Citrus Sinensis ID: 008833

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550--
MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPRFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLLKKQFQISSAECCNSKSLTSPGGCSP
cHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHccccccccccEEEEccHHHHHHHHcccccccccHHHHHHHHHHHcccccccccEEEEEccccccEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccc
ccHHHcccccccccEcHHHcccccccccHHHcccccccccccccccccccccccccccccccccccccccccHHEccccccccccccccccccccccccccHHcHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccHcHccHHcccccHcccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccEEEcHHHHHHccccccccHHHHHHHHHHHHHHccccccccccEEEEEcccHHHHHcccccccccccccHHHEHHHcccccEEcccEEEEEEccccEEEEEEEEccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHccccccHHHHHHHHHHccHccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
MEEQAENRNkrklnidweevlpgrnddvpaelivkksgpptpaqksvpmsddpgsgeeldrqipdqELGVRIARMKDTYSkvrhclpdkgkKILATVTRLEKECERRrlagavpvcldidgcdkltqspssdcftqrtpspqiqskssFTSVFREKMEENRDCREANAFDKELSILAhcdrrkmrsdgdlsqrgrqnvrsssrkwpfhkgdksfnsngsqkdrasltcpshqsgensssclpkkkesfevlpsknprlrkeqnlvlldedespvedaseesegslhietTEQADEFAECMIdakiyypsrvdpesveicytdinhlapaayltspIMNFYIRYLQlqasptnrairdchfFNTYFYSKLKEAvshkggdkdsFFIKFRRWWKgvnifqksyvlipihedvHWSLVIICipdkedesgpiilhldslklhcSLSIFSNIRSFLKEEWNYLkqevspsdlpIAERIWQhlprriddriiprfmeeAPERLKKKDLAMFgkrwfrpeeasGLRIKIRNLLKKQFQissaeccnsksltspggcsp
meeqaenrnkrklnidweevlpgrnDDVPAELIVKksgpptpaqksvpmsddpgsgeeldrqipdqeLGVRIARMKdtyskvrhclpdkgkkilATVTRLEKEcerrrlagavpvcLDIDGCDKLTQSPSSDcftqrtpspqiqskssftSVFREKMEENrdcreanafdkelsilahcdrrkmrsdgdlsqrgrqnvrsssrkwpfhkgdksfnsngsqKDRASltcpshqsgensssclpkkkesfevlpsknprlrkeqnlvlldedespvedaseesegslhiETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEavshkggdkDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQevspsdlpiaeRIWQHLPRRIDDRIIPRFmeeaperlkkkdlamfgkrwfrpeeasglrIKIRNLLKKQFQissaeccnsksltspggcsp
MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLprriddriiprFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLLKKQFQISSAECCNSKSLTSPGGCSP
********************************************************************GVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKL*************************************************************************************************************************************************************************EFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPRFMEEA**RLKKKDLAMFGKRWFRPEEASGLRIKIRNLLKKQFQISSAEC**************
****************WEEVLP***************************************************************************************************************************************************************************************************************************************************************************************DAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPRFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLLKK***********************
**********RKLNIDWEEVLPGRNDDVPAELIVKKSG*********************DRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQS*******************SFTSVFREKMEENRDCREANAFDKELSILAHCDRR**********************WPFHKGDKSF***************************PKKKESFEVLPSKNPRLRKEQNLVLLD******************IETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPRFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLLKKQFQISSAECCNS***********
*************NIDW**V*P**************************************R***D**LGVRIARMK**********************R*E**C****************************************************************************************************************************************************************************************TTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPRFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLLKKQFQIS******************
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MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPRFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLLKKQFQISSAECCNSKSLTSPGGCSP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query552 2.2.26 [Sep-21-2011]
Q2PS26584 Ubiquitin-like-specific p yes no 0.900 0.851 0.384 8e-96
Q8RWN0571 Ubiquitin-like-specific p no no 0.869 0.840 0.356 2e-79
Q8L7S0 931 Probable ubiquitin-like-s no no 0.422 0.250 0.261 2e-17
Q0WKV8 774 Probable ubiquitin-like-s no no 0.431 0.307 0.273 2e-17
O13769638 Ubiquitin-like-specific p yes no 0.179 0.155 0.339 1e-14
D3ZF421037 Sentrin-specific protease no no 0.208 0.110 0.278 8e-12
Q9BQF61050 Sentrin-specific protease no no 0.217 0.114 0.267 9e-12
Q8BUH81037 Sentrin-specific protease no no 0.208 0.110 0.278 1e-11
Q9HC62589 Sentrin-specific protease no no 0.273 0.256 0.309 2e-11
A7MBJ21047 Sentrin-specific protease no no 0.208 0.109 0.278 2e-11
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana GN=ULP1D PE=1 SV=1 Back     alignment and function desciption
 Score =  351 bits (901), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 228/593 (38%), Positives = 320/593 (53%), Gaps = 96/593 (16%)

Query: 10  KRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELG 69
           K+   IDW   +  + D+VP EL +  +  PTP       SDD     +L   + D++L 
Sbjct: 16  KKDFVIDWSSAM-DKEDEVP-ELEIVNTTKPTPPPPPTFFSDDQTDSPKL---LTDRDLD 70

Query: 70  VRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGA----------------- 112
            ++ R K   + +   LPDKG+KI   +  LE+E +RR L G+                 
Sbjct: 71  EQLERKKAILT-LGPGLPDKGEKIRLKIADLEEEKQRRVLEGSKMEVDRSSKVVSSTSSG 129

Query: 113 ---VPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAF 169
              +P    +        + S D   Q     +  S+S+F++VF +      D +   AF
Sbjct: 130 SDVLPQGNAVSKDTSRGNADSKDTSRQGNADSKEVSRSTFSAVFSKP---KTDSQSKKAF 186

Query: 170 DKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKW--------------PFHKGDKSFN 215
            KEL  L  C+RRK ++       GR+ V   S  W               F  G K   
Sbjct: 187 GKELEDLG-CERRKHKA-------GRKPVTRLSNGWRLLPDVGKAEHSAKQFDSGLKESK 238

Query: 216 SNGSQKDRASLTCPSHQSG---------------ENSSSCLPKKKESFEVLPSKNPRLRK 260
            N   K+      P   S                 ++S     ++ S+E  PS++ R RK
Sbjct: 239 GNKKSKEPYGKKRPMESSTYSLIDDDDDDDDDDDNDTSGHETPREWSWEKSPSQSSRRRK 298

Query: 261 EQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICY 320
           +    +++ DE       EE++ S      EQA E  E + +  I YP+R DP  V++C 
Sbjct: 299 KSEDTVINVDE-------EEAQPST---VAEQAAELPEGLQE-DICYPTRDDPHFVQVCL 347

