Citrus Sinensis ID: 008637

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------56
MRINRLPSSGHTTPSPPASPRRSPRYRHGRGKPGGRFTPVGPPGRANLAHRLAWLFLSVLLRRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLKPEMDADNSSSDAISTIWKASHKGVEWKPCVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNVYNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTIRPDKRKLALLFDNPNIGWRSFKRQMLSMRSHSDSKGYELKRPSDSPYTFPCPDCMCRANKSNAT
ccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHccEEccccccccccccccccccccccHHHHHHHccccEEEEccccHHHHHHccccccccEEEcccccccHHHHHHHcHHHHHHcccEEEcccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHcccccccHHHHHHHHHHHHHcccccccccccccccHHHHHcccccccHHHHHHHHHHcccccccEEEEEEcccccccccHHHHHHHcccccHHcccccHHHHcccccccccccccEEEEEEcccEEEEcccccccccccccccccccccccEEcccHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
cccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccHHHHccHHHHHHHHHHHcEHHHcccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccEEEEcccHHHHHccccHHHHHHEEHHHHHHHHccHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHHccccccccHcccHHHHHHccccHHHHHHHHHEEEccccEEEEcccccHHHHHHHHHHHHcccccccccccHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
mrinrlpssghttpsppasprrspryrhgrgkpggrftpvgppgraNLAHRLAWLFLSVLLRRQGIFLFAPLIYISGMLLYMGTvsfdvvpvikhrpapgsvyrspqvyaklkpemdadnsssdAISTIWKAshkgvewkpcvkrssgelpesngyisveangglnqqRISICNAVAVAGYLNAtlvipnfhyhsiwrdpskfrdiydedyftsVLQNDVRVVNKIPEYIMERfdhnmsnvynfrvkawspiqfykdeVLPKLLEERLIRIspfanrlsfdappaVQRLRCLANYEalrfsspilTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSccvfdggereKEDMKEARERgwkgkftkpgrvirpgairingkcpltplEVGLMLrgmgfdkntYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLAseeelapfknfssrmaAVDYTVCLHSEVFVttqggnfphflmghrrylygghsktirpdkrklallfdnpnigwrSFKRQMlsmrshsdskgyelkrpsdspytfpcpdcmcranksnat
mrinrlpssghttpsppasprrspryRHGRGKPGGRFTPVGPPGRANLAHRLAWLFLSVLLRRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKhrpapgsvyrspQVYAKLKPEMDADNSSSDAISTIWKashkgvewkpCVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFtsvlqndvrvVNKIPEYIMERFDHNMSNVYNFRVKAWSPIQFYKDEVLPKLLEERLIRISpfanrlsfdapPAVQRLRCLANYEalrfsspilTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDmkearergwkgkftkpgrvirpgairingkcpLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTIRPDKRKLallfdnpnigwrsfkrqMLSMRSHSdskgyelkrpsdspytfpcpdcmcranksnat
MRINRLPSSGHTTpsppasprrsprYRHGRGKPGGRFTPVGPPGRANLAHRLAWLFLSVLLRRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLKPEMDADNSSSDAISTIWKASHKGVEWKPCVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNVYNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTIRPDKRKLALLFDNPNIGWRSFKRQMLSMRSHSDSKGYELKRPSDSPYTFPCPDCMCRANKSNAT
*********************************************ANLAHRLAWLFLSVLLRRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAP**VY***********************STIWKASHKGVEWKPCV***********GYISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNVYNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDG***************WKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEML*****LAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTIRPDKRKLALLFDNPNIGWRSFK******************************************
***************************************************LAWLFLSVLLRRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHR*********************************WKASHKGVEWKPCVK**********GYISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIME*FDHNMSNVYNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILTMGETLVARMKER****GGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARERGWKGKFTK*********IRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTIRPDKRKLALLFDNPNIG*RSF**************************TFPCPDC***A******
***************************HGRGKPGGRFTPVGPPGRANLAHRLAWLFLSVLLRRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLKP*********DAISTIWKASHKGVEWKPCVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNVYNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGE***********RGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTIRPDKRKLALLFDNPNIGWRSFKRQML******************SPYTFPCPDCMCRANKSNAT
********************************************RANLAHRLAWLFLSVLLRRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLKPEMDADNSSSDAISTIWKASHKGVEWKPCVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNVYNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTIRPDKRKLALLFDNPNIGWRSFKRQMLSMRSHSDSKGYELKRPSDSPYTFPCPDCMCRA******
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRINRLPSSGHTTPSPPASPRRSPRYRHGRGKPGGRFTPVGPPGRANLAHRLAWLFLSVLLRRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLKPEMDADNSSSDAISTIWKASHKGVEWKPCVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNVYNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTIRPDKRKLALLFDNPNIGWRSFKRQMLSMRSHSDSKGYELKRPSDSPYTFPCPDCMCRANKSNAT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query558 2.2.26 [Sep-21-2011]
Q8W486519 Uncharacterized protein A no no 0.738 0.793 0.367 1e-68
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 Back     alignment and function desciption
 Score =  261 bits (666), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/435 (36%), Positives = 243/435 (55%), Gaps = 23/435 (5%)

