Citrus Sinensis ID: 008697

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------
MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
cccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccEEccccHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHcHHHcccccEEEEEEEEccEEEEEEccccccccccccEEEEEEEEEEccccccccccccccccEEEcccccccccccccccccEEEEccccEEEEEEEccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccc
ccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHccccEEEEEEcccEEEEEEEEEcccccccccEEEEEEEEEEcccccccEEEcccccccEEccccccEEEEcccccccEEEEccccEEEEEEcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHccccHccccHHHHHccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccc
mewwthlwlNEGFATWVSYLAADSLFPEWKIWTQFLDECTEglrldglaeshpievevnhtgeidEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALeegsgepvnKLMNSwtkqkgypvisvKVKEEKLELeqsqflssgspgdgqwivpitlccgsydvcknfllynksdsfdikELLGcsiskegdnggwiklnvnqtgfyrvkYDKDLAARLGYAIEMKQlsetdrfgildDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAeklgwdskpgeshlDALLRGEIFTALALLGHKETLNEASKRFHAFLadrttpllppdiRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSivspfasyEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEvevnhtgeidEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQflssgspgdgQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCsiskegdnggwIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQkvsasdrsgyeSLLRVYRETDLSQEKTRILsslascpdVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVesirneghlaeavkelayrky
MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVIsvkvkeekleleqsqflssGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
**WWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEE*****VNKLMNSWTKQKGYPVISVKV*******************DGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAV********
MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCK*****TLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR**
MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRK*
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MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query557 2.2.26 [Sep-21-2011]
Q11011920 Puromycin-sensitive amino yes no 0.947 0.573 0.390 1e-107
P55786919 Puromycin-sensitive amino yes no 0.935 0.566 0.393 1e-105
P37898856 Alanine/arginine aminopep yes no 0.937 0.609 0.312 2e-73
P32454952 Aminopeptidase 2, mitocho no no 0.938 0.549 0.305 1e-69
Q59KZ1924 Aminopeptidase 2 OS=Candi N/A no 0.929 0.560 0.313 4e-66
Q9USX1882 Aminopeptidase 1 OS=Schiz yes no 0.935 0.590 0.296 1e-65
Q95334942 Glutamyl aminopeptidase O no no 0.931 0.550 0.313 1e-65
Q32LQ0956 Glutamyl aminopeptidase O no no 0.937 0.546 0.310 1e-64
Q07075957 Glutamyl aminopeptidase O no no 0.935 0.544 0.309 6e-64
Q974N6781 Probable aminopeptidase 2 yes no 0.868 0.619 0.305 7e-63
>sp|Q11011|PSA_MOUSE Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1 SV=2 Back     alignment and function desciption
 Score =  388 bits (997), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/558 (39%), Positives = 317/558 (56%), Gaps = 30/558 (5%)

Query: 1   MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLD-ECTEGLRLDGLAESHPIEVEVN 59
           MEWWTHLWLNEGFA+W+ YL  D  FPE+ IWTQF+  + T    LD L  SHPIEV V 
Sbjct: 366 MEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVG 425

Query: 60  HTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEE 119
           H  E+DEIFDAISY KGASVIRML +Y+G + F++ +  Y+ K+   NA TEDLW +LE 
Sbjct: 426 HPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWESLES 485

Query: 120 GSGEPVNKLMNSWTKQKGYPVISVKVKEEK----LELEQSQFLSSGSPGD---GQWIVPI 172
            SG+P+  +MN+WTKQ G+P+I V+ ++ +    L+L Q +F +SG  G     QW+VPI
Sbjct: 486 ASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRVLKLSQKKFCASGPYGGEDCPQWMVPI 545

Query: 173 TLCCG-SYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKD 231
           T+      +  K  +L +K +           + K      W+KLN+   GFYR +Y   
Sbjct: 546 TISTSEDPNQAKLKILMDKPEM--------SVVLKNVKPDQWVKLNLGTVGFYRTQYSSA 597

Query: 232 LAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLI 291
           +   L   I    L   DR G+ +D F+L  A   +   +L +M ++  E  YTV S+L 
Sbjct: 598 MLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDL- 656

Query: 292 TISYKIGRIAA-DARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTAL 350
             S  +G ++   +  +  + +++F   +F    E+LGWD KPGE HLDALLRG +   L
Sbjct: 657 --SCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKL 714

Query: 351 ALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYR 410
              GHK TL EA +RF   +  +   +L  D+R   Y+ V++     D +  + +L++++
Sbjct: 715 GKAGHKATLEEARRRFKEHVEGKQ--ILSADLRSPVYLTVLKH---GDGATLDIMLKLHK 769

Query: 411 ETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVY---GLA-VSIEGRETAW 466
           + D+ +EK RI   L +     ++ +VL F LS EVR QD V    G+A  S  GR+ AW
Sbjct: 770 QADMQEEKNRIERVLGATLSPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKHGRKAAW 829

Query: 467 KWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSI 526
           K++KDNW+ +   +  GFLI+R I   V  FA  +   EV+ FF S   P   RT++Q  
Sbjct: 830 KFIKDNWEELHNRYQGGFLISRLIKLSVEGFAVDKMAGEVKAFFESHPAPSAERTIQQCC 889

