Citrus Sinensis ID: 008760


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550----
MATKTQTESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCIFLVLLTYRQKE
cccccccccccccccccccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccEEEccccEEEcccccccccccHHHHEEccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccEEEccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHcccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHcccccEEEEEEEccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccHHHHHHHHHHHHHHHcEEEEEEEcccccHHHHHHHHHHHHHHHHHHHEEEEEcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
ccccccccccccccccccccccccHHHEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEHHHHHHHHcHHHHHHHHHccccEEEcccEEEEEccccccHHHEEEEEEEHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccEEEEEEccccccccEEEEEEcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHEEccccEccccccccccccccccccEEcEEEEEcccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHEEEEEEcccccccEHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
matktqtesnenpngdsteercpieevalivpetddptmpvmTFRAWFLGLTSCTLLIFLNtfftfrtqpLTISAILMQIAVLPIGKFmarilpnkefqvlgwrfslnpgpfnikeHVIITIFAncgvsfgggdaysIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLvdpvemwwpsnlAQVSLFRALHEkeskskgltRMQFFLIVLAASFAyyslpgylfpiLTFFSwvcwawphsitaqqigsgyhglgigaftldwagisayhgsplvtpwtsilnvGIGFVMFIYIIVPLcywkfdtfdarkfpifsnqlftssghkydttkiltpqydlnipaynsygklylsplfalsigsgfarFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIgviqattnqqpgydIIAQFMigyvlpgkpiANLLFKIYGRISTIHALSFLsdlklghymkipprcmYTAQVLVAQKSCIFLVLLTYRQKE
matktqtesnenpngdsteercpIEEVALivpetddptmPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCIFLVLLTYRQKE
MATKTQTESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCtlliflntfftfrtQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVlllgsiglsllMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCIFLVLLTYRQKE
***********************IEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEK****KGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCIFLVLLTY****
********************RCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRAL*********LTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCIFLVLLTYRQKE
*******************ERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCIFLVLLTYRQKE
********************RCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCIFLVLLTYRQKE
oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
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MATKTQTESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCIFLVLLTYRQKE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query554 2.2.26 [Sep-21-2011]
O23482 737 Oligopeptide transporter yes no 0.962 0.723 0.828 0.0
Q9FME8 729 Oligopeptide transporter no no 0.933 0.709 0.554 1e-176
O82485 766 Oligopeptide transporter no no 0.929 0.672 0.563 1e-174
O04514 734 Oligopeptide transporter no no 0.935 0.705 0.531 1e-172
Q9T095 736 Oligopeptide transporter no no 0.947 0.713 0.529 1e-164
Q9SUA4 753 Oligopeptide transporter no no 0.918 0.675 0.532 1e-158
Q9FJD2 741 Oligopeptide transporter no no 0.933 0.697 0.524 1e-155
Q9FJD1 733 Oligopeptide transporter no no 0.944 0.713 0.496 1e-153
Q9FG72 755 Oligopeptide transporter no no 0.962 0.705 0.5 1e-152
P40900 785 Sexual differentiation pr yes no 0.951 0.671 0.363 1e-102
>sp|O23482|OPT3_ARATH Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 Back     alignment and function desciption
 Score =  936 bits (2420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/535 (82%), Positives = 497/535 (92%), Gaps = 2/535 (0%)

Query: 2   ATKTQTESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLN 61
           A K   ++N + + D   ERCP+EEVAL+VPETDDP++PVMTFRAWFLGLTSC LLIFLN
Sbjct: 3   AEKATDKTNVHLSSD--HERCPVEEVALVVPETDDPSLPVMTFRAWFLGLTSCVLLIFLN 60

Query: 62  TFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIIT 121
           TFFT+RTQPLTISAILMQIAVLPIGKFMAR LP     +LGW FSLNPGPFNIKEHVIIT
Sbjct: 61  TFFTYRTQPLTISAILMQIAVLPIGKFMARTLPTTSHNLLGWSFSLNPGPFNIKEHVIIT 120

