Citrus Sinensis ID: 008737

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-----
Protein Sequence
MKMAFLTGKASFFVLVLVLVSLRSISALSQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPEMLEPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCISRSQKNSVNSSNA
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHEEEEEccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHcccEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHcccHHHHHHHHHHHHHHHHHHHcccccccccccHHEEEcccccccccccccHHHccccccccccEEEEccccccccccccccEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEccccHHHHcccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
Coil and Loop (DISEMBL)
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
Flexible Loop (DISEMBL)
mkmafltgkaSFFVLVLVLVSLRSISALSQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPEMLEPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAAntladktsensakIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELstsgssafgrcNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPikcisrsqknsvnssna
Low Complexity Region (SEG)
MKMAFLTGKasffvlvlvlvslrsisalsQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPEMLEPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAAlmlllsiiglflsilRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCISRSQKNSVNSSNA
Disordered region (IsUnstruct)
****FLTGKASFFVLVLVLVSLRSISALSQD**GRDALKLILGEHNLGPLKNGI*************PLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRD*****************KIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCI*************
Disordered Region (DISOPRED)
********KASFFVLVLVLVSLRSISA*******************************************LASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINI***ESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTL**KTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRP*****************************
Disordered Region (DISEMBL)
MKMAFLTGKASFFVLVLVLVSLRSISALSQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPEMLEPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCISR***********
Disordered Region (DISPRO)
*K*AFLTGKASFFVLVLVLVSLRSISALSQDGSGRDALKLILGEHNLGPLKNGINEDAV*P****LEPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVN*********************
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKMAFLTGKASFFVLVLVLVSLRSISALSQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPEMLEPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDxxxxxxxxxxxxxxxxxxxxxNSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCISRSQKNSVNSSNA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	555
224108357	564	predicted protein [Populus trichocarpa]	0.985	0.969	0.677	0.0
356524559	559	PREDICTED: uncharacterized protein LOC10	0.967	0.960	0.640	0.0
145337400	557	uncharacterized protein [Arabidopsis tha	0.935	0.931	0.644	0.0
110740574	557	hypothetical protein [Arabidopsis thalia	0.935	0.931	0.643	0.0
356575630	543	PREDICTED: uncharacterized protein LOC10	0.945	0.966	0.663	0.0
356536222	550	PREDICTED: uncharacterized protein LOC10	0.960	0.969	0.653	0.0
356566456	530	PREDICTED: uncharacterized protein LOC10	0.920	0.964	0.662	0.0
359472887	536	PREDICTED: uncharacterized protein LOC10	0.918	0.951	0.686	0.0
297737727	701	unnamed protein product [Vitis vinifera]	0.918	0.727	0.686	0.0
297838929	557	hypothetical protein ARALYDRAFT_476243 [	0.918	0.915	0.640	0.0

>gi|224108357|ref|XP_002314819.1| predicted protein [Populus trichocarpa] gi|222863859|gb|EEF00990.1| predicted protein [Populus trichocarpa]

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/559 (67%), Positives = 450/559 (80%), Gaps = 12/559 (2%)

Query: 1   MKMAFLTGKASFFVLVLVLVSLRSISALSQDGSGRDALKLILGEHNLGPLKNGINEDAV- 59
           MKM FL  +  F +LV+ L    S+ AL  +G  +D LK ILG+ NLGP +NGI+E A  
Sbjct: 1   MKM-FLVPRFGFLLLVVSLSC--SVLALPGNGPAKDPLKYILGQDNLGPFRNGISETAAR 57

Query: 60  APGPEML---EPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVI 116
           APGP        L+LA+ RT RPDIL+ F+ Y+GGW+IT+ HYWASVGFTGA+ FILA +
Sbjct: 58  APGPSDYGSNNTLVLAAKRTDRPDILHGFKHYRGGWNITDPHYWASVGFTGAAGFILAFL 117

Query: 117 WFISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHG 176
           WF  FG  LVAHHC  WRINIK K S+ SQRI LI+LI+FTCAAAIGCILL VGQD+FHG
Sbjct: 118 WFFLFGFALVAHHCFKWRINIKDKGSSRSQRISLIMLILFTCAAAIGCILLCVGQDDFHG 177

Query: 177 EAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAAN 236
           EAM+TLKYVVNQSDYTV+TL+NVTEYLSLAKTIN+AQ+ LPS VMDDIDKLN DL+ AA+
Sbjct: 178 EAMNTLKYVVNQSDYTVQTLKNVTEYLSLAKTINIAQLVLPSNVMDDIDKLNVDLNAAAD 237

Query: 237 TLADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLL 296
           TL +KTSEN+ KI KVFNAVRSALITVAA+ML+L+++G  LSIL H+HAIHIF++SGWLL
Sbjct: 238 TLTEKTSENAGKIVKVFNAVRSALITVAAVMLILALLGFLLSILGHQHAIHIFVVSGWLL 297

Query: 297 VAITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEV 356
           VA+TFILCGVF++LNNAISDTC+AM+EWV++PHA +ALS+ILPCVDQRTTN +L+QSKEV
Sbjct: 298 VAVTFILCGVFILLNNAISDTCLAMEEWVENPHAASALSSILPCVDQRTTNNTLVQSKEV 357

Query: 357 ITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIAN 416
           ITDIVNVVN ++Y  ANANPSQ    YYNQ+GP MPPLCYP+DS  QDRQC   EVS+AN
Sbjct: 358 ITDIVNVVNTYIYTFANANPSQTEFNYYNQSGPSMPPLCYPFDSLYQDRQCEPREVSMAN 417

Query: 417 ASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDC 476
           AS VWQNYTC +S+S     G C +VGRV P  Y++LV+AV E YAL+ YTP LLSLQDC
Sbjct: 418 ASVVWQNYTCMVSSS-----GLCTTVGRVIPDIYRQLVAAVNESYALEYYTPVLLSLQDC 472

Query: 477 NFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLP 536
            FVRDTF  ITS++CPPLEHYLKIVNAGLG+IS GVLLCL+LWILYAN P  EEVF  + 
Sbjct: 473 KFVRDTFLEITSSHCPPLEHYLKIVNAGLGLISVGVLLCLVLWILYANCPLSEEVFAKIS 532

Query: 537 LPIKCISRSQKNSVNSSNA 555
            PIKC S      + S+++
Sbjct: 533 SPIKCSSGCTGVKIGSTSS 551

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524559|ref|XP_003530896.1| PREDICTED: uncharacterized protein LOC100796983 [Glycine max]

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/543 (64%), Positives = 424/543 (78%), Gaps = 6/543 (1%)

Query: 12  FFVLVLVLVSLRSISALSQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPEMLEPLLL 71
            F+  LVL S+  +SALS  GS +  +K ILGE NLGP KN + + A A  P     L+L
Sbjct: 15  LFIFPLVL-SVHLLSALSPTGSSKHPIKFILGEDNLGPWKNEVTQVAQAARPRTKGTLVL 73

Query: 72  ASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCC 131
           A+NRT RPDIL  FRRY GGWDI N+HYWASVGFTG + F LAV+WFISFGL LV H CC
Sbjct: 74  AANRTNRPDILQGFRRYHGGWDIANRHYWASVGFTGVAGFTLAVLWFISFGLALVIHLCC 133

Query: 132 GWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDY 191
           GW INIK K S   QRI L+LL++FTC    GCI+LS GQD+FHGEA+ TL YVVNQSDY
Sbjct: 134 GWGINIKDKGSNRLQRIWLVLLLLFTCVVTTGCIVLSFGQDKFHGEAVDTLHYVVNQSDY 193

Query: 192 TVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRK 251
           TV+TLRNVTEYL+L KTI VA++FLPS +MDDIDKLN DL +AA+TL+ +T+ENS KIRK
Sbjct: 194 TVQTLRNVTEYLALTKTIVVAEMFLPSNIMDDIDKLNADLDSAADTLSKQTNENSFKIRK 253

Query: 252 VFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILN 311
           VFNA R ALI +AA+M+LL++IGL LSIL ++HAI IF+++GWLLVA TFI CGVF ILN
Sbjct: 254 VFNAARLALIMMAAVMILLAVIGLILSILGYQHAILIFVITGWLLVATTFIFCGVFTILN 313

Query: 312 NAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNI 371
           NAI DTCMAM EWV++PHAE+ALS+ILPCVDQRTTNK+L QSK+V+T+IV++VN+F+Y+ 
Sbjct: 314 NAICDTCMAMGEWVENPHAESALSHILPCVDQRTTNKTLFQSKQVVTNIVSIVNRFIYDT 373

Query: 372 ANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTS 431
           A+A+PSQ  + YYNQ+GP MPPLCYP+DSQ ++ QC   EVS+ANAS VW+ Y C+    
Sbjct: 374 ADASPSQGSMNYYNQSGPAMPPLCYPFDSQFREHQCTPQEVSLANASLVWKRYECK---- 429

Query: 432 GSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYC 491
            +S +G C +VGRVTP  Y ELV  V E YAL+ YTP LLSLQ+CNFVR  F+ ITS YC
Sbjct: 430 -TSEYGVCTTVGRVTPEIYLELVQVVNESYALEHYTPLLLSLQNCNFVRHAFKEITSRYC 488

Query: 492 PPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCISRSQKNSVN 551
            PL HYLK++N GLG+IS GVLLCL+LWILYANRPQREE FV L +  K  ++  KN   
Sbjct: 489 LPLNHYLKVINVGLGLISIGVLLCLVLWILYANRPQREEAFVRLYIAKKLKNKFSKNPNR 548

Query: 552 SSN 554
           +S+
Sbjct: 549 NSS 551

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145337400|ref|NP_177267.2| uncharacterized protein [Arabidopsis thaliana] gi|332197041|gb|AEE35162.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/538 (64%), Positives = 425/538 (78%), Gaps = 19/538 (3%)

Query: 11  SFFVL-VLVLVSLRSIS----ALSQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPE- 64
           SFF+L V+V VSL   S      S   + +D L+LILG  N G  K GI   ++APGPE 
Sbjct: 2   SFFILSVVVFVSLAFFSLPHSVDSSVSASQDPLRLILGSPNFGTWKGGI---SLAPGPES 58

Query: 65  ---MLEPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISF 121
              + + LLLA++RTKRPDIL  F+ Y GGW+ITN HYWASVGFTGA  FILAVIW +SF
Sbjct: 59  DDVVSDYLLLAAHRTKRPDILRAFKPYHGGWNITNNHYWASVGFTGAPGFILAVIWLLSF 118

Query: 122 GLVLVAHHCCGWRINIKGKESA-SSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMH 180
           G +LV +HC  WRI  K K S+  ++RIC ILLIVFTC AA+GCILLSVGQD+FH EAMH
Sbjct: 119 GSLLVVYHCFKWRICDKAKGSSFDTRRICFILLIVFTCVAAVGCILLSVGQDKFHTEAMH 178

Query: 181 TLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLAD 240
           TLKYVVNQSDYTV+ L+NVT+YLSLAKTINV Q+ +PS VM +IDKLN +L+TAA TL +
Sbjct: 179 TLKYVVNQSDYTVEILQNVTQYLSLAKTINVTQIVIPSDVMGEIDKLNVNLNTAAVTLGE 238

Query: 241 KTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAIT 300
            T++N+AKI++VF AVRSALITVA +ML+LS +GL LS+LRH+H +HIF++SGW+LVA+T
Sbjct: 239 TTTDNAAKIKRVFYAVRSALITVATVMLILSFVGLLLSVLRHQHVVHIFVVSGWILVAVT 298

Query: 301 FILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDI 360
           F+LCGVF+ILNNAISDTC+AM EWVD+PHAETALS+ILPCVDQ+TTN++L QSK VI  I
Sbjct: 299 FVLCGVFLILNNAISDTCVAMKEWVDNPHAETALSSILPCVDQQTTNQTLSQSKVVINSI 358