Query: 527 ERVQINAKWVESIRNEGH 544
           E + +NA W++   +  H
Sbjct: 890 ENILLNAAWLKRDADSIH 907
Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 4
>sp|P55786|PSA_HUMAN Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1 SV=2 Back     alignment and function description
>sp|P37898|AAP1_YEAST Alanine/arginine aminopeptidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AAP1 PE=1 SV=2 Back     alignment and function description
>sp|P32454|APE2_YEAST Aminopeptidase 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APE2 PE=1 SV=4 Back     alignment and function description
>sp|Q59KZ1|APE2_CANAL Aminopeptidase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=APE2 PE=1 SV=2 Back     alignment and function description
>sp|Q9USX1|APE1_SCHPO Aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ape1 PE=3 SV=1 Back     alignment and function description
>sp|Q95334|AMPE_PIG Glutamyl aminopeptidase OS=Sus scrofa GN=ENPEP PE=1 SV=1 Back     alignment and function description
>sp|Q32LQ0|AMPE_BOVIN Glutamyl aminopeptidase OS=Bos taurus GN=ENPEP PE=2 SV=1 Back     alignment and function description
>sp|Q07075|AMPE_HUMAN Glutamyl aminopeptidase OS=Homo sapiens GN=ENPEP PE=1 SV=3 Back     alignment and function description
>sp|Q974N6|APE2_SULTO Probable aminopeptidase 2 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=ape2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query557
225429582 880 PREDICTED: puromycin-sensitive aminopept 1.0 0.632 0.811 0.0
147772895 880 hypothetical protein VITISV_012143 [Viti 1.0 0.632 0.809 0.0
343887278 911 aminopeptidase [Citrus unshiu] 0.922 0.564 0.788 0.0
255550101 870 puromycin-sensitive aminopeptidase, puta 0.991 0.634 0.786 0.0
356507019 873 PREDICTED: puromycin-sensitive aminopept 0.994 0.634 0.750 0.0
356514669 873 PREDICTED: puromycin-sensitive aminopept 0.994 0.634 0.748 0.0
357465783 876 Puromycin-sensitive aminopeptidase [Medi 1.0 0.635 0.739 0.0
449486688 886 PREDICTED: LOW QUALITY PROTEIN: puromyci 1.0 0.628 0.728 0.0
22329112 879 aminopeptidase M1 [Arabidopsis thaliana] 0.992 0.629 0.738 0.0
297798638 879 hypothetical protein ARALYDRAFT_491378 [ 0.992 0.629 0.734 0.0
>gi|225429582|ref|XP_002280239.1| PREDICTED: puromycin-sensitive aminopeptidase [Vitis vinifera] gi|296081675|emb|CBI20680.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  956 bits (2471), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/561 (81%), Positives = 501/561 (89%), Gaps = 4/561 (0%)

Query: 1   MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNH 60
           MEWWTHLWLNEGFATWVSYLAADSLFPEWK+WTQFLDE TEGLRLDGLAESHPIEVE+NH
Sbjct: 320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKVWTQFLDESTEGLRLDGLAESHPIEVEINH 379

Query: 61  TGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG 120
            GEIDEIFDAISYRKGASVIRMLQ+YLGAECFQRSLASYIKK+ACSNAKTEDLWAALEEG
Sbjct: 380 AGEIDEIFDAISYRKGASVIRMLQSYLGAECFQRSLASYIKKHACSNAKTEDLWAALEEG 439

Query: 121 SGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYD 180
           SGEPVN+LMNSWTKQKGYPV+SVK+  +KLE EQ+QFLSSGS GDGQWIVPITLCCGSYD
Sbjct: 440 SGEPVNRLMNSWTKQKGYPVVSVKINNQKLEFEQTQFLSSGSQGDGQWIVPITLCCGSYD 499

Query: 181 VCKNFLLYNKSDSFDIKELLGCSISKEGDNG----GWIKLNVNQTGFYRVKYDKDLAARL 236
              NFLL  KS+S D+KE LGC +    DN      WIKLNV+QTGFYRVKYD+ LAA L
Sbjct: 500 TPHNFLLQTKSESLDMKEFLGCCVGGGNDNSIAVCSWIKLNVDQTGFYRVKYDEKLAAGL 559

Query: 237 GYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYK 296
             AIE   LS TDRFGILDD FALCMA QQ+LTSLLTLM +Y EE +YTVLSNLI+ISYK
Sbjct: 560 RSAIEKNYLSATDRFGILDDSFALCMACQQSLTSLLTLMGAYREELDYTVLSNLISISYK 619

Query: 297 IGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHK 356
           + RIAADA PEL+DY+K+FFISLFQ SAEKLGW+ +PGE HLDA+LRGE+ TALA+ GH 
Sbjct: 620 VARIAADATPELVDYIKEFFISLFQYSAEKLGWEPRPGEGHLDAMLRGEVLTALAVFGHD 679

Query: 357 ETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQ 416
            T+NEAS+RFHAFL DR TP+LPPDIRKAAYVAVMQ V+ S+RSGYESLLRVYRETDLSQ
Sbjct: 680 LTINEASRRFHAFLDDRNTPVLPPDIRKAAYVAVMQNVTTSNRSGYESLLRVYRETDLSQ 739

Query: 417 EKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHI 476
           EKTRIL SLASCPD NIVLEVLNF+LSSEVRSQDAV+GLAVS EGRETAW WLK+NWD+I
Sbjct: 740 EKTRILGSLASCPDPNIVLEVLNFVLSSEVRSQDAVFGLAVSREGRETAWSWLKNNWDYI 799

Query: 477 SKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWV 536
           SKTWGSGFLITRF+S+IVSPFAS+EK  EV+EFF++R KP IARTL+QSIERV INAKWV
Sbjct: 800 SKTWGSGFLITRFVSAIVSPFASFEKASEVQEFFATRTKPSIARTLKQSIERVHINAKWV 859

Query: 537 ESIRNEGHLAEAVKELAYRKY 557
           ESI+NE HLA+A+KELAYRKY
Sbjct: 860 ESIQNEKHLADAMKELAYRKY 880

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147772895|emb|CAN73668.1| hypothetical protein VITISV_012143 [Vitis vinifera] Back     alignment and taxonomy information
>gi|343887278|dbj|BAK61824.1| aminopeptidase [Citrus unshiu] Back     alignment and taxonomy information
>gi|255550101|ref|XP_002516101.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] gi|223544587|gb|EEF46103.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356507019|ref|XP_003522269.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356514669|ref|XP_003526026.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] Back     alignment and taxonomy information
>gi|357465783|ref|XP_003603176.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] gi|355492224|gb|AES73427.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449486688|ref|XP_004157369.1| PREDICTED: LOW QUALITY PROTEIN: puromycin-sensitive aminopeptidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|22329112|ref|NP_195035.2| aminopeptidase M1 [Arabidopsis thaliana] gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana] gi|24209879|gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana] gi|29028734|gb|AAO64746.1| At4g33090/F4I10_20 [Arabidopsis thaliana] gi|110742477|dbj|BAE99157.1| aminopeptidase like protein [Arabidopsis thaliana] gi|332660772|gb|AEE86172.1| aminopeptidase M1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297798638|ref|XP_002867203.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] gi|297313039|gb|EFH43462.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query557
TAIR|locus:2125904879 APM1 "aminopeptidase M1" [Arab 0.992 0.629 0.713 7.6e-215
ZFIN|ZDB-GENE-060524-3925 npepps "aminopeptidase puromyc 0.947 0.570 0.388 4.4e-100
FB|FBgn02612431075 Psa "Puromycin sensitive amino 0.944 0.489 0.385 1.5e-99
UNIPROTKB|F1P456837 NPEPPS "Uncharacterized protei 0.951 0.633 0.381 1.5e-97
MGI|MGI:1101358920 Npepps "aminopeptidase puromyc 0.933 0.565 0.385 1.6e-95
UNIPROTKB|E1BP91921 NPEPPS "Uncharacterized protei 0.935 0.565 0.384 2.6e-95
UNIPROTKB|F1M9V7920 Npepps "Protein Npepps" [Rattu 0.933 0.565 0.385 3.3e-95
UNIPROTKB|F1RWJ6923 LOC414413 "Uncharacterized pro 0.935 0.564 0.382 4.2e-95
UNIPROTKB|F1P7M0860 NPEPPS "Uncharacterized protei 0.935 0.605 0.382 6.8e-95
UNIPROTKB|B7Z463839 NPEPPS "cDNA FLJ53354, highly 0.935 0.620 0.384 8.7e-95
TAIR|locus:2125904 APM1 "aminopeptidase M1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2076 (735.8 bits), Expect = 7.6e-215, P = 7.6e-215
 Identities = 398/558 (71%), Positives = 458/558 (82%)