Query: 321 TDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDK 380
            D+  LAP  YLTSP+MNFY+R+LQ Q S +N+   DCHFFNTYFY KL +AV++KG DK
Sbjct: 348 KDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFNTYFYKKLSDAVTYKGNDK 407

Query: 381 DSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHC 440
           D+FF++FRRWWKG+++F+K+Y+ IPIHED+HWSLVI+CIPDK+DESG  ILHLDSL LH 
Sbjct: 408 DAFFVRFRRWWKGIDLFRKAYIFIPIHEDLHWSLVIVCIPDKKDESGLTILHLDSLGLHS 467

Query: 441 SLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRI-------------- 486
             SI  N++ FLK+EWNYL Q+    DLPI+E++W++LPRRI + +              
Sbjct: 468 RKSIVENVKRFLKDEWNYLNQDDYSLDLPISEKVWKNLPRRISEAVVQVPQQKNDFDCGP 527

Query: 487 -----IPRFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLLKKQFQIS 534
                I RF+EEAP+RLK+KDL MF K+WFRP+EAS LRIKIRN L + F++S
Sbjct: 528 FVLFFIKRFIEEAPQRLKRKDLGMFDKKWFRPDEASALRIKIRNTLIELFRVS 580
Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. Cleaves precursors of SUM1 and SUM2, but not of SUM3 or SUM5. Able to release SUM1 and SUM2 from conjugates, but unable to cleave SUM3. Protease activity mainly directed at deconjugating SUM1 and SUM2 from their target proteins. Regulates salt stress responses and flowering time. Redundant with ULP1C.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: 6EC: 8
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana GN=ULP1C PE=1 SV=1 Back     alignment and function description
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis thaliana GN=ULP2B PE=2 SV=3 Back     alignment and function description
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis thaliana GN=ULP2A PE=2 SV=2 Back     alignment and function description
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2 Back     alignment and function description
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1 Back     alignment and function description
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4 Back     alignment and function description
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1 Back     alignment and function description
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3 Back     alignment and function description
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query552
356524061594 PREDICTED: LOW QUALITY PROTEIN: ubiquiti 0.942 0.875 0.446 1e-111
255568770283 sentrin/sumo-specific protease, putative 0.474 0.925 0.679 1e-109
356565950586 PREDICTED: ubiquitin-like-specific prote 0.869 0.819 0.469 1e-106
145336892584 ubiquitin-like-specific protease 1D [Ara 0.900 0.851 0.384 5e-94
297840529593 cysteine-type peptidase [Arabidopsis lyr 0.911 0.848 0.379 1e-90
297843874569 Ulp1 protease family protein [Arabidopsi 0.880 0.854 0.359 4e-80
3249071547 Contains similarity to protein-tyrosine 0.862 0.870 0.365 6e-79
296086553221 unnamed protein product [Vitis vinifera] 0.353 0.882 0.668 4e-78
359473447304 PREDICTED: ubiquitin-like-specific prote 0.355 0.644 0.660 6e-78
42571423570 ubiquitin-like-specific protease 1C [Ara 0.867 0.840 0.357 1e-77
>gi|356524061|ref|XP_003530651.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-like-specific protease 1D-like [Glycine max] Back     alignment and taxonomy information
 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 257/575 (44%), Positives = 339/575 (58%), Gaps = 55/575 (9%)

Query: 1   MEEQAENRNKRK--LNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEE 58
           MEEQ   + K K  L IDW      ++D  P +  +       PA  S    D       
Sbjct: 1   MEEQQRQQQKPKSPLPIDWSRQF--QSDSPPRDYDI------LPASSSADQDDLSA---- 48

Query: 59  LDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLD 118
               IPD +L   I   K T       LPDKG K+ AT+ R ++E   R     +    D
Sbjct: 49  ----IPDHKLRESIQSKKRTLDVTGKNLPDKGTKLRATIDRYQQELTHREQQKRLRQEDD 104

Query: 119 IDGCDKLTQSPSSDCFTQRTPS--------PQIQSKSSFTSVFREKMEENRDCREANAFD 170
            D   +  Q+ S+D  T+   +         Q QS+S+FTS F ++ME+N +C  ++AF 
Sbjct: 105 KDRKPQPGQASSTDAVTEGVSNDLREENLLSQAQSQSTFTSCFVKQMEDNTNCTASDAFR 164

Query: 171 KELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKW--PFHKGDKSFNSNGSQKDRASLTC 228
           KE+S+  H D +K++  G+  +R R    S   ++  P     ++  S+G +  RA+ + 
Sbjct: 165 KEMSLFKHSDYQKIQDKGEPRRRKRHRSSSRQLQFQCPSKLSKRNTFSDG-KTCRATSSF 223

Query: 229 PSHQSGENSSSCLPK---KKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSL 285
               +G N   C PK   +K++F+ +     R RK   +VL  +D+   ++  E  +   
Sbjct: 224 GLRNNGRNLPRCYPKVHGRKDAFQAIQLDGSRSRKGLPIVLDVDDDDGGDNNDEYDDDEA 283

Query: 286 HI-ETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYL 344
           HI E TE  ++F E + +AKIY+PSR DPE VEIC+TD N LAP  YLTS IMNFYI+YL
Sbjct: 284 HIVEKTE--NKFPEYLKEAKIYFPSRDDPECVEICFTDTNCLAPEGYLTSTIMNFYIQYL 341

Query: 345 QLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLI 404
           Q QA  TNR++   HFFNTYFY KLKEAVS+K  D +  F KFRRWWKGVNIFQK+YVLI
Sbjct: 342 QQQALLTNRSLSAYHFFNTYFYKKLKEAVSYKQSDXE-IFAKFRRWWKGVNIFQKAYVLI 400

Query: 405 PIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVS 464
           PIHED+HWSL+IICIPDKEDESGPIILHLDSL LH S S+F NI+S+L EE NY+ +E  
Sbjct: 401 PIHEDLHWSLIIICIPDKEDESGPIILHLDSLGLHSSKSVFDNIKSYLIEEKNYMDREDM 460

Query: 465 PSDLPIAERIWQHLPRRIDDRIIP-------------------RFMEEAPERLKKKDLAM 505
            SD+ IA+RIW+ LPRRI+ +II                    RFMEEAPERLK KDL M
Sbjct: 461 ASDVSIADRIWKCLPRRIESQIIQVPQQKNDYDCGLFVLYFIERFMEEAPERLKMKDLDM 520

Query: 506 FGKRWFRPEEASGLRIKIRNLLKKQFQISSAECCN 540
           FG+RWF+P+EAS LR+KIR LL ++ Q S  + CN
Sbjct: 521 FGRRWFKPQEASNLRVKIRKLLVEKLQNSVTDNCN 555