Query: 361 VNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKV 420
           V VVN FVY +AN NP+     YYNQ+GP MPPLC P+D+ ++DRQC  +E+SI NAS V
Sbjct: 359 VTVVNTFVYAVANTNPAPGQDRYYNQSGPPMPPLCIPFDANMEDRQCSPWELSIENASSV 418

Query: 421 WQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVR 480
           W+NY CE++ SG      C +VGRVTP  + +LV+AV E YAL+ YTP LLS +DCNFVR
Sbjct: 419 WENYKCEVTPSGI-----CTTVGRVTPDTFGQLVAAVNESYALEHYTPPLLSFRDCNFVR 473

Query: 481 DTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLP 538
           +TF +ITS+YCPPL   L+IVNAGLG+IS GVLLCL+LWI YANRPQREEVF + P P
Sbjct: 474 ETFMSITSDYCPPLVRNLRIVNAGLGLISVGVLLCLVLWIFYANRPQREEVFAD-PHP 530

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110740574|dbj|BAE98392.1| hypothetical protein [Arabidopsis thaliana]

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/538 (64%), Positives = 425/538 (78%), Gaps = 19/538 (3%)

Query: 11  SFFVL-VLVLVSLRSIS----ALSQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPE- 64
           SFF+L V+V VSL   S      S   + +D L+LILG  N G  K GI   ++APGPE 
Sbjct: 2   SFFILSVVVFVSLAFFSLPHSVDSSVSASQDPLRLILGSPNFGTWKGGI---SLAPGPES 58

Query: 65  ---MLEPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISF 121
              + + LLLA++RTKRPDIL  F+ Y GGW+ITN HYWASVGFTGA  FILAVIW +SF
Sbjct: 59  DDVVSDYLLLAAHRTKRPDILRAFKPYHGGWNITNNHYWASVGFTGAPGFILAVIWLLSF 118

Query: 122 GLVLVAHHCCGWRINIKGKESA-SSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMH 180
           G +LV +HC  WRI  K K S+  ++RIC ILLIVFTC AA+GCILLSVGQD+FH EAMH
Sbjct: 119 GSLLVVYHCFKWRICDKAKGSSFDTRRICFILLIVFTCVAAVGCILLSVGQDKFHTEAMH 178

Query: 181 TLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLAD 240
           TLKYVVNQSDYTV+ L+NVT+YLSLAKTINV Q+ +PS VM +IDKLN +L+TAA TL +
Sbjct: 179 TLKYVVNQSDYTVEILQNVTQYLSLAKTINVTQIVIPSDVMGEIDKLNVNLNTAAVTLGE 238

Query: 241 KTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAIT 300
            T++N+AKI++VF AVRSALITVA +ML+LS +GL LS+LRH+H +HIF++SGW+LVA+T
Sbjct: 239 TTTDNAAKIKRVFYAVRSALITVATVMLILSFVGLLLSVLRHQHVVHIFVVSGWILVAVT 298

Query: 301 FILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDI 360
           F+LCGVF+ILNNAISDTC+AM EWVD+PHAETALS+ILPCVDQ+TTN++L QSK VI  I
Sbjct: 299 FVLCGVFLILNNAISDTCVAMKEWVDNPHAETALSSILPCVDQQTTNQTLSQSKVVINSI 358

Query: 361 VNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKV 420
           V VVN FVY +AN NP+     YYNQ+GP MPPLC P+D+ ++DRQC  +E+SI NAS V
Sbjct: 359 VTVVNTFVYAVANTNPAPGQDRYYNQSGPPMPPLCIPFDANMEDRQCSPWELSIENASSV 418

Query: 421 WQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVR 480
           W+NY CE++ SG      C +VGRVTP  + +LV+AV E YAL+ YTP LLS +DC+FVR
Sbjct: 419 WENYKCEVTPSGI-----CTTVGRVTPDTFGQLVAAVNESYALEHYTPPLLSFRDCSFVR 473

Query: 481 DTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLP 538
           +TF +ITS+YCPPL   L+IVNAGLG+IS GVLLCL+LWI YANRPQREEVF + P P
Sbjct: 474 ETFMSITSDYCPPLVRNLRIVNAGLGLISVGVLLCLVLWIFYANRPQREEVFAD-PHP 530

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575630|ref|XP_003555941.1| PREDICTED: uncharacterized protein LOC100794625 [Glycine max]

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/532 (66%), Positives = 422/532 (79%), Gaps = 7/532 (1%)

Query: 9   KASFFVLVLVLVSLRSISALSQDGSGRDALKLILGEH--NLGPLKNGINEDAVAPGPEML 66
           KA  F  V +L+ L S+SA S  GS R  +K I+GE   NLG  K+   + A APGP+  
Sbjct: 2   KAFSFSGVWILLFLSSVSAFSPTGSIRHPVKFIIGEEEENLGSWKSEFTQVAPAPGPKGD 61

Query: 67  EPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLV 126
           + L+LA+N+T RPDIL  FRRY+GGWDI ++HYWASVGFTGA+ FILAV+WFISFGL L+
Sbjct: 62  DVLILAANKTNRPDILRGFRRYRGGWDIADQHYWASVGFTGAAGFILAVLWFISFGLALM 121

Query: 127 AHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVV 186
            H C GW INIKGK S  SQRICLILLI FT AAA GCILLSVGQD+FHG+A+ TL Y V
Sbjct: 122 IHLCFGWGINIKGKGSNHSQRICLILLISFTFAAATGCILLSVGQDKFHGQALDTLHYFV 181

Query: 187 NQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENS 246
           NQSDYTV+TLRNVTEYLSLAKTINV ++ LPS VMD IDKLN DL+++A+TL++KT+ENS
Sbjct: 182 NQSDYTVQTLRNVTEYLSLAKTINVTRILLPSDVMDGIDKLNVDLNSSADTLSEKTNENS 241

Query: 247 AKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGV 306
            KIR+VFN VR AL  VAA+MLLL+++GL LS+L ++HAI IF+++GWLLVA TF+LCGV
Sbjct: 242 VKIRRVFNDVRLALYVVAAVMLLLALVGLVLSVLGYQHAILIFVITGWLLVATTFVLCGV 301

Query: 307 FVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQ 366
           F+ILNNAISDTC+AM EWV +PH E+ALSN+LPCVDQRTTNK+L QSK+VI +I NVVN 
Sbjct: 302 FIILNNAISDTCVAMGEWVANPHTESALSNVLPCVDQRTTNKTLFQSKQVINNIANVVNT 361

Query: 367 FVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTC 426
           F+Y  AN N +Q     YNQ+GP MP LCYP+DSQ Q+RQC   EVS ANAS VW+NY C
Sbjct: 362 FIYATANINVTQGSPGSYNQSGPRMPTLCYPFDSQFQERQCTDQEVSSANASMVWKNYEC 421

Query: 427 ELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNI 486
           E+S SG      C +VGRVTP  Y ++V+AV EIYAL+ YTP LLSLQ+CNFVRD F  I
Sbjct: 422 EVSESGI-----CTTVGRVTPEIYLQIVAAVNEIYALEHYTPPLLSLQNCNFVRDAFTKI 476

Query: 487 TSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLP 538
           TS+YCPPL HYLKI+N GLG+IS GVLLCL+LWILYANRP+R EVF    LP
Sbjct: 477 TSSYCPPLNHYLKIINVGLGLISVGVLLCLVLWILYANRPRRREVFEKSSLP 528

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536222|ref|XP_003536638.1| PREDICTED: uncharacterized protein LOC100791428 [Glycine max]

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/540 (65%), Positives = 423/540 (78%), Gaps = 7/540 (1%)

Query: 1   MKMAFLTGKASFFVLVLVLVSLRSISALSQDGSGRDALKLILGEH--NLGPLKNGINEDA 58
           MK +   G     +L  V + L S+SA S  GS R  +K I+GE   NLG  K+ + + A
Sbjct: 1   MKASSFNGFWILLLLFPVSLFLSSVSAFSPTGSIRHPVKFIIGEEEENLGSWKSELTQVA 60

Query: 59  VAPGPEMLEPLLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWF 118
            APGP+  + L+LA+NRT RPDIL  F+RY+GGWDI ++HYWASVGFTGA+ FILAV+WF
Sbjct: 61  PAPGPKGEDVLILAANRTNRPDILRGFQRYRGGWDIADQHYWASVGFTGAAGFILAVLWF 120

Query: 119 ISFGLVLVAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEA 178
           ISFGL L+ H CCGW INIK K S  SQRICLILLI FT AAA GCILLSV QD+FHG+A
Sbjct: 121 ISFGLALMIHLCCGWGINIKDKGSNHSQRICLILLISFTFAAATGCILLSVAQDKFHGQA 180

Query: 179 MHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTL 238
           + TL Y VNQSDYTV+TLRNVTEYLSLAKTINV Q+ LPS VMD IDKLN DL++AA+TL
Sbjct: 181 LDTLHYFVNQSDYTVQTLRNVTEYLSLAKTINVTQILLPSDVMDGIDKLNVDLNSAADTL 240

Query: 239 ADKTSENSAKIRKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVA 298
           ++KT+ENS KIR+VFN VR AL  VAA+MLLL+++GL LS+L ++HAI IF+++GWLLVA
Sbjct: 241 SEKTNENSVKIRRVFNDVRLALYVVAAVMLLLALVGLVLSVLGYRHAILIFVITGWLLVA 300

Query: 299 ITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVIT 358
            TFILCGVF+ILNNAISDTCMAM EWV +P  E+ALSN+LPCVDQRTTNK+L QSK+VI 
Sbjct: 301 TTFILCGVFIILNNAISDTCMAMGEWVANPRTESALSNVLPCVDQRTTNKTLFQSKQVIN 360

Query: 359 DIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANAS 418
           +I +VVN F++  AN N +Q    YYNQ+GP MP LCYP+DSQ Q+RQC   EVS ANAS
Sbjct: 361 NIASVVNTFIFATANINETQGSPGYYNQSGPRMPSLCYPFDSQFQERQCTDQEVSSANAS 420

Query: 419 KVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNF 478
           +VW+NY CE+S SG      C +VGRVTP  Y ++V+AV E YAL+ YTP LLSLQ+CNF
Sbjct: 421 RVWKNYECEVSESGI-----CTTVGRVTPQIYLQIVAAVNESYALEHYTPPLLSLQNCNF 475

Query: 479 VRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLP 538
           VRD F  ITS+YCPPL HYLKI+N GLG+IS GVLLCL+LWILYANRP+R EVF    LP
Sbjct: 476 VRDAFTKITSSYCPPLNHYLKIINVGLGLISVGVLLCLVLWILYANRPRRREVFEKSSLP 535

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566456|ref|XP_003551447.1| PREDICTED: uncharacterized protein LOC100819610 [Glycine max]

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/519 (66%), Positives = 417/519 (80%), Gaps = 8/519 (1%)

Query: 12  FFVLVLVLVSLRSISALSQDGSGRDALKLILG--EHNLGPLKNGINEDAVAPGPEMLEPL 69
            F+  LVL S+  ISALS  GS + ++K ILG    NLGP KNG+ + A A  P     L
Sbjct: 13  LFIFPLVL-SVHLISALSPTGSAKHSIKFILGWRGQNLGPWKNGVTQVAQAARPRTKGTL 71

Query: 70  LLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHH 129
           +LA+NRT RPDIL+ FRRYQGGWDI N+HYWASVGFTG +   LAV+WFISFGL LV H 
Sbjct: 72  VLAANRTNRPDILHGFRRYQGGWDIANRHYWASVGFTGVAGLTLAVLWFISFGLALVIHL 131

Query: 130 CCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQS 189
           CCGW INIK K S   QRI  +LL++FTC    GCI+LS GQD+FHGEA+ TL YVVNQS
Sbjct: 132 CCGWGINIKDKGSNRLQRIWFVLLLLFTCVVTTGCIVLSFGQDKFHGEAVDTLHYVVNQS 191