Query:     1 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNH 60
             MEWWTHLWLNEGFATWVSYLA DSLFPEWKIWTQFLDE TEGLRLDGL ESHPIEVEVNH
Sbjct:   320 MEWWTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTEGLRLDGLEESHPIEVEVNH 379

Query:    61 TGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG 120
               EIDEIFDAISYRKGASVIRMLQ+YLGAE FQ+SLA+YIK +A SNAKTEDLWAALE G
Sbjct:   380 AAEIDEIFDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWAALEAG 439

Query:   121 SGEPVNKLMNSWTKQKGYPVIXXXXXXXXXXXXXXXXXXXGSPGDGQWIVPITLCCGSYD 180
             SGEPVNKLM+SWTKQKGYPV+                   GSPG+GQWIVP+TLCCGSY+
Sbjct:   440 SGEPVNKLMSSWTKQKGYPVVSAKIKDGKLELEQSRFLSSGSPGEGQWIVPVTLCCGSYE 499

Query:   181 VCKNFLLYNKSDSFDIKELLGCSISKEGD--NG--GWIKLNVNQTGFYRVKYDKDLAARL 236
               KNFLL +KS ++D+KELLGCSI+   D  NG   WIK+NV+Q GFYRVKYD  LAA L
Sbjct:   500 KRKNFLLESKSGAYDLKELLGCSIADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGL 559

Query:   237 GYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYK 296
               A E + L+  DR+GILDD FAL MARQQ+L SLLTL ++Y +E +YTVLSNLI ISYK
Sbjct:   560 RNATESQSLTSIDRYGILDDSFALTMARQQSLASLLTLCSAYKKELDYTVLSNLIAISYK 619

Query:   297 IGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHK 356
             + +I ADA  EL+  +K FFI +FQ +A KLGWD K GESHLDA+LRGE+ TALA+ GH 
Sbjct:   620 VVKIGADANQELMSGIKHFFIGVFQFAAGKLGWDPKQGESHLDAMLRGEVLTALAVFGHD 679

Query:   357 ETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQ 416
             ETL EA +RF AFLADR TPLLPPDIR+AAYVAVMQ+ + SD+SGYESLLRVYRETDLSQ
Sbjct:   680 ETLKEAVRRFDAFLADRNTPLLPPDIRRAAYVAVMQRANKSDKSGYESLLRVYRETDLSQ 739

Query:   417 EKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLA-VSIEGRETAWKWLKDNWDH 475
             EKTRIL SLASCPD  IV +VLNF+LS EVR+QDA+YGL+ VS EGRE AWKWL++ W++
Sbjct:   740 EKTRILGSLASCPDPTIVQDVLNFVLSDEVRNQDALYGLSGVSWEGREVAWKWLQEKWEY 799

Query:   476 ISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKW 535
             I  TWGSGFLITRFIS++VSPFAS+EK +EVEEFF++R KP +ARTL+QSIERV INA W
Sbjct:   800 IGNTWGSGFLITRFISAVVSPFASFEKAKEVEEFFATRSKPSMARTLKQSIERVHINANW 859

Query:   536 VESIRNEGHLAEAVKELA 553
             VESI+ E +L + V +L+
Sbjct:   860 VESIKKEDNLTQLVAQLS 877
GO:0004177 "aminopeptidase activity" evidence=IEA;IDA
GO:0005634 "nucleus" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009926 "auxin polar transport" evidence=TAS
GO:0005829 "cytosol" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0010359 "regulation of anion channel activity" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
ZFIN|ZDB-GENE-060524-3 npepps "aminopeptidase puromycin sensitive" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0261243 Psa "Puromycin sensitive aminopeptidase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1P456 NPEPPS "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1101358 Npepps "aminopeptidase puromycin sensitive" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BP91 NPEPPS "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1M9V7 Npepps "Protein Npepps" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RWJ6 LOC414413 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1P7M0 NPEPPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z463 NPEPPS "cDNA FLJ53354, highly similar to Puromycin-sensitive aminopeptidase (EC 3.4.11.-)" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00032225001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (877 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00010470001
SubName- Full=Chromosome chr17 scaffold_263, whole genome shotgun sequence; (386 aa)
   • •  0.427
GSVIVG00014791001
SubName- Full=Putative uncharacterized protein (Chromosome chr18 scaffold_1, whole genome shotg [...] (309 aa)
   • •  0.411

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query557
cd09601446 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f 6e-72
COG0308859 COG0308, PepN, Aminopeptidase N [Amino acid transp 4e-68
pfam11838323 pfam11838, DUF3358, Domain of unknown function (DU 5e-61
cd09602438 cd09602, M1_APN_3, Peptidase M1 family containing 4e-32
pfam01433390 pfam01433, Peptidase_M1, Peptidase family M1 2e-27
TIGR02412831 TIGR02412, pepN_strep_liv, aminopeptidase N, Strep 9e-26
cd09595407 cd09595, M1, Peptidase M1 family contains aminopep 2e-20
cd09603415 cd09603, M1_APN_4, Peptidase M1 family Aminopeptid 7e-19
TIGR02414863 TIGR02414, pepN_proteo, aminopeptidase N, Escheric 8e-13
cd09600861 cd09600, M1_APN_1, Peptidase M1 family containing 3e-11
cd09604435 cd09604, M1_APN_5, Peptidase M1 family containing 8e-11
PRK14015875 PRK14015, pepN, aminopeptidase N; Provisional 6e-08
pfam13485128 pfam13485, Peptidase_MA_2, Peptidase MA superfamil 7e-08
cd09599442 cd09599, M1_LTA4H, Peptidase M1 family contains le 5e-04
>gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ) Back     alignment and domain information 
 Score =  236 bits (605), Expect = 6e-72
 Identities = 80/142 (56%), Positives = 100/142 (70%), Gaps = 3/142 (2%)

