=0.221 Sum_probs=62.5
Q ss_pred eEEEEECCCCCC--cEEEEecCCEEEEEEEeCC--CcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 56 KSIVTVNGQFPG--PRIIAREGDRLLIRVINNV--KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 56 ~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l--~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
..+|+|||..+| |.|++++||+|+++|.|.. +..+++|+||...... |. ...+++|.||++.+|+|++ +.
T Consensus 21 ~~~~tiNG~~~~~~~~~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~~----~~-~~dtv~i~pg~~~~v~~~a-~~ 94 (116)
T d1sdda2 21 SLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQN----HH-KISAITLVSATSTTANMTV-SP 94 (116)
T ss_dssp CEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEET----TE-ECSCCCEETTCCBC--------
T ss_pred CcEEEECCCcCCCCCCeEEeCCCEEEEEEeccccCCCceeEEEeccccccC----Cc-ccceEeecccEEEEEEEEc-CC
Confidence 357999999998 6799999999999999954 5679999999876432 22 2344789999999999997 78
Q ss_pred CcceeEeecccccc-ccceEeE
Q 008592 132 RGTLFWHAHISWLR-ATLYGPI 152 (560)
Q Consensus 132 ~Gt~wYH~H~~~~~-~Gl~G~l 152 (560)
+|+||||||..... .||+|.|
T Consensus 95 pG~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 95 EGRWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp -CCCCCBCCSTTTGGGTCBCCC
T ss_pred CeEEEEEcCCHHHHHccceecC
Confidence 99999999987766 7998864
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=7.2e-15 Score=130.46 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=71.7
Q ss_pred CcceeEEeeeccccChHHHHHH-HHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEE
Q 008592 168 FEEVPIIFGEWWKADTETIINE-AMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFF 246 (560)
Q Consensus 168 ~~e~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~ 246 (560)
.+|++|+|+||+++...++... ..........+|.++|||+..| .+.++ |++|||||||+|..+.+.|
T Consensus 8 ~ddiplvi~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~p----------~~~~~-~~~~RlR~iNa~~~~~~~~ 76 (165)
T d1kv7a2 8 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP----------QHAAP-RGWLRLRLLNGCNARSLNF 76 (165)
T ss_dssp TTEEEEEEEEECBCTTSSBCCCCCHHHHHHCCCCSEEEETTBSSC----------EEEEE-EEEEEEEEEECCSSCCEEE
T ss_pred CCcEeEEeEcccCCCCCCCccCCCCcccCCCccCCEEEEcCcccc----------eEecc-CcEEEEEEEEcccCceeeE
Confidence 5689999999987665433110 0000011245799999999754 56665 6789999999999999999
Q ss_pred EE-cCCeEEEEEeCCCcc-CCC-------CCCceEEEEec
Q 008592 247 SI-ANHTLTIVETDAVYA-KSK-------APNANFLIAAR 277 (560)
Q Consensus 247 ~i-~gh~~~via~DG~~v-~p~-------~~~~~y~i~~~ 277 (560)
++ +||+|+|||+||+++ +|. .+.+||.+.+.
T Consensus 77 ~~~~g~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 116 (165)
T d1kv7a2 77 ATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVE 116 (165)
T ss_dssp EETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred EecCCCeEEEEEeCCccccCceEeCeEEECCCCEEEEEEE
Confidence 98 699999999999999 562 24457776654
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.46 E-value=1.9e-14 Score=128.79 Aligned_cols=102 Identities=19% Similarity=0.245 Sum_probs=75.5
Q ss_pred CCCCcceeEEeeeccccChHHHHHHHHh----------cCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEE
Q 008592 165 PQPFEEVPIIFGEWWKADTETIINEAMQ----------TGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLR 234 (560)
Q Consensus 165 ~~~~~e~~l~~~d~~~~~~~~~~~~~~~----------~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlR 234 (560)
+.+++|++|+|+||+++...++...... .......++.++|||+.+ +.+++++ ++||||
T Consensus 3 P~gd~Diplvl~D~~~~~dg~l~~~~~~~~~~~~~~~~~~~~g~~Gd~~lvNG~~~----------p~~~v~~-~~~RlR 71 (174)
T d1gska2 3 PSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEP-RKYRFR 71 (174)
T ss_dssp CCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCS-SEEEEE
T ss_pred CCCCCCEEEEeEecccCCCCCEEeeccccCCCcCCcccccccCccCCeEEecCccc----------eEEEecC-ceEEEE
Confidence 4568899999999987766554211100 011234578999999975 4677765 679999
Q ss_pred EEecCCCCeEEEEEc-CCeEEEEEeCCCccC-CC-------CCCceEEEEec
Q 008592 235 MINAALNDELFFSIA-NHTLTIVETDAVYAK-SK-------APNANFLIAAR 277 (560)
Q Consensus 235 liN~~~~~~~~~~i~-gh~~~via~DG~~v~-p~-------~~~~~y~i~~~ 277 (560)
|||+|..+.+.|+++ ||+|+|||+||++++ |. .+.+||.+.+.
T Consensus 72 liNa~~~~~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~ 123 (174)
T d1gska2 72 VINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIID 123 (174)
T ss_dssp EEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred EEecccCceeeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEE
Confidence 999999999999995 889999999999995 62 24567777764
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.40 E-value=1.9e-13 Score=116.29 Aligned_cols=93 Identities=26% Similarity=0.344 Sum_probs=68.6
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
+++.++.|++|++.+.|.. ....+-+|.||.++ ...... ......+...|.||+...++|.++
T Consensus 34 P~i~v~~GD~v~i~l~N~l--~~~~~~iH~Hg~~~--~~~~~~-------------~~~~~~~~~~I~PG~s~~y~f~a~ 96 (129)
T d1aoza1 34 PTIRANAGDSVVVELTNKL--HTEGVVIHWHGILQ--RGTPWA-------------DGTASISQCAINPGETFFYNFTVD 96 (129)
T ss_dssp CCEEEETTCEEEEEEEECC--SSCCBCEEEETCCC--TTCGGG-------------SCCBTTTBCCBCTTCEEEEEEECC
T ss_pred CeEEEECCcEEEEEEEeCC--CCCCeeeeecccee--eccCcc-------------ccccccccceECCCCEEEEEEECC
Confidence 3478999999999999963 22355566666543 111100 111222345689999999999999
Q ss_pred CceeeEEEeechhhhhcccEEEEEEcCCCC
Q 008592 516 NPGVWFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 516 npG~w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
+||.|+||||+..|...||+..|.|++++.
T Consensus 97 ~~Gt~~YH~H~~~h~~~Gm~G~~iV~~~~~ 126 (129)
T d1aoza1 97 NPGTFFYHGHLGMQRSAGLYGSLIVDPPQG 126 (129)
T ss_dssp SCEEEEEEECSTTTGGGTCEEEEEEECCTT
T ss_pred CCCceEEecCCHHHHhCCCEEEEEEcCCCC
Confidence 999999999999999999999999987654
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.33 E-value=3.5e-13 Score=98.92 Aligned_cols=45 Identities=24% Similarity=0.462 Sum_probs=38.9
Q ss_pred ccCCCCeEEEEEEEcccCc---------ceeEeecccccc---ccceEeEEEeCCCC
Q 008592 115 PIQTGQSYVYNFTVTGQRG---------TLFWHAHISWLR---ATLYGPIIILPKQQ 159 (560)
Q Consensus 115 ~i~pG~~~~Y~~~~~~~~G---------t~wYH~H~~~~~---~Gl~G~liV~~~~~ 159 (560)
+|+||++|+|+|++++.+| |||||||.+... +||+|+|||+++..
T Consensus 2 ~V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g~ 58 (67)
T d1sddb1 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGT 58 (67)
T ss_dssp CBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTS
T ss_pred cCCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCCC
Confidence 5899999999999976666 999999998633 89999999998764
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.27 E-value=1.7e-12 Score=113.92 Aligned_cols=86 Identities=24% Similarity=0.361 Sum_probs=64.8
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
++++++.|++|+|.+.|... ....|.+|+||... +.+ -...-.|.||+..+++|+++
T Consensus 64 P~I~v~~GD~V~i~l~N~~~-~~~~Hg~~~h~~~~-----~~~-----------------~~~~~~i~PGet~ty~f~a~ 120 (157)
T d2bw4a1 64 PLMVVHENDYVELRLINPDT-NTLLHNIDFHAATG-----ALG-----------------GGALTQVNPGEETTLRFKAT 120 (157)
T ss_dssp CEEEEETTCEEEEEEEECTT-CCSCBCCEETTSCS-----GGG-----------------GGGGCCBCTTEEEEEEEECC
T ss_pred ceEEEECCcEEEEEEEeCCC-CcceEeeeecccCC-----CcC-----------------CcceeeECcCCEEeEEEECC
Confidence 46899999999999999531 23456666666431 100 01112388999999999999
Q ss_pred CceeeEEEee----chhhhhcccEEEEEEcCCC
Q 008592 516 NPGVWFMHCH----LEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 516 npG~w~~HCH----il~H~d~GMm~~~~V~~~~ 544 (560)
+||.|.|||| +.+|...||...|.|++.+
T Consensus 121 ~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~p~e 153 (157)
T d2bw4a1 121 KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRD 153 (157)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTB
T ss_pred CCccceEEECCCCchHHHHhCCCEEEEEEeCCC
Confidence 9999999999 7789999999999996543
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.27 E-value=4.1e-12 Score=111.04 Aligned_cols=85 Identities=19% Similarity=0.291 Sum_probs=67.2
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
++++++.|++|+|.+.|... +...|.+|+||..... + -...-.|.||+...++|+++
T Consensus 62 Pti~v~~Gd~v~i~~~N~~~-~~~~H~~~~h~~~~~~-----~-----------------~~~~~~i~PG~t~ty~f~a~ 118 (153)
T d1mzya1 62 PLMIVHEGDYVELTLINPPE-NTMPHNIDFHAATGAL-----G-----------------GGGLTLINPGEKVVLRFKAT 118 (153)
T ss_dssp CEEEEETTCEEEEEEEECTT-CCSCBCCEETTSCSGG-----G-----------------GGGGCCBCTTEEEEEEEECC
T ss_pred CcEEEeCCCEEEEEEEcCCC-CceEccCccccCCcCC-----C-----------------CCccccccCCCEEEEEEEcC
Confidence 46899999999999999532 3467889999864210 0 01122478999999999999
Q ss_pred CceeeEEEee-----chhhhhcccEEEEEEcCC
Q 008592 516 NPGVWFMHCH-----LEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 516 npG~w~~HCH-----il~H~d~GMm~~~~V~~~ 543 (560)
+||.|+|||| +.+|...||+..+.|++.
T Consensus 119 ~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~ 151 (153)
T d1mzya1 119 RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 151 (153)
T ss_dssp SCEEEEEECCCSTTHHHHHHHTTCEEEEEEECT
T ss_pred CCceEEEEeCCcccccHhHHhCCCEEEEEEecC
Confidence 9999999999 567999999999999654
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.20 E-value=1.2e-11 Score=107.97 Aligned_cols=85 Identities=20% Similarity=0.295 Sum_probs=61.8
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
++++++.|++|++.+.|... ....|.+|+|+... ..+ ....+ .|.||++.+++|+++
T Consensus 58 P~i~v~~Gd~v~v~~~N~~~-~~~~H~~~~h~~~~-----~~~---------------~~~~~--~i~PG~t~~y~f~a~ 114 (151)
T d1kbva1 58 RMIRVREGDTVEVEFSNNPS-STVPHNVDFHAATG-----QGG---------------GAAAT--FTAPGRTSTFSFKAL 114 (151)
T ss_dssp CBEEEETTCEEEEEEEECTT-CSSCBCCEETTCCS-----GGG---------------GTTTT--CBCTTEEEEEEEECC
T ss_pred CeEEEECCCEEEEEEEcCCC-Cceeeecccccccc-----CCC---------------Cccee--eeCCCCEEEEEEeCC
Confidence 35889999999999999532 22345555554321 111 01112 268999999999999
Q ss_pred CceeeEEEee---chhhhhcccEEEEEEcCC
Q 008592 516 NPGVWFMHCH---LEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 516 npG~w~~HCH---il~H~d~GMm~~~~V~~~ 543 (560)
+||.|+|||| ..+|.+.||+..+.|++.
T Consensus 115 ~~Gt~~YH~H~~~~~~h~~~Gm~G~liV~p~ 145 (151)
T d1kbva1 115 QPGLYIYHCAVAPVGMHIANGMYGLILVEPK 145 (151)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECT
T ss_pred CCeEEEEECCCCChHHHHhCCCEEEEEEECC
Confidence 9999999999 457999999999999653
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.19 E-value=3.2e-11 Score=106.37 Aligned_cols=93 Identities=20% Similarity=0.251 Sum_probs=71.4
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
++++++.|+.|+|.+.|.. ....+.+|+||..+.......| .+.......+++|++..++|.++
T Consensus 67 PtI~~~~Gd~v~v~l~N~l--~~~~~~ih~Hg~~~~~~~~~~g--------------~~~~~~~~i~~pg~~~~y~f~~~ 130 (162)
T d2q9oa1 67 PNIVANWGDTVEVTVINNL--VTNGTSIHWHGIHQKDTNLHDG--------------ANGVTECPIPPKGGQRTYRWRAR 130 (162)
T ss_dssp CCEEEETTCEEEEEEEEEC--SSCCBCEEEETCCCTTCGGGSC--------------CBTTTBCCBCTTTEEEEEEEECC
T ss_pred CeEEEECCcEEEEEEEecC--cccccccccccccccCCCcCCC--------------CcccccceecCCCCEEEeeecCC
Confidence 3488999999999999953 2467889999988632111111 11122234468899999999999
Q ss_pred CceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 516 NPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 516 npG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
.+|.|.||||+..|...||+..|.|++++
T Consensus 131 ~~Gt~wYH~H~~~q~~~Gl~G~~iV~~p~ 159 (162)
T d2q9oa1 131 QYGTSWYHSHFSAQYGNGVVGTIQINGPA 159 (162)
T ss_dssp SCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred CCEEEEeecCCHHHHhCCCEEEEEECCCC
Confidence 99999999999999999999999998764
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.18 E-value=9.9e-12 Score=109.16 Aligned_cols=84 Identities=25% Similarity=0.364 Sum_probs=66.0
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
++.++.|++|+|.+.|... ....|.||+||..+.+ .+ .. .-.|.||+..+++|+++.
T Consensus 66 tI~v~~Gd~v~v~~~N~~~-~~h~h~ih~hg~~~~~----~g--------~~----------~~~I~PG~t~ty~f~a~~ 122 (159)
T d1oe2a1 66 TLVVHEGDYVQLTLVNPAT-NAMPHNVEFHGATGAL----GG--------AK----------LTNVNPGEQATLRFKADR 122 (159)
T ss_dssp CEEEETTCEEEEEEEECTT-CCSCBCCEETTSCSGG----GG--------GG----------GCCBCTTEEEEEEEECCS
T ss_pred eEEEECCcEEEEEEECCCc-cccccceeeccccCCC----CC--------cc----------cccCCCCCeEEEEEEcCC
Confidence 5889999999999999642 2357888999865311 00 00 013789999999999999
Q ss_pred ceeeEEEee----chhhhhcccEEEEEEcCC
Q 008592 517 PGVWFMHCH----LEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 517 pG~w~~HCH----il~H~d~GMm~~~~V~~~ 543 (560)
||.|.|||| +..|...||...+.|++.