Query: 190 DYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKI 249
           DYTV+TLRNVTEYL+LAKTI VA++FLPS +MDDIDKLN DL++AANTL+++T ENS KI
Sbjct: 192 DYTVQTLRNVTEYLALAKTIAVAEMFLPSNIMDDIDKLNVDLNSAANTLSEQTKENSFKI 251

Query: 250 RKVFNAVRSALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVI 309
           RKVFNAVR ALI ++A+MLLL++IGL LSIL ++HAI +F++SGWLLVA TFILCGVF I
Sbjct: 252 RKVFNAVRLALIMMSAMMLLLALIGLILSILGYQHAILVFVISGWLLVATTFILCGVFTI 311

Query: 310 LNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVY 369
           LNNAI DTCMAM EWV++PHAE+ALSNILPCVDQRTTNK+L QSK+V+T+IV++VN+F+Y
Sbjct: 312 LNNAICDTCMAMGEWVENPHAESALSNILPCVDQRTTNKTLFQSKQVVTNIVSIVNRFIY 371

Query: 370 NIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELS 429
           + A+A+P+Q  + YYNQ+GP MPPLCYP+DSQ ++RQC   EVS ANAS VW+ Y C+  
Sbjct: 372 DTADASPAQGSMNYYNQSGPAMPPLCYPFDSQFRERQCTPQEVSSANASLVWKRYECK-- 429

Query: 430 TSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSN 489
              +S +G C ++GRVTP  Y ELV  V E YAL+ YTP LLSLQ+CNFVR TF+ ITS 
Sbjct: 430 ---TSEYGVCTTIGRVTPEIYLELVQVVNESYALEHYTPLLLSLQNCNFVRHTFKEITSR 486

Query: 490 YCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQR 528
           YCPPL HYLK++N GLG+IS GVLLCL+LWILYANRPQ+
Sbjct: 487 YCPPLNHYLKVINVGLGLISIGVLLCLVLWILYANRPQK 525

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472887|ref|XP_002280363.2| PREDICTED: uncharacterized protein LOC100254373 [Vitis vinifera]

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/520 (68%), Positives = 419/520 (80%), Gaps = 10/520 (1%)

Query: 24  SISALSQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPEMLEP---LLLASNRTKRPD 80
           SISA+S     R     ILGE NLG  K  I+  A APGP    P   L+LA+ RT RPD
Sbjct: 20  SISAISPSLDWRS--NFILGEENLGSWKGEISRGAQAPGPANNGPQSTLVLAAKRTNRPD 77

Query: 81  ILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGK 140
           IL  F+RY+GGWDITN+HYWASVGFTGA  FILA +W +SFGL LV H+CCGWRIN KG 
Sbjct: 78  ILRGFKRYRGGWDITNRHYWASVGFTGAFGFILAFLWLVSFGLALVVHYCCGWRINAKGN 137

Query: 141 ESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVT 200
            S  S+R+ LI+LI+FTCAAAIGCILLS+GQDEFH EA+HTL YVVNQSDYTV+TL NVT
Sbjct: 138 GSDHSERVSLIMLILFTCAAAIGCILLSIGQDEFHREALHTLHYVVNQSDYTVQTLINVT 197

Query: 201 EYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSAL 260
           +YL+LAKTI VAQV LPS V DDIDKLN DL+ AAN L +KTSENSAKI+KVFN V+SAL
Sbjct: 198 QYLTLAKTIKVAQVLLPSNVNDDIDKLNVDLNKAANDLKEKTSENSAKIKKVFNTVQSAL 257

Query: 261 ITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMA 320
           ITVAA+MLLLS++G FLSIL H+HAIH+FI+ GWLLV ITF+LCGVFVILNNAI+DTCMA
Sbjct: 258 ITVAAVMLLLSLLGFFLSILGHQHAIHVFIVGGWLLVVITFMLCGVFVILNNAITDTCMA 317

Query: 321 MDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDY 380
           M EW+D+P +E+ALSNILPCVDQRT+N++LI+SKEV+T+IVNVVNQF+Y  ANANPS   
Sbjct: 318 MGEWMDNPQSESALSNILPCVDQRTSNQTLIKSKEVVTNIVNVVNQFIYTYANANPSPTD 377

Query: 381 IYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCN 440
           + YYNQ+GP+MPPLCYPYDS LQDRQCGS EVS+ NAS VW+NY C       S  G CN
Sbjct: 378 LNYYNQSGPLMPPLCYPYDSNLQDRQCGSIEVSMENASVVWKNYVCT-----KSELGLCN 432

Query: 441 SVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKI 500
           + GRVT   Y +LV+AV E YAL+ YTP LLSLQ+CNFV+DTF+ I + YC PLEH L++
Sbjct: 433 NEGRVTQDTYTQLVAAVNESYALEHYTPLLLSLQNCNFVQDTFREIKTRYCHPLEHDLQM 492

Query: 501 VNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIK 540
           V+AGLG+IS GV+LCL+LWI YAN PQRE VFV L  PI+
Sbjct: 493 VDAGLGLISVGVMLCLVLWIFYANHPQREGVFVTLFSPIR 532

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737727|emb|CBI26928.3| unnamed protein product [Vitis vinifera]

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/520 (68%), Positives = 419/520 (80%), Gaps = 10/520 (1%)

Query: 24  SISALSQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPEMLEP---LLLASNRTKRPD 80
           SISA+S     R     ILGE NLG  K  I+  A APGP    P   L+LA+ RT RPD
Sbjct: 142 SISAISPSLDWRS--NFILGEENLGSWKGEISRGAQAPGPANNGPQSTLVLAAKRTNRPD 199

Query: 81  ILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGK 140
           IL  F+RY+GGWDITN+HYWASVGFTGA  FILA +W +SFGL LV H+CCGWRIN KG 
Sbjct: 200 ILRGFKRYRGGWDITNRHYWASVGFTGAFGFILAFLWLVSFGLALVVHYCCGWRINAKGN 259

Query: 141 ESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVT 200
            S  S+R+ LI+LI+FTCAAAIGCILLS+GQDEFH EA+HTL YVVNQSDYTV+TL NVT
Sbjct: 260 GSDHSERVSLIMLILFTCAAAIGCILLSIGQDEFHREALHTLHYVVNQSDYTVQTLINVT 319

Query: 201 EYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSAL 260
           +YL+LAKTI VAQV LPS V DDIDKLN DL+ AAN L +KTSENSAKI+KVFN V+SAL
Sbjct: 320 QYLTLAKTIKVAQVLLPSNVNDDIDKLNVDLNKAANDLKEKTSENSAKIKKVFNTVQSAL 379

Query: 261 ITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMA 320
           ITVAA+MLLLS++G FLSIL H+HAIH+FI+ GWLLV ITF+LCGVFVILNNAI+DTCMA
Sbjct: 380 ITVAAVMLLLSLLGFFLSILGHQHAIHVFIVGGWLLVVITFMLCGVFVILNNAITDTCMA 439

Query: 321 MDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDY 380
           M EW+D+P +E+ALSNILPCVDQRT+N++LI+SKEV+T+IVNVVNQF+Y  ANANPS   
Sbjct: 440 MGEWMDNPQSESALSNILPCVDQRTSNQTLIKSKEVVTNIVNVVNQFIYTYANANPSPTD 499

Query: 381 IYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCN 440
           + YYNQ+GP+MPPLCYPYDS LQDRQCGS EVS+ NAS VW+NY C       S  G CN
Sbjct: 500 LNYYNQSGPLMPPLCYPYDSNLQDRQCGSIEVSMENASVVWKNYVCT-----KSELGLCN 554

Query: 441 SVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKI 500
           + GRVT   Y +LV+AV E YAL+ YTP LLSLQ+CNFV+DTF+ I + YC PLEH L++
Sbjct: 555 NEGRVTQDTYTQLVAAVNESYALEHYTPLLLSLQNCNFVQDTFREIKTRYCHPLEHDLQM 614

Query: 501 VNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIK 540
           V+AGLG+IS GV+LCL+LWI YAN PQRE VFV L  PI+
Sbjct: 615 VDAGLGLISVGVMLCLVLWIFYANHPQREGVFVTLFSPIR 654

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297838929|ref|XP_002887346.1| hypothetical protein ARALYDRAFT_476243 [Arabidopsis lyrata subsp. lyrata] gi|297333187|gb|EFH63605.1| hypothetical protein ARALYDRAFT_476243 [Arabidopsis lyrata subsp. lyrata]

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/523 (64%), Positives = 412/523 (78%), Gaps = 13/523 (2%)

Query: 26  SALSQDGSGRDALKLILGEHNLGPLKNGINEDAVAPGPE----MLEPLLLASNRTKRPDI 81
           S  S   + +D LKLILG  N G  K GI   ++APGP     + + LLLA++RTKRPDI
Sbjct: 22  SVDSSVAASQDPLKLILGSPNFGSWKGGI---SLAPGPSSDDVVSDYLLLAAHRTKRPDI 78

Query: 82  LNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKE 141
           L  F+ Y GGW+ITN HYWASVGFTGA  FILAVIW +SFG +LV +HC  WR+ +K K 
Sbjct: 79  LRAFKPYHGGWNITNNHYWASVGFTGAPGFILAVIWLLSFGSLLVVYHCFKWRLCVKAKG 138

Query: 142 SA-SSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVT 200
           S+  S+R C ILLIVFTC AA+GCILLSVGQD+FH EAM TLKYVVNQSDYTV+ L+NVT
Sbjct: 139 SSFDSRRFCFILLIVFTCVAAVGCILLSVGQDKFHTEAMRTLKYVVNQSDYTVEILQNVT 198

Query: 201 EYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSAL 260
           +YLSLAKTINV  + +P  VMD+IDKLN +L+ AA TL +KT + +AKI++V  AVRSAL
Sbjct: 199 QYLSLAKTINVTAISIPPNVMDEIDKLNVNLNNAAVTLGEKTPDTAAKIKRVVYAVRSAL 258

Query: 261 ITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMA 320
           ITVA +ML+LS +GL LS+LRH+H +HIF++SGW+LVA+TF+LCGVF+ILNNAISDTC+A
Sbjct: 259 ITVATVMLILSFVGLLLSVLRHQHVVHIFVVSGWILVAVTFVLCGVFLILNNAISDTCVA 318

Query: 321 MDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDY 380
           M EWVDHPHAETALS+ILPCVDQ+TTN++L QSK VI  IV VVN FVY +AN NPS   
Sbjct: 319 MKEWVDHPHAETALSSILPCVDQQTTNQTLAQSKVVINSIVTVVNTFVYAVANTNPSPGQ 378

Query: 381 IYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCN 440
             YYNQ+GP MPPLC P+D+ ++DRQC  +E+SI NAS VW+NY CE++ SG      C 
Sbjct: 379 DRYYNQSGPPMPPLCIPFDANMEDRQCSPWELSIENASSVWENYQCEVTQSGV-----CT 433

Query: 441 SVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKI 500
           +VGRVTP  + +LV+AV E YAL+ YTP+LLS +DCNFVRDTF++ITS+YCPPLE  L+I
Sbjct: 434 TVGRVTPDTFGQLVAAVNESYALEHYTPQLLSFRDCNFVRDTFKSITSDYCPPLERNLRI 493

Query: 501 VNAGLGMISFGVLLCLLLWILYANRPQREEVFVNLPLPIKCIS 543
           V AGLG+IS GVLLCL+LWI YANRPQR+EVF +    +K +S
Sbjct: 494 VTAGLGLISVGVLLCLVLWIFYANRPQRKEVFADPHPQVKDVS 536

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	555
TAIR|locus:2026276	557	AT1G71110 "AT1G71110" [Arabido	0.895	0.892	0.639	6.1e-174
TAIR|locus:2046079	541	AT2G12400 "AT2G12400" [Arabido	0.821	0.842	0.408	3.5e-98
TAIR|locus:2059567	545	AT2G25270 [Arabidopsis thalian	0.861	0.877	0.377	1.9e-92
TAIR|locus:2198923	538	AT1G80540 "AT1G80540" [Arabido	0.809	0.834	0.335	1.7e-75
TAIR|locus:2158581	509	AT5G67550 "AT5G67550" [Arabido	0.771	0.840	0.217	9.6e-20