Query: 1   MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQF-LDECTEGLRLDGLAESHPIEVEVN 59
           M+WW  LWLNEGFAT++ YL  D L PEW +W QF LD+    L LD LA SHPI V V 
Sbjct: 305 MKWWDDLWLNEGFATYMEYLGVDHLEPEWNMWDQFVLDDLQSALALDSLASSHPISVPVE 364

Query: 60  HTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEE 119
              EI EIFDAISY KGASV+RML+++LG E F++ L +Y+KK+A  NA T+DLW AL E
Sbjct: 365 TPDEISEIFDAISYSKGASVLRMLEHFLGEEVFRKGLRNYLKKHAYGNATTDDLWEALSE 424

Query: 120 --GSGEPVNKLMNSWTKQKGYP 139
               G+ V ++M++WT Q GYP
Sbjct: 425 ASKLGKDVKEIMDTWTLQPGYP 446

This M1 peptidase family includes eukaryotic and bacterial members: aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease, consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1 also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP) or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 446
>gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|221257 pfam11838, DUF3358, Domain of unknown function (DUF3358) Back     alignment and domain information
>gnl|CDD|189009 cd09602, M1_APN_3, Peptidase M1 family containing Aminopeptidase N Back     alignment and domain information
>gnl|CDD|216501 pfam01433, Peptidase_M1, Peptidase family M1 Back     alignment and domain information
>gnl|CDD|233857 TIGR02412, pepN_strep_liv, aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>gnl|CDD|189002 cd09595, M1, Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase Back     alignment and domain information
>gnl|CDD|189010 cd09603, M1_APN_4, Peptidase M1 family Aminopeptidase N Back     alignment and domain information
>gnl|CDD|233858 TIGR02414, pepN_proteo, aminopeptidase N, Escherichia coli type Back     alignment and domain information
>gnl|CDD|189007 cd09600, M1_APN_1, Peptidase M1 family containing Aminopeptidase N Back     alignment and domain information
>gnl|CDD|189011 cd09604, M1_APN_5, Peptidase M1 family containing bacterial Aminopeptidase N Back     alignment and domain information
>gnl|CDD|237585 PRK14015, pepN, aminopeptidase N; Provisional Back     alignment and domain information
>gnl|CDD|222169 pfam13485, Peptidase_MA_2, Peptidase MA superfamily Back     alignment and domain information
>gnl|CDD|189006 cd09599, M1_LTA4H, Peptidase M1 family contains leukotriene A4 hydrolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 557
KOG1046882 consensus Puromycin-sensitive aminopeptidase and r 100.0
TIGR02412831 pepN_strep_liv aminopeptidase N, Streptomyces livi 100.0
PF11838324 ERAP1_C: ERAP1-like C-terminal domain; InterPro: I 100.0
COG0308859 PepN Aminopeptidase N [Amino acid transport and me 100.0
TIGR02414863 pepN_proteo aminopeptidase N, Escherichia coli typ 100.0
PRK14015875 pepN aminopeptidase N; Provisional 100.0
TIGR02411601 leuko_A4_hydro leukotriene A-4 hydrolase/aminopept 99.92
KOG1047613 consensus Bifunctional leukotriene A4 hydrolase/am 99.57
PF01433390 Peptidase_M1: Peptidase family M1 This is family M 99.27
PF13485128 Peptidase_MA_2: Peptidase MA superfamily 97.88
KOG1932 1180 consensus TATA binding protein associated factor [ 96.92
PF11940367 DUF3458: Domain of unknown function (DUF3458); Int 96.22
COG3975558 Predicted protease with the C-terminal PDZ domain 95.91
smart00638574 LPD_N Lipoprotein N-terminal Domain. 91.82
PF10460366 Peptidase_M30: Peptidase M30; InterPro: IPR019501 88.88
PF1364688 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I 84.65
>KOG1046 consensus Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=3.1e-91  Score=781.89  Aligned_cols=530  Identities=42%  Similarity=0.709  Sum_probs=488.8

Q ss_pred             CCCCChhhhhHhHHHHHHHHHHhhhCCchhhHHHHHHHhH-hhhhhcccCCCCCeeeecCCcccccccccccccchhhHH
Q 008697            1 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASV   79 (557)
Q Consensus         1 m~WW~dlWLnEgfAty~~~~~~~~~~p~~~~~~~f~~~~~-~al~~D~~~~s~pi~~~~~~~~~i~~~Fd~i~Y~Kga~v   79 (557)
                      |+||+|||||||||+||++++++..+|+|.++++|+.... .++..|++.++|||+.++.++.+|.++||.|+|.||++|
T Consensus       343 m~wW~dLWLnEGfAt~~~~~~v~~~~p~~~~~~~~~~~~l~~~l~~D~l~~shpi~~~v~~~~ei~e~fd~i~Y~KGasv  422 (882)
T KOG1046|consen  343 MKWWNDLWLNEGFATYVEYLAVDHLFPEWDIWEQFLLENLERVLSLDALASSHPISVPVESPSEIDEIFDEISYQKGASV  422 (882)
T ss_pred             HhhhhhhhhcccHHHHHHHHhhccCCcchhhHHHHHHHHHHHHhhhhcccccCCeeeecCCcchhhhhhhhhhhhHHHHH
Confidence            8999999999999999999999999999999999988766 899999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCHHHHHHHHHHHHHHhcCCCCChHHHHHHHHhccCCcHHHHHhhhccCCCcceEEEEEeCCEEEEEEeeccC
Q 008697           80 IRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLS  159 (557)
Q Consensus        80 l~Ml~~~iG~~~F~~gl~~yl~~~~~~na~~~dl~~~l~~~~~~~~~~~~~~W~~q~G~P~v~v~~~~~~~~i~Q~rf~~  159 (557)
                      ||||+.++|++.|++||+.||++|+|+|++++|||++|+...+.+|.++|++|+.|+|||+|+|.++++.++++|+||+.
T Consensus       423 lRML~~~lGe~~F~~gi~~yL~~~~y~na~~~DLw~~l~~~~~~~v~~~M~~Wt~Q~G~Pvv~V~~~~~~~~l~Q~rf~~  502 (882)
T KOG1046|consen  423 LRMLESLLGEEVFRKGLRSYLKKHQYSNAKTEDLWDALEEGSGLDVSELMDTWTKQMGYPVVTVERNGDSLTLTQERFLS  502 (882)
T ss_pred             HHHHHHHHCHHHHHHHHHHHHHHhccCCCCchhHHHHHhccCCCCHHHHHhhhhcCCCCceEEEEecCCEEEEehhhhcc
Confidence            99999999999999999999999999999999999999988999999999999999999999999998899999999988