T Consensus 123 ~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p~ 153 (159)
T d1oe2a1 123 SGTFVYHCAPEGMVPWHVVSGMSGTLMVLPR 153 (159)
T ss_dssp CEEEEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred CceEEEEeCCCCCchhHHhCCCEEEEEEECC
Confidence 999999999 678999999999999654
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.15 E-value=7.4e-11 Score=99.72 Aligned_cols=94 Identities=15% Similarity=0.178 Sum_probs=75.5
Q ss_pred CceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccC
Q 008592 53 CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQR 132 (560)
Q Consensus 53 g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~ 132 (560)
+....++.+..++..+.|+|++||+|+++|+|.....-.+|.+++...+. +..+.||++.+++|++ +++
T Consensus 36 ~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~v----------~~~~~PG~t~~~~f~~-~~~ 104 (131)
T d1qnia1 36 KVRVYMTSVAPQYGMTDFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHGV----------SMEISPQQTASVTFTA-GKP 104 (131)
T ss_dssp EEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------EEEECTTCEEEEEEEC-CSS
T ss_pred ceeEEEEEeccCCccceEEecCCCEEEEEEEccCCCCcceEEEEEeccCc----------ccccCCCceEEEEEEc-CCC
Confidence 35667889999999999999999999999999887665666666544322 1457899999999997 899
Q ss_pred cceeEeecc-cccc-ccceEeEEEeCC
Q 008592 133 GTLFWHAHI-SWLR-ATLYGPIIILPK 157 (560)
Q Consensus 133 Gt~wYH~H~-~~~~-~Gl~G~liV~~~ 157 (560)
|+|||||+. .+.. .+|.|.|+|+++
T Consensus 105 G~y~~~C~~~cg~~H~~M~g~i~Vepa 131 (131)
T d1qnia1 105 GVYWYYCNWFCHALHMEMVGRMLVEAA 131 (131)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEECC
T ss_pred EEEEEECccccCcchhcCeeEEEEEeC
Confidence 999999985 2332 799999999874
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.04 E-value=4.6e-10 Score=94.74 Aligned_cols=95 Identities=18% Similarity=0.262 Sum_probs=70.2
Q ss_pred cEEEEecCCCEEEEEEeeCCcC--ccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEE
Q 008592 435 TKVVVLPFNASVEVVMQDTSII--VAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRF 512 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~--~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf 512 (560)
.++++++.|+++++.+.|.... ....|.||+||-++. + ..+. +...-.....|+||+..+.+|
T Consensus 33 GP~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~----~-~~~~----------dgv~g~~~~~I~PG~~~~y~~ 97 (131)
T d1hfua1 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQR----G-TNWA----------DGADGVNQCPISPGHAFLYKF 97 (131)
T ss_dssp SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCT----T-CGGG----------SCCBTTTBCCBCTTCEEEEEE
T ss_pred CCeEEEECCCEEEEEEEECCCCccccccceEEeCCcccC----C-CCCC----------CCCcccccceECCCCeEEEEE
Confidence 4568999999999999996421 124789999996541 1 1000 000111124588999999999
Q ss_pred E-ecCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 513 L-ADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 513 ~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+ ++.+|.|.||||...|...||...+.|++++
T Consensus 98 ~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 98 TPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp CCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred eCCCCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 8 5889999999999999999999999998764
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=99.03 E-value=4.9e-11 Score=102.79 Aligned_cols=102 Identities=16% Similarity=0.053 Sum_probs=67.7
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEE----eCCCCCCCCCCCCCCC-CCCCCccceeEeCCCCEEEEE
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVA----QGFGNFDPNKDPAKFN-LVDPAERNTVGVPSGGWVAIR 511 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~----~~~g~~~~~~~~~~~~-~~~p~~rDTv~vpp~g~v~ir 511 (560)
.+.++.|++|+|++.|.+. ..||.+++...+.... ...+. ........+. -......+|..+.+++...|.
T Consensus 33 ~i~v~aG~~V~~~~~N~~~---~~~~Hn~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i~ 108 (139)
T d1qhqa_ 33 SLSLPANTVVRLDFVNQNN---LGVQHNWVLVNGGDDVAAAVNTAAQ-NNADALFVPPPDTPNALAWTAMLNAGESGSVT 108 (139)
T ss_dssp EEEEETTCEEEEEEEECCS---SCCCBCCEEESSSHHHHHHHHHHHH-TCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred eEEECCCCEEEEEEeCCcc---cceeEEEeecccchhhHHHHHHhhh-ccchhccccCCCcccccccccccCCcceEEEE
Confidence 3789999999999999652 4454444332221000 00000 0000000000 112345678999999999999
Q ss_pred EEecCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 512 FLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 512 f~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
|+++.||.|.||||+..|.+.||...|.|.|
T Consensus 109 f~~~~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 109 FRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp EECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EecCCCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 9999999999999999999999999999864
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=98.97 E-value=9.8e-10 Score=90.43 Aligned_cols=74 Identities=23% Similarity=0.347 Sum_probs=62.4
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.|+|++.|.+ ...|+||+|++.. +..+.||+...++|+++.
T Consensus 39 ~i~v~~Gd~V~~~~~n~d---~~~H~~~i~~~~~----------------------------~~~~~pG~t~~~~f~~~~ 87 (112)
T d1ibya_ 39 TLVVKKGDAVKVVVENKS---PISEGFSIDAFGV----------------------------QEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEETTCEEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEEECCS
T ss_pred EEEEeCCCEEEEEEEeCC---CCceeeeeccccc----------------------------ccccCCcceEEEEEEecc
Confidence 588999999999999964 3689999998754 344778899999999999
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
||.|.||||+--| ..||.+.|.|++
T Consensus 88 ~G~y~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 88 AGAFTIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp CEEEEEBCSSSCT-TTBCCEEEEEEC
T ss_pred ceEEEEECcccCh-hhcCeEEEEEEC
Confidence 9999999998544 477999999864
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=8.8e-10 Score=99.61 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=73.9
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+++.++.|++|+|++.|.. ..+|.||.||..+.....+....+ ......+.+..|+||+..+.+|.+
T Consensus 75 GP~Ira~~GD~v~V~~~N~~---~~p~siH~HG~~~~~~~~g~~~~d---------g~~~~~~~~~~v~PG~t~tY~~~~ 142 (192)
T d2j5wa1 75 GPIIKAETGDKVYVHLKNLA---SRPYTFHSHGITYYKEHEGAIYPD---------NTTDFQRADDKVYPGEQYTYMLLA 142 (192)
T ss_dssp CCCEEEETTCEEEEEEEEES---SSCBCCEESSSBCCGGGCCCCSCC---------CCCGGGTGGGCBCTTCEEEEEEEC
T ss_pred CCeEEEECCcEEEEEEEeCC---CCCcceeccCcccCCcccccccCC---------CCCCCCcccCcccCCCEEEEEEEc
Confidence 45689999999999999964 489999999998744322211000 111234456679999999999997
Q ss_pred c----------CceeeEEEeec--hhhhhcccEEEEEEcCCCC
Q 008592 515 D----------NPGVWFMHCHL--EVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 515 d----------npG~w~~HCHi--l~H~d~GMm~~~~V~~~~~ 545 (560)
. ++|.|+||||+ ..|...||+..+.|.+...
T Consensus 143 ~~~~~p~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g~ 185 (192)
T d2j5wa1 143 TEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 185 (192)
T ss_dssp CSTTSCCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTC
T ss_pred cCccccccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEccCCC
Confidence 4 36899999997 4599999999999977543
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.91 E-value=1e-09 Score=93.81 Aligned_cols=87 Identities=24% Similarity=0.387 Sum_probs=68.1
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+++.++.|+.|++.+.|.. ...|.||+||.+. .. ..+.. + ...++||+..+.+|.+
T Consensus 45 GP~i~~~~Gd~v~v~~~N~l---~~~~siH~HG~~~---~~---~~dG~----------~----~~~i~pg~~~~y~~~~ 101 (140)
T d1kv7a1 45 GPAVKLQRGKAVTVDIYNQL---TEETTLHWHGLEV---PG---EVDGG----------P----QGIIPPGGKRSVTLNV 101 (140)
T ss_dssp CCEEEEETTCEEEEEEEECS---SSCBCCEEETCCC---CG---GGSCC----------T----TCCBCTTCEEEEEEEC
T ss_pred CceEEEECCCEEEEEEEeCc---cccccEeeeeeec---CC---ccCCC----------c----cceEccCCceeEEEEE
Confidence 35799999999999999975 4799999999763 11 11100 0 1237899999999999
Q ss_pred cCc-eeeEEEeec----hhhhhcccEEEEEEcCCC
Q 008592 515 DNP-GVWFMHCHL----EVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 515 dnp-G~w~~HCHi----l~H~d~GMm~~~~V~~~~ 544 (560)
+.+ |.|.||||. ..|...||+..+.|++++
T Consensus 102 ~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 102 DQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp CSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred ecCCeeEEEEECCCCChHHHHhCCCeEEEEECCcc
Confidence 886 999999995 478999999999998754
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.90 E-value=1.1e-09 Score=92.32 Aligned_cols=94 Identities=26% Similarity=0.323 Sum_probs=69.1
Q ss_pred EEEEecCCCEEEEEEeeCCcC--ccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEE
Q 008592 436 KVVVLPFNASVEVVMQDTSII--VAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFL 513 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~--~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ 513 (560)
++++++.|+.|++.+.|.... ....|.+|+||...- +.... ..+..-....|.||++...+|+
T Consensus 34 PtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~----~~~~~-----------d~~~~~s~~~i~PG~s~~Y~~~ 98 (130)
T d1gyca1 34 PLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQA----GTNWA-----------DGPAFVNQCPIASGHSFLYDFH 98 (130)
T ss_dssp CCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT----TCGGG-----------SCCBTTTBCCBCTTEEEEEEEE
T ss_pred CeEEEECCeEEEEEEEecCCCcccCCceeEEecccccc----ccCCC-----------CCccccccCCCCCCCeEEEEEE
Confidence 458999999999999996421 125678899886641 00000 0111112235899999999999
Q ss_pred e-cCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 514 A-DNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 514 a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+ +.+|.|.||||...|...||...+.|++++
T Consensus 99 ~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~p~ 130 (130)
T d1gyca1 99 VPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130 (130)
T ss_dssp CSSCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCCCCceeEEecCCHHHHhCCCEEEEEEeCCC
Confidence 7 679999999999999999999999998764
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.90 E-value=2.7e-09 Score=93.28 Aligned_cols=101 Identities=18% Similarity=0.190 Sum_probs=79.3
Q ss_pred eEEEEECCCCCCcE----EEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC------CcCccccCCCCeEEEE
Q 008592 56 KSIVTVNGQFPGPR----IIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA------YVTQCPIQTGQSYVYN 125 (560)
Q Consensus 56 ~~~~~~ng~~pGP~----i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~tq~~i~pG~~~~Y~ 125 (560)
...+.|||...+++ |+++.||+|+|. .+.....+++|.||.+...- |.+|.. ++....|+||+....+
T Consensus 50 Pt~vvFNG~v~altg~~~l~akvGErV~i~-~~~~n~~s~fHliG~hFD~V-~~~G~~~~~p~~~~qTv~VppG~a~~ve 127 (173)
T d2bw4a2 50 PTHIVFNGAVGALTGDHALTAAVGERVLVV-HSQANRDTRPHLIGGHGDYV-WATGKFRNPPDLDQETWLIPGGTAGAAF 127 (173)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTCEEEEE-EEESSSCBCEEEETCCEEEE-ETTCCTTSCCEEEESCCCBCTTEEEEEE
T ss_pred CCEEEECCCccccccccCcccccCCeEEEE-ecCCCCCccceeccceeEEE-CCCCcccCCCcCCceeEEccCCccEEEE
Confidence 35689999998886 999999999884 44557789999999886533 455532 1223568999999999
Q ss_pred EEEcccCcceeEeecccc--ccccceEeEEEeCCCC
Q 008592 126 FTVTGQRGTLFWHAHISW--LRATLYGPIIILPKQQ 159 (560)
Q Consensus 126 ~~~~~~~Gt~wYH~H~~~--~~~Gl~G~liV~~~~~ 159 (560)
|+. +++|+|-||||... ...|+.|.|.|+++..
T Consensus 128 ~~f-~~PG~y~~v~H~l~ea~~~G~~g~l~V~G~~~ 162 (173)
T d2bw4a2 128 YTF-RQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 162 (173)
T ss_dssp EEC-CSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEe-cCceEEEEEechHHHHHhCCCEEEEEEcCCCC
Confidence 997 78999999999633 3589999999998754
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.81 E-value=1.2e-08 Score=86.40 Aligned_cols=97 Identities=21% Similarity=0.349 Sum_probs=70.3
Q ss_pred cEEEEecCCCEEEEEEeeCCcC--ccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEE
Q 008592 435 TKVVVLPFNASVEVVMQDTSII--VAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRF 512 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~--~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf 512 (560)
.++++++.|+++++.+.|.... ....+.+|+||-+. .+... .+....-....|+||+..+.+|
T Consensus 33 GP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~----~~~~~-----------~dgv~~~t~~~I~PG~~~~Y~~ 97 (136)
T d1v10a1 33 APLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQ----AGTTE-----------MDGPAFVNQCPIIPNESFVYDF 97 (136)
T ss_dssp CCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCC----TTCGG-----------GSCCBTTTBCCBCTTEEEEEEE
T ss_pred CCeEEEECCcEEEEEEEeCCCCcccCcceeEEeccccc----ccccc-----------cCCCCccccceECCCCeEEEEE
Confidence 3458999999999999996321 12467799999542 01000 0111111234589999999999
Q ss_pred Ee-cCceeeEEEeechhhhhcccEEEEEEcCCCCC
Q 008592 513 LA-DNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGP 546 (560)
Q Consensus 513 ~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~ 546 (560)
++ +.+|.|.||||...|...||...+.|++++++
T Consensus 98 ~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~dp 132 (136)
T d1v10a1 98 VVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDP 132 (136)
T ss_dssp ECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCT
T ss_pred ECCCCccceEEecCchhHHhCCCEEEEEECCCccc
Confidence 98 56999999999999999999999999887653
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.71 E-value=2.4e-08 Score=85.48 Aligned_cols=91 Identities=12% Similarity=0.106 Sum_probs=63.8
Q ss_pred CCCcEEEEecCCEEEEEEEeCC--CcCeeEEecCcccC-----------C-CcCCCCCCCc-----CccccCCCCeEEEE
Q 008592 65 FPGPRIIAREGDRLLIRVINNV--KYNVTIHWHGVRQL-----------R-SGWADGPAYV-----TQCPIQTGQSYVYN 125 (560)
Q Consensus 65 ~pGP~i~~~~Gd~v~v~~~N~l--~~~~~iH~HG~~~~-----------~-~~~~DGv~~~-----tq~~i~pG~~~~Y~ 125 (560)
|--.+|+|++||+|++.+.|.. ..+++++....... + ...+.-.|.. .-..+.||++.+++
T Consensus 29 F~p~~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i~ 108 (139)
T d1qhqa_ 29 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 108 (139)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EcCCeEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccccccCCcceEEEE
Confidence 3346999999999999999976 45666655432110 0 0001111111 11347899999999
Q ss_pred EEEcccCcceeEeecccccc-ccceEeEEEeC
Q 008592 126 FTVTGQRGTLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 126 ~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
|+. .++|+||||||.-+.. .||.|.|+|.|
T Consensus 109 f~~-~~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 109 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred Eec-CCCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 998 5899999999987776 89999999975
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.51 E-value=2.3e-07 Score=80.40 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=80.8
Q ss_pred EEEEEEEEEEEeeecCceeEEEEECCCCCC--cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcC-----------
Q 008592 38 RHYKFHIKMQNITRLCQTKSIVTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGW----------- 104 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~----------- 104 (560)
+..+|++.. ..+-..+.+|++||+.-. .+..++.|++.+.+|.|....++.+|.||.+.....-
T Consensus 12 ~~r~~~l~~---~~~~~g~~~~~ing~~~~~~~~~~~~~G~~e~W~i~N~~~~~HP~HiHg~~F~Vl~~~~~~~~~~~~~ 88 (154)
T d1gska3 12 NIRTLKLAG---TQDEYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQES 88 (154)
T ss_dssp EEEEEEEEE---EECTTSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHH
T ss_pred eEEEEEEcc---cccccCCceEEECCcCcCCCcccccCCCCEEEEEEEeCCCCCCCEEECCceEEEEEecCCCccccccc
Confidence 444444433 234345678999998543 3567899999999999999999999999975532110
Q ss_pred ----CCCC--C------C-cCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEe
Q 008592 105 ----ADGP--A------Y-VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIIL 155 (560)
Q Consensus 105 ----~DGv--~------~-~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 155 (560)
.++. + + -.-..|.||++.+.+|+.++.+|.|.||||..... .||.+.+-|-
T Consensus 89 ~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG~w~~HCHil~Hed~GMM~~~~V~ 153 (154)
T d1gska3 89 GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHILEHEDYDMMRPMDIT 153 (154)
T ss_dssp CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEB
T ss_pred ccccccCCCcCCCcccCcccccEEeCCCCEEEEEEEeCCCCcceEEecCcchHhhCcCceEEEEe
Confidence 0000 0 0 00124789999999998668899999999987665 7999988774
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.51 E-value=2.5e-07 Score=77.80 Aligned_cols=78 Identities=15% Similarity=0.240 Sum_probs=60.4
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.|.|.+.|.. ...|.+|-|+-. + ..-...+.||....+.|+++.