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255568770|ref|XP_002525356.1| sentrin/sumo-specific protease, putative [Ricinus communis] gi|223535319|gb|EEF36994.1| sentrin/sumo-specific protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356565950|ref|XP_003551198.1| PREDICTED: ubiquitin-like-specific protease 1D-like [Glycine max] Back     alignment and taxonomy information
>gi|145336892|ref|NP_176228.3| ubiquitin-like-specific protease 1D [Arabidopsis thaliana] gi|122202545|sp|Q2PS26.1|ULP1D_ARATH RecName: Full=Ubiquitin-like-specific protease 1D; AltName: Full=Protein OVERLY TOLERANT TO SALT 1 gi|83316254|gb|ABC02400.1| SUMO isopeptidase [Arabidopsis thaliana] gi|332195546|gb|AEE33667.1| ubiquitin-like-specific protease 1D [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297840529|ref|XP_002888146.1| cysteine-type peptidase [Arabidopsis lyrata subsp. lyrata] gi|297333987|gb|EFH64405.1| cysteine-type peptidase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297843874|ref|XP_002889818.1| Ulp1 protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297335660|gb|EFH66077.1| Ulp1 protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|3249071|gb|AAC24055.1| Contains similarity to protein-tyrosine phosphatase 2 gb|L15420 from Dictyostelium discoideum. EST gb|N38718 comes from this g [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|296086553|emb|CBI32142.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359473447|ref|XP_003631300.1| PREDICTED: ubiquitin-like-specific protease 1D-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|42571423|ref|NP_973802.1| ubiquitin-like-specific protease 1C [Arabidopsis thaliana] gi|332190475|gb|AEE28596.1| ubiquitin-like-specific protease 1C [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query552
TAIR|locus:2195598584 ULP1D "UB-like protease 1D" [A 0.605 0.571 0.423 3.1e-83
TAIR|locus:2194574571 OTS2 "OVERLY TOLERANT TO SALT 0.387 0.374 0.497 2.8e-80
ZFIN|ZDB-GENE-070912-345991 si:dkey-100n23.3 "si:dkey-100n 0.213 0.119 0.293 1e-16
RGD|13055101037 Senp7 "SUMO1/sentrin specific 0.262 0.139 0.261 9.1e-14
DICTYBASE|DDB_G0289557 778 DDB_G0289557 "peptidase C48 fa 0.266 0.188 0.343 1.6e-13
UNIPROTKB|Q9BQF61050 SENP7 "Sentrin-specific protea 0.262 0.138 0.261 4.9e-13
UNIPROTKB|J3QT09985 SENP7 "Sentrin-specific protea 0.262 0.147 0.261 1.2e-12
POMBASE|SPAC17A5.07c638 ulp2 "SUMO deconjugating cyste 0.322 0.278 0.303 1.8e-12
RGD|1559489413 RGD1559489 "similar to sentrin 0.242 0.324 0.324 9.2e-12
RGD|1561410437 RGD1561410 "similar to sentrin 0.242 0.306 0.324 1.1e-11
TAIR|locus:2195598 ULP1D "UB-like protease 1D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 685 (246.2 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
 Identities = 157/371 (42%), Positives = 218/371 (58%)

Query:   130 SSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGD 189
             S D   Q     +  S+S+F++VF +      D +   AF KEL  L  C+RRK ++   
Sbjct:   150 SKDTSRQGNADSKEVSRSTFSAVFSKP---KTDSQSKKAFGKELEDLG-CERRKHKAGRK 205

Query:   190 ----LSQRGR--QNV-RSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQS--------- 233
                 LS   R   +V ++      F  G K    N   K+      P   S         
Sbjct:   206 PVTRLSNGWRLLPDVGKAEHSAKQFDSGLKESKGNKKSKEPYGKKRPMESSTYSLIDDDD 265

Query:   234 -----GENSSSCLPKKKE-SFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHI 287
                   +N +S     +E S+E  PS++ R RK+    +++ DE       EE++ S   
Sbjct:   266 DDDDDDDNDTSGHETPREWSWEKSPSQSSRRRKKSEDTVINVDE-------EEAQPST-- 316

Query:   288 ETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQ 347
                EQA E  E + +  I YP+R DP  V++C  D+  LAP  YLTSP+MNFY+R+LQ Q
Sbjct:   317 -VAEQAAELPEGLQE-DICYPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMRFLQQQ 374

Query:   348 ASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
              S +N+   DCHFFNTYFY KL +AV++KG DKD+FF++FRRWWKG+++F+K+Y+ IPIH
Sbjct:   375 ISSSNQISADCHFFNTYFYKKLSDAVTYKGNDKDAFFVRFRRWWKGIDLFRKAYIFIPIH 434

Query:   408 EDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSD 467
             ED+HWSLVI+CIPDK+DESG  ILHLDSL LH   SI  N++ FLK+EWNYL Q+    D
Sbjct:   435 EDLHWSLVIVCIPDKKDESGLTILHLDSLGLHSRKSIVENVKRFLKDEWNYLNQDDYSLD 494

Query:   468 LPIAERIWQHL 478
             LPI+E++W++L
Sbjct:   495 LPISEKVWKNL 505
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
GO:0016926 "protein desumoylation" evidence=RCA;IDA
GO:0016929 "SUMO-specific protease activity" evidence=IDA
GO:0009651 "response to salt stress" evidence=IGI
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IGI;RCA
GO:0007155 "cell adhesion" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2194574 OTS2 "OVERLY TOLERANT TO SALT 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-345 si:dkey-100n23.3 "si:dkey-100n23.3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1305510 Senp7 "SUMO1/sentrin specific peptidase 7" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0289557 DDB_G0289557 "peptidase C48 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BQF6 SENP7 "Sentrin-specific protease 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J3QT09 SENP7 "Sentrin-specific protease 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
POMBASE|SPAC17A5.07c ulp2 "SUMO deconjugating cysteine peptidase Ulp2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
RGD|1559489 RGD1559489 "similar to sentrin 15" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|1561410 RGD1561410 "similar to sentrin 15" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q2PS26ULP1D_ARATH3, ., 4, ., 2, 2, ., 6, 80.38440.90030.8510yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ULP1D
ULP1D (UB-LIKE PROTEASE 1D); SUMO-specific protease/ cysteine-type peptidase; Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity- it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP-OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S-OTS1 increases salt tolerance and reduce [...] (584 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT5G60190
Ulp1 protease family protein; Encodes a protein that can cleave residues from the C-terminus of [...] (226 aa)
      • 0.867
SUMO2
SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag; Encodes a small ubiquit [...] (116 aa)
      • 0.790
SUMO1
SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag; Encodes a small ubiquit [...] (100 aa)
      • 0.790
SUMO3
SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3); protein binding / protein tag; Encodes a small ubiquit [...] (111 aa)
      • 0.784
SUMO5
SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5); protein tag; Encodes a small ubiquitin-like modifier [...] (108 aa)
      • 0.784
SIZ1
SIZ1; DNA binding / SUMO ligase; Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase [...] (885 aa)
      • 0.679
SCE1
SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase; Encodes a SUMO liagse that directs the attachmen [...] (160 aa)
      • 0.657
AT4G25600
ShTK domain-containing protein; ShTK domain-containing protein; FUNCTIONS IN- oxidoreductase ac [...] (291 aa)
      • 0.623
AT2G12100
transposable element gene; similar to unknown protein [Arabidopsis thaliana] (TAIR-AT5G28480.1) [...] (1224 aa)
      • 0.591
SAE2
SAE2 (SUMO-ACTIVATING ENZYME 2); SUMO activating enzyme; Encodes one of the two subunits of the [...] (700 aa)
      • 0.534