TAIR|locus:2026276 AT1G71110 "AT1G71110" [Arabidopsis thaliana (taxid:3702)]

 Score = 1690 (600.0 bits), Expect = 6.1e-174, P = 6.1e-174
 Identities = 327/511 (63%), Positives = 399/511 (78%)

Query:    33 SGRDALKLILGEHNLGPLKNGINEDAVAPGPE----MLEPLLLASNRTKRPDILNHFRRY 88
             + +D L+LILG  N G  K GI+   +APGPE    + + LLLA++RTKRPDIL  F+ Y
Sbjct:    29 ASQDPLRLILGSPNFGTWKGGIS---LAPGPESDDVVSDYLLLAAHRTKRPDILRAFKPY 85

Query:    89 QGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESA-SSQR 147
              GGW+ITN HYWASVGFTGA  FILAVIW +SFG +LV +HC  WRI  K K S+  ++R
Sbjct:    86 HGGWNITNNHYWASVGFTGAPGFILAVIWLLSFGSLLVVYHCFKWRICDKAKGSSFDTRR 145

Query:   148 ICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAK 207
             IC ILLIVFTC AA+GCILLSVGQD+FH EAMHTLKYVVNQSDYTV+ L+NVT+YLSLAK
Sbjct:   146 ICFILLIVFTCVAAVGCILLSVGQDKFHTEAMHTLKYVVNQSDYTVEILQNVTQYLSLAK 205

Query:   208 TINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAAXX 267
             TINV Q+ +PS VM +IDKLN +L+TAA TL + T++N+AKI++VF AVRSALITVA   
Sbjct:   206 TINVTQIVIPSDVMGEIDKLNVNLNTAAVTLGETTTDNAAKIKRVFYAVRSALITVATVM 265

Query:   268 XXXXXXXXXXXXXRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDH 327
                          RH+H +HIF++SGW+LVA+TF+LCGVF+ILNNAISDTC+AM EWVD+
Sbjct:   266 LILSFVGLLLSVLRHQHVVHIFVVSGWILVAVTFVLCGVFLILNNAISDTCVAMKEWVDN 325

Query:   328 PHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQT 387
             PHAETALS+ILPCVDQ+TTN++L QSK VI  IV VVN FVY +AN NP+     YYNQ+
Sbjct:   326 PHAETALSSILPCVDQQTTNQTLSQSKVVINSIVTVVNTFVYAVANTNPAPGQDRYYNQS 385

Query:   388 GPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTP 447
             GP MPPLC P+D+ ++DRQC  +E+SI NAS VW+NY CE++ SG      C +VGRVTP
Sbjct:   386 GPPMPPLCIPFDANMEDRQCSPWELSIENASSVWENYKCEVTPSGI-----CTTVGRVTP 440

Query:   448 YFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGM 507
               + +LV+AV E YAL+ YTP LLS +DCNFVR+TF +ITS+YCPPL   L+IVNAGLG+
Sbjct:   441 DTFGQLVAAVNESYALEHYTPPLLSFRDCNFVRETFMSITSDYCPPLVRNLRIVNAGLGL 500

Query:   508 ISFGVLLCLLLWILYANRPQREEVFVNLPLP 538
             IS GVLLCL+LWI YANRPQREEVF + P P
Sbjct:   501 ISVGVLLCLVLWIFYANRPQREEVFAD-PHP 530

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2046079 AT2G12400 "AT2G12400" [Arabidopsis thaliana (taxid:3702)]

 Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
 Identities = 191/468 (40%), Positives = 294/468 (62%)

Query:    69 LLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGL---VL 125
             L+LA+ RT+R D  ++F+ Y GGW+I+N HY  SVG+T A   I+A++WF+ FGL   ++
Sbjct:    65 LILAAKRTRRKDPADNFKLYTGGWNISNSHYLTSVGYTAAPFIIIALVWFVFFGLSLSLI 124

Query:   126 VAHHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYV 185
                +CC  R +  G  S  +  + LILLI FT AA IGC+ L  GQ +FH     TL YV
Sbjct:   125 CLCYCCCARQSY-GY-SRVAYALSLILLISFTIAAIIGCVFLYTGQGKFHASTTDTLDYV 182

Query:   186 VNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSEN 245
             V+Q++ T + LRNV++YL+ AK ++V    LP  V+  ID +   ++++A TL+ KT EN
Sbjct:   183 VSQANLTSENLRNVSDYLNAAKKVDVQSSILPQDVLSSIDNIQGKINSSATTLSVKTMEN 242

Query:   246 SAKIRKVFNAVRSALITVAAXXXXXXXXXXXXXXXRHKHAIHIFILSGWLLVAITFILCG 305
               KI+ V + +R AL+ +AA                 +  ++  ++ GW+LV +TF+LCG
Sbjct:   243 QDKIQNVLDIMRLALVIIAAVMLFLAFIGFLLSIFGLQCLVYTLVILGWILVTVTFVLCG 302

Query:   306 VFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVN 365
              F++L+N + DTC+AMD+WV +P A TAL +ILPCVD  T  ++L ++K V   +VN+++
Sbjct:   303 GFLLLHNVVGDTCVAMDQWVQNPTAHTALDDILPCVDNATARETLTRTKLVTYQLVNLLD 362

Query:   366 QFVYNIANAN-PSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNY 424
               + N+ N N P Q    YYNQ+GP+MP LC P+++ L DRQC   +V + NA++VW+N+
Sbjct:   363 NAISNMTNRNFPPQFRPLYYNQSGPLMPLLCNPFNADLSDRQCQPGQVHLNNATEVWKNF 422

Query:   425 TCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQ 484
             TC++ T G+     C++ GR+TP  Y ++ +AV   Y L  Y P L  LQ C+FVR TF 
Sbjct:   423 TCQIVTPGT-----CSTPGRLTPKLYSQMAAAVNVSYGLYKYGPFLADLQGCDFVRSTFT 477

Query:   485 NITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQREEVF 532
             +I  ++CP L+ Y + +  GL ++S  V+  L+ W++YA R +R  V+
Sbjct:   478 DIERDHCPGLKRYTQWIYVGLVVVSASVMSSLVFWVIYA-RERRHRVY 524

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2059567 AT2G25270 [Arabidopsis thaliana (taxid:3702)]

 Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
 Identities = 189/501 (37%), Positives = 299/501 (59%)

Query:    38 LKLILGEHNL-GPLKNGINEDAVAPGPEMLE--PLLLASNRTKRPDILNHFRRYQGGWDI 94
             +K I+ E  L GP   G N       P+++E   + LA+ RT R D LN F +Y GGW+I
Sbjct:    44 MKFIVAEAPLLGPA--GFNN------PQVIEVASVALAAQRTYRKDPLNGFEKYTGGWNI 95

Query:    95 TNKHYWASVGFTGASAFILAVIWFISFG---LVLVAHHCCGWRINIKGKESASSQRICLI 151
             +N+HYWASV +T    F+LA +WF+ FG   LV+   H C  R N  G  S  +  + LI
Sbjct:    96 SNQHYWASVSYTAVPLFVLAAVWFLGFGICLLVICMCHICH-RTNSVGY-SKVAYVVSLI 153

Query:   152 LLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINV 211
              L++FT  A IGC+LL  GQ  ++     TL+YV++Q+D T+  LR +++YL+ AK   V
Sbjct:   154 FLLIFTVIAIIGCVLLYSGQIRYNKSTTETLEYVMSQADSTISQLRAISDYLASAKQAAV 213

Query:   212 AQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALITVAAXXXXXX 271
              QV LP+ V  +ID++   L ++  T+ +K++ +S  IR   ++VR ALI V+       
Sbjct:   214 LQVLLPANVQTEIDQIGVKLDSSVATITEKSTNSSNHIRHFLDSVRVALIVVSIVMLVVT 273

Query:   272 XXXXXXXXXRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHPHAE 331
                        +  ++  ++ GW+LV  TFIL G F++L+NA +DTC+AM EWV+ P + 
Sbjct:   274 FLGLVSSIFGMQVIVYTLVILGWILVTGTFILSGTFLVLHNATADTCVAMSEWVERPSSN 333

Query:   332 TALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYI-YYYNQTGPV 390
             TAL  ILPC D  T  ++L++S+EV   +V ++N  + N++N N S  ++  YYNQ+GP+
Sbjct:   334 TALDEILPCTDNATAQETLMRSREVTGQLVELINTVITNVSNINFSPVFVPMYYNQSGPL 393

Query:   391 MPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFY 450
             +P LC P++  L DR C   ++ + NA++ W ++ C++S +G+     C + GR+TP  Y
Sbjct:   394 LPLLCNPFNHDLTDRSCSPGDLDLNNATEAWTSFVCQVSQNGT-----CTTTGRLTPALY 448

Query:   451 KELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISF 510
              ++ S V     L    P L+ LQDC++ + TF++IT+++CP L+ Y   V  GL +++ 
Sbjct:   449 SQMASGVNISTGLIRDAPFLVQLQDCSYAKQTFRDITNDHCPGLQRYGYWVYVGLAILAT 508

Query:   511 GVLLCLLLWILYAN-RPQREE 530
              V+L L+ WI+Y+  R  R+E
Sbjct:   509 AVMLSLMFWIIYSRERRHRKE 529

GO:0005576 "extracellular region" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0031507 "heterochromatin assembly" evidence=RCA

GO:0045787 "positive regulation of cell cycle" evidence=RCA

TAIR|locus:2198923 AT1G80540 "AT1G80540" [Arabidopsis thaliana (taxid:3702)]

 Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
 Identities = 158/471 (33%), Positives = 258/471 (54%)

Query:    69 LLLASNRTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAH 128
             L+LA+ RT+RPD LNHF  Y  GW++TN HY ASVGF+     ++A+ WF+  GL L+  
Sbjct:    64 LVLAAERTQRPDPLNHFNIYVDGWNVTNSHYIASVGFSAVPFIVIAIAWFVLLGLFLICS 123

Query:   129 H----CCGWRINIKGKESASSQRIC----LILLIVFTCAAAIGCILLSVGQDEFHGEAMH 180
                  CCG      G+ +    R+C    L+ L++FT AA IG  +L  GQ+EF+G    
Sbjct:   124 CLCCCCCGC-----GRRNYGYSRVCYTLSLVFLLLFTIAAVIGSAMLYTGQNEFYGSVER 178

Query:   181 TLKYVVNQSDYTVKTLRNVTEYLSLAKTINV-AQVFLPSAVMDDIDKLNRDLSTAANTLA 239
             T  Y+V Q+   +  L ++ + +  AK I +      P     +ID  N  +  +  T  
Sbjct:   179 TFMYIVKQATGVLTKLTSLWDSIQSAKDIQLDGHNLFPPEFRGNIDHFNNMIKMSNITYP 238

Query:   240 DKTSENSAK-IRKVFNAVRSALITVAAXXXXXXXXXXXXXXXRHKHAIHIFILSGWLLVA 298
             D+ +  + + +    N VR  L  +A                  +  +++ ++ GW+LV 
Sbjct:   239 DRVANQTIRYLTGALNPVRYVLNVIAGVMLAVAFLGLLFSFCGLRVLVYLLVILGWILVT 298

Query:   299 ITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVIT 358
              T +L  VF++ +N ++DTCMAMD+WV  P A++ALS +LPC+D +T  ++L  +K +  
Sbjct:   299 ATILLSAVFLVFHNVVADTCMAMDQWVHDPAADSALSQLLPCLDPKTIGETLDITKTMTA 358

Query:   359 DIVNVVNQFVYNIANANP-SQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANA 417
               V++ N +  N++N +    +  +Y+NQ+GP++P LC P D   + R C   EV +ANA
Sbjct:   359 TAVDMTNAYTVNVSNHDQFPPNAPFYHNQSGPLVPLLCNPLDQNHKPRPCAPDEVLLANA 418