T Consensus 53 ~i~V~~Gd~V~~~ltN~d---~~~~v~H~~~i~----~---------------------~~~~~~~~PG~~~~~~F~a~~ 104 (132)
T d1fwxa1 53 SFTVKEGDEVTVIVTNLD---EIDDLTHGFTMG----N---------------------YGVAMEIGPQMTSSVTFVAAN 104 (132)
T ss_dssp EEEEETTCEEEEEEEECC---CSTTCCEEEEET----T---------------------TTEEEEECTTCEEEEEEECCS
T ss_pred EEEEcCCCEEEEEEEcCC---CCccceEeechh----h---------------------hccccccCCCEEEEEEEeCCC
Confidence 478999999999999964 345655554221 0 111345789999999999999
Q ss_pred ceeeEEEeechhhh-hcccEEEEEEcC
Q 008592 517 PGVWFMHCHLEVHT-SWGLKMAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~-d~GMm~~~~V~~ 542 (560)
||.|.||||..-|. +.||...+.|+|
T Consensus 105 ~G~y~~~C~~~cg~~H~~M~G~iiVeP 131 (132)
T d1fwxa1 105 PGVYWYYCQWFCHALHMEMRGRMLVEP 131 (132)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CeEEEEECccccCcchhcCEEEEEEEc
Confidence 99999999998776 489999999865
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.50 E-value=2.4e-07 Score=82.05 Aligned_cols=99 Identities=11% Similarity=0.122 Sum_probs=68.8
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+++.++.|++|.+++.|.. ..++.||.||..+-....+....+. ..+.-.-...|+||++.+.+|.+
T Consensus 59 GP~Ira~~GD~i~V~f~N~~---~~~~siH~HG~~~~~~~~~~~~~d~---------~~~~~~~~~~V~PGet~tY~w~v 126 (180)
T d1sdda1 59 GPTLYAEVGDIMKVHFKNKA---HKPLSIHAQGIKYSKFSEGASYSDH---------TLPMEKMDDAVAPGQEYTYEWII 126 (180)
T ss_dssp CCCEEEETTCEEEEEEEECS---SSCBCCEEESSCCCTTTSCCCSCCC---------CCHHHHTTTCBCTTCEEEEEEEC
T ss_pred CCeEEEECCcEEeeEEEeCC---CCCcccccccccccccccccccccc---------CCCCCccccccCCCCEEEEEEEe
Confidence 45799999999999999964 4789999999875221111000000 00000111248999999999998
Q ss_pred c----------CceeeEEEeech--hhhhcccEEEEEEcCCCC
Q 008592 515 D----------NPGVWFMHCHLE--VHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 515 d----------npG~w~~HCHil--~H~d~GMm~~~~V~~~~~ 545 (560)
. +.|.|+||||+. .|...||+..+.|.+...
T Consensus 127 ~~~~gp~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~g~ 169 (180)
T d1sdda1 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGT 169 (180)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTC
T ss_pred CCcccCccCCCCCEEEEEecCCCcHHHhhCCceEEEEEccCCC
Confidence 4 248999999974 488899999999977644
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.48 E-value=3e-07 Score=79.94 Aligned_cols=100 Identities=19% Similarity=0.232 Sum_probs=78.9
Q ss_pred EEEEECCCCCC----cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC------CcCccccCCCCeEEEEE
Q 008592 57 SIVTVNGQFPG----PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA------YVTQCPIQTGQSYVYNF 126 (560)
Q Consensus 57 ~~~~~ng~~pG----P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~tq~~i~pG~~~~Y~~ 126 (560)
.-..|||..-+ ..|+++.||+|+| +.+.....++.|.||.+...- |-+|.. ++....|+||+.-.-+|
T Consensus 51 ~~vvFNG~~galt~~~~l~akvGe~Vri-~~~~~N~~ssfHlIG~hfD~V-~~~G~~~n~p~~~~qT~~V~pG~~~~v~~ 128 (177)
T d1oe1a2 51 SHIVFNGKVGALTGANALTAKVGETVLL-IHSQANRDTRPHLIGGHGDWV-WETGKFANPPQRDLETWFIRGGSAGAALY 128 (177)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEE-EEEESSSCBCEEETTCCEEEE-ETTCCTTSCCEEEESBCCBCTTEEEEEEE
T ss_pred cEEEECCccccccCCCCcccccCCeEEE-EecCCCCCccceecccccceE-ccCCeeCCCCCcCceeEEecCCccEEEEE
Confidence 46899997533 3699999999998 567778999999999877532 456632 22345689999999999
Q ss_pred EEcccCcceeEeecccc--ccccceEeEEEeCCCC
Q 008592 127 TVTGQRGTLFWHAHISW--LRATLYGPIIILPKQQ 159 (560)
Q Consensus 127 ~~~~~~Gt~wYH~H~~~--~~~Gl~G~liV~~~~~ 159 (560)
+. +++|+|-||+|... ...|+.|.|.|+++.+
T Consensus 129 tf-~~PG~Y~fV~H~L~ea~~~Ga~g~l~V~G~~~ 162 (177)
T d1oe1a2 129 TF-KQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 162 (177)
T ss_dssp EC-CSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred Ee-cCceEEEEEecHHHHHHhcCCeEEEEecCCCC
Confidence 97 78999999999643 3589999999997764
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.46 E-value=4.1e-08 Score=87.20 Aligned_cols=98 Identities=14% Similarity=0.118 Sum_probs=69.4
Q ss_pred eEEEEECCCCCC---cEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCC-c------CccccCCCCeE-E
Q 008592 56 KSIVTVNGQFPG---PRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAY-V------TQCPIQTGQSY-V 123 (560)
Q Consensus 56 ~~~~~~ng~~pG---P~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-~------tq~~i~pG~~~-~ 123 (560)
..+|+|||+.-. |.|.++.|+.++++|.|... ..+.+|+||....... .+|.+. . .-..|+||++. .
T Consensus 70 ~~~~tING~~f~~~~p~~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~-~~g~~~~~~~~~~kDTv~v~~~~~~v~ 148 (181)
T d1kv7a3 70 HHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILS-ENGKPPAAHRAGWKDTVKVEGNVSEVL 148 (181)
T ss_dssp GGCEEETTBCCCTTCCSEECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEE-BTTBCCCGGGSSSBSEEEESSSEEEEE
T ss_pred ccceeECCEecCCCCCceEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEe-cccCCccccCCcceeEEEeCCCceEEE
Confidence 357999999643 67999999999999999885 5899999998754332 233221 0 11236676543 3
Q ss_pred EEEEEc-ccCcceeEeecccccc-ccceEeEEE
Q 008592 124 YNFTVT-GQRGTLFWHAHISWLR-ATLYGPIII 154 (560)
Q Consensus 124 Y~~~~~-~~~Gt~wYH~H~~~~~-~Gl~G~liV 154 (560)
-+|... ...|.|.||||..... .||.+.|.|
T Consensus 149 v~f~~~~~~~G~w~fHCHil~H~d~GMm~~f~V 181 (181)
T d1kv7a3 149 VKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 181 (181)
T ss_dssp ECCCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred EEEEeeCCCCCeEEEeCChHHHHhCCCCEEEEC
Confidence 455432 4569999999987765 799998875
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.32 E-value=1.5e-06 Score=72.71 Aligned_cols=78 Identities=14% Similarity=0.259 Sum_probs=61.7
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.|.+.+.|.....+..|.|++.+..+. ..+.||....+.|++++
T Consensus 52 ~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~v~----------------------------~~~~PG~t~~~~f~~~~ 103 (131)
T d1qnia1 52 DFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHGVS----------------------------MEISPQQTASVTFTAGK 103 (131)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECCS
T ss_pred eEEecCCCEEEEEEEccCCCCcceEEEEEeccCcc----------------------------cccCCCceEEEEEEcCC
Confidence 47899999999999985422345677777665542 23678889999999999
Q ss_pred ceeeEEEeechhhh-hcccEEEEEEcC
Q 008592 517 PGVWFMHCHLEVHT-SWGLKMAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~-d~GMm~~~~V~~ 542 (560)
||.|.+||+..-|. +.+|...+.|++
T Consensus 104 ~G~y~~~C~~~cg~~H~~M~g~i~Vep 130 (131)
T d1qnia1 104 PGVYWYYCNWFCHALHMEMVGRMLVEA 130 (131)
T ss_dssp SEEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred CEEEEEECccccCcchhcCeeEEEEEe
Confidence 99999999987665 478999999875
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.28 E-value=1.2e-06 Score=79.17 Aligned_cols=103 Identities=11% Similarity=0.090 Sum_probs=68.3
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+++.++.|++|++++.|.. ..++.||.||..+.--..+ ..+..... ....+.......|.||+..+.+|.+
T Consensus 85 GP~Ira~~GD~v~V~~~N~~---~~p~siH~HG~~~~~~~dg-~~~~~~~~----~~~~~~~~~~~~V~PGet~tY~w~v 156 (207)
T d2j5wa3 85 GPVIWAEVGDTIRVTFHNKG---AYPLSIEPIGVRFNKNNEG-TYYSPNYN----PQSRSVPPSASHVAPTETFTYEWTV 156 (207)
T ss_dssp CCCEEEETTEEEEEEEEECS---SSCBCCEEESSBCCGGGCS-BCCBCC-----------CCCCSSCBCTTCEEEEEEEC
T ss_pred CceEEEECCCEEEEEEEECC---CCCccccccccccCccccc-ccccCCCC----cccCCcCcccceecCCCEEEEEEEe
Confidence 45689999999999999964 4789999999986321111 00000000 0001111222448999999999998
Q ss_pred cCce----------eeEEEeechh--hhhcccEEEEEEcCCCC
Q 008592 515 DNPG----------VWFMHCHLEV--HTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 515 dnpG----------~w~~HCHil~--H~d~GMm~~~~V~~~~~ 545 (560)
...+ .|+||||+.. |...||...+.|.....
T Consensus 157 ~~~~gP~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g~ 199 (207)
T d2j5wa3 157 PKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGS 199 (207)
T ss_dssp CGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTC
T ss_pred cCCCCCccCCCCceeEEEccCCChhHhhccCceEEEEEccCCC
Confidence 5443 7999999854 55789999999976543
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.27 E-value=1.1e-06 Score=79.03 Aligned_cols=88 Identities=22% Similarity=0.242 Sum_probs=63.0
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCc-------cccCCC-CeEEEEEEEcccCcceeEe
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQ-------CPIQTG-QSYVYNFTVTGQRGTLFWH 138 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq-------~~i~pG-~~~~Y~~~~~~~~Gt~wYH 138 (560)
+..+.+..++.++|++.|. ..+.+|+||.+.......++...... ..|.|| ++..++|.+ +.+|.|.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~~--~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~a-dnpG~w~~H 147 (190)
T d1v10a3 71 GAVISLPANQVIEISIPGG--GNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVT-DNPGPWFLH 147 (190)
T ss_dssp TTEEEECTTCEEEEEEECC--BSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEEC-CSCEEEEEE
T ss_pred ceeEEccCccEEEEEeccC--ccccccccCceEEEEEcCCCcccccccCcccCEEEeCCCeEEEEEEEEc-CCCeeEEEe
Confidence 3468999999999988884 57889999986644331222211111 226675 467799997 789999999
Q ss_pred ecccccc-ccceEeEEEeCC
Q 008592 139 AHISWLR-ATLYGPIIILPK 157 (560)
Q Consensus 139 ~H~~~~~-~Gl~G~liV~~~ 157 (560)
||..... .||...|++.++
T Consensus 148 CHi~~H~~~GM~~~~~~~~~ 167 (190)
T d1v10a3 148 CHIDWHLEAGLAVVFAEDIP 167 (190)
T ss_dssp ESCHHHHTTTCEEEEEESGG
T ss_pred cCchhhhhCCCcEEEEECCC
Confidence 9987655 799999987653
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.24 E-value=6.7e-07 Score=71.16 Aligned_cols=81 Identities=16% Similarity=0.210 Sum_probs=53.0
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
.+|++++||+| ++.|.....+.++.+..........++... .+....+|.++++.| ..+|+|||+|.. ...+|
T Consensus 18 ~~i~v~~GdtV--~f~n~~~~~h~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~tf---~~~G~y~y~C~~-H~~~G 90 (98)
T d2plta_ 18 KTLTIKSGETV--NFVNNAGFPHNIVFDEDAIPSGVNADAISR-DDYLNAPGETYSVKL---TAAGEYGYYCEP-HQGAG 90 (98)
T ss_dssp SEEEECTTCEE--EEEECSSCCEEEEECGGGSCTTCCHHHHCE-EEEECSTTCEEEEEC---CSCEEEEEECGG-GGGGT
T ss_pred CEEEECCCCEE--EEEECCCCceeEEEecCCccccccCCcccc-cccccCCCceEEEEe---cCCceEEEEeCc-CCCCC
Confidence 69999999985 567887777777776544332211111111 122345666655554 579999999975 33479
Q ss_pred ceEeEEEe
Q 008592 148 LYGPIIIL 155 (560)
Q Consensus 148 l~G~liV~ 155 (560)
|.|.|+|+
T Consensus 91 M~G~I~Ve 98 (98)
T d2plta_ 91 MVGKIIVQ 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999996
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=98.18 E-value=6.5e-07 Score=71.19 Aligned_cols=81 Identities=15% Similarity=0.155 Sum_probs=52.4
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
.+.|++++||+|+ +.|....++++..............+ ......+.+|++++|.| +.+|+|+|+|.. ....