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query552
pfam02902216 pfam02902, Peptidase_C48, Ulp1 protease family, C- 1e-23
COG5160578 COG5160, ULP1, Protease, Ulp1 family [Posttranslat 5e-19
PLN03189490 PLN03189, PLN03189, Protease specific for SMALL UB 7e-10
>gnl|CDD|217278 pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal catalytic domain Back     alignment and domain information 
 Score = 99.1 bits (247), Expect = 1e-23
 Identities = 52/213 (24%), Positives = 84/213 (39%), Gaps = 37/213 (17%)

Query: 331 YLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAV----------SHKGGDK 380
           +L   +++FY++ L  +    +      HF N++FYSKL +            S K G K
Sbjct: 2   WLNDTVIDFYLKLLAHRLESEDYKNERVHFLNSFFYSKLTKLFPDFKKCKSKKSFKWGKK 61

Query: 381 DSFFIKFRRWWKGVN---IFQKSYVLIPIHED-VHWSLVIICIPDKEDESGPIILHLDSL 436
             F+   RRW + VN   +F    + IPI+ D  HW L+II +P K       I  LDSL
Sbjct: 62  KDFYNGVRRWTRKVNKKWLFDVDIIYIPINWDGKHWVLLIINLPKKT------ITILDSL 115

Query: 437 KLH------CSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDD------ 484
                      +    N+  +L  E    +Q+         +R+   +P++ +       
Sbjct: 116 ISLHTEAVKKRIRPIDNMLPYLMSEALKKEQDDPDLTPFEIKRL-TKVPQQPNSGDCGPY 174

Query: 485 --RIIPRFMEEAPERL--KKKDLAMFGKRWFRP 513
             + I    E  P       KD+  F K+    
Sbjct: 175 VLKFIELLAEGVPFEFLTADKDVDRFRKKLAVD 207

This domain contains the catalytic triad Cys-His-Asn. Length = 216
>gnl|CDD|227489 COG5160, ULP1, Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|215622 PLN03189, PLN03189, Protease specific for SMALL UBIQUITIN-RELATED MODIFIER (SUMO); Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 552
KOG0778511 consensus Protease, Ulp1 family [Posttranslational 100.0
PLN03189490 Protease specific for SMALL UBIQUITIN-RELATED MODI 100.0
COG5160578 ULP1 Protease, Ulp1 family [Posttranslational modi 100.0
PF02902216 Peptidase_C48: Ulp1 protease family, C-terminal ca 99.93
KOG0779595 consensus Protease, Ulp1 family [Posttranslational 99.93
KOG3246223 consensus Sentrin-specific cysteine protease (Ulp1 99.9
PF03290423 Peptidase_C57: Vaccinia virus I7 processing peptid 94.68
PRK11836403 deubiquitinase; Provisional 92.26
PF15328223 GCOM2: Putative GRINL1B complex locus protein 2 90.19
PRK14848317 deubiquitinase SseL; Provisional 85.69
>KOG0778 consensus Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.3e-44  Score=385.23  Aligned_cols=215  Identities=26%  Similarity=0.441  Sum_probs=177.0

Q ss_pred             ccCCCCccchHHHHHHHHhhccceeecCCCCCCCCeEEecchhcccCCCCCcCHHHHHHHHHHHHHhcCCCCcCCCcEEE
Q 008833          281 SEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHF  360 (552)
Q Consensus       281 ~~~~~~~~~~e~~~~~~~~~~~~~i~yp~~~~~~~i~Lt~~DL~~L~p~~WLND~IInFYl~~L~~~~~~~~~~~~~v~~  360 (552)
                      .+..+++++.+...++..++.... .--.--...+|.||.+||.||.+++||||+||||||++|.+....+.. .++||+
T Consensus       284 ~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~i~It~~dl~tl~~~~WLNDevINfYm~ll~ers~~~~~-yp~~h~  361 (511)
T KOG0778|consen  284 KEDSFPPLTEEREAQVQRAFSSRN-STEILVTHFNIDITGKDLQTLRPGNWLNDEVINFYMELLKERSKKDSK-YPKVHA  361 (511)
T ss_pred             CccccccccHHHHHHHHHHhccCC-cccceehhccccccHHHHhhccCccchhHHHHHHHHHHHHhhccccCC-CceEEE
Confidence            455677777666677776665311 111111245699999999999999999999999999999999876543 789999


Q ss_pred             EchhhHHHHHHhhhcCCCCchhhhHHHhhhhccccccccceEEEeeecCcceEEEEEEcCCCCCCCCCeEEEEcCCCCCC
Q 008833          361 FNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHC  440 (552)
Q Consensus       361 fnTfFy~kL~~~~~~kg~d~~~~y~~VkrWtk~~dLfekd~IfIPIn~~~HWsLvVI~~p~k~~e~~p~I~~~DSL~~~~  440 (552)
                      ||||||++|...          +|+.|+|||+++|||++|+||||||.++||+|+||+...+      +|.|||||++..
T Consensus       362 FnTFFy~kL~~~----------gy~~VkRWTk~v~if~~d~i~vPIH~~vHW~l~vid~r~k------~i~y~DS~~~~~  425 (511)
T KOG0778|consen  362 FNTFFYTKLVGR----------GYAGVKRWTKKVDIFDKDIIFVPIHLGVHWCLAVIDLREK------TIEYYDSLGGGP  425 (511)
T ss_pred             Eechhhhhhhhc----------chHHHHhHhhccCccccceeEeeeecCceEEEEEEEcccc------eEEEeeccCCCC
Confidence            999999999863          6999999999999999999999999999999999999998      999999999765