Q ss_pred             CC--CCCCceEEEEEEEEecCCCceeeEEecCCccEEEcccccccccCCCCCCCCceEecCCceeeEEEEcCHHHHHHHH
Q 008697          160 SG--SPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLG  237 (557)
Q Consensus       160 ~~--~~~~~~W~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~~~~~l~  237 (557)
                      .+  ...+++|+||+++.+.........++..++..+.++.         ++  .||++|.++.|||||+||+++|..|+
T Consensus       503 ~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~--~wi~~N~~~~g~yRV~Yd~~~w~~l~  571 (882)
T KOG1046|consen  503 DPDPSEDNYLWWIPLTYTTSGSGSVPKFWLSSKSTTIKLPE---------SD--QWIKVNLEQTGYYRVNYDDENWALLI  571 (882)
T ss_pred             CCCccccCcccceeEEEEcCCCCccceeeecCCCcceecCC---------CC--eEEEEeCCcceEEEEEeCHHHHHHHH
Confidence            65  3456899999999877544335678888887777743         22  69999999999999999999999999


Q ss_pred             HHHhc-CCCCHHhhHHHHHHHHHHHHcCCCChHHHHHHHHhcccCCChhhHHHHHHHHHHHHhhhcccChhHHHHHHHHH
Q 008697          238 YAIEM-KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFF  316 (557)
Q Consensus       238 ~~l~~-~~i~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~vw~~~~~~l~~l~~~~~~~~~~~~~~~~~~~  316 (557)
                      .+|.. ..+++.+|++||+|+|+|+++|+++++.+|+++.|+.+|++|.||..+...+..+.. +  ...+.+..++.|+
T Consensus       572 ~~l~~~~~~~~~~Ra~li~D~~~la~~~~~~~~~~l~l~~~l~~e~~~~p~~~~~~~l~~~~~-~--~~~~~~~~~~~~~  648 (882)
T KOG1046|consen  572 EQLKNHESLSVIDRAQLINDAFALARAGRLPYSIALNLISYLKNETDYVPWSAAIRSLYKLHS-L--EDTEIYSKFKEFV  648 (882)
T ss_pred             HHHhhcCccCHhHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcccccchHHHHHHHHHHHhh-c--ccchHHHHHHHHH
Confidence            99977 689999999999999999999999999999999999999999999999887777776 2  3367889999999


Q ss_pred             HHHhHHHHHHhCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHhcCC
Q 008697          317 ISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSA  396 (557)
Q Consensus       317 ~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vyc~~~~~~~~  396 (557)
                      .+++.|.++++||.....++ ....+|..++..||..|+++|.+.|..+|..|+..  ++.+|+++|.+|||.++++|  
T Consensus       649 ~~l~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~~~a~~~f~~~~~~--~~~ip~~lr~~vy~~~~~~g--  723 (882)
T KOG1046|consen  649 KKLILPIFEKLGWSDGADSS-LDNMLRVSVLSFACRFGHEECLKKAVELFRQWLAG--TNPIPPDLREVVYCTAVQFG--  723 (882)
T ss_pred             HHHHHHHHHHhcCCccccch-hHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhc--CCCCChhhhhhhhhHHHHhc--
Confidence            99999999999998755443 77889999999999999999999999999999996  68899999999999999998  


Q ss_pred             CCHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHhhc-cccccccchhhhh---cCcccHHHHHHHHHHh
Q 008697          397 SDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLS-SEVRSQDAVYGLA---VSIEGRETAWKWLKDN  472 (557)
Q Consensus       397 ~~~~~~~~l~~~y~~s~~~~ek~~ll~aLac~~d~~ll~~~L~~~l~-~~i~~qd~~~~~~---~~~~~~~~~w~fl~~N  472 (557)
                       +++.|++++++|+++....||..++.||+|+++++.++++|++.++ ..++.||...++.   .++.|..++|+|+.+|
T Consensus       724 -~~~~w~~~~~~y~~~~~~~e~~~~l~al~~~~~~~~l~~~l~~~~~~~~v~~qd~~~~~~~~~~~~~g~~~a~~~~~~n  802 (882)
T KOG1046|consen  724 -TEEDWEQLLELYKKETTAAEKRKLLNALSCSKDPWLLQRLLDLAFDAENVRDQDVLTLLQGISGNPRGVELAWKFLQDN  802 (882)
T ss_pred             -CHhHHHHHHHHHhccccHHHHHHHHHHhccCccHHHHHHHHHHhcccccccchhHHHHHHHHhcCcccHHHHHHHHHHH
Confidence             9999999999999999999999999999999999999999998888 3499999998877   6788999999999999


Q ss_pred             HHHHHHHhCCCcchhhHHHhhccCCCCHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHhcChhhHHHHHHHh
Q 008697          473 WDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKEL  552 (557)
Q Consensus       473 ~~~i~~~~~~~~~l~~iv~~~~~~~~t~~~~~~~~~F~~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~~~~~~~~~~~  552 (557)
                      |+.+.+++++++.+..++..+++.+.+..+++++++||...+..+..+++++++|.++.|+.|++++.+.  +.+|+.+.
T Consensus       803 ~~~l~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~le~~~~ni~W~~~~~~~--l~~~l~~~  880 (882)
T KOG1046|consen  803 WKELLNRYGNNFELSRLISFITEPFATEEKLDEVEKFFADIPKTGAERALQQALETVKANIQWVERNEEN--LTQWLLEA  880 (882)
T ss_pred             HHHHHHhcCCcHHHHHHHHHHHhccCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhhhhHHHhhHHH--HHHHHHHh
Confidence            9999999994488999999999999999999999999999876666899999999999999999955555  99999864