Query: 126 ISTIWKASHKGVEWKPCVKRSSGELP---ESNGYISVEANGGLNQQRISICNAVAVAGYL 182
           +  +W+++  G  W+P     S   P   E+NGY+ V  NGGLNQQR +ICNAV  A  +
Sbjct: 59  VEELWESAKSG-GWRPSSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARIM 117

Query: 183 NATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNVY 242
           NATLV+P    +S W D S F+ IYD ++F   L+ DV++V KIP+ + +         +
Sbjct: 118 NATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVGKIPD-VHKNGKTKKIKAF 176

Query: 243 NFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAP-PAVQRLRCLANYEALRFS 301
             R    +PI++Y    L  + E   I ++PF++RL+ +   P  QRLRC  NY ALRF 
Sbjct: 177 QIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFK 236

Query: 302 SPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARER 361
             I+ + E++V +++ +     G ++S+HLRFE DM+AF+ C       E++ +++ R+ 
Sbjct: 237 PHIMKLSESIVDKLRSQ-----GHFMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKE 291

Query: 362 GWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTM 421
            +  K     R+I     R  GKCPLTP EVGL+LR M FD +T I+LA+G+++  E+ M
Sbjct: 292 NFADK-----RLIY-NERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFM 345

Query: 422 APLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGG--NFPHFL 479
            P   +FP L     +   EEL+         +AVDY VCL S++F+ T  G  NF + L
Sbjct: 346 KPFRTLFPRLDNHSSVDPSEELSATSQ-GLIGSAVDYMVCLLSDIFMPTYDGPSNFANNL 404

Query: 480 MGHRRYLYGGHSKTIRPDKRKLALLFDNPNIGWRS-FKRQMLSMRSHSDSKGYELKRPSD 538
           +GHR  LY G   TIRPD++ LA +F     G R+ F+  +  +   ++  G   +   +
Sbjct: 405 LGHR--LYYGFRTTIRPDRKALAPIFIAREKGKRAGFEEAVRRVMLKTNFGGPHKRVSPE 462

Query: 539 SPYTFPCPDCMCRAN 553
           S YT   P+C C+ N
Sbjct: 463 SFYTNSWPECFCQMN 477

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query558
15226282567 O-fucosyltransferase family protein [Ara 0.989 0.973 0.836 0.0
224111498569 predicted protein [Populus trichocarpa] 0.987 0.968 0.824 0.0
225424244561 PREDICTED: DUF246 domain-containing prot 0.931 0.926 0.859 0.0
297814382567 hypothetical protein ARALYDRAFT_484066 [ 0.989 0.973 0.807 0.0
224099495569 predicted protein [Populus trichocarpa] 0.987 0.968 0.820 0.0
449465763563 PREDICTED: DUF246 domain-containing prot 0.953 0.944 0.835 0.0
255570136570 conserved hypothetical protein [Ricinus 0.989 0.968 0.829 0.0
147801555575 hypothetical protein VITISV_036881 [Viti 0.921 0.893 0.858 0.0
356521550564 PREDICTED: DUF246 domain-containing prot 0.951 0.941 0.819 0.0
356575943564 PREDICTED: DUF246 domain-containing prot 0.951 0.941 0.813 0.0
>gi|15226282|ref|NP_178257.1| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|3785977|gb|AAC67324.1| similar to axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gi|20260420|gb|AAM13108.1| similar to axi 1 protein [Arabidopsis thaliana] gi|22136280|gb|AAM91218.1| similar to axi 1 protein [Arabidopsis thaliana] gi|110742513|dbj|BAE99174.1| similar to axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gi|330250365|gb|AEC05459.1| O-fucosyltransferase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  989 bits (2556), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/556 (83%), Positives = 510/556 (91%), Gaps = 4/556 (0%)