T Consensus 18 P~~i~v~~GdtV~--~~n~~~~~H~~~~~~~~~~~~~~~~~--~~~~~~~~~g~t~~~tf---~~~G~y~Y~C~~-H~~~ 89 (98)
T d1pcsa_ 18 PSTVTIKAGEEVK--WVNNKLSPHNIVFDADGVPADTAAKL--SHKGLLFAAGESFTSTF---TEPGTYTYYCEP-HRGA 89 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECCSSSCHHHHHHH--CEEEEECSTTCEEEEEC---CSCEEEEEECGG-GTTT
T ss_pred CCEEEECCCCEEE--EeECCCCccceEEeccccCCCccccc--cccccccCCCcEEEEec---cCCceEEEEecc-CCCC
Confidence 3699999999855 55776666666554321110000000 11123468899888887 469999999965 3347
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
||.|.|+|+
T Consensus 90 gM~G~I~Ve 98 (98)
T d1pcsa_ 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999995
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=98.17 E-value=1.2e-06 Score=79.89 Aligned_cols=88 Identities=16% Similarity=0.056 Sum_probs=65.6
Q ss_pred EEEEecCCEEEEEEEeCC------CcCeeEEecCcccCCCcCCCCCCC--------------cCccccCCCCeEEEEEEE
Q 008592 69 RIIAREGDRLLIRVINNV------KYNVTIHWHGVRQLRSGWADGPAY--------------VTQCPIQTGQSYVYNFTV 128 (560)
Q Consensus 69 ~i~~~~Gd~v~v~~~N~l------~~~~~iH~HG~~~~~~~~~DGv~~--------------~tq~~i~pG~~~~Y~~~~ 128 (560)
.++++.|+.|+|.+.|.. ...+.+|+||.+.......+|... ..-..+.||+..+.+|.+
T Consensus 80 v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~a 159 (214)
T d1aoza3 80 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 159 (214)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred eEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEec
Confidence 589999999999999953 457999999976532211222110 011347899999999998
Q ss_pred cccCcceeEeecccccc-ccceEeEEEeCC
Q 008592 129 TGQRGTLFWHAHISWLR-ATLYGPIIILPK 157 (560)
Q Consensus 129 ~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~ 157 (560)
+.+|.|.||||..... .||...|+|.+.
T Consensus 160 -dnpG~w~~HCH~~~H~~~GM~~~~~v~~~ 188 (214)
T d1aoza3 160 -DNPGVWAFHCHIEPHLHMGMGVVFAEGVE 188 (214)
T ss_dssp -CSCEEEEEEESSHHHHHTTCEEEEEECGG
T ss_pred -CCCeeEEEEECcHHHHhCcCcEEEEEccc
Confidence 7899999999986655 899888887654
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.16 E-value=4.9e-06 Score=74.95 Aligned_cols=88 Identities=18% Similarity=0.156 Sum_probs=64.7
Q ss_pred CcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCC-c-------Ccccc-CCCCeEEEEEEEcccCccee
Q 008592 67 GPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAY-V-------TQCPI-QTGQSYVYNFTVTGQRGTLF 136 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-~-------tq~~i-~pG~~~~Y~~~~~~~~Gt~w 136 (560)
+.+|++..|+.+++.+.|... ..+.+|+||....... .+|.+. . .-..| .+|++...+|.+ +.+|.|.
T Consensus 69 ~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~vl~-~~g~~~~~~~~~~~rDtv~v~~~G~~~~ir~~a-dnpG~w~ 146 (200)
T d1hfua3 69 GSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVR-SAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVT-DNPGPWF 146 (200)
T ss_dssp TSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEE-CTTCCCCCCSSBCEESEEECCSTTCEEEEEEEC-CSCEEEE
T ss_pred CceEEecCCcceEEEEeeccccccCceeecCCcEEEEe-ccCCCCCccccCcccceEEeCCCCEEEEEEEEC-CCCeeeE
Confidence 457999999999999988874 6899999997654322 222211 0 01225 467888899997 7899999
Q ss_pred Eeecccccc-ccceEeEEEeC
Q 008592 137 WHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 137 YH~H~~~~~-~Gl~G~liV~~ 156 (560)
||||..... .||...|++.+
T Consensus 147 ~HCHi~~H~~~GM~~~~~~~~ 167 (200)
T d1hfua3 147 FHCHIEFHLMNGLAIVFAEDM 167 (200)
T ss_dssp EEESSHHHHHTTCEEEEEECH
T ss_pred EEeCCChHHhCCCcEEEEEcC
Confidence 999987655 89987777764
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=98.03 E-value=7.5e-06 Score=65.69 Aligned_cols=77 Identities=19% Similarity=0.328 Sum_probs=55.1
Q ss_pred CCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccc
Q 008592 64 QFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW 143 (560)
Q Consensus 64 ~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~ 143 (560)
+|-.++|.+++||+|+ +.|....++++++.... +|........+.+|++++|.| +++|+|.|+|-.|
T Consensus 29 ~F~P~~i~V~~GdtV~--f~N~d~~~H~v~~~~~~-------~~~~~~~~~~~~~g~~~~~tf---~~pG~y~y~C~~H- 95 (105)
T d2ov0a1 29 KYETPELHVKVGDTVT--WINREAMPHNVHFVAGV-------LGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPH- 95 (105)
T ss_dssp EESSSEEEECTTCEEE--EEECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC-
T ss_pred EEeCCEEEECCCCEEE--EEECCCCceeEEEeccc-------CCcccccccccCCCceEEEEe---cCCeEEEEEecCC-
Confidence 3444799999999865 57887777777654321 111122334468899988888 4689999999664
Q ss_pred ccccceEeEEEe
Q 008592 144 LRATLYGPIIIL 155 (560)
Q Consensus 144 ~~~Gl~G~liV~ 155 (560)
.||.|.|+|+
T Consensus 96 --~~M~G~I~Ve 105 (105)
T d2ov0a1 96 --PFMRGKVVVE 105 (105)
T ss_dssp --TTCEEEEEEC
T ss_pred --CCCEEEEEEC
Confidence 4899999985
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=98.03 E-value=7.7e-07 Score=71.78 Aligned_cols=86 Identities=17% Similarity=0.155 Sum_probs=58.8
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCC--CCcCccccCCCCeEEEEEEEcccCcceeEeeccccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGP--AYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWL 144 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv--~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~ 144 (560)
...|+++.||+|+ +.|....+++.+.......... .++. .......+.||+++.+.|..+..+|+|||+|.. ..
T Consensus 18 P~~l~v~~GdtV~--f~n~~~~~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~y~y~C~~-H~ 93 (105)
T d2q5ba1 18 PANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGAS-KELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAP-HR 93 (105)
T ss_dssp SSEEEECTTEEEE--EEECSSCCEEEEECGGGSGGGC-HHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECST-TG
T ss_pred CCEEEECCCCEEE--EEECCCCCceeEeecCcccccc-cccCCccccccccccCCceEEEEEEeccCCceEEEEeCC-CC
Confidence 3689999999865 6787766666666543321110 0000 011234578999999999877789999999986 33
Q ss_pred cccceEeEEEeC
Q 008592 145 RATLYGPIIILP 156 (560)
Q Consensus 145 ~~Gl~G~liV~~ 156 (560)
.+||.|.|+|++
T Consensus 94 ~~GM~G~I~Veg 105 (105)
T d2q5ba1 94 GAGMVGKITVEG 105 (105)
T ss_dssp GGTCEEEEEECC
T ss_pred CCCCEEEEEEcC
Confidence 479999999974
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.02 E-value=1.2e-05 Score=72.40 Aligned_cols=89 Identities=17% Similarity=0.129 Sum_probs=64.7
Q ss_pred CcEEEEecCCEEEEEEEeCC---CcCeeEEecCcccCCCcCCCCCCCcCc----------cccCCCCeEEEEEEEcccCc
Q 008592 67 GPRIIAREGDRLLIRVINNV---KYNVTIHWHGVRQLRSGWADGPAYVTQ----------CPIQTGQSYVYNFTVTGQRG 133 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l---~~~~~iH~HG~~~~~~~~~DGv~~~tq----------~~i~pG~~~~Y~~~~~~~~G 133 (560)
|.++.+..++.++|.+.|.. ...+.+|+||.+.....-.+|...... ..++||+...++|.+ +.+|
T Consensus 69 ~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~~~~~~g~~~~irf~a-dnpG 147 (199)
T d1gyca3 69 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQT-DNPG 147 (199)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEEC-CSCE
T ss_pred CceEEeccCceeEEEeecccccCCCceeeeecCCcEEEEeecCCCccCccCcccccceeeeccCCCcEEEEEEEC-CCCe
Confidence 45678999999999988764 457999999987653322333322111 124799999999997 7899
Q ss_pred ceeEeecccccc-ccceEeEEEeC
Q 008592 134 TLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 134 t~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
.|.||||..... .||...|++..
T Consensus 148 ~w~~HCHi~~H~~~GM~~~~~~~~ 171 (199)
T d1gyca3 148 PWFLHCHIDFHLEAGFAIVFAEDV 171 (199)
T ss_dssp EEEEEESSHHHHHTTCEEEEEETH
T ss_pred eEEEEcCchhhHhccCcEEEEEcC
Confidence 999999987655 79987765543
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.00 E-value=1.1e-05 Score=70.47 Aligned_cols=81 Identities=14% Similarity=0.175 Sum_probs=63.2
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+++.++.|++|.+++.|.. ..++.||.||-.. . ... +. .|.||+..+.+|.+
T Consensus 85 GP~IraevGD~i~V~f~N~a---~~p~SiH~HGv~~-----~-----~~~-------~~-------~v~PGet~tY~w~v 137 (179)
T d2j5wa4 85 GPQLHADVGDKVKIIFKNMA---TRPYSIHAHGVQT-----E-----SST-------VT-------PTLPGETLTYVWKI 137 (179)
T ss_dssp CCCEEEETTEEEEEEEEECS---SSCBCCEESSCBC-----S-----CSC-------CC-------CBCTTCEEEEEEEC
T ss_pred CCeEEEECCCEEEEEEEeCC---CCCEeEeeccccC-----C-----CCC-------CC-------cccCCccEEEEEEe
Confidence 45689999999999999964 5799999999863 0 000 01 27899999999987
Q ss_pred cCc----------eeeEEEeech--hhhhcccEEEEEEcC
Q 008592 515 DNP----------GVWFMHCHLE--VHTSWGLKMAWIVND 542 (560)
Q Consensus 515 dnp----------G~w~~HCHil--~H~d~GMm~~~~V~~ 542 (560)
... +.|.||||+. .|...||.+.+.|..
T Consensus 138 ~~~~gp~~~d~~c~t~~YHShv~~~~d~~sGL~GplIVc~ 177 (179)
T d2j5wa4 138 PERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCR 177 (179)
T ss_dssp CGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEEC
T ss_pred cCccCCccCCCCceeEEEecCCCcHHHhhCCCeEEEEEEe
Confidence 433 3899999995 478899999999863
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=97.99 E-value=1.2e-06 Score=70.17 Aligned_cols=82 Identities=10% Similarity=0.016 Sum_probs=45.9
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcC----CCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGW----ADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW 143 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~----~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~ 143 (560)
++|+++.||+|+ ++|....+++..+--........ ..+..........+|+++++.| .++|+|||+|.. +
T Consensus 17 ~~l~v~~GdtV~--f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---~~~G~y~Y~C~~-H 90 (102)
T d1kdja_ 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCTP-H 90 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECST-T
T ss_pred CEEEECCCCEEE--EEECCCCceeEEEecCCCCCcccccccccCcccccccccCCccEEEEee---CCCceEEEEecC-C
Confidence 699999999865 56766554443332100000000 0000000112234555555544 579999999986 3
Q ss_pred ccccceEeEEEe
Q 008592 144 LRATLYGPIIIL 155 (560)
Q Consensus 144 ~~~Gl~G~liV~ 155 (560)
..+||.|.|+|+
T Consensus 91 ~~~GM~G~I~Ve 102 (102)
T d1kdja_ 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 348999999996
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=97.92 E-value=7.4e-06 Score=72.65 Aligned_cols=98 Identities=17% Similarity=0.102 Sum_probs=63.1
Q ss_pred cEEEEecCCCEEEEEEeeCCcC-------------------ccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCC
Q 008592 435 TKVVVLPFNASVEVVMQDTSII-------------------VAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPA 495 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~-------------------~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~ 495 (560)
.++++++.|+.+++.+.|.-.. ......+|+||-+.- ....|. . ....
T Consensus 56 GPtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~--~~~DG~--------~---~~~~ 122 (181)
T d1gska1 56 GPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGY--------P---EAWF 122 (181)
T ss_dssp CCBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCCC--GGGSCC--------T---TSCB
T ss_pred CCeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeeccccC--CccCCC--------c---cccc
Confidence 4568999999999999995210 012356999997531 111110 0 0011
Q ss_pred ccce-eEeCCCCEEEEEEEecCc-eeeEEEeec----hhhhhcccEEEEEEcCCCC
Q 008592 496 ERNT-VGVPSGGWVAIRFLADNP-GVWFMHCHL----EVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 496 ~rDT-v~vpp~g~v~irf~adnp-G~w~~HCHi----l~H~d~GMm~~~~V~~~~~ 545 (560)
..+. ...+.+.+.+.+|.++.+ |.|.||||. ..|...||...+.|+++++
T Consensus 123 ~~~~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~~ 178 (181)
T d1gska1 123 SKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 178 (181)
T ss_dssp CGGGSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred ccCcccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCccc
Confidence 1111 123455667789988765 899999997 4689999999999987654
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=97.88 E-value=1.5e-05 Score=61.99 Aligned_cols=74 Identities=20% Similarity=0.293 Sum_probs=53.0
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
.+.|++++||+|+ +.|.....+++...+..... +.+ ..+.||++++|.| ..+|+|.|+|..| ...
T Consensus 18 P~~i~I~~GdtV~--f~n~d~~~h~~~~~~~~~~~--~~~-------~~~~~g~~~~~tF---~~~G~y~Y~C~~H-~~~ 82 (91)
T d1bxua_ 18 PSTIEIQAGDTVQ--WVNNKLAPHNVVVEGQPELS--HKD-------LAFSPGETFEATF---SEPGTYTYYCEPH-RGA 82 (91)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEETTCGGGC--EEE-------EECSTTCEEEEEC---CSCEEEEEECTTT-GGG
T ss_pred CCEEEECCCCEEE--EEECCcCCceEEeccccccc--ccc-------cccCCCCCEEEEe---ccCceEEEEeCCC-CCC
Confidence 3799999999865 67888777766655542211 011 2457899988877 4699999999652 236
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
||.|.|+|+
T Consensus 83 gM~G~I~Ve 91 (91)
T d1bxua_ 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999995
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=97.87 E-value=1.1e-05 Score=66.70 Aligned_cols=76 Identities=16% Similarity=0.204 Sum_probs=49.3
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
++|++++||+|+. .|.....++.-..+. ..++.. .....+|++++|.| +.+|+|.|+|.. ....|
T Consensus 21 ~~ltV~~GDTV~f--~n~d~~~h~~~~~~~------~~~~~~---~~~~~~~~~~~~tF---~~~G~Y~Y~C~p-H~~~G 85 (123)
T d1pmya_ 21 ALVRLKPGDSIKF--LPTDKGHNVETIKGM------APDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAP-HYMMG 85 (123)
T ss_dssp SEEEECTTCEEEE--ECSSSSCCCEECTTS------SCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECST-TTTTT
T ss_pred CEEEECCCCEEEE--eeCCCCccccccccc------Cccccc---cccccccccccccc---CCCceEEEEecc-CCCCC
Confidence 8999999999665 555433222212221 122221 13456788888777 468999999976 33389
Q ss_pred ceEeEEEeCCC
Q 008592 148 LYGPIIILPKQ 158 (560)
Q Consensus 148 l~G~liV~~~~ 158 (560)
|.|.|+|.++.