>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] Back     alignment and domain information
>COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type Back     alignment and domain information
>PRK14015 pepN aminopeptidase N; Provisional Back     alignment and domain information
>TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase Back     alignment and domain information
>KOG1047 consensus Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Defense mechanisms; Amino acid transport and metabolism] Back     alignment and domain information
>PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification Back     alignment and domain information
>PF13485 Peptidase_MA_2: Peptidase MA superfamily Back     alignment and domain information
>KOG1932 consensus TATA binding protein associated factor [Transcription] Back     alignment and domain information
>PF11940 DUF3458: Domain of unknown function (DUF3458); InterPro: IPR024601 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only] Back     alignment and domain information
>smart00638 LPD_N Lipoprotein N-terminal Domain Back     alignment and domain information
>PF10460 Peptidase_M30: Peptidase M30; InterPro: IPR019501 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query557
3se6_A967 Crystal Structure Of The Human Endoplasmic Reticulu 3e-52
1z1w_A780 Crystal Structures Of The Tricorn Interacting Facor 1e-51
3q7j_A780 Engineered Thermoplasma Acidophilum F3 Factor Mimic 1e-51
4e36_A967 Crystal Structure Of The Human Endoplasmic Reticulu 1e-51
2yd0_A897 Crystal Structure Of The Soluble Domain Of Human En 5e-48
3qnf_A954 Crystal Structure Of The Open State Of Human Endopl 6e-48
4hol_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 8e-48
4fke_A909 Crystal Structure Of Porcine Aminopeptidase-N Lengt 9e-48
4h5h_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 1e-47
4f5c_A959 Crystal Structure Of The Spike Receptor Binding Dom 1e-47
3mdj_A921 Er Aminopeptidase, Erap1, Bound To The Zinc Aminope 5e-47
4fyq_A903 Human Aminopeptidase N (Cd13) Length = 903 1e-43
3rjo_A419 Crystal Structure Of Erap1 Peptide Binding Domain L 5e-16
3puu_A891 Crystal Structure Of Glu121gln Mutant Of E. Coli Am 1e-07
2hpo_A891 Structure Of Aminopeptidase N From E. Coli Suggests 1e-07
2dq6_A870 Crystal Structure Of Aminopeptidase N From Escheric 1e-07
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 Back     alignment and structure 
Iteration: 1

 Score =  202 bits (515), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 153/584 (26%), Positives = 262/584 (44%), Gaps = 67/584 (11%)
Query: 1   MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNH 60
           MEWW  +WLNEGFA ++  +A ++ +PE +    FL+ C E +  D L  S PI      
Sbjct: 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAET 442
Query: 61  TGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEE- 119
             +I E+FD +SY KGA ++ ML+++LG E FQ+ +  Y+KK++  NAK +DLW++L   
Sbjct: 443 PTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNS 502
Query: 120 --------------------------GSGEPVNKLMNSWTKQKGYPVIXXXXXXXXXXXX 153
                                     G    V ++M +WT QKG P++            
Sbjct: 503 CLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGIPLLVVKQDGCSLRLQ 562
Query: 154 XXXXXXXGSPGDGQ---------WIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI 204
                      D +         W +P+T    S +V    +L +K+D+ D+ E      
Sbjct: 563 QERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616
Query: 205 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQ--LSETDRFGILDDHFALCM 262
                   W+K NV+  G+Y V Y+     +L   +      L   DR G++ D F L  
Sbjct: 617 -----KTSWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVG 671
Query: 263 ARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDY---LKQFFISL 319
           A + TL   L +      ET    L  L  +SY         R  + D    LK++ +  
Sbjct: 672 AGRLTLDKALDMTYYLQHETSSPAL--LEGLSYLESFYHMMDRRNISDISENLKRYLLQY 729
Query: 320 FQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLP 379
           F+   ++  W  K   S  D +LR  +      L H   + +A++ F  ++       +P
Sbjct: 730 FKPVIDRQSWSDK--GSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIP 787
Query: 380 PDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLN 439
            D+ K  Y      V A   +G+  LL  Y  +  S E+ +IL +L++      +L+++ 
Sbjct: 788 TDVLKIVY-----SVGAQTTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIE 842
Query: 440 FLLSSEV-RSQD---AVYGLAVSIEGRETAWKWLKDNWDHISKTWGSG-FLITRFISSIV 494
             +  +V ++Q+    ++ +A   +G++ AW ++++NW H+ K +  G + I   IS   
Sbjct: 843 LGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTT 902
Query: 495 SPFASYEKVREVEEFFSS-RCKPYIARTLRQSIERVQINAKWVE 537
           + F+S +K++EV+ FF S   +       +  +E +  N KW+E
Sbjct: 903 AHFSSKDKLQEVKLFFESLEAQGSHLDIFQTVLETITKNIKWLE 946
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations Length = 780 Back     alignment and structure
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human Aminopeptidase N (Apn) As A Target For Anticancer Drug Development Length = 780 Back     alignment and structure
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 Back     alignment and structure
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 Back     alignment and structure
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 Back     alignment and structure
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 Back     alignment and structure
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 Back     alignment and structure
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 Back     alignment and structure
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 Back     alignment and structure
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 Back     alignment and structure
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 Back     alignment and structure
>pdb|3RJO|A Chain A, Crystal Structure Of Erap1 Peptide Binding Domain Length = 419 Back     alignment and structure
>pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli Aminopeptidase N Length = 891 Back     alignment and structure
>pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A Compartmentalized, Gated Active Site Length = 891 Back     alignment and structure
>pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia Coli Length = 870 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query557
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 0.0
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 0.0
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 0.0
3rjo_A419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 1e-111
3b7s_A616 Leukotriene A-4 hydrolase; transition state, analo 3e-59
3cia_A605 Cold-active aminopeptidase; psychrohilic, hydrolas 5e-58
2xq0_A632 LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B 4e-57
2gtq_A867 Aminopeptidase N; alanine aminopeptidase, M1 famil 6e-52
3ebh_A889 PFA-M1, M1 family aminopeptidase; hydrolase, metal 3e-50
3b34_A891 Aminopeptidase N; protease, hydrolase, thermolysin 1e-47
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 Back     alignment and structure
 Score =  551 bits (1422), Expect = 0.0
 Identities = 152/546 (27%), Positives = 251/546 (45%), Gaps = 50/546 (9%)

Query: 1   MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFL-DECTEGLRLDGLAESHPIEVEVN 59
           M+WW  LWLNE FAT++SY   D+LFPEW  W  F     +  LR D L  +HPIEV+V 
Sbjct: 278 MKWWNDLWLNESFATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVR 337