Query: 4   NRLPSSGHTTPSPPASPRRSPRYRHGRGKP--GGRFTPVGPPGRANLAHRLAWLFLSVLL 61
           NRLP SGHTTPSPPASPRRSPRYRHGR K   G RF  V P     LAHRL+W+ LSVLL
Sbjct: 5   NRLPGSGHTTPSPPASPRRSPRYRHGRSKAAAGSRFPTVQP--SRTLAHRLSWILLSVLL 62

Query: 62  RRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLKPEMDADNS 121
           RRQGIFLFAPLIYIS MLLYMGTVSFDVVP+I+ RP PGSVY+SPQVYAKL+PEMDADNS
Sbjct: 63  RRQGIFLFAPLIYISCMLLYMGTVSFDVVPIIQRRPPPGSVYKSPQVYAKLRPEMDADNS 122

Query: 122 SSDAISTIWKASHKGVEWKPCVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGY 181
           ++DAI+TIWK S+KG EWKP V +S+G+LPESNGYI VEANGGLNQQR SICNAVAVAGY
Sbjct: 123 TADAITTIWKHSYKGGEWKPYVNKSTGDLPESNGYIYVEANGGLNQQRTSICNAVAVAGY 182

Query: 182 LNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNV 241
           LNATLVIPNFHYHSIWRDPSKF DIYDE++F S L NDVRVV+ IPEY+MERFDHNM+NV
Sbjct: 183 LNATLVIPNFHYHSIWRDPSKFGDIYDEEFFVSTLSNDVRVVDTIPEYLMERFDHNMTNV 242

Query: 242 YNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFS 301
           YNFRVKAWSPIQ+Y+D +LPKLLEE++IRISPFANRLSFDAP AVQRLRCLANYEAL+FS
Sbjct: 243 YNFRVKAWSPIQYYRDSILPKLLEEKIIRISPFANRLSFDAPQAVQRLRCLANYEALKFS 302

Query: 302 SPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARER 361
             ILT+GETLV RMKE+S NHG KY+SVHLRFEEDMVAFSCC+FDGG +EK+DM  ARER
Sbjct: 303 KTILTLGETLVKRMKEQSANHGAKYVSVHLRFEEDMVAFSCCIFDGGNQEKQDMIAARER 362

Query: 362 GWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTM 421
           GWKGKFTKPGRVIRPGAIR NGKCPLTPLEVGLMLRGMGF+K+TYIFLASG+IY+A +TM
Sbjct: 363 GWKGKFTKPGRVIRPGAIRQNGKCPLTPLEVGLMLRGMGFNKSTYIFLASGEIYDANRTM 422

Query: 422 APLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMG 481
           APL+EMFPNLQTKEMLASEEELAP+KNFSSRMAA+DYTVCLHSEVFVTTQGGNFPHFLMG
Sbjct: 423 APLLEMFPNLQTKEMLASEEELAPYKNFSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLMG 482

Query: 482 HRRYLYGGHSKTIRPDKRKLALLFDNPNIGWRSFKRQMLSMRSHSDSKGYELKRPSDSPY 541
           HRRY++GGHSKTIRPDKRKLA+LFDNPNIGWRSFKRQML+MRSHSDSKG+ELKRP+DS Y
Sbjct: 483 HRRYMFGGHSKTIRPDKRKLAILFDNPNIGWRSFKRQMLNMRSHSDSKGFELKRPNDSIY 542

Query: 542 TFPCPDCMCRANKSNA 557
           TFPCPDCM R NK+  
Sbjct: 543 TFPCPDCMSRRNKTTT 558

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224111498|ref|XP_002315879.1| predicted protein [Populus trichocarpa] gi|222864919|gb|EEF02050.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225424244|ref|XP_002284457.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis vinifera] gi|297737694|emb|CBI26895.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297814382|ref|XP_002875074.1| hypothetical protein ARALYDRAFT_484066 [Arabidopsis lyrata subsp. lyrata] gi|297320912|gb|EFH51333.1| hypothetical protein ARALYDRAFT_484066 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224099495|ref|XP_002311505.1| predicted protein [Populus trichocarpa] gi|222851325|gb|EEE88872.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449465763|ref|XP_004150597.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] gi|449514634|ref|XP_004164435.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255570136|ref|XP_002526030.1| conserved hypothetical protein [Ricinus communis] gi|223534677|gb|EEF36370.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|147801555|emb|CAN77011.1| hypothetical protein VITISV_036881 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356521550|ref|XP_003529417.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information
>gi|356575943|ref|XP_003556095.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query558
TAIR|locus:2049527567 AT2G01480 [Arabidopsis thalian 0.985 0.970 0.819 2e-253
TAIR|locus:2006852562 AT1G14970 [Arabidopsis thalian 0.982 0.975 0.754 1.2e-232
TAIR|locus:2014666568 AT1G35510 [Arabidopsis thalian 0.930 0.913 0.580 2e-166
TAIR|locus:504956200589 AT1G38131 [Arabidopsis thalian 0.910 0.862 0.549 7.1e-148
TAIR|locus:1005716710470 AT1G38065 "AT1G38065" [Arabido 0.724 0.859 0.608 2e-134
TAIR|locus:2029984611 AT1G29200 [Arabidopsis thalian 0.473 0.432 0.394 3.9e-89
TAIR|locus:2079281557 AT3G26370 [Arabidopsis thalian 0.729 0.730 0.428 6e-87
TAIR|locus:2130938549 AT4G16650 [Arabidopsis thalian 0.833 0.846 0.392 3.4e-84
TAIR|locus:2168297504 AT5G65470 [Arabidopsis thalian 0.394 0.436 0.407 4.5e-82
TAIR|locus:2121909519 AT4G24530 [Arabidopsis thalian 0.396 0.425 0.393 2.8e-80
TAIR|locus:2049527 AT2G01480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2440 (864.0 bits), Expect = 2.0e-253, P = 2.0e-253
 Identities = 454/554 (81%), Positives = 499/554 (90%)