Query: 122 IFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVD 181
           IFANCGV++GGGDAYSIGAITVMKAYYKQSL+F+CGL IVLTTQILGYGWAG+LRRYLVD
Sbjct: 121 IFANCGVAYGGGDAYSIGAITVMKAYYKQSLSFICGLFIVLTTQILGYGWAGILRRYLVD 180

Query: 182 PVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFS 241
           PV+MWWPSNLAQVSLFRALHEKE+KSKGLTRM+FFL+ L ASF YY+LPGYLFPILTFFS
Sbjct: 181 PVDMWWPSNLAQVSLFRALHEKENKSKGLTRMKFFLVALGASFIYYALPGYLFPILTFFS 240

Query: 242 WVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFI 301
           WVCWAWP+SITAQQ+GSGYHGLG+GAFTLDWAGISAYHGSPLV PW+SILNVG+GF+MFI
Sbjct: 241 WVCWAWPNSITAQQVGSGYHGLGVGAFTLDWAGISAYHGSPLVAPWSSILNVGVGFIMFI 300

Query: 302 YIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLS 361
           YIIVP+CYWKF+TFDARKFPIFSNQLFT+SG KYDTTKILTPQ+DL+I AYN+YGKLYLS
Sbjct: 301 YIIVPVCYWKFNTFDARKFPIFSNQLFTTSGQKYDTTKILTPQFDLDIGAYNNYGKLYLS 360

Query: 362 PLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWF 421
           PLFALSIGSGFARFT+TLTHVALF+G  I +Q+ SA+   KLD+H +LM+SYK+VP+WWF
Sbjct: 361 PLFALSIGSGFARFTATLTHVALFNGRDIWKQTWSAVNTTKLDIHGKLMQSYKKVPEWWF 420

Query: 422 YVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIA 481
           Y+LL GS+ +SLLMSFVWK+ VQL WWGMLFAFALA+IVTLPIGVIQATTNQQPGYDII 
Sbjct: 421 YILLAGSVAMSLLMSFVWKESVQLPWWGMLFAFALAFIVTLPIGVIQATTNQQPGYDIIG 480

Query: 482 QFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVL 536
           QF+IGY+LPGKPIANL+FKIYGRIST+HALSFL+DLKLGHYMKIPPRCMYTAQ++
Sbjct: 481 QFIIGYILPGKPIANLIFKIYGRISTVHALSFLADLKLGHYMKIPPRCMYTAQLV 535




May be involved in the translocation of tetra- and pentapeptides across the cellular membrane in an energy-dependent manner. Acts also as a metal transporter that could be a component of the copper transport machinery. Essential for early embryo development.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FME8|OPT4_ARATH Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=2 SV=1 Back     alignment and function description
>sp|O82485|OPT7_ARATH Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 Back     alignment and function description
>sp|O04514|OPT2_ARATH Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 Back     alignment and function description
>sp|Q9T095|OPT6_ARATH Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 Back     alignment and function description
>sp|Q9SUA4|OPT5_ARATH Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJD2|OPT9_ARATH Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJD1|OPT8_ARATH Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG72|OPT1_ARATH Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 Back     alignment and function description
>sp|P40900|ISP4_SCHPO Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query554
297735875 752 unnamed protein product [Vitis vinifera] 0.960 0.707 0.847 0.0
359496107 748 PREDICTED: oligopeptide transporter 3-li 0.960 0.711 0.847 0.0
356522077 742 PREDICTED: oligopeptide transporter 3-li 0.965 0.721 0.839 0.0
224089577 744 oligopeptide transporter OPT family [Pop 0.965 0.719 0.821 0.0
297800510 737 hypothetical protein ARALYDRAFT_355122 [ 0.958 0.720 0.836 0.0
356562022 741 PREDICTED: oligopeptide transporter 3-li 0.967 0.723 0.830 0.0
240255930 737 oligopeptide transporter [Arabidopsis th 0.962 0.723 0.828 0.0
332278199 737 RecName: Full=Oligopeptide transporter 3 0.962 0.723 0.828 0.0
15451020 737 Unknown protein [Arabidopsis thaliana] 0.962 0.723 0.826 0.0
320097186 736 oligopeptide transporter 3 [Noccaea caer 0.958 0.721 0.834 0.0
>gi|297735875|emb|CBI18634.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  953 bits (2464), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/536 (84%), Positives = 496/536 (92%), Gaps = 4/536 (0%)