T Consensus 86 M~G~I~Vgd~~ 96 (123)
T d1pmya_ 86 MVALVVVGDKR 96 (123)
T ss_dssp CEEEEEESSCC
T ss_pred CEEEEEECCCC
Confidence 99999997654
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=97.86 E-value=1.1e-05 Score=63.90 Aligned_cols=82 Identities=11% Similarity=0.096 Sum_probs=51.0
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCC-CCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWA-DGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~-DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
.+|++++||+| +++|.....+++.+........... .+-..-......|++++++.| ..+|+|||+|-. ....
T Consensus 17 ~~i~v~~GdtV--~f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tf---~~~G~y~y~C~~-H~~~ 90 (99)
T d1bypa_ 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP-HAGA 90 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG-GTTT
T ss_pred CEEEECCCCEE--EEEECCCCceeEEEecCCCCCccccccCcccccccccCCCceEEEEe---cCCceEEEEECc-CCCC
Confidence 68999999985 5568776666655543322111000 000011123356788777777 468999999975 2337
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
||.|.|+|.
T Consensus 91 GM~G~I~V~ 99 (99)
T d1bypa_ 91 GMVGKVTVN 99 (99)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999983
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=97.86 E-value=2.2e-05 Score=62.12 Aligned_cols=82 Identities=10% Similarity=0.120 Sum_probs=52.4
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCc-CCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSG-WADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~-~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
.+|++++||+|+ +.|....++++.+......... ..++--.-......||+++++.| .++|+|.|+|-. ...+
T Consensus 17 ~~iti~~GdtV~--f~n~~~~~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~tF---~~~G~y~Y~C~p-H~~~ 90 (99)
T d1plca_ 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP-HQGA 90 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG-GTTT
T ss_pred CEEEECCCCEEE--EEECCCCCccEEEccCcCCCccccccCcccccccccCCCceEEEec---CCCceEEEEeCC-CcCC
Confidence 689999999865 5787766677665432221100 00000011223457999888877 469999999953 3348
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
||.|.|+|.
T Consensus 91 GM~G~I~V~ 99 (99)
T d1plca_ 91 GMVGKVTVN 99 (99)
T ss_dssp TCEEEEEEC
T ss_pred CcEEEEEEC
Confidence 999999983
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=97.81 E-value=5.3e-05 Score=60.65 Aligned_cols=77 Identities=12% Similarity=0.245 Sum_probs=53.2
Q ss_pred CCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccc
Q 008592 64 QFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW 143 (560)
Q Consensus 64 ~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~ 143 (560)
.|--+.|.+++||+| ++.|....++++...........+.. -.+.+|++|+|.| +++|+|.|+|-.|
T Consensus 30 ~F~P~~i~V~~GdtV--~f~N~d~~~H~v~~~~~~~~~~~f~s-------~~~~~~~~~~~tf---~~~G~y~y~C~~H- 96 (106)
T d1id2a_ 30 KYLTPEVTIKAGETV--YWVNGEVMPHNVAFKKGIVGEDAFRG-------EMMTKDQAYAITF---NEAGSYDYFCTPH- 96 (106)
T ss_dssp EESSSEEEECTTCEE--EEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEE---CSCEEEEEECSSC-
T ss_pred EEeCCEEEECCCCEE--EEEECCCCceeEEeccccCCcccccc-------cccCCCceEEEec---CCCeEEEEEccCC-
Confidence 454479999999985 56788766666654432222111111 2357888888877 4799999999776
Q ss_pred ccccceEeEEEe
Q 008592 144 LRATLYGPIIIL 155 (560)
Q Consensus 144 ~~~Gl~G~liV~ 155 (560)
.||.|.|+|+
T Consensus 97 --~~M~G~I~Ve 106 (106)
T d1id2a_ 97 --PFMRGKVIVE 106 (106)
T ss_dssp --TTCEEEEEEC
T ss_pred --CCCEEEEEEC
Confidence 4999999985
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=97.77 E-value=2.1e-05 Score=62.12 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=50.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
.+|++++||+|+ +.|.....++.....-........++.. .......+++++++.| ..+|+|||+|-.| -.+|
T Consensus 18 ~~i~i~~GdtV~--f~n~~~~~h~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~f---~~~G~y~y~C~~H-~~~G 90 (98)
T d1iuza_ 18 SKISVAAGEAIE--FVNNAGFPHNIVFDEDAVPAGVDADAIS-YDDYLNSKGETVVRKL---STPGVYGVYCEPH-AGAG 90 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECTTSSCTTCCHHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEE--EEECCCCcccEEEeCCCccccccccccc-ccCcccCCCcEEEEec---CCCceEEEEeCCC-ccCC
Confidence 689999999865 5676665555444332211110001000 1113357788777666 4699999999763 2479
Q ss_pred ceEeEEEe
Q 008592 148 LYGPIIIL 155 (560)
Q Consensus 148 l~G~liV~ 155 (560)
|.|.|+|+
T Consensus 91 M~G~I~Ve 98 (98)
T d1iuza_ 91 MKMTITVQ 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999996
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=97.74 E-value=3.5e-05 Score=63.93 Aligned_cols=91 Identities=9% Similarity=0.001 Sum_probs=62.5
Q ss_pred CCCcEEEEecC-CEEEEEEEeCCCcCeeEEecCccc--CC-------------------CcCCCCCCCcCccccCCCCeE
Q 008592 65 FPGPRIIAREG-DRLLIRVINNVKYNVTIHWHGVRQ--LR-------------------SGWADGPAYVTQCPIQTGQSY 122 (560)
Q Consensus 65 ~pGP~i~~~~G-d~v~v~~~N~l~~~~~iH~HG~~~--~~-------------------~~~~DGv~~~tq~~i~pG~~~ 122 (560)
|--.+|.|+.| ++|+|+|+|....++++=.|-+.. .. .+.++.+- ....-|.||++.
T Consensus 15 fd~~~i~V~aG~e~v~i~~~N~g~lph~~~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi-a~t~~l~pGe~~ 93 (129)
T d1cuoa_ 15 YSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVI-AFTPIIGGGEKT 93 (129)
T ss_dssp CSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCS-EECCCBCTTCEE
T ss_pred CcccEEEEeCCCEEEEEEEEeCCcCCceeEEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhh-hhccccCccccc
Confidence 43368999999 799999999987653322222210 00 00011111 112458999999
Q ss_pred EEEEEEc--ccCcceeEeeccccccccceEeEEEeC
Q 008592 123 VYNFTVT--GQRGTLFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 123 ~Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
+..|+++ .++|+|-|-|-.-+.++||.|.|+|++
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~~gM~G~l~V~~ 129 (129)
T d1cuoa_ 94 SVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred eEEEEccccCCCceEEEEeCCCCcccCcEEEEEEeC
Confidence 9999986 359999999988777899999999974
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.70 E-value=4e-05 Score=63.41 Aligned_cols=90 Identities=11% Similarity=0.084 Sum_probs=63.7
Q ss_pred CCCcEEEE-ecCCEEEEEEEeCCCcCeeEEecCc--ccC-------------------CCcCCCCCCCcCccccCCCCeE
Q 008592 65 FPGPRIIA-REGDRLLIRVINNVKYNVTIHWHGV--RQL-------------------RSGWADGPAYVTQCPIQTGQSY 122 (560)
Q Consensus 65 ~pGP~i~~-~~Gd~v~v~~~N~l~~~~~iH~HG~--~~~-------------------~~~~~DGv~~~tq~~i~pG~~~ 122 (560)
|--..|.| +.|++|+|+|+|....++++=.|-. ... ..+.++.+...| .-|.||++.
T Consensus 15 Fd~~~i~V~k~Ge~v~l~~~N~g~~pH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t-~~l~pGes~ 93 (128)
T d1jzga_ 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHT-KLIGSGEKD 93 (128)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEEC-CCBCTTCEE
T ss_pred CccceEEEecCCCEEEEEEEeCCccchheeecCcccccchhHHHHHHHHHhhhhccccCCCCccchhhcc-cccCCCceE
Confidence 33468999 5899999999999876544433321 110 001133332222 458999999
Q ss_pred EEEEEEc--ccCcceeEeeccccccccceEeEEEe
Q 008592 123 VYNFTVT--GQRGTLFWHAHISWLRATLYGPIIIL 155 (560)
Q Consensus 123 ~Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 155 (560)
+.+|+++ .++|+|-|-|-.-+.++||.|.|+|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~~gM~G~l~Ve 128 (128)
T d1jzga_ 94 SVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK 128 (128)
T ss_dssp EEEEEGGGCCTTCCEEEECCSTTGGGTSEEEEEEC
T ss_pred EEEEEeeccCCCceEEEEECCCCcccccEEEEEEC
Confidence 9999986 57999999998877779999999995
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=97.69 E-value=7.5e-06 Score=65.69 Aligned_cols=81 Identities=17% Similarity=0.203 Sum_probs=54.9
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC------CcCccccCCCCeEEEEEEEcccCcceeEeecc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA------YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~ 141 (560)
.+|++++||+|+ +.|.....++........ .++.. ........|++++++.|..+.++|+|||+|-.
T Consensus 19 ~~i~v~~GdtV~--f~n~~~~~h~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T d2cj3a1 19 AKLTIKPGDTVE--FLNNKVPPHNVVFDAALN-----PAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEP 91 (105)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECSSSS-----TTCCHHHHHHHCEEEEECSTTCEEEEECCTTCCSEEEEEECTT
T ss_pred CEEEECCCCEEE--EEECCCCceeeEeccCCC-----CccccccCCcccccccccCCCcceEEEEEeccCCceEEEEeCC
Confidence 599999999865 567766555544432211 11110 01123468999999999877789999999975
Q ss_pred ccccccceEeEEEeC
Q 008592 142 SWLRATLYGPIIILP 156 (560)
Q Consensus 142 ~~~~~Gl~G~liV~~ 156 (560)
.-.+||.|.|+|+.
T Consensus 92 -H~~~GM~G~I~V~g 105 (105)
T d2cj3a1 92 -HRGAGMVGKITVAG 105 (105)
T ss_dssp -TGGGTCEEEEEECC
T ss_pred -CcCCCcEEEEEEeC
Confidence 33479999999963
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=97.69 E-value=4.5e-05 Score=63.28 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=61.0
Q ss_pred CCCcEEEE-ecCCEEEEEEEeCCCcCeeEEecCcccC------------------C---CcCCCCCCCcCccccCCCCeE
Q 008592 65 FPGPRIIA-REGDRLLIRVINNVKYNVTIHWHGVRQL------------------R---SGWADGPAYVTQCPIQTGQSY 122 (560)
Q Consensus 65 ~pGP~i~~-~~Gd~v~v~~~N~l~~~~~iH~HG~~~~------------------~---~~~~DGv~~~tq~~i~pG~~~ 122 (560)
|---+|.| +.|++|+|+|.|....++.+=.|-+... . .+-.+.+-. .-.-|.||++.
T Consensus 15 f~~~~i~V~k~G~~V~l~~~N~g~l~h~~m~hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via-~t~~l~pget~ 93 (129)
T d2ccwa1 15 YNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIA-HTKVIGGGESD 93 (129)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEE-ECCCBCTTCEE
T ss_pred CccceEEEecCCCEEEEEEEcCCcCchheeeccccccCcccHHHHHHHHHHhhhccccCCCccccccc-cccccCCCceE
Confidence 34468999 6899999999999765422222222110 0 000111111 12347899999
Q ss_pred EEEEEEc--ccCcceeEeeccccccccceEeEEEe
Q 008592 123 VYNFTVT--GQRGTLFWHAHISWLRATLYGPIIIL 155 (560)
Q Consensus 123 ~Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 155 (560)
+..|+++ .++|+|+|-|-.-+.++||.|.|.|.
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~~gM~G~l~V~ 128 (129)
T d2ccwa1 94 SVTFDVSKIAAGENYAYFCSFPGHWAMMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGGTSEEEEEEC
T ss_pred EEEEEecccCCCccEEEEeCCCChhhCcEEEEEEc
Confidence 9999986 47999999998877789999999984
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=97.67 E-value=0.00011 Score=63.85 Aligned_cols=85 Identities=20% Similarity=0.254 Sum_probs=67.8
Q ss_pred eEEEEECCCC---------CCcEEEEecCCEEEEEEEeCCCc-CeeEEecCcccCCCcCCCCCC----CcCccccCCCCe
Q 008592 56 KSIVTVNGQF---------PGPRIIAREGDRLLIRVINNVKY-NVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQS 121 (560)
Q Consensus 56 ~~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l~~-~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~ 121 (560)
....++||+- +-++|.+++|+++++|+.|.... ...+|.+|....... .||++ -+....|.||++
T Consensus 34 pd~~liNGkg~~~~~~~~~~~~~~~v~~g~~~rlRlina~~~~~~~~~id~H~~~Via-~DG~~v~P~~~d~i~i~~GqR 112 (168)
T d1v10a2 34 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 112 (168)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CceeeecCCCCcCCCCcCCCceEEEECCCCEEEEEEEecccCceEEEEECCCeEEEEE-eCCeecCceEEeEEEEccCce
Confidence 3467899862 34789999999999999999854 677888888776665 89975 235667999999
Q ss_pred EEEEEEEcccCcceeEeecc
Q 008592 122 YVYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 122 ~~Y~~~~~~~~Gt~wYH~H~ 141 (560)
++..+++.+.+|.||-+...
T Consensus 113 ~dvlv~~~~~~~~y~ira~~ 132 (168)
T d1v10a2 113 YSVVVEANQAVGNYWIRANP 132 (168)
T ss_dssp EEEEEECCSCSSEEEEEEEE
T ss_pred EEEEEECCCCCCcEEEEEEe
Confidence 99999986678999998754
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.66 E-value=9.4e-05 Score=67.14 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=68.6
Q ss_pred cCceeEEEEECCCCC----------------------CcEEEEecCCEEEEEEEeCC-----CcCeeEEecCcccCCCcC
Q 008592 52 LCQTKSIVTVNGQFP----------------------GPRIIAREGDRLLIRVINNV-----KYNVTIHWHGVRQLRSGW 104 (560)
Q Consensus 52 ~g~~~~~~~~ng~~p----------------------GP~i~~~~Gd~v~v~~~N~l-----~~~~~iH~HG~~~~~~~~ 104 (560)
.|.....|.+||+.- ...+++...+..++.+.+.. ..++.+|+||........