Q ss_pred             ChhHHHHHHHHHHHHHHhhhccCCCCCccccccccccCCCccCCCchhhhhhcccccccCCCCCccccc-----------
Q 008833          441 SLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPRFMEEAPERLKKKDLAMFGKR-----------  509 (552)
Q Consensus       441 ~~~i~~~l~~yL~~E~~~k~~~~~~~d~pi~~~~w~~vP~Q~N~~Dcg~Fi~~~PqQ~n~~DCGvF~~~-----------  509 (552)
                      ++ ++..|+.||++|+..+.+.    ++.+  ..|..           .|+.++|+|.||+|||||+|+           
T Consensus       426 nr-~~~aL~~Yl~~E~~~k~~~----~~d~--s~w~~-----------~~~~~iP~Q~Ng~DCG~f~c~~~~~~s~~~p~  487 (511)
T KOG0778|consen  426 NR-ICDALAKYLQDESRDKSKK----DFDV--SGWTI-----------EFVQNIPQQRNGSDCGMFVCKYADYISRDVPL  487 (511)
T ss_pred             cc-hHHHHHHHHHHHHhhhhcC----CCCc--cchhh-----------hhhhccccccCCCccceEEeeechhhccCCCc
Confidence            53 6699999999999887543    2211  24663           467789999999999999874           


Q ss_pred             ccCHHHHHHHHHHHHHHHHHHH
Q 008833          510 WFRPEEASGLRIKIRNLLKKQF  531 (552)
Q Consensus       510 wF~~edi~~lR~~I~~LIl~L~  531 (552)
                      ||++.||+.+|++|+.+|+.+.
T Consensus       488 ~ftq~dmp~fR~~m~~eI~~~~  509 (511)
T KOG0778|consen  488 TFTQQDMPYFRKKMAKEILHLK  509 (511)
T ss_pred             ccChhhhHHHHHHHHHHHHhhh
Confidence            6999999999999999999763

>PLN03189 Protease specific for SMALL UBIQUITIN-RELATED MODIFIER (SUMO); Provisional Back     alignment and domain information
>COG5160 ULP1 Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF02902 Peptidase_C48: Ulp1 protease family, C-terminal catalytic domain This family belongs to family C48 of the peptidase classification Back     alignment and domain information
>KOG0779 consensus Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3246 consensus Sentrin-specific cysteine protease (Ulp1 family) [General function prediction only] Back     alignment and domain information
>PF03290 Peptidase_C57: Vaccinia virus I7 processing peptidase; InterPro: IPR004970 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK11836 deubiquitinase; Provisional Back     alignment and domain information
>PF15328 GCOM2: Putative GRINL1B complex locus protein 2 Back     alignment and domain information
>PRK14848 deubiquitinase SseL; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query552
3eay_A323 Crystal Structure Of The Human Senp7 Catalytic Doma 8e-12
2io0_A232 Crystal Structure Of Human Senp2 In Complex With Pr 2e-11
1tgz_A226 Structure Of Human Senp2 In Complex With Sumo-1 Len 3e-11
2xph_A238 Crystal Structure Of Human Senp1 With The Bound Cob 6e-09
2xre_A230 Detection Of Cobalt In Previously Unassigned Human 8e-09
2iy0_A226 Senp1 (Mutant) Sumo1 Rangap Length = 226 1e-08
2iyc_A226 Senp1 Native Structure Length = 226 1e-08
2ckg_A225 The Structure Of Senp1 Sumo-2 Co-Complex Suggests A 1e-08
2g4d_A205 Crystal Structure Of Human Senp1 Mutant (C603s) In 2e-08
2hkp_A221 Sumo Protease Ulp1 With The Catalytic Cysteine Oxid 3e-05
1euv_A221 X-Ray Structure Of The C-Terminal Ulp1 Protease Dom 3e-05
>pdb|3EAY|A Chain A, Crystal Structure Of The Human Senp7 Catalytic Domain Length = 323 Back     alignment and structure 
Iteration: 1

 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 300 MIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCH 359
           ++   I YP       + +   D+  L    +L   I++FY++YL L+ + ++  +   H
Sbjct: 17  LVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKA-SDELVERSH 75
Query: 360 FFNTYFYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWS 413
            F+++FY  L    ++   D  +  +  RR      W + +NIF K Y+ +P++E  HW 
Sbjct: 76  IFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWY 135
Query: 414 LVIICIP 420
           L +IC P
Sbjct: 136 LAVICFP 142
>pdb|2IO0|A Chain A, Crystal Structure Of Human Senp2 In Complex With Presumo-2 Length = 232 Back     alignment and structure
>pdb|1TGZ|A Chain A, Structure Of Human Senp2 In Complex With Sumo-1 Length = 226 Back     alignment and structure
>pdb|2XPH|A Chain A, Crystal Structure Of Human Senp1 With The Bound Cobalt Length = 238 Back     alignment and structure
>pdb|2XRE|A Chain A, Detection Of Cobalt In Previously Unassigned Human Senp1 Structure Length = 230 Back     alignment and structure
>pdb|2IY0|A Chain A, Senp1 (Mutant) Sumo1 Rangap Length = 226 Back     alignment and structure
>pdb|2IYC|A Chain A, Senp1 Native Structure Length = 226 Back     alignment and structure
>pdb|2CKG|A Chain A, The Structure Of Senp1 Sumo-2 Co-Complex Suggests A Structural Basis For Discrimination Between Sumo Paralogues During Processing Length = 225 Back     alignment and structure
>pdb|2G4D|A Chain A, Crystal Structure Of Human Senp1 Mutant (C603s) In Complex With Sumo-1 Length = 205 Back     alignment and structure
>pdb|2HKP|A Chain A, Sumo Protease Ulp1 With The Catalytic Cysteine Oxidized To A Sulfenic Acid Length = 221 Back     alignment and structure
>pdb|1EUV|A Chain A, X-Ray Structure Of The C-Terminal Ulp1 Protease Domain In Complex With Smt3, The Yeast Ortholog Of Sumo Length = 221 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query552
2xph_A238 Sentrin-specific protease 1; hydrolase, cysteine p 7e-24
3eay_A323 Sentrin-specific protease 7; ULP, SENP, SUMO, ubiq 1e-23
1th0_A226 SMT3-, sentrin-specific protease 2; SUMO, AXAM, SE 2e-20
1euv_A221 ULP1 protease; SUMO hydrolase, ubiquitin-like prot 7e-18
2bkr_A212 Sentrin-specific protease 8; protein-binding-hydro 1e-14
2oix_A186 Xanthomonas outer protein D; CLAN CE family 48 cys 4e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>2xph_A Sentrin-specific protease 1; hydrolase, cysteine protease, thiol protease; 2.40A {Homo sapiens} PDB: 2xre_A 2iyc_A 2iyd_A 2iy1_A 2iy0_A 2ckg_A 2ckh_A 2g4d_A Length = 238 Back     alignment and structure
 Score = 99.5 bits (247), Expect = 7e-24
 Identities = 53/246 (21%), Positives = 95/246 (38%), Gaps = 29/246 (11%)