Query: 1   MATKTQTESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFL 60
           + T    E+ + P G    ER P+EEVAL+VPETDD T+PVMTFRAWFLG+ SC+LLIFL
Sbjct: 14  IPTTNGKEATQAPEG----ERTPVEEVALVVPETDDQTLPVMTFRAWFLGIISCSLLIFL 69

Query: 61  NTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVII 120
           NTFF++RTQPLTISAILMQIAVLP+GKFMA  LP +EF+V GW FSLNPGPFN+KEHVII
Sbjct: 70  NTFFSYRTQPLTISAILMQIAVLPVGKFMASTLPRREFKVFGWGFSLNPGPFNMKEHVII 129

Query: 121 TIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLV 180
           T+FANCGVS+GGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLR+YLV
Sbjct: 130 TVFANCGVSYGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRKYLV 189

Query: 181 DPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFF 240
           +P EMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFL+ L ASF YY+LPGYLFPILTFF
Sbjct: 190 EPAEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLLFLMASFFYYALPGYLFPILTFF 249

Query: 241 SWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMF 300
           SWVCW WPHSITAQQIGSGYHGLG+GAFTLDWAGISAYHGSPLVTPW SILNVG GF+MF
Sbjct: 250 SWVCWVWPHSITAQQIGSGYHGLGVGAFTLDWAGISAYHGSPLVTPWFSILNVGAGFIMF 309

Query: 301 IYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYL 360
           IYIIVP+CYWKF+TFDARKFPIFSNQLFTS+GHKYDT KILTPQYDLNI AY+ YGKLYL
Sbjct: 310 IYIIVPVCYWKFNTFDARKFPIFSNQLFTSTGHKYDTNKILTPQYDLNIAAYDGYGKLYL 369

Query: 361 SPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWW 420
           SPLFALSIGSGFARFT+TLTHVALFHG  IL QS+SA+ N K+DVHARLMK+YKQVP+WW
Sbjct: 370 SPLFALSIGSGFARFTATLTHVALFHGRDILRQSKSAIHNAKMDVHARLMKNYKQVPEWW 429

Query: 421 FYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDII 480
           F +LL+GSI LS++M FVWK++VQL WWGMLFAF LAWIVTLPIGVIQATTNQQPGYDII
Sbjct: 430 FLILLIGSIALSIIMCFVWKEDVQLPWWGMLFAFGLAWIVTLPIGVIQATTNQQPGYDII 489

Query: 481 AQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVL 536
           AQF+IGYVLPGKPIANLLFKIYGRIST+HALSFLSDLKLGHYMKIPPRCMYTAQ++
Sbjct: 490 AQFIIGYVLPGKPIANLLFKIYGRISTVHALSFLSDLKLGHYMKIPPRCMYTAQLV 545