Query:     4 NRLPSSGHTTXXXXXXXXXXXXYRHGRGKP--GGRFTPVGPPGRANLAHRLAWLFLSVLL 61
             NRLP SGHTT            YRHGR K   G RF P   P R  LAHRL+W+ LSVLL
Sbjct:     5 NRLPGSGHTTPSPPASPRRSPRYRHGRSKAAAGSRF-PTVQPSRT-LAHRLSWILLSVLL 62

Query:    62 RRQGIFLFAPLIYISGMLLYMGTVSFDVVPVIKHRPAPGSVYRSPQVYAKLKPEMDADNS 121
             RRQGIFLFAPLIYIS MLLYMGTVSFDVVP+I+ RP PGSVY+SPQVYAKL+PEMDADNS
Sbjct:    63 RRQGIFLFAPLIYISCMLLYMGTVSFDVVPIIQRRPPPGSVYKSPQVYAKLRPEMDADNS 122

Query:   122 SSDAISTIWKASHKGVEWKPCVKRSSGELPESNGYISVEANGGLNQQRISICNAVAVAGY 181
             ++DAI+TIWK S+KG EWKP V +S+G+LPESNGYI VEANGGLNQQR SICNAVAVAGY
Sbjct:   123 TADAITTIWKHSYKGGEWKPYVNKSTGDLPESNGYIYVEANGGLNQQRTSICNAVAVAGY 182

Query:   182 LNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFDHNMSNV 241
             LNATLVIPNFHYHSIWRDPSKF DIYDE++F S L NDVRVV+ IPEY+MERFDHNM+NV
Sbjct:   183 LNATLVIPNFHYHSIWRDPSKFGDIYDEEFFVSTLSNDVRVVDTIPEYLMERFDHNMTNV 242

Query:   242 YNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEALRFS 301
             YNFRVKAWSPIQ+Y+D +LPKLLEE++IRISPFANRLSFDAP AVQRLRCLANYEAL+FS
Sbjct:   243 YNFRVKAWSPIQYYRDSILPKLLEEKIIRISPFANRLSFDAPQAVQRLRCLANYEALKFS 302

Query:   302 SPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARER 361
               ILT+GETLV RMKE+S NHG KY+SVHLRFEEDMVAFSCC+FDGG +EK+DM  ARER
Sbjct:   303 KTILTLGETLVKRMKEQSANHGAKYVSVHLRFEEDMVAFSCCIFDGGNQEKQDMIAARER 362

Query:   362 GWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTM 421
             GWKGKFTKPGRVIRPGAIR NGKCPLTPLEVGLMLRGMGF+K+TYIFLASG+IY+A +TM
Sbjct:   363 GWKGKFTKPGRVIRPGAIRQNGKCPLTPLEVGLMLRGMGFNKSTYIFLASGEIYDANRTM 422

Query:   422 APLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMG 481
             APL+EMFPNLQTKEMLASEEELAP+KNFSSRMAA+DYTVCLHSEVFVTTQGGNFPHFLMG
Sbjct:   423 APLLEMFPNLQTKEMLASEEELAPYKNFSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLMG 482

Query:   482 HRRYLYGGHSKTIRPDKRKLALLFDNPNIGWRSFKRQMLSMRSHSDSKGYELKRPSDSPY 541
             HRRY++GGHSKTIRPDKRKLA+LFDNPNIGWRSFKRQML+MRSHSDSKG+ELKRP+DS Y
Sbjct:   483 HRRYMFGGHSKTIRPDKRKLAILFDNPNIGWRSFKRQMLNMRSHSDSKGFELKRPNDSIY 542