Query:   418 SKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVTEIYALQLYTPRLLSLQDCN 477
             S+V++ Y C+++  G      C + GR+T   Y +++ A+   + L  Y P L S+ DC 
Sbjct:   419 SQVYKGYICQVNAEGI-----CTTQGRLTQGSYDQMMGAINVAFTLDHYGPFLASIADCT 473

Query:   478 FVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYANRPQR 528
             FVRDTF++IT+  CP L    + + AGL  +S  V+  L+ W+++  R +R
Sbjct:   474 FVRDTFRDITTKNCPGLSITSQWIYAGLASLSGAVMFSLIFWLIFV-RERR 523

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2158581 AT5G67550 "AT5G67550" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 9.6e-20, P = 9.6e-20
 Identities = 102/469 (21%), Positives = 193/469 (41%)

Query:    75 RTKRPDILNHFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWR 134
             R KR D LN FR Y GG+++ NKHYWA+  FTG   + +A       G++++   C G  
Sbjct:    36 RFKRRDPLNSFRYYDGGFNVRNKHYWAATAFTGIHGYAVA-------GVLIIVGICLGLY 88

Query:   135 INIKGKES--ASSQR----------ICLILLIVFTCAAAIGCILLSVGQDEFHGEAM-HT 181
             +    K    +S++R            L+LL +F      G ++ +  + +   E M  T
Sbjct:    89 VAFSDKRRRVSSTRRRYLDRYYLPLFLLLLLFMFLSVVTTGIVIAANQRSKNRTEEMKET 148

Query:   182 LKYV---VNQSDYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTL 238
             +      VNQ+  TV       +YL L    N   +   +     + K +R + +  +  
Sbjct:   149 IDKAGEDVNQNIRTVIVSLTKIQYLLLPYDQNTTHLL--NVTTHRLGKGSRLIQSFLHHK 206

Query:   239 ADKTSENSAKIRKVFNAVRSALITVAAXXXXXXXXXXXXXXXRHKHAIHIFILSGWLLVA 298
               ++ + + KI  V     S L+  +                 H   I +  L  W++  
Sbjct:   207 G-RSIDLAIKISYV-----SHLMITSTNLFLLLLAFLPLLLHWHPGFIMVIFLC-WIITT 259

Query:   299 ITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVIT 358
             + ++L G    ++    D C A + +V +P   T L+N+ PC+D   ++K+LI+   +I 
Sbjct:   260 LCWVLTGFDFFIHTFAEDLCSAFNGFVQNPRNST-LTNLFPCMDPLHSDKTLIEISLMIH 318

Query:   359 DIVNVVNQFVYNIANANPSQDY---IYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIA 415
             + +  +N  V     +N   D    + +  ++G +  P      +    + C +  + I 
Sbjct:   319 NFITQLNSKVAESMRSNALTDRSNTVSWAPESGIICDPFVGQQINSYTPQSCSNGAIPIG 378

Query:   416 NASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYF-YKELVSAVTEIYALQLYTPRLLSLQ 474
                 +   +TC       +    C   G+  P   Y ++ +       +    P   +L 
Sbjct:   379 EFPNILSRFTCHDKDPPET----CRITGKFIPEAAYLKVYAYSNSAQGMLDILPSFQNLT 434

Query:   475 DCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILYA 523
             +C  V+DT  +I SN C P    +  + A +  +S  +++ +LL++  A
Sbjct:   435 ECLAVKDTLSSIVSNQCDPFRASMYRLWASILALSLIMVVLVLLFLAKA 483


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.136   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      555       520   0.00089  119 3  11 22  0.49    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  320 KB (2163 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  43.74u 0.11s 43.85t   Elapsed:  00:00:02
  Total cpu time:  43.75u 0.11s 43.86t   Elapsed:  00:00:02
  Start:  Fri May 10 18:19:30 2013   End:  Fri May 10 18:19:32 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	555
cd07912	418	Tweety_N N-terminal domain of the protein encoded	100.0
PF04906	406	Tweety: Tweety; InterPro: IPR006990 None of the me	99.93
KOG4433	526	consensus Tweety transmembrane/cell surface protei	99.84
PF05478	806	Prominin: Prominin; InterPro: IPR008795 The promin	99.31
KOG4331	865	consensus Polytopic membrane protein Prominin [Gen	98.52
KOG4433	526	consensus Tweety transmembrane/cell surface protei	97.53
cd07912	418	Tweety_N N-terminal domain of the protein encoded	97.41
PF04906	406	Tweety: Tweety; InterPro: IPR006990 None of the me	97.38
PF05478	806	Prominin: Prominin; InterPro: IPR008795 The promin	92.82

>cd07912 Tweety_N N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels

Probab=100.00  E-value=2.1e-34  Score=307.26  Aligned_cols=355  Identities=17%  Similarity=0.209  Sum_probs=229.9

Q ss_pred             ccccccCcccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhCCcccCC---CCCC-chhHHHHHHHHHHHHHH
Q 008737           84 HFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIK---GKES-ASSQRICLILLIVFTCA  159 (555)
Q Consensus        84 ~f~~Y~GG~nI~nkhYwaSV~fTgipg~~iA~~Wfi~fGl~l~~~~cc~~~~~~k---~~~s-~~~~~i~lilLllfTi~  159 (555)
                      .|+..++.||++||||||||+|||    +||++||+++|+++++.+||+|||+++   +|++ ..++.+++   ++++++
T Consensus        20 ~f~~v~~~F~p~~~~Y~~Sv~~~a----~iaavwlil~ll~ll~~~~~~CCcr~~~~~~k~~s~~c~~~sL---iiltL~   92 (418)
T cd07912          20 TFHRVNSTFNPEDEIYQQSLLILA----SIPAACLILSLLFLLVYLITRCCDRKPTEERPRHSICCLKWSL---VIATLL   92 (418)
T ss_pred             eEEecCCCCCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCccHHHHHH---HHHHHH
Confidence            478889999999999999999999    499999998888877655544444333   2222 23444444   444444


Q ss_pred             HHHHHhhhhcccccccccchhhhhHHhccchhHHHHHHHHHHHHhhhhhcccc-------cccc-c---cchhhhHHHHH
Q 008737          160 AAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVA-------QVFL-P---SAVMDDIDKLN  228 (555)
Q Consensus       160 ai~Gcivl~~Gn~kfh~~~~~t~~~vv~qa~~tv~tLrNVt~~L~~ak~~~V~-------~i~l-P---~dv~~~Id~l~  228 (555)
                      +++|.+++|+||++||++++++.+++ +++|+++++++|++++++++-+..++       .++. |   .+..+.++.++
T Consensus        93 ~~aaIi~~f~GN~~~h~gV~~t~~si-~~an~tv~~l~nqv~~l~~al~~t~~~~L~~L~~il~~~~~~~~~~~~~~~~q  171 (418)
T cd07912          93 CCAAIGVGLYGNDETHDGVVQLTYSL-RNANHTVAGIDNQTSDTEASLNVTVEPQLTNLEDIFDARVNKTDYLQIVQGLQ  171 (418)
T ss_pred             HHHHHHHHhhccHHHhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHhCCCcchhhHHHHHHHHH
Confidence            55565669999999999999999988 89999999999999999876543343       2222 2   12233334444


Q ss_pred             HHHHHHHHHhhHH-----hHHhhHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHHHHHH
Q 008737          229 RDLSTAANTLADK-----TSENSAKIRKVFNAV---RS-ALITVAALMLLLSIIGLFLSIL-RHKHAIHIFILSGWLLVA  298 (555)
Q Consensus       229 ~~Lns~A~~L~~k-----i~~n~~~I~~~Ld~V---~~-~l~~vaavmL~La~lGlv~~~~-~~~~~~~~~~i~gwilv~  298 (555)
                      ..+.+..+++.+-     ...|+.+|.+-.+.+   |. +.+.+..+.++++++++ +|+. +.|+.+++|+++|.+.++
T Consensus       172 ~~~~n~~~~~~~~~~~~~~~~~l~~i~~~~~~~E~~Rw~~~l~lL~~~lviC~~~l-~gl~r~Sr~~li~~s~~g~l~l~  250 (418)
T cd07912         172 QMATNAAQQLTGIPFWSLVGVSLTKLADQVSLYESYRWLAYLGLLSLLLVICLVLL-VGLARHSRCLLIVFSVCGLFALI  250 (418)
T ss_pred             HHHHHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHH
Confidence            5555555444322     123333333333332   31 12333334445555543 5555 578999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhhhHhhHhhhhCCCCCCccccc----ccCCcccchhh---HHHHhHHHHHHHHHHHHHHHHHH
Q 008737          299 ITFILCGVFVILNNAISDTCMAMDEWVDHPHAETALSNI----LPCVDQRTTNK---SLIQSKEVITDIVNVVNQFVYNI  371 (555)
Q Consensus       299 ~twil~Gv~l~l~~~~~DtC~Am~e~~~~p~~~t~L~~i----LPCvd~~~a~~---~L~~sk~~i~~lv~~vN~~i~~i  371 (555)
                      ++|++.|+|++.+++++|.|.++++|+.+.+..+-..|+    +.|.... +|+   .|.+++..+.+.-+++.....  
T Consensus       251 ~~W~~~~~~l~~~v~~sDfC~~pd~yi~~~~~~~~~~di~~yy~~C~~~~-~npF~~~l~~~~~~l~~~~~~~~~~~~--  327 (418)
T cd07912         251 ISWLSLGLYLASAVALSDFCVDPDDYVRNQTPSGLSSDILQYYLTCEPST-TNPFQQRLTESQRALTNMQSQVQGLLR--  327 (418)
T ss_pred             HHHHHHHHHHHHHHhhhhhhcCHHHHHHhccccccchHHHHHHhcCCCCC-CCcchHhhHHHHHHHHHHHHHHHHHHH--
Confidence            999999999999999999999999999998743212222    3454322 111   222222222222222221111  


Q ss_pred             hccCCCCCcccccccCCCCCCCCCCCCCCCcccccCCCCcccccchhcccccceeecCCCCCCCcccccCCCccchhHHH
Q 008737          372 ANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYK  451 (555)
Q Consensus       372 ~n~n~~~~~~~y~nqsgp~~p~lCnPf~~~~~~~~C~~gev~i~na~~v~~~~~C~~~~~~~~~~~~C~t~gr~tp~~y~  451 (555)
                                                                          ..   -.       .+.+..    +...
T Consensus       328 ----------------------------------------------------~~---~~-------~~~~~~----~~l~  341 (418)
T cd07912         328 ----------------------------------------------------EA---VF-------EFPTAE----DNLL  341 (418)
T ss_pred             ----------------------------------------------------Hh---cc-------cCCccc----chHH
Confidence                                                                00   00       000000    1134


Q ss_pred             HHHHHHHHHHHHHhhccccccCCCchhHHHHHhhcccCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008737          452 ELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL  521 (555)
Q Consensus       452 q~~a~~n~~~~L~~~~P~l~~L~~C~fVrdtF~~I~~~~C~~L~~~~~~v~~gl~~lS~~~~l~~i~Wi~  521 (555)
                      +++.-.|+....++   .|+.++||.-+++-+.+.....|-+-..++-.+  .+..+.+|.+++++.|+.
T Consensus       342 ~~~~~ln~~e~~l~---~l~a~ldCr~~h~~Y~~a~~g~C~~gl~Gl~~~--~l~s~~~a~~~~~lv~~~  406 (418)
T cd07912         342 SLQGDLNSTEINLH---QLTALLDCRGLHKDYVEALRGLCYDGLEGLLYL--LLFSLLAALLFTILVCVD  406 (418)
T ss_pred             HHHHHHHHHHHHHH---HHHhhcchHHHHHHHHHHHHccccchHHHHHHH--HHHHHHHHHHHHHHHHhc
Confidence            56666677666655   888999999999999999999999998887666  666777778888888776

The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins.