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496107|ref|XP_002273768.2| PREDICTED: oligopeptide transporter 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356522077|ref|XP_003529676.1| PREDICTED: oligopeptide transporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|224089577|ref|XP_002308764.1| oligopeptide transporter OPT family [Populus trichocarpa] gi|222854740|gb|EEE92287.1| oligopeptide transporter OPT family [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297800510|ref|XP_002868139.1| hypothetical protein ARALYDRAFT_355122 [Arabidopsis lyrata subsp. lyrata] gi|297313975|gb|EFH44398.1| hypothetical protein ARALYDRAFT_355122 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356562022|ref|XP_003549274.1| PREDICTED: oligopeptide transporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|240255930|ref|NP_567493.5| oligopeptide transporter [Arabidopsis thaliana] gi|332658338|gb|AEE83738.1| oligopeptide transporter [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|332278199|sp|O23482.3|OPT3_ARATH RecName: Full=Oligopeptide transporter 3; Short=AtOPT3 gi|25083021|gb|AAN72034.1| isp4 like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15451020|gb|AAK96781.1| Unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|320097186|gb|ADW09325.1| oligopeptide transporter 3 [Noccaea caerulescens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query554
TAIR|locus:2132736 766 OPT7 "AT4G10770" [Arabidopsis 0.956 0.691 0.539 2.7e-162
TAIR|locus:2173408 729 OPT4 "AT5G64410" [Arabidopsis 0.933 0.709 0.531 1.4e-158
TAIR|locus:2024372 734 OPT2 "oligopeptide transporter 0.938 0.708 0.499 3.6e-153
TAIR|locus:2137727 736 OPT6 "oligopeptide transporter 0.935 0.703 0.516 6.4e-147
TAIR|locus:2168616 741 OPT9 "oligopeptide transporter 0.936 0.700 0.507 4.5e-146
TAIR|locus:2133882 753 OPT5 "oligopeptide transporter 0.933 0.686 0.512 1.2e-145
TAIR|locus:2178398 755 OPT1 "AT5G55930" [Arabidopsis 0.920 0.675 0.507 7.8e-142
TAIR|locus:2168626 733 OPT8 "oligopeptide transporter 0.916 0.693 0.489 2.1e-139
ASPGD|ASPL0000066065 794 AN7597 [Emericella nidulans (t 0.927 0.647 0.367 9.7e-96
CGD|CAL0003352 783 OPT1 [Candida albicans (taxid: 0.909 0.643 0.373 8.7e-95
TAIR|locus:2132736 OPT7 "AT4G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1580 (561.2 bits), Expect = 2.7e-162, P = 2.7e-162
 Identities = 290/538 (53%), Positives = 375/538 (69%)

Query:    14 NGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCXXXXXXXXXXXXXXQPLTI 73
             N +  EE  PI +VAL VP TDDP++PV+TFR W LG  SC              +PLTI
Sbjct:    47 NEEEEEENSPIRQVALTVPTTDDPSLPVLTFRMWVLGTLSCILLSFLNQFFWYRTEPLTI 106

Query:    74 SAILMQIAVLPIGKFMA-RILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGG 132
             SAI  QIAV+P+G+ MA +I     FQ   W+F+LNPGPFN+KEHV+ITIFAN G     
Sbjct:   107 SAISAQIAVVPLGRLMAAKITDRVFFQGSKWQFTLNPGPFNVKEHVLITIFANAGA---- 162

Query:   133 GDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLA 192
             G  Y+I  +TV+KA+Y +++ F    ++++TTQ+LG+GWAG+ R+YLV+P  MWWP+NL 
Sbjct:   163 GSVYAIHVVTVVKAFYMKNITFFVSFIVIVTTQVLGFGWAGIFRKYLVEPAAMWWPANLV 222

Query:   193 QVSLFRALHEKESKSKG-LTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSI 251
             QVSLFRALHEKE ++KG LTR QFF+I    SFAYY  PGYLF I+T  SWVCW +P S+
Sbjct:   223 QVSLFRALHEKEERTKGGLTRTQFFVIAFVCSFAYYVFPGYLFQIMTSLSWVCWFFPSSV 282

Query:   252 TAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWK 311
              AQQIGSG HGLG+GA  LDW+ IS+Y GSPL +PW +  NVG+GFV+ IY++VP+CYW 
Sbjct:   283 MAQQIGSGLHGLGVGAIGLDWSTISSYLGSPLASPWFATANVGVGFVLVIYVLVPICYW- 341

Query:   312 FDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSG 371
              D + A+ FPIFS+ LF+S G KY+ T I+   + L++PAY   G LYL   FA+S G G
Sbjct:   342 LDVYKAKTFPIFSSSLFSSQGSKYNITSIIDSNFHLDLPAYERQGPLYLCTFFAISYGVG 401