Query:   542 TFPCPDCMCRANKS 555
             TFPCPDCM R NK+
Sbjct:   543 TFPCPDCMSRRNKT 556
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2006852 AT1G14970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014666 AT1G35510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956200 AT1G38131 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1005716710 AT1G38065 "AT1G38065" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029984 AT1G29200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2079281 AT3G26370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130938 AT4G16650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168297 AT5G65470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121909 AT4G24530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT2G01480
unknown protein; unknown protein; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF246, plant (InterPro-IPR004348); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G14970.1); Has 431 Blast hits to 423 proteins in 21 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 431; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink). (567 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AGP4
AGP4 (ARABINOGALACTAN PROTEIN 4); Encodes arabinogalactan-protein (AGP4). ; Proteoglycan that s [...] (135 aa)
      • 0.435

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query558
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 1e-156
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 1e-116
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 2e-12
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information 
 Score =  448 bits (1154), Expect = e-156
 Identities = 162/339 (47%), Positives = 210/339 (61%), Gaps = 50/339 (14%)

Query: 156 YISVEANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSKFRDIYDEDYFTSV 215
           Y+ V ANGGLNQQR  IC+AVAVA  LNATLV+P    +S+W D SKF DIYD D+F   
Sbjct: 1   YLLVSANGGLNQQRSQICDAVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKS 60

Query: 216 LQNDVRVVNKIPEYIMERFDHNMSNVYNFRVKAWSPIQFYKDEVLPKLLEERLIRISPFA 275
           L++DVRVV K+PE +  +       +   RV + S   +Y +EVLP L +  +IR++PF 
Sbjct: 61  LKDDVRVVKKLPEELASKKPE----ITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFD 116

Query: 276 NRLSFDA-PPAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFE 334
           +RL+ D  PP +QRLRC  N+ ALRF   I  +G+ LV R++E     GG ++++HLRFE
Sbjct: 117 SRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLRE----AGGPFLALHLRFE 172

Query: 335 EDMVAFSCCVFDGGEREKEDMKEARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGL 394
           +DM+AFS C                                       GKCPLTP EVGL
Sbjct: 173 KDMLAFSGC---------------------------------------GKCPLTPEEVGL 193

Query: 395 MLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFKNFSSRMA 454
           +LR +GF ++T I+LA+G+IY  E+ + PL  +FPNL TKE LA+ EELAPF   SSR+A
Sbjct: 194 LLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELAPFSGHSSRLA 253

Query: 455 AVDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKT 493
           A+DY VCL S+VFV T GGNF   + GHRRYL  GH KT
Sbjct: 254 ALDYIVCLESDVFVPTYGGNFAKAVAGHRRYL--GHRKT 290

Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290
>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 558
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 97.32
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 94.98
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information 
Probab=100.00  E-value=7e-56  Score=450.21  Aligned_cols=306  Identities=36%  Similarity=0.602  Sum_probs=208.0

Q ss_pred             ecCchhHHHHHHHHHHHHHHHhcceEEecccCCCccccCCCC-----CCcccChHHHHHhccccccccccCchhHHHhhc
Q 008637          161 ANGGLNQQRISICNAVAVAGYLNATLVIPNFHYHSIWRDPSK-----FRDIYDEDYFTSVLQNDVRVVNKIPEYIMERFD  235 (558)
Q Consensus       161 ~nGGLNQqR~~IcDaVavArlLNATLVlP~l~~~s~W~D~S~-----F~dIFD~dhFI~sL~~dVrIVk~LP~~l~~~~~  235 (558)
                      |.||+||||.++++||++|++||+|||||.+.....|+|.++     |+++||+++|++.++++|.+.+.+|..+...+.
T Consensus         6 ~~GGfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~   85 (351)
T PF10250_consen    6 CMGGFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFR   85 (351)
T ss_dssp             -SSSHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccc
Confidence            899999999999999999999999999999999999999988     999999999999999999999998876543211


Q ss_pred             ccC-------------------------Cccccccccc-CCChhhHHhhcchhhhcc------ceEEEcCCCccccCC-C
Q 008637          236 HNM-------------------------SNVYNFRVKA-WSPIQFYKDEVLPKLLEE------RLIRISPFANRLSFD-A  282 (558)
Q Consensus       236 ~~~-------------------------~~~~~~~~~~-~s~~~yY~~~VlP~l~k~------~vi~l~~f~~rLa~~-l  282 (558)
                      ...                         .......... |+.+.+|.++++|.+.++      +++.|.++...+..+ .
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  165 (351)
T PF10250_consen   86 LQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYL  165 (351)
T ss_dssp             EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GG
T ss_pred             hhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhccc
Confidence            100                         0111222333 788899999999999887      999999999999886 7