>PF04906 Tweety: Tweety; InterPro: IPR006990 None of the members of the tweety (tty) family have been functionally characterised

Probab=99.93  E-value=7.8e-24  Score=226.87  Aligned_cols=357  Identities=13%  Similarity=0.171  Sum_probs=212.9

Q ss_pred             cccccCcccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhCCcccCCCC--CCchhHHHHHHHHHHHHHHHHH
Q 008737           85 FRRYQGGWDITNKHYWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGK--ESASSQRICLILLIVFTCAAAI  162 (555)
Q Consensus        85 f~~Y~GG~nI~nkhYwaSV~fTgipg~~iA~~Wfi~fGl~l~~~~cc~~~~~~k~~--~s~~~~~i~lilLllfTi~ai~  162 (555)
                      ||..++.|++.|+.|-+|++|-|    .+|++|++. -+++++.+.||+||+||++  .+++.-.+..+.+++.++++.+
T Consensus         1 ~~~~~~~F~p~~~~Y~qsL~~la----~v~~~~l~l-~Ll~ll~yl~~~CC~r~~~~~~~~~~~~c~~~~~~ia~lvc~a   75 (406)
T PF04906_consen    1 FQPVSSTFNPQDEEYQQSLLILA----SVAAACLAL-SLLFLLIYLICRCCCRRPREEKSSRRCCCLTWSLVIATLVCCA   75 (406)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHH----HHHHHHHHH-HHHHHHHHHHHHhhCCCCCccccccCCcchHHHHHHHHHHHHH
Confidence            78889999999999999999988    678888874 3333332222222222222  1222112333445556666667


Q ss_pred             HHhhhhcccccccccchhhhhHHhccchhHHHHHHHHHHHHhhhhhcc-------ccccc-cccchhhhHHHHHHHHHHH
Q 008737          163 GCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTIN-------VAQVF-LPSAVMDDIDKLNRDLSTA  234 (555)
Q Consensus       163 Gcivl~~Gn~kfh~~~~~t~~~vv~qa~~tv~tLrNVt~~L~~ak~~~-------V~~i~-lP~dv~~~Id~l~~~Lns~  234 (555)
                      |.+++|+||++.|.++.+... -.+.++.+...+++.+...+..-...       ...++ .|.+..+.++++++.+++.
T Consensus        76 aigvG~yGN~e~~~gv~~~~~-s~~~~n~t~~~i~~~v~~~~~~l~~~v~~~l~~Le~~~~~~~~~~~~~~~~~~~~~~v  154 (406)
T PF04906_consen   76 AIGVGFYGNSETNDGVYQLIY-SLRNANHTLSGIDNLVSDTTEALNSTVEQHLTRLEEIFAKRTDLLQALQFLQQQAENV  154 (406)
T ss_pred             HHHcccccchhhhccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHH
Confidence            778899999999998876543 33344445444544443332211111       11222 3445555666666655555


Q ss_pred             HHHhhHHhH-----HhhHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHH
Q 008737          235 ANTLADKTS-----ENSAKIRKVFNAV---RS-ALITVAALMLLLSIIGLFLSILRHKHAIHIFILSGWLLVAITFILCG  305 (555)
Q Consensus       235 A~~L~~ki~-----~n~~~I~~~Ld~V---~~-~l~~vaavmL~La~lGlv~~~~~~~~~~~~~~i~gwilv~~twil~G  305 (555)
                      .+++.+-..     .+...+.+-.+.+   |. +.+.+..+++++++++++--..+.|+.++.+.++|++.++++|++.|
T Consensus       155 ~~~l~~l~~~~~~~~~l~~~~~~~~~~E~yRw~~~~~lL~l~l~icl~~l~glar~Sk~~li~~~v~gll~lvisW~~~g  234 (406)
T PF04906_consen  155 VQQLDELPFWRNVSLSLEQLAEQVSFYEYYRWLAYLGLLILDLVICLLGLLGLARQSKCLLIVFSVLGLLALVISWISLG  234 (406)
T ss_pred             HHHHhcCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEeeeccHHHHHHHHHHHH
Confidence            555432211     1222222222222   22 23444455566666654433446788899999999999999999999


Q ss_pred             HHHHHHhhhhhhhHhhHhhhhCCCCCCccccc----ccCCcccchhh---HHHHhHHHHHHHHHHHHHHHHHHhccCCCC
Q 008737          306 VFVILNNAISDTCMAMDEWVDHPHAETALSNI----LPCVDQRTTNK---SLIQSKEVITDIVNVVNQFVYNIANANPSQ  378 (555)
Q Consensus       306 v~l~l~~~~~DtC~Am~e~~~~p~~~t~L~~i----LPCvd~~~a~~---~L~~sk~~i~~lv~~vN~~i~~i~n~n~~~  378 (555)
                      ++++..++++|.|+++++|+.+-+.+....||    +-|....+ |+   .+..+...+.+.-+++.......       
T Consensus       235 ~~la~aV~~SDFC~~Pd~~i~~~~~~~~~~di~~YYl~C~~~~~-nPFqq~l~~~~~al~~~q~~~~~L~~~a-------  306 (406)
T PF04906_consen  235 LELAAAVGLSDFCVDPDTYILNQTQNETSADILQYYLTCSQSVS-NPFQQRLTSSQRALSNMQSQVQGLLREA-------  306 (406)
T ss_pred             HHHHhccchhhhccCHHHHHHHhcccccchhHHHHhhcCCCCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence            99999999999999999999887666543344    56975432 33   34444333333322222222110       


Q ss_pred             CcccccccCCCCCCCCCCCCCCCcccccCCCCcccccchhcccccceeecCCCCCCCcccccCCCccchhHHHHHHHHHH
Q 008737          379 DYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVT  458 (555)
Q Consensus       379 ~~~~y~nqsgp~~p~lCnPf~~~~~~~~C~~gev~i~na~~v~~~~~C~~~~~~~~~~~~C~t~gr~tp~~y~q~~a~~n  458 (555)
                       .+                        .+|+.                                +    +.-.+++...|
T Consensus       307 -~~------------------------~fp~~--------------------------------~----~~l~~i~~~Ln  325 (406)
T PF04906_consen  307 -VP------------------------LFPTA--------------------------------Q----EPLLAIQEDLN  325 (406)
T ss_pred             -Hh------------------------hCCCc--------------------------------c----chHHHHHHHHH
Confidence             00                        00000                                0    11345666666


Q ss_pred             HHHHHHhhccccccCCCchhHHHHHhhcccCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008737          459 EIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL  521 (555)
Q Consensus       459 ~~~~L~~~~P~l~~L~~C~fVrdtF~~I~~~~C~~L~~~~~~v~~gl~~lS~~~~l~~i~Wi~  521 (555)
                      +....++   .++.+.||.-+++.+.+...+.|.+...++-.+|.  ..+..|.++.+++|+.
T Consensus       326 ~~e~~l~---~l~alldCr~lh~dY~~al~g~C~dg~eGl~~l~l--~sll~al~f~~~v~~~  383 (406)
T PF04906_consen  326 STERSLH---QLTALLDCRGLHKDYVDALRGLCYDGLEGLLYLLL--FSLLAALLFSILVCVV  383 (406)
T ss_pred             HHHHHHH---HHHhhcccccHHHHHHHHHHhhccchHhHHHHHHH--HHHHHHHHHHHHHHHh
Confidence            6665555   78999999999999999999999999999977765  3344444455555553

However, they are considered to be transmembrane proteins with five potential membrane-spanning regions. A number of potential functions have been suggested on the basis of homology to the yeast FTR1 and FTH1 iron transporter proteins and the mammalian neurotensin receptors 1 and 2 in that they have a similar hydrophobicity profiles although there is no detectable sequence homology to the tweety-related proteins. It has been proposed that the tweety-related proteins could be involved in transport of iron or other divalent cations or alternatively that they may be membrane-bound receptors [].

>KOG4433 consensus Tweety transmembrane/cell surface protein [General function prediction only]

Probab=99.84  E-value=1e-18  Score=185.29  Aligned_cols=358  Identities=17%  Similarity=0.168  Sum_probs=204.4

Q ss_pred             ccccccCcccCCcchhhhhhhhhhhhHHHHHHHHHHH--HHHH-HHHHHHhCCcccCCCCCCchhHHHHHHHHHHHHHHH
Q 008737           84 HFRRYQGGWDITNKHYWASVGFTGASAFILAVIWFIS--FGLV-LVAHHCCGWRINIKGKESASSQRICLILLIVFTCAA  160 (555)
Q Consensus        84 ~f~~Y~GG~nI~nkhYwaSV~fTgipg~~iA~~Wfi~--fGl~-l~~~~cc~~~~~~k~~~s~~~~~i~lilLllfTi~a  160 (555)
                      .|+.-+.-|++.++.|.+|.++.|    ++|++.+++  .+|+ -|+|.|||++...+++++  ..++..+.+++.|+++
T Consensus        24 ~~~~tns~F~pe~~~Y~QaL~lla----~l~aa~l~l~Ll~ll~yli~~cC~Rr~~~~~~~~--~~~c~s~~l~I~tl~c   97 (526)
T KOG4433|consen   24 KLHPTNSVFRPEDSEYQQALLLLA----ALAAACLGLSLLFLLFYLICRCCCRRETTGRKRR--RVRCLSWSLIIATLMC   97 (526)
T ss_pred             eEeeccccCCCCcHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHcCCCccCCCCC--CcceeeehHHHHHHHH
Confidence            467788999999999999999998    566665553  1222 233555554432222221  1223444455666666


Q ss_pred             HHHHhhhhcccccccccchhhhhHHhccchhHHHHHHHHHHHHhhhhhccccccc-cccchhhhHHHHH-------HHHH
Q 008737          161 AIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVF-LPSAVMDDIDKLN-------RDLS  232 (555)
Q Consensus       161 i~Gcivl~~Gn~kfh~~~~~t~~~vv~qa~~tv~tLrNVt~~L~~ak~~~V~~i~-lP~dv~~~Id~l~-------~~Ln  232 (555)
                      .+|.+++|+||+++|+++.+.. |-.+.+|.++.++++.+...+..-.....+.+ .|..+++...++.       .++.
T Consensus        98 ca~igvg~ygN~e~~~G~~q~~-~Sl~~an~tv~ti~~qv~~~~~~l~~~~~~~l~~~~~n~t~~~~l~~~l~~vq~~~~  176 (526)
T KOG4433|consen   98 CAAIGVGFYGNSETSDGLLQAT-YSLRHANHTVSTIDAQVSDTAEGLNNTAEQLLETLEENLTARPELLQALRRVQGNAE  176 (526)
T ss_pred             HHHHheeeecCccccchHHHHH-HhhhhhcchhhHHHHHHHHHHHHHHHHHHHHhhhHHhhhhhHHHHHHHHHHHHHHHH
Confidence            7777899999999999887543 34556666777777666544433221112211 1222322222222       2333


Q ss_pred             HHHHHhhHHhHHh-----hHHHHHHHHH---HHH-HHHHHHHHHHHHHHHHHHHHhh-chhhHHHHHHHHHHHHHHHHHH
Q 008737          233 TAANTLADKTSEN-----SAKIRKVFNA---VRS-ALITVAALMLLLSIIGLFLSIL-RHKHAIHIFILSGWLLVAITFI  302 (555)
Q Consensus       233 s~A~~L~~ki~~n-----~~~I~~~Ld~---V~~-~l~~vaavmL~La~lGlv~~~~-~~~~~~~~~~i~gwilv~~twi  302 (555)
                      .++.+++.--...     +.++.+..+-   .|. ++.++.++.++++++ +++|++ +.||+++.|.++|.+.++++|.
T Consensus       177 ~a~~~l~~~~~~~~~~~sl~~l~~~~~~yE~~RW~~~v~lL~l~LvvC~v-~vlglak~Skc~li~fsv~Gll~lvisWl  255 (526)
T KOG4433|consen  177 TAVGQLSGLPFWRMVAVSLEKLAEQVDFYESYRWLAYVLLLTLLLVVCLV-LVLGLAKRSKCLLIVFSVCGLLALVISWL  255 (526)
T ss_pred             HHHHhhhcCcccccCcccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcchhhhHHHHHHHHHHHHHHH
Confidence            3333322211111     1133333333   232 223333444444444 345555 5799999999999999999999