Query: 273 PVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYL 332
            + D   +SE      T E   E      +         +   + I   DI  L    +L
Sbjct: 2   AMADIGSDSEDEFPEITEEMEKEIKNVFRNGNQDEV-LSEAFRLTITRKDIQTLNHLNWL 60

Query: 333 TSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWK 392
              I+NFY+  L  ++          H FNT+F++KLK A           +   +RW K
Sbjct: 61  NDEIINFYMNMLMERSKEKGL--PSVHAFNTFFFTKLKTA----------GYQAVKRWTK 108

Query: 393 GVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFL 452
            V++F    +L+PIH  VHW L ++    K       I + DS+    +      +  +L
Sbjct: 109 KVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDSMGGINN-EACRILLQYL 161

Query: 453 KEEWNYLK-QEVSPSDLPIAERIWQHLPRRIDD--------RIIPRFMEEAPERLKKKDL 503
           K+E    K +E   +   +  +  Q +P++++         +      ++ P    ++ +
Sbjct: 162 KQESIDKKRKEFDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHM 221

Query: 504 AMFGKR 509
             F KR
Sbjct: 222 PYFRKR 227
>3eay_A Sentrin-specific protease 7; ULP, SENP, SUMO, ubiquitin, crystal, alternative splicing, hydrolase, phosphoprotein, polymorphism, thiol protease; 2.40A {Homo sapiens} Length = 323 Back     alignment and structure
>1th0_A SMT3-, sentrin-specific protease 2; SUMO, AXAM, SENP, ULP, cell cycle, hydrolase; 2.20A {Homo sapiens} SCOP: d.3.1.7 PDB: 1tgz_A 2io0_A 2io1_A 2io2_A 2io3_A Length = 226 Back     alignment and structure
>1euv_A ULP1 protease; SUMO hydrolase, ubiquitin-like protease 1, SMT3 hydrolase desumoylating enzyme, cysteine protease; 1.60A {Saccharomyces cerevisiae} SCOP: d.3.1.7 PDB: 2hkp_A 2hl8_A 2hl9_A Length = 221 Back     alignment and structure
>2bkr_A Sentrin-specific protease 8; protein-binding-hydrolase complex, ubiquitin, hydrolase, Pro thiol protease, UBL conjugation pathway, ubiquitin/hydrolas complex; 1.90A {Homo sapiens} SCOP: d.3.1.7 PDB: 2bkq_A 1xt9_A Length = 212 Back     alignment and structure
>2oix_A Xanthomonas outer protein D; CLAN CE family 48 cysteine protease, type III secreted effec desumoylating enzyme; 1.80A {Xanthomonas euvesicatoria} PDB: 2oiv_A Length = 186 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query552
3eay_A323 Sentrin-specific protease 7; ULP, SENP, SUMO, ubiq 100.0
1th0_A226 SMT3-, sentrin-specific protease 2; SUMO, AXAM, SE 100.0
2xph_A238 Sentrin-specific protease 1; hydrolase, cysteine p 100.0
1euv_A221 ULP1 protease; SUMO hydrolase, ubiquitin-like prot 100.0
2bkr_A212 Sentrin-specific protease 8; protein-binding-hydro 100.0
2oix_A186 Xanthomonas outer protein D; CLAN CE family 48 cys 99.95
2oix_A186 Xanthomonas outer protein D; CLAN CE family 48 cys 86.88
2bkr_A212 Sentrin-specific protease 8; protein-binding-hydro 86.49
1th0_A226 SMT3-, sentrin-specific protease 2; SUMO, AXAM, SE 84.69
1euv_A221 ULP1 protease; SUMO hydrolase, ubiquitin-like prot 83.81
2xph_A238 Sentrin-specific protease 1; hydrolase, cysteine p 81.82
>3eay_A Sentrin-specific protease 7; ULP, SENP, SUMO, ubiquitin, crystal, alternative splicing, hydrolase, phosphoprotein, polymorphism, thiol protease; 2.40A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2.3e-46  Score=386.28  Aligned_cols=232  Identities=24%  Similarity=0.476  Sum_probs=183.4

Q ss_pred             ceeecCCCCCCCCeEEecchhcccCCCCCcCHHHHHHHHHHHHHhcCCCCcCCCcEEEEchhhHHHHHHhhhcC-CCC--
Q 008833          303 AKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHK-GGD--  379 (552)
Q Consensus       303 ~~i~yp~~~~~~~i~Lt~~DL~~L~p~~WLND~IInFYl~~L~~~~~~~~~~~~~v~~fnTfFy~kL~~~~~~k-g~d--  379 (552)
                      ..|+||+++.+++++|+.+||.||.+++||||+||||||+||..+... .....++|+||||||++|....... +.+  
T Consensus        20 ~~~~yP~~~~k~~i~it~~Dl~~L~~~~wLND~IInFyl~~L~~e~~~-~~~~~r~h~FnSFFy~kL~~~~~~~~~~~~~   98 (323)
T 3eay_A           20 KLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKAS-DELVERSHIFSSFFYKCLTRKENNLTEDNPN   98 (323)
T ss_dssp             EEEEESCTTSSSCEEEEHHHHHTTSTTCCCCHHHHHHHHHHHHHHTSC-HHHHHTEEECCTHHHHHHSCC--------CC
T ss_pred             eeEEeCCCCCCCceEEEHHHHHhhCCCCCcCHHHHHHHHHHHHhhhcc-ccccCcEEEEchHHHHHHHhccccccccccc
Confidence            369999998899999999999999999999999999999999755432 1234789999999999997642100 000  


Q ss_pred             ---chhhhHHHhhhhccccccccceEEEeeecCcceEEEEEEcCCCCC--------------------------------
Q 008833          380 ---KDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKED--------------------------------  424 (552)
Q Consensus       380 ---~~~~y~~VkrWtk~~dLfekd~IfIPIn~~~HWsLvVI~~p~k~~--------------------------------  424 (552)
                         ...+|.+|+|||+++|||++||||||||.+.||+|+|||+|.++.                                
T Consensus        99 ~s~~~~~y~~VrrWtrkvdlf~kD~I~IPIn~~~HW~LaVI~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  178 (323)
T 3eay_A           99 LSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLRT  178 (323)
T ss_dssp             SCHHHHHHTTSGGGGTTCCGGGCSEEEEEEEETTEEEEEEEECTTCSSCBCC----------------------------
T ss_pred             chhHHHHHHHHHHHHhhcccccCCEEEEecCCCCceEEEEEecCCccccccccccccccccccccccccccccccccccc
Confidence               124699999999999999999999999999999999999997520                                