Q ss_pred             CchhhhhhccccccccccchhHHHHHHHHHHHHHhccccCCCceEEEeeccchhhhhhcccccCCChhHHHHHHHHHHhc
Q 008637          283 PPAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARERG  362 (558)
Q Consensus       283 P~~iQrLRCrvnf~ALrF~~~I~~lg~~LV~Rmr~~s~~~~g~yiAlHLRfE~DMlAfsgC~~~~~~~E~~eL~~~R~~~  362 (558)
                      +.++|+        +|+|+++|+++|+++|++|+.    .+++|||+|||+|+||  +++|.+++   ++..|..+|.. 
T Consensus       166 ~~~~~r--------~l~~~~~i~~~a~~~i~~~~~----~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~~-  227 (351)
T PF10250_consen  166 DRDLQR--------YLRFSPEIRELADKFIKRLLA----GGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRCW-  227 (351)
T ss_dssp             GGGGGG--------G--B-HHHHHHHHHHHHHH--------SSEEEEEE--SHHH--HHHHCT-T-------TTTHHHH-
T ss_pred             CccceE--------EEecCHHHHHHHHHHHHHhhc----ccCceEEEeecccCch--HhhcccCC---chHHHHHhHhh-
Confidence            888887        999999999999999999993    4689999999999999  89999955   66778777754 


Q ss_pred             cccccCCCCcccCchhhhcCCCCCCCHHHHHHHHhhcCCCCCcEEEEeeccccCccccchhHHHhCCcccccccCCChhh
Q 008637          363 WKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEE  442 (558)
Q Consensus       363 w~~k~~~~~~~i~~~~~R~~G~CPLTPeEvgl~LralGf~~~T~IYlAsGeiyGg~~~m~pL~~~FPnl~tKe~L~s~eE  442 (558)
                       ..      +.+++.+.+..+.||++|++++.+++++|+.+.|.||||++++|||++.|.+|+++||++++|+++.+.+|
T Consensus       228 -~~------~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~  300 (351)
T PF10250_consen  228 -GK------KSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEE  300 (351)
T ss_dssp             --G------GGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--
T ss_pred             -cc------ccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHH
Confidence             11      14677788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccccccccccceeeeeecCcceeecCCCChhhhhhhhcccccCCccce
Q 008637          443 LAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKT  493 (558)
Q Consensus       443 L~pf~~~ss~~AALDYiVcl~SDVFv~t~~GNfa~~V~GhR~y~~~G~~kT  493 (558)
                      +++|.+  +++|+||++||++||+||+|..++|+.+|+++|+|.+..++||
T Consensus       301 ~~~~~~--~~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~~~~~  349 (351)
T PF10250_consen  301 LEPLND--DQLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKPKRKS  349 (351)
T ss_dssp             S-------S--HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS---E
T ss_pred             hhhccc--cchhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCCCCCC
Confidence            999976  8999999999999999999998899999999999984444344

Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.
>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query558
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 9e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Length = 362 Back     alignment and structure
 Score = 53.2 bits (127), Expect = 9e-08
 Identities = 58/386 (15%), Positives = 101/386 (26%), Gaps = 78/386 (20%)

Query: 152 ESNGYISVEAN-GGLNQQRISICNAVAVAGYLNATLVIPNF-HYHSIWRDPSKFRDIYDE 209
           + NGYI      G    Q       +A A  L+ TLV+PNF  +         F  ++  
Sbjct: 6   DPNGYIVFCPCMGRFGNQVDQFLGVLAFAKALDRTLVLPNFIEFKHPETKMIPFEFLFQV 65

Query: 210 DY------------FTSVLQNDVRVVNK----IPEYIMERFDHNMSNVY-----NFRVKA 248
                         FT  +   V    K            +D +          N     
Sbjct: 66  GTVAKYTRVVTMQEFTKKIMPTVWPPEKRKAFCWTPRQAIYDKSAEPGCHSKEGNPFGPY 125

Query: 249 WS--PIQFYKDEVLPKLLEERLIRISPFANRLSFDAPPAVQRLRCLANYEA--------- 297
           W    + F  DE    +     +       +     P   +    LA   A         
Sbjct: 126 WDQIDVSFVGDEYFGDIPGGFDLNQMGSRKKWLEKFPS--EEYPVLAFSSAPAPFPSKGK 183