Q ss_pred             HHHHHHHHHhhhhhhhHhhHhhhhCCCCCCccccc----ccCCcccchhhHHHHhHHHHHHHHHHHHHHHHHHhccCCCC
Q 008737          303 LCGVFVILNNAISDTCMAMDEWVDHPHAETALSNI----LPCVDQRTTNKSLIQSKEVITDIVNVVNQFVYNIANANPSQ  378 (555)
Q Consensus       303 l~Gv~l~l~~~~~DtC~Am~e~~~~p~~~t~L~~i----LPCvd~~~a~~~L~~sk~~i~~lv~~vN~~i~~i~n~n~~~  378 (555)
                      +.|++++.+++++|+|+.+++|+.+-..+---.++    +-|. ..-+|....+.++.-.-+.+.=| .+..        
T Consensus       256 ~~gl~la~sVa~sDFC~~Pd~y~~~~~~~~l~t~~~~~yl~c~-~t~~NpF~qrL~~sq~al~~~~~-~va~--------  325 (526)
T KOG4433|consen  256 SLGLELASSVALSDFCVDPDDYVLNMVEEYLSTDILLYYLACS-PTHSNPFQQRLTESQRALNNMQS-QVAG--------  325 (526)
T ss_pred             HHhhhHHHHhhhhhhccChHHHHHHhhhcccchhHHhhhcccC-CCCCCchhHHHHHHHHHHHHHHH-HHHH--------
Confidence            99999999999999999999999776543211122    1232 22333333333332221111111 1110        


Q ss_pred             CcccccccCCCCCCCCCCCCCCCcccccCCCCcccccchhcccccceeecCCCCCCCcccccCCCccchhHHHHHHHHHH
Q 008737          379 DYIYYYNQTGPVMPPLCYPYDSQLQDRQCGSYEVSIANASKVWQNYTCELSTSGSSAFGRCNSVGRVTPYFYKELVSAVT  458 (555)
Q Consensus       379 ~~~~y~nqsgp~~p~lCnPf~~~~~~~~C~~gev~i~na~~v~~~~~C~~~~~~~~~~~~C~t~gr~tp~~y~q~~a~~n  458 (555)
                                                                ..+..=.            ..+  -+.+....|....|
T Consensus       326 ------------------------------------------l~r~~v~------------~f~--~~q~~L~Av~~dLn  349 (526)
T KOG4433|consen  326 ------------------------------------------LLRMAVP------------LFP--AAQDPLLAVQEDLN  349 (526)
T ss_pred             ------------------------------------------HHHhhhh------------ccc--cccCcHHHHHHHHH
Confidence                                                      0111000            000  01112456777777


Q ss_pred             HHHHHHhhccccccCCCchhHHHHHhhcccCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008737          459 EIYALQLYTPRLLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWI  520 (555)
Q Consensus       459 ~~~~L~~~~P~l~~L~~C~fVrdtF~~I~~~~C~~L~~~~~~v~~gl~~lS~~~~l~~i~Wi  520 (555)
                      .+..+++   .|..+.||--+.+-|.+-..+-|-+-..++-.+  .+..+-.|++|.+++|.
T Consensus       350 ~te~nl~---qLtAlvdCr~lH~dy~~AlrGlC~~gl~GL~~l--ml~s~L~a~~lsilv~~  406 (526)
T KOG4433|consen  350 STERNLH---QLTALVDCRSLHKDYVAALRGLCYDGLEGLLYL--MLFSFLTALALSILVCS  406 (526)
T ss_pred             HHHHHHH---HHHHhhhhhHHHHHHHHHHHHhhhhhHHHHHHH--HHHHHHHHHHHHHHHhc
Confidence            7777777   788899999999999999999998877765443  55555566666666633

>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology

Probab=99.31  E-value=4.7e-10  Score=130.40  Aligned_cols=147  Identities=14%  Similarity=0.240  Sum_probs=108.5

Q ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHHHH---HHHHhCCcccC---C----CCCCchh-HHHHHHHHHHHHHHHHHHHhhhh
Q 008737          100 WASVGFTGASAFILAVIWFISFGLVLV---AHHCCGWRINI---K----GKESASS-QRICLILLIVFTCAAAIGCILLS  168 (555)
Q Consensus       100 waSV~fTgipg~~iA~~Wfi~fGl~l~---~~~cc~~~~~~---k----~~~s~~~-~~i~lilLllfTi~ai~Gcivl~  168 (555)
                      ++-+.+-.  ||++-++..+.|.+++-   +|+|||+||.+   |    .+++..| |.++.++|+++++++++|.+++|
T Consensus        84 ~~~l~~~~--g~~v~~~i~ll~~il~P~vg~~fCcCRCc~~CGg~~~~~~~~~~~c~R~~l~~~L~~~~~~il~g~i~aF  161 (806)
T PF05478_consen   84 LELLAYEW--GFLVCAVIGLLFIILMPLVGLCFCCCRCCGNCGGRMHQRDKKNDACRRGCLGILLLLLTLIILFGVICAF  161 (806)
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccccCCCcCCccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            44444421  34544444443443332   26666655543   1    1122245 35777788899999999999999


Q ss_pred             cccccccccchhhhhHHhccchhHHHHHHHHHHHHhhhhhccccccccc-cchhhhHHHHHHHHHHHHHHhhHHhHHhhH
Q 008737          169 VGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQVFLP-SAVMDDIDKLNRDLSTAANTLADKTSENSA  247 (555)
Q Consensus       169 ~Gn~kfh~~~~~t~~~vv~qa~~tv~tLrNVt~~L~~ak~~~V~~i~lP-~dv~~~Id~l~~~Lns~A~~L~~ki~~n~~  247 (555)
                      .+|++++++++++.+       .+.++++|+..+++++++ ++++++.. ++.  ..+++..+|++++..++.++++.++
T Consensus       162 ~~n~~l~~~v~~~~~-------~~~~~~~Dl~~~l~~~~~-qi~~l~~~ny~~--~~~~v~~~L~~~~~~lg~~i~~~l~  231 (806)
T PF05478_consen  162 VANQQLSTGVDDTPN-------TVNSTLDDLRTFLNDTPQ-QIDHLLVQNYSE--LKDHVSSDLDNIGSLLGGDIQDQLG  231 (806)
T ss_pred             HHHHHHHHHhhhHHH-------HHHHHHHHHHHHHHhhHH-HHHHHHHHHHHH--HHHHHHHHHHhccchhhHHHHHHHh
Confidence            999999999998877       788999999999999997 88887775 544  8889999999999999999999988


Q ss_pred             -HHHHHHHHHHH
Q 008737          248 -KIRKVFNAVRS  258 (555)
Q Consensus       248 -~I~~~Ld~V~~  258 (555)
                       ++.++|+.+.-
T Consensus       232 ~~~~~~L~~i~~  243 (806)
T PF05478_consen  232 SNVYPALDSILD  243 (806)
T ss_pred             hhhHHHHHHHHH
Confidence             78888777654

Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane

>KOG4331 consensus Polytopic membrane protein Prominin [General function prediction only]

Probab=98.52  E-value=2.8e-07  Score=104.54  Aligned_cols=152  Identities=13%  Similarity=0.152  Sum_probs=96.8

Q ss_pred             CcccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHH---HHHHHhCCcccCCCCC--Cc-----hh-HHHHHHHHHHHHH
Q 008737           90 GGWDITNKHYWASVGFTGASAFILAVIWFISFGLVL---VAHHCCGWRINIKGKE--SA-----SS-QRICLILLIVFTC  158 (555)
Q Consensus        90 GG~nI~nkhYwaSV~fTgipg~~iA~~Wfi~fGl~l---~~~~cc~~~~~~k~~~--s~-----~~-~~i~lilLllfTi  158 (555)
                      -|=+. +|.||.=|.|-+  |+++-.+-++.+-++.   -+|+|||+||+++.++  +.     .+ |.++-+.|++.++
T Consensus        88 ~~~~~-ek~~~~lv~~~~--g~lv~sV~~v~~iil~p~~~~~yccc~C~~rc~~r~~~~~~~~~a~kR~~~~l~Llvl~i  164 (865)
T KOG4331|consen   88 LGCRY-EKGDILLVIYEA--GMLVCSVILVLYIILKPSEGLCYCCCRCCRRCGGRIKSALKQDDACKRPCCELELLVLAI  164 (865)
T ss_pred             cCCcc-cccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhHHhheeeeHhhhcCCCCchhccCcHhhhhHHHHHHHHHHH
Confidence            34344 466687777743  3333333222211111   1267777666553322  11     12 3477888899999


Q ss_pred             HHHHHHhhhhcccccccccchhhhhHHhccchhHHHHHHHHHHHHhhhhhccccc-cccccchhhhHHHHHHHHHHHHHH
Q 008737          159 AAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTLRNVTEYLSLAKTINVAQ-VFLPSAVMDDIDKLNRDLSTAANT  237 (555)
Q Consensus       159 ~ai~Gcivl~~Gn~kfh~~~~~t~~~vv~qa~~tv~tLrNVt~~L~~ak~~~V~~-i~lP~dv~~~Id~l~~~Lns~A~~  237 (555)
                      ..++|.+.+|..|+..|.+.+++.+       ++..+..+..++++.+|+ ++.. +...+..  .-+++..+||.++..
T Consensus       165 ~~ligv~~~fvtnk~v~~~i~~s~~-------~m~~~~~dl~t~lrdv~~-~l~~lli~dy~~--~e~qv~~qLn~i~~~  234 (865)
T KOG4331|consen  165 ELLIGVFRAFVTNKPVMLRIKNSLE-------DMRRLATDLRTYLRDVPR-DLMVLLIADYTH--SECQVFYQLNEIGML  234 (865)
T ss_pred             HHHHHHHHHHHHhhHHHHhhhccHH-------HHHHHHHHHHHHHhccHH-HHHHHHHHHhcc--chhHHHHHhhcccch
Confidence            9999999999999999999999988       888888899999998886 5652 2333333  456666777777666


Q ss_pred             hhHHhHHhhH-HHHHHHH
Q 008737          238 LADKTSENSA-KIRKVFN  254 (555)
Q Consensus       238 L~~ki~~n~~-~I~~~Ld  254 (555)
                      ++..+++.++ .+-++++
T Consensus       235 i~~~l~~~s~s~vi~~l~  252 (865)
T KOG4331|consen  235 IGGCLHDDSESNVIPVLD  252 (865)
T ss_pred             hcchhhhccccchHHHHH
Confidence            6666655554 4444444

>KOG4433 consensus Tweety transmembrane/cell surface protein [General function prediction only]

Probab=97.53  E-value=0.0025  Score=69.43  Aligned_cols=121  Identities=18%  Similarity=0.173  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHHHHH--HHHhCCcccCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhhcccccccccchhhhhHHhccc
Q 008737          112 ILAVIWFISFGLVLVA--HHCCGWRINIKGKESASSQRICLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQS  189 (555)
Q Consensus       112 ~iA~~Wfi~fGl~l~~--~~cc~~~~~~k~~~s~~~~~i~lilLllfTi~ai~Gcivl~~Gn~kfh~~~~~t~~~vv~qa  189 (555)
                      ++|.+=-.+.|+.|+.  .+..|.||+||+.. ++.++-.--+--...|+.+++|.-+..|  -+-++            
T Consensus        45 lla~l~aa~l~l~Ll~ll~yli~~cC~Rr~~~-~~~~~~~~c~s~~l~I~tl~cca~igvg--~ygN~------------  109 (526)
T KOG4433|consen   45 LLAALAAACLGLSLLFLLFYLICRCCCRRETT-GRKRRRVRCLSWSLIIATLMCCAAIGVG--FYGNS------------  109 (526)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc-CCCCCCcceeeehHHHHHHHHHHHHhee--eecCc------------
Confidence            4444444434444443  56667777766555 5677777777777777777777666543  22221            