Query:   372 FARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVXXXXXXXX 431
             FA  ++T+ HVALFHG  I EQS+ + K  KLDVHARLM+ YKQVP+WWF+         
Sbjct:   402 FAALSATIMHVALFHGREIWEQSKESFKEKKLDVHARLMQRYKQVPEWWFWCILVTNVGA 461

Query:   432 XXXMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPG 491
                    + D++QL WWG+L A  +A I TLPIG+I A TNQ PG +II +++IGY+ PG
Sbjct:   462 TIFACEYYNDQLQLPWWGVLLACTVAIIFTLPIGIITAITNQAPGLNIITEYIIGYIYPG 521

Query:   492 KPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCIFLVLLT 549
              P+AN+ FK+YG IS   A++FL D KLGHYMKIPPR M+ AQ++    SC F+ L T
Sbjct:   522 YPVANMCFKVYGYISMQQAITFLQDFKLGHYMKIPPRTMFMAQIVGTLISC-FVYLTT 578




GO:0015198 "oligopeptide transporter activity" evidence=IGI;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0006857 "oligopeptide transport" evidence=IGI
GO:0016020 "membrane" evidence=ISS
TAIR|locus:2173408 OPT4 "AT5G64410" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024372 OPT2 "oligopeptide transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137727 OPT6 "oligopeptide transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168616 OPT9 "oligopeptide transporter 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133882 OPT5 "oligopeptide transporter 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178398 OPT1 "AT5G55930" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168626 OPT8 "oligopeptide transporter 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000066065 AN7597 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0003352 OPT1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O23482OPT3_ARATHNo assigned EC number0.82800.96200.7232yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query554
TIGR00727 681 TIGR00727, ISP4_OPT, small oligopeptide transporte 1e-139
pfam03169 619 pfam03169, OPT, OPT oligopeptide transporter prote 1e-123
TIGR00728 606 TIGR00728, OPT_sfam, oligopeptide transporter, OPT 1e-108
>gnl|CDD|129810 TIGR00727, ISP4_OPT, small oligopeptide transporter, OPT family Back     alignment and domain information
 Score =  417 bits (1074), Expect = e-139
 Identities = 193/529 (36%), Positives = 298/529 (56%), Gaps = 14/529 (2%)

Query: 19  EERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILM 78
           E   P  EV   VP TDDPT+PV T RAWF+GL   T+    N FF+ R   ++++  ++
Sbjct: 1   EFDSPYPEVRAAVPPTDDPTIPVNTIRAWFIGLIWSTVGSGFNMFFSHRVPSISLNTPII 60

Query: 79  QIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSI 138
           Q+   P GK  A+I+P+    + G ++++ PGPFN+KEH+ IT+     VSF  G AY+ 
Sbjct: 61  QMLAYPCGKAWAKIIPDWTITIRGRKYNIIPGPFNVKEHMFITLMYA--VSF--GAAYTT 116

Query: 139 GAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFR 198
             I   K +YK +  F    L+ L+TQ +G+G+AG+LRR++V P    WP+NL  +++ +
Sbjct: 117 DIILAQKLFYKSAFGFGYQFLLSLSTQFIGFGFAGILRRFVVYPARALWPTNLVTITINK 176

Query: 199 ALHEKESKSKG---LTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQ 255
           ALH KE+       ++R +FF +V  ASF +   P Y+F  L+ F+W+ W  P++I   Q
Sbjct: 177 ALHGKENHEANGWKISRYKFFFLVFFASFIWNWFPTYIFQALSTFNWMTWIKPNNINLNQ 236

Query: 256 IGSGYHGLGIG-AFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDT 314
           I  G  GLGI    + DW  IS Y  SPLV P  S L + +G ++  +I++P  Y+  +T
Sbjct: 237 IFGGSTGLGINPISSFDWNQISGYINSPLVYPAWSYLTIYLGCILAFWIVIPAVYYS-NT 295