Query: 298 -------LRFSSPILTMGETLVARMKERSVNHGGKYISVHLRFEEDMVAFSCCVFDGGER 350
                  LR+SS I    +      K  S N    +++VHLR + D V    C       
Sbjct: 184 VWSIQKYLRWSSRITEQAK------KFISANLAKPFVAVHLRNDADWVRV--CEHIDTTT 235

Query: 351 EKEDMKEARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKN-TYIFL 409
            +      +  G         + I          C  +  ++   +           +F+
Sbjct: 236 NRPLFASEQCLGEGHHLGTLTKEI----------CSPSKQQILEQIVEKVGSIGAKSVFV 285

Query: 410 ASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVT 469
           AS    + +  +  + E     + +                         +   +++FV 
Sbjct: 286 AS----DKDHMIDEINEALKPYEIEA-----------HRQEPDDMYTSLAIMGRADLFVG 330

Query: 470 TQGGNFPHFLMGHRRYLYGGHSKTIR 495
                F H +   R +  G   +   
Sbjct: 331 NCVSTFSHIVKRERDHA-GQSPRPSA 355
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query558
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 99.51
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 99.09
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 97.38
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 97.23
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=99.51  E-value=3.5e-14  Score=148.25  Aligned_cols=296  Identities=17%  Similarity=0.238  Sum_probs=163.0

Q ss_pred             CCCCceEEEEec-C-chhHHHHHHHHHHHHHHHhcce----EEecccCCCccccCC------CCCCcccChHHHHHhccc
Q 008637          151 PESNGYISVEAN-G-GLNQQRISICNAVAVAGYLNAT----LVIPNFHYHSIWRDP------SKFRDIYDEDYFTSVLQN  218 (558)
Q Consensus       151 ~~snGYl~V~~n-G-GLNQqR~~IcDaVavArlLNAT----LVlP~l~~~s~W~D~------S~F~dIFD~dhFI~sL~~  218 (558)
                      ...++||+-..| | |.|.||...-.|.+.|+.||.|    ||||-...---|+-.      -.|++.||++++    +.
T Consensus        19 ~~~~rYl~y~~~~g~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~~h~~~~~~~~~~ipf~~fFDv~~L----~~   94 (408)
T 4ap5_A           19 ASRRRYLLYDVNPPEGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSL----NK   94 (408)
T ss_dssp             -CCCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCSCGGGSTTSCCCSBCGGGTBCHHHH----HT
T ss_pred             ccccceEEecCCCCCcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCcccccccCCcccceeccHHHhcCHHHH----Hh
Confidence            456899998864 5 8999999999999999999999    999966432335533      249999999865    55


Q ss_pred             cccccccCchhHHHhhcccCCccccc-ccc----c-----C-----------------------CChhhHHhhcchhhhc
Q 008637          219 DVRVVNKIPEYIMERFDHNMSNVYNF-RVK----A-----W-----------------------SPIQFYKDEVLPKLLE  265 (558)
Q Consensus       219 dVrIVk~LP~~l~~~~~~~~~~~~~~-~~~----~-----~-----------------------s~~~yY~~~VlP~l~k  265 (558)
                      .|+||.-  +++++..+...  +..+ ..+    .     |                       .++.|=...|.  ...
T Consensus        95 ~vpVI~m--eeFl~~~~~~~--~~~v~~l~~~~~~~~~~~~~~k~~~~~c~~~~~~~~~~~~~~~gpfw~~~~v~--~~~  168 (408)
T 4ap5_A           95 NIPVIEY--EQFIAESGGPF--IDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETR--GLN  168 (408)
T ss_dssp             TSCEEEH--HHHHHHSSSSE--EEEEEEEECCTTCCCTTCCCCCEEEECCSSCCSCEECTTSCEECCGGGCTTCE--EEE
T ss_pred             hCCeeEH--HHHHHHhCCCC--CcceeeccccHhhcccccccchhhhhhhhhccccccccccCccCCcccccccc--cCC
Confidence            6677654  44443221100  0000 000    0     0                       01111000000  011