Query: 60  HTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEE 119
              EI +IFD ISY KGAS++RM+++Y G E F++ ++ Y+  +   NA+  DLW A+E+
Sbjct: 338 DPDEISQIFDEISYGKGASILRMIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIED 397

Query: 120 GSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSY 179
            SG+PV ++M  W K  GYPVI +K    K+ + Q++FL +G   +G+W VP+       
Sbjct: 398 VSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNGEE-EGRWPVPVN------ 450

Query: 180 DVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYA 239
                     K D  + + LL    S E D  G IK+N +  GFYRV YD    + +   
Sbjct: 451 --------IKKKDGVE-RILLEDEASIEAD--GLIKINADSAGFYRVLYDDATFSDVMGH 499

Query: 240 IEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGR 299
              + LS  DR G++DD FA  ++      +    + ++ ++ ++ V++ ++     +  
Sbjct: 500 Y--RDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRM 557

Query: 300 IAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETL 359
           +         D  + F  S  Q          K  E+   AL R    + L ++  +   
Sbjct: 558 LTHAFD----DDARAFCRSRMQF------LTGKQDENLKIALGR---VSRLYVMVDESYA 604

Query: 360 NEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKT 419
            E SK F  F +        P++R +   A             + LL  +R  D  +++ 
Sbjct: 605 EEMSKLFKDFDS------AEPEMRSSIATAYALVT-----GDLKGLLEKFRSVDRDEDRV 653

Query: 420 RILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVY---GLAVSIEGRETAWKWLKDNWDHI 476
           RI+S+         +  V   +  +E++ QD +        ++ GRE  +  L      +
Sbjct: 654 RIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLV 713

Query: 477 SKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWV 536
            + +      +R +  ++          + E+   +     I+  L + IE + +N K V
Sbjct: 714 IRYFTGNRTASRTVEMMIPVIGLDHP--DAEDIVRNIGSKNISMGLAKGIEMLAVNRKLV 771

Query: 537 ESIRNE 542
           E IR  
Sbjct: 772 ERIRQT 777
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 Back     alignment and structure
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 Back     alignment and structure
>3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616 Back     alignment and structure
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605 Back     alignment and structure
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632 Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867 Back     alignment and structure
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889 Back     alignment and structure
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Length = 891 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query557
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 100.0
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 100.0
4fke_A909 Aminopeptidase N; zinc aminopeptidase, hydrolase; 100.0
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 100.0
3rjo_A419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 100.0
2gtq_A867 Aminopeptidase N; alanine aminopeptidase, M1 famil 100.0
3b34_A891 Aminopeptidase N; protease, hydrolase, thermolysin 100.0
3ebh_A889 PFA-M1, M1 family aminopeptidase; hydrolase, metal 100.0
3cia_A605 Cold-active aminopeptidase; psychrohilic, hydrolas 99.97
2xq0_A632 LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B 99.95
3u9w_A608 Leukotriene A-4 hydrolase; hydrolase-hydrolase inh 99.95
4fgm_A597 Aminopeptidase N family protein; structural genomi 99.2
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A* Back     alignment and structure
Probab=100.00  E-value=2e-102  Score=884.29  Aligned_cols=533  Identities=28%  Similarity=0.528  Sum_probs=485.6

Q ss_pred             CCCCChhhhhHhHHHHHHHHHHhhhCCchhhHHHHHHHhHhhhhhcccCCCCCeeeecCCcccccccccccccchhhHHH
Q 008697            1 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI   80 (557)
Q Consensus         1 m~WW~dlWLnEgfAty~~~~~~~~~~p~~~~~~~f~~~~~~al~~D~~~~s~pi~~~~~~~~~i~~~Fd~i~Y~Kga~vl   80 (557)
                      |+||+|+|||||||+|+++++++..+|+|.+++.|+.+...+|..|+..++|||..++.++.+|..+||.++|.||++||
T Consensus       383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL  462 (967)
T 3se6_A          383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL  462 (967)
T ss_dssp             ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred             cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence            68999999999999999999999999999988777655568999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCHHHHHHHHHHHHHHhcCCCCChHHHHHHHHhc---------------------------cCCcHHHHHhhhc
Q 008697           81 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT  133 (557)
Q Consensus        81 ~Ml~~~iG~~~F~~gl~~yl~~~~~~na~~~dl~~~l~~~---------------------------~~~~~~~~~~~W~  133 (557)
                      |||+.+||++.|++||+.|+++|+|+|++++|||++|+++                           +|.++.+||++|+
T Consensus       463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~  542 (967)
T 3se6_A          463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT  542 (967)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence            9999999999999999999999999999999999999985                           6789999999999


Q ss_pred             cCCCcceEEEEEeCCEEEEEEeeccCCCCC---------CCceEEEEEEEEecCCCceeeEEecCCccEEEccccccccc
Q 008697          134 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI  204 (557)
Q Consensus       134 ~q~G~P~v~v~~~~~~~~i~Q~rf~~~~~~---------~~~~W~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  204 (557)
                      .|+|||+|+|+++++.++|+|+||+.++..         .+..|+|||+|.++.......+|++.++..+.++.      
T Consensus       543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------  616 (967)
T 3se6_A          543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------  616 (967)
T ss_dssp             HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred             cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence            999999999999889999999999875421         34689999999877654455678877766666532      