Query: 315 FDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFAR 374
           +  +  PI SN L+ + GH Y+ T+IL      ++  Y SY   + S   A+S G  FA 
Sbjct: 296 WYCQYLPISSNGLYDNFGHSYNVTEILDKDNKFDVKKYQSYSPPFYSTTNAVSYGLSFAS 355

Query: 375 FTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLL 434
               +TH  + HG  +    +        D H+ LMK+YK+VP WW+  + LG  G+ + 
Sbjct: 356 IPLMITHSIIVHGKLLFNALKDDDYP---DPHSNLMKAYKEVPDWWYLAVFLGFFGMGIA 412

Query: 435 MSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPI 494
               W  E     WG+       ++  +P  ++QATTN   G +++ +F++GY LPG+P+
Sbjct: 413 TVEHWPTE--TPVWGLFVCLIFNFVFLIPTTILQATTNISFGLNVLTEFIVGYALPGRPL 470

Query: 495 ANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCI 543
           A ++FK +G I+   A +F+SDLK+GHYMKIPPR ++  Q +       
Sbjct: 471 AMMIFKTFGYITDGQADNFVSDLKIGHYMKIPPRALFRGQCVATIWQIF 519


This model represents a family of transporters of small oligopeptides, demonstrated experimentally in three different species of yeast. A set of related proteins from the plant Arabidopsis thaliana forms an outgroup to the yeast set by neighbor joining analysis but is remarkably well conserved and is predicted here to have equivalent function [Transport and binding proteins, Amino acids, peptides and amines]. Length = 681

>gnl|CDD|217401 pfam03169, OPT, OPT oligopeptide transporter protein Back     alignment and domain information
>gnl|CDD|233105 TIGR00728, OPT_sfam, oligopeptide transporter, OPT superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 554
KOG2262 761 consensus Sexual differentiation process protein I 100.0
TIGR00727 681 ISP4_OPT small oligopeptide transporter, OPT famil 100.0
TIGR00728 654 OPT_sfam oligopeptide transporters, OPT superfamil 100.0
PF03169 624 OPT: OPT oligopeptide transporter protein; InterPr 100.0
TIGR00733 591 putative oligopeptide transporter, OPT family. Thi 100.0
COG1297 624 Predicted membrane protein [Function unknown] 99.97
PF03169624 OPT: OPT oligopeptide transporter protein; InterPr 81.96
>KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms] Back     alignment and domain information
Probab=100.00  E-value=3.9e-157  Score=1253.01  Aligned_cols=536  Identities=58%  Similarity=1.081  Sum_probs=522.5

Q ss_pred             CCCCCCCCCCCCchhhhhhcCCCCCCCCCCcchhhHHHHHHHHHHHHHHHhhhhcccccccchhHHHHHHHHHhHHHHHh
Q 008760           11 ENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMA   90 (554)
Q Consensus        11 ~~~~~~~~~~~sp~~evr~~v~~~Ddp~~p~~T~Ra~~lG~~~~~i~~~~n~~f~lr~~~~~~~~~~~~ll~~~~g~~~a   90 (554)
                      .||++++++|||||||||+.||++|||++|++|||+|++|++.|++++++||+|++|.++++++.+++|+++||+||+||
T Consensus        40 ~~e~~~ed~~~spv~EVrl~Vp~tDDptlPv~TfRmW~Lg~~~~iv~a~vNqFF~~R~~~lsis~i~aQi~~~PlGklma  119 (761)
T KOG2262|consen   40 DDENELEDEEDSPVPEVRLTVPPTDDPTLPVLTFRMWFLGLISCIVLAFVNQFFSYRYPPLSISAIVAQIATYPLGKLMA  119 (761)
T ss_pred             cccccccccccCcchhheeecCCCCCCCchhHhHHHHHHHHHHHHHHHHHhhhhcccCCCeehHHHHHHHHHHhHHHHHH
Confidence            44455677889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCceee-ecccccccCCCCCCccchheeeeeccccccccccccchhhHHHHHHHHhcCCccHHHHHHHHHHHHHhhh
Q 008760           91 RILPNKEFQ-VLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGY  169 (554)
Q Consensus        91 ~~lP~~~~~-~~~~~~~lNpgpf~~KEh~~i~imas~a~~~~~~~~~a~~~i~~~~~~y~~~~~~~~~il~~ls~q~lG~  169 (554)
                      |+||+|+++ .++|+|+|||||||.|||++|+++||++    +|.+|++.+|.+|++||++++++++++++++++|++||
T Consensus       120 ~~lP~~~~~~~~~~~fslNPGPFn~KEHvlitIfan~~----sg~aYat~Ii~~~k~fY~~~l~f~~~~ll~lttQ~lGy  195 (761)
T KOG2262|consen  120 KTLPTWKFGLGGRWSFSLNPGPFNVKEHVLITIFANIG----SGTAYATHIITAQKAFYKRNLSFGYAFLLVLTTQLLGY  195 (761)
T ss_pred             HhCCceeeecCcceEEEeCCCCCcchheeeeehhhhcc----CcchhhhHHHHHHHHHHhccccHHHHHHHHHHHHHhcc
Confidence            999999999 5889999999999999999999999999    89999999999999999999999999999999999999