Q ss_pred             cceEEEcCCCccccC-----------------CCC------chhhhhhccccccccccchhHHHHHHHHHHHHHhccccC
Q 008637          266 ERLIRISPFANRLSF-----------------DAP------PAVQRLRCLANYEALRFSSPILTMGETLVARMKERSVNH  322 (558)
Q Consensus       266 ~~vi~l~~f~~rLa~-----------------~lP------~~iQrLRCrvnf~ALrF~~~I~~lg~~LV~Rmr~~s~~~  322 (558)
                      ..-+.+.+..+.+..                 .+|      .+...+     -..|+|.+.|.+.|++.++..-.     
T Consensus       169 ~~c~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~-----~r~l~~s~~l~~~a~~fi~~~L~-----  238 (408)
T 4ap5_A          169 VSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDT-----RRSMVFARHLREVGDEFRSRHLN-----  238 (408)
T ss_dssp             EEEEEECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHH-----HHTCCBCHHHHHHHHHHHHHHHC-----
T ss_pred             ceeEEEeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhH-----HHHhhhhHHHHHHHHHHHHHHhC-----
Confidence            111122221111110                 000      111111     13699999999999998886642     


Q ss_pred             CCceEEEeeccchhhhhhcccccCCChhHHHHHHHHHHhccccccCCCCcccCchhhhcCC-CCCCCHHHHHHHHhhcCC
Q 008637          323 GGKYISVHLRFEEDMVAFSCCVFDGGEREKEDMKEARERGWKGKFTKPGRVIRPGAIRING-KCPLTPLEVGLMLRGMGF  401 (558)
Q Consensus       323 ~g~yiAlHLRfE~DMlAfsgC~~~~~~~E~~eL~~~R~~~w~~k~~~~~~~i~~~~~R~~G-~CPLTPeEvgl~LralGf  401 (558)
                       ++|+++|+|.+.|+...  |.......         ...+..-+.+.+     +-..... .+|-.++-+..+.+.|-=
T Consensus       239 -~~~~~~h~r~~~dw~~~--~~~~~~~~---------~~~y~~~H~Rr~-----d~~~~~~~~~ps~~~~~~~i~~~~~~  301 (408)
T 4ap5_A          239 -STDDADRIPFQEDWMKM--KVKLGSAL---------GGPYLGVHLRRK-----DFIWGHRQDVPSLEGAVRKIRSLMKT  301 (408)
T ss_dssp             -CCTTTTTCCCCSSGGGC--CCCTTCBC---------CEEEEEEEECCT-----TTTTTTCSSSCCHHHHHHHHHHHHHH
T ss_pred             -cccceeecccchhHhhh--hccccccc---------CCCccccccccc-----cchhhhhccCCCHHHHHHHHHHHHHh
Confidence             36666666666666543  32211100         000111110000     0000111 223332222323322222


Q ss_pred             CCCcEEEEeeccccCccccchhHHHhCCcccccccCCChhhhccccccccccccceeeeeecCcceeecCCCChhhhhhh
Q 008637          402 DKNTYIFLASGKIYNAEKTMAPLIEMFPNLQTKEMLASEEELAPFKNFSSRMAAVDYTVCLHSEVFVTTQGGNFPHFLMG  481 (558)
Q Consensus       402 ~~~T~IYlAsGeiyGg~~~m~pL~~~FPnl~tKe~L~s~eEL~pf~~~ss~~AALDYiVcl~SDVFv~t~~GNfa~~V~G  481 (558)
                      .+-+.||||+-+   .+..+..|++.+|.++.-..  ..+++..+  .....|.||-+||.+||+||+|..++|+..|.=
T Consensus       302 ~~~~~VyiATD~---~~~~~~~l~~~~~~~~~~~~--~~~~~~~~--~d~~~a~idq~Ic~~a~~FiGt~~StfS~~I~~  374 (408)
T 4ap5_A          302 HRLDKVFVATDA---VRKEYEELKKLLPEMVRFEP--TWEELELY--KDGGVAIIDQWICAHARFFIGTSVSTFSFRIHE  374 (408)
T ss_dssp             HTCSCEEEEECC---CHHHHHHHHHHCTTEECCCC--CHHHHHHH--HHHHHHHHHHHHHHTEEEEEBCTTCHHHHHHHH
T ss_pred             cCCCEEEEeCCC---chhHHHHHHHhCCCcEEecC--cchhhhcc--CcchhhHHHHHHHHhCCeeEeCCcCchhHHHHH
Confidence            244569999875   34457889999987764322  23445444  234679999999999999999999999999999


Q ss_pred             hcccccCCccc
Q 008637          482 HRRYLYGGHSK  492 (558)
Q Consensus       482 hR~y~~~G~~k  492 (558)
                      .|-++  |+.+
T Consensus       375 eR~~~--G~~~  383 (408)
T 4ap5_A          375 EREIL--GLDP  383 (408)
T ss_dssp             HHHHH--TBCG
T ss_pred             HHHhc--CCCC
Confidence            99987  8753
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00