T Consensus 23 ~g~~~~~w~iNg~s~~~d~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~n~~~~~HP~HlHG~~F~Vlg~ 102 (216)
T d2q9oa3 23 TGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGR 102 (216)
T ss_dssp SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEE
T ss_pred CCCcEEEEEECCEecccCCCCCChhhhhcCCcccccccceeeccccccceeEEEEeccCCccccccceeecCceEEEEee
Confidence 344455699998632 12456777666665554432 357999999986543221
Q ss_pred CCCCCCc------------------------CccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeC
Q 008592 105 ADGPAYV------------------------TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 105 ~DGv~~~------------------------tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
..|.... .-..++||+..+.+|.+ +.+|.|.||||..... .||...|+.++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~ir~~a-dnpG~Wl~HCHi~~H~~~GM~~~~~~~p 178 (216)
T d2q9oa3 103 SPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRT-DNPGAWLFHCHIAWHVSGGLSVDFLERP 178 (216)
T ss_dssp SCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEEC-CSCEEEEEEECCHHHHHTTCEEEEEECH
T ss_pred cCCCCCcccccccccccccccccccCCCceeceEEeCCCCEEEEEEEC-CCCeEEEEEccCCcccccCCeEEEEEcc
Confidence 2221110 11237899999999998 7899999999987665 89988776554
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=97.60 E-value=0.00014 Score=63.41 Aligned_cols=85 Identities=19% Similarity=0.221 Sum_probs=66.8
Q ss_pred eEEEEECCC--------CCCcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeE
Q 008592 56 KSIVTVNGQ--------FPGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSY 122 (560)
Q Consensus 56 ~~~~~~ng~--------~pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~ 122 (560)
....++||+ -+.++|.|++|+++++||.|.. .....+++.|....... .||++ -+....|.||+++
T Consensus 34 pd~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~H~~~via-~DG~~v~P~~~~~l~i~~gqR~ 112 (172)
T d1hfua2 34 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE-VDGELTEPHTVDRLQIFTGQRY 112 (172)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCEE
T ss_pred CCcEEECccCccCCCCCCCceEEEECCCCEEEEEEeeecCCceEEEEeCCCeEEEEE-eCCEEcccEEeceEeccCCeEE
Confidence 345678876 3458999999999999999987 45677888887666554 79975 2345669999999
Q ss_pred EEEEEEcccCcceeEeecc
Q 008592 123 VYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 123 ~Y~~~~~~~~Gt~wYH~H~ 141 (560)
+.-+++.+..|.||-....
T Consensus 113 dvlv~~~~~~~~Y~ira~~ 131 (172)
T d1hfua2 113 SFVLDANQPVDNYWIRAQP 131 (172)
T ss_dssp EEEEECCSCSSEEEEEEEE
T ss_pred EEEEEcCCCCCcEEEEEEe
Confidence 9999986667999998764
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.58 E-value=0.00017 Score=58.89 Aligned_cols=74 Identities=14% Similarity=0.273 Sum_probs=55.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..|.++.|++|+++|+|.. .. ||+.++.. . + +.-+.||+..+..|++ +++|+|+|.|+. .|..
T Consensus 47 ~~l~vp~G~~V~~~lts~D-V~-----H~f~ip~~---~----v-~~d~~PG~~~~~~~~~-~~~G~y~~~C~~~CG~~H 111 (122)
T d2cuaa_ 47 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEGT---N----I-NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 111 (122)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETTS---S----C-EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEeCCCEEEEEEEcCC-cc-----ceeEecCC---C----e-eEEEecCceEEEEEEe-ccceeEEEEehhccCCCc
Confidence 5899999999999999975 22 45443321 1 1 2346789999999986 899999999984 2222
Q ss_pred ccceEeEEEeC
Q 008592 146 ATLYGPIIILP 156 (560)
Q Consensus 146 ~Gl~G~liV~~ 156 (560)
.+|.|-|+|++
T Consensus 112 ~~M~g~i~V~e 122 (122)
T d2cuaa_ 112 QNMFGTIVVKE 122 (122)
T ss_dssp TTCEEEEEEEC
T ss_pred ccCeEEEEEEC
Confidence 68999999975
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=97.56 E-value=8.2e-05 Score=61.21 Aligned_cols=76 Identities=11% Similarity=0.033 Sum_probs=49.5
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
..|++++||+|+. .|.....+..-.++.. ..+. ......++++|+|.| +.+|+|+|+|=.| ..+|
T Consensus 21 ~~itI~~GdtV~f--~n~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~tF---~~~G~Y~Y~C~pH-~~~G 85 (123)
T d1adwa_ 21 AFVRAEPGDVINF--VPTDKSHNVEAIKEIL-----PEGV----ESFKSKINESYTLTV---TEPGLYGVKCTPH-FGMG 85 (123)
T ss_dssp SEEEECTTEEEEE--EESSSSCCCEECTTSC-----CTTC----CCCBCCTTCCEEEEE---CSCEEEEEECGGG-GGGT
T ss_pred CEEEECCCCEEEE--EeCCCCcceecccCcc-----cccc----ccccccCCcceEEec---cCCCeEEEEEccC-CCCC
Confidence 6999999999666 4554333322222211 1111 123457788888777 4699999999763 3479
Q ss_pred ceEeEEEeCCC
Q 008592 148 LYGPIIILPKQ 158 (560)
Q Consensus 148 l~G~liV~~~~ 158 (560)
|.|.|+|.++.
T Consensus 86 M~G~I~Vg~~~ 96 (123)
T d1adwa_ 86 MVGLVQVGDAP 96 (123)
T ss_dssp CEEEEEESSSC
T ss_pred CEEEEEECCCC
Confidence 99999997653
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.54 E-value=0.00017 Score=58.92 Aligned_cols=71 Identities=21% Similarity=0.371 Sum_probs=55.8
Q ss_pred EEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCc
Q 008592 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517 (560)
Q Consensus 438 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 517 (560)
+.++.|+.|.|.|.|.. ..|.|.+-.... .+.+.||....+.|+++.|
T Consensus 49 l~vp~G~~V~~~lts~D----V~H~f~ip~~~v----------------------------~~d~~PG~~~~~~~~~~~~ 96 (122)
T d2cuaa_ 49 IEVPQGAEIVFKITSPD----VIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKRP 96 (122)
T ss_dssp EEEETTSEEEEEEEBSS----SCEEEEETTSSC----------------------------EEEECBTBCEEEEEECCSC
T ss_pred EEEeCCCEEEEEEEcCC----ccceeEecCCCe----------------------------eEEEecCceEEEEEEeccc
Confidence 78999999999999853 467665433221 3446688888999999999
Q ss_pred eeeEEEeec---hhhhhcccEEEEEEcC
Q 008592 518 GVWFMHCHL---EVHTSWGLKMAWIVND 542 (560)
Q Consensus 518 G~w~~HCHi---l~H~d~GMm~~~~V~~ 542 (560)
|.|.+.|+. ..| .+|...+.|++
T Consensus 97 G~y~~~C~~~CG~~H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 97 GEYRIICNQYCGLGH--QNMFGTIVVKE 122 (122)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEEC
T ss_pred eeEEEEehhccCCCc--ccCeEEEEEEC
Confidence 999999998 568 47999998864
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=97.53 E-value=0.0001 Score=60.79 Aligned_cols=90 Identities=10% Similarity=0.055 Sum_probs=63.3
Q ss_pred CCCcEEEEe-cCCEEEEEEEeCCCcCeeEEecCccc--------------------CCCcCCCC-CCCcCccccCCCCeE
Q 008592 65 FPGPRIIAR-EGDRLLIRVINNVKYNVTIHWHGVRQ--------------------LRSGWADG-PAYVTQCPIQTGQSY 122 (560)
Q Consensus 65 ~pGP~i~~~-~Gd~v~v~~~N~l~~~~~iH~HG~~~--------------------~~~~~~DG-v~~~tq~~i~pG~~~ 122 (560)
|--.+|.|+ .|++|+|+|+|....++++=.|-+-. ...+.+|. +-. .-..|.||++.
T Consensus 15 fd~~~i~V~~~ge~v~i~~~N~g~~pH~~~~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla-~t~~l~pGes~ 93 (128)
T d1nwpa_ 15 FNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIA-HTKVIGAGEKD 93 (128)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEE-ECCCBCTTCEE
T ss_pred CcCCeEEEecCCcEEEEEEEeCCccccceeeecccccccchhHHHHHHHHhhhccccCCCCCchhhee-ecccccCCCce
Confidence 334689996 59999999999987665554443211 00000111 101 12358999999
Q ss_pred EEEEEEc--ccCcceeEeeccccccccceEeEEEe
Q 008592 123 VYNFTVT--GQRGTLFWHAHISWLRATLYGPIIIL 155 (560)
Q Consensus 123 ~Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 155 (560)
+..|+++ .++|+|-|-|-.-+.++||.|.|+|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~~~M~G~l~V~ 128 (128)
T d1nwpa_ 94 SVTFDVSKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEEecccCCCceEEEEECCCCcccCceEEEEEC
Confidence 9999987 47899999999888889999999985
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=97.49 E-value=8.9e-05 Score=60.86 Aligned_cols=75 Identities=13% Similarity=0.099 Sum_probs=47.7
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
..|++++||+|+ ++|.... +..|...... .+|.. .....++++|+|.| +.+|+|.|+|..| ...|
T Consensus 21 ~~itI~~GdTV~--w~n~~~~-~~~~~~~~~~-----p~~~~---~~~~~~~~~~s~Tf---~~~G~Y~Y~C~pH-~~~G 85 (124)
T d1bqka_ 21 ASLKVAPGDTVT--FIPTDKG-HNVETIKGMI-----PDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPH-YGMG 85 (124)
T ss_dssp SEEEECTTCEEE--EECSSSS-CCCEECTTCS-----CTTCC---CCBCCTTCCEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCeEE--EEECCCC-cccccccccC-----CCccc---cccccCCccEEEec---CCCceEEEEeccC-cCCC
Confidence 689999999964 5555432 2222211111 12211 13456788888777 4689999999763 3479
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.+.
T Consensus 86 M~G~IvVgd~ 95 (124)
T d1bqka_ 86 MVGVVQVGDA 95 (124)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEECCC
Confidence 9999999764
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=97.40 E-value=0.00039 Score=60.28 Aligned_cols=83 Identities=20% Similarity=0.233 Sum_probs=65.9
Q ss_pred EEEECCC--------CCCcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeEEE
Q 008592 58 IVTVNGQ--------FPGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSYVY 124 (560)
Q Consensus 58 ~~~~ng~--------~pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~~Y 124 (560)
...+||. -+.++|.|++|+++++||.|.. .....++.+|....... .||++ -+.+..|.||++++.
T Consensus 38 ~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlRlIN~~~~~~~~~~id~h~~~via-~DG~~v~P~~~d~l~i~~gqRydv 116 (170)
T d1gyca2 38 ATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIE-VDGINSQPLLVDSIQIFAAQRYSF 116 (170)
T ss_dssp EEEETTBCCBTTCTTSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCEEEE
T ss_pred cccccCccccCCCCCCCceEEEECCCCEEEEEEeecCCCceeeEEeCCCeEEEEE-eCCeeccceEeeEEEecCCeEEEE
Confidence 4566764 2448999999999999999987 55778888887766554 89975 235667999999999
Q ss_pred EEEEcccCcceeEeecc
Q 008592 125 NFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 125 ~~~~~~~~Gt~wYH~H~ 141 (560)
.+++.+.+|.||-+...
T Consensus 117 lv~~~~~~~~y~ira~~ 133 (170)
T d1gyca2 117 VLNANQTVGNYWIRANP 133 (170)
T ss_dssp EEECCSCSSEEEEEEEE
T ss_pred EEeCCCCCCcEEEEEec
Confidence 99986669999998764
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=97.40 E-value=0.00023 Score=57.98 Aligned_cols=76 Identities=16% Similarity=0.155 Sum_probs=48.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
..|++++||+|+. .|... .++++.-. ..+.+|.. .....+++++++.| +.+|+|.|+|-. ...+|
T Consensus 21 ~~itI~~GDTV~f--~n~~~-~Hnv~~~~-----~~~~~~~~---~~~~~~~~~~s~tF---~~~G~y~Y~Ctp-H~~~G 85 (120)
T d1paza_ 21 AYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAE---KFKSKINENYVLTV---TQPGAYLVKCTP-HYAMG 85 (120)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEC---CSCEEEEEECTT-TGGGT
T ss_pred CEEEECCCCEEEE--eeCCC-cceEeecc-----ccCccccc---ccccccCceEEEEe---cCCCeEEEEEee-CCCCC
Confidence 7899999999755 45532 33333322 11122221 12335577777777 468999999975 23379
Q ss_pred ceEeEEEeCCC
Q 008592 148 LYGPIIILPKQ 158 (560)
Q Consensus 148 l~G~liV~~~~ 158 (560)
|.|.|+|.++.
T Consensus 86 M~G~I~Vg~~~ 96 (120)
T d1paza_ 86 MIALIAVGDSP 96 (120)
T ss_dssp CEEEEEESSSC
T ss_pred CEEEEEECCCC
Confidence 99999998753
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=97.39 E-value=7.9e-05 Score=58.51 Aligned_cols=79 Identities=18% Similarity=0.138 Sum_probs=44.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
.+|++++||+|++. |.....+...+--.. .+....++ ........+++++++.| +.+|+|+|+|-.| -..|
T Consensus 19 ~~i~V~~GdtV~f~--~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~tf---~~~G~y~Y~C~~H-~~~G 89 (97)
T d2jxma1 19 KALSISAGDTVEFV--MNKVGPHNVIFDKVP-AGESAPAL--SNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RGAG 89 (97)
T ss_dssp SEEEECTTCEEEEE--ECSSCCCCBEEEECC-TTSCHHHH--CBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TTTT
T ss_pred CEEEECCCCEEEEE--ECCCcceeEEEecCC-Cccccccc--cccccccCcceEEEEec---CCCeEEEEEEccC-CCCC
Confidence 59999999997765 444332221111000 00000000 00112345667666665 5699999999542 2369
Q ss_pred ceEeEEEe
Q 008592 148 LYGPIIIL 155 (560)
Q Consensus 148 l~G~liV~ 155 (560)
|.|.|+|+
T Consensus 90 M~G~I~Ve 97 (97)
T d2jxma1 90 MVGTITVE 97 (97)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999996
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.35 E-value=0.001 Score=56.69 Aligned_cols=95 Identities=18% Similarity=0.111 Sum_probs=73.4
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccc--eeEeCCCCEEEEEE
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERN--TVGVPSGGWVAIRF 512 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rD--Tv~vpp~g~v~irf 512 (560)
...++++.|++|.+ .|.+ ....-.||+-|.+|--+-.. |. +.|++.++ |+.|++|+-..+.|
T Consensus 69 ~~aL~AkvGEtV~~--~~~g--pN~~SsfHvIGg~~D~V~~~-G~-----------~~n~p~~~~qT~~v~~G~a~~~~~ 132 (178)
T d1mzya2 69 EGALKAKVGDNVLF--VHSQ--PNRDSRPHLIGGHGDLVWET-GK-----------FHNAPERDLETWFIRGGTAGAALY 132 (178)
T ss_dssp GGCEEEETTCEEEE--EEEE--SSSCBCEEEETCCEEEEETT-CC-----------TTSCCEEEESBCCBCTTEEEEEEE
T ss_pred CCCcccccCCeEEE--eccc--CCCCCCcccccCccceEccC-Cc-----------cCCCCCCCceEEEecCCceeEEEE
Confidence 44689999999854 3332 24677999999999755432 32 23555554 89999999999999
Q ss_pred EecCceeeEEEeechhh-hhcccEEEEEEcCCCC
Q 008592 513 LADNPGVWFMHCHLEVH-TSWGLKMAWIVNDGKG 545 (560)
Q Consensus 513 ~adnpG~w~~HCHil~H-~d~GMm~~~~V~~~~~ 545 (560)
++.-||.+.|--|.|.. .+.|.+..|.|..+.+
T Consensus 133 tf~~PG~Y~~VdH~l~~A~~kGA~g~l~V~G~~~ 166 (178)
T d1mzya2 133 KFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 166 (178)
T ss_dssp ECCSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EeCCCeEEEEEccHHHHHHhCCCeEEEEeCCCCC
Confidence 99999999999999855 7999999999975543
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=97.29 E-value=9.7e-05 Score=58.88 Aligned_cols=84 Identities=17% Similarity=0.148 Sum_probs=57.5
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe-c
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA-D 515 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a-d 515 (560)
.+.++.|++|.|+..+ ...|..++....+.. + ..........++..+.|+....+.|.+ +
T Consensus 20 ~l~v~~GdtV~f~n~~-----~~~h~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~g~~~~~~f~~~~ 80 (105)
T d2q5ba1 20 NVTVHPGDTVKWVNNK-----LPPHNILFDDKQVPG-----A---------SKELADKLSHSQLMFSPGESYEITFSSDF 80 (105)
T ss_dssp EEEECTTEEEEEEECS-----SCCEEEEECGGGSGG-----G---------CHHHHHHHCEEEEECSTTCEEEEEECTTS
T ss_pred EEEECCCCEEEEEECC-----CCCceeEeecCcccc-----c---------ccccCCccccccccccCCceEEEEEEecc
Confidence 4889999999986322 245655554333210 0 000011124567778899999999985 7
Q ss_pred CceeeEEEeechhhhhcccEEEEEEc
Q 008592 516 NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 516 npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.+|.|.|+|.. |...||...+.|+
T Consensus 81 ~~G~y~y~C~~--H~~~GM~G~I~Ve 104 (105)
T d2q5ba1 81 PAGTYTYYCAP--HRGAGMVGKITVE 104 (105)
T ss_dssp CSEEEEEECST--TGGGTCEEEEEEC
T ss_pred CCceEEEEeCC--CCCCCCEEEEEEc
Confidence 89999999975 9999999999985
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.19 E-value=0.0024 Score=55.61 Aligned_cols=81 Identities=14% Similarity=0.160 Sum_probs=64.6
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
..+.++.|++++|.|+|.+. ...+.|+|+||+|+|++.... +..|...|++.|.+|+...|-++++
T Consensus 53 ~~~~v~~g~~~rlR~iN~~~--~~~~~~~id~h~~~via~DG~------------~v~P~~~~~~~i~~GqRydvlv~a~ 118 (181)
T d2q9oa2 53 ANVTLTPGKRHRLRILNTST--ENHFQVSLVNHTMTVIAADMV------------PVNAMTVDSLFLAVGQRYDVVIDAS 118 (181)
T ss_dssp CEEEECTTCEEEEEEEECCS--SCCEEEEETTBCEEEEEETTE------------EEEEEEESCEEECTTCEEEEEEECC
T ss_pred eEEEECCCCEEEEEEecccC--CccEEEEECCceEEEEEeCCe------------EccceEeCEEEecCCcEEEEEEeCC
Confidence 35889999999999999763 457789999999999998522 2346778999999999999999995
Q ss_pred -CceeeEEEeechhhh
Q 008592 516 -NPGVWFMHCHLEVHT 530 (560)
Q Consensus 516 -npG~w~~HCHil~H~ 530 (560)
.+|.|-+.-....+.