Q ss_pred             hhHHHHHHHHHHHHhhhhhccccccccccchhhhHHHHHHHHHHHHHHhhHHhHHhhHHHHHHHHH
Q 008737          190 DYTVKTLRNVTEYLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAANTLADKTSENSAKIRKVFNA  255 (555)
Q Consensus       190 ~~tv~tLrNVt~~L~~ak~~~V~~i~lP~dv~~~Id~l~~~Lns~A~~L~~ki~~n~~~I~~~Ld~  255 (555)
                       ++.+-+...+..+..++.     .+.  -.+.++.+.+++|++.+.+.-+|-++|..-..+.+.+
T Consensus       110 -e~~~G~~q~~~Sl~~an~-----tv~--ti~~qv~~~~~~l~~~~~~~l~~~~~n~t~~~~l~~~  167 (526)
T KOG4433|consen  110 -ETSDGLLQATYSLRHANH-----TVS--TIDAQVSDTAEGLNNTAEQLLETLEENLTARPELLQA  167 (526)
T ss_pred             -cccchHHHHHHhhhhhcc-----hhh--HHHHHHHHHHHHHHHHHHHHhhhHHhhhhhHHHHHHH
Confidence             233333333333333322     111  2233566666777777777777777776643343333

>cd07912 Tweety_N N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels

Probab=97.41  E-value=0.004  Score=67.92  Aligned_cols=65  Identities=14%  Similarity=0.135  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHHHHH--HHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHhhHhhhhCC
Q 008737          261 ITVAALMLLLSIIGL--FLSILRHKHAIHIFILSGWLLVAITFILCGVFVILNNAISDTCMAMDEWVDHP  328 (555)
Q Consensus       261 ~~vaavmL~La~lGl--v~~~~~~~~~~~~~~i~gwilv~~twil~Gv~l~l~~~~~DtC~Am~e~~~~p  328 (555)
                      +-..+.|++|.+.-+  +++++|.-+--....++-.++..++.+++-+.+.+|.++   +++..||=-+|
T Consensus       207 ~Rw~~~l~lL~~~lviC~~~l~gl~r~Sr~~li~~s~~g~l~l~~~W~~~~~~l~~---~v~~sDfC~~p  273 (418)
T cd07912         207 YRWLAYLGLLSLLLVICLVLLVGLARHSRCLLIVFSVCGLFALIISWLSLGLYLAS---AVALSDFCVDP  273 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhhhhhcCH
Confidence            444455655555322  444455555555555554555566666666666666554   35455544444

The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins.

>PF04906 Tweety: Tweety; InterPro: IPR006990 None of the members of the tweety (tty) family have been functionally characterised

Probab=97.38  E-value=0.0035  Score=68.23  Aligned_cols=175  Identities=15%  Similarity=0.198  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHhCCccc-CCCCCCchhHHHHHHHHHHHHHHHHHHHhhh----hcccccccccchhhh---hHHhccc
Q 008737          118 FISFGLVLVAHHCCGWRIN-IKGKESASSQRICLILLIVFTCAAAIGCILL----SVGQDEFHGEAMHTL---KYVVNQS  189 (555)
Q Consensus       118 fi~fGl~l~~~~cc~~~~~-~k~~~s~~~~~i~lilLllfTi~ai~Gcivl----~~Gn~kfh~~~~~t~---~~vv~qa  189 (555)
                      |+ |-++.++|+|||++.+ .+.+....|..+.+++..++++++++.+..+    -.|=.++..+..++-   .-|-++.
T Consensus        34 Ll-~ll~yl~~~CC~r~~~~~~~~~~~~c~~~~~~ia~lvc~aaigvG~yGN~e~~~gv~~~~~s~~~~n~t~~~i~~~v  112 (406)
T PF04906_consen   34 LL-FLLIYLICRCCCRRPREEKSSRRCCCLTWSLVIATLVCCAAIGVGFYGNSETNDGVYQLIYSLRNANHTLSGIDNLV  112 (406)
T ss_pred             HH-HHHHHHHHHhhCCCCCccccccCCcchHHHHHHHHHHHHHHHHcccccchhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence            44 4445556777776643 4665567788777888888888988877765    344344444443333   2333455


Q ss_pred             hhHHHHHH-HHHH---HHhhhhhccccccccccchhhhHHHHHHHHHHHHH------HhhHHhHHhhHHHHHHHHHHHHH
Q 008737          190 DYTVKTLR-NVTE---YLSLAKTINVAQVFLPSAVMDDIDKLNRDLSTAAN------TLADKTSENSAKIRKVFNAVRSA  259 (555)
Q Consensus       190 ~~tv~tLr-NVt~---~L~~ak~~~V~~i~lP~dv~~~Id~l~~~Lns~A~------~L~~ki~~n~~~I~~~Ld~V~~~  259 (555)
                      +++.+.+. .+..   .|++.-..+.+..-.-...|+..+.+..++++...      ++ +.+.++.+.++...-...+.
T Consensus       113 ~~~~~~l~~~v~~~l~~Le~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~~~~~~~l-~~~~~~~~~~E~yRw~~~~~  191 (406)
T PF04906_consen  113 SDTTEALNSTVEQHLTRLEEIFAKRTDLLQALQFLQQQAENVVQQLDELPFWRNVSLSL-EQLAEQVSFYEYYRWLAYLG  191 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHhcCcccccCCCCH-HHHHHHHHHHHHHHHHHHHH
Confidence            55554443 2222   23322111111111111334455555544443321      22 34445556666666667777


Q ss_pred             HHHHHHHHHHHHHHHHH---------HHhhchhhHHHHHHHHHHHHHHH
Q 008737          260 LITVAALMLLLSIIGLF---------LSILRHKHAIHIFILSGWLLVAI  299 (555)
Q Consensus       260 l~~vaavmL~La~lGlv---------~~~~~~~~~~~~~~i~gwilv~~  299 (555)
                      +.++..+..++.++|+.         ++++|+     +.+++.|++..+
T Consensus       192 lL~l~l~icl~~l~glar~Sk~~li~~~v~gl-----l~lvisW~~~g~  235 (406)
T PF04906_consen  192 LLILDLVICLLGLLGLARQSKCLLIVFSVLGL-----LALVISWISLGL  235 (406)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcceEEEeeeccH-----HHHHHHHHHHHH
Confidence            77777777777777763         334442     334466887655

However, they are considered to be transmembrane proteins with five potential membrane-spanning regions. A number of potential functions have been suggested on the basis of homology to the yeast FTR1 and FTH1 iron transporter proteins and the mammalian neurotensin receptors 1 and 2 in that they have a similar hydrophobicity profiles although there is no detectable sequence homology to the tweety-related proteins. It has been proposed that the tweety-related proteins could be involved in transport of iron or other divalent cations or alternatively that they may be membrane-bound receptors [].

>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology

Probab=92.82  E-value=1.8  Score=51.29  Aligned_cols=52  Identities=10%  Similarity=0.216  Sum_probs=45.1

Q ss_pred             cccCCCchhHHHHHhhcccCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008737          470 LLSLQDCNFVRDTFQNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWIL  521 (555)
Q Consensus       470 l~~L~~C~fVrdtF~~I~~~~C~~L~~~~~~v~~gl~~lS~~~~l~~i~Wi~  521 (555)
                      -++...|.=+.+++...+.--|.-+...++-.|.|+..-++-++.++|+-+-
T Consensus       739 ~~~vg~C~Pl~~~~d~~~~~~C~~ivdp~N~fWf~l~~c~~~liP~ii~avk  790 (806)
T PF05478_consen  739 TNDVGRCQPLANIYDSAVVILCSRIVDPINGFWFGLGWCTLFLIPSIIFAVK  790 (806)
T ss_pred             HccCcCCccHHHHHHhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3577899999999999999999999999999999999988888887777444

Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	555
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 1e-05
 Identities = 59/460 (12%), Positives = 137/460 (29%), Gaps = 133/460 (28%)

Query: 99  YWASVGFTGASAFILAVIWFISFGLVLVAHHCCGWRINIKGKESASSQRI---------- 148
           +W ++    +   +L ++  + + +            NIK +  +    +          
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244

Query: 149 -CLILLIVFTCAAAIGCILLSVGQDEFHGEAMHTLKYVVNQSDYTVKTL-----RNVTEY 202
            CL+             +LL+V Q+     A           + + K L     + VT++
Sbjct: 245 NCLL-------------VLLNV-QNAKAWNAF----------NLSCKILLTTRFKQVTDF 280

Query: 203 LSLAKTINVAQVFLPSAVM-DDIDKLNRDLSTAANTLADKTSENSAKIRKVFNAVRSALI 261
           LS A T +++       +  D++  L   L    +                 N  R ++I
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSL---LLKYLDCRPQDLPREVLTT----NPRRLSII 333

Query: 262 TVAALML----------------LLSIIGLFLSIL------RHKHAIHIFILSGWLLVAI 299
             A  +                 L +II   L++L      +    + +F  S      I
Sbjct: 334 --AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS----AHI 387

Query: 300 TFILCGVFVIL-NNAISDTCMA-MDEWVD------HPHAET------ALSNILPCVDQRT 345
                 +  ++  + I    M  +++          P   T       L   +   ++  
Sbjct: 388 PT---ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444

Query: 346 TNKSLIQSKEVITDIVNVVNQFVYNIANANPSQDYIYYYNQTGPVMPPLCYPYDSQLQDR 405
            ++S++          N+   F  +         Y Y +         + +     L  +
Sbjct: 445 LHRSIVDH-------YNIPKTFDSDDLIPPYLDQYFYSH---------IGH----HL--K 482

Query: 406 QCGSYEVSIANASKVWQNYT------CELSTSGSSAFGRCNSVGRVTPY---------FY 450
                E  +     V+ ++          ST+ +++    N++ ++  Y          Y
Sbjct: 483 NIEHPE-RMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY 541

Query: 451 KELVSAVTEIYALQLYTPRLLSLQDCNFVRDTFQNITSNY 490
           + LV+A+ +   L      L+  +  + +R          
Sbjct: 542 ERLVNAILDF--LPKIEENLICSKYTDLLRIALMAEDEAI 579

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 4e-04
 Identities = 46/334 (13%), Positives = 93/334 (27%), Gaps = 117/334 (35%)

Query: 309 ILNNAISDTCMAMDEWVDHPHAETALSNILPCVDQRTTNKSLIQSKEVITDIVNVVNQFV 368
           +  + +S     +D  +    A +    +   +        L + +E++   V  V +  
Sbjct: 41  MPKSILSKE--EIDHIIMSKDAVSGTLRLFWTL--------LSKQEEMVQKFVEEVLRIN 90

Query: 369 YN-IANA------NPSQD---YIYYYNQ---TGPVMPPLCY------PYDS------QLQ 403
           Y  + +        PS     YI   ++      V     Y      PY        +L+
Sbjct: 91  YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK--YNVSRLQPYLKLRQALLELR 148

Query: 404 DRQ---------CG----------SYEVSIANASKV-WQNYTCELSTSGSSAFGRCNSVG 443
             +          G          SY+V      K+ W N               CNS  
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN------------LKNCNSPE 196

Query: 444 RV------------------------TPYFYKELVSAVTEIYALQLYTPRLLSLQDCNFV 479
            V                               + + +  +   + Y   LL L +   V
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN---V 253

Query: 480 RD-----TF------------QNITSNYCPPLEHYLKIVNAGLGMISFGVLLCLLLWILY 522
           ++      F            + +T         ++ + +  + +    V   LL ++  
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL-- 311

Query: 523 ANRPQ--REEVFVNLPLPIKCISRSQKNSVNSSN 554
             RPQ    EV    P  +  I+ S ++ + + +
Sbjct: 312 DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD 345

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00