Q ss_pred             HHhhhccceeeccCCCCCCchHHHHHHHHHhhcccCccc-ccchHHHHHHHHHHHHHHHhhcccccccccccchhhhccC
Q 008760          170 GWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSK-GLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWP  248 (554)
Q Consensus       170 g~Ag~lR~~lV~p~~l~wPs~lat~~l~~sLh~~~~~~~-~~sr~r~f~~~f~~~f~~~~~P~~~~p~L~~~~~~cwi~p  248 (554)
                      |+||++||++|+|++|.||++|++++||++||+++++++ +++|+|||.++|.+||+|||+|+|+||.|+++||.||+.|
T Consensus       196 GwAGl~Rk~lV~Pa~m~WPsnLvqvsLFraLHeke~~~~g~msR~rFF~ivfv~SFiyY~fPgylF~~Ls~~swvcW~~P  275 (761)
T KOG2262|consen  196 GWAGLFRKYLVYPASMWWPSNLVQVSLFRALHEKENKSKGNMSRYRFFLIVFVASFIYYWFPGYLFPILSSFSWVCWIWP  275 (761)
T ss_pred             cHhhhhHhhccCcHhhcCcchhHHHHHHHHHHhhhhhcccCccchhhhhHHHHHHHHHHHhhHHHHHHHhhhheeeEecc
Confidence            999999999999999999999999999999999988766 5999999999999999999999999999999999999999


Q ss_pred             CccceeeccccccccccccccccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCCCCchhcc
Q 008760          249 HSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLF  328 (554)
Q Consensus       249 ~n~~~~~lfG~~~GlGl~~~tfDWs~i~~~~gspl~~P~~~~~n~~~G~vl~~~ii~P~ly~~~n~w~~~~~P~~s~~~f  328 (554)
                      +|.+++|||||.+|||++|++|||++|++|+||||..|+++.+|.++|+++.++|+.|++||+ |.|+++++|+.|+++|
T Consensus       276 ~s~~~~qi~sg~~GLGi~~~tlDW~~IssylgSPLasP~~a~~n~~~gfvl~~~IV~Pi~Y~~-n~~~a~~fPI~Ss~lf  354 (761)
T KOG2262|consen  276 SSITANQIGSGLTGLGIGPFTLDWSQISSYLGSPLASPFFAIANVFLGFVLFIYIVLPILYWT-NTYDAKYFPIFSSSLF  354 (761)
T ss_pred             ccHHHHHhcccccccccccccccHHHHHHHcCCcchhhHHHHHHHhhhhhhhhhhhhhhHhhc-cceecceeceecCcce
Confidence            999999999999999999999999999999999999999999999999999999999999999 9999999999999999