T Consensus 119 ~~~~~Y~ir~~~~~~~ 134 (181)
T d2q9oa2 119 RAPDNYWFNVTFGGQA 134 (181)
T ss_dssp SCSSEEEEEEECCGGG
T ss_pred CCCccEEEEEeccccc
Confidence 557777766655444
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=97.11 E-value=0.00066 Score=53.04 Aligned_cols=80 Identities=15% Similarity=0.137 Sum_probs=50.1
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|+..+ ...|.++.+.... . .. ...+....+.....++. .+.+.++.
T Consensus 19 ~i~v~~GdtV~f~n~~-----~~~h~~~~~~~~~-------~--~~-------~~~~~~~~~~~~~~~~~--t~~~tf~~ 75 (98)
T d2plta_ 19 TLTIKSGETVNFVNNA-----GFPHNIVFDEDAI-------P--SG-------VNADAISRDDYLNAPGE--TYSVKLTA 75 (98)
T ss_dssp EEEECTTCEEEEEECS-----SCCEEEEECGGGS-------C--TT-------CCHHHHCEEEEECSTTC--EEEEECCS
T ss_pred EEEECCCCEEEEEECC-----CCceeEEEecCCc-------c--cc-------ccCCcccccccccCCCc--eEEEEecC
Confidence 4789999999997432 2456555443221 0 00 00011122344444444 45677899
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|-|+|.. |...||...|.|+
T Consensus 76 ~G~y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d2plta_ 76 AGEYGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECGG--GGGGTCEEEEEEC
T ss_pred CceEEEEeCc--CCCCCCEEEEEEC
Confidence 9999999964 9999999999884
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=97.09 E-value=0.0012 Score=59.36 Aligned_cols=85 Identities=13% Similarity=0.231 Sum_probs=65.5
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
..++.++.|+++++.|+|.+. ...+.|||+||+|+||+.. | .+..|...|.+.|.+|+..-|.+++
T Consensus 74 ~~~~~v~~g~~~RlRliNa~~--~~~~~~~idgh~~~VIa~D-G-----------~~v~P~~v~~l~i~pGqRydvlv~~ 139 (209)
T d1aoza2 74 PYIFHVSPKKTYRIRIASTTA--LAALNFAIGNHQLLVVEAD-G-----------NYVQPFYTSDIDIYSGESYSVLITT 139 (209)
T ss_dssp CCCEEECTTCEEEEEEEECCS--SCEEEEEETTCCEEEEEET-T-----------EEEEEEEESCEEECTTCEEEEEEEC
T ss_pred ceEEEEcCCCEEEEEEEecCC--ceeEEEEeCCCcEEEEecC-C-----------EEcccceeeeEEEccCcEEEEEEEe
Confidence 446899999999999999763 4579999999999999985 2 1235777899999999999999999
Q ss_pred cC-ce-eeEEEeechhhhhcc
Q 008592 515 DN-PG-VWFMHCHLEVHTSWG 533 (560)
Q Consensus 515 dn-pG-~w~~HCHil~H~d~G 533 (560)
+. +| .|.++=.........
T Consensus 140 ~~~~~~~y~i~~~~~~~~~~~ 160 (209)
T d1aoza2 140 DQNPSENYWVSVGTRARHPNT 160 (209)
T ss_dssp CSCTTCCEEEEEEEESSCCCS
T ss_pred cCCCCCceEEEEeccccCCCc
Confidence 65 33 465655554444333
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=96.99 E-value=0.0003 Score=55.14 Aligned_cols=39 Identities=18% Similarity=0.251 Sum_probs=30.2
Q ss_pred eeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 499 TVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 499 Tv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
...+.+|... .+.++.||.|.|||.. |...||...|.|+
T Consensus 60 ~~~~~~g~t~--~~tf~~~G~y~Y~C~~--H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 60 GLLFAAGESF--TSTFTEPGTYTYYCEP--HRGAGMVGKVVVE 98 (98)
T ss_dssp EEECSTTCEE--EEECCSCEEEEEECGG--GTTTTCEEEEEEC
T ss_pred ccccCCCcEE--EEeccCCceEEEEecc--CCCCCCEEEEEEC
Confidence 3445566543 4466899999999964 9999999999884
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=96.98 E-value=0.0019 Score=49.55 Aligned_cols=41 Identities=17% Similarity=0.318 Sum_probs=32.4
Q ss_pred cceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 497 RNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 497 rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
-+...+.+|.. +++.++.||.|.|+|-. |...||...+.|+
T Consensus 51 ~~~~~~~~g~~--~~~tF~~~G~y~Y~C~~--H~~~gM~G~I~Ve 91 (91)
T d1bxua_ 51 HKDLAFSPGET--FEATFSEPGTYTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEEECSTTCE--EEEECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred ccccccCCCCC--EEEEeccCceEEEEeCC--CCCCCCEEEEEEC
Confidence 34556667765 45677999999999964 9999999999884
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=96.91 E-value=0.00074 Score=55.18 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=28.8
Q ss_pred EEEEecCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 510 IRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 510 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+.+.++.||.|.|+|.+ |...||...+.|.++.
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd~~ 96 (123)
T d1pmya_ 64 AVVKFDKEGVYGFKCAP--HYMMGMVALVVVGDKR 96 (123)
T ss_dssp EEEECCSCEEEEEECST--TTTTTCEEEEEESSCC
T ss_pred cccccCCCceEEEEecc--CCCCCCEEEEEECCCC
Confidence 55678999999999976 9999999999997653
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=96.90 E-value=0.0026 Score=54.12 Aligned_cols=101 Identities=18% Similarity=0.183 Sum_probs=75.3
Q ss_pred eEEEEECCCCC---C-cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC------CcCccccCCCCeEEEE
Q 008592 56 KSIVTVNGQFP---G-PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA------YVTQCPIQTGQSYVYN 125 (560)
Q Consensus 56 ~~~~~~ng~~p---G-P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~tq~~i~pG~~~~Y~ 125 (560)
-.-..|||..- | =.|+++.||+|.| +...-...++.|.-|-+...- |.+|.. ++.-..|+||+.-.-+
T Consensus 54 PthVVFNG~vgaltg~~aL~AkvGEtV~~-~~~gpN~~SsfHvIGg~~D~V-~~~G~~~n~p~~~~qT~~v~~G~a~~~~ 131 (178)
T d1mzya2 54 PSHIVFNGAVGALTGEGALKAKVGDNVLF-VHSQPNRDSRPHLIGGHGDLV-WETGKFHNAPERDLETWFIRGGTAGAAL 131 (178)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTCEEEE-EEEESSSCBCEEEETCCEEEE-ETTCCTTSCCEEEESBCCBCTTEEEEEE
T ss_pred CCEEEECCccCcccCCCCcccccCCeEEE-ecccCCCCCCcccccCccceE-ccCCccCCCCCCCceEEEecCCceeEEE
Confidence 34689999753 3 3699999999865 455567889999999876532 456542 2334568889877777
Q ss_pred EEEcccCcceeEeeccccc--cccceEeEEEeCCCC
Q 008592 126 FTVTGQRGTLFWHAHISWL--RATLYGPIIILPKQQ 159 (560)
Q Consensus 126 ~~~~~~~Gt~wYH~H~~~~--~~Gl~G~liV~~~~~ 159 (560)
|+. .++|+|=|..|.... ..|..|.|.|+++.+
T Consensus 132 ~tf-~~PG~Y~~VdH~l~~A~~kGA~g~l~V~G~~~ 166 (178)
T d1mzya2 132 YKF-LQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 166 (178)
T ss_dssp EEC-CSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EEe-CCCeEEEEEccHHHHHHhCCCeEEEEeCCCCC
Confidence 776 689999999998543 479999999997764
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=96.60 E-value=0.002 Score=50.09 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=27.0
Q ss_pred EEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 509 AIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 509 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.+.+.++.||.|-|+|- .|...||...+.|+
T Consensus 67 ~~~~tf~~~G~y~Y~C~--~H~~~GM~G~I~Ve 97 (97)
T d2jxma1 67 FYSVTLGTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CEEEECCSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred EEEEecCCCeEEEEEEc--cCCCCCCEEEEEEC
Confidence 46777899999999995 49999999999884
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.49 E-value=0.0018 Score=46.30 Aligned_cols=43 Identities=9% Similarity=0.098 Sum_probs=36.2
Q ss_pred eCCCCEEEEEEEecCce----------eeEEEeechh--hhhcccEEEEEEcCCC
Q 008592 502 VPSGGWVAIRFLADNPG----------VWFMHCHLEV--HTSWGLKMAWIVNDGK 544 (560)
Q Consensus 502 vpp~g~v~irf~adnpG----------~w~~HCHil~--H~d~GMm~~~~V~~~~ 544 (560)
|.||++.+.+|.+...+ .|.||||+-. +...||+..+.|....
T Consensus 3 V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g 57 (67)
T d1sddb1 3 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKG 57 (67)
T ss_dssp BCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTT
T ss_pred CCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCC
Confidence 68999999999985554 8999999955 7788999999997654
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=96.47 E-value=0.005 Score=49.68 Aligned_cols=33 Identities=21% Similarity=0.462 Sum_probs=28.2
Q ss_pred EEEEecCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 510 IRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 510 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+.++++.||.|-|+|-. |..+||...+.|.++.
T Consensus 64 ~s~tF~~~G~y~Y~Ctp--H~~~GM~G~I~Vg~~~ 96 (120)
T d1paza_ 64 YVLTVTQPGAYLVKCTP--HYAMGMIALIAVGDSP 96 (120)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESSSC
T ss_pred EEEEecCCCeEEEEEee--CCCCCCEEEEEECCCC
Confidence 45677999999999964 9999999999998753
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=96.39 E-value=0.0047 Score=48.07 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=48.0
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ..+|.+......+ ...... .......+.....+|... .+.++.
T Consensus 18 ~iti~~GdtV~f~--n~~---~~~Hnv~~~~~~~----------~~~~~~----~~~~~~~~~~~~~~g~t~--~~tF~~ 76 (99)
T d1plca_ 18 EFSISPGEKIVFK--NNA---GFPHNIVFDEDSI----------PSGVDA----SKISMSEEDLLNAKGETF--EVALSN 76 (99)
T ss_dssp EEEECTTCEEEEE--ECS---SCCBCCEECTTSS----------CTTCCH----HHHCCCTTCCBCSTTCEE--EEECCS
T ss_pred EEEECCCCEEEEE--ECC---CCCccEEEccCcC----------CCcccc----ccCcccccccccCCCceE--EEecCC
Confidence 4789999999995 432 3567754322111 000000 000011122334566644 445689
Q ss_pred ceeeEEEeechhhhhcccEEEEEE
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIV 540 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V 540 (560)
||.|-|+| ..|...||...+.|
T Consensus 77 ~G~y~Y~C--~pH~~~GM~G~I~V 98 (99)
T d1plca_ 77 KGEYSFYC--SPHQGAGMVGKVTV 98 (99)
T ss_dssp CEEEEEEC--GGGTTTTCEEEEEE
T ss_pred CceEEEEe--CCCcCCCcEEEEEE
Confidence 99999999 36999999999987
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=96.32 E-value=0.0068 Score=49.58 Aligned_cols=96 Identities=10% Similarity=0.052 Sum_probs=63.0
Q ss_pred EEe-cCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCC-----CCCCCCCCCCC----CccceeEeCCCCE
Q 008592 438 VVL-PFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPN-----KDPAKFNLVDP----AERNTVGVPSGGW 507 (560)
Q Consensus 438 ~~~-~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~-----~~~~~~~~~~p----~~rDTv~vpp~g~ 507 (560)
+.+ +.|+.|++++.|.+. .+|-+ =+|.|-+...+. .... .....-.+..| ..--|..+.||+.
T Consensus 20 i~V~k~G~~V~l~~~N~g~---l~h~~--m~hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget 92 (129)
T d2ccwa1 20 IVVDKSCKQFTMHLKHVGK---MAKVA--MGHNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGES 92 (129)
T ss_dssp EEECTTCSEEEEEEEECSC---CCHHH--HCBCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred EEEecCCCEEEEEEEcCCc---Cchhe--eeccccccCccc--HHHHHHHHHHhhhccccCCCccccccccccccCCCce
Confidence 677 689999999999763 44433 334555554321 0000 00000011111 2233778999999
Q ss_pred EEEEEEe---cCceeeEEEeechhhhhcccEEEEEEc
Q 008592 508 VAIRFLA---DNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 508 v~irf~a---dnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
..|.|++ +.||.|.|=|=+--|. .||-..+.|.
T Consensus 93 ~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 93 DSVTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 9999998 4899999999999997 8999999884
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=96.10 E-value=0.012 Score=47.66 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=27.9
Q ss_pred EEEEecCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 510 IRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 510 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+.+.++.+|.|-|+|=+ |..+||...+.|.++.