Q ss_pred             CCCCCCCCceEecCCceeeEEEEcCHHHHHHHHHHHhcC--CCCHHhhHHHHHHHHHHHHcCCCChHHHHHHHHhcccCC
Q 008697          205 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEET  282 (557)
Q Consensus       205 ~~~~~~~~wi~~N~~~~gyyRV~Yd~~~~~~l~~~l~~~--~i~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~  282 (557)
                         ++  +||++|.++.|||||+||+++|..|+++|..+  .||+.+|+|||+|+|+||++|.++|+.+|+++.||++|+
T Consensus       617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~  691 (967)
T 3se6_A          617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET  691 (967)
T ss_dssp             ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred             ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence               22  89999999999999999999999999999753  699999999999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHhhhcc-cChhHHHHHHHHHHHHhHHHHHHhCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 008697          283 EYTVLSNLITISYKIGRIAAD-ARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNE  361 (557)
Q Consensus       283 ~~~vw~~~~~~l~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~il~~ac~~g~~~c~~~  361 (557)
                      +|.||.+++..+..+.+++.. ..++.++.|++|+++++.|+++++||+  +++++.++++|..++.+||.+|+++|+++
T Consensus       692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~--~~~~~~~~~lR~~il~~ac~~g~~~c~~~  769 (967)
T 3se6_A          692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQK  769 (967)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSS--CCSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence            999999999999888887532 225678899999999999999999997  46789999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCCCChhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHh
Q 008697          362 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL  441 (557)
Q Consensus       362 a~~~f~~~~~~~~~~~i~~dlr~~vyc~~~~~~~~~~~~~~~~l~~~y~~s~~~~ek~~ll~aLac~~d~~ll~~~L~~~  441 (557)
                      |.++|++|+.++....|||++|.+|||+|++     ++++|++++++|++++++.||..++.||||++|+++++++|+++
T Consensus       770 A~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~~-----~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~  844 (967)
T 3se6_A          770 AAELFSQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELG  844 (967)
T ss_dssp             HHHHHHHHHHTTTCSCCCHHHHHHHHHHHTT-----SHHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCCcccCChhhhhHhHhhhhc-----cHHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence            9999999998754447999999999999987     58999999999999999999999999999999999999999999


Q ss_pred             hccc-cccccchhhhh---cCcccHHHHHHHHHHhHHHHHHHhCCC-cchhhHHHhhccCCCCHHHHHHHHHHHhcCCcc
Q 008697          442 LSSE-VRSQDAVYGLA---VSIEGRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKP  516 (557)
Q Consensus       442 l~~~-i~~qd~~~~~~---~~~~~~~~~w~fl~~N~~~i~~~~~~~-~~l~~iv~~~~~~~~t~~~~~~~~~F~~~~~~~  516 (557)
                      ++++ ||+||+..++.   .|+.|++++|+|+++||+.|.++++.+ +.+.++|..+++.++|+++++++++||++++..
T Consensus       845 l~~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~nw~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~l~~~~~f~~~~~~~  924 (967)
T 3se6_A          845 MEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ  924 (967)
T ss_dssp             HHCSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHTTTTTCCSHHHHHHHHHHHHHSCSS
T ss_pred             hCcCcCcHhHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCcc
Confidence            9876 89999998887   789999999999999999999999865 689999999999999999999999999988654


Q ss_pred             h-HHHHHHHHHHHHHHHHHHHHHhcChhhHHHHHHHhh
Q 008697          517 Y-IARTLRQSIERVQINAKWVESIRNEGHLAEAVKELA  553 (557)
Q Consensus       517 ~-~~~~~~~~le~i~~ni~W~~~~~~~~~~~~~~~~~~  553 (557)
                      + ..++++|++|+|+.|++|++++.++  |.+||+.+-
T Consensus       925 ~~~~~~~~q~le~i~~ni~W~~~~~~~--i~~wl~~~~  960 (967)
T 3se6_A          925 GSHLDIFQTVLETITKNIKWLEKNLPT--LRTWLMVNT  960 (967)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcc
Confidence            4 4689999999999999999988777  999999874
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Back     alignment and structure
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Back     alignment and structure
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Back     alignment and structure
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Back     alignment and structure
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Back     alignment and structure
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Back     alignment and structure
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ... Back     alignment and structure
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 557
d3b7sa3252 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase cat 2e-23
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 252 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (241), Expect = 2e-23
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 8/152 (5%)

Query: 1   MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTE-GLRLDGLAESHPIEVEVN 59
            + W H WLNEG   ++       LF E       L    E    +    E+HP    V 
Sbjct: 100 NKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVV 159

Query: 60  HTGEID--EIFDAISYRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAA 116
              +ID    + ++ Y KG +++  L+  LG  E F   L +Y++K++  +  T+D    
Sbjct: 160 DLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDF 219

Query: 117 LEEGSGEPVNKL----MNSWTKQKGYPVISVK 144
           L     + V+ L     N+W    G P I   
Sbjct: 220 LYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPN 251

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query557
d3b7sa3252 Leukotriene A4 hydrolase catalytic domain {Human ( 99.94
d1lsha1336 Lipovitellin-phosvitin complex, superhelical domai 88.93
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2e-28  Score=236.76  Aligned_cols=144  Identities=26%  Similarity=0.416  Sum_probs=125.0

Q ss_pred             CCCCChhhhhHhHHHHHHHHHHhhhCCchhhHHHHHHHh-HhhhhhcccCCCCCeeeecCCcc--cccccccccccchhh
Q 008697            1 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDEC-TEGLRLDGLAESHPIEVEVNHTG--EIDEIFDAISYRKGA   77 (557)
Q Consensus         1 m~WW~dlWLnEgfAty~~~~~~~~~~p~~~~~~~f~~~~-~~al~~D~~~~s~pi~~~~~~~~--~i~~~Fd~i~Y~Kga   77 (557)
                      |+||+|+|||||||+|+++.+++.++|+......+.... ...+..|+...++|++.++..+.  ++...|+.++|.||+
T Consensus       100 ~~~w~~~WL~EG~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~Y~Kga  179 (252)
T d3b7sa3         100 NKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKGF  179 (252)
T ss_dssp             ESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHHHHHHH
T ss_pred             eccccchHhhccHHHHHHHHhhccccchhhhhhhhhhhhhhHHHHHhhhhccCCcceeeccccccchhhcccceeecchh
Confidence            589999999999999999999999998765544444432 25677788888899876654433  446689999999999


Q ss_pred             HHHHHHHHhhC-HHHHHHHHHHHHHHhcCCCCChHHHHHHHHhccCCcHHHH----HhhhccCCCcceEEEE
Q 008697           78 SVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNSWTKQKGYPVISVK  144 (557)
Q Consensus        78 ~vl~Ml~~~iG-~~~F~~gl~~yl~~~~~~na~~~dl~~~l~~~~~~~~~~~----~~~W~~q~G~P~v~v~  144 (557)
                      +||+||+..|| ++.|+++||.|+++|+|+++++.||++++++++|.++..+    |++|++|+|||+|+|+
T Consensus       180 ~vl~mL~~~iG~~~~f~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~~~~~~~~~f~~W~~~~G~P~l~v~  251 (252)
T d3b7sa3         180 ALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPN  251 (252)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHTTSCHHHHHHCCSSCSSCCC
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhccccchhhHhHHHHHhcCCCCCeeecc
Confidence            99999999999 7899999999999999999999999999999999998888    9999999999999985
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} Back     information, alignment and structure