Q ss_pred             ccCCceeeeeeecCCCCCCChhhHhhcCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhccCcchhhh
Q 008760          329 TSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHAR  408 (554)
Q Consensus       329 d~~G~~Y~~s~il~~~~~~~~~~y~~~sp~~l~~~~~l~~~~~fa~~~a~i~~~~l~~~~~i~~~~~~~~~~~~~D~h~~  408 (554)
                      |++|++||+++|+|+|+++|.+|||+|||+|+++.++++||++||+++|.++|++|+|+||||++.|++. ++++|+|.|
T Consensus       355 ~~tG~sYnvt~Il~~~f~ld~~~Y~~ysp~yls~~falsygl~faa~~a~i~Hv~Lf~gkdiw~~~~~~~-~k~~DiHtr  433 (761)
T KOG2262|consen  355 DHTGNSYNVTKILDSKFELDLDKYQEYSPLYLSTFFALSYGLGFAALSATIVHVALFNGKDIWQQTKKAF-NKKMDIHTR  433 (761)
T ss_pred             ecCCcEeceeeeecCccccchHHHhhcCCcceeHHHHHHHHHHHHHHHHHhhhheeeccHHHHHHHHhcc-ccCCCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999998866 558899999


Q ss_pred             hhhccCCCChHHHHHHHHHHHHhhheEEeeecCCccchHHHHHHHHHHHHHHHhhheeeEeecCCCcchhHHHHhhhhhc
Q 008760          409 LMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYV  488 (554)
Q Consensus       409 lm~~y~evP~wwy~~~~v~s~~l~i~~~~~~~~~~~lp~w~~llal~la~v~~i~~~~~~a~Tg~~~~l~~i~qli~G~~  488 (554)
                      +||||||||+|||++++++++++++++|+.|+++.|+|||++++|+++++++.+|.|+++|+||++|++|+++|+|.||+
T Consensus       434 lMkkYKeVP~WWf~~ili~s~~l~~~~~~~~~~~~q~PwWg~~va~~ia~vf~iPigii~AtTNq~~GLNiitE~i~Gy~  513 (761)
T KOG2262|consen  434 LMKKYKEVPDWWFLAILIVSLGLGLAACEGYKTQVQLPWWGLLVACAIAFVFTIPIGIIQATTNQTPGLNIITEYIIGYI  513 (761)
T ss_pred             HHHHhccCcHHHHHHHHHHHHHHHhhheeeecccccCchHHHHHHHHHHHHHhccHHHhhhhccCCccHHHHHHHHHHhh
Confidence            99999999999999999999999999999998777999999999999999999999999999999999999999999999


Q ss_pred             cCCcchhhHHHHHHHHHHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHHHHHHHHHhhhhc
Q 008760          489 LPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQVLVAQKSCIFLVLLTYRQ  552 (554)
Q Consensus       489 ~pG~~~anm~f~~~~~~~~~qa~~l~~DlKlG~y~kipPR~~f~aQliGtivg~~v~v~~~~~~  552 (554)
                      .||||+|||.||.||+.++.||+++++|+|+|||||+|||.||.+|++||+++++|++++.-.+
T Consensus       514 ~PgrPiAn~~FK~yGyism~Qal~f~~DlKlghYMKIPPR~mF~~Q~v~tivs~~Vn~gv~~W~  577 (761)
T KOG2262|consen  514 YPGRPIANLCFKTYGYISMTQALTFLQDLKLGHYMKIPPRSMFAVQLVGTIVAGFVNLGVAWWL  577 (761)
T ss_pred             cCCchHHHHHHHHhchhhHHHHHHHHhhccceeeecCChHHHHHHHHHHHHhheeeeHHhHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999987544



>TIGR00727 ISP4_OPT small oligopeptide transporter, OPT family Back     alignment and domain information
>TIGR00728 OPT_sfam oligopeptide transporters, OPT superfamily Back     alignment and domain information
>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast Back     alignment and domain information
>TIGR00733 putative oligopeptide transporter, OPT family Back     alignment and domain information
>COG1297 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00