Q ss_pred             ------------------------CCCCeEEEEcCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCCccccccccccCCC
Q 008833          425 ------------------------ESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPR  480 (552)
Q Consensus       425 ------------------------e~~p~I~~~DSL~~~~~~~i~~~l~~yL~~E~~~k~~~~~~~d~pi~~~~w~~vP~  480 (552)
                                              .+.|||+|||||+++.+..++..|++||..||+.+.+....++..-.....+.+|+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~k~pcIl~lDSL~~~~~~~~~~~Lr~YL~~E~~~k~~~~~~f~~~~~~~~~~~~P~  258 (323)
T 3eay_A          179 TSTLSLSAEDSQSTESNMSVPKKMCKRPCILILDSLKAASVQNTVQNLREYLEVEWEVKLKTHRQFSKTNMVDLCPKVPK  258 (323)
T ss_dssp             ---------------------CCCCBCSEEEEECSSCCSSHHHHHHHHHHHHHHHHHHHHSSCCCCCTTTSCEECCBCCC
T ss_pred             ccccccccccccccccccccccccCCCCeEEEEECCCCCCcchHHHHHHHHHHHHHHhhcCCCcCCCHhHceeccCCCCC
Confidence                                    13579999999999876789999999999999988654322221110112357999


Q ss_pred             ccCCCchhhhhhcccccc-----cCCCCCcccccccCHHHHHHHHHHHHHHHHHHHhhhc
Q 008833          481 RIDDRIIPRFMEEAPERL-----KKKDLAMFGKRWFRPEEASGLRIKIRNLLKKQFQISS  535 (552)
Q Consensus       481 Q~N~~Dcg~Fi~~~PqQ~-----n~~DCGvF~~~wF~~edi~~lR~~I~~LIl~L~~~~~  535 (552)
                      |.|++|||.|++.+.+.+     ..++-.|+...||++++|..+|..|++||++|.....
T Consensus       259 Q~N~~DCGvfvl~~~e~~~~~~~~~f~~~~~~~~wf~~~~i~~kR~ei~~LI~~L~~~q~  318 (323)
T 3eay_A          259 QDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKLHLQQQ  318 (323)
T ss_dssp             CCSTTCHHHHHHHHHHHHHHSCCCCCCSSCBCTTSSCHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCcHHHHHHHHHHHHHhCCccccccccccccCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999998654332     2233457778999999999999999999999986653
>1th0_A SMT3-, sentrin-specific protease 2; SUMO, AXAM, SENP, ULP, cell cycle, hydrolase; 2.20A {Homo sapiens} SCOP: d.3.1.7 PDB: 1tgz_A 2io0_A 2io1_A 2io2_A 2io3_A Back     alignment and structure
>2xph_A Sentrin-specific protease 1; hydrolase, cysteine protease, thiol protease; 2.40A {Homo sapiens} PDB: 2xre_A 2iyc_A 2iyd_A 2iy1_A 2iy0_A 2ckg_A 2ckh_A 2g4d_A Back     alignment and structure
>1euv_A ULP1 protease; SUMO hydrolase, ubiquitin-like protease 1, SMT3 hydrolase desumoylating enzyme, cysteine protease; 1.60A {Saccharomyces cerevisiae} SCOP: d.3.1.7 PDB: 2hkp_A 2hl8_A 2hl9_A Back     alignment and structure
>2bkr_A Sentrin-specific protease 8; protein-binding-hydrolase complex, ubiquitin, hydrolase, Pro thiol protease, UBL conjugation pathway, ubiquitin/hydrolas complex; 1.90A {Homo sapiens} SCOP: d.3.1.7 PDB: 2bkq_A 1xt9_A Back     alignment and structure
>2oix_A Xanthomonas outer protein D; CLAN CE family 48 cysteine protease, type III secreted effec desumoylating enzyme; 1.80A {Xanthomonas euvesicatoria} PDB: 2oiv_A Back     alignment and structure
>2oix_A Xanthomonas outer protein D; CLAN CE family 48 cysteine protease, type III secreted effec desumoylating enzyme; 1.80A {Xanthomonas euvesicatoria} PDB: 2oiv_A Back     alignment and structure
>2bkr_A Sentrin-specific protease 8; protein-binding-hydrolase complex, ubiquitin, hydrolase, Pro thiol protease, UBL conjugation pathway, ubiquitin/hydrolas complex; 1.90A {Homo sapiens} SCOP: d.3.1.7 PDB: 2bkq_A 1xt9_A Back     alignment and structure
>1th0_A SMT3-, sentrin-specific protease 2; SUMO, AXAM, SENP, ULP, cell cycle, hydrolase; 2.20A {Homo sapiens} SCOP: d.3.1.7 PDB: 1tgz_A 2io0_A 2io1_A 2io2_A 2io3_A Back     alignment and structure
>1euv_A ULP1 protease; SUMO hydrolase, ubiquitin-like protease 1, SMT3 hydrolase desumoylating enzyme, cysteine protease; 1.60A {Saccharomyces cerevisiae} SCOP: d.3.1.7 PDB: 2hkp_A 2hl8_A 2hl9_A Back     alignment and structure
>2xph_A Sentrin-specific protease 1; hydrolase, cysteine protease, thiol protease; 2.40A {Homo sapiens} PDB: 2xre_A 2iyc_A 2iyd_A 2iy1_A 2iy0_A 2ckg_A 2ckh_A 2g4d_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 552
d1th0a_226 d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {H 6e-20
d2iy1a1225 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {H 1e-19
d2bkra1212 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SEN 2e-17
d1euva_221 d.3.1.7 (A:) Ulp1 protease C-terminal domain {Bake 4e-15
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 226 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Adenain-like
domain: Sentrin-specific protease 2, SENP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 6e-20
 Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 28/208 (13%)

Query: 311 VDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLK 370
                + I   DI  L    +L   ++NFY+  L  +           H F+T+FY KLK
Sbjct: 27  SSAFKLRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYP--ALHVFSTFFYPKLK 84

Query: 371 EAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPII 430
                        +   +RW KGVN+F++  +L+PIH  VHWSLV+I +  K       +
Sbjct: 85  SG----------GYQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVIDLRKKC------L 128