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vg~~~ 96 (123)
T d1adwa_ 64 YTLTVTEPGLYGVKCTP--HFGMGMVGLVQVGDAP 96 (123)
T ss_dssp EEEEECSCEEEEEECGG--GGGGTCEEEEEESSSC
T ss_pred eEEeccCCCeEEEEEcc--CCCCCCEEEEEECCCC
Confidence 45667899999999954 9999999999997653
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=96.08 E-value=0.0085 Score=48.56 Aligned_cols=32 Identities=25% Similarity=0.403 Sum_probs=27.7
Q ss_pred EEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 510 IRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 510 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
+.+.++.||.|-|+|. .|...||...+.|.+.
T Consensus 64 ~s~Tf~~~G~Y~Y~C~--pH~~~GM~G~IvVgd~ 95 (124)
T d1bqka_ 64 YKVTFTAPGVYGVKCT--PHYGMGMVGVVQVGDA 95 (124)
T ss_dssp EEEECCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred EEEecCCCceEEEEec--cCcCCCCEEEEEECCC
Confidence 4567799999999996 5999999999999764
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=96.07 E-value=0.0038 Score=49.14 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=36.2
Q ss_pred cceeEeCCCCEEEEEEEe-cCceeeEEEeechhhhhcccEEEEEEc
Q 008592 497 RNTVGVPSGGWVAIRFLA-DNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 497 rDTv~vpp~g~v~irf~a-dnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.+.....++....+.|.+ +.||.|.|+|-. |...||...+.|+
T Consensus 61 ~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~~--H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 61 HKQLLMSPGQSTSTTFPADAPAGEYTFYCEP--HRGAGMVGKITVA 104 (105)
T ss_dssp EEEEECSTTCEEEEECCTTCCSEEEEEECTT--TGGGTCEEEEEEC
T ss_pred ccccccCCCcceEEEEEeccCCceEEEEeCC--CcCCCcEEEEEEe
Confidence 456667788888888875 789999999964 9999999999985
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=96.02 E-value=0.0093 Score=51.48 Aligned_cols=82 Identities=20% Similarity=0.271 Sum_probs=60.7
Q ss_pred EEEEECCCCCCcEEEEecCCEEEEEEEeCC-CcCeeEEe-cCcccCCCcCCCCCC-----CcCccccCCCCeEEEEEEEc
Q 008592 57 SIVTVNGQFPGPRIIAREGDRLLIRVINNV-KYNVTIHW-HGVRQLRSGWADGPA-----YVTQCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 57 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~-HG~~~~~~~~~DGv~-----~~tq~~i~pG~~~~Y~~~~~ 129 (560)
..+++||+. .|.+.++ |.++++||.|.. .....+++ +|......+ .||.+ .+....|.||++++.-+.+.
T Consensus 49 d~~lvNG~~-~p~~~v~-~~~~RlRliNa~~~~~~~l~~~~g~~~~vIa-~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~ 125 (174)
T d1gska2 49 ETILVNGKV-WPYLEVE-PRKYRFRVINASNTRTYNLSLDNGGDFIQIG-SDGGLLPRSVKLNSFSLAPAERYDIIIDFT 125 (174)
T ss_dssp SEEEETTEE-SCEEECC-SSEEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEECG
T ss_pred CeEEecCcc-ceEEEec-CceEEEEEEecccCceeeEeecCCCcEEEEE-ECCCcccCceEeCEEEEcCCcEEEEEEECC
Confidence 367999985 5899886 668999999997 45678888 575433333 79864 23456689999999988886
Q ss_pred ccCcceeEeecc
Q 008592 130 GQRGTLFWHAHI 141 (560)
Q Consensus 130 ~~~Gt~wYH~H~ 141 (560)
..+|++|+=.+.
T Consensus 126 ~~~g~~~~l~~~ 137 (174)
T d1gska2 126 AYEGESIILANS 137 (174)
T ss_dssp GGTTCEEEEEEC
T ss_pred CCCCceEEEEcc
Confidence 668888876554
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=95.81 E-value=0.022 Score=46.30 Aligned_cols=100 Identities=11% Similarity=0.095 Sum_probs=65.4
Q ss_pred EEEecCC-CEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCC------CCCCCCCCCCCC-CCCCccceeEeCCCCEE
Q 008592 437 VVVLPFN-ASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGN------FDPNKDPAKFNL-VDPAERNTVGVPSGGWV 508 (560)
Q Consensus 437 ~~~~~~g-~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~------~~~~~~~~~~~~-~~p~~rDTv~vpp~g~v 508 (560)
.+.++.| +.|.+++.|.+. .+|-+ =+|.+-+...+... .........+.. ......-|..|.||+..
T Consensus 19 ~i~V~aG~e~v~i~~~N~g~---lph~~--~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~ 93 (129)
T d1cuoa_ 19 SISVPASCAEFTVNFEHKGH---MPKTG--MGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp EEEEETTCSEEEEEEEECSS---SCHHH--HCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred EEEEeCCCEEEEEEEEeCCc---CCcee--EEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhhhhccccCccccc
Confidence 3788999 899999999753 55543 35566444432100 000000000001 11123347889999999
Q ss_pred EEEEEe---cCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 509 AIRFLA---DNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 509 ~irf~a---dnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
.|.|++ +.||.|.|=|=+--|. .||-..+.|++
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 94 SVKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred eEEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 999997 4699999999999997 89999999863
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=95.67 E-value=0.024 Score=44.32 Aligned_cols=72 Identities=14% Similarity=0.128 Sum_probs=45.3
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|+ |.. ...|.++..... ... ...+.-.+.+++. +++.++.
T Consensus 34 ~i~V~~GdtV~f~--N~d---~~~H~v~~~~~~----------~~~------------~~~~~~~~~~g~~--~~~tf~~ 84 (105)
T d2ov0a1 34 ELHVKVGDTVTWI--NRE---AMPHNVHFVAGV----------LGE------------AALKGPMMKKEQA--YSLTFTE 84 (105)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT----------SSS------------SCEECCCBCTTEE--EEEEECS
T ss_pred EEEECCCCEEEEE--ECC---CCceeEEEeccc----------CCc------------ccccccccCCCce--EEEEecC
Confidence 4789999999994 432 357865432211 000 0112223445554 4566689
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.+.|+|-+ | .||.+.+.|+
T Consensus 85 pG~y~y~C~~--H--~~M~G~I~Ve 105 (105)
T d2ov0a1 85 AGTYDYHCTP--H--PFMRGKVVVE 105 (105)
T ss_dssp CEEEEEECSS--C--TTCEEEEEEC
T ss_pred CeEEEEEecC--C--CCCEEEEEEC
Confidence 9999999976 5 6999999884
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=95.59 E-value=0.019 Score=44.29 Aligned_cols=36 Identities=28% Similarity=0.454 Sum_probs=28.5
Q ss_pred eCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 502 VPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 502 vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
..++. .+.+.++.||.|-|+|- .|..+||...+.|+
T Consensus 63 ~~~~~--~~~~~f~~~G~y~y~C~--~H~~~GM~G~I~Ve 98 (98)
T d1iuza_ 63 NSKGE--TVVRKLSTPGVYGVYCE--PHAGAGMKMTITVQ 98 (98)
T ss_dssp CSTTC--EEEEECCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cCCCc--EEEEecCCCceEEEEeC--CCccCCCeEEEEEC
Confidence 34444 34567789999999996 49999999999884
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=95.56 E-value=0.014 Score=49.83 Aligned_cols=79 Identities=16% Similarity=0.207 Sum_probs=56.5
Q ss_pred EEEEECCCCCCcEEEEecCCEEEEEEEeCC-CcCeeEEe-cCcccCCCcCCCCCC-----CcCccccCCCCeEEEEEEEc
Q 008592 57 SIVTVNGQFPGPRIIAREGDRLLIRVINNV-KYNVTIHW-HGVRQLRSGWADGPA-----YVTQCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 57 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~-HG~~~~~~~~~DGv~-----~~tq~~i~pG~~~~Y~~~~~ 129 (560)
..+++||+. .|++.++ |.++++|+.|.. .....+++ +|....... .||.+ -++...|.||++++.-++..
T Consensus 42 d~~lvNG~~-~p~~~~~-~~~~RlR~iNa~~~~~~~~~~~~g~~~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~ 118 (165)
T d1kv7a2 42 DTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNFATSDNRPLYVIA-SDGGLLPEPVKVSELPVLMGERFEVLVEVN 118 (165)
T ss_dssp SEEEETTBS-SCEEEEE-EEEEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEEEC
T ss_pred CEEEEcCcc-cceEecc-CcEEEEEEEEcccCceeeEEecCCCeEEEEE-eCCccccCceEeCeEEECCCCEEEEEEECC
Confidence 478999995 5999886 779999999986 45667776 675433333 79864 23456799999999998874
Q ss_pred ccCcceeEe
Q 008592 130 GQRGTLFWH 138 (560)
Q Consensus 130 ~~~Gt~wYH 138 (560)
+..+..|+.
T Consensus 119 ~~~~~~~~~ 127 (165)
T d1kv7a2 119 DNKPFDLVT 127 (165)
T ss_dssp TTCCEEEEE
T ss_pred CCCcEEEEE
Confidence 333345554
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=95.43 E-value=0.032 Score=45.26 Aligned_cols=99 Identities=9% Similarity=0.046 Sum_probs=67.3
Q ss_pred EEEe-cCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCC-C----CCCCCCCCCCC--CCCCccceeEeCCCCEE
Q 008592 437 VVVL-PFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGN-F----DPNKDPAKFNL--VDPAERNTVGVPSGGWV 508 (560)
Q Consensus 437 ~~~~-~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~-~----~~~~~~~~~~~--~~p~~rDTv~vpp~g~v 508 (560)
.+.+ +.|+.|++++.|.+ ..+|-+= +|.+-++..+... . ........+-. ..+...-|..|.||+..
T Consensus 19 ~i~V~~~ge~v~i~~~N~g---~~pH~~~--~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~ 93 (128)
T d1nwpa_ 19 DIAIDKSCKTFTVELTHSG---SLPKNVM--GHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp EEEECTTCSEEEEEEEECS---SCCHHHH--CBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEEEecCCcEEEEEEEeCC---cccccee--eecccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCce
Confidence 3677 46999999999975 4688764 4455555543100 0 00000011111 22344568889999999
Q ss_pred EEEEEe---cCceeeEEEeechhhhhcccEEEEEEc
Q 008592 509 AIRFLA---DNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 509 ~irf~a---dnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.|.|++ +.||.|.|=|=+--|. .||-..+.|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 94 SVTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEEEEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 999998 4789999999999998 8999999884
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.39 E-value=0.045 Score=44.35 Aligned_cols=99 Identities=10% Similarity=0.058 Sum_probs=64.9
Q ss_pred EEEe-cCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCC----CCCCCCC-CC-CCC-CCCCccceeEeCCCCEE
Q 008592 437 VVVL-PFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGN----FDPNKDP-AK-FNL-VDPAERNTVGVPSGGWV 508 (560)
Q Consensus 437 ~~~~-~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~----~~~~~~~-~~-~~~-~~p~~rDTv~vpp~g~v 508 (560)
.+.+ +.|+.|++++.|.+ ..+|-+=+| ..-++..+.-. ..-.... .. +.. ..-...-|..|.||+..
T Consensus 19 ~i~V~k~Ge~v~l~~~N~g---~~pH~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~ 93 (128)
T d1jzga_ 19 AITVDKSCKQFTVNLSHPG---NLPKNVMGH--NWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (128)
T ss_dssp EEEECTTCSEEEEEEECCS---SSCHHHHCB--CCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred eEEEecCCCEEEEEEEeCC---ccchheeec--CcccccchhHHHHHHHHHhhhhccccCCCCccchhhcccccCCCceE
Confidence 3778 58999999999975 467776443 34444322000 0000000 00 000 11123457889999999
Q ss_pred EEEEEe---cCceeeEEEeechhhhhcccEEEEEEc
Q 008592 509 AIRFLA---DNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 509 ~irf~a---dnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.|.|++ +.||.|.|=|=+--|. .||-..+.|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 94 SVTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 999987 5899999999999998 9999999884
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=94.87 E-value=0.032 Score=42.93 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=27.7
Q ss_pred eCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEE
Q 008592 502 VPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIV 540 (560)
Q Consensus 502 vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V 540 (560)
..++.. +.++++.||.+-|+|- .|...||...+.|
T Consensus 64 ~~~~~~--~~~tf~~~G~y~y~C~--~H~~~GM~G~I~V 98 (99)
T d1bypa_ 64 NAPGEE--YSVTLTEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp CSTTCE--EEEEECSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred cCCCce--EEEEecCCceEEEEEC--cCCCCCCEEEEEE
Confidence 344443 4556689999999995 4999999999987
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=93.66 E-value=0.025 Score=43.78 Aligned_cols=31 Identities=23% Similarity=0.399 Sum_probs=26.7
Q ss_pred EEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 509 AIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 509 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.+.+.++.||.|-|+|.. |...||...|.|+
T Consensus 72 ~~~~~f~~~G~y~Y~C~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 72 SFKAKVSTPGTYTFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp EEEECCCSCEEEEEECST--TGGGTCEEEEEEC
T ss_pred EEEEeeCCCceEEEEecC--CcccCCeEEEEEC
Confidence 456677899999999985 9999999999884
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=92.71 E-value=0.28 Score=37.90 Aligned_cols=29 Identities=21% Similarity=0.218 Sum_probs=24.0
Q ss_pred EEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 509 AIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 509 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
...+.++.||.|.|+|=+ | .||.+.+.|+
T Consensus 78 ~~~~tf~~~G~y~y~C~~--H--~~M~G~I~Ve 106 (106)
T d1id2a_ 78 AYAITFNEAGSYDYFCTP--H--PFMRGKVIVE 106 (106)
T ss_dssp EEEEEECSCEEEEEECSS--C--TTCEEEEEEC
T ss_pred eEEEecCCCeEEEEEccC--C--CCCEEEEEEC
Confidence 355677999999999975 6 5999999884
|
| >d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Quinol oxidase (CyoA) species: Escherichia coli [TaxId: 562]
Probab=87.00 E-value=0.96 Score=37.43 Aligned_cols=74 Identities=15% Similarity=0.190 Sum_probs=53.1
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
-+.++.|+.|++.+.+.. ..|.|.+-.... -..+.||-...+.|.++.
T Consensus 28 ~l~lP~g~pV~~~ltS~D----ViHsF~vP~l~~----------------------------k~daiPG~~~~~~~~~~~ 75 (158)
T d1cyxa_ 28 EIAFPANTPVYFKVTSNS----VMHSFFIPRLGS----------------------------QIYAMAGMQTRLHLIANE 75 (158)
T ss_dssp EEEEETTSCEEEEEEESS----SCEEEEEGGGTE----------------------------EEEECTTCCEEEEECCSS
T ss_pred eEEeeCCCeEEEEEEcCC----cchhhhhhhcce----------------------------eeccCCCceeeeeeeecC
Confidence 478999999999998753 566554432222 234567888899999999
Q ss_pred ceeeEEEeechhhhhcccE-EEEEEcC
Q 008592 517 PGVWFMHCHLEVHTSWGLK-MAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm-~~~~V~~ 542 (560)
||.|...|..+--..+..| ..+.|.+
T Consensus 76 ~G~y~g~Cae~CG~gH~~M~~~v~vv~ 102 (158)
T d1cyxa_ 76 PGTYDGICAEICGPGHSGMKFKAIATP 102 (158)
T ss_dssp SEEEEEEECSCCSTTSTTCCEEEEEES
T ss_pred CCcEEEEchhhcCcccccCceEEEEEC
Confidence 9999999999876555544 4454444
|