Query: 431 LHLDSLKLHCSLSIFSNIRSFLKEEWN-YLKQEVSPSDLPIAERIWQHLPRRIDD----- 484
            +LDS+       I   +  +L++E       +++  +          +P++++      
Sbjct: 129 KYLDSMG-QKGHRICEILLQYLQDESKTKRNSDLNLLEWTHHSMKPHEIPQQLNGSDCGM 187

Query: 485 ---RIIPRFMEEAPERLKKKDLAMFGKR 509
              +       + P    +  + +F K+
Sbjct: 188 FTCKYADYISRDKPITFTQHQMPLFRKK 215
>d2iy1a1 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 225 Back     information, alignment and structure
>d2bkra1 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SENP8 {Human (Homo sapiens) [TaxId: 9606]} Length = 212 Back     information, alignment and structure
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query552
d1euva_221 Ulp1 protease C-terminal domain {Baker's yeast (Sa 100.0
d1th0a_226 Sentrin-specific protease 2, SENP2 {Human (Homo sa 99.98
d2iy1a1225 Sentrin-specific protease 1 {Human (Homo sapiens) 99.98
d2bkra1212 Sentrin-specific protease 8, SENP8 {Human (Homo sa 99.97
d2bkra1212 Sentrin-specific protease 8, SENP8 {Human (Homo sa 87.92
d2iy1a1225 Sentrin-specific protease 1 {Human (Homo sapiens) 85.4
d1th0a_226 Sentrin-specific protease 2, SENP2 {Human (Homo sa 83.28
d1euva_221 Ulp1 protease C-terminal domain {Baker's yeast (Sa 82.45
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Adenain-like
domain: Ulp1 protease C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-32  Score=266.41  Aligned_cols=206  Identities=21%  Similarity=0.352  Sum_probs=159.8

Q ss_pred             CCccchHHHHHHHHhhccce--eecCCCCCCCCeEEecchhcccCCCCCcCHHHHHHHHHHHHHhcCCCCcCCCcEEEEc
Q 008833          285 LHIETTEQADEFAECMIDAK--IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFN  362 (552)
Q Consensus       285 ~~~~~~e~~~~~~~~~~~~~--i~yp~~~~~~~i~Lt~~DL~~L~p~~WLND~IInFYl~~L~~~~~~~~~~~~~v~~fn  362 (552)
                      +|..+++...++...+....  ...    ...+++|+.+|+.+|.|++||||+|||||++||....       .++|+|+
T Consensus         4 ~~~lt~~~~~~~~~~l~~~~~~~~~----~~~~~~it~~Dl~~L~~~~WLnD~iIn~y~~~l~~~~-------~~~~~~~   72 (221)
T d1euva_           4 VPELNEKDDDQVQKALASRENTQLM----NRDNIEITVRDFKTLAPRRWLNDTIIEFFMKYIEKST-------PNTVAFN   72 (221)
T ss_dssp             SCCCCHHHHHHHHHHHTCSSCCEEE----EETTEEEEHHHHGGGSTTCCCBHHHHHHHHHHHHHHS-------TTEEECC
T ss_pred             CCCCCHHHHHHHHHHHcCCCCceee----ecCCcEEeHHHHhhcCCCcccCcHHHHHHHHHHHhcC-------CCeEEec
Confidence            34577777888887775311  111    2478999999999999999999999999999998764       5789999


Q ss_pred             hhhHHHHHHhhhcCCCCchhhhHHHhhhh--ccccccccceEEEeeec-CcceEEEEEEcCCCCCCCCCeEEEEcCCCCC
Q 008833          363 TYFYSKLKEAVSHKGGDKDSFFIKFRRWW--KGVNIFQKSYVLIPIHE-DVHWSLVIICIPDKEDESGPIILHLDSLKLH  439 (552)
Q Consensus       363 TfFy~kL~~~~~~kg~d~~~~y~~VkrWt--k~~dLfekd~IfIPIn~-~~HWsLvVI~~p~k~~e~~p~I~~~DSL~~~  439 (552)
                      ||||.+|.+.          +|..+++|+  ++.+++.+++||||||. +.||+|+||+.+.+      +|+|||||++.
T Consensus        73 s~f~~~l~~~----------~~~~~~~w~~~~~~~~~~~~~i~iPin~~~~HW~l~vi~~~~~------~i~~~DSl~~~  136 (221)
T d1euva_          73 SFFYTNLSER----------GYQGVRRWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKK------TIGYVDSLSNG  136 (221)
T ss_dssp             THHHHHHHHH----------TGGGTTTTTGGGTSCGGGCSEEEEEEEETTTEEEEEEEETTTT------EEEEECSSCCS
T ss_pred             cHHHHhHhhh----------chHHHHHHHHhcccchhhcceeEeeEecccceEEEEEeecccc------ceeeeccccCC
Confidence            9999999874          478899998  56799999999999996 58999999999987      99999999876


Q ss_pred             CCh---hHHHHHHHHHHHHHHhhhccCCCCCccccccccccCCCccCCCchhhhhhcccccccCCCCCcccccccCHHHH
Q 008833          440 CSL---SIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPRFMEEAPERLKKKDLAMFGKRWFRPEEA  516 (552)
Q Consensus       440 ~~~---~i~~~l~~yL~~E~~~k~~~~~~~d~pi~~~~w~~vP~Q~N~~Dcg~Fi~~~PqQ~n~~DCGvF~~~wF~~edi  516 (552)
                      +..   .++..|++||..+++.+.    ..++++.   ...+|+|.|++|||.|+....+.+...     ....|++.+|
T Consensus       137 ~~~~~~~i~~~l~~~l~~~~~~~~----~~~~~~~---~~~~PqQ~N~~DCGvfvl~~~~~~~~~-----~~~~~~q~d~  204 (221)
T d1euva_         137 PNAMSFAILTDLQKYVMEESKHTI----GEDFDLI---HLDCPQQPNGYDCGIYVCMNTLYGSAD-----APLDFDYKDA  204 (221)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTSSS----CTTCEEE---EECCCCCSSSSTHHHHHHHHHHHHHTT-----CCCCCCHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhhc----CCCCeee---eccCCCCCCCCChHHHHHHHHHHHhCC-----CCCccCHHHH
Confidence            643   367778888877765432    2233321   235688888888888887655444321     1235999999


Q ss_pred             HHHHHHHHHHHHH
Q 008833          517 SGLRIKIRNLLKK  529 (552)
Q Consensus       517 ~~lR~~I~~LIl~  529 (552)
                      +.+|+.|..+|+.
T Consensus       205 ~~~R~~i~~~il~  217 (221)
T d1euva_         205 IRMRRFIAHLILT  217 (221)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988874
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2iy1a1 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bkra1 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SENP8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bkra1 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SENP8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2iy1a1 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure