Citrus Sinensis ID: 008840
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 551 | 2.2.26 [Sep-21-2011] | |||||||
| P07788 | 513 | Spore coat protein A OS=B | yes | no | 0.865 | 0.929 | 0.387 | 1e-85 | |
| Q53692 | 643 | Phenoxazinone synthase OS | N/A | no | 0.829 | 0.710 | 0.260 | 2e-33 | |
| Q12737 | 572 | Bilirubin oxidase OS=Myro | N/A | no | 0.707 | 0.681 | 0.281 | 1e-28 | |
| Q69HT9 | 447 | Multicopper oxidase mco O | yes | no | 0.613 | 0.756 | 0.243 | 1e-18 | |
| Q6GIX3 | 447 | Multicopper oxidase mco O | yes | no | 0.613 | 0.756 | 0.241 | 4e-18 | |
| Q8CQF6 | 447 | Multicopper oxidase mco O | yes | no | 0.606 | 0.747 | 0.229 | 2e-17 | |
| Q4LAB0 | 447 | Multicopper oxidase mco O | yes | no | 0.606 | 0.747 | 0.231 | 2e-17 | |
| Q7CGI0 | 474 | Cell division protein Fts | yes | no | 0.401 | 0.466 | 0.284 | 4e-13 | |
| D3VCR0 | 473 | Cell division protein Fts | yes | no | 0.299 | 0.348 | 0.314 | 8e-13 | |
| Q2NWC3 | 473 | Cell division protein Fts | yes | no | 0.402 | 0.469 | 0.277 | 8e-12 |
| >sp|P07788|COTA_BACSU Spore coat protein A OS=Bacillus subtilis (strain 168) GN=cotA PE=1 SV=4 | Back alignment and function desciption |
|---|
Score = 317 bits (812), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 278/545 (51%), Gaps = 68/545 (12%)
Query: 36 LKLEMFVDELP--------DMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVF 87
+ LE FVD LP K K YY E+ M E + HRDLPPT ++
Sbjct: 1 MTLEKFVDALPIPDTLKPVQQSKEKTYY-----------EVTMEECTHQLHRDLPPTRLW 49
Query: 88 AFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKK-GVPTVV 146
+ PGPTIE + YV W N+LP H LPID TI + +++ V TVV
Sbjct: 50 GY-----NGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVV 104
Query: 147 HLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNL 206
HLHGG+ +SDGY ++WF+ FE+ GP + E YHY N Q+ WYHDH M LTR+N+
Sbjct: 105 HLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNV 164
Query: 207 LAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPS---IHP 263
AGL+GAYI+ P E L+LPS D +D PL + DR +GS++ S NPS +P
Sbjct: 165 YAGLVGAYIIHDPK-EKRLKLPS-DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNP 222
Query: 264 QWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAY 323
P + G+ I+VNGK WP + V RKYRFR+INASN R + NG FI +GSD
Sbjct: 223 SIVPAFCGETILVNGKVWPYLEVEPRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGL 282
Query: 324 LGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAG--NPVNDANGKVMKF 381
L + V N LAPAE D++IDF+ + ILAN A G NP DAN +M+F
Sbjct: 283 LPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGC---GGDVNPETDAN--IMQF 337
Query: 382 IILKN-RETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDP 440
+ K + D R P+ L YPS R + + G+P LL+N K DP
Sbjct: 338 RVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQDEYGRPV-LLLNNKRWHDP 396
Query: 441 VTETPKTLDQTEL--------------VNLEEFKACMNKINDAIKCNLSKHACGKKQAV- 485
VTETPK + TE+ ++L F+ + D + S AV
Sbjct: 397 VTETPK-VGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVP 455
Query: 486 -PVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMM 544
P E+GWK+ + G V RI F P+ YV+HCHIL+HED MM
Sbjct: 456 PPPSEKGWKDTIQAHAGEVLRIAATFG--------PYSGR----YVWHCHILEHEDYDMM 503
Query: 545 RPLKL 549
RP+ +
Sbjct: 504 RPMDI 508
|
Involved in brown pigmentation during sporogenesis. Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|Q53692|PHSA_STRAT Phenoxazinone synthase OS=Streptomyces antibioticus GN=phsA PE=1 SV=3 | Back alignment and function description |
|---|
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 153/588 (26%), Positives = 231/588 (39%), Gaps = 131/588 (22%)
Query: 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNH 123
++ EI + + H LPPT ++ + VPGPTIE G + W N +P
Sbjct: 64 RETEIALRPTWVRLHPQLPPTLMWGY-----DGQVPGPTIEVRRGQRVRIAWTNRIPKGS 118
Query: 124 ILPID----PTIPTAMPS-----NKKGVP-----------TVVHLHGGIDEPESDGYAKS 163
P+ P P P+ + GV +V HLHG +DG+A +
Sbjct: 119 EYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTGGGNDGWADN 178
Query: 164 WFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA 223
GF + + Y N Q WYHDH M +TR N++AGL G Y++R D E
Sbjct: 179 --AVGFGDA------QLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRD-DEED 229
Query: 224 PLRLPSGDVFDRPLFVFDRNFLTNGSIYMNS---------TGNNPSIHPQWQPEYFGDVI 274
L LPSGD + PL + DRN T+ +N +NP +FG
Sbjct: 230 ALGLPSGD-REIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYT 288
Query: 275 VVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLR-----FIH-VGSDSAYLGKPV 328
VNG+ WP V YR R++NASNAR + + +H +GSD L +PV
Sbjct: 289 TVNGRIWPYADVDDGWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPV 348
Query: 329 VTN--DTV----LAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANG-----K 377
+ DT+ APAE D+++DF L + P PAG P D G +
Sbjct: 349 PVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPG-APAGTP--DPLGGVRYPE 405
Query: 378 VMKFIILKNRETDPWRVPE----------------------------------KLIEYPS 403
VM+F + + E D + +PE ++ E
Sbjct: 406 VMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAE 465
Query: 404 ADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPV--TETPKTLDQTELVNLE---- 457
+ A + + T G+ A T D + T T +Q +NL
Sbjct: 466 VEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFNDGLGFTIGEGTHEQWTFLNLSPILH 525
Query: 458 -------EFKACMNKINDAIKCNLSKHAC------GKKQAVPV--HEQGWKNVYKITPGY 502
+F+ DA +L+ VP+ +E G K+V+++
Sbjct: 526 PMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQ 585
Query: 503 VTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLI 550
R++ +F + ++YHCH+L+HED MMRP ++
Sbjct: 586 GLRVMGKFDGAYGR------------FMYHCHLLEHEDMGMMRPFVVM 621
|
Catalyzes the last but two steps in the putative biosynthetic pathway of actinomycin. Streptomyces antibioticus (taxid: 1890) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q12737|BLRO_MYRVE Bilirubin oxidase OS=Myrothecium verrucaria PE=1 SV=1 | Back alignment and function description |
|---|
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 191/458 (41%), Gaps = 68/458 (14%)
Query: 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESD 158
PGPT + G++T V + N P VHLHG D
Sbjct: 105 PGPTFQVPRGVETVVRF---------------------INNAEAPNSVHLHGSFSRAAFD 143
Query: 159 GYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218
G+A+ G + + Y+Y N Q WYHDH M +T N G G Y+L
Sbjct: 144 GWAEDITEPG--------SFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTD 195
Query: 219 PDVEAPLRLPSG-DVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVN 277
P E L LPSG FD P+ + + + NG++ + N ++GDVI VN
Sbjct: 196 P-AEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTNGELN---------SFWGDVIHVN 245
Query: 278 GKAWPRMTVRRRKYRFRIINASNARFFRFFFTNG------LRFIHVGSDSAYLGKPVVTN 331
G+ WP V RKYRFR ++A+ +R F +F + L F + SDS L P T+
Sbjct: 246 GQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTS 305
Query: 332 DTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVN-DANGKVMKFIILKN-RET 389
++ AE +VV DFS+ L N G + D KVM+F++ + +
Sbjct: 306 LLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQP 365
Query: 390 DPWRVPEKL--IEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPVTETPKT 447
D VP L + +PS + R+ + G + N PV T
Sbjct: 366 DTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPV----GT 421
Query: 448 LDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRIL 507
+++ EL+N I+ +S+ + + V +E G K+V + G ++
Sbjct: 422 VERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWL--GRRETVV 479
Query: 508 VRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMM 544
V Y PF PG Y++HCH L HED+ MM
Sbjct: 480 VEAHYA------PF-----PGVYMFHCHNLIHEDHDMM 506
|
Oxidation of bilirubin and other tetrapyrroles. Myrothecium verrucaria (taxid: 5532) EC: 1 EC: . EC: 3 EC: . EC: 3 EC: . EC: 5 |
| >sp|Q69HT9|MCO_STAAU Multicopper oxidase mco OS=Staphylococcus aureus GN=mco PE=1 SV=2 | Back alignment and function description |
|---|
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 162/414 (39%), Gaps = 76/414 (18%)
Query: 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTR 203
T H HG + + DG G E+ T + Q+ WYH H T
Sbjct: 104 TTFHWHGLEIDGKVDGGPSQVIKPGKEK--------TIKFEVKQEAATLWYHPHPSPNTA 155
Query: 204 VNLLAGLIGA-YILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIH 262
+ GL G YI P D+ P+ + D+ F+ S +N T
Sbjct: 156 KQVYNGLSGLLYIEDDKKNNYPSNYGKNDL---PIIIQDKTFV---SKKLNYTKTKDEDG 209
Query: 263 PQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSA 322
Q GD ++VNGK P++T + K R R++N SNAR +N F ++ S+
Sbjct: 210 TQ------GDTVLVNGKVDPKLTTKEGKIRLRLLNGSNARDLNLKLSNNQSFEYIASEGG 263
Query: 323 YLGKPVVTNDTVLAPAEIADVVIDFSESTSD-VAILANDAPYPYPAGNPVNDANGKVMKF 381
+L K + LAP+ ++VID S+ D V ++ ND P
Sbjct: 264 HLEKTKKLKEINLAPSARKEIVIDLSKMKEDKVNLVDNDETVILP--------------- 308
Query: 382 IILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPV 441
II K + T+ P+ + I + G ++ IN K +
Sbjct: 309 IINKEKSTNKDTTPK--------------VDKKIKL------EGMDDNVTINGKKFDPNR 348
Query: 442 TETPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHAC----GKKQAVPVHEQGWKNVYK 497
+ + +++ E +E K M+ + + ++ GKK + + +G K+V
Sbjct: 349 IDFTQKVNRKETWEIENVKDKMSGMKHPFHIHGTQFKVLSVDGKKPSEDM--RGKKDVIS 406
Query: 498 ITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLIK 551
+ PG +I V F Y++HCHIL+HEDN MM +K+ K
Sbjct: 407 LEPGQKAKIEVVFKNTGT-------------YMFHCHILEHEDNGMMGQIKVTK 447
|
May be involved in copper homeostasis and oxidative stress response. Oxidizes the substrate 3,3'-dimethoxybenzidine in vitro. Also possesses low levels of phenoloxidase and ferroxidase activities. Staphylococcus aureus (taxid: 1280) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q6GIX3|MCO_STAAR Multicopper oxidase mco OS=Staphylococcus aureus (strain MRSA252) GN=mco PE=3 SV=2 | Back alignment and function description |
|---|
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 162/414 (39%), Gaps = 76/414 (18%)
Query: 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTR 203
T H HG + + DG G E+ T + Q+ WYH H T
Sbjct: 104 TTFHWHGLEIDGKVDGGPSQVIKPGKEK--------TIKFEVKQEAATLWYHPHPSPNTA 155
Query: 204 VNLLAGLIGA-YILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIH 262
+ GL G YI P D+ P+ + D+ F+ S +N T
Sbjct: 156 KQVYNGLSGLLYIEDDKKNNYPSNYGKNDL---PIIIQDKTFV---SKKLNYTKTKDEDG 209
Query: 263 PQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSA 322
Q GD ++VNGK P++T + K R R++N SNAR +N F ++ S+
Sbjct: 210 TQ------GDTVLVNGKVDPKLTTKEGKIRLRLLNGSNARDLNLKLSNNQSFEYIASEGG 263
Query: 323 YLGKPVVTNDTVLAPAEIADVVIDFSESTSD-VAILANDAPYPYPAGNPVNDANGKVMKF 381
+L K + LAP+ ++VID S+ + V ++ ND P
Sbjct: 264 HLEKTKKLKEINLAPSARKEIVIDLSKMKEEKVNLVDNDETVILP--------------- 308
Query: 382 IILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPV 441
II K + T+ P+ + I + G ++ IN K +
Sbjct: 309 IINKEKSTNKDTTPK--------------VDKKIKL------EGMDDNVTINGKKFDPNR 348
Query: 442 TETPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHAC----GKKQAVPVHEQGWKNVYK 497
+ + +++ E +E K M+ + + ++ GKK + + +G K+V
Sbjct: 349 IDFTQKVNRKETWEIENVKDKMSGMKHPFHIHGTQFKVLSVDGKKPSEDM--RGKKDVIS 406
Query: 498 ITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLIK 551
+ PG +I V F Y++HCHIL+HEDN MM +K+ K
Sbjct: 407 LEPGQKAKIEVVFKNTGT-------------YMFHCHILEHEDNGMMGQIKVTK 447
|
May be involved in copper homeostasis and oxidative stress response. Staphylococcus aureus (strain MRSA252) (taxid: 282458) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q8CQF6|MCO_STAES Multicopper oxidase mco OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mco PE=3 SV=2 | Back alignment and function description |
|---|
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 154/414 (37%), Gaps = 80/414 (19%)
Query: 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTR 203
T H HG + DG G E+ T + Q WYH H T
Sbjct: 104 TTFHWHGLEINGKVDGGPSQVIKPGKEK--------TIKFEVNQDSATLWYHPHPSPNTA 155
Query: 204 VNLLAGLIGA-YILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIH 262
+ GL G YI P D+ P+ + D+ F++ Y + + +
Sbjct: 156 KQVYNGLSGLLYIEDSKKNNYPSNYGKNDL---PIIIQDKTFVSKKLNYSKTKDEDGTQ- 211
Query: 263 PQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSA 322
GD ++VNG P++T + K R R++N SNAR +N F ++ SD
Sbjct: 212 --------GDTVLVNGIVNPKLTAKEEKIRLRLLNGSNARDLNLKLSNNQSFEYIASDGG 263
Query: 323 YLGKPVVTNDTVLAPAEIADVVIDFSESTSD-VAILANDAPYPYPAGNPVNDANGKVMKF 381
L + LAP+E ++VID S+ + ++++ ND P N
Sbjct: 264 QLKNAKKLKEINLAPSERKEIVIDLSKMKGEKISLVDNDKTVILPISN------------ 311
Query: 382 IILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPV 441
K + ++ P+ ++ I + G H+ IN +
Sbjct: 312 ---KEKSSNKGNTPK--------------VSKKIKL------EGMNDHVTINGNKFDPNR 348
Query: 442 TETPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKK------QAVPVHEQGWKNV 495
+ + L+Q E+ +E K M +K H K + P +G K+V
Sbjct: 349 IDFTQKLNQKEVWEIENVKDKMG----GMKHPFHIHGTQFKVLSVDGEKPPKDMRGKKDV 404
Query: 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKL 549
+ PG +I V F Y++HCHIL+HE+N MM +K+
Sbjct: 405 ISLEPGQKAKIEVVFKNTGT-------------YMFHCHILEHEENGMMGQIKV 445
|
May be involved in copper homeostasis and oxidative stress response. Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q4LAB0|MCO_STAHJ Multicopper oxidase mco OS=Staphylococcus haemolyticus (strain JCSC1435) GN=mco PE=3 SV=2 | Back alignment and function description |
|---|
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 151/414 (36%), Gaps = 80/414 (19%)
Query: 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTR 203
T H HG + DG G E+ T + Q WYH H T
Sbjct: 104 TTFHWHGLEVNGKVDGGPSQVIKPGKEK--------TIKFEVNQDSATLWYHPHPSPNTA 155
Query: 204 VNLLAGLIGA-YILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIH 262
+ GL G YI P D+ P+ + D+ F++ Y + + +
Sbjct: 156 KQVYNGLSGLLYIEDSKKNNYPSNYGKNDL---PIIIQDKTFVSKKLNYSKTKDEDGTQ- 211
Query: 263 PQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSA 322
GD ++VNG P++T + K R R++N SNAR +N F ++ SD
Sbjct: 212 --------GDTVLVNGIVNPKLTAKEEKIRLRLLNGSNARDLNLKLSNNQSFEYIASDGG 263
Query: 323 YLGKPVVTNDTVLAPAEIADVVIDFSESTSD-VAILANDAPYPYPAGNPVNDANGKVMKF 381
L + LAP+E ++VID S+ + V+++ ND P N
Sbjct: 264 QLKNAKKLKEINLAPSERKEIVIDLSKMKGEKVSLVDNDKTVILPISNK----------- 312
Query: 382 IILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPV 441
E S + ++ I + G ++ IN +
Sbjct: 313 ------------------EKSSNKSNTPKVSKKIKL------EGMNDNVTINGNKFDPNR 348
Query: 442 TETPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKK------QAVPVHEQGWKNV 495
+ + L+Q E+ +E K M +K H K + P +G K+V
Sbjct: 349 IDFTQKLNQKEVWEIENVKDKMG----GMKHPFHIHGTQFKVLSVDGEKPPKDMRGKKDV 404
Query: 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKL 549
+ PG +I V F Y++HCHIL+HEDN MM +K+
Sbjct: 405 ISLEPGQKAKIEVVFKNTGT-------------YMFHCHILEHEDNGMMGQIKV 445
|
May be involved in copper homeostasis and oxidative stress response. Staphylococcus haemolyticus (strain JCSC1435) (taxid: 279808) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q7CGI0|FTSP_YERPE Cell division protein FtsP OS=Yersinia pestis GN=ftsP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 112/264 (42%), Gaps = 43/264 (16%)
Query: 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDG 159
GPT+ +G D + + N L T P +M + VP L GG
Sbjct: 77 GPTVRVFNGDDVKLIYSNRL----------TEPVSMTISGLQVPGT--LMGG-------- 116
Query: 160 YAKSWFTAGFEEKGPTWTNETYHYHNMQQPG-NTWYHDHTMGLTRVNLLAGLIGAYILRH 218
A G W+ ++QP N WYH +T ++ GL G +++
Sbjct: 117 ------EARMIRPGEDWS----PVLPVRQPAANCWYHANTPNRMAPHVYNGLAGMWLVED 166
Query: 219 PDVEAPLRLPSG-DVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVN 277
V + LPS V D PL + D+ G P +P + + GD ++VN
Sbjct: 167 A-VSKAMPLPSHYGVDDFPLIIQDKRLDNFGV---------PEYNPPAKGGFVGDTLLVN 216
Query: 278 GKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAP 337
G P + V R R R++NASNAR + ++G V SD +L PV LAP
Sbjct: 217 GAQSPFVEVSRGWVRLRLLNASNARRYTLQLSDGRPLYVVASDQGFLPAPVAVQQLSLAP 276
Query: 338 AEIADVVIDFSESTSDVAILANDA 361
E +VVID S+ ++V+I A ++
Sbjct: 277 GERREVVIDMSQG-NEVSITAGES 299
|
Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. Yersinia pestis (taxid: 632) |
| >sp|D3VCR0|FTSP_XENNA Cell division protein FtsP OS=Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) GN=ftsP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 186 MQQPGNT-WYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSG-DVFDRPLFVFDRN 243
+ QP T WYH +T T ++ AGL G ++ D L LP V D P+ + D+
Sbjct: 133 INQPAATCWYHANTPNRTAQHVYAGLAGMCLVEDEDSRR-LPLPKHYGVDDFPVILQDKR 191
Query: 244 FLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARF 303
G P P + GD ++VNG P + V R R R++NASNAR
Sbjct: 192 LDNFGV---------PQYDPPANQGFLGDTLIVNGVENPFVEVARGWVRLRLLNASNARR 242
Query: 304 FRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361
++ ++G F +G+D L PV LAP E +V++D S+ +V+I A ++
Sbjct: 243 YQLQLSDGRPFYMIGTDQGLLPAPVAVQQLPLAPGERREVLVDMSK-VENVSITAGES 299
|
Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) (taxid: 406817) |
| >sp|Q2NWC3|FTSP_SODGM Cell division protein FtsP OS=Sodalis glossinidius (strain morsitans) GN=ftsP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 107/263 (40%), Gaps = 41/263 (15%)
Query: 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDG 159
GPT+ +G D + + N L T P AM + VP L GG
Sbjct: 76 GPTVRVYNGDDVNIIYNNRL----------TEPVAMTVSGLQVPGT--LMGG-------- 115
Query: 160 YAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP 219
A G W+ Q G WYH +T ++ GL G +++
Sbjct: 116 ------AARMMSPGADWSPV---LPIRQTAGTCWYHANTPNRMAPHIYNGLAGLWLVEDA 166
Query: 220 DVEAPLRLPSG-DVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNG 278
V L LP+ V D PL + D+ G P +P + GD ++VNG
Sbjct: 167 -VSKVLPLPNHYGVDDFPLIIQDKRLDNFG---------QPVYNPPASGGFLGDTLLVNG 216
Query: 279 KAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPA 338
P + V R R R++NASN+R ++ ++G V D +L PV LAP
Sbjct: 217 AQSPFVEVSRGWVRLRLLNASNSRCYQLQLSDGRAMHVVAGDQGFLPAPVPVIRLSLAPG 276
Query: 339 EIADVVIDFSESTSDVAILANDA 361
E +++ID S+ +VAI A +A
Sbjct: 277 ERREILIDMSKG-EEVAITAGEA 298
|
Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. Sodalis glossinidius (strain morsitans) (taxid: 343509) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 551 | ||||||
| 255580487 | 575 | spore coat protein, putative [Ricinus co | 0.994 | 0.953 | 0.688 | 0.0 | |
| 224111534 | 573 | predicted protein [Populus trichocarpa] | 0.989 | 0.951 | 0.695 | 0.0 | |
| 225424189 | 577 | PREDICTED: spore coat protein A [Vitis v | 0.998 | 0.953 | 0.686 | 0.0 | |
| 297737720 | 654 | unnamed protein product [Vitis vinifera] | 0.998 | 0.840 | 0.686 | 0.0 | |
| 359472883 | 577 | PREDICTED: spore coat protein A-like [Vi | 0.998 | 0.953 | 0.686 | 0.0 | |
| 147845689 | 573 | hypothetical protein VITISV_028234 [Viti | 0.990 | 0.952 | 0.678 | 0.0 | |
| 449463507 | 565 | PREDICTED: spore coat protein A-like [Cu | 0.963 | 0.939 | 0.674 | 0.0 | |
| 356575650 | 575 | PREDICTED: spore coat protein A-like [Gl | 0.958 | 0.918 | 0.663 | 0.0 | |
| 356534315 | 575 | PREDICTED: spore coat protein A-like [Gl | 0.980 | 0.939 | 0.645 | 0.0 | |
| 26451035 | 581 | unknown protein [Arabidopsis thaliana] g | 0.987 | 0.936 | 0.634 | 0.0 |
| >gi|255580487|ref|XP_002531069.1| spore coat protein, putative [Ricinus communis] gi|223529364|gb|EEF31330.1| spore coat protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/575 (68%), Positives = 462/575 (80%), Gaps = 27/575 (4%)
Query: 4 MERILVIHLMFFALSRVVVNSAATTGGGLINPLKLEMFVDELPDMPKIKGYYAANGVVKP 63
M+R L++ L ++V + LIN KLEMFVDEL DMPKI G+ NGV KP
Sbjct: 1 MDRALLLFFHVLCLYLLLVITTTRAEDKLINLTKLEMFVDELLDMPKIPGFDVVNGVFKP 60
Query: 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNH 123
K+L IGMF+K+WKFHR+LPPTPVFA+G S A+VPGPTIEA+HG+DT+VTW+NHLP H
Sbjct: 61 KRLRIGMFKKEWKFHRNLPPTPVFAYGVSRQNATVPGPTIEAIHGVDTFVTWKNHLPSKH 120
Query: 124 ILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHY 183
ILP DPTIPTA+PS KKG+PTVVHLHG I EPESDG+A+SWFT F+EKGPTWT +TYHY
Sbjct: 121 ILPWDPTIPTAIPSTKKGIPTVVHLHGSIGEPESDGHAESWFTNRFQEKGPTWTKKTYHY 180
Query: 184 HNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRN 243
N QQPGN WYHDH MGLTRVNLLAGL+GAYI+RHPDVEA LRLP GD FDR L VFDR+
Sbjct: 181 LNFQQPGNLWYHDHAMGLTRVNLLAGLVGAYIIRHPDVEASLRLPYGDEFDRTLVVFDRS 240
Query: 244 FLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARF 303
F T+GS+YM+STGNNPSIHPQWQPEYFGD I+VNGKAWPR+ VRRRKYRFRIINASNARF
Sbjct: 241 FRTDGSLYMSSTGNNPSIHPQWQPEYFGDAIIVNGKAWPRLIVRRRKYRFRIINASNARF 300
Query: 304 FRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPY 363
FRFFFTNGLRFIHV +DS YL +PVVT+ T+LAP+EIADVV+DFS+S SD ILANDAPY
Sbjct: 301 FRFFFTNGLRFIHVAADSVYLEEPVVTDRTLLAPSEIADVVVDFSKSKSDTVILANDAPY 360
Query: 364 PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSN 423
PYP+G+ VN+ NGKVMKFII K+ E D W+VP+KLI+YPS L +AS RYIAMYEYTSN
Sbjct: 361 PYPSGDLVNEVNGKVMKFIIKKDHEVDTWKVPKKLIKYPSPKLFSASQIRYIAMYEYTSN 420
Query: 424 TGKPTHLLINAKTLEDPVTETPK---------------------------TLDQTELVNL 456
+PTHL IN K+ ++ VTETPK ++ T L+N+
Sbjct: 421 IDEPTHLYINGKSYDELVTETPKEGTTEIWNVINLTEDNHPLHIHLGLFVVMEHTGLINV 480
Query: 457 EEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHAN 516
EEFKACM+K+NDAIKC + K+A GKK VP HE+GWKNVYK+TPGYVT+ILVRF+Y+H+N
Sbjct: 481 EEFKACMSKLNDAIKCKIDKYARGKKLEVPAHEKGWKNVYKMTPGYVTKILVRFAYIHSN 540
Query: 517 ASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLIK 551
SY FDATAEPGYVYHCHILDHEDN+MMRPLKLI+
Sbjct: 541 VSYAFDATAEPGYVYHCHILDHEDNVMMRPLKLIR 575
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224111534|ref|XP_002315892.1| predicted protein [Populus trichocarpa] gi|222864932|gb|EEF02063.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/574 (69%), Positives = 461/574 (80%), Gaps = 29/574 (5%)
Query: 4 MERILVIHLMFFALSRVVVNSAATTGGGLINPLKLEMFVDELPDMPKIKGYYAANGVVKP 63
MERILV ++ F L+ ++V LI+P KLE FVDELPDMPKI+ + NGV K
Sbjct: 1 MERILVFNI--FCLALLIVLPTIWAEDNLISPSKLEKFVDELPDMPKIQSFEVVNGVFKS 58
Query: 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNH 123
K LEIGMF+K+WKFHRDLPPTPV+A+GTS A++PGPTIEA+HGID +VTWQNHLP NH
Sbjct: 59 KPLEIGMFKKQWKFHRDLPPTPVYAYGTSKRNATIPGPTIEAIHGIDAFVTWQNHLPSNH 118
Query: 124 ILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHY 183
ILP DPTIPTA+P KKG+PTVVHLHG I EPESDG+A SWFT F+E GPTWT + Y Y
Sbjct: 119 ILPWDPTIPTAVPRTKKGIPTVVHLHGSIGEPESDGHAHSWFTRRFKEVGPTWTKKEYQY 178
Query: 184 HNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRN 243
N+Q PGN WYHDH MGLTRVNLLAGLIGAYI+R DVE PLRLP GD FDR L VFDR+
Sbjct: 179 PNLQHPGNLWYHDHAMGLTRVNLLAGLIGAYIIRDRDVETPLRLPCGDEFDRTLMVFDRS 238
Query: 244 FLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARF 303
FLTNGSIYM+STGNNPSIHPQWQPEYFGDVI+VNGKAWPR+TVRRRKYRFRIINASNARF
Sbjct: 239 FLTNGSIYMSSTGNNPSIHPQWQPEYFGDVIIVNGKAWPRLTVRRRKYRFRIINASNARF 298
Query: 304 FRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPY 363
FRFFF+NGL+FIHV +DSAYL KPV+TN+T+LAP+EIADV++DFS+S SD AIL NDA Y
Sbjct: 299 FRFFFSNGLKFIHVAADSAYLEKPVITNETLLAPSEIADVMVDFSKSKSDSAILGNDAVY 358
Query: 364 PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSN 423
PYP+G+ VN+ANGKVMKFII K E D WRVP+ L++YP ADLS AS TRYIAMYEYTS+
Sbjct: 359 PYPSGDAVNEANGKVMKFIIKKEPELDTWRVPKTLVKYPHADLSGASKTRYIAMYEYTSD 418
Query: 424 TGKPTHLLINAKTLEDPVTETP---------------------------KTLDQTELVNL 456
+PTHL IN K ++PVTETP K +DQT+LV
Sbjct: 419 IDEPTHLYINGKPFDEPVTETPRVGTSEIWNVINLTEDNHPLHIHLGLFKVIDQTKLVKE 478
Query: 457 EEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHAN 516
EEFKACM K+NDAIKC + +HA G K VP HE+GWKNVYK+TPG+VT+ILVRF+++H+N
Sbjct: 479 EEFKACMLKLNDAIKCKIDQHARGDKIEVPAHEKGWKNVYKMTPGFVTKILVRFAFIHSN 538
Query: 517 ASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLI 550
SYPFDA A+PGYVYHCHILDHEDN+MMRPLKLI
Sbjct: 539 ESYPFDAAAQPGYVYHCHILDHEDNVMMRPLKLI 572
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424189|ref|XP_002284144.1| PREDICTED: spore coat protein A [Vitis vinifera] gi|297737718|emb|CBI26919.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/578 (68%), Positives = 459/578 (79%), Gaps = 28/578 (4%)
Query: 1 MALMERILVIHLMFFALSRVVVNSAATTGGGLINPLKLEMFVDELPDMPKIKGYYAANGV 60
M +ME+IL+ HL+ AL VV A + LI +L+MFVDELPDMPKI G+ NGV
Sbjct: 1 MMVMEKILLFHLLSLALLGAVV-EATRSDDRLIKISQLKMFVDELPDMPKILGFDVVNGV 59
Query: 61 VKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLP 120
K L+IGMF KKWKFHRDLPPT VFA+GTS+ TA+VPGPTIEAL+G+DTYVTW+N+LP
Sbjct: 60 PVSKSLQIGMFSKKWKFHRDLPPTRVFAYGTSNNTATVPGPTIEALYGVDTYVTWRNYLP 119
Query: 121 PNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNET 180
HILP DPTIPTA+P+ KKGVPTVVHLHGGIDEP+SDG A SWFT GF E+GPTWT +
Sbjct: 120 SKHILPWDPTIPTAIPATKKGVPTVVHLHGGIDEPQSDGNANSWFTRGFRERGPTWTQKK 179
Query: 181 YHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVF 240
YHY+N+QQPGN WYHDH MGLTRVNLL GLIGAYI+RHPD+E+PL LP G FDRPL VF
Sbjct: 180 YHYYNIQQPGNMWYHDHAMGLTRVNLLVGLIGAYIIRHPDIESPLGLPHGKEFDRPLVVF 239
Query: 241 DRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASN 300
DR+F T+GSIYMN TGNNPSIHPQWQPEYFGD I+VNGKAWPR+TVRRRKYRFRIINASN
Sbjct: 240 DRSFRTDGSIYMNRTGNNPSIHPQWQPEYFGDAIIVNGKAWPRLTVRRRKYRFRIINASN 299
Query: 301 ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360
ARFF FFFTNGLRFIHVGSDS+Y +PV+ +LAP+EI DV++DFSES SD AILAN
Sbjct: 300 ARFFEFFFTNGLRFIHVGSDSSYNKRPVMIKKILLAPSEIVDVIVDFSESKSDSAILANG 359
Query: 361 APYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEY 420
A YPYP+G+PVN NG VMKFII + RE D RVP++LI+YPS DLS A+ TRYIAMYEY
Sbjct: 360 AAYPYPSGDPVNKFNGNVMKFIIKRQREVDTSRVPKRLIKYPSPDLSNAAATRYIAMYEY 419
Query: 421 TSNTGKPTHLLINAKTLEDPVTETPK---------------------------TLDQTEL 453
TS T +PTHL +N K E P TETPK L+Q +L
Sbjct: 420 TSPTDEPTHLFLNGKPYEAPATETPKEGTSEIWNVINLTADNHPLHIHLGLFVVLEQRKL 479
Query: 454 VNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYV 513
V++E+FK CM KIN+A+KC +SK+A G AVP HEQGWKNV+K+TPGYVT+ILVRF+Y+
Sbjct: 480 VDVEKFKECMLKINNAVKCQISKYARGNITAVPAHEQGWKNVFKMTPGYVTKILVRFAYI 539
Query: 514 HANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLIK 551
H+NASYPFDA+AEPGYVYHCHILDHEDN MMRPLK IK
Sbjct: 540 HSNASYPFDASAEPGYVYHCHILDHEDNAMMRPLKFIK 577
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297737720|emb|CBI26921.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/578 (68%), Positives = 459/578 (79%), Gaps = 28/578 (4%)
Query: 1 MALMERILVIHLMFFALSRVVVNSAATTGGGLINPLKLEMFVDELPDMPKIKGYYAANGV 60
M +ME+IL+ HL+ AL VV A + LI +L+MFVDELPDMPKI G+ NGV
Sbjct: 78 MMVMEKILLFHLLSLALLGAVV-EATWSDDRLIKISQLKMFVDELPDMPKILGFDVVNGV 136
Query: 61 VKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLP 120
K L+IGMF KKWKFHRDLPPT VFA+GTS+ TA+VPGPTIEAL+G+DTYVTW+N+LP
Sbjct: 137 PVSKSLQIGMFSKKWKFHRDLPPTRVFAYGTSNNTATVPGPTIEALYGVDTYVTWRNYLP 196
Query: 121 PNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNET 180
HILP D TIPTA+P+ KKGVPTVVHLHGGIDEP+SDG A SWFT GF E+GPTWT +
Sbjct: 197 SKHILPWDRTIPTAIPATKKGVPTVVHLHGGIDEPQSDGNANSWFTRGFRERGPTWTQKK 256
Query: 181 YHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVF 240
YHY+N+QQPGN WYHDH MGLTRVNLLAGLIGAYI+RHPD+E+PL LP G FDRPL VF
Sbjct: 257 YHYYNIQQPGNMWYHDHAMGLTRVNLLAGLIGAYIIRHPDIESPLGLPHGKEFDRPLMVF 316
Query: 241 DRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASN 300
DR+F T+GSIYMN TGNNPSIHPQWQPEYFGD I+VNGKAWPR+TVRRRKYRFRIINASN
Sbjct: 317 DRSFRTDGSIYMNRTGNNPSIHPQWQPEYFGDAIIVNGKAWPRLTVRRRKYRFRIINASN 376
Query: 301 ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360
ARFF FFFTNGLRFIHVGSDS+Y +PV+ +LAP+EI DV++DFSES SD AILAN
Sbjct: 377 ARFFEFFFTNGLRFIHVGSDSSYNKRPVMIKKILLAPSEIVDVIVDFSESKSDSAILANG 436
Query: 361 APYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEY 420
A YPYP+G+PVN NG VMKFII + RE D RVP++LI+YPS DLS A+ TRYIAMYEY
Sbjct: 437 AAYPYPSGDPVNKFNGNVMKFIIKRQREVDTSRVPKRLIKYPSPDLSNAAATRYIAMYEY 496
Query: 421 TSNTGKPTHLLINAKTLEDPVTETPK---------------------------TLDQTEL 453
TS +PTHL +N K EDP TETPK L+Q +L
Sbjct: 497 TSPADEPTHLFLNGKPYEDPATETPKEGTSEIWNVINLTEDNHPLHIHLGLFVVLEQRKL 556
Query: 454 VNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYV 513
V++E+FK CM KIN+A+KC +SK+A G AVP HEQGWKNV+K+TPGYVT+ILVRF+Y+
Sbjct: 557 VDVEKFKECMLKINNAVKCQISKYARGNITAVPAHEQGWKNVFKMTPGYVTKILVRFAYI 616
Query: 514 HANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLIK 551
H+NASYPFDA+AEPGYVYHCHILDHEDN MMRPLK IK
Sbjct: 617 HSNASYPFDASAEPGYVYHCHILDHEDNAMMRPLKFIK 654
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359472883|ref|XP_003631208.1| PREDICTED: spore coat protein A-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/578 (68%), Positives = 459/578 (79%), Gaps = 28/578 (4%)
Query: 1 MALMERILVIHLMFFALSRVVVNSAATTGGGLINPLKLEMFVDELPDMPKIKGYYAANGV 60
M +ME+IL+ HL+ AL VV A + LI +L+MFVDELPDMPKI G+ NGV
Sbjct: 1 MMVMEKILLFHLLSLALLGAVV-EATWSDDRLIKISQLKMFVDELPDMPKILGFDVVNGV 59
Query: 61 VKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLP 120
K L+IGMF KKWKFHRDLPPT VFA+GTS+ TA+VPGPTIEAL+G+DTYVTW+N+LP
Sbjct: 60 PVSKSLQIGMFSKKWKFHRDLPPTRVFAYGTSNNTATVPGPTIEALYGVDTYVTWRNYLP 119
Query: 121 PNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNET 180
HILP D TIPTA+P+ KKGVPTVVHLHGGIDEP+SDG A SWFT GF E+GPTWT +
Sbjct: 120 SKHILPWDRTIPTAIPATKKGVPTVVHLHGGIDEPQSDGNANSWFTRGFRERGPTWTQKK 179
Query: 181 YHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVF 240
YHY+N+QQPGN WYHDH MGLTRVNLLAGLIGAYI+RHPD+E+PL LP G FDRPL VF
Sbjct: 180 YHYYNIQQPGNMWYHDHAMGLTRVNLLAGLIGAYIIRHPDIESPLGLPHGKEFDRPLMVF 239
Query: 241 DRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASN 300
DR+F T+GSIYMN TGNNPSIHPQWQPEYFGD I+VNGKAWPR+TVRRRKYRFRIINASN
Sbjct: 240 DRSFRTDGSIYMNRTGNNPSIHPQWQPEYFGDAIIVNGKAWPRLTVRRRKYRFRIINASN 299
Query: 301 ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360
ARFF FFFTNGLRFIHVGSDS+Y +PV+ +LAP+EI DV++DFSES SD AILAN
Sbjct: 300 ARFFEFFFTNGLRFIHVGSDSSYNKRPVMIKKILLAPSEIVDVIVDFSESKSDSAILANG 359
Query: 361 APYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEY 420
A YPYP+G+PVN NG VMKFII + RE D RVP++LI+YPS DLS A+ TRYIAMYEY
Sbjct: 360 AAYPYPSGDPVNKFNGNVMKFIIKRQREVDTSRVPKRLIKYPSPDLSNAAATRYIAMYEY 419
Query: 421 TSNTGKPTHLLINAKTLEDPVTETPK---------------------------TLDQTEL 453
TS +PTHL +N K EDP TETPK L+Q +L
Sbjct: 420 TSPADEPTHLFLNGKPYEDPATETPKEGTSEIWNVINLTEDNHPLHIHLGLFVVLEQRKL 479
Query: 454 VNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYV 513
V++E+FK CM KIN+A+KC +SK+A G AVP HEQGWKNV+K+TPGYVT+ILVRF+Y+
Sbjct: 480 VDVEKFKECMLKINNAVKCQISKYARGNITAVPAHEQGWKNVFKMTPGYVTKILVRFAYI 539
Query: 514 HANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLIK 551
H+NASYPFDA+AEPGYVYHCHILDHEDN MMRPLK IK
Sbjct: 540 HSNASYPFDASAEPGYVYHCHILDHEDNAMMRPLKFIK 577
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147845689|emb|CAN78466.1| hypothetical protein VITISV_028234 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/578 (67%), Positives = 453/578 (78%), Gaps = 32/578 (5%)
Query: 1 MALMERILVIHLMFFALSRVVVNSAATTGGGLINPLKLEMFVDELPDMPKIKGYYAANGV 60
M L +L IHL+ + R + LI +L+MFVDELPDMPKI G+ NGV
Sbjct: 1 MELKHTLLQIHLI--DMERFL---QLFLDDRLIKISQLKMFVDELPDMPKILGFDVVNGV 55
Query: 61 VKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLP 120
K L+IGMF KKWKFHRDLPPT VFA+GTS+ TA+VPGPTIEAL+G+DTYVTW+N+LP
Sbjct: 56 PVSKSLQIGMFSKKWKFHRDLPPTRVFAYGTSNNTATVPGPTIEALYGVDTYVTWRNYLP 115
Query: 121 PNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNET 180
HILP D TIPTA+P+ KKGVPTVVHLHGGIDEP+SDG A SWFT GF E+GPTWT +
Sbjct: 116 SKHILPWDRTIPTAIPATKKGVPTVVHLHGGIDEPQSDGNANSWFTRGFRERGPTWTQKK 175
Query: 181 YHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVF 240
YHY+N+QQPGN WYHDH MGLTRVNLLAGLIGAYI+RHPD+E+PL LP G FDRPL VF
Sbjct: 176 YHYYNIQQPGNMWYHDHAMGLTRVNLLAGLIGAYIIRHPDIESPLGLPHGKEFDRPLMVF 235
Query: 241 DRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASN 300
DR+F T+GSIYMN TGNNPSIHPQWQPEYFGD I+VNGKAWPR+TVRRRKYRFRIINASN
Sbjct: 236 DRSFRTDGSIYMNRTGNNPSIHPQWQPEYFGDAIIVNGKAWPRLTVRRRKYRFRIINASN 295
Query: 301 ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360
ARFF FFFTNGLRFIHVGSDS+Y +PV+ +LAP+EI DV++DFSES SD AILAN
Sbjct: 296 ARFFEFFFTNGLRFIHVGSDSSYNKRPVMIKKILLAPSEIVDVIVDFSESKSDSAILANG 355
Query: 361 APYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEY 420
A YPYP+G+PVN NG VMKFII + RE D RVP++LI+YPS DLS A+ TRYIAMYEY
Sbjct: 356 AAYPYPSGDPVNKFNGNVMKFIIKRQREVDTSRVPKRLIKYPSPDLSNAAATRYIAMYEY 415
Query: 421 TSNTGKPTHLLINAKTLEDPVTETPK---------------------------TLDQTEL 453
TS +PTHL +N K EDP TETPK L+Q +L
Sbjct: 416 TSPADEPTHLFLNGKPYEDPATETPKEGTSEIWNVINLTEDNHPLHIHLGLFVVLEQRKL 475
Query: 454 VNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYV 513
V++E+FK CM KIN+A+KC +SK+A G AVP HEQGWKNV+K+TPGYVT+ILVRF+Y+
Sbjct: 476 VDVEKFKECMLKINNAVKCQISKYARGNITAVPAHEQGWKNVFKMTPGYVTKILVRFAYI 535
Query: 514 HANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLIK 551
H+NASYPFDA+AEPGYVYHCHILDHEDN MMRPLK IK
Sbjct: 536 HSNASYPFDASAEPGYVYHCHILDHEDNAMMRPLKFIK 573
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449463507|ref|XP_004149475.1| PREDICTED: spore coat protein A-like [Cucumis sativus] gi|449523820|ref|XP_004168921.1| PREDICTED: spore coat protein A-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/566 (67%), Positives = 442/566 (78%), Gaps = 35/566 (6%)
Query: 12 LMFFALSRVVVNSAATTGGGLINPLKLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMF 71
+FF LS V LINP KL MFVD+LPDMPK+ G++ + P L+IGMF
Sbjct: 7 FIFFCLSSTVFG----ISDELINPKKLPMFVDDLPDMPKLLGFHGQH----PNHLQIGMF 58
Query: 72 EKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTI 131
K WKFHRDLPPTPVFA+G S TA+VPGPTIEA+HGI T+VTWQNHLP HILP DPTI
Sbjct: 59 LKTWKFHRDLPPTPVFAYGISKDTATVPGPTIEAVHGISTFVTWQNHLPSKHILPWDPTI 118
Query: 132 PTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGN 191
PTA+P+ GVPTVVHLHGGI EP SDG+A SWFT GF++KGP+WT +TYHY N Q PGN
Sbjct: 119 PTAIPAGNNGVPTVVHLHGGITEPASDGHATSWFTNGFKDKGPSWTKKTYHYPNQQHPGN 178
Query: 192 TWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIY 251
WYHDH MGLTRVNLLAGL+GAYI+ HPDVEAPLRLP G FDR L VFDR+FL NGSI+
Sbjct: 179 LWYHDHAMGLTRVNLLAGLVGAYIICHPDVEAPLRLPYGREFDRSLLVFDRSFLYNGSIF 238
Query: 252 MNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNG 311
MNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRM V+RRKYRFRIINA NARF+RFFFTNG
Sbjct: 239 MNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMRVQRRKYRFRIINAGNARFYRFFFTNG 298
Query: 312 LRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPV 371
L+FI V SDSAYL +PVV+ +LAP+EIADVV+DFS+ST++ ILANDA YPYP+G+PV
Sbjct: 299 LKFIQVASDSAYLSQPVVSKAILLAPSEIADVVVDFSKSTTNTVILANDAAYPYPSGDPV 358
Query: 372 NDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLL 431
N+AN KVMKF I KN+E + +P+KLI+YP DLS+AS TRYIAMYEYTS+ +PTHL
Sbjct: 359 NEANSKVMKFYISKNKEVETQPIPKKLIQYPKPDLSSASYTRYIAMYEYTSDIDEPTHLY 418
Query: 432 INAKTLEDPVTETPK---------------------------TLDQTELVNLEEFKACMN 464
+N K E PVTE PK L+QTELV+LEEFK CM
Sbjct: 419 LNGKPYEAPVTEKPKVGSTEIWYVINLTEDNHPLHIHMGLLAALEQTELVHLEEFKDCMT 478
Query: 465 KINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDAT 524
K NDA+KC + +HA GK++ V +E+GWKNVYK+ PG+VT+ILVRFS +H+N SYPFDAT
Sbjct: 479 KKNDAVKCKIEEHARGKRRKVNSNEKGWKNVYKMMPGFVTKILVRFSNIHSNTSYPFDAT 538
Query: 525 AEPGYVYHCHILDHEDNIMMRPLKLI 550
AEPGYVYHCHILDHEDN MMRPLKL+
Sbjct: 539 AEPGYVYHCHILDHEDNAMMRPLKLV 564
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356575650|ref|XP_003555951.1| PREDICTED: spore coat protein A-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/556 (66%), Positives = 443/556 (79%), Gaps = 28/556 (5%)
Query: 24 SAATTGGGLINPLKLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPP 83
+++ L+N KLE FVDELP MPKI GY+ ++GV K K L+IGMF+KKWKFHRDL P
Sbjct: 20 CSSSASDHLVNVSKLEKFVDELPHMPKILGYHLSDGVPKSKSLKIGMFKKKWKFHRDLAP 79
Query: 84 TPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143
V+AFGT+ TA+VPGPTIEA++G+DT+V WQNHLPP HILP DPTIPTAM ++ +G+P
Sbjct: 80 ATVYAFGTTKHTATVPGPTIEAIYGVDTHVRWQNHLPPKHILPWDPTIPTAMTNSTRGIP 139
Query: 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTR 203
TVVHLHGGI PESDG A +WFT+ + E+GPTWT +TYHY N QQPGN WYHDH MGLTR
Sbjct: 140 TVVHLHGGIHAPESDGNANAWFTSKYNERGPTWTKKTYHYPNNQQPGNLWYHDHAMGLTR 199
Query: 204 VNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHP 263
VNLLAGL+GAYI+RHP +E PL LPSGD FDR L VFDR+F T+GSI+M+STGNNP IHP
Sbjct: 200 VNLLAGLLGAYIIRHPQIEDPLGLPSGDEFDRTLIVFDRSFRTDGSIFMSSTGNNPKIHP 259
Query: 264 QWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAY 323
QWQPEYFGD I+VNGKAWPR+TVRRRKYRFRIINASNARFFRFFFTNGLRF HV SDSAY
Sbjct: 260 QWQPEYFGDAIIVNGKAWPRLTVRRRKYRFRIINASNARFFRFFFTNGLRFTHVASDSAY 319
Query: 324 LGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFII 383
+ KPV TN+T++ P+EI D+V+DFS+S S++AILANDA YPYPAG+PVN+ANGKV+KFII
Sbjct: 320 IEKPVTTNETLVGPSEITDIVVDFSQSKSNLAILANDAKYPYPAGDPVNEANGKVIKFII 379
Query: 384 LKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPVTE 443
+ ++E D RVP++L+EYP DLS+ + TRY+AMYEY S+ +PTHL +NAK E TE
Sbjct: 380 VPDQEVDTSRVPKRLLEYPVVDLSSVAHTRYVAMYEYASDIDEPTHLYLNAKPYEAAATE 439
Query: 444 TP---------------------------KTLDQTELVN-LEEFKACMNKINDAIKCNLS 475
TP K LDQT LV +EF+ CM KINDA+KC++
Sbjct: 440 TPKVGSTEVWYVINLTEDNHPLHIHLGLFKVLDQTALVKPDDEFRECMKKINDAVKCHVD 499
Query: 476 KHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHI 535
K+A GKK+ VP HE+GWKNV+K+ PG+VT+I VRFSY+H NASY FDAT EPGYVYHCH+
Sbjct: 500 KYARGKKEEVPAHERGWKNVFKMIPGHVTKIAVRFSYIHTNASYVFDATTEPGYVYHCHV 559
Query: 536 LDHEDNIMMRPLKLIK 551
LDHEDN MMRPLK+IK
Sbjct: 560 LDHEDNAMMRPLKIIK 575
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356534315|ref|XP_003535702.1| PREDICTED: spore coat protein A-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/573 (64%), Positives = 447/573 (78%), Gaps = 33/573 (5%)
Query: 12 LMFF---ALSRVVVNSAATTGGGLINPLKLEMFVDELPDMPKIKGYYAANGVVKPKKLEI 68
L+FF LS V + ++ L+N KLEMFVDELP MP+I GY+ ++GV + K +I
Sbjct: 3 LLFFHLKCLSLVSLLGCSSASDHLVNVSKLEMFVDELPHMPRILGYHLSDGVPRSKSFKI 62
Query: 69 GMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPID 128
GMF+KKWKFH+DLPPT V+AFGTS TA+VPGPTIEAL+G+DT+V WQNHLPP HILP D
Sbjct: 63 GMFKKKWKFHKDLPPTTVYAFGTSKHTATVPGPTIEALYGVDTHVRWQNHLPPKHILPWD 122
Query: 129 PTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQ 188
PTIPTAM ++ +G+PTVVHLHGGI PESDG A +WFT+ F ++GPTWT +TYHY N QQ
Sbjct: 123 PTIPTAMTNSTRGIPTVVHLHGGIHAPESDGNANAWFTSKFNQRGPTWTKKTYHYPNNQQ 182
Query: 189 PGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNG 248
PGN WYHDH MGLTRVNLLAGL+GAYI+RHP++E PL LPSGD FDR L VFDR+F T+G
Sbjct: 183 PGNLWYHDHAMGLTRVNLLAGLLGAYIIRHPEIEDPLGLPSGDEFDRTLIVFDRSFRTDG 242
Query: 249 SIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFF 308
SI+M+S GNNP IHPQWQPEYFGD I+VNGKAWPR+TVRRRKYRFRIINASNARFFRFFF
Sbjct: 243 SIFMSSIGNNPKIHPQWQPEYFGDAIIVNGKAWPRLTVRRRKYRFRIINASNARFFRFFF 302
Query: 309 TNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAG 368
+NGLRF HV SDSAY+ KPV N+T++ P+EI D+V+DFS S SDVAILANDA YPYP+G
Sbjct: 303 SNGLRFTHVASDSAYIEKPVTANETLVGPSEITDIVVDFSRSKSDVAILANDAKYPYPSG 362
Query: 369 NPVNDANGKVMKFIIL--KNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGK 426
+PVN+ANGKV+KFII+ +++ R+P++ +EYP DLS+ + TRY+AMYEY S+ +
Sbjct: 363 DPVNEANGKVIKFIIIPDHDQQLHTSRLPKRFLEYPLLDLSSVTHTRYVAMYEYASDIDE 422
Query: 427 PTHLLINAKTLEDPVTETP---------------------------KTLDQTELVN-LEE 458
PTHL +NAK E P TE P K LDQTELV +E
Sbjct: 423 PTHLYLNAKPYEAPATENPKVGSTELWYVINLTEDNHPLHIHLGLFKVLDQTELVKPHDE 482
Query: 459 FKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANAS 518
F CM KINDA+KC++ K+A GKK VP HE+GWKNV+K+ PG+VT++ VRFSY+H NAS
Sbjct: 483 FTECMTKINDAVKCHVDKYARGKKIEVPAHEKGWKNVFKMMPGHVTKVAVRFSYIHTNAS 542
Query: 519 YPFDATAEPGYVYHCHILDHEDNIMMRPLKLIK 551
Y FDAT EPGYVYHCH+LDHEDN MMRPLK+IK
Sbjct: 543 YAFDATTEPGYVYHCHVLDHEDNAMMRPLKIIK 575
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|26451035|dbj|BAC42623.1| unknown protein [Arabidopsis thaliana] gi|29028970|gb|AAO64864.1| At1g23010 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/583 (63%), Positives = 442/583 (75%), Gaps = 39/583 (6%)
Query: 1 MALMERILVIHLMFFALSRVVVNSAATTGGGLINPL----KLEMFVDELPDMPKIKGYYA 56
+ RI + ++ AL+ + +T G L + L KL+MFVD+LPDMP++ G+ +
Sbjct: 4 LLCRRRIKRVMVLIIALTWL-----RSTCGELEDQLFEVGKLKMFVDDLPDMPRLYGFNS 58
Query: 57 ANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQ 116
+G++KP L+IGMF KWKFHRDLP TPVFA+GTS A+VPGPTIE ++G+DTYVTW+
Sbjct: 59 VHGIIKPASLQIGMFSTKWKFHRDLPATPVFAYGTSRSKATVPGPTIETVYGVDTYVTWR 118
Query: 117 NHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTW 176
NHLP +HILP DPTI A P + G+PTVVHLHGGI EP SDG A +WFTAGF E GP W
Sbjct: 119 NHLPKSHILPWDPTISPATPKHG-GIPTVVHLHGGIHEPTSDGNADAWFTAGFRETGPKW 177
Query: 177 TNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRP 236
T T HY N QQPGN WYHDH MGLTRVNLLAGL+GAYILRH VE+P +LP+GD FDRP
Sbjct: 178 TKTTLHYENKQQPGNMWYHDHAMGLTRVNLLAGLVGAYILRHHAVESPFQLPTGDEFDRP 237
Query: 237 LFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRII 296
L +FDR+F +GSIYMN+TGNNPSIHPQWQPEYFGDVI+VNGKAWPR+ VRRRKYRFRII
Sbjct: 238 LIIFDRSFRKDGSIYMNATGNNPSIHPQWQPEYFGDVIIVNGKAWPRLNVRRRKYRFRII 297
Query: 297 NASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAI 356
NASNARFF+FFF+NGL FI VGSDSAYL KPV+T +L+P+EI DVV+DF +S S +
Sbjct: 298 NASNARFFKFFFSNGLDFIVVGSDSAYLSKPVMTKSILLSPSEIVDVVVDFYKSPSRTVV 357
Query: 357 LANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIA 416
LANDAPYPYP+G+PVN+ NGKVMKFII E D +P+KLI YP+AD+S A TRYI+
Sbjct: 358 LANDAPYPYPSGDPVNEENGKVMKFIINNESEDDTCTIPKKLINYPNADVSNAVLTRYIS 417
Query: 417 MYEYTSNTGKPTHLLINAKTLEDPVTETPKT---------------------------LD 449
MYEY SN+ +PTHLL+N E PVTETPK+ ++
Sbjct: 418 MYEYVSNSDEPTHLLVNGLPYEAPVTETPKSGTTEVWEVINLTEDNHPLHIHLGLFEVVE 477
Query: 450 QTELV--NLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRIL 507
QT L+ LEEFK CM K NDA+KC +SK+A GKK AV HE+GWKNV+K+ PG+VTRIL
Sbjct: 478 QTALLAAGLEEFKECMTKQNDAVKCQISKYARGKKTAVTAHERGWKNVFKMMPGHVTRIL 537
Query: 508 VRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLI 550
VRFSY+H NASYPFD T EPGYVYHCHILDHEDN+MMRPLK+I
Sbjct: 538 VRFSYIHTNASYPFDPTQEPGYVYHCHILDHEDNMMMRPLKVI 580
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 551 | ||||||
| TAIR|locus:2017699 | 581 | LPR1 "Low Phosphate Root1" [Ar | 0.764 | 0.724 | 0.672 | 9e-204 | |
| TAIR|locus:2026326 | 581 | LPR2 "Low Phosphate Root2" [Ar | 0.773 | 0.733 | 0.666 | 3.6e-198 | |
| UNIPROTKB|G4MXQ4 | 620 | MGG_08046 "Bilirubin oxidase" | 0.627 | 0.558 | 0.310 | 7.1e-29 | |
| UNIPROTKB|G4N1N3 | 627 | MGG_07500 "Bilirubin oxidase" | 0.693 | 0.609 | 0.295 | 2.6e-26 | |
| UNIPROTKB|Q749T5 | 840 | ompC "Multicopper oxidase, man | 0.090 | 0.059 | 0.415 | 1.1e-24 | |
| TIGR_CMR|GSU_2657 | 840 | GSU_2657 "spore coat protein A | 0.090 | 0.059 | 0.415 | 1.1e-24 | |
| UNIPROTKB|Q74DC2 | 1303 | ompB "Laccase family multicopp | 0.186 | 0.079 | 0.311 | 1.3e-20 | |
| TIGR_CMR|GSU_1394 | 1303 | GSU_1394 "laccase family prote | 0.186 | 0.079 | 0.311 | 1.3e-20 | |
| UNIPROTKB|P36649 | 516 | cueO [Escherichia coli K-12 (t | 0.288 | 0.308 | 0.25 | 2.4e-14 | |
| TIGR_CMR|SPO_3671 | 553 | SPO_3671 "muticopper oxidase d | 0.831 | 0.828 | 0.245 | 2.2e-10 |
| TAIR|locus:2017699 LPR1 "Low Phosphate Root1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1566 (556.3 bits), Expect = 9.0e-204, Sum P(2) = 9.0e-204
Identities = 285/424 (67%), Positives = 337/424 (79%)
Query: 37 KLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTA 96
KL+MFVD+LPDMP++ G+ + +G++KP L+IGMF KWKFHRDLP TPVFA+GTS A
Sbjct: 39 KLKMFVDDLPDMPRLYGFNSVHGIIKPASLQIGMFSTKWKFHRDLPATPVFAYGTSRSKA 98
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
+VPGPTIE ++G+DTYVTW+NHLP +HILP DPTI A P + G+PTVVHLHGGI EP
Sbjct: 99 TVPGPTIETVYGVDTYVTWRNHLPKSHILPWDPTISPATPKHG-GIPTVVHLHGGIHEPT 157
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYIL 216
SDG A +WFTAGF E GP WT T HY N QQPGN WYHDH MGLTRVNLLAGL+GAYIL
Sbjct: 158 SDGNADAWFTAGFRETGPKWTKTTLHYENKQQPGNMWYHDHAMGLTRVNLLAGLVGAYIL 217
Query: 217 RHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVV 276
RH VE+P +LP+GD FDRPL +FDR+F +GSIYMN+TGNNPSIHPQWQPEYFGDVI+V
Sbjct: 218 RHHAVESPFQLPTGDEFDRPLIIFDRSFRKDGSIYMNATGNNPSIHPQWQPEYFGDVIIV 277
Query: 277 NGKAWPRMTVRRRKYRFRIINASNAXXXXXXXTNGLRFIHVGSDSAYLGKPVVTNDTVLA 336
NGKAWPR+ VRRRKYRFRIINASNA +NGL FI VGSDSAYL KPV+T +L+
Sbjct: 278 NGKAWPRLNVRRRKYRFRIINASNARFFKFFFSNGLDFIVVGSDSAYLSKPVMTKSILLS 337
Query: 337 PAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPE 396
P+EI DVV+DF +S S +LANDAPYPYP+G+PVN+ NGKVMKFII E D +P+
Sbjct: 338 PSEIVDVVVDFYKSPSRTVVLANDAPYPYPSGDPVNEENGKVMKFIINNESEDDTCTIPK 397
Query: 397 KLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPVTETPK--TLDQTELV 454
KLI YP+AD+S A TRYI+MYEY SN+ +PTHLL+N E PVTETPK T + E++
Sbjct: 398 KLINYPNADVSNAVLTRYISMYEYVSNSDEPTHLLVNGLPYEAPVTETPKSGTTEVWEVI 457
Query: 455 NLEE 458
NL E
Sbjct: 458 NLTE 461
|
|
| TAIR|locus:2026326 LPR2 "Low Phosphate Root2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1531 (544.0 bits), Expect = 3.6e-198, Sum P(2) = 3.6e-198
Identities = 286/429 (66%), Positives = 336/429 (78%)
Query: 32 LINPLKLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGT 91
L N KLEMFVD+LP +P + GY+ NG +KPK L IGMF KKWKFHRDLP TPVFA+GT
Sbjct: 36 LFNLGKLEMFVDKLPHIPTLHGYHFVNGFLKPKSLHIGMFFKKWKFHRDLPATPVFAYGT 95
Query: 92 SSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG 151
S +A+VPGPTIEA++G+DTYVTW+NHLP +HILP DPTI A+P + G+PTVVHLHGG
Sbjct: 96 SKRSATVPGPTIEAVYGVDTYVTWRNHLPLHHILPWDPTISPAIPKHG-GIPTVVHLHGG 154
Query: 152 IDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLI 211
I EP SDG A SWFTAGF+E G WT +T HY N QQPGN WYHDH GLTRVNLLAGL+
Sbjct: 155 IHEPTSDGNADSWFTAGFKETGSKWTKKTTHYVNKQQPGNMWYHDHAAGLTRVNLLAGLL 214
Query: 212 GAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFG 271
G+YILRH VE+PLRLP+G FDRPL +FDR+F +GSIYMN+TGNNP+IHPQWQPEYFG
Sbjct: 215 GSYILRHSSVESPLRLPTGREFDRPLVIFDRSFRKDGSIYMNATGNNPTIHPQWQPEYFG 274
Query: 272 DVIVVNGKAWPRMTVRRRKYRFRIINASNAXXXXXXXTNGLRFIHVGSDSAYLGKPVVTN 331
D I+VNGKAWPR+TVRRRKYRFRI NASNA +NGL FI VGSDSAYL KPV T
Sbjct: 275 DAIIVNGKAWPRLTVRRRKYRFRITNASNARFFRFFFSNGLDFIVVGSDSAYLAKPVSTK 334
Query: 332 DTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDP 391
+LAP+EI DV++DFS+STS AILAN+APYPYP+G+PV + N KVMKFII E D
Sbjct: 335 SVLLAPSEIVDVLVDFSKSTSKTAILANNAPYPYPSGDPVTEENSKVMKFIINYKSEVDT 394
Query: 392 WRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPVTETPK--TLD 449
+P+KLIEYP A +S ++ TRYIAM+EY S+ +PTHL IN PVTETPK T +
Sbjct: 395 SIIPKKLIEYPPAHVSTSTRTRYIAMFEYVSSIDEPTHLYINGLPYNAPVTETPKIGTSE 454
Query: 450 QTELVNLEE 458
E++NL E
Sbjct: 455 VWEVINLTE 463
|
|
| UNIPROTKB|G4MXQ4 MGG_08046 "Bilirubin oxidase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 345 (126.5 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 122/393 (31%), Positives = 177/393 (45%)
Query: 143 PTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLT 202
PT HLHG P DG+A E+ P + + Y+Y N Q WYHDH + T
Sbjct: 116 PTSTHLHGSYSRPAFDGWA--------EDLTPVGSFKDYYYPNSQNGRMLWYHDHAIDHT 167
Query: 203 RVNLLAGLIGAYILRHPDVEAPLRLPSG-DVFDRPLFVFDRNFLTNGSIYMNSTGNNPSI 261
N GL GAYI+ H E L LPSG FD PL + + + +GS++ + G S+
Sbjct: 168 AENAYYGLAGAYII-HDKNEDKLGLPSGYGQFDVPLVLAAKQYNQDGSLF-SPEGETTSL 225
Query: 262 HPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINA--SNAXXXXXXXTN--GLR--FI 315
+GDVI VNG+ WP M V+ RKYRFR +NA S T+ G + F
Sbjct: 226 --------YGDVIQVNGQPWPFMNVQARKYRFRFLNAAISRTFWMYFELTDQVGKKIPFQ 277
Query: 316 HVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDAN 375
+ +DS L P T++ ++ AE ++V DF + +L N+ + P + ++
Sbjct: 278 VIATDSGLLSGPQKTDNMYISMAERYEIVFDFKDFKGKTIMLRNERDFA-PDTDYLH--T 334
Query: 376 GKVMKFIILKNRETDPWRVPEKL--IEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLIN 433
K+M F + K+ +DP +VP L I YP A T +++ N G+ T IN
Sbjct: 335 DKIMTFKVAKDSVSDPSQVPSSLRTIPYPPAK------TTVDKRFKFERNNGQWT---IN 385
Query: 434 AKTLEDP---VTETPKTLDQTELVNLEEFKA-CMNKIN-DAIKCNLSKHACGKKQAVPVH 488
T ED V P+ TE+ LE + I+ + + K GK+
Sbjct: 386 GVTWEDANNRVLAKPQR-GSTEVWELENSSGGWTHPIHVHLVDFQVIKRVNGKRTLQSYE 444
Query: 489 EQGWKNVYKITPGYVTRILVRFSYVHANASYPF 521
G K+V + PG + VR Y Y F
Sbjct: 445 TAGLKDVVWLGPGET--VTVRAIYGPMEGLYMF 475
|
|
| UNIPROTKB|G4N1N3 MGG_07500 "Bilirubin oxidase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 323 (118.8 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 131/444 (29%), Positives = 192/444 (43%)
Query: 121 PNHILPIDPTIPTAMP-SNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179
P I+P D T M +N VHLHG DG+A+ G +
Sbjct: 128 PTVIVPRDTE--TVMRFANNADQENAVHLHGSYSRAPWDGWAEDLTFPG--------QYK 177
Query: 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSG-DVFDRPLF 238
Y+Y N Q WYHDH M T N G G Y++ P +A L LPSG FD PL
Sbjct: 178 DYYYPNTQTARTLWYHDHAMHKTAENAYFGQAGFYMITDPAEDA-LNLPSGYGKFDIPLM 236
Query: 239 VFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINA 298
+ + + +NG++Y + S+ W GDVI VNG+ WP V+ RKYR R +NA
Sbjct: 237 LNSKQYNSNGTLY-SPRNERDSL---W-----GDVIHVNGQPWPFFDVQPRKYRLRFLNA 287
Query: 299 --SNAXXXXXXXTNGLR----FIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTS 352
S TN L F + SDS +PV TN ++ E +VV+DF++
Sbjct: 288 AVSRNFALYFTKTNDLNARLDFQVIASDSGLFTEPVTTNKIYVSSGERYEVVVDFAQYAG 347
Query: 353 DVAILANDAPYPYPAGNPVN-DANGKVMKFIILKNR---ETDPWRVPEKL--IEYPSADL 406
+I + P G N + G+VMK + + E D VP +L + +PS
Sbjct: 348 Q-SIEIRNIPDVDNLGTDRNYEKTGQVMKINVAEASTLAEPDTSVVPSRLRAVNFPSGGN 406
Query: 407 SAASTTRYI-AMYEYTSN-TGKPTHLLINAKTLEDPVTETPK-TLDQTELVNLEEFKACM 463
+ R+ + E+ N G +N + L + P+ T++ EL N+ A
Sbjct: 407 GIDHSFRFHRSRSEWLINGVGFSD---VNNRVLAN----VPRGTVEIWELENVSG--AWT 457
Query: 464 NKIN-DAIKCNLSKHACGKKQAV--PVHEQGWKNVYKITPGYVTRILVRFSYVHANASYP 520
+ I+ + + G + V P +G K+V + ++LV Y P
Sbjct: 458 HPIHMHLVDFRIISRQGGARNGVVEPYESKGLKDVVWLARN--EKVLVEAHYA------P 509
Query: 521 FDATAEPGYVYHCHILDHEDNIMM 544
+D Y++HCH L HEDN MM
Sbjct: 510 WDGV----YMFHCHNLIHEDNDMM 529
|
|
| UNIPROTKB|Q749T5 ompC "Multicopper oxidase, manganese oxidase family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 110 (43.8 bits), Expect = 1.1e-24, Sum P(6) = 1.1e-24
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 484 AVPV--HEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDN 541
AVP +EQG+K+ PG +TR+ F + YV+HCHIL+HEDN
Sbjct: 723 AVPPEPYEQGYKDTVLAYPGQITRVKATFDKIGL-------------YVWHCHILEHEDN 769
Query: 542 IMMRP 546
MMRP
Sbjct: 770 EMMRP 774
|
|
| TIGR_CMR|GSU_2657 GSU_2657 "spore coat protein A" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 110 (43.8 bits), Expect = 1.1e-24, Sum P(6) = 1.1e-24
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 484 AVPV--HEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDN 541
AVP +EQG+K+ PG +TR+ F + YV+HCHIL+HEDN
Sbjct: 723 AVPPEPYEQGYKDTVLAYPGQITRVKATFDKIGL-------------YVWHCHILEHEDN 769
Query: 542 IMMRP 546
MMRP
Sbjct: 770 EMMRP 774
|
|
| UNIPROTKB|Q74DC2 ompB "Laccase family multicopper oxidase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 124 (48.7 bits), Expect = 1.3e-20, Sum P(7) = 1.3e-20
Identities = 38/122 (31%), Positives = 57/122 (46%)
Query: 146 VHLHGGIDEPESDGYAKSWFT-AGFEEKGPTWTN--------------ETYHYHNMQQPG 190
+HLHGG SDG W T AG PT + +TY++ N Q
Sbjct: 223 LHLHGGRTPWISDGTPHQWITPAGEMTDYPTGVSVENVPDMPDPGPGAQTYYWTNQQSSR 282
Query: 191 NTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDV--FDRPLFVFDRNFLTNG 248
+YHDH G+TR+N+ G Y++R VE L + +G + + PL + D+ F+
Sbjct: 283 MLFYHDHAWGITRLNVYVGEAAGYLIRDA-VEQEL-ITAGTIPSAELPLVIEDKTFVDPA 340
Query: 249 SI 250
+I
Sbjct: 341 TI 342
|
|
| TIGR_CMR|GSU_1394 GSU_1394 "laccase family protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 124 (48.7 bits), Expect = 1.3e-20, Sum P(7) = 1.3e-20
Identities = 38/122 (31%), Positives = 57/122 (46%)
Query: 146 VHLHGGIDEPESDGYAKSWFT-AGFEEKGPTWTN--------------ETYHYHNMQQPG 190
+HLHGG SDG W T AG PT + +TY++ N Q
Sbjct: 223 LHLHGGRTPWISDGTPHQWITPAGEMTDYPTGVSVENVPDMPDPGPGAQTYYWTNQQSSR 282
Query: 191 NTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDV--FDRPLFVFDRNFLTNG 248
+YHDH G+TR+N+ G Y++R VE L + +G + + PL + D+ F+
Sbjct: 283 MLFYHDHAWGITRLNVYVGEAAGYLIRDA-VEQEL-ITAGTIPSAELPLVIEDKTFVDPA 340
Query: 249 SI 250
+I
Sbjct: 341 TI 342
|
|
| UNIPROTKB|P36649 cueO [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 155 (59.6 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 42/168 (25%), Positives = 75/168 (44%)
Query: 185 NMQQPGNT-WYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSG-DVFDRPLFVFDR 242
N+ QP T W+H H G T + GL G ++ ++ L LP + D P+ V D+
Sbjct: 130 NVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEI-LKLMLPKQWGIDDVPVIVQDK 188
Query: 243 NFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNAX 302
F +G I ++ W FGD ++ NG +P+ R R R++N NA
Sbjct: 189 KFSADGQIDYQLDVMTAAVG--W----FGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNAR 242
Query: 303 XXXXXXTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES 350
++ + SD L +PV ++ + E +V+++ +++
Sbjct: 243 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDN 290
|
|
| TIGR_CMR|SPO_3671 SPO_3671 "muticopper oxidase domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 132/538 (24%), Positives = 203/538 (37%)
Query: 43 DELPDMPKIKGYYAANGVVKPKKL-EIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGP 101
+ L D+P+++ + NG VK K + E G F+ R L P + F T S+PGP
Sbjct: 34 EPLRDLPELR---SQNGHVKTKLIIENGKFQVG---DRVLT-VPAYRFEHMD-TGSLPGP 85
Query: 102 TIEALHGIDTYVTWQ--NHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDG 159
T+ G +V W N + P I P D ++ T VH+HG P
Sbjct: 86 TLRIRPG--DHVEWDLVNKMTPTGI-P-DGASDEQKNMFQQLEYTNVHVHGMQVSP---- 137
Query: 160 YAKSWFTAGFEEKGPTWTNETYHYH------NMQQP-GNTWYHDHTMGLTRVNLLAGLIG 212
K ++ P E Y YH + QP G WYH H G T GL G
Sbjct: 138 --KPGADNVYQVLRPFCPPEPYSYHVPGPDTGLPQPAGMFWYHPHKHGSTAHQAWEGLSG 195
Query: 213 AYILRHPDVEAP--LRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYF 270
A I+ E P + + L V + +I N+ G +P QP
Sbjct: 196 AIIVEGDIDEVPEIKNIRERVIVLNGLLVNPAGEVPRAAIVPNA-GFSPFSPIPSQPT-- 252
Query: 271 GDVIV-VNGKAWPRMTVRRRKY-RFRIINASNAXXXXXXXTNGLRFIHVGSDSAYLGKPV 328
D+I+ +NG+ P + +R + R+R +NA+ +G F +G D P
Sbjct: 253 -DIILTMNGQLRPVIDIRPGEVQRWRFLNAA-PHRFFWLNLDGHDFYQIGQDGIPFAAPR 310
Query: 329 VTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR- 387
++AP A+ ++ E + A+ Y G+P G V+ + +
Sbjct: 311 PVKRILMAPGNRAEFLVKGGE-VGRYDLHADQ----YEQGHPGGARPGWVIGTMEVNGTI 365
Query: 388 ETDPWRVPEKLIEYPSA-DLSAASTTR---------------YIAMYEYTSNTGKPTHLL 431
DP +P KL+E P DL A+ Y+ ++++ P
Sbjct: 366 RDDP--LPSKLVEPPKMPDLPIANRREIRFKGEISGNEEKGEYVGSHDHSGGMRPPVQFY 423
Query: 432 INAKTLEDPVTETPKTLDQTELVNLEEFKACMNK--INDAIKCNLSKHACGKKQAVPVHE 489
++ K E +DQ L E +N+ +++ P ++
Sbjct: 424 LDGKIFE------LNRIDQKVLAGTVEEWTLINEDVFQHPFHIHVNPFQVIDINGQPTYD 477
Query: 490 QGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPL 547
W +V + P R+ VR Y F + VYHCHIL HEDN MM L
Sbjct: 478 DSWWDVIAL-PSK-GRLTVRM--------Y-FRPDVDGKTVYHCHILPHEDNGMMANL 524
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P07788 | COTA_BACSU | No assigned EC number | 0.3871 | 0.8656 | 0.9298 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pg.C_LG_X001039 | hypothetical protein (573 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 551 | |||
| COG2132 | 451 | COG2132, SufI, Putative multicopper oxidases [Seco | 1e-30 | |
| PRK10965 | 523 | PRK10965, PRK10965, multicopper oxidase; Provision | 6e-15 | |
| PRK10883 | 471 | PRK10883, PRK10883, FtsI repressor; Provisional | 1e-12 | |
| PRK10965 | 523 | PRK10965, PRK10965, multicopper oxidase; Provision | 2e-08 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 6e-06 | |
| pfam07732 | 119 | pfam07732, Cu-oxidase_3, Multicopper oxidase | 6e-06 | |
| pfam07731 | 135 | pfam07731, Cu-oxidase_2, Multicopper oxidase | 8e-04 |
| >gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 1e-30
Identities = 102/467 (21%), Positives = 146/467 (31%), Gaps = 90/467 (19%)
Query: 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGID 153
++PGPTI G + N L V T VH HG
Sbjct: 57 YNGALPGPTIRVKKGDTVTLDLTNRLL---------------------VDTSVHWHGLPV 95
Query: 154 EPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGA 213
E DG GP T TY + PG WYH HT G GL GA
Sbjct: 96 PGEMDGVPP----LTQIPPGPGET-PTYTF-TQDVPGTYWYHPHTHGQVY----DGLAGA 145
Query: 214 YILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDV 273
I+ + PL V D P+ + D +G+ + GD
Sbjct: 146 LII-EDENSEPL-----GVDDEPVILQDDWLDEDGTDLYQEG--------PAMGGFPGDT 191
Query: 274 IVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDT 333
++VNG P V R R++NA NAR + G + D L PV ++
Sbjct: 192 LLVNGAILPFKAVPGGVVRLRLLNAGNARTYHLALGGG-PLTVIAVDGGPLP-PVSVDEL 249
Query: 334 VLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPW- 392
LAP E +V++D ++ + V + A P A ++ + P
Sbjct: 250 YLAPGERYEVLVDMNDGGA-VTLTALGEDMPDT--LKGFRAPNPIL-------TPSYPVL 299
Query: 393 --RVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKT-LEDPVTETPKTLD 449
RV + + + +T I + +
Sbjct: 300 NGRVGAPTGD-MADHAPVGLLVTILVEPGPNRDTDFHLIGGIGGYVWAINGKAFDDNRVT 358
Query: 450 QT---------ELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITP 500
L N + + P GWK+ + P
Sbjct: 359 LIAKAGTRERWVLTNDTPMPHPFHLHGHFFQVLSGDA------PAPGAAPGWKDTVLVAP 412
Query: 501 GYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPL 547
G R+LVR FDA +++HCHIL+HEDN MM
Sbjct: 413 GE--RLLVR-----------FDADYPGPWMFHCHILEHEDNGMMGQF 446
|
Length = 451 |
| >gnl|CDD|236810 PRK10965, PRK10965, multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 6e-15
Identities = 67/276 (24%), Positives = 106/276 (38%), Gaps = 59/276 (21%)
Query: 87 FAFGTSSLTA----SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGV 142
FA T++ T ++ GP + G V N LP
Sbjct: 59 FAGKTATATWGYNGNLLGPAVRLQRGKAVTVDITNQLP---------------------E 97
Query: 143 PTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNT-WYHDHTMGL 201
T +H HG E DG + G ++ T+T + QP T W+H H G
Sbjct: 98 ETTLHWHGLEVPGEVDGGPQGIIAPG-GKRTVTFTVD--------QPAATCWFHPHQHGK 148
Query: 202 TRVNLLAGLIGAYILRHPDVEAPLRLPS--GDVFDRPLFVFDRNFLTNGSIYMNSTGNNP 259
T + GL G ++ + L LP G V D P+ + D+ F +G I
Sbjct: 149 TGRQVAMGLAGLVLIEDDESLK-LGLPKQWG-VDDIPVILQDKRFSADGQI--------- 197
Query: 260 SIHPQWQPE-------YFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGL 312
+Q + +FGD ++ NG +P+ R R R++N NAR ++G
Sbjct: 198 ----DYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNLATSDGR 253
Query: 313 RFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348
+ SD L +PV ++ + E +V++D S
Sbjct: 254 PLYVIASDGGLLAEPVKVSELPILMGERFEVLVDTS 289
|
Length = 523 |
| >gnl|CDD|182808 PRK10883, PRK10883, FtsI repressor; Provisional | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 1e-12
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 26/183 (14%)
Query: 187 QQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSG-DVFDRPLFVFDR--- 242
Q WYH +T ++ GL G +++ +V L +P+ V D P+ + D+
Sbjct: 134 QNAATCWYHANTPNRMAQHVYNGLAGMWLVED-EVSKSLPIPNHYGVDDFPVIIQDKRLD 192
Query: 243 NFLTNGSIYMNSTGNNPSIHPQWQPE----YFGDVIVVNGKAWPRMTVRRRKYRFRIINA 298
NF T P++ + GD ++VNG P + V R R R++NA
Sbjct: 193 NFGT----------------PEYNEPGSGGFVGDTLLVNGVQSPYVEVSRGWVRLRLLNA 236
Query: 299 SNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILA 358
SNAR ++ ++G + D +L PV LAP E ++++D S +V+I A
Sbjct: 237 SNARRYQLQMSDGRPLHVIAGDQGFLPAPVSVKQLSLAPGERREILVDMSNG-DEVSITA 295
Query: 359 NDA 361
+A
Sbjct: 296 GEA 298
|
Length = 471 |
| >gnl|CDD|236810 PRK10965, PRK10965, multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 2e-08
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 483 QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNI 542
+ H GWK+ ++ G + +LV+F + DA E Y+ HCH+L+HED
Sbjct: 466 KPPAAHRAGWKDTVRVE-GGRSEVLVKFDH---------DAPKEHAYMAHCHLLEHEDTG 515
Query: 543 MM 544
MM
Sbjct: 516 MM 517
|
Length = 523 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 6e-06
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 263 PQWQPEYFGDVIVVNGKAW---PRMTVRRRK-YRFRIINASNARFFRFFFTNGLRFIHVG 318
+ P D +++NGK +TV K YR RIIN + F G + V
Sbjct: 30 TDFPPV--PDAVLINGKDGASLATLTVTPGKTYRLRIINVALDDSLNFSI-EGHKMTVVE 86
Query: 319 SDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAN 359
D Y+ P + + P + V++ ++ + I+A+
Sbjct: 87 VDGVYV-NPFTVDSLDIFPGQRYSVLVTANQDPGNYWIVAS 126
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 6e-06
Identities = 37/129 (28%), Positives = 45/129 (34%), Gaps = 37/129 (28%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGID--- 153
PGPTI G V N+L PT +H HG +
Sbjct: 22 QFPGPTIRVREGDTVVVNVTNNLD---------------------EPTTIHWHG-LRQPG 59
Query: 154 EPESDGYAKSWFTAGFEEKG--PTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLI 211
P +DG G + P + TY + QQ G WYH HT L AGL
Sbjct: 60 TPWADG------VPGVTQCPIPPGESF-TYRFTVKQQAGTYWYHSHTSWLQ---QAAGLY 109
Query: 212 GAYILRHPD 220
GA I+ P
Sbjct: 110 GAIIIEDPA 118
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 119 |
| >gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 8e-04
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 13/60 (21%)
Query: 488 HEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPL 547
+ ++ ++ PG I + +++HCHIL H D MM
Sbjct: 83 VDPVRRDTVQVPPGGWVAIRFKADNPGP-------------WLFHCHILWHLDQGMMGQF 129
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 551 | |||
| PRK10965 | 523 | multicopper oxidase; Provisional | 100.0 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 100.0 | |
| PLN02835 | 539 | oxidoreductase | 100.0 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 100.0 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 100.0 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 100.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 100.0 | |
| PLN02991 | 543 | oxidoreductase | 100.0 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 100.0 | |
| PLN02792 | 536 | oxidoreductase | 100.0 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 100.0 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 100.0 | |
| PLN02604 | 566 | oxidoreductase | 100.0 | |
| PLN02191 | 574 | L-ascorbate oxidase | 100.0 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 100.0 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 100.0 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 100.0 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 99.97 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 99.79 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 99.75 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 99.57 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 99.42 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.07 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 98.86 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 98.4 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 98.39 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 98.28 | |
| PRK02710 | 119 | plastocyanin; Provisional | 98.17 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 98.17 | |
| PLN02835 | 539 | oxidoreductase | 98.01 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 98.01 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 97.98 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 97.92 | |
| PLN02604 | 566 | oxidoreductase | 97.89 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 97.77 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 97.42 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 97.42 | |
| PLN02792 | 536 | oxidoreductase | 97.4 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 97.4 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 97.39 | |
| PLN02991 | 543 | oxidoreductase | 97.36 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 97.32 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 96.98 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 96.96 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.83 | |
| PLN02191 | 574 | L-ascorbate oxidase | 96.71 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 96.63 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 96.53 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 96.51 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 96.32 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 96.19 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 96.17 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 95.43 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 95.33 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 94.99 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 92.52 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 92.05 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 86.2 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 85.56 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 82.84 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 81.8 |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-87 Score=725.10 Aligned_cols=439 Identities=23% Similarity=0.348 Sum_probs=345.2
Q ss_pred ccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCC
Q 008840 43 DELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPN 122 (551)
Q Consensus 43 ~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~ 122 (551)
.+||+||.+++. ..+ .+++++.+.++++.++. .+.+|+|| |++||||||+++||+|+|+++|+|++
T Consensus 32 ~~lp~p~~l~~~--~~~-----~~~L~~~~~~~~~~~~~-~t~~~~yN-----g~~PGPtIr~~~Gd~v~v~~~N~L~~- 97 (523)
T PRK10965 32 PALPIPPLLTPD--ARG-----RIQLTIQAGQSSFAGKT-ATATWGYN-----GNLLGPAVRLQRGKAVTVDITNQLPE- 97 (523)
T ss_pred CCCCCCccccCC--CCc-----cEEEEEEEEEEEecCCc-eeEEEEEC-----CCCCCceEEEECCCEEEEEEEECCCC-
Confidence 589999999752 122 35677778888997765 57799998 99999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCch
Q 008840 123 HILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLT 202 (551)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t 202 (551)
+|+|||||+++++.+||+| ||+|.||++| +|+|+++|++||||||+|.|+.|
T Consensus 98 --------------------~ttiHwHGl~~~~~~DG~p-----q~~I~PG~s~---~Y~f~~~q~aGT~WYH~H~~g~t 149 (523)
T PRK10965 98 --------------------ETTLHWHGLEVPGEVDGGP-----QGIIAPGGKR---TVTFTVDQPAATCWFHPHQHGKT 149 (523)
T ss_pred --------------------CccEEcccccCCCccCCCC-----CCCCCCCCEE---EEEeccCCCCceEEEecCCCCCc
Confidence 8999999999999999987 5689999999 99999988899999999999999
Q ss_pred hhhhhccceEEEEEeCCCCCCCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc
Q 008840 203 RVNLLAGLIGAYILRHPDVEAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW 281 (551)
Q Consensus 203 ~~qv~~GL~G~~iV~dp~~~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~ 281 (551)
+.|+++||+|+|||+|++ +.++.+|+.+ .+|++|+||||.++.+|++.|.... ..+..+..||.++|||+.+
T Consensus 150 ~~Qv~~GL~G~lIV~d~~-~~~~~lp~~~~~~d~~lvlqD~~~~~~g~~~~~~~~------~~~~~g~~gd~~lVNG~~~ 222 (523)
T PRK10965 150 GRQVAMGLAGLVLIEDDE-SLKLGLPKQWGVDDIPVILQDKRFSADGQIDYQLDV------MTAAVGWFGDTLLTNGAIY 222 (523)
T ss_pred HHHHhCcCeEEEEEcCcc-ccccCCcccCCCceeeEEEEeeeeCCCCceeccccc------cccccCccCCeEEECCccc
Confidence 999999999999999876 5566677622 5799999999999999987654321 1223456799999999999
Q ss_pred CceeecCeEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 282 PRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 282 P~~~v~~~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|++++++++|||||||+|++++|+|++.+||+|+|||+||+++.+|+.+++|.|+|||||||+|++++ ++++.|.+..
T Consensus 223 p~~~v~~~~~RlRliNas~~r~~~l~~~dg~~~~vIa~DG~~l~~P~~v~~l~lapGeR~dvlv~~~~--~~~~~l~~~~ 300 (523)
T PRK10965 223 PQHAAPRGWLRLRLLNGCNARSLNLATSDGRPLYVIASDGGLLAEPVKVSELPILMGERFEVLVDTSD--GKAFDLVTLP 300 (523)
T ss_pred ceeecCCCEEEEEEEeccCCceEEEEEcCCceEEEEEeCCCcccCccEeCeEEECccceEEEEEEcCC--CceEEEEEec
Confidence 99999889999999999999999999977999999999999999999999999999999999999987 3588888764
Q ss_pred CCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc--c---------CCC-----
Q 008840 362 PYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT--S---------NTG----- 425 (551)
Q Consensus 362 ~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~--~---------~~g----- 425 (551)
......+.........+++|++.+. .+...+|++|.++++++.......|++.|.... + ..+
T Consensus 301 ~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~P~~l~~~~~~~~~~~~~~r~~~l~~~~~~~~~~m~~~~~~~~~~~~~ 378 (523)
T PRK10965 301 VSQMGMALAPFDKPLPVLRIQPLLI--SASGTLPDSLASLPALPSLEGLTVRRLQLSMDPRLDMMGMQMLMEKYGDQAMA 378 (523)
T ss_pred ccCcccccccCCCceeEEEEeccCc--CCCCcCChhhccCCCCCcccccceeEEEEeeccccchhhhhhccccccccccc
Confidence 3211101111112346888887632 245578999887765443222233444331100 0 000
Q ss_pred --------------------------Cc-----ceEEEcccccCCCCCC-Ccc--eeeeEEEEeeee-eeeeeccccCce
Q 008840 426 --------------------------KP-----THLLINAKTLEDPVTE-TPK--TLDQTELVNLEE-FKACMNKINDAI 470 (551)
Q Consensus 426 --------------------------~~-----~~~~INg~~f~~~~~~-~~~--~~~~~~l~n~~~-~~~~~~~~~~~~ 470 (551)
.. ..|+|||+.|++.... .++ .+|+|++.|.+. +.|++|.|++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~~~~~~~G~~e~w~i~N~~~~~~Hp~HlHg~-- 456 (523)
T PRK10965 379 GMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKINGKAFDMNKPMFAAKKGQYERWVISGVGDMMLHPFHIHGT-- 456 (523)
T ss_pred cccccccccccccccccccccccccccccccccccccCCCeECCCCCcceecCCCCEEEEEEEeCCCCCccCeEEeCc--
Confidence 00 1158999999864332 222 389999999985 6899999998
Q ss_pred eeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 471 KCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 471 ~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+|+|.. .+| .++...+.+|||||+|+| ++++|+++|+. .+ +++| ||||||||||||+|||++|+|
T Consensus 457 ~F~Vl~-~~g--~~~~~~~~~wkDTv~v~~-~~~~i~~~f~~--~~--------~~~g~~~~HCHiL~Hed~GMM~~~~V 522 (523)
T PRK10965 457 QFRILS-ENG--KPPAAHRAGWKDTVRVEG-GRSEVLVKFDH--DA--------PKEHAYMAHCHLLEHEDTGMMLGFTV 522 (523)
T ss_pred EEEEEE-ecC--CCCCccccccccEEEECC-cEEEEEEEecC--CC--------CCCCCEEEEeCchhhhccCccceeEe
Confidence 456655 477 456667899999999987 88999999983 21 2456 999999999999999999999
Q ss_pred c
Q 008840 550 I 550 (551)
Q Consensus 550 ~ 550 (551)
+
T Consensus 523 ~ 523 (523)
T PRK10965 523 S 523 (523)
T ss_pred C
Confidence 6
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-85 Score=701.27 Aligned_cols=427 Identities=19% Similarity=0.281 Sum_probs=338.4
Q ss_pred ccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCC
Q 008840 43 DELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPN 122 (551)
Q Consensus 43 ~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~ 122 (551)
.+|++||.+++.. +. .++|++.+..+++.++. .+.+|+|| |++||||||+++||+|+|+++|+|++
T Consensus 32 ~~l~~p~~l~~~~---~~----~~~l~~~~~~~~~~~g~-~~~v~~~n-----g~~pGPtir~~~Gd~v~v~v~N~L~~- 97 (471)
T PRK10883 32 QPLPVPPLLESRR---GQ----PLFLTLQRAHWSFTGGT-KASVWGIN-----GRYLGPTIRVWKGDDVKLIYSNRLTE- 97 (471)
T ss_pred CCCCCCccccCCC---CC----cEEEEEEEeEEEecCCc-eeeEEEEC-----CcccCCeEEEECCCEEEEEEEeCCCC-
Confidence 5899999987422 32 35777888888997765 78899998 99999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCch
Q 008840 123 HILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLT 202 (551)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t 202 (551)
+|++||||+++++.+||.+. +.|.||++| +|+|+++|++||||||+|.++.+
T Consensus 98 --------------------~ttiHwHGl~~~~~~~~g~~-----~~I~PG~~~---~y~f~~~~~aGT~WYH~H~~~~t 149 (471)
T PRK10883 98 --------------------PVSMTVSGLQVPGPLMGGPA-----RMMSPNADW---APVLPIRQNAATCWYHANTPNRM 149 (471)
T ss_pred --------------------CCceeECCccCCCCCCCCcc-----ccCCCCCeE---EEEEecCCCceeeEEccCCCCch
Confidence 89999999999988555443 258899999 99999988899999999999999
Q ss_pred hhhhhccceEEEEEeCCCCCCCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc
Q 008840 203 RVNLLAGLIGAYILRHPDVEAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW 281 (551)
Q Consensus 203 ~~qv~~GL~G~~iV~dp~~~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~ 281 (551)
+.|+++||+|+|||+|++ ++++.+|..+ .+|++|+||||.++.+|++.+.. .+..+..||.++|||+.+
T Consensus 150 ~~qv~~GL~G~lII~d~~-~~~~~~p~~~~~~d~~l~l~D~~~~~~g~~~~~~---------~~~~g~~gd~~lvNG~~~ 219 (471)
T PRK10883 150 AQHVYNGLAGMWLVEDEV-SKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNE---------PGSGGFVGDTLLVNGVQS 219 (471)
T ss_pred hhhHhcCCeEEEEEeCCc-ccccCCcccCCCcceeEEeeeeeeccCCCccccc---------cccCCccCCeeEECCccC
Confidence 999999999999999876 5556667632 45999999999999988765421 123356799999999999
Q ss_pred CceeecCeEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 282 PRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 282 P~~~v~~~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|+++|++++|||||||+|+++.|+|+|+|||+|+|||+||+++.+|+.++.|.|+|||||||+|++++ |+++.|.+..
T Consensus 220 p~~~v~~~~~RlRliNas~~~~~~l~l~d~~~~~vIa~DGg~~~~P~~~~~l~l~pGeR~dvlVd~~~--~~~~~l~~~~ 297 (471)
T PRK10883 220 PYVEVSRGWVRLRLLNASNARRYQLQMSDGRPLHVIAGDQGFLPAPVSVKQLSLAPGERREILVDMSN--GDEVSITAGE 297 (471)
T ss_pred CeEEecCCEEEEEEEEccCCceEEEEEcCCCeEEEEEeCCCcccCCcEeCeEEECCCCeEEEEEECCC--CceEEEECCC
Confidence 99999989999999999999999999977999999999999999999999999999999999999976 4588888853
Q ss_pred CCCCCC--CCCCCC----CCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCCCcceEEEccc
Q 008840 362 PYPYPA--GNPVND----ANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAK 435 (551)
Q Consensus 362 ~~~~~~--g~~~~~----~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g~~~~~~INg~ 435 (551)
...... +..... ....++++++.+.....+..+|.+|.+.+ +....+.++|++.+.. ..|.|||+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-~~~~~~~~~~~~~l~~--------~~~~INg~ 368 (471)
T PRK10883 298 AAGIVDRLRGFFEPSSILVSTLVLTLRPTGLLPLVTDNLPMRLLPDE-IMEGSPIRSREISLGD--------DLPGINGA 368 (471)
T ss_pred ccccccccccccCCccccccceeEEEEccccccCCCCcCChhhcCCC-CCCCCCcceEEEEecC--------CcCccCCc
Confidence 221110 111111 13468888886532334456788777644 3444556677777642 13689999
Q ss_pred ccCCCCCC-Ccc--eeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEec
Q 008840 436 TLEDPVTE-TPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSY 512 (551)
Q Consensus 436 ~f~~~~~~-~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~ 512 (551)
+|++...+ .++ .+|+|++.|. +.|+||.|++. |+|.. .+| .++.++|.+|||||+|+ ++|+|+++|+
T Consensus 369 ~~~~~~~~~~~~~g~~e~W~~~n~--~~HP~HlHg~~--FqVl~-~~G--~~~~~~~~gwkDTV~v~--~~v~i~~~f~- 438 (471)
T PRK10883 369 LWDMNRIDVTAQQGTWERWTVRAD--MPQAFHIEGVM--FLIRN-VNG--AMPFPEDRGWKDTVWVD--GQVELLVYFG- 438 (471)
T ss_pred ccCCCcceeecCCCCEEEEEEECC--CCcCEeECCcc--EEEEE-ecC--CCCCccccCcCcEEEcC--CeEEEEEEec-
Confidence 99875432 232 2899999665 57999999985 46766 477 45566789999999995 4699999999
Q ss_pred cccCC-CCCCCCCCCCceEEeeccccccccCcccceEEcC
Q 008840 513 VHANA-SYPFDATAEPGYVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 513 ~~~~~-~~p~~~~~~pg~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
++++ .+ .||||||||||||+|||++|+|+.
T Consensus 439 -~~~~~~~--------~~m~HCHiLeHeD~GMM~~~~V~~ 469 (471)
T PRK10883 439 -QPSWAHF--------PFLFYSQTLEMADRGSIGQLLVNP 469 (471)
T ss_pred -CCCCCCC--------cEEeecccccccccCCccCeEEec
Confidence 3321 11 399999999999999999999973
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-66 Score=561.04 Aligned_cols=411 Identities=15% Similarity=0.166 Sum_probs=293.1
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+.+...... +. ...+|+|| |++|||+||+++||+|+|+++|+|++ +|
T Consensus 31 ~y~~~v~~~~~~~d-g~-~~~~~~~N-----G~~PGP~I~~~~GD~v~v~v~N~L~~---------------------~t 82 (539)
T PLN02835 31 YYTWTVTYGTISPL-GV-PQQVILIN-----GQFPGPRLDVVTNDNIILNLINKLDQ---------------------PF 82 (539)
T ss_pred EEEEEEEEEEeccC-Ce-EEEEEEEC-----CcCCCCCEEEECCCEEEEEEEeCCCC---------------------CC
Confidence 45555556544442 33 67889998 99999999999999999999999997 89
Q ss_pred EEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCC
Q 008840 145 VVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVE 222 (551)
Q Consensus 145 ~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~ 222 (551)
+|||||+++.+. +||+|+ +||+|+||++| +|+|++.+++||||||+|.. .|+.+||+|+|||++++ +
T Consensus 83 tiHWHGl~~~~~~~~DGv~~---tQ~pI~PG~sf---~Y~F~~~~q~GT~WYHsH~~----~q~~~Gl~G~lIV~~~~-~ 151 (539)
T PLN02835 83 LLTWNGIKQRKNSWQDGVLG---TNCPIPPNSNY---TYKFQTKDQIGTFTYFPSTL----FHKAAGGFGAINVYERP-R 151 (539)
T ss_pred cEEeCCcccCCCCCCCCCcc---CcCCCCCCCcE---EEEEEECCCCEeEEEEeCcc----chhcCcccceeEEeCCC-C
Confidence 999999999865 999985 79999999999 99998755899999999973 48999999999998654 3
Q ss_pred CCCCCCCCCcCceeEEEEEeeecCCCceEecC-CCCCCCCCCCCCCccCCceEEECCcccCceeecC-eEEEEEEEecCC
Q 008840 223 APLRLPSGDVFDRPLFVFDRNFLTNGSIYMNS-TGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRR-RKYRFRIINASN 300 (551)
Q Consensus 223 ~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~-~g~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~-~~~RlRllNas~ 300 (551)
.++..+.. +.|++|+|+||+++....+.... .|. ...++|.++|||+..+.++|++ ++|||||||+|.
T Consensus 152 ~~~p~~~~-d~e~~l~l~Dw~~~~~~~~~~~~~~g~---------~~~~~d~~liNG~~~~~~~v~~G~~yRlRliNa~~ 221 (539)
T PLN02835 152 IPIPFPLP-DGDFTLLVGDWYKTSHKTLQQRLDSGK---------VLPFPDGVLINGQTQSTFSGDQGKTYMFRISNVGL 221 (539)
T ss_pred CCcCCCCC-CceEEEEeeccccCCHHHHHHHhhcCC---------CCCCCceEEEccccCceEEECCCCEEEEEEEEcCC
Confidence 33333443 88999999999776543321110 110 1235789999999999999998 899999999999
Q ss_pred CceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEE
Q 008840 301 ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMK 380 (551)
Q Consensus 301 ~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~ 380 (551)
.+.+.|+| +||+|+||++||+++ +|..++.|.|++||||||+|++++.+ ++|+|+...... . . .......
T Consensus 222 ~~~~~f~i-~gH~~~VI~~DG~~v-~p~~~~~l~i~~GqRydvlv~~~~~~-g~y~i~a~~~~~---~--~--~~~~~ai 291 (539)
T PLN02835 222 STSLNFRI-QGHTMKLVEVEGSHT-IQNIYDSLDVHVGQSVAVLVTLNQSP-KDYYIVASTRFT---R--Q--ILTATAV 291 (539)
T ss_pred CccEEEEE-CCCEEEEEEECCccC-CCceeeEEEECcCceEEEEEEcCCCC-CcEEEEEEcccc---C--C--CcceEEE
Confidence 99999999 699999999999999 68899999999999999999999875 489998642111 0 0 0112333
Q ss_pred EEEccCCCCCCCCCCC--------C----------CCCCCCCCCcc-------CceeeEEeeee-cccCCCCcceEEEcc
Q 008840 381 FIILKNRETDPWRVPE--------K----------LIEYPSADLSA-------ASTTRYIAMYE-YTSNTGKPTHLLINA 434 (551)
Q Consensus 381 f~v~~~~~~~~~~lP~--------~----------L~~~~~~~~~~-------~~~~r~~~l~~-~~~~~g~~~~~~INg 434 (551)
+++.+........+|. . |.+....+.+. ....+.+.+.. .....| ...|.|||
T Consensus 292 l~Y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~w~iN~ 370 (539)
T PLN02835 292 LHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLING-KQRYAVNG 370 (539)
T ss_pred EEECCCCCCCCCCCCCCCccccccccchhhccccccCccccCCCCCccccccccCCCceEEEeccccccCC-eEEEEECC
Confidence 4444321101111111 0 11110000000 01122222211 111112 35699999
Q ss_pred cccCCCCCCC--------------------cc----------------eeeeEEEEeeeeeeeeeccccCceeeeeeeec
Q 008840 435 KTLEDPVTET--------------------PK----------------TLDQTELVNLEEFKACMNKINDAIKCNLSKHA 478 (551)
Q Consensus 435 ~~f~~~~~~~--------------------~~----------------~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~ 478 (551)
.+|..+.... +. .+.++.+.|.....|+||+|||.| .+....
T Consensus 371 ~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~Veivi~N~~~~~HP~HLHGh~F--~Vlg~G 448 (539)
T PLN02835 371 VSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDF--WVVGYG 448 (539)
T ss_pred cccCCCCCChhhhhhhcCCCccccCccccCCCCCccccCCeEEEcCCCCEEEEEEECCCCCCCCCCCCCccE--EEEecc
Confidence 9997532110 00 034667777777789999999955 555433
Q ss_pred cCCc-----cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 479 CGKK-----QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 479 ~G~~-----~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
+|.- .......+-+||||.|++++++.|+|+.| ||| |+|||||++|...|||..|+|.+
T Consensus 449 ~g~~~~~~~~~~nl~nP~~RDTv~vp~~gw~~IrF~aD--------------NPG~Wl~HCHi~~H~~~Gm~~~~~V~~ 513 (539)
T PLN02835 449 SGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLD--------------NQGMWNMRSAIWERQYLGQQFYLRVWN 513 (539)
T ss_pred CCCCCcccccccCCCCCCccceEEeCCCCEEEEEEECc--------------CCEEeeeeecchhhhhcccEEEEEEcc
Confidence 4411 01122347899999999999999988877 899 99999999999999999998863
|
|
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-65 Score=558.16 Aligned_cols=402 Identities=21% Similarity=0.284 Sum_probs=282.9
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+.+.+++++. . .+.+|+|| |++|||+||+++||+|+|+++|+|++ +|
T Consensus 47 ~~~L~v~~~~~~~~G-~-~~~~~~~N-----g~~PGP~ir~~~Gd~v~v~v~N~l~~---------------------~t 98 (587)
T TIGR01480 47 EFDLTIGETMVNFTG-R-ARPAITVN-----GSIPGPLLRWREGDTVRLRVTNTLPE---------------------DT 98 (587)
T ss_pred eEEEEEEEEEEecCC-e-EEEEEEEC-----CccCCceEEEECCCEEEEEEEcCCCC---------------------Cc
Confidence 466667777777753 3 57889998 99999999999999999999999997 89
Q ss_pred EEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCC
Q 008840 145 VVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAP 224 (551)
Q Consensus 145 ~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~ 224 (551)
+|||||+++++.+||+|+ +++|+|.||++| +|+|++. ++||||||||.. .|+..||+|+|||++++ +.+
T Consensus 99 siHwHGl~~~~~~DGvP~--vt~~~I~PG~s~---~Y~f~~~-~~GTyWYHsH~~----~q~~~GL~G~lIV~~~~-~~p 167 (587)
T TIGR01480 99 SIHWHGILLPFQMDGVPG--VSFAGIAPGETF---TYRFPVR-QSGTYWYHSHSG----FQEQAGLYGPLIIDPAE-PDP 167 (587)
T ss_pred eEEcCCCcCCccccCCCc--ccccccCCCCeE---EEEEECC-CCeeEEEecCch----hHhhccceEEEEECCCc-ccc
Confidence 999999999999999998 889999999999 9999995 899999999973 58899999999999543 333
Q ss_pred CCCCCCCcCceeEEEEEeeecCCCceEecC-----------------------CCCCC--CCCCCCC---------CccC
Q 008840 225 LRLPSGDVFDRPLFVFDRNFLTNGSIYMNS-----------------------TGNNP--SIHPQWQ---------PEYF 270 (551)
Q Consensus 225 ~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~-----------------------~g~~~--~~~~~~~---------~~~~ 270 (551)
+ .+++|++|+|+||.+....++.... .|... .....|. ....
T Consensus 168 ~----~~D~E~vl~L~Dw~~~~p~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~d~~dv~ 243 (587)
T TIGR01480 168 V----RADREHVVLLSDWTDLDPAALFRKLKVMAGHDNYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADVN 243 (587)
T ss_pred C----CCCceEEEEeeecccCCHHHHHHhhhcccccccccccchhhhhhhhccccccccccccccccccccCCccccccc
Confidence 2 2488999999999865322221000 00000 0000021 0111
Q ss_pred C--ceEEECCcccC---ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEE
Q 008840 271 G--DVIVVNGKAWP---RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVV 344 (551)
Q Consensus 271 g--d~~lVNG~~~P---~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVl 344 (551)
| ..++|||+..+ .+.+++ ++|||||||+|+.+.|.|+| +||+|+||++||+++ +|+.+++|.|+|||||||+
T Consensus 244 G~~~~~LiNG~~~~~~~~~~v~~G~rvRLR~INas~~~~f~l~I-~gh~m~VIa~DG~~v-~Pv~vd~l~I~pGeRyDVl 321 (587)
T TIGR01480 244 GSTYTYLMNGTTPAGNWTGLFRPGEKVRLRFINGSAMTYFDVRI-PGLKLTVVAVDGQYV-HPVSVDEFRIAPAETFDVI 321 (587)
T ss_pred CccceEEEcCccCCCCceEEECCCCEEEEEEEecCCCceEEEEE-CCCEEEEEEcCCcCc-CceEeCeEEEcCcceeEEE
Confidence 2 24889999754 377887 89999999999999999999 599999999999999 8999999999999999999
Q ss_pred EEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCC--------------------------------
Q 008840 345 IDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPW-------------------------------- 392 (551)
Q Consensus 345 v~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~-------------------------------- 392 (551)
|+.++. +.|.|.+...... | ..+..+.+.+......+
T Consensus 322 V~~~~~--g~~~i~a~~~~~~--~-------~~~~~l~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 390 (587)
T TIGR01480 322 VEPTGD--DAFTIFAQDSDRT--G-------YARGTLAVRLGLTAPVPALDPRPLLTMKDMGMGGMHHGMDHSKMSMGGM 390 (587)
T ss_pred EecCCC--ceEEEEEEecCCC--c-------eEEEEEecCCCCCCCCCCCCCccccChhhcccccccccccccccccCcc
Confidence 998643 3777766321000 0 00001111000000000
Q ss_pred ------------------------------------------------------CCCC---------CCCCCCC-CCCcc
Q 008840 393 ------------------------------------------------------RVPE---------KLIEYPS-ADLSA 408 (551)
Q Consensus 393 ------------------------------------------------------~lP~---------~L~~~~~-~~~~~ 408 (551)
.|.+ .|+...+ ++...
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~ 470 (587)
T TIGR01480 391 PGMDMSMRAQSNAPMDHSQMAMDASPKHPASEPLNPLVDMIVDMPMDRMDDPGIGLRDNGRRVLTYADLHSLFPPPDGRA 470 (587)
T ss_pred cccCccccccccccCccccccccccccCcccccCCccccccccCcccccCCCCcccccCCcceeehhhccccccccCcCC
Confidence 0000 0000000 11112
Q ss_pred CceeeEEeeeecccCCCCcceEEEcccccCCC--CCCCcceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCC
Q 008840 409 ASTTRYIAMYEYTSNTGKPTHLLINAKTLEDP--VTETPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVP 486 (551)
Q Consensus 409 ~~~~r~~~l~~~~~~~g~~~~~~INg~~f~~~--~~~~~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~ 486 (551)
+.++.++.|.... ....|+|||+.|.+. ..-.......|.+.|.+...|+||.|+|.| .+.. .+|.
T Consensus 471 p~r~~~~~L~g~m----~~~~wtiNG~~~~~~~pl~v~~Gervri~l~N~t~~~HpmHlHG~~f--~v~~-~~G~----- 538 (587)
T TIGR01480 471 PGREIELHLTGNM----ERFAWSFDGEAFGLKTPLRFNYGERLRVVLVNDTMMAHPIHLHGMWS--ELED-GQGE----- 538 (587)
T ss_pred CCceEEEEEcCCC----ceeEEEECCccCCCCCceEecCCCEEEEEEECCCCCCcceeEcCcee--eeec-CCCc-----
Confidence 3333333332211 123599999999852 111111267899999999999999999843 4422 2331
Q ss_pred CcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 487 VHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 487 ~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
...||||+.|.||++++|.|+++ +|| |+||||+|+|++.|||+.|+|.
T Consensus 539 --~~~~~dTv~V~Pg~t~~~~f~ad--------------~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 539 --FQVRKHTVDVPPGGKRSFRVTAD--------------ALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred --ccccCCceeeCCCCEEEEEEECC--------------CCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 23589999999999999988877 778 9999999999999999999984
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-63 Score=543.22 Aligned_cols=415 Identities=19% Similarity=0.257 Sum_probs=288.6
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+.+.. +.++.-...+|+|| |++|||+|++++||+|+|+++|+|+. +|
T Consensus 5 ~y~~~it~~~--~~pdG~~~~~~~~N-----G~~PGP~i~~~~GD~v~v~v~N~l~~---------------------~t 56 (539)
T TIGR03389 5 HYTFDVQEKN--VTRLCSTKSILTVN-----GKFPGPTLYAREGDTVIVNVTNNVQY---------------------NV 56 (539)
T ss_pred EEEEEEEEEE--eccCCcEeEEEEEC-----CcccCCEEEEEcCCEEEEEEEeCCCC---------------------Ce
Confidence 4555555543 33443367889998 99999999999999999999999997 89
Q ss_pred EEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCC
Q 008840 145 VVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVE 222 (551)
Q Consensus 145 ~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~ 222 (551)
+|||||+++.+. +||+|+ +|||+|+||++| +|+|++.+++||||||||.++ .++||+|+|||++++ +
T Consensus 57 siHwHGl~q~~~~~~DGv~~--vTq~pI~PG~s~---~Y~f~~~~~~GT~WYHsH~~~-----~~~Gl~G~lIV~~~~-~ 125 (539)
T TIGR03389 57 TIHWHGVRQLRNGWADGPAY--ITQCPIQPGQSY---VYNFTITGQRGTLWWHAHISW-----LRATVYGAIVILPKP-G 125 (539)
T ss_pred eEecCCCCCCCCCCCCCCcc--cccCCcCCCCeE---EEEEEecCCCeeEEEecCchh-----hhccceEEEEEcCCC-C
Confidence 999999998776 899998 999999999999 999998669999999999953 247999999999766 4
Q ss_pred CCCCCCCCCcCceeEEEEEeeecCCCceEec--CCCCCCCCCCCCCCccCCceEEECCcccC----------ceeecC-e
Q 008840 223 APLRLPSGDVFDRPLFVFDRNFLTNGSIYMN--STGNNPSIHPQWQPEYFGDVIVVNGKAWP----------RMTVRR-R 289 (551)
Q Consensus 223 ~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~--~~g~~~~~~~~~~~~~~gd~~lVNG~~~P----------~~~v~~-~ 289 (551)
.++.++.. ++|++|+|+||+......+... ..|. ...++|.++|||+..+ .++|++ +
T Consensus 126 ~~~~~~~~-d~e~~l~l~Dw~~~~~~~~~~~~~~~~~---------~~~~~d~~liNG~~~~~~~~~~~~~~~i~v~~G~ 195 (539)
T TIGR03389 126 VPYPFPKP-DREVPIILGEWWNADVEAVINQANQTGG---------APNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGK 195 (539)
T ss_pred CCCCCCCC-CceEEEEecccccCCHHHHHHHHHhcCC---------CCCccceEEECCCcCCCCCCCCCCceEEEECCCC
Confidence 44444443 7899999999965433222110 0111 1124689999999753 588988 8
Q ss_pred EEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCC
Q 008840 290 KYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGN 369 (551)
Q Consensus 290 ~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~ 369 (551)
+|||||||+|..+.+.|+| +||+|+||++||.++ +|+.+++|.|++||||||+|++++.+ ++|+|+...... +.
T Consensus 196 ~~RlRlINa~~~~~~~~~i-dgH~~~VIa~DG~~~-~P~~~~~l~i~~GqRydVlv~a~~~~-g~y~i~~~~~~~---~~ 269 (539)
T TIGR03389 196 TYLLRIINAALNDELFFAI-ANHTLTVVEVDATYT-KPFKTKTIVIGPGQTTNVLLTADQSP-GRYFMAARPYMD---AP 269 (539)
T ss_pred EEEEEEEeccCCceEEEEE-CCCeEEEEEeCCccc-CceEeCeEEecCCCEEEEEEECCCCC-ceEEEEEecccc---Cc
Confidence 9999999999999999999 699999999999999 89999999999999999999998866 489998753211 10
Q ss_pred CCCCCCCceEEEEEccCCCCC-C--CCCC------------CCCCCC-----CCCCCccCceeeEEeeeecc--------
Q 008840 370 PVNDANGKVMKFIILKNRETD-P--WRVP------------EKLIEY-----PSADLSAASTTRYIAMYEYT-------- 421 (551)
Q Consensus 370 ~~~~~~~~vm~f~v~~~~~~~-~--~~lP------------~~L~~~-----~~~~~~~~~~~r~~~l~~~~-------- 421 (551)
...........+++.+..... + ...| ..|.++ +......+..+..+.+....
T Consensus 270 ~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 349 (539)
T TIGR03389 270 GAFDNTTTTAILQYKGTSNSAKPILPTLPAYNDTAAATNFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNNTC 349 (539)
T ss_pred cCCCCcceEEEEEECCCCCCCCCCCCCCCCCCchhhhhHHHhhcccccccCCCCCCCCCCCeEEEEEeecccccCccccc
Confidence 001112235556665432111 0 0011 012211 11101122222222332100
Q ss_pred -cCCCCcceEEEcccccCCCCC--------------------CCc---------------------------ceeeeEEE
Q 008840 422 -SNTGKPTHLLINAKTLEDPVT--------------------ETP---------------------------KTLDQTEL 453 (551)
Q Consensus 422 -~~~g~~~~~~INg~~f~~~~~--------------------~~~---------------------------~~~~~~~l 453 (551)
...+....|.|||.+|..+.. ..| ..+.++.+
T Consensus 350 ~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi 429 (539)
T TIGR03389 350 QGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVL 429 (539)
T ss_pred ccCCCcEEEEEECCcccCCCCcchhhhhhcccCCccccCCccCCCccccCCCCCcccccccccCceEEEecCCCEEEEEE
Confidence 111233468999988642110 000 01334455
Q ss_pred Eeee---eeeeeeccccCceeeeeeeeccCCc------cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCC
Q 008840 454 VNLE---EFKACMNKINDAIKCNLSKHACGKK------QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDAT 524 (551)
Q Consensus 454 ~n~~---~~~~~~~~~~~~~~~~v~~~~~G~~------~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~ 524 (551)
.|.. ...|+||+|||.| .+.....|.- .......+..||||.|++++++.|+++.+
T Consensus 430 ~n~~~~~~~~HP~HLHGh~F--~Vlg~g~g~~~~~~~~~~~nl~nP~rRDTv~vp~~g~vvirf~ad------------- 494 (539)
T TIGR03389 430 QDTSILGSENHPIHLHGYNF--FVVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFVAD------------- 494 (539)
T ss_pred ecCCcCCCCCCcEeEcCCce--EEEEeccCCCCcccCccccccCCCCeeeeEEcCCCceEEEEEecC-------------
Confidence 5653 2379999999955 5554333420 01122456789999999999999977776
Q ss_pred CCCc-eEEeeccccccccCcccceEEc
Q 008840 525 AEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 525 ~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
||| |++||||.+|...|||..|.+.
T Consensus 495 -NPG~W~~HCHi~~H~~~Gm~~~~~~~ 520 (539)
T TIGR03389 495 -NPGVWFMHCHLEVHTTWGLKMAFLVD 520 (539)
T ss_pred -CCeEEEEEecccchhhhcceEEEEEc
Confidence 899 9999999999999999999763
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-63 Score=537.48 Aligned_cols=410 Identities=15% Similarity=0.147 Sum_probs=288.3
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+...... ++.-...+|+|| |++|||+||+++||+|+|+++|+|++ +|
T Consensus 29 ~y~~~v~~~~~~--pdG~~r~~~~iN-----Gq~PGP~I~~~~GD~v~V~v~N~l~~---------------------~t 80 (552)
T PLN02354 29 FFTWNVTYGTAS--PLGVPQQVILIN-----GQFPGPNINSTSNNNIVINVFNNLDE---------------------PF 80 (552)
T ss_pred EEEEEEEEEEec--CCCeEEEEEEEC-----CCCcCCcEEEeCCCEEEEEEEECCCC---------------------Cc
Confidence 345445454333 333367889998 99999999999999999999999987 89
Q ss_pred EEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCC
Q 008840 145 VVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVE 222 (551)
Q Consensus 145 ~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~ 222 (551)
+|||||+++... +||+|+ |||+|+||++| +|+|++.+++||||||+|.. .|+.+||+|+|||++++ +
T Consensus 81 tiHWHGi~q~~~~~~DGv~~---TQcpI~PG~sf---~Y~F~~~~q~GT~WYHsH~~----~Q~~~Gl~G~lII~~~~-~ 149 (552)
T PLN02354 81 LLTWSGIQQRKNSWQDGVPG---TNCPIPPGTNF---TYHFQPKDQIGSYFYYPSTG----MHRAAGGFGGLRVNSRL-L 149 (552)
T ss_pred ccccccccCCCCcccCCCcC---CcCCCCCCCcE---EEEEEeCCCCcceEEecCcc----ceecCCccceEEEcCCc-C
Confidence 999999998765 999984 89999999999 99999866899999999973 58999999999999765 3
Q ss_pred CCCCCCCCCcCceeEEEEEeeecCCCceEec-CCCCCCCCCCCCCCccCCceEEECCcc-------cCceeecC-eEEEE
Q 008840 223 APLRLPSGDVFDRPLFVFDRNFLTNGSIYMN-STGNNPSIHPQWQPEYFGDVIVVNGKA-------WPRMTVRR-RKYRF 293 (551)
Q Consensus 223 ~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~-~~g~~~~~~~~~~~~~~gd~~lVNG~~-------~P~~~v~~-~~~Rl 293 (551)
.+.+.... +.|++|+|+||+.+....+... ..|.. ....|.+||||+. .+.++|++ ++|||
T Consensus 150 ~~~p~~~~-d~e~~l~l~Dw~~~~~~~~~~~~~~g~~---------~~~~d~~liNG~~~~~~~~~~~~~~v~~Gk~yRl 219 (552)
T PLN02354 150 IPVPYADP-EDDYTVLIGDWYTKSHTALKKFLDSGRT---------LGRPDGVLINGKSGKGDGKDEPLFTMKPGKTYRY 219 (552)
T ss_pred CCCCCCCc-CceEEEEeeeeccCCHHHHHHHHhcCCC---------CCCCCeEEEeCCcCCCCCCCceEEEECCCCEEEE
Confidence 33333222 6799999999977654432110 01110 1125899999996 47889998 89999
Q ss_pred EEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCC
Q 008840 294 RIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVND 373 (551)
Q Consensus 294 RllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~ 373 (551)
||||+|..+.+.|+| +||+|+||++||.++ +|..++.|.|++||||||+|++++.+| +|+|+...... +.
T Consensus 220 RiINa~~~~~~~f~I-dgH~~tVIa~DG~~v-~p~~~~~l~i~~GqRydVlv~a~~~~g-~Y~i~a~~~~~---~~---- 289 (552)
T PLN02354 220 RICNVGLKSSLNFRI-QGHKMKLVEMEGSHV-LQNDYDSLDVHVGQCFSVLVTANQAPK-DYYMVASTRFL---KK---- 289 (552)
T ss_pred EEEecCCCceEEEEE-CCceEEEEEeCCccc-CCcceeEEEEccCceEEEEEECCCCCC-cEEEEEecccc---CC----
Confidence 999999999999999 699999999999999 789999999999999999999998764 89998753211 10
Q ss_pred CCCceEEEEEccCCCCCCCCCCC-----------------CCCCCCCCCCc-------cCceeeEEeeeecc-cCCCCcc
Q 008840 374 ANGKVMKFIILKNRETDPWRVPE-----------------KLIEYPSADLS-------AASTTRYIAMYEYT-SNTGKPT 428 (551)
Q Consensus 374 ~~~~vm~f~v~~~~~~~~~~lP~-----------------~L~~~~~~~~~-------~~~~~r~~~l~~~~-~~~g~~~ 428 (551)
.......+++.+.........|. .|.+....+.+ .....+.+.+.... ...| ..
T Consensus 290 ~~~~~ail~Y~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~ 368 (552)
T PLN02354 290 VLTTTGIIRYEGGKGPASPELPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNSASKVDG-KL 368 (552)
T ss_pred CccEEEEEEECCCCCCCCCCCCCCCcccccchhhhhhhhhcccccccCCCCCCccccccccccceEEEecccccCCc-eE
Confidence 11123344554432111011111 01111100000 01122333332211 1112 34
Q ss_pred eEEEcccccCCCCCCC-----------------------------cc----------eeeeEEEEeeeeeeeeeccccCc
Q 008840 429 HLLINAKTLEDPVTET-----------------------------PK----------TLDQTELVNLEEFKACMNKINDA 469 (551)
Q Consensus 429 ~~~INg~~f~~~~~~~-----------------------------~~----------~~~~~~l~n~~~~~~~~~~~~~~ 469 (551)
.|.|||.+|..+.+.. .. .+.++.|.|.....|+||+|||.
T Consensus 369 ~~~iNn~s~~~p~~P~L~~~~~~~~~g~~~~~~~~~~pp~~~~~~~~~~~v~~~~~~~~VeiVi~n~~~~~HP~HLHGh~ 448 (552)
T PLN02354 369 RYALNGVSHVDPETPLKLAEYFGVADKVFKYDTIKDNPPAKITKIKIQPNVLNITFRTFVEIIFENHEKSMQSWHLDGYS 448 (552)
T ss_pred EEEECCccCCCCCCChHHhhhhcccCCccccCccccCCccccCccccCCeeEEcCCCCEEEEEEeCCCCCCCCCcCCCcc
Confidence 6899999886331110 00 13445566665668999999995
Q ss_pred eeeeeeeeccCCc-----cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCc
Q 008840 470 IKCNLSKHACGKK-----QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIM 543 (551)
Q Consensus 470 ~~~~v~~~~~G~~-----~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GM 543 (551)
| .+.....|.- .......+-.||||.|++++++.|+|+.| ||| |+|||||..|...||
T Consensus 449 F--~Vlg~G~G~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRF~aD--------------NPGvW~~HCHi~~H~~~g~ 512 (552)
T PLN02354 449 F--FAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKSWAAILLTFD--------------NAGMWNIRSENWERRYLGQ 512 (552)
T ss_pred E--EEEeecCCCCCccccccCCcCCCCccceEEeCCCCeEEEEEEec--------------CCeEEeeeccccccccccc
Confidence 5 4554444421 11122457899999999999999988887 999 999999999999999
Q ss_pred ccceEEc
Q 008840 544 MRPLKLI 550 (551)
Q Consensus 544 M~~~~V~ 550 (551)
-..|.|+
T Consensus 513 ~l~~~v~ 519 (552)
T PLN02354 513 QLYASVL 519 (552)
T ss_pred eEEEEEe
Confidence 9888775
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-62 Score=526.95 Aligned_cols=411 Identities=16% Similarity=0.142 Sum_probs=287.0
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+.... ..++.-...+|+|| |++|||+||+++||+|+|+++|+|++ +|
T Consensus 28 ~~~~~vt~~~--~~pdG~~~~~~~vN-----G~~PGP~I~~~~GD~v~V~v~N~L~~---------------------~t 79 (545)
T PLN02168 28 SYQWVVSYSQ--RFILGGNKQVIVIN-----DMFPGPLLNATANDVINVNIFNNLTE---------------------PF 79 (545)
T ss_pred EEEEEEEEEE--ecCCCeEEEEEEEC-----CcCCCCcEEEECCCEEEEEEEeCCCC---------------------Cc
Confidence 3455444543 33344467889998 99999999999999999999999997 89
Q ss_pred EEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCC
Q 008840 145 VVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVE 222 (551)
Q Consensus 145 ~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~ 222 (551)
+|||||+++.+. +||+|+ +||+|+||++| +|+|++.+++||||||+|.. .|+.+||+|+|||++++ +
T Consensus 80 tiHWHGl~~~~~~~~DGv~g---tQcpI~PG~sf---tY~F~~~~q~GT~WYHsH~~----~Q~~~GL~G~lII~~~~-~ 148 (545)
T PLN02168 80 LMTWNGLQLRKNSWQDGVRG---TNCPILPGTNW---TYRFQVKDQIGSYFYFPSLL----LQKAAGGYGAIRIYNPE-L 148 (545)
T ss_pred cEeeCCccCCCCCCcCCCCC---CcCCCCCCCcE---EEEEEeCCCCceEEEecChh----hhhhCcceeEEEEcCCc-c
Confidence 999999999877 999985 89999999999 99999966899999999974 58999999999999776 4
Q ss_pred CCCCCCCCCcCceeEEEEEeeecCCCceEecC-CCCCCCCCCCCCCccCCceEEECCcc--cCceeecC-eEEEEEEEec
Q 008840 223 APLRLPSGDVFDRPLFVFDRNFLTNGSIYMNS-TGNNPSIHPQWQPEYFGDVIVVNGKA--WPRMTVRR-RKYRFRIINA 298 (551)
Q Consensus 223 ~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~-~g~~~~~~~~~~~~~~gd~~lVNG~~--~P~~~v~~-~~~RlRllNa 298 (551)
++..++.. +.|++|+|+||.+.....+.... .|. ....+|.+||||+. .+.++|++ ++|||||+|+
T Consensus 149 ~~~p~~~~-d~e~~l~l~Dw~~~~~~~~~~~~~~g~---------~~~~~d~~liNG~~~~~~~~~v~~G~~yRlRiiNa 218 (545)
T PLN02168 149 VPVPFPKP-DEEYDILIGDWFYADHTVMRASLDNGH---------SLPNPDGILFNGRGPEETFFAFEPGKTYRLRISNV 218 (545)
T ss_pred cCcCcCcc-cceeeEEEEecCCCCHHHHHhhhhcCC---------CCCCCCEEEEeccCCCcceEEeCCCCEEEEEEEec
Confidence 44444443 78999999999765332221110 010 01247899999995 67899988 8999999999
Q ss_pred CCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCC-C--ceEEEecCCCCCCCCCCCCCCCC
Q 008840 299 SNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSEST-S--DVAILANDAPYPYPAGNPVNDAN 375 (551)
Q Consensus 299 s~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~-g--~~~~L~~~~~~~~~~g~~~~~~~ 375 (551)
|..+.+.|+| +||+|+||++||.++ +|..++.|.|++||||||+|++++.+ | +.|+|+...... . . ..
T Consensus 219 ~~~~~~~~~I-dgH~~tVIa~DG~~v-~p~~~~~l~i~~GqRydvlv~a~~~~~g~~~~Y~i~a~~~~~----~-~--~~ 289 (545)
T PLN02168 219 GLKTCLNFRI-QDHDMLLVETEGTYV-QKRVYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFT----D-A--YL 289 (545)
T ss_pred cCCceEEEEE-CCcEEEEEEECCeEC-CCceeeEEEEcCCceEEEEEEcCCCCCCCcceEEEEEEeccc----C-C--Cc
Confidence 9999999999 699999999999999 68899999999999999999998654 4 489998764211 0 0 11
Q ss_pred CceEEEEEccCCCCC--C-CCCCC----------------CCCCCCCCCCcc-------CceeeEEeeeecccCCCCcce
Q 008840 376 GKVMKFIILKNRETD--P-WRVPE----------------KLIEYPSADLSA-------ASTTRYIAMYEYTSNTGKPTH 429 (551)
Q Consensus 376 ~~vm~f~v~~~~~~~--~-~~lP~----------------~L~~~~~~~~~~-------~~~~r~~~l~~~~~~~g~~~~ 429 (551)
.....+++.+..... + +..|. .|.|..+.+.+. ....+.+.+........+...
T Consensus 290 ~~~ail~Y~~~~~~~~~p~p~~p~~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 369 (545)
T PLN02168 290 GGVALIRYPNSPLDPVGPLPLAPALHDYFSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLR 369 (545)
T ss_pred ceEEEEEECCCCCCCCCCCCCCCcccccccccchhhhhhhcCCCCCCCCCCcccccccccccceeEEecccccccCceEE
Confidence 123445554432110 0 00111 111100111110 011222222210000111346
Q ss_pred EEEcccccCCCCCCC-----------------cc-------------------eeeeEEEEeeeeeeeeeccccCceeee
Q 008840 430 LLINAKTLEDPVTET-----------------PK-------------------TLDQTELVNLEEFKACMNKINDAIKCN 473 (551)
Q Consensus 430 ~~INg~~f~~~~~~~-----------------~~-------------------~~~~~~l~n~~~~~~~~~~~~~~~~~~ 473 (551)
|.|||.+|..+.+.. +. .+.++.+.|.....|+||+|||.| .
T Consensus 370 ~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F--~ 447 (545)
T PLN02168 370 YTINGVSFVYPGTPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFYHIVFQNPLFSLESYHIDGYNF--F 447 (545)
T ss_pred EEECCCccCCCCCchhhhhhcccccccccCCCccCCCcCccccCceEEEecCCCEEEEEEeCCCCCCCCeeeCCCce--E
Confidence 899999997432111 00 033455655555579999999954 5
Q ss_pred eeeeccCCcc-----CCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccce
Q 008840 474 LSKHACGKKQ-----AVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPL 547 (551)
Q Consensus 474 v~~~~~G~~~-----~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~ 547 (551)
+.....|.-. ......+-.||||.|++++.+.|+|+.| ||| |++||||..|-..||...|
T Consensus 448 Vvg~g~g~~~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aD--------------NPG~Wl~HCHi~~~~h~g~gl~~ 513 (545)
T PLN02168 448 VVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIAMD--------------NQGMWNVRSQKAEQWYLGQELYM 513 (545)
T ss_pred EEECCCCCCCccccccCCCCCCCccceEEeCCCCEEEEEEEcc--------------CCeEEeeeecCcccceecCcEEE
Confidence 5543333210 1123567899999999999999977776 999 9999999888888777777
Q ss_pred EE
Q 008840 548 KL 549 (551)
Q Consensus 548 ~V 549 (551)
+|
T Consensus 514 ~v 515 (545)
T PLN02168 514 RV 515 (545)
T ss_pred EE
Confidence 66
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-61 Score=523.49 Aligned_cols=410 Identities=14% Similarity=0.139 Sum_probs=286.7
Q ss_pred EEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeE
Q 008840 66 LEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTV 145 (551)
Q Consensus 66 ~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~ 145 (551)
+++.+.... ..++.-...+|+|| |++|||+|++++||+|+|+++|+|++ +|+
T Consensus 31 ~~~~vt~~~--~~pdG~~r~~~~vN-----G~~PGP~I~~~~GD~v~V~V~N~L~~---------------------~tt 82 (543)
T PLN02991 31 FEWHVTYGN--ISPLGVAQQGILIN-----GKFPGPDIISVTNDNLIINVFNHLDE---------------------PFL 82 (543)
T ss_pred EEEEEEEEE--eCCCCEEEEEEEEc-----CCCCCCcEEEECCCEEEEEecCCCCC---------------------Ccc
Confidence 344344443 33444367889998 99999999999999999999999987 899
Q ss_pred EeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCC
Q 008840 146 VHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA 223 (551)
Q Consensus 146 iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~ 223 (551)
|||||+++.+. +||+|+ +||+|+||++| +|+|++.+++||||||+|.. .|..+||+|+|||++++ ++
T Consensus 83 iHWHGi~q~~~~~~DGv~~---tQcpI~PG~sf---tY~F~~~~q~GT~WYHsH~~----~q~~~Gl~G~lIV~~~~-~~ 151 (543)
T PLN02991 83 ISWSGIRNWRNSYQDGVYG---TTCPIPPGKNY---TYALQVKDQIGSFYYFPSLG----FHKAAGGFGAIRISSRP-LI 151 (543)
T ss_pred EEECCcccCCCccccCCCC---CCCccCCCCcE---EEEEEeCCCCcceEEecCcc----hhhhCCCeeeEEEeCCc-cc
Confidence 99999998654 999974 79999999999 99999966899999999984 36789999999999765 33
Q ss_pred CCCCCCCCcCceeEEEEEeeecCCCceEecC-CCCCCCCCCCCCCccCCceEEECCccc-CceeecC-eEEEEEEEecCC
Q 008840 224 PLRLPSGDVFDRPLFVFDRNFLTNGSIYMNS-TGNNPSIHPQWQPEYFGDVIVVNGKAW-PRMTVRR-RKYRFRIINASN 300 (551)
Q Consensus 224 ~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~-~g~~~~~~~~~~~~~~gd~~lVNG~~~-P~~~v~~-~~~RlRllNas~ 300 (551)
+...+. +++|++|+|+||+++....+.... .+. ....+|.++|||+.. +.++|++ ++|||||||+|.
T Consensus 152 ~~p~~~-~d~d~~i~l~DW~~~~~~~~~~~~~~~~---------~~~~~d~~liNG~~~~~~~~v~~G~~yRlRiINa~~ 221 (543)
T PLN02991 152 PVPFPA-PADDYTVLIGDWYKTNHKDLRAQLDNGG---------KLPLPDGILINGRGSGATLNIEPGKTYRLRISNVGL 221 (543)
T ss_pred Cccccc-ccceeEEEecceecCCHHHHHHHhhcCC---------CCCCCCEEEEccCCCCceEEECCCCEEEEEEEeccC
Confidence 433333 378999999999876543321111 110 123578999999964 7799998 899999999999
Q ss_pred CceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEE
Q 008840 301 ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMK 380 (551)
Q Consensus 301 ~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~ 380 (551)
.+.+.|+| +||+|+||++||.++ +|..++.|.|++||||||+|++++.+| +|+++...... + . .......
T Consensus 222 ~~~~~~~i-dgH~~tVIa~DG~~~-~p~~~~~l~i~~GQRydvlv~a~~~~~-~y~i~~~~~~~---~--~--~~~~~AI 291 (543)
T PLN02991 222 QNSLNFRI-QNHTMKLVEVEGTHT-IQTPFSSLDVHVGQSYSVLITADQPAK-DYYIVVSSRFT---S--K--ILITTGV 291 (543)
T ss_pred CeeEEEEE-CCCEEEEEEeCCccc-cceeeeEEEEcCCcEEEEEEECCCCCC-cEEEEEeeccC---C--C--CcceEEE
Confidence 99999999 699999999999998 799999999999999999999999764 78888653211 1 0 0112333
Q ss_pred EEEccCCCCCCCCCCC-----------------CCCCCCCCCCccC-------ceeeEEeeee-cccCCCCcceEEEccc
Q 008840 381 FIILKNRETDPWRVPE-----------------KLIEYPSADLSAA-------STTRYIAMYE-YTSNTGKPTHLLINAK 435 (551)
Q Consensus 381 f~v~~~~~~~~~~lP~-----------------~L~~~~~~~~~~~-------~~~r~~~l~~-~~~~~g~~~~~~INg~ 435 (551)
+++.+........+|. .|.+....+.+.. ...+.+.+.. .....| ...|.|||.
T Consensus 292 l~Y~g~~~~~~~~~p~~p~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~iN~~ 370 (543)
T PLN02991 292 LHYSNSAGPVSGPIPDGPIQLSWSFDQARAIKTNLTASGPRPNPQGSYHYGKINITRTIRLANSAGNIEG-KQRYAVNSA 370 (543)
T ss_pred EEeCCCCCCCCCCCCCCCccccccccchhhhhhcccCCCCCCCCCccccccccccceeEEEeecccccCc-eEEEEECCC
Confidence 4554432110001111 1111111111110 1122222211 000112 346899999
Q ss_pred ccCCCCCCC--------------------c------c----------eeeeEEEEeeeeeeeeeccccCceeeeeeeecc
Q 008840 436 TLEDPVTET--------------------P------K----------TLDQTELVNLEEFKACMNKINDAIKCNLSKHAC 479 (551)
Q Consensus 436 ~f~~~~~~~--------------------~------~----------~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~ 479 (551)
+|..+.+.. + . .+.++.|-|.....|+||+|||.| .+.....
T Consensus 371 s~~~p~~p~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F--~Vvg~G~ 448 (543)
T PLN02991 371 SFYPADTPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGYSF--YVVGMEL 448 (543)
T ss_pred ccCCCCCChhhhhhhcccCccccccccccCCCCccccCCcEEEcCCCCEEEEEEeCCCCCCCCeeeCCcce--EEEEeCC
Confidence 987431111 0 0 034455556556689999999965 4444333
Q ss_pred CCc-----cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 480 GKK-----QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 480 G~~-----~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
|.- .......+-.||||.|++++++.|+|+++ ||| |++||||..|.-.||...++|.+
T Consensus 449 G~f~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aD--------------NPG~W~~HCHi~~h~~~gm~~~~~v~~ 512 (543)
T PLN02991 449 GKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLD--------------NVGMWNLRSELWERQYLGQQFYMRVYT 512 (543)
T ss_pred CCCCcccccccCCCCCCcccEEEECCCCEEEEEEECC--------------CCEEeeeeeCccccccccEEEEEEecC
Confidence 321 11123457899999999999999988877 999 99999999999999998887753
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-60 Score=519.16 Aligned_cols=418 Identities=17% Similarity=0.172 Sum_probs=284.2
Q ss_pred eEEEEEEEEEEeecCCC--CCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 65 KLEIGMFEKKWKFHRDL--PPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGV 142 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~--~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~ 142 (551)
++++.+... .+.++. ....+|+|| |++|||+|++++||+|+|+++|+|++
T Consensus 29 ~y~~~v~~~--~~~pdg~~~~~~vi~vN-----Gq~PGPtI~~~~GD~v~V~V~N~L~~--------------------- 80 (596)
T PLN00044 29 YYDWEVSYV--SAAPLGGVKKQEAIGIN-----GQFPGPALNVTTNWNLVVNVRNALDE--------------------- 80 (596)
T ss_pred EEEEEEEEE--EEccCCCceeeEEEEEc-----CcCCCCcEEEECCCEEEEEEEeCCCC---------------------
Confidence 345444444 333443 235789997 99999999999999999999999997
Q ss_pred CeEEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 143 PTVVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 143 ~t~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|+|||||+++... +||++. +||+|+||++| +|+|.+.+++||||||+|.. .|+.+||+|+|||++++
T Consensus 81 ~ttIHWHGl~q~~t~w~DGv~~---TQcPI~PG~sf---tY~F~~~dq~GT~WYHsH~~----~Q~~~Gl~GalII~~~~ 150 (596)
T PLN00044 81 PLLLTWHGVQQRKSAWQDGVGG---TNCAIPAGWNW---TYQFQVKDQVGSFFYAPSTA----LHRAAGGYGAITINNRD 150 (596)
T ss_pred CccEEECCccCCCCccccCCCC---CcCCcCCCCcE---EEEEEeCCCCceeEeeccch----hhhhCcCeeEEEEcCcc
Confidence 89999999998754 999863 89999999999 99999966899999999973 68999999999999765
Q ss_pred CCCCCCCCCCCcCceeEEEEEeeecCCCceEec-CCCCCCCCCCCCCCccCCceEEECCc--------------ccCcee
Q 008840 221 VEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMN-STGNNPSIHPQWQPEYFGDVIVVNGK--------------AWPRMT 285 (551)
Q Consensus 221 ~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~-~~g~~~~~~~~~~~~~~gd~~lVNG~--------------~~P~~~ 285 (551)
..+..++...++|.+|+|+||+......+... ..|.. ....|.++|||+ ..+.++
T Consensus 151 -~~~~P~~~~~~~e~~i~l~DW~~~~~~~~~~~l~~g~~---------~~~~d~~lING~g~~~~n~~~~~~~~~~~~i~ 220 (596)
T PLN00044 151 -VIPIPFGFPDGGDITLFIADWYARDHRALRRALDAGDL---------LGAPDGVLINAFGPYQYNDSLVPPGITYERIN 220 (596)
T ss_pred -cccccccCCcccceEEEecccccCCHHHHHHHHhcCCC---------CCCCCceEEcccCccccCCccccCCCccceEE
Confidence 33333222224799999999976543332110 11110 012466777775 234688
Q ss_pred ecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCC
Q 008840 286 VRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYP 364 (551)
Q Consensus 286 v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~ 364 (551)
|++ ++|||||||+|..+.+.|+| +||+|+||++||.++ +|+.++.|.|++||||||+|++++.++++|+|+......
T Consensus 221 V~~Gk~yRlRiINaa~~~~~~fsI-dgH~mtVIa~DG~~v-~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~a~~~~~ 298 (596)
T PLN00044 221 VDPGKTYRFRVHNVGVATSLNFRI-QGHNLLLVEAEGSYT-SQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFV 298 (596)
T ss_pred ECCCCEEEEEEEEccCCceEEEEE-CCCEEEEEEeCCccc-CceeeeeEEEcCCceEEEEEECCCCCCCceEEEEecccc
Confidence 998 89999999999999999999 699999999999999 899999999999999999999999866589998643111
Q ss_pred CCCCCCCCCCCCceEEEEEccCCCC--CC-CCCCC-------------CCCCCCC----CCCccCceee-EEeee-----
Q 008840 365 YPAGNPVNDANGKVMKFIILKNRET--DP-WRVPE-------------KLIEYPS----ADLSAASTTR-YIAMY----- 418 (551)
Q Consensus 365 ~~~g~~~~~~~~~vm~f~v~~~~~~--~~-~~lP~-------------~L~~~~~----~~~~~~~~~r-~~~l~----- 418 (551)
.. +. .........+++.+.... .+ +..|. .++..+. .+.++...+. .+.+.
T Consensus 299 ~~-~~--~~~~~~~AIl~Y~~~~~~~~~~~P~~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 375 (596)
T PLN00044 299 DA-AV--VDKLTGVAILHYSNSQGPASGPLPDAPDDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLL 375 (596)
T ss_pred cC-cc--ccCcceeEEEEECCCCCCCCCCCCCCCcccCCchhhhhhhHhhhhccCCCcCCCCCcccceeeEEeeeeeeee
Confidence 00 10 111122344555443210 10 11121 1110000 0011110111 11111
Q ss_pred -ecccCC-CCcceEEEcccccCCCCCCC----------------cc-------------------eeeeEEEEeeeeeee
Q 008840 419 -EYTSNT-GKPTHLLINAKTLEDPVTET----------------PK-------------------TLDQTELVNLEEFKA 461 (551)
Q Consensus 419 -~~~~~~-g~~~~~~INg~~f~~~~~~~----------------~~-------------------~~~~~~l~n~~~~~~ 461 (551)
...... .+...|+|||.+|..+.+.. |. .++++.+-|.....|
T Consensus 376 ~~~~~~~~~g~~~~s~Nnvsf~~p~~p~L~a~~~~~~gv~~~~fp~~pp~~~~~~~t~v~~~~~n~~VeiV~qn~~~~~H 455 (596)
T PLN00044 376 QSMAPELIDGKLRATLNEISYIAPSTPLMLAQIFNVPGVFKLDFPNHPMNRLPKLDTSIINGTYKGFMEIIFQNNATNVQ 455 (596)
T ss_pred ccccccccCCeEEEEECcccCCCCCCcchhhhhccCCCcccCCCCCCCCccccccCceEEEcCCCCEEEEEEeCCCCCCC
Confidence 000000 11356899999987532111 00 034445555445579
Q ss_pred eeccccCceeeeeeeeccCCc-----cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecc
Q 008840 462 CMNKINDAIKCNLSKHACGKK-----QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHI 535 (551)
Q Consensus 462 ~~~~~~~~~~~~v~~~~~G~~-----~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHi 535 (551)
+||+|||.| -|.....|.- ......++-.||||.|++|+++.|+|+.| ||| |.+||||
T Consensus 456 P~HLHGh~F--~Vvg~G~G~~~~~~~~~~Nl~nPp~RdTv~vp~~gW~aIRF~aD--------------NPG~W~lHCH~ 519 (596)
T PLN00044 456 SYHLDGYAF--FVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWTAILVFLD--------------NAGIWNLRVEN 519 (596)
T ss_pred CeeEcCccE--EEEeecCCCCCCCcccccccCCCCccceEEeCCCCeEEEEEecC--------------CCEEehhhccC
Confidence 999999965 3444333421 11234557899999999999999988776 999 9999999
Q ss_pred ccccccCcccceEEcC
Q 008840 536 LDHEDNIMMRPLKLIK 551 (551)
Q Consensus 536 L~HED~GMM~~~~V~~ 551 (551)
++|...||...|.|.+
T Consensus 520 ~~h~~~Gm~~~~~v~~ 535 (596)
T PLN00044 520 LDAWYLGQEVYINVVN 535 (596)
T ss_pred chhhcccCcEEEEEec
Confidence 9999999999998753
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-60 Score=516.10 Aligned_cols=413 Identities=14% Similarity=0.145 Sum_probs=288.6
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+...... ++.-...+|+|| |++|||+|++++||+|+|+++|+|++ +|
T Consensus 18 ~~~~~vt~~~~~--pdg~~~~~~~vN-----Gq~PGP~I~~~~GD~v~V~v~N~L~~---------------------~t 69 (536)
T PLN02792 18 FYNWRVTYGNIS--LLTLPRRGILIN-----GQFPGPEIRSLTNDNLVINVHNDLDE---------------------PF 69 (536)
T ss_pred EEEEEEEEEEeC--CCCeEEEEEEEC-----CCCCCCcEEEECCCEEEEEEEeCCCC---------------------Cc
Confidence 445544454333 333357889998 99999999999999999999999997 89
Q ss_pred EEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCC
Q 008840 145 VVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVE 222 (551)
Q Consensus 145 ~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~ 222 (551)
+|||||+++... +||++. +||+|+||++| +|+|++.+++||||||+|.. .|..+||+|++||++++ +
T Consensus 70 tiHWHGl~q~~~~~~DGv~~---tqcPI~PG~sf---tY~F~~~~q~GT~WYHsH~~----~q~~~Gl~G~liI~~~~-~ 138 (536)
T PLN02792 70 LLSWNGVHMRKNSYQDGVYG---TTCPIPPGKNY---TYDFQVKDQVGSYFYFPSLA----VQKAAGGYGSLRIYSLP-R 138 (536)
T ss_pred CEeCCCcccCCCCccCCCCC---CcCccCCCCcE---EEEEEeCCCccceEEecCcc----hhhhcccccceEEeCCc-c
Confidence 999999999876 999864 78999999999 99999966899999999973 58899999999998644 3
Q ss_pred CCCCCCCCCcCceeEEEEEeeecCCCceEec-CCCCCCCCCCCCCCccCCceEEECCcc---cCceeecC-eEEEEEEEe
Q 008840 223 APLRLPSGDVFDRPLFVFDRNFLTNGSIYMN-STGNNPSIHPQWQPEYFGDVIVVNGKA---WPRMTVRR-RKYRFRIIN 297 (551)
Q Consensus 223 ~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~-~~g~~~~~~~~~~~~~~gd~~lVNG~~---~P~~~v~~-~~~RlRllN 297 (551)
.+..++. ++.|++|+|+||+.+..+.+... ..|. .....+|.+||||+. .+.++|++ ++|||||+|
T Consensus 139 ~~~p~~~-~d~e~~i~l~Dw~~~~~~~~~~~~~~g~--------~~~~~~d~~liNG~~~~~~~~~~v~~Gk~yRlRliN 209 (536)
T PLN02792 139 IPVPFPE-PAGDFTFLIGDWYRRNHTTLKKILDGGR--------KLPLMPDGVMINGQGVSYVYSITVDKGKTYRFRISN 209 (536)
T ss_pred cCcCCCc-ccceeEEEecccccCCHHHHHHHhhccC--------cCCCCCCEEEEeccCCCCcceEEECCCCEEEEEEEE
Confidence 3343444 37799999999987654443211 1111 112357999999995 46689988 899999999
Q ss_pred cCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCc
Q 008840 298 ASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGK 377 (551)
Q Consensus 298 as~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~ 377 (551)
+|..+.+.|+| +||+|+||++||+++ +|..++.|.|+|||||||+|++++.+ ++|+|+...... +. . ...
T Consensus 210 a~~~~~~~f~i-~gH~~tVI~~DG~~v-~p~~~~~l~i~~GqRydVlV~a~~~~-g~Y~i~a~~~~~---~~--~--~~~ 279 (536)
T PLN02792 210 VGLQTSLNFEI-LGHQLKLIEVEGTHT-VQSMYTSLDIHVGQTYSVLVTMDQPP-QNYSIVVSTRFI---AA--K--VLV 279 (536)
T ss_pred cCCCceEEEEE-CCcEEEEEEeCCccC-CCcceeEEEEccCceEEEEEEcCCCC-ceEEEEEEeccC---CC--C--Cce
Confidence 99999999999 699999999999999 78889999999999999999999865 489988764211 10 1 112
Q ss_pred eEEEEEccCCCCCC--CCCCC----------------CCCCCCCCCCccC-------ceeeEEeeeecccCCCCcceEEE
Q 008840 378 VMKFIILKNRETDP--WRVPE----------------KLIEYPSADLSAA-------STTRYIAMYEYTSNTGKPTHLLI 432 (551)
Q Consensus 378 vm~f~v~~~~~~~~--~~lP~----------------~L~~~~~~~~~~~-------~~~r~~~l~~~~~~~g~~~~~~I 432 (551)
...+++.+.....+ +.+|. .|.+..+.+.++. ...+.+.+.......+....|.|
T Consensus 280 ~ail~Y~g~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 359 (536)
T PLN02792 280 SSTLHYSNSKGHKIIHARQPDPDDLEWSIKQAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAI 359 (536)
T ss_pred EEEEEECCCCCCCCCCCCCCCcCCccccccchhhhhhccCCCCCCCCCCcccccceeccceeEEecccccccCceeEEEE
Confidence 33445544321100 11110 0110000011100 01122222111011112346889
Q ss_pred cccccCCCCCCC-----------------cc--------------------eeeeEEEEeeeeeeeeeccccCceeeeee
Q 008840 433 NAKTLEDPVTET-----------------PK--------------------TLDQTELVNLEEFKACMNKINDAIKCNLS 475 (551)
Q Consensus 433 Ng~~f~~~~~~~-----------------~~--------------------~~~~~~l~n~~~~~~~~~~~~~~~~~~v~ 475 (551)
||.+|..+.+.. +. .+.+..|-|.....|+||+|||.| .+.
T Consensus 360 N~~s~~~p~~p~L~a~~~~~~g~~~~~~~~~~p~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~~HP~HLHGh~F--~Vv 437 (536)
T PLN02792 360 NGVSFVPSDTPLKLADHFKIKGVFKVGSIPDKPRRGGGMRLDTSVMGAHHNAFLEIIFQNREKIVQSYHLDGYNF--WVV 437 (536)
T ss_pred CCcccCCCCCchhhhhhhccCCCcCcccCccCCcccCCCccCceEEEcCCCCEEEEEEECCCCCCCCeeeCCCce--EEE
Confidence 999887421100 00 034455555555679999999955 454
Q ss_pred eeccCCc-----cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 476 KHACGKK-----QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 476 ~~~~G~~-----~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
....|.- .......+-.||||.|++++++.|+|+.| ||| |++||||..|...||...|.|
T Consensus 438 g~G~G~~~~~~~~~~Nl~nP~~RdTv~v~~~gw~aIRf~aD--------------NPGvW~~HCh~~~h~~~Gm~~~~~v 503 (536)
T PLN02792 438 GINKGIWSRASRREYNLKDAISRSTTQVYPESWTAVYVALD--------------NVGMWNLRSQFWARQYLGQQFYLRV 503 (536)
T ss_pred eecCCCCCcccccccCcCCCCccceEEECCCCEEEEEEEee--------------CCEEEeeeEcchhccccceEEEEEE
Confidence 4333321 11123457899999999999999988887 999 999999999999999999987
Q ss_pred cC
Q 008840 550 IK 551 (551)
Q Consensus 550 ~~ 551 (551)
.+
T Consensus 504 ~~ 505 (536)
T PLN02792 504 YS 505 (536)
T ss_pred cc
Confidence 53
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-60 Score=520.98 Aligned_cols=412 Identities=21% Similarity=0.237 Sum_probs=280.3
Q ss_pred EEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeE
Q 008840 66 LEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTV 145 (551)
Q Consensus 66 ~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~ 145 (551)
+++.+.+. ...++.....+|+|| |++|||+|++++||+|+|+++|+|... +|+
T Consensus 4 y~~~vt~~--~~~pdG~~~~~~~~N-----g~~pGP~i~~~~Gd~v~v~v~N~l~~~--------------------~t~ 56 (541)
T TIGR03388 4 YKWEVEYE--FWSPDCFEKLVIGIN-----GQFPGPTIRAQAGDTIVVELTNKLHTE--------------------GVV 56 (541)
T ss_pred EEEEEEEE--EecCCCeEeeEEEEC-----CcCCCCeEEEEcCCEEEEEEEECCCCC--------------------Ccc
Confidence 44444454 344555578899998 999999999999999999999999642 799
Q ss_pred EeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCC
Q 008840 146 VHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA 223 (551)
Q Consensus 146 iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~ 223 (551)
|||||+++.+. +||+|+ ++||+|+||++| +|+|+++ ++||||||||. ..|+++||+|+|||+++. ++
T Consensus 57 iHwHGl~~~~~~~~DG~~~--vtq~~I~PG~s~---~y~f~~~-~~Gt~wyH~H~----~~q~~~Gl~G~liV~~~~-~~ 125 (541)
T TIGR03388 57 IHWHGIRQIGTPWADGTAG--VTQCAINPGETF---IYNFVVD-RPGTYFYHGHY----GMQRSAGLYGSLIVDVPD-GE 125 (541)
T ss_pred EEecCcCCcCCcccCCCCc--cccCCcCCCCEE---EEEEEcC-CCEEEEEEecc----hHHhhccceEEEEEecCC-CC
Confidence 99999998654 899998 899999999999 9999996 89999999998 358999999999999765 22
Q ss_pred CCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcc-----------------------
Q 008840 224 PLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA----------------------- 280 (551)
Q Consensus 224 ~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~----------------------- 280 (551)
+. |..+++|++|+|+||..+...+...... ..+ ..| ...++.++|||+.
T Consensus 126 ~~--p~~~d~e~~l~l~Dw~~~~~~~~~~~~~-~~~---~~~--~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~ 197 (541)
T TIGR03388 126 KE--PFHYDGEFNLLLSDWWHKSIHEQEVGLS-SKP---MRW--IGEPQSLLINGRGQFNCSLAAKFSSTNLPQCNLKGN 197 (541)
T ss_pred CC--CccccceEEEEeecccCCCHHHHHhhcc-cCC---CcC--CCCCcceEECCCCCCCCccccccCccccchhhccCC
Confidence 22 2224889999999997654322111100 000 001 0234677888862
Q ss_pred ---cC-ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceE
Q 008840 281 ---WP-RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVA 355 (551)
Q Consensus 281 ---~P-~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~ 355 (551)
.| .++|++ ++|||||||+|..+.+.|+| +||+|+|||+||+++ +|+.++.|.|+|||||||+|++++.++++|
T Consensus 198 ~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i-d~h~~~VIa~DG~~v-~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y 275 (541)
T TIGR03388 198 EQCAPQILHVEPGKTYRLRIASTTALAALNFAI-EGHKLTVVEADGNYV-EPFTVKDIDIYSGETYSVLLTTDQDPSRNY 275 (541)
T ss_pred CCCCceEEEECCCCEEEEEEEcccccceEEEEE-CCCEEEEEEeCCEec-ccceeCeEEecCCCEEEEEEeCCCCCCCcE
Confidence 23 378987 89999999999999999999 699999999999999 899999999999999999999988766689
Q ss_pred EEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCC-C----CCCCC----------CCCCCCC--C--CCccCceeeEEe
Q 008840 356 ILANDAPYPYPAGNPVNDANGKVMKFIILKNRETD-P----WRVPE----------KLIEYPS--A--DLSAASTTRYIA 416 (551)
Q Consensus 356 ~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~-~----~~lP~----------~L~~~~~--~--~~~~~~~~r~~~ 416 (551)
+|+..... ... ........+++.+..... + ...|. .+..+.. . +...+.++..+.
T Consensus 276 ~ira~~~~-----~~~-~~~~~~aiL~Y~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (541)
T TIGR03388 276 WISVGVRG-----RKP-NTPPGLTVLNYYPNSPSRLPPTPPPVTPAWDDFDRSKAFSLAIKAAMGSPKPPETSDRRIVLL 349 (541)
T ss_pred EEEEeccc-----CCC-CCccEEEEEEECCCCCCCCCCCCCCCCCCccccchhhccchhhhccccCCCCCCCCCcEEEEe
Confidence 99875321 100 011223444554322111 0 00110 0111110 0 111122222222
Q ss_pred eeecccCCCCcceEEEcccccCCCCCC-----------------C-------------------c----------ceeee
Q 008840 417 MYEYTSNTGKPTHLLINAKTLEDPVTE-----------------T-------------------P----------KTLDQ 450 (551)
Q Consensus 417 l~~~~~~~g~~~~~~INg~~f~~~~~~-----------------~-------------------~----------~~~~~ 450 (551)
+.. ........|.+||.+|..+... . . ..+++
T Consensus 350 ~~~--~~~~~~~~~~~n~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Vd 427 (541)
T TIGR03388 350 NTQ--NKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVD 427 (541)
T ss_pred ccC--cccCceEEEEECcccCCCCCccHHHHHhhcCCccccCCCCcccccccccccCCCcccccccCceEEEecCCCeEE
Confidence 221 1111234589999988522110 0 0 00334
Q ss_pred EEEEeee------eeeeeeccccCceeeeeeeeccCCc------cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCC
Q 008840 451 TELVNLE------EFKACMNKINDAIKCNLSKHACGKK------QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANAS 518 (551)
Q Consensus 451 ~~l~n~~------~~~~~~~~~~~~~~~~v~~~~~G~~------~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~ 518 (551)
..|.|.. ...|+||+|+|.| .+.....|.- .......+..||||.|++++++.|+|+.+
T Consensus 428 ivi~n~~~~~~~~~~~HP~HLHGh~F--~vlg~g~g~~~~~~~~~~~n~~nP~~RDTv~vp~~gwvvIRF~ad------- 498 (541)
T TIGR03388 428 VILQNANTLNGNNSETHPWHLHGHDF--WVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVAD------- 498 (541)
T ss_pred EEEECCccccCCCCCCCcEEecCCce--EEEeeccCCCCcccCcccccCCCCCEeceEEeCCCceEEEEEECC-------
Confidence 4455542 3469999999955 4544333320 01122346789999999999999977766
Q ss_pred CCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 519 YPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 519 ~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
||| |+|||||++|...||+..|..
T Consensus 499 -------NPG~W~~HCHi~~H~~~GM~~~~~e 523 (541)
T TIGR03388 499 -------NPGVWAFHCHIEPHLHMGMGVVFAE 523 (541)
T ss_pred -------CCeEeeeeccchhhhhcccEEEEec
Confidence 899 999999999999999998854
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-60 Score=520.04 Aligned_cols=412 Identities=17% Similarity=0.195 Sum_probs=284.4
Q ss_pred EEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeE
Q 008840 66 LEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTV 145 (551)
Q Consensus 66 ~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~ 145 (551)
+++.+.+..+..+ +. ...+|+|| |++|||+|++++||+|+|+++|+|+.. +|+
T Consensus 11 ~~l~v~~~~~~~~-g~-~r~~~~~N-----G~~PGP~I~~~~GD~v~V~v~N~L~~~--------------------~tt 63 (538)
T TIGR03390 11 HILRVTSDNIKIA-CS-SRYSVVVN-----GTSPGPEIRLQEGQTTWIRVYNDIPDN--------------------NVT 63 (538)
T ss_pred EEEEEEEeEeccC-Ce-EEEEEEEC-----CcCCCCeEEEeCCCEEEEEEEECCCCC--------------------Cce
Confidence 3444445544432 33 56789997 999999999999999999999999842 799
Q ss_pred EeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcC-ccCceeEEeccCCCchhhhhhccceEEEEEeCCCCC
Q 008840 146 VHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNM-QQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVE 222 (551)
Q Consensus 146 iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~-~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~ 222 (551)
|||||+++... +||+|+ +|||+|.||++| +|+|++. +++||||||+|.. .|. .||+|+|||++++ +
T Consensus 64 iHwHGi~~~~~~~~DGvp~--vTQcpI~PG~sf---~Y~f~~~~~q~GT~WYHsH~~----~Q~-~~l~G~lIV~~~~-~ 132 (538)
T TIGR03390 64 MHWHGLTQRTAPFSDGTPL--ASQWPIPPGHFF---DYEIKPEPGDAGSYFYHSHVG----FQA-VTAFGPLIVEDCE-P 132 (538)
T ss_pred EECCCCCCCCCCCCCCCcc--cccCCCCCCCcE---EEEEEecCCCCeeeEEecCCc----hhh-hcceeEEEEccCC-c
Confidence 99999998654 999998 999999999999 9999974 5899999999984 364 4699999999765 3
Q ss_pred CCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcc----------------cCceee
Q 008840 223 APLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA----------------WPRMTV 286 (551)
Q Consensus 223 ~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~----------------~P~~~v 286 (551)
.++ .+++|++|+|+||++..++++....... + ..| ....+.++|||+. .|.++|
T Consensus 133 ~~~----~~d~e~~l~l~Dw~~~~~~~~~~~~~~~-~---~~~--~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~v 202 (538)
T TIGR03390 133 PPY----KYDDERILLVSDFFSATDEEIEQGLLST-P---FTW--SGETEAVLLNGKSGNKSFYAQINPSGSCMLPVIDV 202 (538)
T ss_pred cCC----CccCcEEEEEeCCCCCCHHHHHhhhhcc-C---Ccc--CCCCceEEECCccccccccccccCCCCCcceEEEE
Confidence 222 2478999999999887665542111000 0 011 1235789999995 367889
Q ss_pred cC-eEEEEEEEecCCCceEEEEEcCCce-EEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCC------CceEEEe
Q 008840 287 RR-RKYRFRIINASNARFFRFFFTNGLR-FIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSEST------SDVAILA 358 (551)
Q Consensus 287 ~~-~~~RlRllNas~~~~~~l~l~~g~~-~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~------g~~~~L~ 358 (551)
++ ++|||||||+|..+.+.|+| +||+ |+||++||.++ +|+.++.|.|++||||||+|++++.. .+.|+|+
T Consensus 203 ~~G~~yRlRlINa~~~~~~~~~i-dgH~~~~VIa~DG~~~-~P~~v~~l~l~~GqRydVlv~~~~~~~~~~~~~~~Y~ir 280 (538)
T TIGR03390 203 EPGKTYRLRFIGATALSLISLGI-EDHENLTIIEADGSYT-KPAKIDHLQLGGGQRYSVLFKAKTEDELCGGDKRQYFIQ 280 (538)
T ss_pred CCCCEEEEEEEccCCceEEEEEE-CCCCeEEEEEeCCCCC-CceEeCeEEEccCCEEEEEEECCCccccccCCCCcEEEE
Confidence 88 89999999999999999999 6999 99999999976 89999999999999999999999752 2589998
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCC----------------CCCCCCCCC-----CCccCceeeEEee
Q 008840 359 NDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVP----------------EKLIEYPSA-----DLSAASTTRYIAM 417 (551)
Q Consensus 359 ~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP----------------~~L~~~~~~-----~~~~~~~~r~~~l 417 (551)
..... . ... ......+++.+......+..| ..|.|+.+. +. .....+.+.+
T Consensus 281 ~~~~~-~----~~~--~~~~aiL~Y~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~pl~~~~~~~~~~-~~~~d~~~~l 352 (538)
T TIGR03390 281 FETRD-R----PKV--YRGYAVLRYRSDKASKLPSVPETPPLPLPNSTYDWLEYELEPLSEENNQDFPT-LDEVTRRVVI 352 (538)
T ss_pred EeecC-C----CCc--ceEEEEEEeCCCCCCCCCCCCCCCCCCccCcchhhhheeeEecCccccCCCCC-CCcCceEEEE
Confidence 75321 0 000 112333455322111111011 012232211 11 1112334433
Q ss_pred eecccC--CCCcceEEEcccccCCC--CCC------------------------Ccc----------eeeeEEEEeee--
Q 008840 418 YEYTSN--TGKPTHLLINAKTLEDP--VTE------------------------TPK----------TLDQTELVNLE-- 457 (551)
Q Consensus 418 ~~~~~~--~g~~~~~~INg~~f~~~--~~~------------------------~~~----------~~~~~~l~n~~-- 457 (551)
.-.... ......|+|||.+|..+ .+. ... .+.++.|.|..
T Consensus 353 ~~~~~~~~~~g~~~~~~N~~s~~~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ivi~n~~~~ 432 (538)
T TIGR03390 353 DAHQNVDPLNGRVAWLQNGLSWTESVRQTPYLVDIYENGLPATPNYTAALANYGFDPETRAFPAKVGEVLEIVWQNTGSY 432 (538)
T ss_pred EccccccccCCeEEEEECCcccCCCCCCCchHHHHhcCCCCcCCCcccccccCCcCcCceEEEcCCCCEEEEEEECCccc
Confidence 222111 11235699999998631 000 000 03445555543
Q ss_pred ------eeeeeeccccCceeeeeeeeccCCcc------CCCCcCCCcCccEEeC----------CCcEEEEEEEEecccc
Q 008840 458 ------EFKACMNKINDAIKCNLSKHACGKKQ------AVPVHEQGWKNVYKIT----------PGYVTRILVRFSYVHA 515 (551)
Q Consensus 458 ------~~~~~~~~~~~~~~~~v~~~~~G~~~------~~~~~e~~wkDTV~v~----------pg~~v~i~~~f~~~~~ 515 (551)
...|+||+|||.| .+.....|.-. ......+-.||||.|+ +++++.|+++++
T Consensus 433 ~~~~~~~~~HP~HlHGh~F--~vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~~~~~~~~~~~~~~~ir~~~d---- 506 (538)
T TIGR03390 433 TGPNGGVDTHPFHAHGRHF--YDIGGGDGEYNATANEAKLENYTPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVT---- 506 (538)
T ss_pred ccCCCCCCCCCeeecCCcE--EEEcccccccCCccChhhhccCCCCeecceeeccccccccccCCCceEEEEEEcC----
Confidence 3579999999955 44443333210 0112356799999995 789999988877
Q ss_pred CCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 516 NASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 516 ~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
||| |++||||.+|...||+..|.|.+
T Consensus 507 ----------NPG~W~~HCHi~~H~~~Gm~~~~~~~~ 533 (538)
T TIGR03390 507 ----------NPGVWMMHCHILQHMVMGMQTVWVFGD 533 (538)
T ss_pred ----------CCeeEEEeccchhhhhccceEEEEeCC
Confidence 899 99999999999999999999864
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-59 Score=516.63 Aligned_cols=414 Identities=20% Similarity=0.223 Sum_probs=277.8
Q ss_pred EEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeE
Q 008840 66 LEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTV 145 (551)
Q Consensus 66 ~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~ 145 (551)
+++.+.... ..++.-...+|+|| |++|||+|++++||+|+|+++|+|... +|+
T Consensus 27 y~~~vt~~~--~~pdG~~r~~~~~N-----g~~pgP~i~~~~Gd~v~v~v~N~l~~~--------------------~~~ 79 (566)
T PLN02604 27 YKWEVKYEY--KSPDCFKKLVITIN-----GRSPGPTILAQQGDTVIVELKNSLLTE--------------------NVA 79 (566)
T ss_pred EEEEEEEEE--ECCCCceeeEEEEC-----CccCCCcEEEECCCEEEEEEEeCCCCC--------------------CCC
Confidence 444444442 33455467899998 999999999999999999999998532 799
Q ss_pred EeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCC
Q 008840 146 VHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA 223 (551)
Q Consensus 146 iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~ 223 (551)
|||||+++.+. +||+++ ++||+|.||+++ +|+|+++ ++||||||||.. .|+.+||+|+|||++++ +.
T Consensus 80 iH~HG~~~~~~~~~DG~~~--~tq~~i~pg~s~---~y~f~~~-~~Gt~wyH~H~~----~q~~~Gl~G~liV~~~~-~~ 148 (566)
T PLN02604 80 IHWHGIRQIGTPWFDGTEG--VTQCPILPGETF---TYEFVVD-RPGTYLYHAHYG----MQREAGLYGSIRVSLPR-GK 148 (566)
T ss_pred EEeCCCCCCCCccccCCCc--cccCccCCCCeE---EEEEEcC-CCEEEEEeeCcH----HHHhCCCeEEEEEEecC-CC
Confidence 99999997654 899998 799999999999 9999996 899999999973 58899999999999765 22
Q ss_pred CCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCc------------------------
Q 008840 224 PLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGK------------------------ 279 (551)
Q Consensus 224 ~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~------------------------ 279 (551)
+. |..+++|.+|+|+||+.....+....... .+. .| ...++.++|||+
T Consensus 149 ~~--p~~~d~d~~l~l~Dw~~~~~~~~~~~~~~-~~~---~~--~~~~d~~liNG~G~~~~~~~~~~~~~~~~~~~~~~~ 220 (566)
T PLN02604 149 SE--PFSYDYDRSIILTDWYHKSTYEQALGLSS-IPF---DW--VGEPQSLLIQGKGRYNCSLVSSPYLKAGVCNATNPE 220 (566)
T ss_pred CC--ccccCcceEEEeeccccCCHHHHHHhhcc-CCC---cc--CCCCCceEEcCCCCCCCccccCccccccccccCCCC
Confidence 22 22247899999999976543222111100 000 00 012456666664
Q ss_pred cc-CceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEE
Q 008840 280 AW-PRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAIL 357 (551)
Q Consensus 280 ~~-P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L 357 (551)
.. +.++|++ ++|||||||+|..+.+.|+| +||+|+|||+||.++ +|++++.|.|++||||||+|++++.+|++|+|
T Consensus 221 ~~~~~~~v~~g~~~RlRlINa~~~~~~~~si-dgH~~~VIa~DG~~v-~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~i 298 (566)
T PLN02604 221 CSPYVLTVVPGKTYRLRISSLTALSALSFQI-EGHNMTVVEADGHYV-EPFVVKNLFIYSGETYSVLVKADQDPSRNYWV 298 (566)
T ss_pred CCceEEEecCCCEEEEEEEeccccceEEEEE-CCCEEEEEEeCCEec-ccceeeeEEEccCCeEEEEEECCCCCCCCEEE
Confidence 12 2578887 89999999999999999999 699999999999999 79999999999999999999999876668999
Q ss_pred ecCCCCCCCCCCCCCCCCCceEEEEEccCCC-C-CCCCCCC--CCCC----------CC---C-CCCccCceeeEEeeee
Q 008840 358 ANDAPYPYPAGNPVNDANGKVMKFIILKNRE-T-DPWRVPE--KLIE----------YP---S-ADLSAASTTRYIAMYE 419 (551)
Q Consensus 358 ~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~-~-~~~~lP~--~L~~----------~~---~-~~~~~~~~~r~~~l~~ 419 (551)
+...... .........| +++.+... . .+...|. .+.. ++ . .........+.+.+..
T Consensus 299 ra~~~~~----~~~~~~~~aI--L~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 372 (566)
T PLN02604 299 TTSVVSR----NNTTPPGLAI--FNYYPNHPRRSPPTVPPSGPLWNDVEPRLNQSLAIKARHGYIHPPPLTSDRVIVLLN 372 (566)
T ss_pred EEecccC----CCCCcceeEE--EEECCCCCCCCCCCCCCCCCcccccchhhcchhcccccccCcCCCCCCCCeEEEEec
Confidence 8643211 0001112234 44433210 0 0101110 0000 00 0 0001111123333221
Q ss_pred cccCCCCcceEEEcccccCCCCCC-------------------------------------Cc----------ceeeeEE
Q 008840 420 YTSNTGKPTHLLINAKTLEDPVTE-------------------------------------TP----------KTLDQTE 452 (551)
Q Consensus 420 ~~~~~g~~~~~~INg~~f~~~~~~-------------------------------------~~----------~~~~~~~ 452 (551)
.....+....|.|||..|..+... .. ..+.+..
T Consensus 373 ~~~~~~~~~~w~in~~~~~~p~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdiv 452 (566)
T PLN02604 373 TQNEVNGYRRWSVNNVSFNLPHTPYLIALKENLTGAFDQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDII 452 (566)
T ss_pred cccccCCeEEEEECcccCCCCCCchhHhhhhcCCCcccCCCCCcccccccccccCCccccccccCceEEEccCCCeEEEE
Confidence 111111234699999988531100 00 0133445
Q ss_pred EEeee------eeeeeeccccCceeeeeeeeccCCc------cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCC
Q 008840 453 LVNLE------EFKACMNKINDAIKCNLSKHACGKK------QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYP 520 (551)
Q Consensus 453 l~n~~------~~~~~~~~~~~~~~~~v~~~~~G~~------~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p 520 (551)
+.|.. ...|+||+|||.| .+.....|.- .......+..||||.|++++++.|+|+++
T Consensus 453 i~n~~~~~~~~~~~HP~HLHGH~F--~Vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~gwvvIRF~aD--------- 521 (566)
T PLN02604 453 LQNANTMNANNSETHPWHLHGHDF--WVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRAD--------- 521 (566)
T ss_pred EECCccccCCCCCCCCEEecCCce--EEEEecCCCCCccccccccCCCCCCccceEEeCCCceEEEEEECC---------
Confidence 55543 2359999999955 4444333320 01122346789999999999999988776
Q ss_pred CCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 521 FDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 521 ~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
||| |++||||++|...|||..|.+
T Consensus 522 -----NPG~WlfHCHI~~Hl~~GM~~v~~e 546 (566)
T PLN02604 522 -----NPGVWAFHCHIESHFFMGMGVVFEE 546 (566)
T ss_pred -----CCeEeeEeecchhHhhcCCEEEEee
Confidence 899 999999999999999998864
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-59 Score=510.42 Aligned_cols=418 Identities=19% Similarity=0.211 Sum_probs=279.2
Q ss_pred EEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeE
Q 008840 66 LEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTV 145 (551)
Q Consensus 66 ~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~ 145 (551)
+++.+.... +.++.-...+|+|| |++|||+||+++||+|+|+++|+|+.. +|+
T Consensus 26 ~~~~vt~~~--~~pdG~~~~v~~vN-----g~~pGP~i~~~~Gd~v~v~v~N~l~~~--------------------~ts 78 (574)
T PLN02191 26 YTWEVEYKY--WWPDCKEGAVMTVN-----GQFPGPTIDAVAGDTIVVHLTNKLTTE--------------------GLV 78 (574)
T ss_pred EEEEEEEEE--eccCCceeeEEEEC-----CcCCCCeEEEEcCCEEEEEEEECCCCC--------------------Ccc
Confidence 444444443 34454478899997 999999999999999999999999852 799
Q ss_pred EeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCC
Q 008840 146 VHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA 223 (551)
Q Consensus 146 iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~ 223 (551)
|||||+++.+. +||+|+ ++||+|+||++| +|+|+++ ++||||||||. ..|+.+||+|+|||+++. +.
T Consensus 79 iHwHGl~~~~~~~~DGv~g--vtq~pI~PG~s~---~Y~f~~~-~~GT~wYHsH~----~~q~~~Gl~G~liV~~~~-~~ 147 (574)
T PLN02191 79 IHWHGIRQKGSPWADGAAG--VTQCAINPGETF---TYKFTVE-KPGTHFYHGHY----GMQRSAGLYGSLIVDVAK-GP 147 (574)
T ss_pred EECCCCCCCCCccccCCCc--cccCCcCCCCeE---EEEEECC-CCeEEEEeeCc----HHHHhCCCEEEEEEccCC-CC
Confidence 99999999875 999999 899999999999 9999996 89999999997 358999999999998654 21
Q ss_pred CCCCCCCCcCceeEEEEEeeecCCCceEecCCC-C-----CC-----CCCCCC--------CCccCC--ceEEECCcccC
Q 008840 224 PLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTG-N-----NP-----SIHPQW--------QPEYFG--DVIVVNGKAWP 282 (551)
Q Consensus 224 ~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g-~-----~~-----~~~~~~--------~~~~~g--d~~lVNG~~~P 282 (551)
.. |..+++|++|+|+||+............. . .+ ++...+ ..+..+ ..+++||+..|
T Consensus 148 ~~--~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~n~~~~p 225 (574)
T PLN02191 148 KE--RLRYDGEFNLLLSDWWHESIPSQELGLSSKPMRWIGEAQSILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAP 225 (574)
T ss_pred CC--CCCCCeeEEEeeeccccCChHHHHHhhccCCCCcCCCCCceEECCCCCCCCcccccccCCcccccceeccCCCCCc
Confidence 11 12248899999999965431111000000 0 00 000000 000011 13556776666
Q ss_pred -ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 283 -RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 283 -~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
.++|++ ++|||||||+|..+.+.|+| +||+|+||++||.++ +|+.+++|.|++||||||+|++++.++++|+|+..
T Consensus 226 ~~~~v~~G~~yRlRiINa~~~~~~~~~i-dgH~~tVIa~DG~~v-~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira~ 303 (574)
T PLN02191 226 QTLRVEPNKTYRIRLASTTALASLNLAV-QGHKLVVVEADGNYI-TPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVG 303 (574)
T ss_pred eEEEEcCCCEEEEEEEecCCceeEEEEE-CCCeEEEEEcCCeec-cceEeeeEEEcCCCeEEEEEECCCCCCCCEEEEEE
Confidence 589998 89999999999999999999 699999999999999 89999999999999999999999876668999875
Q ss_pred CCCCCCCCCCCCCCCCceEEEEEccCCCCC-CC----CCCC----------CCCCCCC---CCCccCceeeEEeeeeccc
Q 008840 361 APYPYPAGNPVNDANGKVMKFIILKNRETD-PW----RVPE----------KLIEYPS---ADLSAASTTRYIAMYEYTS 422 (551)
Q Consensus 361 ~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~-~~----~lP~----------~L~~~~~---~~~~~~~~~r~~~l~~~~~ 422 (551)
..... .. ....+..+++.+..... ++ ..|. .+..+.. .+.+.....+.+.+.. ..
T Consensus 304 ~~~~~-----~~-~~~~~ail~Y~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~ 376 (574)
T PLN02191 304 VRGRK-----PN-TTQALTILNYVTAPASKLPSSPPPVTPRWDDFERSKNFSKKIFSAMGSPSPPKKYRKRLILLNT-QN 376 (574)
T ss_pred ccccC-----CC-CCCceEEEEECCCCCCCCCCCCCCCCCcccccchhhcccccccccccCCCCCCcccceEEEecc-cc
Confidence 32110 00 11123445554322111 10 0110 0000110 0011111122222221 11
Q ss_pred CCCCcceEEEcccccCCCCCC------------------------------------Cc----------ceeeeEEEEee
Q 008840 423 NTGKPTHLLINAKTLEDPVTE------------------------------------TP----------KTLDQTELVNL 456 (551)
Q Consensus 423 ~~g~~~~~~INg~~f~~~~~~------------------------------------~~----------~~~~~~~l~n~ 456 (551)
.......|.|||.+|..+.+. .. ..+.+..|.|.
T Consensus 377 ~~~~~~~~~~n~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~ 456 (574)
T PLN02191 377 LIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRSYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNA 456 (574)
T ss_pred eeCCeEEEEECcccCcCCCcchHHHHhhccCcccccCCCcccccccccccCCCccccccccceeEEecCCCEEEEEEECC
Confidence 111234689999887522110 00 01334445554
Q ss_pred e------eeeeeeccccCceeeeeeeeccCCcc------CCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCC
Q 008840 457 E------EFKACMNKINDAIKCNLSKHACGKKQ------AVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDAT 524 (551)
Q Consensus 457 ~------~~~~~~~~~~~~~~~~v~~~~~G~~~------~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~ 524 (551)
. ...|+||+|||.| .+.....|.-. ......+..||||.|++++++.|+++.+
T Consensus 457 ~~~~~~~~~~HP~HLHGh~F--~Vlg~G~g~~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRf~aD------------- 521 (574)
T PLN02191 457 NVLKGVVSEIHPWHLHGHDF--WVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTD------------- 521 (574)
T ss_pred CcccCCCCCCCCEEeCCCCe--EEEEecCCCCCcccCcccccCCCCCcCCeEEeCCCCEEEEEEECC-------------
Confidence 3 4579999999955 45443444210 0123456799999999999999977776
Q ss_pred CCCc-eEEeeccccccccCcccceE
Q 008840 525 AEPG-YVYHCHILDHEDNIMMRPLK 548 (551)
Q Consensus 525 ~~pg-~~~HCHiL~HED~GMM~~~~ 548 (551)
||| |++||||.+|...||...|.
T Consensus 522 -NPG~Wl~HCHi~~Hl~~Gm~~~~~ 545 (574)
T PLN02191 522 -NPGVWFFHCHIEPHLHMGMGVVFA 545 (574)
T ss_pred -CCEEEEEecCchhhhhcCCEEEEe
Confidence 999 99999999999999998874
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-58 Score=495.43 Aligned_cols=402 Identities=25% Similarity=0.342 Sum_probs=288.9
Q ss_pred EEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEE
Q 008840 67 EIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVV 146 (551)
Q Consensus 67 ~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~i 146 (551)
.+......+++.... .+..|+|+ |++|||+||+++||+|+|+++|+|.+ +|++
T Consensus 36 ~~~~~~~~~~~~~~~-~~~~~~~~-----g~~~gP~i~~~~Gd~v~l~~~N~l~~---------------------~t~v 88 (451)
T COG2132 36 FLTAQRAQLAFAPGT-GATVWGYN-----GALPGPTIRVKKGDTVTLDLTNRLLV---------------------DTSV 88 (451)
T ss_pred EEeecccceeeecCC-CceeEEec-----ccccCceEEEecCCEEEEEEEeCCCC---------------------CceE
Confidence 333455556665555 78899998 89999999999999999999999996 5999
Q ss_pred eeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCC
Q 008840 147 HLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLR 226 (551)
Q Consensus 147 H~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~ 226 (551)
||||+.+++.+||.+. .+++.+.+|+++ +|.|+.+ .+||||||+|.++ |+++||+|++||+|+. +.
T Consensus 89 h~HG~~~p~~~dG~~~--~~~~~~~~~~~~---~y~f~~~-~~gT~wyh~H~~~----Q~~~Gl~G~~II~~~~-~~--- 154 (451)
T COG2132 89 HWHGLPVPGEMDGVPP--LTQIPPGPGETP---TYTFTQD-VPGTYWYHPHTHG----QVYDGLAGALIIEDEN-SE--- 154 (451)
T ss_pred EEcCcccCccccCCCc--ccccCCCCCCcE---EEeecCC-CCcceEeccCCCc----hhhcccceeEEEeCCC-CC---
Confidence 9999999999999876 566667788877 9999996 5669999999987 9999999999999875 32
Q ss_pred CCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccCceeecCeEEEEEEEecCCCceEEE
Q 008840 227 LPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRF 306 (551)
Q Consensus 227 lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~l 306 (551)
|.+ .+|.+++++|..++.++...+.. ..|..++.|++.+|||+.+|++.+++++|||||+|+++.+.+++
T Consensus 155 -~~~-~d~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~vnG~~~p~~~~~~g~~rlRl~n~~~~~~~~~ 224 (451)
T COG2132 155 -PLG-VDDEPVILQDDWLDEDGTDLYQE--------GPAMGGFPGDTLLVNGAILPFKAVPGGVVRLRLLNAGNARTYHL 224 (451)
T ss_pred -CCC-CCceEEEEEeeeecCCCCccccC--------CccccCCCCCeEEECCCccceeecCCCeEEEEEEecCCceEEEE
Confidence 224 56777777777788888765442 13344677999999999999999999999999999999999999
Q ss_pred EEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccC
Q 008840 307 FFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKN 386 (551)
Q Consensus 307 ~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~ 386 (551)
++. |++|+||++||++++. +.++.+.|+||||+||+|++.+ ++.+.|.+.... ...-..+.......++......
T Consensus 225 ~~~-~~~~~Vi~~DG~~v~~-~~~d~~~l~p~er~~v~v~~~~--~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 299 (451)
T COG2132 225 ALG-GGPLTVIAVDGGPLPP-VSVDELYLAPGERYEVLVDMND--GGAVTLTALGED-MPDTLKGFRAPNPILTPSYPVL 299 (451)
T ss_pred Eec-CceEEEEEeCCcCcCc-eeeeeEEecCcceEEEEEEcCC--CCeEEEEecccc-CCceeeeeeccccccccccccc
Confidence 996 9999999999999955 9999999999999999999998 458888875411 0000000000000010000000
Q ss_pred CCCCCCCCCCCCC---CCC---CCCC-cc-CceeeEEeeeecccCCCCcceEEEcccccCCC-CCCCcc--eeeeEEEEe
Q 008840 387 RETDPWRVPEKLI---EYP---SADL-SA-ASTTRYIAMYEYTSNTGKPTHLLINAKTLEDP-VTETPK--TLDQTELVN 455 (551)
Q Consensus 387 ~~~~~~~lP~~L~---~~~---~~~~-~~-~~~~r~~~l~~~~~~~g~~~~~~INg~~f~~~-~~~~~~--~~~~~~l~n 455 (551)
. .....|.... ... .... .. ..+...+.+.... ....|.||++.|++. .....+ ..++|.+.|
T Consensus 300 ~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~n~~~~~~~~~~~~~~~G~~~~~~i~n 373 (451)
T COG2132 300 N--GRVGAPTGDMADHAPVGLLVTILVEPGPNRDTDFHLIGGI----GGYVWAINGKAFDDNRVTLIAKAGTRERWVLTN 373 (451)
T ss_pred c--ccccCCCcchhhccccccchhhcCCCcccccccchhhccc----ccccccccCccCCCCcCceeecCCCEEEEEEEC
Confidence 0 0000011000 000 0000 00 1111222221110 124589999999962 211111 288999999
Q ss_pred eeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeec
Q 008840 456 LEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCH 534 (551)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCH 534 (551)
.+.+.|++|.|++.| ++... + .+......+|||||.+.|++.+.|+++++ +|| ||||||
T Consensus 374 ~~~~~HP~HlHg~~F--~v~~~-~---~~~~~~~~~~kDTv~v~~~~~~~v~~~a~--------------~~g~~~~HCH 433 (451)
T COG2132 374 DTPMPHPFHLHGHFF--QVLSG-D---APAPGAAPGWKDTVLVAPGERLLVRFDAD--------------YPGPWMFHCH 433 (451)
T ss_pred CCCCccCeEEcCceE--EEEec-C---CCcccccCccceEEEeCCCeEEEEEEeCC--------------CCCceEEecc
Confidence 999999999999955 55442 2 23334556999999999998877766665 567 999999
Q ss_pred cccccccCcccceEEc
Q 008840 535 ILDHEDNIMMRPLKLI 550 (551)
Q Consensus 535 iL~HED~GMM~~~~V~ 550 (551)
+|+|||+|||+++.|.
T Consensus 434 ~l~H~~~Gm~~~~~v~ 449 (451)
T COG2132 434 ILEHEDNGMMGQFGVV 449 (451)
T ss_pred chhHhhcCCeeEEEec
Confidence 9999999999999885
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-50 Score=437.13 Aligned_cols=400 Identities=22% Similarity=0.285 Sum_probs=271.8
Q ss_pred CccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC--CCCC
Q 008840 83 PTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE--SDGY 160 (551)
Q Consensus 83 ~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~--~DG~ 160 (551)
+..+.+- ||++|||+|+|++||+|.|++.|++.+ +++|||||+++... +||
T Consensus 46 ~~~vi~i-----NG~fPGP~I~~~~gD~ivV~v~N~~~~---------------------~~sihWhGv~q~kn~w~DG- 98 (563)
T KOG1263|consen 46 EKQVITI-----NGQFPGPTINAEEGDTIVVNVVNRLDE---------------------PFSIHWHGVRQRKNPWQDG- 98 (563)
T ss_pred cceeEee-----cCCCCCCeEEEEeCCEEEEEEEeCCCC---------------------ceEEEeccccccCCccccC-
Confidence 3445555 499999999999999999999999997 89999999998765 899
Q ss_pred CCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEE
Q 008840 161 AKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVF 240 (551)
Q Consensus 161 p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~ 240 (551)
+. +|||+|+||++| +|+|+++++.||||||+|.. .|-++|++|+|||+++. ..++++|.. ++|++|+|+
T Consensus 99 ~~--~TqCPI~Pg~~~---tY~F~v~~q~GT~~yh~h~~----~~Ra~G~~G~liI~~~~-~~p~pf~~p-d~E~~ill~ 167 (563)
T KOG1263|consen 99 VY--ITQCPIQPGENF---TYRFTVKDQIGTLWYHSHVS----WQRATGVFGALIINPRP-GLPVPFPKP-DKEFTILLG 167 (563)
T ss_pred Cc--cccCCcCCCCeE---EEEEEeCCcceeEEEeeccc----cccccCceeEEEEcCCc-cCCCCCCCC-CceeEEEeE
Confidence 55 899999999999 99999999999999999984 46789999999999655 444555643 899999999
Q ss_pred EeeecCCCceE---ecCCCCCCCCCCCCCCccCCceEEECCccc------CceeecC-eEEEEEEEecCCCceEEEEEcC
Q 008840 241 DRNFLTNGSIY---MNSTGNNPSIHPQWQPEYFGDVIVVNGKAW------PRMTVRR-RKYRFRIINASNARFFRFFFTN 310 (551)
Q Consensus 241 d~~~~~~g~~~---~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~------P~~~v~~-~~~RlRllNas~~~~~~l~l~~ 310 (551)
||..+.+-+.. ....+.. +. ..|..+|||+.. +.++|++ ++|||||+|++.+..+.|+| .
T Consensus 168 dW~~~~~~~~l~~~~~~~~~~--------p~-~~D~~~iNg~~g~~~~~~~~l~v~pGktY~lRiiN~g~~~~l~F~I-~ 237 (563)
T KOG1263|consen 168 DWYKNLNHKNLKNFLDRTGAL--------PN-PSDGVLINGRSGFLYNCTPTLTVEPGKTYRLRIINAGLNTSLNFSI-A 237 (563)
T ss_pred eeccccCHHHHHHhhccCCCC--------CC-CCCceEECCCCCcccCceeEEEEcCCCEEEEEEEccccccceEEEE-C
Confidence 99553232211 1111111 11 168999999983 4678988 89999999999999899999 5
Q ss_pred CceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCC
Q 008840 311 GLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETD 390 (551)
Q Consensus 311 g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~ 390 (551)
+|.|+||++||.++ +|...++|.|.||||++|+|++++.++ +|+++....... ..... ....+..+++.+.....
T Consensus 238 ~H~ltvVe~Dg~y~-~p~~~~~l~i~~GQ~~~vLvtadq~~~-~Y~i~~~~~~~~--~~~~~-~~t~~~~l~y~~~~~~~ 312 (563)
T KOG1263|consen 238 NHQLTVVEVDGAYT-KPFTTDSLDIHPGQTYSVLLTADQSPG-DYYIAASPYFDA--SNVPF-NLTTTGILRYSGSTHPA 312 (563)
T ss_pred CeEEEEEEecceEE-eeeeeceEEEcCCcEEEEEEeCCCCCC-cEEEEEEeeecc--CCcce-eeeEEEEEEEeCCcccC
Confidence 99999999999999 899999999999999999999999986 888876542210 00000 11123334444321111
Q ss_pred CCC------CCC------------CCCCC-----CCCCCccC------ceeeEEeeeecccCCCCcceEEEcccccCCCC
Q 008840 391 PWR------VPE------------KLIEY-----PSADLSAA------STTRYIAMYEYTSNTGKPTHLLINAKTLEDPV 441 (551)
Q Consensus 391 ~~~------lP~------------~L~~~-----~~~~~~~~------~~~r~~~l~~~~~~~g~~~~~~INg~~f~~~~ 441 (551)
... +|. .++.+ +.+.+... ...+.+.+-......+....+.||+..|-.+.
T Consensus 313 s~~~~~~~~~~~~~~~~~s~~~~~~~r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~siN~isf~~P~ 392 (563)
T KOG1263|consen 313 SEKLPIYPFLPPGNDTAWSTYQARSIRSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDNKNNGKLRASINNISFVTPK 392 (563)
T ss_pred cccCcccccCCcccCchhhhhhhhcccccccccCcccCCCccccccceeeeccEEeccCCCCCCcEEEEEEcceEEECCC
Confidence 111 111 01100 00000000 00111111111111122345678877775543
Q ss_pred C--------------------CCc---------ce-----------eeeEEEEeeee---eeeeeccccCceeeeeeeec
Q 008840 442 T--------------------ETP---------KT-----------LDQTELVNLEE---FKACMNKINDAIKCNLSKHA 478 (551)
Q Consensus 442 ~--------------------~~~---------~~-----------~~~~~l~n~~~---~~~~~~~~~~~~~~~v~~~~ 478 (551)
+ ..| .. +.+-.+-|.+. ..|++|+|++.| .+.-..
T Consensus 393 tp~~l~~~~~~~~~~~~~d~p~~P~~~~~~~~~~~~t~v~~~~~~~~veIVlqN~~~~~~~~hp~HLHG~~F--~Vvg~g 470 (563)
T KOG1263|consen 393 TPSLLAAYFKNIPGYFTNDFPDKPPIKFDYTGPTLGTSVMKLEFNSFVEIVLQNTSTGTQENHPNHLHGYNF--YVVGYG 470 (563)
T ss_pred CchhhhhhhccCCccccCccCCCCccccCCccccccceEEEeecCCEEEEEEeCCccccCCCCccceeceEE--EEEEec
Confidence 2 111 00 11222333222 235668888744 444332
Q ss_pred cCCc-------cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 479 CGKK-------QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 479 ~G~~-------~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.|.- ..-...++--||||.|+||+++.|+|++| ||| |.+||||.+|.-.||..-|+|.
T Consensus 471 ~G~~~~~~d~~~~yNl~dp~~R~Tv~V~pggw~aIrf~ad--------------NPG~W~~HCHie~H~~~G~~~~f~V~ 536 (563)
T KOG1263|consen 471 FGNWDPAKDPRKKYNLVDPVSRDTVQVPPGGWTAIRFVAD--------------NPGVWLMHCHIEDHLYLGMETVFIVG 536 (563)
T ss_pred ccccCcCcChhhhcccCCCcccceEEeCCCCEEEEEEEcC--------------CCcEEEEEEecHHHHhccCeEEEEEe
Confidence 2210 11234456789999999999999988887 899 9999999999999999999986
Q ss_pred C
Q 008840 551 K 551 (551)
Q Consensus 551 ~ 551 (551)
+
T Consensus 537 ~ 537 (563)
T KOG1263|consen 537 N 537 (563)
T ss_pred C
Confidence 4
|
|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=358.17 Aligned_cols=248 Identities=18% Similarity=0.160 Sum_probs=201.3
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+.++++.++. .+.+|+|| |++|||+||+++||+|+|+|+|++... .+
T Consensus 28 ~~~~l~a~~~~~~~~~G~-~~~~~~~n-----G~~pGP~irv~~Gd~v~v~v~N~~~~~-------------------~~ 82 (311)
T TIGR02376 28 VEVTMTIEEKKMVIDDGV-TYQAMTFD-----GSVPGPLIRVHEGDYVELTLINPPTNT-------------------MP 82 (311)
T ss_pred EEEEEEEEEEEEEeCCCe-EEEEEEEC-----CcccCceEEEECCCEEEEEEEeCCCCC-------------------Cc
Confidence 467888888888887776 78899998 999999999999999999999998531 17
Q ss_pred eEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCC
Q 008840 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA 223 (551)
Q Consensus 144 t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~ 223 (551)
+++||||.. .+||++. +++ |.||+++ +|+|.++ ++||||||||.++.+..|+++||+|+|||++++ .
T Consensus 83 h~~h~H~~~---~~dg~~~--~~~--I~PG~t~---ty~F~~~-~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~-~- 149 (311)
T TIGR02376 83 HNVDFHAAT---GALGGAA--LTQ--VNPGETA---TLRFKAT-RPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPRE-G- 149 (311)
T ss_pred eeeeecCCC---ccCCCCc--cee--ECCCCeE---EEEEEcC-CCEEEEEEcCCCCchhHHhhcCcceEEEeeccC-C-
Confidence 999999963 4688775 565 8999999 9999996 899999999999888899999999999999643 2
Q ss_pred CCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---CceeecC-eEEEEEEEecC
Q 008840 224 PLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---PRMTVRR-RKYRFRIINAS 299 (551)
Q Consensus 224 ~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---P~~~v~~-~~~RlRllNas 299 (551)
+|. .++|++|+++||+++.++....... . ...++....+++++|||+.. |.+++++ +++||||+|+|
T Consensus 150 ---~~~-~d~e~~l~l~d~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~iNG~~~~~~~~~~v~~G~~~RlRiiNa~ 220 (311)
T TIGR02376 150 ---LPE-YDKEYYIGESDLYTPKDEGEGGAYE----D-DVAAMRTLTPTHVVFNGAVGALTGDNALTAGVGERVLFVHSQ 220 (311)
T ss_pred ---CcC-cceeEEEeeeeEecccccccccccc----c-hHHHHhcCCCCEEEECCccCCCCCCcccccCCcEEEEEEcCC
Confidence 233 3889999999998876543210000 0 00001123468999999964 5678887 89999999999
Q ss_pred CCceEEEEEcCCceEEEEEcCCCCCCCce-EecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 300 NARFFRFFFTNGLRFIHVGSDSAYLGKPV-VTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 300 ~~~~~~l~l~~g~~~~via~DG~~l~~P~-~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
+++.+.|++ .|+.|++|+.||+++..|. .++++.|+||||+||+|+++++ | .|.+++..
T Consensus 221 ~~~~~~~~~-~g~~~~~v~~DG~~~~~~~~~~~~~~i~PG~R~dv~v~~~~p-G-~y~~~~~~ 280 (311)
T TIGR02376 221 PNRDSRPHL-IGGHGDYVWVTGKFANPPNRDVETWFIPGGSAAAALYTFEQP-G-VYAYVDHN 280 (311)
T ss_pred CCCCCCCeE-ecCCceEEEECCcccCCCCCCcceEEECCCceEEEEEEeCCC-e-EEEEECcH
Confidence 999999999 5999999999999997666 5899999999999999999974 4 89998764
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-31 Score=230.07 Aligned_cols=111 Identities=33% Similarity=0.561 Sum_probs=98.6
Q ss_pred EEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCC
Q 008840 72 EKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG 151 (551)
Q Consensus 72 ~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~ 151 (551)
+.++.+.... ..+|+|| |++|||+||+++||+|+|+|+|+|+. +++|||||+
T Consensus 4 ~~~~~~~~~~--~~~~~~n-----g~~pGPtI~v~~Gd~v~i~~~N~l~~---------------------~~siH~HG~ 55 (117)
T PF07732_consen 4 ETTVSPDGGT--RKVWTYN-----GQFPGPTIRVREGDTVRITVTNNLDE---------------------PTSIHWHGL 55 (117)
T ss_dssp EEEEETTSTE--EEEEEET-----TBSSEEEEEEETTEEEEEEEEEESSS---------------------GBSEEEETS
T ss_pred EEEEEeCCcE--EEEEEEC-----CCCCCCEEEEEcCCeeEEEEEecccc---------------------cccccccee
Confidence 4555664433 8899998 99999999999999999999999987 899999999
Q ss_pred CCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCC
Q 008840 152 IDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP 219 (551)
Q Consensus 152 ~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp 219 (551)
++++. +||+++ .++++|.||+++ +|+|++.+++||||||||.++ |..+||+|+|||+++
T Consensus 56 ~~~~~~~~DG~~~--~~~~~i~pG~~~---~Y~~~~~~~~Gt~wYH~H~~~----~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 56 HQPPSPWMDGVPG--VTQCPIAPGESF---TYEFTANQQAGTYWYHSHVHG----QQVMGLYGAIIVEPP 116 (117)
T ss_dssp BSTTGGGGSGGTT--TSGSSBSTTEEE---EEEEEESSCSEEEEEEECSTT----HHHTTEEEEEEEE-T
T ss_pred eeeeeeecCCccc--ccceeEEeecce---eeeEeeeccccceeEeeCCCc----hhcCcCEEEEEEcCC
Confidence 99988 999998 688899999999 999999877999999999987 545999999999964
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-19 Score=166.51 Aligned_cols=121 Identities=21% Similarity=0.306 Sum_probs=92.4
Q ss_pred ceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCc-------------ccCceeecC-eEEEEEEEecC
Q 008840 234 DRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGK-------------AWPRMTVRR-RKYRFRIINAS 299 (551)
Q Consensus 234 e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~-------------~~P~~~v~~-~~~RlRllNas 299 (551)
|++|+++||+.+....+........ ..... ....++.++|||+ ..|.+++++ ++|||||||+|
T Consensus 2 e~~i~l~DW~~~~~~~~~~~~~~~~-~~~~~--~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~v~~g~~~rlRliNa~ 78 (159)
T PF00394_consen 2 EYVIMLSDWYHDDSDDLLQQYFAPG-KGPMG--MPPIPDSILINGKGRFDCSSADYTGGEPPVIKVKPGERYRLRLINAG 78 (159)
T ss_dssp GGEEEEEEETSSCTTTHBH-HSSCH-HHSHS--CTSSCSEEEETTBTCBTTCTTGSTTSTSGEEEEETTTEEEEEEEEES
T ss_pred eEEEEEeECCCCCHHHhhhhhcccc-ccccC--CCcCCcEEEECCccccccccccccccccceEEEcCCcEEEEEEEecc
Confidence 7899999996443333321111000 00000 1346899999995 357889998 89999999999
Q ss_pred CCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 300 NARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 300 ~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
+.+.+.|+| +||+|+|||.||.++ +|..+++|.|+|||||||+|++++. +++|+|+..
T Consensus 79 ~~~~~~~~i-~gh~~~Via~DG~~v-~p~~~~~l~l~~G~R~dvlv~~~~~-~g~y~i~~~ 136 (159)
T PF00394_consen 79 ASTSFNFSI-DGHPMTVIAADGVPV-EPYKVDTLVLAPGQRYDVLVTADQP-PGNYWIRAS 136 (159)
T ss_dssp SS-BEEEEE-TTBCEEEEEETTEEE-EEEEESBEEE-TTEEEEEEEEECSC-SSEEEEEEE
T ss_pred CCeeEEEEe-eccceeEeeeccccc-cccccceEEeeCCeEEEEEEEeCCC-CCeEEEEEe
Confidence 999999999 699999999999999 5999999999999999999999984 459999984
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-18 Score=156.62 Aligned_cols=87 Identities=26% Similarity=0.456 Sum_probs=71.0
Q ss_pred eeeEEEEeeeeeeeeeccccCceeeeeeeeccCC-----ccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCC
Q 008840 448 LDQTELVNLEEFKACMNKINDAIKCNLSKHACGK-----KQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFD 522 (551)
Q Consensus 448 ~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~-----~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~ 522 (551)
+++|.+.|.....|++|.|++.| .+.....+. .......++.|||||.|+++++++|+++++
T Consensus 43 ~v~~~l~N~~~~~Hp~HlHG~~F--~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~~----------- 109 (138)
T PF07731_consen 43 VVEIVLQNNGSMPHPFHLHGHSF--QVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRAD----------- 109 (138)
T ss_dssp EEEEEEEECTTSSEEEEETTSEE--EEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEET-----------
T ss_pred EEEEEEECCCCCccceEEEeeEE--EeeecCCcccccccccccccccCcccccccccceeEEEEEEEee-----------
Confidence 77899999888899999999954 555532221 122356788999999999999999999987
Q ss_pred CCCCCc-eEEeeccccccccCcccceEEc
Q 008840 523 ATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 523 ~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+|| ||||||||+|||+|||+.|+|.
T Consensus 110 ---~~G~w~~HCHi~~H~~~GM~~~~~v~ 135 (138)
T PF07731_consen 110 ---NPGPWLFHCHILEHEDNGMMAVFVVG 135 (138)
T ss_dssp ---STEEEEEEESSHHHHHTT-EEEEEEC
T ss_pred ---cceEEEEEEchHHHHhCCCeEEEEEc
Confidence 678 9999999999999999999985
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-14 Score=131.80 Aligned_cols=95 Identities=19% Similarity=0.219 Sum_probs=71.5
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCC--CCCCCCCCcceeccccCCC--
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDE--PESDGYAKSWFTAGFEEKG-- 173 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~--~~~DG~p~~~~t~~~i~pG-- 173 (551)
.+||+|++++||+|+|+++|.+... .| ...||+||...+ +.+||++. .+++++.|+
T Consensus 49 ~~~P~I~v~~Gd~V~v~v~N~~~~~--------~H----------~~~I~~~g~~~~~~p~mdG~~~--~~~~~i~p~~~ 108 (148)
T TIGR03095 49 LKNPTIVIPEGVTVHFTVINTDTDS--------GH----------NFDISKRGPPYPYMPGMDGLGF--VAGTGFLPPPK 108 (148)
T ss_pred CCCCEEEEcCCCEEEEEEEeCCCCc--------cc----------cEEeecCCCccccccccCCCCc--cccCcccCCCC
Confidence 7899999999999999999986531 11 578899988654 45899886 666666663
Q ss_pred -CCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 174 -PTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 174 -~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
..+...++.|... ++||||||||..+ |..+||+|.|||+
T Consensus 109 ~g~~~~~~~tf~f~-~aGtywyhC~~pg----H~~~GM~G~iiV~ 148 (148)
T TIGR03095 109 SGKFGYTDFTYHFS-TAGTYWYLCTYPG----HAENGMYGKIVVK 148 (148)
T ss_pred CCccceeEEEEECC-CCeEEEEEcCChh----HHHCCCEEEEEEC
Confidence 1110125667765 8999999999854 6678999999996
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.1e-13 Score=146.66 Aligned_cols=101 Identities=20% Similarity=0.202 Sum_probs=80.9
Q ss_pred CccEEEeecCCCCCCCCC--cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCC-CC
Q 008840 83 PTPVFAFGTSSLTASVPG--PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPES-DG 159 (551)
Q Consensus 83 ~~~~~~y~~~~~ng~~PG--Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~-DG 159 (551)
...+|+|| |+.++ +.|++++||+|+|+|.|.+.. ++.+||||....... ||
T Consensus 484 ~~~~wtiN-----G~~~~~~~pl~v~~Gervri~l~N~t~~---------------------~HpmHlHG~~f~v~~~~G 537 (587)
T TIGR01480 484 ERFAWSFD-----GEAFGLKTPLRFNYGERLRVVLVNDTMM---------------------AHPIHLHGMWSELEDGQG 537 (587)
T ss_pred ceeEEEEC-----CccCCCCCceEecCCCEEEEEEECCCCC---------------------CcceeEcCceeeeecCCC
Confidence 45679998 88777 479999999999999999887 899999999766554 55
Q ss_pred CCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 160 YAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 160 ~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.....-....|.||+++ +|+|.++ ++|+||||||.. .|...||++.+.|+
T Consensus 538 ~~~~~~dTv~V~Pg~t~---~~~f~ad-~pG~w~~HCH~l----~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 538 EFQVRKHTVDVPPGGKR---SFRVTAD-ALGRWAYHCHML----LHMEAGMFREVTVR 587 (587)
T ss_pred cccccCCceeeCCCCEE---EEEEECC-CCeEEEEcCCCH----HHHhCcCcEEEEeC
Confidence 32111111368999999 9999996 899999999973 57889999999874
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.07 E-value=2e-08 Score=103.27 Aligned_cols=221 Identities=18% Similarity=0.185 Sum_probs=133.9
Q ss_pred CceEEECCcc-cCceeecC-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEc
Q 008840 271 GDVIVVNGKA-WPRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDF 347 (551)
Q Consensus 271 gd~~lVNG~~-~P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~ 347 (551)
-+.+++||+. .|.+.++. +++++++.|.... ....+++ |++. +.||+.. ...|.|||++.+-+++
T Consensus 47 ~~~~~~nG~~pGP~irv~~Gd~v~v~v~N~~~~~~~h~~h~-H~~~----~~dg~~~-------~~~I~PG~t~ty~F~~ 114 (311)
T TIGR02376 47 YQAMTFDGSVPGPLIRVHEGDYVELTLINPPTNTMPHNVDF-HAAT----GALGGAA-------LTQVNPGETATLRFKA 114 (311)
T ss_pred EEEEEECCcccCceEEEECCCEEEEEEEeCCCCCCceeeee-cCCC----ccCCCCc-------ceeECCCCeEEEEEEc
Confidence 3588999995 48999988 8999999998632 3455666 5653 4577532 1238999999998887
Q ss_pred CCCCCceEEEecCCCC----CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc--
Q 008840 348 SESTSDVAILANDAPY----PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT-- 421 (551)
Q Consensus 348 ~~~~g~~~~L~~~~~~----~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~-- 421 (551)
++ + ++|+....... ....| -.-.|.|.... .+|. ..++..+.+.++.
T Consensus 115 ~~-~-Gty~YH~H~~~~~~~q~~~G--------l~G~liV~~~~-----~~~~------------~d~e~~l~l~d~~~~ 167 (311)
T TIGR02376 115 TR-P-GAFVYHCAPPGMVPWHVVSG--------MNGAIMVLPRE-----GLPE------------YDKEYYIGESDLYTP 167 (311)
T ss_pred CC-C-EEEEEEcCCCCchhHHhhcC--------cceEEEeeccC-----CCcC------------cceeEEEeeeeEecc
Confidence 65 3 48988876321 11111 12234454321 1110 0011111111110
Q ss_pred ---------------cCCCCcceEEEcccccCC--CCCCCcceeeeEEEEeeee-eeeeeccccCceeeeeeeeccCCcc
Q 008840 422 ---------------SNTGKPTHLLINAKTLED--PVTETPKTLDQTELVNLEE-FKACMNKINDAIKCNLSKHACGKKQ 483 (551)
Q Consensus 422 ---------------~~~g~~~~~~INg~~f~~--~~~~~~~~~~~~~l~n~~~-~~~~~~~~~~~~~~~v~~~~~G~~~ 483 (551)
...+.+..++|||+.+.- ...-.+.....|.++|... ....+|..++.+ .+.. .+|...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~--~~v~-~DG~~~ 244 (311)
T TIGR02376 168 KDEGEGGAYEDDVAAMRTLTPTHVVFNGAVGALTGDNALTAGVGERVLFVHSQPNRDSRPHLIGGHG--DYVW-VTGKFA 244 (311)
T ss_pred ccccccccccchHHHHhcCCCCEEEECCccCCCCCCcccccCCcEEEEEEcCCCCCCCCCeEecCCc--eEEE-ECCccc
Confidence 011234568999996432 1111222367899999764 223455556533 2322 367433
Q ss_pred CCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccccc-ccCcccceEEc
Q 008840 484 AVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHE-DNIMMRPLKLI 550 (551)
Q Consensus 484 ~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HE-D~GMM~~~~V~ 550 (551)
.++ ....||+.+.||++..|+++++ .|| |++|||...|. ..|||+.|+|-
T Consensus 245 ~~~---~~~~~~~~i~PG~R~dv~v~~~--------------~pG~y~~~~~~~~~~~~~g~~~~i~~~ 296 (311)
T TIGR02376 245 NPP---NRDVETWFIPGGSAAAALYTFE--------------QPGVYAYVDHNLIEAFEKGAAAQVKVE 296 (311)
T ss_pred CCC---CCCcceEEECCCceEEEEEEeC--------------CCeEEEEECcHHHHHHhCCCEEEEEEC
Confidence 321 1247999999999999999988 457 99999999998 77999988863
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-08 Score=90.59 Aligned_cols=93 Identities=14% Similarity=0.103 Sum_probs=69.9
Q ss_pred eeEEEEEEEEEE-ee-cCCCCCccEE-EeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKW-KF-HRDLPPTPVF-AFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKK 140 (551)
Q Consensus 64 ~~~~i~~~~~~~-~~-~~~~~~~~~~-~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~ 140 (551)
++++|.++++++ ++ -++. .+..+ ++| +++..+.|+|++||+|+++|.|.-+..|
T Consensus 27 f~~~i~~~~~~~~~~~~~~~-~~~~i~a~n-----~~~~P~~I~VkaGD~Vtl~vtN~d~~~H----------------- 83 (135)
T TIGR03096 27 FTVVINAYDTTIPELNVEGV-TVKNIRAFN-----VLNEPEALVVKKGTPVKVTVENKSPISE----------------- 83 (135)
T ss_pred eEEEEeccccEeeEEEeCCE-EEEEEEeee-----eEEcCCEEEECCCCEEEEEEEeCCCCcc-----------------
Confidence 567777778887 66 4444 45556 776 9999999999999999999999755310
Q ss_pred CCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCC
Q 008840 141 GVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMG 200 (551)
Q Consensus 141 ~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g 200 (551)
..+++.||. +..+.||++. +|+|+++ .+|+|||||-.|.
T Consensus 84 --~f~i~~~gi---------------s~~I~pGet~---TitF~ad-KpG~Y~y~C~~HP 122 (135)
T TIGR03096 84 --GFSIDAYGI---------------SEVIKAGETK---TISFKAD-KAGAFTIWCQLHP 122 (135)
T ss_pred --ceEECCCCc---------------ceEECCCCeE---EEEEECC-CCEEEEEeCCCCC
Confidence 234444432 1147899998 9999996 9999999999985
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.5e-05 Score=87.74 Aligned_cols=84 Identities=13% Similarity=0.235 Sum_probs=64.3
Q ss_pred EEECCcccC----ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCC--ceEecEEEEccCceEEEEEE
Q 008840 274 IVVNGKAWP----RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGK--PVVTNDTVLAPAEIADVVID 346 (551)
Q Consensus 274 ~lVNG~~~P----~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~--P~~~~~l~l~pgeR~dVlv~ 346 (551)
++|||+.+. .++++. .+.+|+|+|.+......+|| ||+.|+|++.||..++. +-.+|++.+.| ++++|+|+
T Consensus 414 ~~ING~~~~~~~~~~~~~~G~~e~w~i~N~~~~~~Hp~Hl-Hg~~F~Vl~~~g~~~~~~~~~wkDTv~v~~-~~~~i~~~ 491 (523)
T PRK10965 414 NKINGKAFDMNKPMFAAKKGQYERWVISGVGDMMLHPFHI-HGTQFRILSENGKPPAAHRAGWKDTVRVEG-GRSEVLVK 491 (523)
T ss_pred ccCCCeECCCCCcceecCCCCEEEEEEEeCCCCCccCeEE-eCcEEEEEEecCCCCCccccccccEEEECC-cEEEEEEE
Confidence 489999864 356776 79999999999644456666 79999999999998742 23479999976 88999999
Q ss_pred cCCCCC--ceEEEec
Q 008840 347 FSESTS--DVAILAN 359 (551)
Q Consensus 347 ~~~~~g--~~~~L~~ 359 (551)
|+...+ +.|.+..
T Consensus 492 f~~~~~~~g~~~~HC 506 (523)
T PRK10965 492 FDHDAPKEHAYMAHC 506 (523)
T ss_pred ecCCCCCCCCEEEEe
Confidence 986431 2555554
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.3e-05 Score=82.95 Aligned_cols=76 Identities=13% Similarity=0.021 Sum_probs=57.4
Q ss_pred cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCCcc
Q 008840 101 PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPTWT 177 (551)
Q Consensus 101 Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~~~ 177 (551)
++|+|++|+++++|+.|.-... ...+|.+|....- ..||.+-.++. .-.|.+|+++
T Consensus 187 ~~i~v~~G~~~RlRlINa~~~~--------------------~~~~~idgH~~~VIa~DG~~~~P~~~~~l~i~~GqRy- 245 (539)
T TIGR03389 187 FKLTVEPGKTYLLRIINAALND--------------------ELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTT- 245 (539)
T ss_pred eEEEECCCCEEEEEEEeccCCc--------------------eEEEEECCCeEEEEEeCCcccCceEeCeEEecCCCEE-
Confidence 5899999999999999986542 5677888765332 27887633322 2257899998
Q ss_pred eeeEEEEcCccCceeEEeccCC
Q 008840 178 NETYHYHNMQQPGNTWYHDHTM 199 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~ 199 (551)
+..+.+++.+|.||.+.+..
T Consensus 246 --dVlv~a~~~~g~y~i~~~~~ 265 (539)
T TIGR03389 246 --NVLLTADQSPGRYFMAARPY 265 (539)
T ss_pred --EEEEECCCCCceEEEEEecc
Confidence 88889887899999998853
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.8e-06 Score=77.89 Aligned_cols=91 Identities=20% Similarity=0.202 Sum_probs=67.3
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCCC-----------cce
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYAK-----------SWF 165 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p~-----------~~~ 165 (551)
.-.+.++++.|+.+++.+.|.... ++.+|+||....-. .++.+. +..
T Consensus 31 ~~~~~~~~~~g~~v~~~l~N~~~~---------------------~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~ 89 (138)
T PF07731_consen 31 GNTPVIEVKNGDVVEIVLQNNGSM---------------------PHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPG 89 (138)
T ss_dssp STTSEEEEETTSEEEEEEEECTTS---------------------SEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSS
T ss_pred CCcceEEEeCCCEEEEEEECCCCC---------------------ccceEEEeeEEEeeecCCcccccccccccccccCc
Confidence 347899999999999999997665 79999999975321 122221 000
Q ss_pred --eccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 166 --TAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 166 --t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
....+.||+.. +.+|.++ .+|.|.||||.. .+..+||.+.+.|.
T Consensus 90 ~~DTv~v~~~~~~---~i~~~~~-~~G~w~~HCHi~----~H~~~GM~~~~~v~ 135 (138)
T PF07731_consen 90 WRDTVLVPPGGWV---VIRFRAD-NPGPWLFHCHIL----EHEDNGMMAVFVVG 135 (138)
T ss_dssp EESEEEEETTEEE---EEEEEET-STEEEEEEESSH----HHHHTT-EEEEEEC
T ss_pred ccccccccceeEE---EEEEEee-cceEEEEEEchH----HHHhCCCeEEEEEc
Confidence 00135677777 8999996 999999999984 47889999999997
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.2e-05 Score=66.88 Aligned_cols=74 Identities=19% Similarity=0.286 Sum_probs=51.9
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|++++||+ |+|+|.-.. ++++.+.|.. +.. .+...+.||+++
T Consensus 46 P~~i~v~~Gd~--V~~~N~~~~---------------------~H~v~~~~~~------~~~---~~~~~~~pg~t~--- 90 (119)
T PRK02710 46 PSTLTIKAGDT--VKWVNNKLA---------------------PHNAVFDGAK------ELS---HKDLAFAPGESW--- 90 (119)
T ss_pred CCEEEEcCCCE--EEEEECCCC---------------------CceEEecCCc------ccc---ccccccCCCCEE---
Confidence 47999999997 567786443 6777765431 111 111236789988
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.|.. +|+|-|+|=.| -.+||.|.|+|+
T Consensus 91 ~~tF~~---~G~y~y~C~~H------~~~gM~G~I~V~ 119 (119)
T PRK02710 91 EETFSE---AGTYTYYCEPH------RGAGMVGKITVE 119 (119)
T ss_pred EEEecC---CEEEEEEcCCC------ccCCcEEEEEEC
Confidence 777764 89999999865 248999999985
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=8.8e-05 Score=80.80 Aligned_cols=80 Identities=14% Similarity=0.263 Sum_probs=58.4
Q ss_pred eEEECCcccC----ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCc---eEecEEEEccCceEEEE
Q 008840 273 VIVVNGKAWP----RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKP---VVTNDTVLAPAEIADVV 344 (551)
Q Consensus 273 ~~lVNG~~~P----~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P---~~~~~l~l~pgeR~dVl 344 (551)
.++|||+.|. .+.++. ++++|+|.|.. .+ .||| ||+.|+|+..||... .| -..|+|.+ + ++++|+
T Consensus 362 ~~~INg~~~~~~~~~~~~~~g~~e~W~~~n~~-~H--P~Hl-Hg~~FqVl~~~G~~~-~~~~~gwkDTV~v-~-~~v~i~ 434 (471)
T PRK10883 362 LPGINGALWDMNRIDVTAQQGTWERWTVRADM-PQ--AFHI-EGVMFLIRNVNGAMP-FPEDRGWKDTVWV-D-GQVELL 434 (471)
T ss_pred cCccCCcccCCCcceeecCCCCEEEEEEECCC-Cc--CEeE-CCccEEEEEecCCCC-CccccCcCcEEEc-C-CeEEEE
Confidence 3479999874 245665 79999998873 34 4556 899999999999854 23 23699999 4 579999
Q ss_pred EEcCCCCCc--eEEEec
Q 008840 345 IDFSESTSD--VAILAN 359 (551)
Q Consensus 345 v~~~~~~g~--~~~L~~ 359 (551)
++|+...+. .|.+..
T Consensus 435 ~~f~~~~~~~~~~m~HC 451 (471)
T PRK10883 435 VYFGQPSWAHFPFLFYS 451 (471)
T ss_pred EEecCCCCCCCcEEeec
Confidence 999987543 455544
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0013 Score=72.94 Aligned_cols=80 Identities=11% Similarity=0.008 Sum_probs=59.3
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCcce--ecccc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWF--TAGFE 170 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~--t~~~i 170 (551)
+||+. .|++++++|+++|+|+.|.-... ...+|+.|....- ..||.+-... ..-.|
T Consensus 196 iNG~~-~~~~~v~~G~~yRlRliNa~~~~--------------------~~~f~i~gH~~~VI~~DG~~v~p~~~~~l~i 254 (539)
T PLN02835 196 INGQT-QSTFSGDQGKTYMFRISNVGLST--------------------SLNFRIQGHTMKLVEVEGSHTIQNIYDSLDV 254 (539)
T ss_pred Ecccc-CceEEECCCCEEEEEEEEcCCCc--------------------cEEEEECCCEEEEEEECCccCCCceeeEEEE
Confidence 46654 47999999999999999986652 5778888766432 3788753222 22347
Q ss_pred CCCCCcceeeEEEEcCccCceeEEecc
Q 008840 171 EKGPTWTNETYHYHNMQQPGNTWYHDH 197 (551)
Q Consensus 171 ~pG~~~~~~~y~f~~~~~~Gt~wYH~H 197 (551)
.+|+++ +.-+++++.+|.||.+.-
T Consensus 255 ~~GqRy---dvlv~~~~~~g~y~i~a~ 278 (539)
T PLN02835 255 HVGQSV---AVLVTLNQSPKDYYIVAS 278 (539)
T ss_pred CcCceE---EEEEEcCCCCCcEEEEEE
Confidence 899988 888888888899999863
|
|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=98.01 E-value=3e-05 Score=66.10 Aligned_cols=83 Identities=14% Similarity=0.188 Sum_probs=52.9
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCCCcceeccccCCCCCcce
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYAKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p~~~~t~~~i~pG~~~~~ 178 (551)
-..|++++||+| +|+|.-.. ++++.++....+.. .+..+...-....+.||+++
T Consensus 16 P~~i~v~~G~~V--~~~N~~~~---------------------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~t~-- 70 (99)
T TIGR02656 16 PAKISIAAGDTV--EWVNNKGG---------------------PHNVVFDEDAVPAGVKELAKSLSHKDLLNSPGESY-- 70 (99)
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------CceEEECCCCCccchhhhcccccccccccCCCCEE--
Confidence 568999999985 66686433 57776654432211 00111100011236799988
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.|.. +|+|+|||-.| -.+||.|.|+|+
T Consensus 71 -~~tF~~---~G~y~y~C~~H------~~aGM~G~I~V~ 99 (99)
T TIGR02656 71 -EVTFST---PGTYTFYCEPH------RGAGMVGKITVE 99 (99)
T ss_pred -EEEeCC---CEEEEEEcCCc------cccCCEEEEEEC
Confidence 777764 99999999854 358999999985
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00064 Score=75.51 Aligned_cols=77 Identities=18% Similarity=0.122 Sum_probs=53.7
Q ss_pred cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCCcc
Q 008840 101 PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPTWT 177 (551)
Q Consensus 101 Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~~~ 177 (551)
++|.|++|+++|+|+.|..... ...+++.|....- ..||.+-.++. .-.|.||+++
T Consensus 203 ~~~~v~~g~~~RlRliNa~~~~--------------------~~~~~id~h~~~VIa~DG~~v~P~~v~~l~i~~GqR~- 261 (541)
T TIGR03388 203 QILHVEPGKTYRLRIASTTALA--------------------ALNFAIEGHKLTVVEADGNYVEPFTVKDIDIYSGETY- 261 (541)
T ss_pred eEEEECCCCEEEEEEEcccccc--------------------eEEEEECCCEEEEEEeCCEecccceeCeEEecCCCEE-
Confidence 4589999999999999985542 5666666654322 26887633222 2247899988
Q ss_pred eeeEEEEcCccC-ceeEEeccCCC
Q 008840 178 NETYHYHNMQQP-GNTWYHDHTMG 200 (551)
Q Consensus 178 ~~~y~f~~~~~~-Gt~wYH~H~~g 200 (551)
+.-+.+++.+ |.||.+.-..+
T Consensus 262 --dvlv~~~~~~~~~y~ira~~~~ 283 (541)
T TIGR03388 262 --SVLLTTDQDPSRNYWISVGVRG 283 (541)
T ss_pred --EEEEeCCCCCCCcEEEEEeccc
Confidence 8888887665 48999876543
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00041 Score=75.44 Aligned_cols=87 Identities=22% Similarity=0.277 Sum_probs=66.2
Q ss_pred CCceEEECCcccCc----eeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCC-CceEecEEEEccCceEEE
Q 008840 270 FGDVIVVNGKAWPR----MTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLG-KPVVTNDTVLAPAEIADV 343 (551)
Q Consensus 270 ~gd~~lVNG~~~P~----~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~-~P~~~~~l~l~pgeR~dV 343 (551)
.+..+.+||+.++. +.++. +++||+|.|-+. -...||+ ||+.|+|++.|..... .+..+|++.+.|++|..|
T Consensus 341 ~~~~~~~n~~~~~~~~~~~~~~~G~~~~~~i~n~~~-~~HP~Hl-Hg~~F~v~~~~~~~~~~~~~~kDTv~v~~~~~~~v 418 (451)
T COG2132 341 GGYVWAINGKAFDDNRVTLIAKAGTRERWVLTNDTP-MPHPFHL-HGHFFQVLSGDAPAPGAAPGWKDTVLVAPGERLLV 418 (451)
T ss_pred ccccccccCccCCCCcCceeecCCCEEEEEEECCCC-CccCeEE-cCceEEEEecCCCcccccCccceEEEeCCCeEEEE
Confidence 35679999998873 34555 899999999996 4455666 8999999999933222 346689999999999988
Q ss_pred EEEcCCCCCceEEEecC
Q 008840 344 VIDFSESTSDVAILAND 360 (551)
Q Consensus 344 lv~~~~~~g~~~~L~~~ 360 (551)
.++.+.+ | .|.+...
T Consensus 419 ~~~a~~~-g-~~~~HCH 433 (451)
T COG2132 419 RFDADYP-G-PWMFHCH 433 (451)
T ss_pred EEeCCCC-C-ceEEecc
Confidence 8888765 3 6766654
|
|
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00082 Score=74.98 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=52.6
Q ss_pred eeecC-eEEEEEEEecCC-----CceEEEEEcCCceEEEEEcCCCC-----------CCCceEecEEEEccCceEEEEEE
Q 008840 284 MTVRR-RKYRFRIINASN-----ARFFRFFFTNGLRFIHVGSDSAY-----------LGKPVVTNDTVLAPAEIADVVID 346 (551)
Q Consensus 284 ~~v~~-~~~RlRllNas~-----~~~~~l~l~~g~~~~via~DG~~-----------l~~P~~~~~l~l~pgeR~dVlv~ 346 (551)
+.++. +++.+.|.|... .-...+|| |||.|+|++...+. +..|...|++.+.++.-+-|-+.
T Consensus 441 ~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HL-HGH~F~Vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~gwvvIRF~ 519 (566)
T PLN02604 441 YRLQFNSTVDIILQNANTMNANNSETHPWHL-HGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFR 519 (566)
T ss_pred EEccCCCeEEEEEECCccccCCCCCCCCEEe-cCCceEEEEecCCCCCccccccccCCCCCCccceEEeCCCceEEEEEE
Confidence 44555 899999999752 12345566 89999999988442 23477789999999988877777
Q ss_pred cCCCCCceEEEecC
Q 008840 347 FSESTSDVAILAND 360 (551)
Q Consensus 347 ~~~~~g~~~~L~~~ 360 (551)
++++ | -..|+..
T Consensus 520 aDNP-G-~WlfHCH 531 (566)
T PLN02604 520 ADNP-G-VWAFHCH 531 (566)
T ss_pred CCCC-e-EeeEeec
Confidence 7664 3 5555554
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.003 Score=70.07 Aligned_cols=76 Identities=11% Similarity=0.016 Sum_probs=53.4
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCC-CCC-CCCCCCCcceec--cccCCCCC
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGI-DEP-ESDGYAKSWFTA--GFEEKGPT 175 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~-~~~-~~DG~p~~~~t~--~~i~pG~~ 175 (551)
.|+|++++|+++++|+.|.-... ...+++.|.. ..- +.||.+..++.. -.|.+|++
T Consensus 197 ~~~~~v~~G~~yRlRlINa~~~~--------------------~~~~~idgH~~~~VIa~DG~~~~P~~v~~l~l~~GqR 256 (538)
T TIGR03390 197 LPVIDVEPGKTYRLRFIGATALS--------------------LISLGIEDHENLTIIEADGSYTKPAKIDHLQLGGGQR 256 (538)
T ss_pred ceEEEECCCCEEEEEEEccCCce--------------------EEEEEECCCCeEEEEEeCCCCCCceEeCeEEEccCCE
Confidence 47999999999999999986642 4566766654 221 378876433322 24789999
Q ss_pred cceeeEEEEcCcc-------CceeEEeccC
Q 008840 176 WTNETYHYHNMQQ-------PGNTWYHDHT 198 (551)
Q Consensus 176 ~~~~~y~f~~~~~-------~Gt~wYH~H~ 198 (551)
+ +.-+.+++. +|-||...-.
T Consensus 257 y---dVlv~~~~~~~~~~~~~~~Y~ir~~~ 283 (538)
T TIGR03390 257 Y---SVLFKAKTEDELCGGDKRQYFIQFET 283 (538)
T ss_pred E---EEEEECCCccccccCCCCcEEEEEee
Confidence 8 788888754 4889987653
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.015 Score=64.38 Aligned_cols=202 Identities=16% Similarity=0.162 Sum_probs=117.3
Q ss_pred ceEEECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEE-EcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHV-GSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~vi-a~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..++|||+. -|.|+++. +++++++.|--.. ...||. ||..+.-- ..||.+. .+-.|.||+++..-++++
T Consensus 46 ~~~~vNG~~PGP~I~~~~GD~v~V~v~N~L~~-~ttiHW-HGl~~~~~~~~DGv~g------tQcpI~PG~sftY~F~~~ 117 (545)
T PLN02168 46 QVIVINDMFPGPLLNATANDVINVNIFNNLTE-PFLMTW-NGLQLRKNSWQDGVRG------TNCPILPGTNWTYRFQVK 117 (545)
T ss_pred EEEEECCcCCCCcEEEECCCEEEEEEEeCCCC-CccEee-CCccCCCCCCcCCCCC------CcCCCCCCCcEEEEEEeC
Confidence 579999995 68999987 8999999999854 457788 78433211 1488642 235799999999999886
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeeccc------
Q 008840 349 ESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTS------ 422 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~------ 422 (551)
+.+| +|+-.+....++..|. --.+.|.+... + ..| ++.. ..+..+.|.++-.
T Consensus 118 ~q~G-T~WYHsH~~~Q~~~GL--------~G~lII~~~~~-~--~~p-----~~~~-----d~e~~l~l~Dw~~~~~~~~ 175 (545)
T PLN02168 118 DQIG-SYFYFPSLLLQKAAGG--------YGAIRIYNPEL-V--PVP-----FPKP-----DEEYDILIGDWFYADHTVM 175 (545)
T ss_pred CCCc-eEEEecChhhhhhCcc--------eeEEEEcCCcc-c--CcC-----cCcc-----cceeeEEEEecCCCCHHHH
Confidence 4444 9998887544333331 11234433211 1 111 0000 0111122221100
Q ss_pred ----CCC----CcceEEEcccccCCC-CCCCcceeeeEEEEeeeeee-eeeccccCceeeeeeeeccCCccCCCCcCCCc
Q 008840 423 ----NTG----KPTHLLINAKTLEDP-VTETPKTLDQTELVNLEEFK-ACMNKINDAIKCNLSKHACGKKQAVPVHEQGW 492 (551)
Q Consensus 423 ----~~g----~~~~~~INg~~f~~~-~~~~~~~~~~~~l~n~~~~~-~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~w 492 (551)
..+ .+..++|||+.-..+ ..-.+.....++++|..... ..++..+|.+ .+.. .+|....| .-
T Consensus 176 ~~~~~~g~~~~~~d~~liNG~~~~~~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~~--tVIa-~DG~~v~p-----~~ 247 (545)
T PLN02168 176 RASLDNGHSLPNPDGILFNGRGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDM--LLVE-TEGTYVQK-----RV 247 (545)
T ss_pred HhhhhcCCCCCCCCEEEEeccCCCcceEEeCCCCEEEEEEEeccCCceEEEEECCcEE--EEEE-ECCeECCC-----ce
Confidence 001 234589999852222 11123336678999986543 2244456644 3333 46743332 22
Q ss_pred CccEEeCCCcEEEEEEEEe
Q 008840 493 KNVYKITPGYVTRILVRFS 511 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~ 511 (551)
.|++.+.+||+..|+++++
T Consensus 248 ~~~l~i~~GqRydvlv~a~ 266 (545)
T PLN02168 248 YSSLDIHVGQSYSVLVTAK 266 (545)
T ss_pred eeEEEEcCCceEEEEEEcC
Confidence 5999999999999999997
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00041 Score=59.04 Aligned_cols=81 Identities=21% Similarity=0.240 Sum_probs=50.4
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC--CC-CCCCcceeccccCCCCCc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE--SD-GYAKSWFTAGFEEKGPTW 176 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~--~D-G~p~~~~t~~~i~pG~~~ 176 (551)
-..|++++||+| +|.|.-.. ++++.+=-...+.. .+ ..+.. ....+.||+++
T Consensus 16 P~~i~V~~G~tV--~~~n~~~~---------------------~Hnv~~~~~~~~~~~~~~~~~~~~--~~~~~~~G~~~ 70 (99)
T PF00127_consen 16 PSEITVKAGDTV--TFVNNDSM---------------------PHNVVFVADGMPAGADSDYVPPGD--SSPLLAPGETY 70 (99)
T ss_dssp SSEEEEETTEEE--EEEEESSS---------------------SBEEEEETTSSHTTGGHCHHSTTC--EEEEBSTTEEE
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------CceEEEecccccccccccccCccc--cceecCCCCEE
Confidence 579999999975 56675332 46665532111000 00 00100 11136789887
Q ss_pred ceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 177 TNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 177 ~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.|. .+|+|.|+|-.| ..+||.|.|+|+
T Consensus 71 ---~~tF~---~~G~y~y~C~PH------~~~GM~G~i~V~ 99 (99)
T PF00127_consen 71 ---SVTFT---KPGTYEYYCTPH------YEAGMVGTIIVE 99 (99)
T ss_dssp ---EEEEE---SSEEEEEEETTT------GGTTSEEEEEEE
T ss_pred ---EEEeC---CCeEEEEEcCCC------cccCCEEEEEEC
Confidence 78887 799999999753 247999999996
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.016 Score=64.20 Aligned_cols=202 Identities=15% Similarity=0.180 Sum_probs=117.2
Q ss_pred ceEEECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEE-EcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHV-GSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~vi-a~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..++|||+. -|.|+++. +++++++.|--. ....||. ||..+.-- ..||... . +-.|.||+.+.--++++
T Consensus 36 ~~~~vNGq~PGP~I~~~~GD~v~V~v~N~L~-~~ttiHW-HGl~q~~~~~~DGv~~-----t-qcPI~PG~sftY~F~~~ 107 (536)
T PLN02792 36 RGILINGQFPGPEIRSLTNDNLVINVHNDLD-EPFLLSW-NGVHMRKNSYQDGVYG-----T-TCPIPPGKNYTYDFQVK 107 (536)
T ss_pred EEEEECCCCCCCcEEEECCCEEEEEEEeCCC-CCcCEeC-CCcccCCCCccCCCCC-----C-cCccCCCCcEEEEEEeC
Confidence 589999995 69999987 899999999975 4556777 67443222 2699543 1 25789999999888886
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc-------
Q 008840 349 ESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT------- 421 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~------- 421 (551)
+..| +|+-.+....+...|.. -.+.+..... ++ .| ++.. ..+..+.|.++-
T Consensus 108 ~q~G-T~WYHsH~~~q~~~Gl~--------G~liI~~~~~-~~--~p-----~~~~-----d~e~~i~l~Dw~~~~~~~~ 165 (536)
T PLN02792 108 DQVG-SYFYFPSLAVQKAAGGY--------GSLRIYSLPR-IP--VP-----FPEP-----AGDFTFLIGDWYRRNHTTL 165 (536)
T ss_pred CCcc-ceEEecCcchhhhcccc--------cceEEeCCcc-cC--cC-----CCcc-----cceeEEEecccccCCHHHH
Confidence 4444 89988875443322211 1133322111 11 11 1100 001122222110
Q ss_pred -------cCCC-CcceEEEcccccCCC--CCCCcceeeeEEEEeeeeee-eeeccccCceeeeeeeeccCCccCCCCcCC
Q 008840 422 -------SNTG-KPTHLLINAKTLEDP--VTETPKTLDQTELVNLEEFK-ACMNKINDAIKCNLSKHACGKKQAVPVHEQ 490 (551)
Q Consensus 422 -------~~~g-~~~~~~INg~~f~~~--~~~~~~~~~~~~l~n~~~~~-~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~ 490 (551)
...+ .+..++|||+..... ..-.+.....++|+|..... ..+...+|.+ .+.. .+|....|
T Consensus 166 ~~~~~~g~~~~~~~d~~liNG~~~~~~~~~~v~~Gk~yRlRliNa~~~~~~~f~i~gH~~--tVI~-~DG~~v~p----- 237 (536)
T PLN02792 166 KKILDGGRKLPLMPDGVMINGQGVSYVYSITVDKGKTYRFRISNVGLQTSLNFEILGHQL--KLIE-VEGTHTVQ----- 237 (536)
T ss_pred HHHhhccCcCCCCCCEEEEeccCCCCcceEEECCCCEEEEEEEEcCCCceEEEEECCcEE--EEEE-eCCccCCC-----
Confidence 0001 234689999853221 11123346788999987543 2344456644 3433 46643322
Q ss_pred CcCccEEeCCCcEEEEEEEEe
Q 008840 491 GWKNVYKITPGYVTRILVRFS 511 (551)
Q Consensus 491 ~wkDTV~v~pg~~v~i~~~f~ 511 (551)
.-.|++.|.+||++.|+++.+
T Consensus 238 ~~~~~l~i~~GqRydVlV~a~ 258 (536)
T PLN02792 238 SMYTSLDIHVGQTYSVLVTMD 258 (536)
T ss_pred cceeEEEEccCceEEEEEEcC
Confidence 235999999999999999987
|
|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0014 Score=53.95 Aligned_cols=74 Identities=19% Similarity=0.283 Sum_probs=49.3
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|++++||+| +|.|.-.. ++++++....... .+ +....+.+|++|
T Consensus 10 P~~i~v~~GdtV--t~~N~d~~---------------------~Hnv~~~~g~~~~-~~------~~~~~~~~g~~~--- 56 (83)
T TIGR02657 10 TPELHVKVGDTV--TWINREAM---------------------PHNVHFVAGVLGE-AA------LKGPMMKKEQAY--- 56 (83)
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------CccEEecCCCCcc-cc------ccccccCCCCEE---
Confidence 578999999986 56787443 6888876532111 00 111124466654
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|+.+ .+|+|-|||=.|. .|.|.++|+
T Consensus 57 --~~tf~-~~G~y~y~C~~Hp--------~M~G~v~V~ 83 (83)
T TIGR02657 57 --SLTFT-EAGTYDYHCTPHP--------FMRGKVVVE 83 (83)
T ss_pred --EEECC-CCEEEEEEcCCCC--------CCeEEEEEC
Confidence 55554 7999999999974 499999985
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.016 Score=64.48 Aligned_cols=202 Identities=15% Similarity=0.176 Sum_probs=118.7
Q ss_pred ceEEECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEE-EEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIH-VGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~v-ia~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..++|||+. .|.|+++. +++++++.|.-. ....+|. ||..+.- -..||.+. ..-.|.||+.+.--++..
T Consensus 47 ~~~~iNGq~PGP~I~~~~GD~v~V~v~N~l~-~~ttiHW-HGi~q~~~~~~DGv~~------TQcpI~PG~sf~Y~F~~~ 118 (552)
T PLN02354 47 QVILINGQFPGPNINSTSNNNIVINVFNNLD-EPFLLTW-SGIQQRKNSWQDGVPG------TNCPIPPGTNFTYHFQPK 118 (552)
T ss_pred EEEEECCCCcCCcEEEeCCCEEEEEEEECCC-CCccccc-ccccCCCCcccCCCcC------CcCCCCCCCcEEEEEEeC
Confidence 589999995 69999987 899999999984 4456777 6754332 23688542 345899999999888875
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc-------
Q 008840 349 ESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT------- 421 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~------- 421 (551)
+..| +|+-.+....++..|.. -.+.|.+... . ..| ++. ...+..+.+.++-
T Consensus 119 ~q~G-T~WYHsH~~~Q~~~Gl~--------G~lII~~~~~-~--~~p-----~~~-----~d~e~~l~l~Dw~~~~~~~~ 176 (552)
T PLN02354 119 DQIG-SYFYYPSTGMHRAAGGF--------GGLRVNSRLL-I--PVP-----YAD-----PEDDYTVLIGDWYTKSHTAL 176 (552)
T ss_pred CCCc-ceEEecCccceecCCcc--------ceEEEcCCcC-C--CCC-----CCC-----cCceEEEEeeeeccCCHHHH
Confidence 4444 89988765444433321 1234433211 0 011 110 0111222222210
Q ss_pred -------cCCCCcceEEEcccccCC-----CC-CCCcceeeeEEEEeeeeeee-eeccccCceeeeeeeeccCCccCCCC
Q 008840 422 -------SNTGKPTHLLINAKTLED-----PV-TETPKTLDQTELVNLEEFKA-CMNKINDAIKCNLSKHACGKKQAVPV 487 (551)
Q Consensus 422 -------~~~g~~~~~~INg~~f~~-----~~-~~~~~~~~~~~l~n~~~~~~-~~~~~~~~~~~~v~~~~~G~~~~~~~ 487 (551)
...+.+...+|||+.... +. .-.+.....++|+|...... .++..+|.+ .+.. .+|....|
T Consensus 177 ~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~v~~Gk~yRlRiINa~~~~~~~f~IdgH~~--tVIa-~DG~~v~p-- 251 (552)
T PLN02354 177 KKFLDSGRTLGRPDGVLINGKSGKGDGKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKM--KLVE-MEGSHVLQ-- 251 (552)
T ss_pred HHHHhcCCCCCCCCeEEEeCCcCCCCCCCceEEEECCCCEEEEEEEecCCCceEEEEECCceE--EEEE-eCCcccCC--
Confidence 011234568999985321 11 11222366789998775432 244456643 3333 46743322
Q ss_pred cCCCcCccEEeCCCcEEEEEEEEe
Q 008840 488 HEQGWKNVYKITPGYVTRILVRFS 511 (551)
Q Consensus 488 ~e~~wkDTV~v~pg~~v~i~~~f~ 511 (551)
.-.|++.|.+||+..|+++++
T Consensus 252 ---~~~~~l~i~~GqRydVlv~a~ 272 (552)
T PLN02354 252 ---NDYDSLDVHVGQCFSVLVTAN 272 (552)
T ss_pred ---cceeEEEEccCceEEEEEECC
Confidence 236999999999999999987
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.018 Score=63.75 Aligned_cols=202 Identities=16% Similarity=0.189 Sum_probs=118.9
Q ss_pred ceEEECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEE-EEEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFI-HVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~-via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..++|||+. .|.|+++. +++++++.|.-. ....+|. ||..+. --..||.+. . +-.|.||+.+.--++++
T Consensus 48 ~~~~vNG~~PGP~I~~~~GD~v~V~V~N~L~-~~ttiHW-HGi~q~~~~~~DGv~~-----t-QcpI~PG~sftY~F~~~ 119 (543)
T PLN02991 48 QGILINGKFPGPDIISVTNDNLIINVFNHLD-EPFLISW-SGIRNWRNSYQDGVYG-----T-TCPIPPGKNYTYALQVK 119 (543)
T ss_pred EEEEEcCCCCCCcEEEECCCEEEEEecCCCC-CCccEEE-CCcccCCCccccCCCC-----C-CCccCCCCcEEEEEEeC
Confidence 589999995 69999987 899999999984 4557788 785532 223699642 1 45799999999888886
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc-------
Q 008840 349 ESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT------- 421 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~------- 421 (551)
+.+| +|+-.+....+...| -.-.+.|..... + ..|. +.. .....+.|.++-
T Consensus 120 ~q~G-T~WYHsH~~~q~~~G--------l~G~lIV~~~~~-~--~~p~-----~~~-----d~d~~i~l~DW~~~~~~~~ 177 (543)
T PLN02991 120 DQIG-SFYYFPSLGFHKAAG--------GFGAIRISSRPL-I--PVPF-----PAP-----ADDYTVLIGDWYKTNHKDL 177 (543)
T ss_pred CCCc-ceEEecCcchhhhCC--------CeeeEEEeCCcc-c--Cccc-----ccc-----cceeEEEecceecCCHHHH
Confidence 4444 999888754332222 111244433211 1 1111 000 011122222110
Q ss_pred ----cCCC---CcceEEEcccccCCCCCCCcceeeeEEEEeeeeee-eeeccccCceeeeeeeeccCCccCCCCcCCCcC
Q 008840 422 ----SNTG---KPTHLLINAKTLEDPVTETPKTLDQTELVNLEEFK-ACMNKINDAIKCNLSKHACGKKQAVPVHEQGWK 493 (551)
Q Consensus 422 ----~~~g---~~~~~~INg~~f~~~~~~~~~~~~~~~l~n~~~~~-~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wk 493 (551)
...+ .+...+|||+.......-.+.....++|+|..... ..+...+|.+ .+.. .+|.... +.-.
T Consensus 178 ~~~~~~~~~~~~~d~~liNG~~~~~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~--tVIa-~DG~~~~-----p~~~ 249 (543)
T PLN02991 178 RAQLDNGGKLPLPDGILINGRGSGATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTM--KLVE-VEGTHTI-----QTPF 249 (543)
T ss_pred HHHhhcCCCCCCCCEEEEccCCCCceEEECCCCEEEEEEEeccCCeeEEEEECCCEE--EEEE-eCCcccc-----ceee
Confidence 0011 23468999985432222223335678999987543 2344556744 3433 4663222 2346
Q ss_pred ccEEeCCCcEEEEEEEEe
Q 008840 494 NVYKITPGYVTRILVRFS 511 (551)
Q Consensus 494 DTV~v~pg~~v~i~~~f~ 511 (551)
|++.+.+||+..|+++++
T Consensus 250 ~~l~i~~GQRydvlv~a~ 267 (543)
T PLN02991 250 SSLDVHVGQSYSVLITAD 267 (543)
T ss_pred eEEEEcCCcEEEEEEECC
Confidence 899999999999999987
|
|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0004 Score=59.64 Aligned_cols=70 Identities=19% Similarity=0.180 Sum_probs=43.7
Q ss_pred cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceee
Q 008840 101 PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNET 180 (551)
Q Consensus 101 Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~ 180 (551)
.+|++++|++++|+++|.-.. ++.+...++. +.. .+.||++. +
T Consensus 35 ~~i~v~~G~~v~l~~~N~~~~---------------------~h~~~i~~~~------------~~~-~l~~g~~~---~ 77 (104)
T PF13473_consen 35 STITVKAGQPVTLTFTNNDSR---------------------PHEFVIPDLG------------ISK-VLPPGETA---T 77 (104)
T ss_dssp -EEEEETTCEEEEEEEE-SSS----------------------EEEEEGGGT------------EEE-EE-TT-EE---E
T ss_pred CEEEEcCCCeEEEEEEECCCC---------------------cEEEEECCCc------------eEE-EECCCCEE---E
Confidence 499999999999999998554 4555555422 221 47899988 9
Q ss_pred EEEEcCccCceeEEeccCCCchhhhhhccceEEEEE
Q 008840 181 YHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYIL 216 (551)
Q Consensus 181 y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV 216 (551)
+.|+. ..+|+|=|+|-.|+ . |.|-|||
T Consensus 78 ~~f~~-~~~G~y~~~C~~~~-------~-m~G~liV 104 (104)
T PF13473_consen 78 VTFTP-LKPGEYEFYCTMHP-------N-MKGTLIV 104 (104)
T ss_dssp EEEEE--S-EEEEEB-SSS--------T-TB-----
T ss_pred EEEcC-CCCEEEEEEcCCCC-------c-ceecccC
Confidence 99987 49999999999864 3 6777765
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0045 Score=54.22 Aligned_cols=76 Identities=16% Similarity=0.119 Sum_probs=48.5
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEee-CCCCCCCCCCCCCCcceeccccCCCCCcce
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHL-HGGIDEPESDGYAKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~-HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~ 178 (551)
...|+|++||+|+..+.|. ++++.+ .+.. .+|... +.. .+|++|
T Consensus 14 P~~v~V~~GdTV~f~n~d~------------------------~Hnv~~~~~~~----p~g~~~--~~s---~~g~~~-- 58 (116)
T TIGR02375 14 PAYIRAAPGDTVTFVPTDK------------------------GHNVETIKGMI----PEGAEA--FKS---KINEEY-- 58 (116)
T ss_pred CCEEEECCCCEEEEEECCC------------------------CeeEEEccCCC----cCCccc--ccC---CCCCEE--
Confidence 5689999999876666553 344443 2211 122211 221 245554
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
++.| + .+|+|-|+|=.|. .+||.|.|+|.++.
T Consensus 59 -~~tF--~-~~G~Y~Y~C~pH~------~~GM~G~V~Vg~~~ 90 (116)
T TIGR02375 59 -TVTV--T-EEGVYGVKCTPHY------GMGMVALIQVGDPP 90 (116)
T ss_pred -EEEe--C-CCEEEEEEcCCCc------cCCCEEEEEECCCC
Confidence 5555 4 7999999999764 58999999999753
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0046 Score=54.84 Aligned_cols=76 Identities=21% Similarity=0.301 Sum_probs=50.8
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
--+|+|++||+ |+|.|.-.. .+|++.=+...+ +|.-. + ...+|++|
T Consensus 53 PA~v~v~pGDT--Vtw~~~d~~---------------------~Hnv~~~~~~~~---~g~~~--~---~~~~~~s~--- 98 (128)
T COG3794 53 PAEVTVKPGDT--VTWVNTDSV---------------------GHNVTAVGGMDP---EGSGT--L---KAGINESF--- 98 (128)
T ss_pred CcEEEECCCCE--EEEEECCCC---------------------CceEEEeCCCCc---ccccc--c---ccCCCcce---
Confidence 34899999997 667776553 477776555421 22221 1 12345655
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
++.|. .+|+|-|.|-.| ..+||.|.|+|++
T Consensus 99 ~~Tfe---~~G~Y~Y~C~PH------~~~gM~G~IvV~~ 128 (128)
T COG3794 99 THTFE---TPGEYTYYCTPH------PGMGMKGKIVVGE 128 (128)
T ss_pred EEEec---ccceEEEEeccC------CCCCcEEEEEeCC
Confidence 55553 599999999986 3589999999974
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0033 Score=69.39 Aligned_cols=80 Identities=15% Similarity=0.125 Sum_probs=56.6
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-..|+|++||+|+++++|.-.. .-.+ ||..++.. |.- + .+.||+.-
T Consensus 554 p~~i~Vk~GDeVt~~lTN~d~~---------------------~DVi--HGF~Ip~~--nI~---~---dv~PG~t~--- 599 (635)
T PRK02888 554 LREFTVKQGDEVTVIVTNLDKV---------------------EDLT--HGFAIPNY--GVN---M---EVAPQATA--- 599 (635)
T ss_pred CceEEecCCCEEEEEEEeCCcc---------------------cccc--cceeeccc--Ccc---E---EEcCCceE---
Confidence 4469999999999999994221 1112 55555432 111 1 36688887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+..|.++ .+|+|||||...-.. .| .+|.|.++|+
T Consensus 600 svtF~ad-kPGvy~~~CtefCGa-~H--~~M~G~~iVe 633 (635)
T PRK02888 600 SVTFTAD-KPGVYWYYCTWFCHA-LH--MEMRGRMLVE 633 (635)
T ss_pred EEEEEcC-CCEEEEEECCccccc-Cc--ccceEEEEEE
Confidence 8999996 999999999975432 34 5999999998
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.13 Score=57.54 Aligned_cols=86 Identities=15% Similarity=0.175 Sum_probs=63.3
Q ss_pred CceEEECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEE-EEcCCCCCCCceEecEEEEccCceEEEEEEc
Q 008840 271 GDVIVVNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIH-VGSDSAYLGKPVVTNDTVLAPAEIADVVIDF 347 (551)
Q Consensus 271 gd~~lVNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~v-ia~DG~~l~~P~~~~~l~l~pgeR~dVlv~~ 347 (551)
...++|||+. .|.|+++. +++++++.|.-......+|. ||....- -..||..- +..-.|.||+.+...+++
T Consensus 42 ~~v~~vNg~~pGP~i~~~~Gd~v~v~v~N~l~~~~tsiHw-HGl~~~~~~~~DGv~g-----vtq~pI~PG~s~~Y~f~~ 115 (574)
T PLN02191 42 GAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLVIHW-HGIRQKGSPWADGAAG-----VTQCAINPGETFTYKFTV 115 (574)
T ss_pred eeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEEC-CCCCCCCCccccCCCc-----cccCCcCCCCeEEEEEEC
Confidence 3589999995 68999987 89999999997655677888 7854321 12477643 233569999999999998
Q ss_pred CCCCCceEEEecCCCCC
Q 008840 348 SESTSDVAILANDAPYP 364 (551)
Q Consensus 348 ~~~~g~~~~L~~~~~~~ 364 (551)
++. ++|+-.+....+
T Consensus 116 ~~~--GT~wYHsH~~~q 130 (574)
T PLN02191 116 EKP--GTHFYHGHYGMQ 130 (574)
T ss_pred CCC--eEEEEeeCcHHH
Confidence 753 499988875433
|
|
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.013 Score=51.20 Aligned_cols=75 Identities=21% Similarity=0.306 Sum_probs=47.7
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-..|+|++||+|+ |+|+.... ++++..=+. ...|- ......+|++|
T Consensus 41 P~~ltV~~GdTVt--w~~~~d~~--------------------~HnV~s~~~---~~f~s------~~~~~~~G~t~--- 86 (115)
T TIGR03102 41 PPAIRVDPGTTVV--WEWTGEGG--------------------GHNVVSDGD---GDLDE------SERVSEEGTTY--- 86 (115)
T ss_pred CCEEEECCCCEEE--EEECCCCC--------------------CEEEEECCC---CCccc------cccccCCCCEE---
Confidence 5689999999866 66543221 566654110 11110 00013577776
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| + .+|+|-|+|=.|. .+||.|.|+|+
T Consensus 87 s~Tf--~-~~G~Y~Y~C~pH~------~~gM~G~I~V~ 115 (115)
T TIGR03102 87 EHTF--E-EPGIYLYVCVPHE------ALGMKGAVVVE 115 (115)
T ss_pred EEEe--c-CCcEEEEEccCCC------CCCCEEEEEEC
Confidence 6666 3 7999999999874 47999999985
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.32 Score=54.49 Aligned_cols=204 Identities=15% Similarity=0.131 Sum_probs=116.5
Q ss_pred ceEEECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEE-EEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIH-VGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~v-ia~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..++|||+. .|.|+++. +++++++.|--. ....+|. ||..+.- -..||... ..-.|.||+.+.--++++
T Consensus 49 ~vi~vNGq~PGPtI~~~~GD~v~V~V~N~L~-~~ttIHW-HGl~q~~t~w~DGv~~------TQcPI~PG~sftY~F~~~ 120 (596)
T PLN00044 49 EAIGINGQFPGPALNVTTNWNLVVNVRNALD-EPLLLTW-HGVQQRKSAWQDGVGG------TNCAIPAGWNWTYQFQVK 120 (596)
T ss_pred EEEEEcCcCCCCcEEEECCCEEEEEEEeCCC-CCccEEE-CCccCCCCccccCCCC------CcCCcCCCCcEEEEEEeC
Confidence 479999995 79999987 899999999975 4567888 7855432 23688532 346899999999999986
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc-------
Q 008840 349 ESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT------- 421 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~------- 421 (551)
+..| +|+-.+....+...|. --.|.|..+.. . ..| ++..+ ..+..+.|.++-
T Consensus 121 dq~G-T~WYHsH~~~Q~~~Gl--------~GalII~~~~~-~--~~P-----~~~~~----~~e~~i~l~DW~~~~~~~~ 179 (596)
T PLN00044 121 DQVG-SFFYAPSTALHRAAGG--------YGAITINNRDV-I--PIP-----FGFPD----GGDITLFIADWYARDHRAL 179 (596)
T ss_pred CCCc-eeEeeccchhhhhCcC--------eeEEEEcCccc-c--ccc-----ccCCc----ccceEEEecccccCCHHHH
Confidence 4444 8988876544333331 12244443211 0 111 11000 001122222210
Q ss_pred ----c---CCCCcceEEEcccccC---CCC----CC------CcceeeeEEEEeeeeeeee-eccccCceeeeeeeeccC
Q 008840 422 ----S---NTGKPTHLLINAKTLE---DPV----TE------TPKTLDQTELVNLEEFKAC-MNKINDAIKCNLSKHACG 480 (551)
Q Consensus 422 ----~---~~g~~~~~~INg~~f~---~~~----~~------~~~~~~~~~l~n~~~~~~~-~~~~~~~~~~~v~~~~~G 480 (551)
. ..+.+...+|||+.-. ... .. .+.....++|+|....... +..-+|.+ .+.. .+|
T Consensus 180 ~~~l~~g~~~~~~d~~lING~g~~~~n~~~~~~~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~m--tVIa-~DG 256 (596)
T PLN00044 180 RRALDAGDLLGAPDGVLINAFGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNL--LLVE-AEG 256 (596)
T ss_pred HHHHhcCCCCCCCCceEEcccCccccCCccccCCCccceEEECCCCEEEEEEEEccCCceEEEEECCCEE--EEEE-eCC
Confidence 0 0122344678986321 100 00 1112556888887643221 33445643 3333 366
Q ss_pred CccCCCCcCCCcCccEEeCCCcEEEEEEEEec
Q 008840 481 KKQAVPVHEQGWKNVYKITPGYVTRILVRFSY 512 (551)
Q Consensus 481 ~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~ 512 (551)
... ++.-.|++.+.+||++.|+++++.
T Consensus 257 ~~v-----~P~~vd~i~I~~GQRydVLV~a~q 283 (596)
T PLN00044 257 SYT-----SQQNYTNLDIHVGQSYSFLLTMDQ 283 (596)
T ss_pred ccc-----CceeeeeEEEcCCceEEEEEECCC
Confidence 333 234469999999999999999983
|
|
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0065 Score=56.34 Aligned_cols=76 Identities=17% Similarity=0.182 Sum_probs=55.6
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCC
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPT 175 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~ 175 (551)
.-|+|.+++|+++++|+.|.-... ...+++.|....- ..||.+-.++. .-.|.||++
T Consensus 58 ~~~~~~v~~g~~~rlRliNa~~~~--------------------~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R 117 (159)
T PF00394_consen 58 EPPVIKVKPGERYRLRLINAGAST--------------------SFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQR 117 (159)
T ss_dssp TSGEEEEETTTEEEEEEEEESSS---------------------BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEE
T ss_pred ccceEEEcCCcEEEEEEEeccCCe--------------------eEEEEeeccceeEeeeccccccccccceEEeeCCeE
Confidence 468999999999999999986642 5678888764322 27887733222 224789998
Q ss_pred cceeeEEEEcCccCceeEEecc
Q 008840 176 WTNETYHYHNMQQPGNTWYHDH 197 (551)
Q Consensus 176 ~~~~~y~f~~~~~~Gt~wYH~H 197 (551)
+ +.-+.+++.+|.||.++.
T Consensus 118 ~---dvlv~~~~~~g~y~i~~~ 136 (159)
T PF00394_consen 118 Y---DVLVTADQPPGNYWIRAS 136 (159)
T ss_dssp E---EEEEEECSCSSEEEEEEE
T ss_pred E---EEEEEeCCCCCeEEEEEe
Confidence 8 888888766999999994
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.069 Score=50.61 Aligned_cols=109 Identities=22% Similarity=0.280 Sum_probs=64.1
Q ss_pred cEEEeecCCCCCCC-CCcEEEEECCCEEEEEEEeCCCCCCCCCC---CCCCCCCCCCCCCCCCeEEeeCCCC--CCCCCC
Q 008840 85 PVFAFGTSSLTASV-PGPTIEALHGIDTYVTWQNHLPPNHILPI---DPTIPTAMPSNKKGVPTVVHLHGGI--DEPESD 158 (551)
Q Consensus 85 ~~~~y~~~~~ng~~-PGPti~v~~Gd~v~v~l~N~L~~~~~~~~---~~~~~~~~~~~~~~~~t~iH~HG~~--~~~~~D 158 (551)
....|| |.. --++|.+-.|-+|.|+|.|.-...|.+-+ ++..+ . .-.+-.+|-- ..+.+
T Consensus 74 ~~~nfn-----Gts~G~m~i~VPAGw~V~i~f~N~~~l~Hnl~iv~~~~~~p----~-----~~~i~~DgkIl~~~G~s- 138 (196)
T PF06525_consen 74 NPFNFN-----GTSNGQMTIYVPAGWNVQITFTNQESLPHNLVIVQNDTPTP----N-----NPPISSDGKILLYVGAS- 138 (196)
T ss_pred Cceeee-----cccCCcEEEEEcCCCEEEEEEEcCCCCCeeEEEEeCCCCCC----C-----ccccCCCCceeeeccCC-
Confidence 355665 433 35899999999999999998555443321 11111 0 1111111110 11111
Q ss_pred CCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCC
Q 008840 159 GYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP 219 (551)
Q Consensus 159 G~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp 219 (551)
+++ +....|.+|++. .-.|.. -++|.|||=|-.-| |..+||++-|+|.+.
T Consensus 139 --~~~-~~~~GI~~G~s~---~~~~~~-l~aG~YwlvC~ipG----HA~sGMw~~LiVs~~ 188 (196)
T PF06525_consen 139 --PGN-YTSNGISSGQSA---SGVYND-LPAGYYWLVCGIPG----HAESGMWGVLIVSSN 188 (196)
T ss_pred --CCc-cccCCccCCcee---eEEEcc-CCCceEEEEccCCC----hhhcCCEEEEEEecC
Confidence 111 122246678876 444544 38999999999876 567999999999954
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0083 Score=52.71 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=33.5
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+.||++.+..++... .+| |.||||.-.|+-.||.+.|.|-
T Consensus 73 ~i~pG~~~~Y~~~~~~-------------~~Gt~wYH~H~~~~~~~GL~G~~iV~ 114 (117)
T PF07732_consen 73 PIAPGESFTYEFTANQ-------------QAGTYWYHSHVHGQQVMGLYGAIIVE 114 (117)
T ss_dssp SBSTTEEEEEEEEESS-------------CSEEEEEEECSTTHHHTTEEEEEEEE
T ss_pred eEEeecceeeeEeeec-------------cccceeEeeCCCchhcCcCEEEEEEc
Confidence 4788999888666651 257 9999999999889999999874
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.05 Score=50.56 Aligned_cols=100 Identities=19% Similarity=0.285 Sum_probs=57.3
Q ss_pred cEEEEECCCEEEEEEEeCCCCCCCC---CCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcc
Q 008840 101 PTIEALHGIDTYVTWQNHLPPNHIL---PIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWT 177 (551)
Q Consensus 101 Pti~v~~Gd~v~v~l~N~L~~~~~~---~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~ 177 (551)
+||.+-.|=.|.|+|.|.-...|-+ +.++..+.. +. .....-.+-+-|...+ ++..+ .+..|.+-
T Consensus 85 mtIyiPaGw~V~V~f~N~e~~pHnl~iv~n~t~~P~~-~~-~s~dgkil~~vG~~~s--------~~~~N-Gi~~Gqs~- 152 (195)
T TIGR03094 85 MTIYLPAGWNVYVTFTNYESLPHNLKLLPNSTQTPRG-PI-WAHTGKIINSTGATTS--------IYYGN-GISSGHSR- 152 (195)
T ss_pred eEEEEeCCCEEEEEEEcCCCCCccEEEecCCCCCCCc-cc-cccCceeEeecccccC--------ccccc-ccccccee-
Confidence 8999999999999999986543322 222211100 00 0000112222222211 11112 24455553
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCC
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP 219 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp 219 (551)
.-.|.+ -++|+|||=|-.-| |..+||+|-+||.+.
T Consensus 153 --sg~~~~-~~~G~YwlvCgipG----HAesGMw~~lIVSs~ 187 (195)
T TIGR03094 153 --SGWWND-TSAGKYWLVCGITG----HAESGMWAVVIVSSN 187 (195)
T ss_pred --EEEecc-CCCeeEEEEcccCC----hhhcCcEEEEEEecC
Confidence 344555 49999999999876 456999999999853
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.99 Score=50.22 Aligned_cols=204 Identities=16% Similarity=0.249 Sum_probs=119.9
Q ss_pred CceEEECCc-ccCceeecC-eEEEEEEEecCCCceEEEEEcCCceE-EEEEcCCCCCCCceEecEEEEccCceEEEEEEc
Q 008840 271 GDVIVVNGK-AWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRF-IHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDF 347 (551)
Q Consensus 271 gd~~lVNG~-~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~-~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~ 347 (551)
-..++|||+ +.|.|.+.. ..+.++++|-.. ..+.||. ||... .--..||.++ ..-.|.|||.+---++.
T Consensus 47 ~~vi~iNG~fPGP~I~~~~gD~ivV~v~N~~~-~~~sihW-hGv~q~kn~w~DG~~~------TqCPI~Pg~~~tY~F~v 118 (563)
T KOG1263|consen 47 KQVITINGQFPGPTINAEEGDTIVVNVVNRLD-EPFSIHW-HGVRQRKNPWQDGVYI------TQCPIQPGENFTYRFTV 118 (563)
T ss_pred ceeEeecCCCCCCeEEEEeCCEEEEEEEeCCC-CceEEEe-ccccccCCccccCCcc------ccCCcCCCCeEEEEEEe
Confidence 458999999 579999877 899999999954 7788888 78433 2222399443 45678999999999999
Q ss_pred CCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeeccc-----
Q 008840 348 SESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTS----- 422 (551)
Q Consensus 348 ~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~----- 422 (551)
++..| +++=.+........| -.=.|+|..... +| .|++ .+..++.+.+.++-.
T Consensus 119 ~~q~G-T~~yh~h~~~~Ra~G--------~~G~liI~~~~~-----~p---~pf~-----~pd~E~~ill~dW~~~~~~~ 176 (563)
T KOG1263|consen 119 KDQIG-TLWYHSHVSWQRATG--------VFGALIINPRPG-----LP---VPFP-----KPDKEFTILLGDWYKNLNHK 176 (563)
T ss_pred CCcce-eEEEeeccccccccC--------ceeEEEEcCCcc-----CC---CCCC-----CCCceeEEEeEeeccccCHH
Confidence 87666 666665543332222 222355543221 11 1111 222334444433211
Q ss_pred -------CCC----CcceEEEcccccCC-C----CCCCcceeeeEEEEeeeeeeee-eccccCceeeeeeeeccCCccCC
Q 008840 423 -------NTG----KPTHLLINAKTLED-P----VTETPKTLDQTELVNLEEFKAC-MNKINDAIKCNLSKHACGKKQAV 485 (551)
Q Consensus 423 -------~~g----~~~~~~INg~~f~~-~----~~~~~~~~~~~~l~n~~~~~~~-~~~~~~~~~~~v~~~~~G~~~~~ 485 (551)
..+ .+-..+|||+.... + .+-.|.....|+|+|..-.... +...+|.+ .+.. .+|.-.
T Consensus 177 ~l~~~~~~~~~~p~~~D~~~iNg~~g~~~~~~~~l~v~pGktY~lRiiN~g~~~~l~F~I~~H~l--tvVe-~Dg~y~-- 251 (563)
T KOG1263|consen 177 NLKNFLDRTGALPNPSDGVLINGRSGFLYNCTPTLTVEPGKTYRLRIINAGLNTSLNFSIANHQL--TVVE-VDGAYT-- 251 (563)
T ss_pred HHHHhhccCCCCCCCCCceEECCCCCcccCceeEEEEcCCCEEEEEEEccccccceEEEECCeEE--EEEE-ecceEE--
Confidence 111 13357899998332 1 1112333677888887543222 22334422 2222 355322
Q ss_pred CCcCCCcCccEEeCCCcEEEEEEEEec
Q 008840 486 PVHEQGWKNVYKITPGYVTRILVRFSY 512 (551)
Q Consensus 486 ~~~e~~wkDTV~v~pg~~v~i~~~f~~ 512 (551)
++.--|++.+.|||+..+++..+.
T Consensus 252 ---~p~~~~~l~i~~GQ~~~vLvtadq 275 (563)
T KOG1263|consen 252 ---KPFTTDSLDIHPGQTYSVLLTADQ 275 (563)
T ss_pred ---eeeeeceEEEcCCcEEEEEEeCCC
Confidence 234579999999999999999883
|
|
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.014 Score=53.53 Aligned_cols=24 Identities=29% Similarity=0.551 Sum_probs=21.8
Q ss_pred CCc-eEEeeccccccccCcccceEE
Q 008840 526 EPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 526 ~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+| |.||||+..|...||-+.+.|
T Consensus 123 ~aGtywyhC~~pgH~~~GM~G~iiV 147 (148)
T TIGR03095 123 TAGTYWYLCTYPGHAENGMYGKIVV 147 (148)
T ss_pred CCeEEEEEcCChhHHHCCCEEEEEE
Confidence 457 999999999999999999986
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.029 Score=47.62 Aligned_cols=39 Identities=26% Similarity=0.538 Sum_probs=33.6
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+++.+.||++.++ .|. .+| |.|||- -|...||.+.+.|
T Consensus 59 ~~~~~~~pG~t~~~--tF~--------------~~G~y~y~C~--~H~~aGM~G~I~V 98 (99)
T TIGR02656 59 HKDLLNSPGESYEV--TFS--------------TPGTYTFYCE--PHRGAGMVGKITV 98 (99)
T ss_pred ccccccCCCCEEEE--EeC--------------CCEEEEEEcC--CccccCCEEEEEE
Confidence 47789999999888 676 346 999998 8999999999986
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.52 E-value=0.27 Score=44.75 Aligned_cols=49 Identities=24% Similarity=0.465 Sum_probs=43.3
Q ss_pred cCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 488 HEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 488 ~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+..-..++.|.||++.++.+.|. ++| |-+-|=|-.|-|.||-+.|+|-
T Consensus 108 me~d~~~~v~L~PG~s~elvv~ft--------------~~g~ye~~C~iPGHy~AGM~g~itV~ 157 (158)
T COG4454 108 MEHDDPNTVTLAPGKSGELVVVFT--------------GAGKYEFACNIPGHYEAGMVGEITVS 157 (158)
T ss_pred cccCCcceeEeCCCCcEEEEEEec--------------CCccEEEEecCCCcccCCcEEEEEeC
Confidence 344567899999999999999998 567 9999999999999999999873
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=92.05 E-value=0.24 Score=41.92 Aligned_cols=38 Identities=26% Similarity=0.557 Sum_probs=31.9
Q ss_pred ccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 494 NVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 494 DTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+..+.+|++..+ .|+ .+| |.|+|- . |...||-+.+.|
T Consensus 60 ~~~~~~~G~~~~~--tF~--------------~~G~y~y~C~-P-H~~~GM~G~i~V 98 (99)
T PF00127_consen 60 SSPLLAPGETYSV--TFT--------------KPGTYEYYCT-P-HYEAGMVGTIIV 98 (99)
T ss_dssp EEEEBSTTEEEEE--EEE--------------SSEEEEEEET-T-TGGTTSEEEEEE
T ss_pred cceecCCCCEEEE--EeC--------------CCeEEEEEcC-C-CcccCCEEEEEE
Confidence 5778899999888 565 346 999999 5 999999999887
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
Probab=86.20 E-value=7.5 Score=31.74 Aligned_cols=68 Identities=15% Similarity=0.180 Sum_probs=38.9
Q ss_pred EEEEEEEecCCCceEEEEEcCCceEEEEE--cCCCCCC-------CceEecEEEEccCceEEEEEEcCCCC--CceEEEe
Q 008840 290 KYRFRIINASNARFFRFFFTNGLRFIHVG--SDSAYLG-------KPVVTNDTVLAPAEIADVVIDFSEST--SDVAILA 358 (551)
Q Consensus 290 ~~RlRllNas~~~~~~l~l~~g~~~~via--~DG~~l~-------~P~~~~~l~l~pgeR~dVlv~~~~~~--g~~~~L~ 358 (551)
...|++.|.|.. ...|.+..|+.+.++- .+|..+= --.......|.|||....-...+... +++|+|.
T Consensus 3 ~~~l~v~N~s~~-~v~l~f~sgq~~D~~v~d~~g~~vwrwS~~~~FtQal~~~~l~pGe~~~~~~~~~~~~~~~G~Y~~~ 81 (82)
T PF12690_consen 3 EFTLTVTNNSDE-PVTLQFPSGQRYDFVVKDKEGKEVWRWSDGKMFTQALQEETLEPGESLTYEETWDLKDLSPGEYTLE 81 (82)
T ss_dssp EEEEEEEE-SSS--EEEEESSS--EEEEEE-TT--EEEETTTT-------EEEEE-TT-EEEEEEEESS----SEEEEEE
T ss_pred EEEEEEEeCCCC-eEEEEeCCCCEEEEEEECCCCCEEEEecCCchhhheeeEEEECCCCEEEEEEEECCCCCCCceEEEe
Confidence 467889999954 4677777777655444 4554431 01235689999999999988888765 5688875
|
It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.56 E-value=6.7 Score=35.92 Aligned_cols=99 Identities=13% Similarity=0.063 Sum_probs=65.4
Q ss_pred CCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCc
Q 008840 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTW 176 (551)
Q Consensus 97 ~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~ 176 (551)
.+++-.+.++.|++++..+.|.-.-.|.+-.+.+- ..-..-.|....+ .+++.-.+.+ .+.||++-
T Consensus 59 ~f~p~~~~v~aG~tv~~v~~n~~el~hef~~~~~~----------~~~~~~~~~~~~~-Dme~d~~~~v---~L~PG~s~ 124 (158)
T COG4454 59 SFKPSSFEVKAGETVRFVLKNEGELKHEFTMDAPD----------KNLEHVTHMILAD-DMEHDDPNTV---TLAPGKSG 124 (158)
T ss_pred ccCCCcccccCCcEEeeeecCcccceEEEeccCcc----------ccchhHHHhhhCC-ccccCCccee---EeCCCCcE
Confidence 46788899999999999999986655443322100 0111112222222 3334222223 47899998
Q ss_pred ceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 177 TNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 177 ~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+..+... .+|.|-.-|-.-| |..+||.|-|.|.
T Consensus 125 ---elvv~ft-~~g~ye~~C~iPG----Hy~AGM~g~itV~ 157 (158)
T COG4454 125 ---ELVVVFT-GAGKYEFACNIPG----HYEAGMVGEITVS 157 (158)
T ss_pred ---EEEEEec-CCccEEEEecCCC----cccCCcEEEEEeC
Confidence 8888884 8999999999877 4569999999886
|
|
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=82.84 E-value=8.5 Score=34.01 Aligned_cols=39 Identities=13% Similarity=0.076 Sum_probs=29.7
Q ss_pred ccCCCCCcceeeEEEEcCc-cCce-eEEeccCCCchhhhhhccceEEEE
Q 008840 169 FEEKGPTWTNETYHYHNMQ-QPGN-TWYHDHTMGLTRVNLLAGLIGAYI 215 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~-~~Gt-~wYH~H~~g~t~~qv~~GL~G~~i 215 (551)
.|.+||+. +..|.+.. ++|+ |-|-|-+-|. ++.|.|.+.
T Consensus 84 liggGes~---svtF~~~~l~~g~~Y~f~CSFPGH-----~~~MkG~l~ 124 (125)
T TIGR02695 84 VIGGGEKT---SVTFDVSKLSAGEDYTFFCSFPGH-----WAMMRGTVK 124 (125)
T ss_pred ccCCCceE---EEEEECCCCCCCCcceEEEcCCCc-----HHhceEEEe
Confidence 47889988 88898742 5776 9999998764 356888765
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=81.80 E-value=9.4 Score=33.55 Aligned_cols=75 Identities=9% Similarity=-0.038 Sum_probs=48.0
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
.+.|.+..|++|++++++.-- -++...-++. +.. .+.||..-
T Consensus 45 ~~~l~lp~g~~v~~~ltS~DV----------------------iHsf~ip~~~------------~k~-d~~PG~~~--- 86 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSEDV----------------------IHSFWIPELG------------IKM-DAIPGRTN--- 86 (120)
T ss_dssp SSEEEEETTSEEEEEEEESSS-----------------------EEEEETTCT------------EEE-EEBTTCEE---
T ss_pred cceecccccceEeEEEEcCCc----------------------cccccccccC------------ccc-ccccccce---
Confidence 579999999999999999522 2444433322 111 24577766
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEE
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYIL 216 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV 216 (551)
...|.++ .+|+|++.|...--.. | +-|.|-++|
T Consensus 87 ~~~~~~~-~~G~y~~~C~e~CG~g-H--~~M~~~v~V 119 (120)
T PF00116_consen 87 SVTFTPD-KPGTYYGQCAEYCGAG-H--SFMPGKVIV 119 (120)
T ss_dssp EEEEEES-SSEEEEEEE-SSSSTT-G--GG-EEEEEE
T ss_pred eeeeeec-cCCcEEEcCccccCcC-c--CCCeEEEEE
Confidence 7778885 9999999998643222 2 556666655
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 551 | ||||
| 2x87_A | 513 | Crystal Structure Of The Reconstituted Cota Length | 2e-85 | ||
| 1gsk_A | 513 | Crystal Structure Of Cota, An Endospore Coat Protei | 4e-85 | ||
| 4a67_A | 513 | Mutations In The Neighbourhood Of Cota-Laccase Trin | 7e-85 | ||
| 4akq_A | 513 | Mutations In The Neighbourhood Of Cota-Laccase Trin | 1e-84 | ||
| 2wsd_A | 513 | Proximal Mutations At The Type 1 Cu Site Of Cota-La | 1e-84 | ||
| 4a68_A | 513 | Mutations In The Neighbourhood Of Cota-Laccase Trin | 1e-84 | ||
| 4akp_A | 513 | Mutations In The Neighbourhood Of Cota-Laccase Trin | 1e-84 | ||
| 4a66_A | 513 | Mutations In The Neighbourhood Of Cota-Laccase Trin | 2e-84 | ||
| 4ako_A | 507 | Mutations In The Neighbourhood Of Cota-Laccase Trin | 3e-83 | ||
| 3gyr_A | 612 | Structure Of Phenoxazinone Synthase From Streptomyc | 1e-32 | ||
| 3abg_A | 534 | X-Ray Crystal Analysis Of Bilirubin Oxidase From My | 5e-27 | ||
| 2yxv_A | 446 | The Deletion Mutant Of Multicopper Oxidase Cueo Len | 1e-15 | ||
| 3aw5_A | 448 | Structure Of A Multicopper Oxidase From The Hyperth | 2e-15 | ||
| 2xu9_A | 439 | Crystal Structure Of Laccase From Thermus Thermophi | 1e-13 | ||
| 2uxt_A | 451 | Sufi Protein From Escherichia Coli Length = 451 | 6e-10 | ||
| 3zx1_A | 481 | Multicopper Oxidase From Campylobacter Jejuni: A Me | 9e-10 | ||
| 1pf3_A | 498 | Crystal Structure Of The M441l Mutant Of The Multic | 4e-09 | ||
| 1pf3_A | 498 | Crystal Structure Of The M441l Mutant Of The Multic | 2e-05 | ||
| 3nsf_A | 505 | Apo Form Of The Multicopper Oxidase Cueo Length = 5 | 4e-09 | ||
| 3nsf_A | 505 | Apo Form Of The Multicopper Oxidase Cueo Length = 5 | 2e-05 | ||
| 3nsc_A | 505 | C500s Mutant Of Cueo Bound To Cu(Ii) Length = 505 | 5e-09 | ||
| 3nsc_A | 505 | C500s Mutant Of Cueo Bound To Cu(Ii) Length = 505 | 3e-04 | ||
| 3qqx_A | 505 | Reduced Native Intermediate Of The Multicopper Oxid | 5e-09 | ||
| 3qqx_A | 505 | Reduced Native Intermediate Of The Multicopper Oxid | 4e-05 | ||
| 1kv7_A | 488 | Crystal Structure Of Cueo, A Multi-Copper Oxidase F | 5e-09 | ||
| 1kv7_A | 488 | Crystal Structure Of Cueo, A Multi-Copper Oxidase F | 2e-05 | ||
| 3nsy_A | 511 | The Multi-Copper Oxidase Cueo With Six Met To Ser M | 5e-09 | ||
| 3nsy_A | 511 | The Multi-Copper Oxidase Cueo With Six Met To Ser M | 1e-05 | ||
| 3uaa_A | 489 | Multicopper Oxidase Cueo Mutant C500se506q (Data1) | 6e-09 | ||
| 3uaa_A | 489 | Multicopper Oxidase Cueo Mutant C500se506q (Data1) | 7e-04 |
| >pdb|2X87|A Chain A, Crystal Structure Of The Reconstituted Cota Length = 513 | Back alignment and structure |
|
| >pdb|1GSK|A Chain A, Crystal Structure Of Cota, An Endospore Coat Protein From Bacillus Subtilis Length = 513 | Back alignment and structure |
|
| >pdb|4A67|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear Site: D116e Mutant Length = 513 | Back alignment and structure |
|
| >pdb|4AKQ|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear Site: E498d Mutant Length = 513 | Back alignment and structure |
|
| >pdb|2WSD|A Chain A, Proximal Mutations At The Type 1 Cu Site Of Cota-Laccase: I494a Mutant Length = 513 | Back alignment and structure |
|
| >pdb|4A68|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear Site: D116n Mutant Length = 513 | Back alignment and structure |
|
| >pdb|4AKP|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear Site:e498t Mutant Length = 513 | Back alignment and structure |
|
| >pdb|4A66|A Chain A, Mutations In The Neighbourhood Of Cota-Laccase Trinuclear Site: D116a Mutant Length = 513 | Back alignment and structure |
|
| >pdb|3GYR|A Chain A, Structure Of Phenoxazinone Synthase From Streptomyces Antibioticus Reveals A New Type 2 Copper Center. Length = 612 | Back alignment and structure |
|
| >pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From Myrothecium Verrucaria At 2.3 Angstrom Resolution Using A Twin Crystal Length = 534 | Back alignment and structure |
|
| >pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo Length = 446 | Back alignment and structure |
|
| >pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The Hyperthermophilic Archaeon Pyrobaculum Aerophilum Length = 448 | Back alignment and structure |
|
| >pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 | Back alignment and structure |
|
| >pdb|2UXT|A Chain A, Sufi Protein From Escherichia Coli Length = 451 | Back alignment and structure |
|
| >pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 | Back alignment and structure |
|
| >pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper Oxidase Cueo Length = 498 | Back alignment and structure |
|
| >pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper Oxidase Cueo Length = 498 | Back alignment and structure |
|
| >pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo Length = 505 | Back alignment and structure |
|
| >pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo Length = 505 | Back alignment and structure |
|
| >pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii) Length = 505 | Back alignment and structure |
|
| >pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii) Length = 505 | Back alignment and structure |
|
| >pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase Cueo Length = 505 | Back alignment and structure |
|
| >pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase Cueo Length = 505 | Back alignment and structure |
|
| >pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E. Coli Involved In Copper Homeostasis Length = 488 | Back alignment and structure |
|
| >pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E. Coli Involved In Copper Homeostasis Length = 488 | Back alignment and structure |
|
| >pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser Mutations (M358s, M361s,M362s,M364s,M366s,M368s) Length = 511 | Back alignment and structure |
|
| >pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser Mutations (M358s, M361s,M362s,M364s,M366s,M368s) Length = 511 | Back alignment and structure |
|
| >pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1) Length = 489 | Back alignment and structure |
|
| >pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1) Length = 489 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 551 | |||
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 1e-124 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 7e-94 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 9e-93 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 2e-86 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 2e-78 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 3e-77 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 4e-71 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 3e-67 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 1e-16 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 7e-15 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 9e-15 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 2e-12 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-09 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 5e-05 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 4e-11 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 4e-10 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 5e-10 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 1e-09 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 1e-08 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 1e-08 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 1e-08 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 1e-08 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 3e-05 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 2e-08 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 2e-08 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 2e-08 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 2e-07 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 2e-07 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 3e-06 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 3e-06 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 9e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 |
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 373 bits (958), Expect = e-124
Identities = 194/533 (36%), Positives = 264/533 (49%), Gaps = 46/533 (8%)
Query: 36 LKLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLT 95
+ LE FVD LP +K + E+ M E + HRDLPPT ++ +
Sbjct: 1 MTLEKFVDALPIPDTLKPVQQSKEK---TYYEVTMEECTHQLHRDLPPTRLWGYN----- 52
Query: 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKG-VPTVVHLHGGIDE 154
PGPTIE + YV W N+LP H LPID TI + +++ V TVVHLHGG+
Sbjct: 53 GLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP 112
Query: 155 PESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAY 214
+SDGY ++WF+ FE+ GP + E YHY N Q+ WYHDH M LTR+N+ AGL+GAY
Sbjct: 113 DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAY 172
Query: 215 ILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSI---HPQWQPEYFG 271
I+ P E L+LPS + +D PL + DR +GS++ S NPS +P P + G
Sbjct: 173 IIHDPK-EKRLKLPSDE-YDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCG 230
Query: 272 DVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTN 331
+ I+VNGK WP + V RKYRFR+INASN R + NG FI +GSD L + V N
Sbjct: 231 ETILVNGKVWPYLEVEPRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLN 290
Query: 332 DTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKF-IILKNRETD 390
LAPAE D++IDF+ + ILAN A G+ + + +M+F + + D
Sbjct: 291 SFSLAPAERYDIIIDFTAYEGESIILANSAG---CGGDVNPETDANIMQFRVTKPLAQKD 347
Query: 391 PWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPVTETPK--TL 448
R P+ L YPS R + + G+P L+N K DPVTETPK T
Sbjct: 348 ESRKPKYLASYPSVQHERIQNIRTLKLAGTQDEYGRPVL-LLNNKRWHDPVTETPKVGTT 406
Query: 449 DQTELVNLEEFKACM-------------NKINDAIKCNLSKHACGKKQAVPVHEQGWKNV 495
+ ++N + + + G P E+GWK+
Sbjct: 407 EIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDT 466
Query: 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLK 548
+ G V RI F Y YV+HCH L+HED MMRP+
Sbjct: 467 IQAHAGEVLRIAATF------GPYSGR------YVWHCHALEHEDYDMMRPMD 507
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 | Back alignment and structure |
|---|
Score = 296 bits (758), Expect = 7e-94
Identities = 129/535 (24%), Positives = 203/535 (37%), Gaps = 83/535 (15%)
Query: 32 LINPLKLEMFVDELPDMPKIKGYYAANGVVKPKKL---EIGMFEKKWKFHRDLPPTPVFA 88
I+P + MF LP P + V +++ E+ + + + DL +
Sbjct: 3 QISP-QYPMFTVPLPIPPVKQPRLTVTNPVNGQEIWYYEVEIKPFTHQVYPDLGSADLVG 61
Query: 89 FGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHL 148
+ PGPT + G++T V + N+ P VHL
Sbjct: 62 YD-----GMSPGPTFQVPRGVETVVRFINNAE---------------------APNSVHL 95
Query: 149 HGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLA 208
HG DG+A+ G Y+Y N Q WYHDH M +T N
Sbjct: 96 HGSFSRAAFDGWAEDITEPG-----SFKD---YYYPNRQSARTLWYHDHAMHITAENAYR 147
Query: 209 GLIGAYILRHPDVEAPLRLPSG-DVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQP 267
G G Y+L P E L LPSG FD P+ + + + NG++
Sbjct: 148 GQAGLYMLTDPA-EDALNLPSGYGEFDIPMILTSKQYTANGNLVT---------TNGELN 197
Query: 268 EYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNG------LRFIHVGSDS 321
++GDVI VNG+ WP V RKYRFR ++A+ +R F +F + L F + SDS
Sbjct: 198 SFWGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDS 257
Query: 322 AYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVN-DANGKVMK 380
L P T+ ++ AE +VV DFS+ L N G + D KVM+
Sbjct: 258 GLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMR 317
Query: 381 FIILKNR-ETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKT--- 436
F++ + + D VP L + P + + ++ IN
Sbjct: 318 FVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFG-------RTGPTWTINGVAFAD 370
Query: 437 LEDPVTETPKTLDQTE---LVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWK 493
+++ + + E L+N I+ +S+ + + V +E G K
Sbjct: 371 VQNRLLANVP-VGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLK 429
Query: 494 NVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLK 548
+V + + + A +P Y++HCH L HED+ MM
Sbjct: 430 DVVWLGRRETVVVEAHY------APFPGV------YMFHCHNLIHEDHDMMAAFN 472
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 | Back alignment and structure |
|---|
Score = 274 bits (701), Expect = 2e-86
Identities = 103/486 (21%), Positives = 167/486 (34%), Gaps = 75/486 (15%)
Query: 81 LPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKK 140
T + A + + V PTI G +T +N L
Sbjct: 18 KEATYIEATASGYMAEGVLNPTIILRRGQRVDMTLKNKLT-------------------- 57
Query: 141 GVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMG 200
PT+VH HG +D + T G ++ Y + + + G YH H G
Sbjct: 58 -EPTIVHWHGFDVNWHNDAHPSFAITPG-----ESYN---YSFDVVNRAGTYLYHPHPHG 108
Query: 201 LTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPS 260
LT G +G I+ + L G V D PL + DR F+ +Y +
Sbjct: 109 LTAKQFYMGQLGLVIVEDS--GSDLGFKYG-VNDLPLVISDRRFIGGAPVYNPT------ 159
Query: 261 IHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTN----GLRFIH 316
+ + G+ ++VNG + YR R++N SNAR + +
Sbjct: 160 -PMEMIAGFLGNAVLVNGVKDAVFKLSGGSYRLRLVNGSNARLYMLSIVKKNGDVVPMRL 218
Query: 317 VGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANG 376
+ D +L +P+ LAPAE A+VV++ E + D P G+ + +A
Sbjct: 219 IAVDQGFLARPIEVRALFLAPAERAEVVVELGEGVYLLKNTPFD-PMHLEMGHGMQEALP 277
Query: 377 KVMKFIILK-NRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAK 435
+ ++ I E VP + + P + + TR A+ + IN
Sbjct: 278 EGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFAL------SLSGMQWTINGM 331
Query: 436 TL--EDPVTETPKTLDQTELVNLEEFKACMNK-----------INDAIKCNLSKHACGKK 482
+P+ E ++ EL + KA M I
Sbjct: 332 FWNASNPLFEHVS-VEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDN 390
Query: 483 QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNI 542
+ + G K+ I PG +I+V F + +HCH L+HED
Sbjct: 391 RGRLPTDLGLKDTVLIWPGETVKIVVNF--DAKK--------RGQLFPFHCHNLEHEDGG 440
Query: 543 MMRPLK 548
MM +
Sbjct: 441 MMINIA 446
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 252 bits (646), Expect = 2e-78
Identities = 80/491 (16%), Positives = 141/491 (28%), Gaps = 73/491 (14%)
Query: 62 KPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPP 121
+ + L + + W F V+ GPTI G D + + N L
Sbjct: 17 RGQPLFMTVQRAHWSFT-PGTRASVWGIN-----GRYLGPTIRVWKGDDVKLIYSNRLT- 69
Query: 122 NHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETY 181
+ + G G + W
Sbjct: 70 --------------------ENVSMTVAGLQVPGPLMGGPARMMSPNA-----DWA---P 101
Query: 182 HYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSG-DVFDRPLFVF 240
Q WYH +T T + GL G +++ +V L +P+ V D P+ +
Sbjct: 102 VLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLV-EDEVSKSLPIPNHYGVDDFPVIIQ 160
Query: 241 DRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASN 300
D+ G+ + + GD ++VNG P + V R R R++NASN
Sbjct: 161 DKRLDNFGTPEY---------NEPGSGGFVGDTLLVNGVQSPYVEVSRGWVRLRLLNASN 211
Query: 301 ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360
+R ++ +G + D +L PV LAP E ++++D S
Sbjct: 212 SRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEA 271
Query: 361 APYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEY 420
A ++ V ++ +P P L
Sbjct: 272 ASIVDRIRGFFEPSSILVSTLVL---TLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRD 328
Query: 421 TSNTGKPTHLLINAKTLE-DPVTETPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHAC 479
S P IN + + + + T + E + A
Sbjct: 329 ISLGDDPG---INGQLWDVNRIDVTAQ-QGTWERWTVR------ADEPQAFHIEGVMFQI 378
Query: 480 GKK--QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILD 537
++GWK+ + +LV F + A + ++ L+
Sbjct: 379 RNVNGAMPFPEDRGWKDTVWVDGQ--VELLVYF---------GQPSWAHFPFYFNSQTLE 427
Query: 538 HEDNIMMRPLK 548
D + L
Sbjct: 428 MADRGSIGQLL 438
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 | Back alignment and structure |
|---|
Score = 251 bits (641), Expect = 3e-77
Identities = 95/530 (17%), Positives = 170/530 (32%), Gaps = 105/530 (19%)
Query: 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNH 123
++++ + + F + + ++ GP ++ G V N L
Sbjct: 18 NRIQLTIGAGQSTFGG--KTATTWGYN-----GNLLGPAVKLQRGKAVTVDIYNQLT--- 67
Query: 124 ILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHY 183
T +H HG E DG + G +
Sbjct: 68 ------------------EETTLHWHGLEVPGEVDGGPQGIIPPGG-----KRS---VTL 101
Query: 184 HNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSG-DVFDRPLFVFDR 242
+ Q W+H H G T + GL G ++ D L LP + D P+ V D+
Sbjct: 102 NVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIE-DDEILKLMLPKQWGIDDVPVIVQDK 160
Query: 243 NFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNAR 302
F +G I +FGD ++ NG +P+ R R R++N NAR
Sbjct: 161 KFSADGQIDYQLD------VMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNAR 214
Query: 303 FFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSEST----------- 351
F ++ + SD L +PV ++ + E +V+++ +++
Sbjct: 215 SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQ 274
Query: 352 SDVAILANDAPYPYPAGNPV-------------------NDANGKVMKFIILKNRETDPW 392
+AI D P+P P+ + V K + + D
Sbjct: 275 MGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMM 334
Query: 393 RVPEKLIEYPSADLSAASTTRYIAMYEYTSNTG--------KPTHLLINAKTLEDPVTET 444
+ + +Y ++ ++ + + + IN + +
Sbjct: 335 GMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKPMF 394
Query: 445 PKTLDQTELVNLEEFKACMNKINDAIKCNLSKHAC------GKKQAVPVHEQGWKNVYKI 498
Q E + + D + H + H GWK+ K+
Sbjct: 395 AAAKGQYERWVISG-------VGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKV 447
Query: 499 TPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLK 548
G V+ +LV+F DA E Y+ HCH+L+HED MM
Sbjct: 448 -EGNVSEVLVKF---------NHDAPKEHAYMAHCHLLEHEDTGMMLGFT 487
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 234 bits (599), Expect = 4e-71
Identities = 99/525 (18%), Positives = 174/525 (33%), Gaps = 94/525 (17%)
Query: 41 FVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPG 100
+ L +P +K + + + E + + T + + VP
Sbjct: 31 QGEILKALPLLKNESKEKNI---FHATLEIKENHIELIKG-KKTLFYTYN-----GLVPA 81
Query: 101 PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGY 160
P IE G + +N L T +H HG P+ DG
Sbjct: 82 PKIEVFEGDKLEILVKNKLK---------------------EATTIHWHGVPVPPDQDGS 120
Query: 161 AKSWFTAGFEEKGPTWTNETYHYHNMQQPGNT-WYHDHTMGLTRVNLLAGLIGAYILRHP 219
AG Y + Q T WYH H + GL GA+++
Sbjct: 121 PHDPILAG-----EERI---YRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVI-KA 171
Query: 220 DVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGK 279
+A L ++ L + D N I N+ W G+ +++NG+
Sbjct: 172 KKDALSHLK-----EKDLMISDLRLDENAQIPNNN-------LNDWLNGREGEFVLINGQ 219
Query: 280 AWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAE 339
P++ + R RI NA+ AR+ G +FI VG+D + K + + L+PA
Sbjct: 220 FKPKIKLATN-ERIRIYNATAARYLNLRIQ-GAKFILVGTDGGLIEKTIYKEELFLSPAS 277
Query: 340 IADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLI 399
+V+ID + + A Y + + F+ N + + +P+ L
Sbjct: 278 RVEVLIDAPKDGNFKLESA------YYDRDKMMVKEEPNTLFLANINLKKENVELPKNLK 331
Query: 400 EYPSADLSAASTTRYI-----------AMYEYTSNTGKPTHLLINAKTLE-DPVTETPKT 447
+ ++ + E + LIN K+ + + + K
Sbjct: 332 IFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLKRIDLSSK- 390
Query: 448 LDQTE---LVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVT 504
L E ++N I+ +S GK + ++ + P
Sbjct: 391 LGVVEDWIVINKSHMDHPF-HIHGTQFELISSKLNGK--VQKAEFRALRDTINVRPNEEL 447
Query: 505 RILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLK 548
R+ ++ + G +YHCHIL+HED MM L+
Sbjct: 448 RLRMKQDF--------------KGLRMYHCHILEHEDLGMMGNLE 478
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 3e-67
Identities = 99/502 (19%), Positives = 166/502 (33%), Gaps = 92/502 (18%)
Query: 62 KPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPP 121
+ L + + + +G S PGPT+ +T +N LP
Sbjct: 13 QGGLLSLKLSATPTPLAIAGQRATLLTYG-----GSFPGPTLRVRPRDTVRLTLENRLP- 66
Query: 122 NHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETY 181
PT +H HG P+ D G +WT Y
Sbjct: 67 --------------------EPTNLHWHGLPISPKVDDPFLEI------PPGESWT---Y 97
Query: 182 HYHNMQQPGNT-WYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVF 240
+ ++ T WYH H G L AGL+GA ++ + + L +
Sbjct: 98 EFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVE--SSLDAIPELREA-EEHLLVLK 154
Query: 241 DRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASN 300
D W GD+++VNG P + ++ R R++NASN
Sbjct: 155 DLALQGGRPAPHT--------PMDWMNGKEGDLVLVNGALRPTLVAQKATLRLRLLNASN 206
Query: 301 ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES-TSDVAILAN 359
AR++R + +D +L +P+ ++ +LAP E A+V++ + + L
Sbjct: 207 ARYYRLALQ-DHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRKEGRFLLQALPY 265
Query: 360 D------APYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTR 413
D A + ++ + P +P+ L +P L A TR
Sbjct: 266 DRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPFP--TLPAPVVTR 323
Query: 414 YIAMYEYTSNTGKPTHLLINAKTLEDPVTETPKTLDQTELVNLEEFKACMNKINDAIKCN 473
+ + + IN + + + E+ + N +
Sbjct: 324 RLVL----TEDMMAARFFINGQVFDHRRVDLKGQAQTVEVWEV---------ENQG-DMD 369
Query: 474 LSKHACGKKQAV------PVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEP 527
H V P + WK+V + G V R+LV
Sbjct: 370 HPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE--------------K 415
Query: 528 G-YVYHCHILDHEDNIMMRPLK 548
G V+HCHI++HED MM L+
Sbjct: 416 GRTVFHCHIVEHEDRGMMGVLE 437
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 1e-16
Identities = 50/257 (19%), Positives = 85/257 (33%), Gaps = 52/257 (20%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHG--GIDE 154
VP P I + G D V N +P +H HG
Sbjct: 30 QVPAPLIHVMEGDDVTVNVTNMTT---------------------LPHTIHWHGMLQRGT 68
Query: 155 PESDGYAKSWFTAGFEEKGPTWTNETYHYH-NMQQPGNTWYHDHTMGLTRVNLLAGLIGA 213
+SDG + +T+ Y + G WYH H V + G+ G
Sbjct: 69 WQSDG------VPHATQH-AIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTM-RGMWGP 120
Query: 214 YILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDV 273
I VE LP + + +++++ + G + D
Sbjct: 121 LI-----VEPKNPLPIEKTVTKDYILMLSDWVSSWANKPGEGGIPGDV---------FDY 166
Query: 274 IVVNGKAWP---RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVV 329
+N K++P + V++ R R+I A + T+G D L KP+
Sbjct: 167 YTINAKSFPETQPIRVKKGDVIRLRLIGAGDHVHA--IHTHGHISQIAFKDGFPLDKPIK 224
Query: 330 TNDTVLAPAEIADVVID 346
+ ++ P E DV+++
Sbjct: 225 GDTVLIGPGERYDVILN 241
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 7e-15
Identities = 40/259 (15%), Positives = 72/259 (27%), Gaps = 64/259 (24%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
+PGPT+ A G + + N P +H HG +
Sbjct: 62 RIPGPTLWAREGDALRIHFTNAGA---------------------HPHTIHFHG-VHRAT 99
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYH-NMQQPGNTWYHDHTMGLTRVNLLAGLIGAYI 215
DG G +++ Y + G YH H L ++ GL G +I
Sbjct: 100 MDG-------TPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPL-APHIAKGLYGGFI 151
Query: 216 LRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIV 275
+ + D + V N + E++
Sbjct: 152 VEPKE-------GRPPADDEMVMVM----------------NGYNTDGGDDNEFY----S 184
Query: 276 VNGKAWP----RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVT 330
VNG + + V++ R +IN F +G F + + + T
Sbjct: 185 VNGLPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLT-PSEYT 243
Query: 331 NDTVLAPAEIADVVIDFSE 349
+ + + + F
Sbjct: 244 DTISQVQGQRGILELRFPY 262
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 9e-15
Identities = 48/260 (18%), Positives = 85/260 (32%), Gaps = 56/260 (21%)
Query: 97 SVPGPTIEALHGIDT-YVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP 155
VPGP I G D V N+ +P +H HG + +
Sbjct: 31 QVPGPLIHVQEG-DDVIVNVTNNTS---------------------LPHTIHWHG-VHQK 67
Query: 156 ES---DGYAKSWFTAGFEEKGPTWTNETYHYH-NMQQPGNTWYHDHTMGLTRVNLLAGLI 211
+ DG G ++ P ++Y Y + G WYH H + G+
Sbjct: 68 GTWRSDG------VPGVTQQ-PIEAGDSYTYKFKADRIGTLWYHCHVNVN-EHVGVRGMW 119
Query: 212 GAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFG 271
G I V+ LP + + + + + + G ++
Sbjct: 120 GPLI-----VDPKQPLPIEKRVTKDVIMMMSTWESAVADKYGEGGTPMNV---------A 165
Query: 272 DVIVVNGKAWP---RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKP 327
D VN K++P + V++ + R A ++G + D L P
Sbjct: 166 DYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGGIHA--MHSHGHDMLVTHKDGLPLDSP 223
Query: 328 VVTNDTVLAPAEIADVVIDF 347
+ +++P E DV+I+
Sbjct: 224 YYADTVLVSPGERYDVIIEA 243
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 69.2 bits (168), Expect = 2e-12
Identities = 47/276 (17%), Positives = 71/276 (25%), Gaps = 57/276 (20%)
Query: 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP 155
GP I+A G YV +N P H HG
Sbjct: 90 LGFLGPIIKAETGDKVYVHLKNLAS---------------------RPYTFHSHGITYYK 128
Query: 156 ESDGYAKSWFTAGFEEKG-PTWTNETYHY-----------HNMQQPGNTWYHDHTMGLTR 203
E +G T F+ + E Y Y YH H
Sbjct: 129 EHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKD 188
Query: 204 VNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHP 263
+ +GLIG I+ D L DR V N S Y+ P
Sbjct: 189 IA--SGLIGPLIICKKD---SLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEP 243
Query: 264 QWQP------EYFGDVIVVNGKA---WPRMTVRRR-KYRFRIINASNARFFRFFFTNGLR 313
+ + + VNG +++ + ++ + N F +G
Sbjct: 244 EKVDKDNEDFQQSNRMYSVNGYTFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQA 303
Query: 314 FIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSE 349
+ K + L PA + D +
Sbjct: 304 LTN---------KNYRIDTINLFPATLFDAYMVAQN 330
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 60.0 bits (144), Expect = 1e-09
Identities = 35/259 (13%), Positives = 71/259 (27%), Gaps = 44/259 (16%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
+ GP + A G + ++N P +H HG +
Sbjct: 806 GILGPQLHADVGDKVKIIFKNMAT---------------------RPYSIHAHG-VQTES 843
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQP--GNTWYHDHTMGLTRVNLLAGLIGAY 214
S T E W + Y+ + + +GLIG
Sbjct: 844 STVTP----TLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLY--SGLIGPL 897
Query: 215 ILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYF--GD 272
I+ F VFD N + + ++P + E+
Sbjct: 898 IVCRRPYLKVFNPRRKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNK 957
Query: 273 VIVVNGKAWPRM---TVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPV 328
+ +NG+ + + T+ + + ++ N +G F + V
Sbjct: 958 MHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG-------V 1010
Query: 329 VTNDTV-LAPAEIADVVID 346
++D + P + +
Sbjct: 1011 YSSDVFDIFPGTYQTLEMF 1029
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 5e-05
Identities = 44/306 (14%), Positives = 74/306 (24%), Gaps = 54/306 (17%)
Query: 39 EMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPT--PVFAFGTSSLTA 96
+ L + G IG KK + + G
Sbjct: 392 IFTKENLTAPGSDSAVFFEQG-----TTRIGGSYKKLVYREYTDASFTNRKERGPEEEHL 446
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
+ GP I A G VT+ N P + G
Sbjct: 447 GILGPVIWAEVGDTIRVTFHNKGA---------------------YPLSIEPIGVRFNKN 485
Query: 157 SDGYAKSWFTAGFEEKGPTWT-------NETYHYHNMQQPGNT---------WYHDHTMG 200
++G S P TY + ++ G T Y+
Sbjct: 486 NEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDP 545
Query: 201 LTRVNLLAGLIGAYILRHPDVEAPLRLPSG--DVFDRPLFVFDRN--FLTNGSIYMNSTG 256
+ GLIG + F VFD N L +I M +T
Sbjct: 546 TKDIF--TGLIGPMKICKKGSLHANGRQKDVDKEFYLFPTVFDENESLLLEDNIRMFTTA 603
Query: 257 NNPSIHPQWQPEYFGDVIVVNGKAWPRMTV----RRRKYRFRIINASNARFFRFFFTNGL 312
+ + + +NG + + + + +A N + +G
Sbjct: 604 PDQVDKEDEDFQESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGN 663
Query: 313 RFIHVG 318
++ G
Sbjct: 664 TYLWRG 669
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 4e-11
Identities = 61/292 (20%), Positives = 91/292 (31%), Gaps = 63/292 (21%)
Query: 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG--IDEPE 156
PGP I A G + + N+L N T +H HG + E
Sbjct: 96 PGPAIIADWGDNLIIHVTNNLEHN--------------------GTSIHWHGIRQLGSLE 135
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYH-NMQQPGNTWYHDHTMGLTRVNLLAGLIGAYI 215
DG G + P +T Y + Q G TWYH H L + GL G I
Sbjct: 136 YDG------VPGVTQ-CPIAPGDTLTYKFQVTQYGTTWYHSHF-SLQYGD---GLFGPLI 184
Query: 216 LRHP-----DVEAPLRLPSGDVFDRPLFVFDRNFLTNG-----SIYMNSTGNNPSIHPQW 265
+ P D + + + D +F + MN T
Sbjct: 185 INGPATADYDEDVGV-IFLQDWAHESVFEIWDTARLGAPPALENTLMNGTNTFDC----- 238
Query: 266 QPEYFGDVIVVNGKAWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIH----VGSD 320
D V G +T KYR R+IN F F N H + +D
Sbjct: 239 --SASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDN-----HTLTVIAND 291
Query: 321 SAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVN 372
+ P T+ ++ + DV+++ + + + I N N
Sbjct: 292 LVPI-VPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAAN 342
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 61/391 (15%), Positives = 115/391 (29%), Gaps = 97/391 (24%)
Query: 99 PGPTIEALHGIDT-YVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG--IDEP 155
P I D + + L ++ T +H HG
Sbjct: 53 IAPLITGNID-DRFQINVIDQLTDANMR----------------RATSIHWHGFFQAGTT 95
Query: 156 ESDGYAKSWFTAGFEE----KGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLI 211
E DG A + ++ Y + Q G WYH H + GL
Sbjct: 96 EMDG------PAFVNQCPIIPNESFV---YDFVVPGQAGTYWYHSHL-STQYCD---GLR 142
Query: 212 GAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFG 271
GA+++ P+ D + + D + ++ N P+
Sbjct: 143 GAFVVYDPNDPHLSLYDV-DDASTVITIADWYHSLSTVLFPNPNKAPPA----------P 191
Query: 272 DVIVVNGK----------AWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIH---- 316
D ++NG ++V+ ++YRFRI++ S + F H
Sbjct: 192 DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDG-----HRMTV 246
Query: 317 VGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANG 376
+ D +P+ + + + VV++ +++ + I AN + +N A
Sbjct: 247 IEVDGVSH-QPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSA-- 303
Query: 377 KVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKT 436
+ Y A ++ +T++ +N LIN
Sbjct: 304 ---------------------IFRYQGAAVAEPTTSQNSGTALNEAN----LIPLINPGA 338
Query: 437 LEDPVTETP-KTLDQTELVNLEEFKACMNKI 466
+PV L+ N +N
Sbjct: 339 PGNPVPGGADINLNLRIGRNATTADFTINGA 369
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 37/208 (17%), Positives = 66/208 (31%), Gaps = 41/208 (19%)
Query: 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP------DVEAPLRLPSGDVF 233
Y++ G WYH HT + + GL I++ D E L L + +
Sbjct: 90 LYNFTVDYNVGTYWYHSHT-DGQYEDGMKGLF---IIKDDSFPYDYDEELSLSL--SEWY 143
Query: 234 DRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRR-RKYR 292
+ ++F++ N TG P ++VN V+ Y
Sbjct: 144 HDLVTDLTKSFMSVY----NPTGAEP----------IPQNLIVNNTMNLTWEVQPDTTYL 189
Query: 293 FRIINASNARFFRFFFTNGLRFIH----VGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348
RI+N F+ + H V D + VT+ + A+ V++
Sbjct: 190 LRIVNVGGFVSQYFWIED-----HEMTVVEIDGITT-EKNVTDMLYITVAQRYTVLVHTK 243
Query: 349 ESTSD----VAILANDAPYPYPAGNPVN 372
T + + P+ +N
Sbjct: 244 NDTDKNFAIMQKFDDTMLDVIPSDLQLN 271
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 59.8 bits (144), Expect = 1e-09
Identities = 41/264 (15%), Positives = 75/264 (28%), Gaps = 50/264 (18%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
+ GP I A V ++N P +H HG E
Sbjct: 65 GILGPVIRAEVDDVIQVRFKNLAS---------------------RPYSLHAHGLSYEKS 103
Query: 157 SDGYAKSWFTAGFEEKGPT-WTNETYHY----HNMQQPGNT-------WYHDHTMGLTRV 204
S+G + + ++ N+TY Y P N Y+ +
Sbjct: 104 SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDI 163
Query: 205 NLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYM--NSTGNNPSIH 262
+ GLIG ++ D R + F S Y T +
Sbjct: 164 HS--GLIGPLLICRKGTLDKETNMPVD--MREFVLLFMVFDEKKSWYYDKKPTRSWRRAS 219
Query: 263 PQWQPEYFGDVIVVNGKAW--PRMTVRRR-KYRFRIINASNARFFRFFFTNGLRFIHVGS 319
+ + + + +NG + P + + + R ++N +R +G + G+
Sbjct: 220 SEVKNSH--EFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGT 277
Query: 320 DSAYLGKPVVTNDTVLAPAEIADV 343
+ V L P +
Sbjct: 278 QQ---HQLGVWP---LLPGSFKTL 295
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 54/291 (18%), Positives = 94/291 (32%), Gaps = 60/291 (20%)
Query: 99 PGPTIEALHGIDT-YVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG--IDEP 155
PGP + G D + ++L + +L T +H HG
Sbjct: 32 PGPLVAGNIG-DRFQLNVIDNLTNHTML----------------KSTSIHWHGFFQHGTN 74
Query: 156 ESDGYAKSWFTAGFEEKGPTWTNETYHY--HNMQQPGNTWYHDHTMGLTRVNLLAGLIGA 213
+DG A + P ++ Y Q G WYH H + GL G
Sbjct: 75 WADG------PAFINQ-CPISPGHSFLYDFQVPDQAGTFWYHSHLSTQ-YCD---GLRGP 123
Query: 214 YILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDV 273
+++ P+ P +D D +T Y + P
Sbjct: 124 FVVYDPN------DPHASRYDVDN---DDTVITLADWYHTAAKLGPRFPGGADA------ 168
Query: 274 IVVNGK---------AWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAY 323
++NGK + V + ++YRFR+++ S F I + DS
Sbjct: 169 TLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVN 227
Query: 324 LGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDA 374
+P+ + + A+ V+D +++ + I AN +N A
Sbjct: 228 S-QPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSA 277
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 1e-08
Identities = 42/262 (16%), Positives = 66/262 (25%), Gaps = 56/262 (21%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
+VPG I G + NH P + LH
Sbjct: 56 TVPGSFIRVREGDEIEFNLSNHPSSKM-------------------PHNIDLHAVTGPGG 96
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYH-NMQQPGNTWYHDHTMGLTRVNLLAGLIGAYI 215
+ T T ++ PG YH T + +++ G+ G +
Sbjct: 97 GAESS------------FTAPGHTSTFNFKALNPGLYIYHCATAPVG-MHIANGMYGLIL 143
Query: 216 LRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYM-NSTGNNPSIHPQWQPEYFGDVI 274
+ + AP DR ++ +F T G + + +Y
Sbjct: 144 VEPKEGLAP--------VDREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYV---- 191
Query: 275 VVNGKAWPR-----MTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPV 328
V NG +T + R I N F G F V + L
Sbjct: 192 VFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVI-GEIFDTVYVEGGSL--KN 248
Query: 329 VTNDTV-LAPAEIADVVIDFSE 349
T + A V
Sbjct: 249 HNVQTTLIPAGGAAIVEFKVEV 270
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 59/280 (21%), Positives = 92/280 (32%), Gaps = 78/280 (27%)
Query: 99 PGPTIEALHGIDT-YVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDE--- 154
PGPTI A G D+ V N L V+H HG I +
Sbjct: 32 PGPTIRANAG-DSVVVELTNKLHTE--------------------GVVIHWHG-ILQRGT 69
Query: 155 PESDGYAKSWFTAGFEEKGPTWTN------ETYHYH-NMQQPGNTWYHDHTMGLTRVNLL 207
P +DG TA + ET+ Y+ + PG +YH H G+ R
Sbjct: 70 PWADG------TASI-------SQCAINPGETFFYNFTVDNPGTFFYHGHL-GMQRS--- 112
Query: 208 AGLIGAYILRHPDVEAPLRLPSGDV-------FDRPLFVFDRNFLTNG--------SIYM 252
AGL G+ I+ P + G++ + + + + + +I +
Sbjct: 113 AGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILL 172
Query: 253 NSTG--NNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRR-RKYRFRIINASNARFFRFFFT 309
N G + + A V + YR RI + + F
Sbjct: 173 NGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIG 232
Query: 310 NGLRFIH----VGSDSAYLGKPVVTNDTVLAPAEIADVVI 345
N H V +D Y+ +P T+D + E V+I
Sbjct: 233 N-----HQLLVVEADGNYV-QPFYTSDIDIYSGESYSVLI 266
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 56.6 bits (135), Expect = 1e-08
Identities = 38/265 (14%), Positives = 74/265 (27%), Gaps = 46/265 (17%)
Query: 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPES 157
+ GPTI+A +T +N P +H G S
Sbjct: 72 LLGPTIQAEVYDTVVITLKNMAS---------------------HPVSLHAVGVSYWKAS 110
Query: 158 DGYAKSWFTAGFEEKGP-TWTNETYHY----HNMQQPGNT-------WYHDHTMGLTRVN 205
+G T+ E++ + ++ Y P + Y H + +N
Sbjct: 111 EGAEYDDQTSQREKEDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLN 170
Query: 206 LLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQW 265
+GLIGA ++ A + + F VFD + + + + +
Sbjct: 171 --SGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARA 228
Query: 266 QPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLG 325
P+ VN + R+ + +I F G F+
Sbjct: 229 WPKMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQ---- 284
Query: 326 KPVVTNDTV-LAPAEIADVVIDFSE 349
++ ++P +
Sbjct: 285 ------ASLEISPITFLTAQTLLMD 303
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 45.8 bits (107), Expect = 3e-05
Identities = 40/275 (14%), Positives = 74/275 (26%), Gaps = 57/275 (20%)
Query: 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP 155
+ + GP + G + ++N P ++ HG D
Sbjct: 447 SGILGPLLYGEVGDTLLIIFKNQAS---------------------RPYNIYPHGITDVR 485
Query: 156 ESDGYAKSWFTAGFEEKG--PTWTNETYHY-----------HNMQQPGNTWYHDHTMGLT 202
G + P E + Y + + +Y
Sbjct: 486 PLYS---RRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMER 542
Query: 203 RVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLF--VFDRNFLTNGSIYMNSTGNNPS 260
+ +GLIG ++ + + + VFD N + + NP+
Sbjct: 543 DLA--SGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQRFLPNPA 600
Query: 261 IHPQWQPEYFGDVI--VVNGKAWPRMTVRRR---KYRFRIINASNARFFRFFFTNGLRFI 315
PE+ I +NG + + + + I++ F F +G F
Sbjct: 601 GVQLEDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFK 660
Query: 316 HVGSDSAYLGKPVVTNDTV-LAPAEIADVVIDFSE 349
H V DT+ L P V +
Sbjct: 661 HKM----------VYEDTLTLFPFSGETVFMSMEN 685
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 51/293 (17%), Positives = 97/293 (33%), Gaps = 62/293 (21%)
Query: 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG--IDEPE 156
PGP I G + + N L +L V T +H HG
Sbjct: 33 PGPVIAGNVGDNFQIVTFNQLIECSML----------------VDTSIHWHGEFQKGTNW 76
Query: 157 SDGYAKSWFTAGFEE----KGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIG 212
+DG A + G +++ Y+++ G WYH H + GL G
Sbjct: 77 ADG------PAFITQCPIIVGNSFS---YNFNVPGMAGTYWYHSHL-TTQYCD---GLRG 123
Query: 213 AYILRHPDVEAPLRLPSGDVFDRPLFVFD------RNFLTNGSIYMNSTGNNPSIHPQWQ 266
+++ P+ + L D + + D + G+I +ST +
Sbjct: 124 PFVVYDPN-DPDANLYDVDDDTTIITLADWYHVLAKEMGAGGAITADSTLIDGL------ 176
Query: 267 PEYFGDVIVVNGKAWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIH----VGSDS 321
+ V +TV ++YR R+++ S + F H + +D
Sbjct: 177 ---GRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDG-----HDMTIIETDG 228
Query: 322 AYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDA 374
+ + ++ + A+ V++ ++ + I AN +N A
Sbjct: 229 VDS-QELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSA 280
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 55/298 (18%), Positives = 92/298 (30%), Gaps = 73/298 (24%)
Query: 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG--IDEPE 156
GP I + + N L +PT+ PT +H HG
Sbjct: 32 HGPLIRGGKNDNFELNVVNDLD-------NPTMLR---------PTSIHWHGLFQRGTNW 75
Query: 157 SDGYAKSWFTAGFEE----KGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIG 212
+DG G + G + Y + G WYH H + GL G
Sbjct: 76 ADG------ADGVNQCPISPGHAF---LYKFTPAGHAGTFWYHSHFGTQ-YCD---GLRG 122
Query: 213 AYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGD 272
++ + P ++D + +T Y + P+ Q + D
Sbjct: 123 PMVIYDDND------PHAALYDEDD---ENTIITLADWY-----HIPAPSIQGAAQ--PD 166
Query: 273 VIVVNGK---------AWPRMTVRRRK-YRFRIINASNARFFRFFFTNGLRFIH----VG 318
++NGK + V + K YR R+I+ S ++F H +
Sbjct: 167 ATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDG-----HELTIIE 221
Query: 319 SDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANG 376
D +P + + + V+D ++ + I A P G ANG
Sbjct: 222 VDGELT-EPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQ--PNKGRNGLAGTFANG 276
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 54.8 bits (131), Expect = 2e-08
Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 60/265 (22%)
Query: 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPES 157
+ GPT+ A G V ++N P +H G S
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKAH---------------------KPLSIHAQGIKYSKFS 95
Query: 158 DGYAKSWFTAGFEEKG-PTWTNETYHY----HNMQQPGNT-------WYHDHTMGLTRVN 205
+G + S T E+ + Y Y P + Y+ + + N
Sbjct: 96 EGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFN 155
Query: 206 LLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQW 265
+GLIG ++ D +F++ + + S +
Sbjct: 156 --SGLIGPLLICKKGTLTE---------DGTQKMFEKQH----VLMFAVFDESKSWNQTS 200
Query: 266 QPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLG 325
Y + V + + +I S+ NG
Sbjct: 201 SLMYTVNGYVNGTMPDITVCAHDH-ISWHLIGMSSGPELFSIHFNGQVLEQNH------- 252
Query: 326 KPVVTNDTV-LAPAEIADVVIDFSE 349
+ L A + S
Sbjct: 253 ---HKISAITLVSATSTTANMTVSP 274
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 2e-07
Identities = 42/265 (15%), Positives = 70/265 (26%), Gaps = 60/265 (22%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
VPGP + G + +NH V HG
Sbjct: 191 KVPGPFLRVRVGDTVELHLKNHKDSLM-------------------VHSVDFHGATGPGG 231
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYH-NMQQPGNTWYHDHTMGLTRVNLLAGLIGAYI 215
+ + T E PG YH T + ++ G+ G +
Sbjct: 232 AAAF------------TQTDPGEETVVTFKALIPGIYVYHCATPSVP-THITNGMYGLLL 278
Query: 216 L----RHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFG 271
+ P V+ + G+++ +F T+G M + P
Sbjct: 279 VEPEGGLPQVDREFYVMQGEIYTVK------SFGTSGEQEM-DYEKLINEKP-------- 323
Query: 272 DVIVVNGK--AWPR---MTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLG 325
+ + NG + R + R F G F HV S + +
Sbjct: 324 EYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHV-IGEIFDHVYSLGSVVS 382
Query: 326 KPVVTNDTV-LAPAEIADVVIDFSE 349
P++ TV + P V
Sbjct: 383 PPLIGVQTVSVPPGGATIVDFKIDR 407
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 63/308 (20%), Positives = 98/308 (31%), Gaps = 96/308 (31%)
Query: 99 PGPTIEALHGIDT-YVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHG--GIDEP 155
GP I A G DT VT N+L N T +H HG D
Sbjct: 65 MGPNIVANWG-DTVEVTVINNLVTN--------------------GTSIHWHGIXQKDTN 103
Query: 156 ESDGYAKSWFTAGFEE-----KGPTWTNETYHYH-NMQQPGNTWYHDHTMGLTRVNLLAG 209
DG G E KG Y +Q G +WYH H N G
Sbjct: 104 LHDG------ANGVTECPIPPKG-----GQRTYRWRARQYGTSWYHSHF-SAQYGN---G 148
Query: 210 LIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLT-------NGSIYMNSTGNNPSIH 262
++G + + P+ +D L VF +T + ++ P
Sbjct: 149 VVGTIQI-NG--------PASLPYDIDLGVF---PITDYYYRAADDLVHFTQNNAPP--- 193
Query: 263 PQWQPEYFGDVIVVNGK---------AWPRMTVRR-RKYRFRIINASNARFFRFFFTNGL 312
F D +++NG + +T+ +++R RI+N S F+ N
Sbjct: 194 -------FSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVN-- 244
Query: 313 RFIH----VGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAG 368
H + +D + + + LA + DVVID S + + A
Sbjct: 245 ---HTMTVIAADMVPV-NAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVT--FGGQAAC 298
Query: 369 NPVNDANG 376
+ +
Sbjct: 299 GGSLNPHP 306
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 3e-06
Identities = 45/281 (16%), Positives = 73/281 (25%), Gaps = 83/281 (29%)
Query: 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP 155
ASVPGP IE G ++ + N + V +H+HG E
Sbjct: 31 ASVPGPLIEVNEGDTLHIEFTNTMD---------------------VRASLHVHGLDYEI 69
Query: 156 ESDGYAKSW--------FTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGL--TRVN 205
SDG A + T + P G YHDH +G
Sbjct: 70 SSDGTAMNKSDVEPGGTRTYTWRTHKP--GRRDDGTWRPGSAGYWHYHDHVVGTEHGTGG 127
Query: 206 LLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQW 265
+ GL G I+R P D + + N
Sbjct: 128 IRNGLYGPVIVRRKGDVLP---------DATHTIVFNDMTINNRKPHT------------ 166
Query: 266 QPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAY-- 323
R I+ ++ ++ F +G R+ +
Sbjct: 167 ----------------GPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTGP 210
Query: 324 LGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYP 364
V ++ + PA+ + I+A +
Sbjct: 211 DDPSRVIDNKITGPAD-----------SFGFQIIAGEGVGA 240
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 48.5 bits (115), Expect = 3e-06
Identities = 43/281 (15%), Positives = 70/281 (24%), Gaps = 83/281 (29%)
Query: 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP 155
ASVPGP IE G ++ + N + V +H+HG E
Sbjct: 72 ASVPGPLIEVNEGDTLHIEFTNTMD---------------------VRASLHVHGLDYEI 110
Query: 156 ESDGYAKSW--------FTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVN-- 205
SDG A + T + P G YHDH +G
Sbjct: 111 SSDGTAMNKSDVEPGGTRTYTWRTHKP--GRRDDGTWRPGSAGYWHYHDHVVGTEHGTGG 168
Query: 206 LLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQW 265
+ GL G I+ + VF+
Sbjct: 169 IRNGLYGPVIV-RRKGDVLPDATHTIVFN---------------------------DMTI 200
Query: 266 QPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSD--SAY 323
R +I ++ F +G R+ + +
Sbjct: 201 NNRKPHTGPDFEATVGDR-------VEIVMITHGE--YYHTFHMHGHRWADNRTGILTGP 251
Query: 324 LGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYP 364
V ++ + PA+ + I+A +
Sbjct: 252 DDPSRVIDNKITGPAD-----------SFGFQIIAGEGVGA 281
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 9e-06
Identities = 47/308 (15%), Positives = 80/308 (25%), Gaps = 65/308 (21%)
Query: 62 KPKKLEIGMF--EKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHL 119
P+ +E M EKK R+ F SVPGP + + N
Sbjct: 35 GPRVVEFTMTIEEKKLVIDREGTEIHAMTFN-----GSVPGPLMVVHENDYVELRLINPD 89
Query: 120 PPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179
+ N + H G E
Sbjct: 90 T------------NTLLHN-------IDFHAATG-ALGGGAL-----------TQVNPGE 118
Query: 180 TYHYH-NMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLF 238
+PG YH G+ ++ +G+ GA ++ D D +PL
Sbjct: 119 ETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRD-------GLKDEKGQPLT 171
Query: 239 VFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDV-----------IVVNGKAWP----- 282
++ Y+ + E + D IV NG
Sbjct: 172 YDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALTGDH 231
Query: 283 RMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVL-APAEIA 341
+T + R ++++ R R G +V + + P + +T L
Sbjct: 232 ALTAAVGE-RVLVVHSQANRDTRPHLI-GGHGDYVWATGKFRNPPDLDQETWLIPGGTAG 289
Query: 342 DVVIDFSE 349
F +
Sbjct: 290 AAFYTFRQ 297
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 1e-04
Identities = 47/384 (12%), Positives = 84/384 (21%), Gaps = 151/384 (39%)
Query: 33 INPLKLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTS 92
NP +L + + + D + K + K T+
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNW--------KHVNC------DKL-------------TT 357
Query: 93 SLTASVPGPTIEALHGIDTYVTWQNHLPPNH---------ILPIDPTIPTAMPSNKKGVP 143
+ +S+ N L P + P IPT
Sbjct: 358 IIESSL------------------NVLEPAEYRKMFDRLSVFPPSAHIPTI--------- 390
Query: 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTR 203
+ + + + + EK P T ++
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP--KESTISIPSIYLE----LKVKLENEYA 444
Query: 204 VNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHP 263
++ ++ Y P S D+ L Y
Sbjct: 445 LH--RSIVDHY-------NIPKTFDSDDLIPPYLD---------QYFY------------ 474
Query: 264 QWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRII-NASNARFFRFFFTNGLRFIHVGSDSA 322
+ G + + I + FR F + RF+
Sbjct: 475 ----SHIG-------------------HHLKNIEHPERMTLFRMVFLD-FRFLE------ 504
Query: 323 YLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFI 382
K + A I + + I ND Y VN ++ F+
Sbjct: 505 --QKIRHDSTAWNASGSILNTLQQLKFYKP--YICDNDPKYE----RLVNA----ILDFL 552
Query: 383 ILKNRETDPWRVPEKLIEYPSADL 406
++ E LI DL
Sbjct: 553 P---------KIEENLICSKYTDL 567
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 551 | |||
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 100.0 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 100.0 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 100.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 100.0 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 100.0 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 100.0 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 100.0 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 100.0 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 100.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 100.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 100.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 100.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 100.0 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 100.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 100.0 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 100.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 100.0 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 100.0 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 100.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 100.0 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 100.0 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 100.0 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 100.0 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 100.0 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.97 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.84 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 99.79 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 99.79 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.78 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 99.75 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 99.75 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 99.68 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 99.6 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 99.54 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.52 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.5 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.46 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.46 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 99.36 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 99.23 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 99.11 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 99.09 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 99.08 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 99.06 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 99.05 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 99.04 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.01 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 98.83 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.83 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 98.82 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 98.78 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 98.75 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 98.73 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 98.71 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 98.71 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 98.65 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 98.64 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 98.62 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 98.61 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 98.53 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.51 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 98.5 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 98.48 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.46 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.39 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.38 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.37 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.37 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 98.36 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 98.35 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 98.31 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 98.3 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 98.29 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.24 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 98.23 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.18 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.15 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 97.9 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 97.83 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 97.8 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 97.8 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 97.77 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 97.72 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 97.72 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 97.69 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 97.65 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 97.56 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 97.56 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 97.48 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 97.39 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 97.36 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 97.33 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 97.22 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 97.22 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 97.2 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 97.18 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 97.13 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 96.97 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 96.76 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 96.43 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 96.29 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 95.69 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 94.96 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 94.81 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 94.38 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 93.48 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 92.88 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 89.99 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 89.85 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 89.84 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 88.83 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 86.09 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 86.02 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 85.08 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 83.16 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 82.84 | |
| 3isy_A | 120 | Bsupi, intracellular proteinase inhibitor; intrace | 82.11 |
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-90 Score=752.88 Aligned_cols=484 Identities=40% Similarity=0.694 Sum_probs=391.9
Q ss_pred CCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEE
Q 008840 37 KLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQ 116 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~ 116 (551)
+|++|.++||+||++++....+|. .+++|.+.+.+++++++.+.+.+|+|| |++||||||+++||+|+|+++
T Consensus 2 ~~~~~~~~L~~p~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~N-----G~~PGPtI~~~~Gd~v~v~v~ 73 (513)
T 2wsd_A 2 TLEKFVDALPIPDTLKPVQQSKEK---TYYEVTMEECTHQLHRDLPPTRLWGYN-----GLFPGPTIEVKRNENVYVKWM 73 (513)
T ss_dssp CCCSSCSBCCCCCBCCCSEECSSC---EEEEEEEEEEEECSSTTSCCEEEEEET-----TBSSCCBEEEETTCCEEEEEE
T ss_pred CcCcccccCCCCccccccccCCCc---eEEEEEEEEeeeeeCCCCCCceEEEEC-----CCccCceEEECCCCEEEEEEE
Confidence 689999999999999865444453 358888999999999988789999998 999999999999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCC-CCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEe
Q 008840 117 NHLPPNHILPIDPTIPTAMP-SNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYH 195 (551)
Q Consensus 117 N~L~~~~~~~~~~~~~~~~~-~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH 195 (551)
|+|++.+.++++.+++++.. .....++|+|||||+++++.+||+|+.+++||+|.||++|.+++|+|++++++||||||
T Consensus 74 N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH 153 (513)
T 2wsd_A 74 NNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYH 153 (513)
T ss_dssp ECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCCGGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEE
T ss_pred eCCCccccCccccccccccccccCCCCCcEEEcCCCcCCCccCCCCcccccCCcccCCCccceEEEEEecCCCccceEEC
Confidence 99998888888888876421 13445699999999999999999999889999999996555559999998899999999
Q ss_pred ccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCC--CC-CCCCCCCccCCc
Q 008840 196 DHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNN--PS-IHPQWQPEYFGD 272 (551)
Q Consensus 196 ~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~--~~-~~~~~~~~~~gd 272 (551)
||.++.+++|+++||+|+|||++++ +.++.+|+. ++|++|+|+||+++.+|++.+.....+ +. ..+.|..++.++
T Consensus 154 ~H~~~~t~~q~~~Gl~G~liV~~~~-~~~~~lp~~-d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 231 (513)
T 2wsd_A 154 DHAMALTRLNVYAGLVGAYIIHDPK-EKRLKLPSD-EYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE 231 (513)
T ss_dssp ECCTTTHHHHHHHTCEEEEEEECGG-GGGGCCCCG-GGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCS
T ss_pred CCCCCcchhhhhccCeEEEEEeccc-cccccCCCC-CCcEEEEEEeeecCCCCceecccccccccccccccccccccccc
Confidence 9999999999999999999999776 556778886 899999999999999999876532111 00 023456677899
Q ss_pred eEEECCcccCceeecCeEEEEEEEecCCCceEEEEEcCCc-eEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCC
Q 008840 273 VIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGL-RFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSEST 351 (551)
Q Consensus 273 ~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~g~-~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~ 351 (551)
+++|||+.+|+++|++++|||||||+|+++.++|+| +|| +|+||++||+++++|+.+++|.|+|||||||+|++++.+
T Consensus 232 ~~liNG~~~p~~~v~~~~~RlRliNa~~~~~~~~~i-~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~ 310 (513)
T 2wsd_A 232 TILVNGKVWPYLEVEPRKYRFRVINASNTRTYNLSL-DNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYE 310 (513)
T ss_dssp EEEETTEESCEEECCSSEEEEEEEECCSSCCEEEEE-TTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGT
T ss_pred eEEECCcccceEEecCCEEEEEEEccCCcceEEEEE-CCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCC
Confidence 999999999999999999999999999999999999 588 999999999999889999999999999999999999877
Q ss_pred CceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCC-CCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCCCcceE
Q 008840 352 SDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR-ETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHL 430 (551)
Q Consensus 352 g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~-~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g~~~~~ 430 (551)
|..+.|.+.... .+.........||+|++.+.. ..++..+|..|...+.++...+..+|.+.|....+..|. ..|
T Consensus 311 g~~~~l~~~~~~---~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~ 386 (513)
T 2wsd_A 311 GESIILANSAGC---GGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQDEYGR-PVL 386 (513)
T ss_dssp TCEEEEEECCCS---SSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEECTTSC-EEE
T ss_pred CcEEEEEecccc---cccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeecCCCCC-ceE
Confidence 777888875421 111111234589999987532 234556788777655444444556788887754443343 358
Q ss_pred EEcccccCCCCCCCcc--eeeeEEEEeeeeeeeeeccccCceeeeeeeecc---------------CCccCCCCcCCCcC
Q 008840 431 LINAKTLEDPVTETPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHAC---------------GKKQAVPVHEQGWK 493 (551)
Q Consensus 431 ~INg~~f~~~~~~~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~---------------G~~~~~~~~e~~wk 493 (551)
+|||+.|+++....++ .+++|.|.|.+...|+||+|+|.| ++..... |.+.++..++++||
T Consensus 387 ~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F--~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 464 (513)
T 2wsd_A 387 LLNNKRWHDPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSF--RVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWK 464 (513)
T ss_dssp EETTBCTTSCCCBCCBTTCEEEEEEEECSSSCEEEEESSCCE--EEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCB
T ss_pred eECCccCCCcccEecCCCCEEEEEEEcCCCCCcCEeEeCceE--EEEEecCcccccccccccccccCCCCCCCccccCcc
Confidence 8999999876443333 389999999988899999999955 4544221 22223456778999
Q ss_pred ccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 494 NVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 494 DTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
|||.|+||++++|++||+ + ||| ||||||||+|||.|||+.|+|.
T Consensus 465 DTv~v~pg~~~~i~~~f~--d-----------npG~w~~HCHil~H~~~GMm~~~~V~ 509 (513)
T 2wsd_A 465 DTIQAHAGEVLRIAATFG--P-----------YSGRYVWHCHALEHEDYDMMRPMDIT 509 (513)
T ss_dssp SEEEECTTEEEEEEEECC--S-----------CCEEEEEEESCHHHHTTTCEEEEEEB
T ss_pred cEEEeCCCCEEEEEEEec--C-----------CCCCEEEEcCChhhhhcCCceeEEEe
Confidence 999999999999999996 1 788 9999999999999999999996
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-87 Score=746.50 Aligned_cols=487 Identities=29% Similarity=0.454 Sum_probs=366.2
Q ss_pred CCcCCCCCCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCC
Q 008840 30 GGLINPLKLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGI 109 (551)
Q Consensus 30 ~~~~~~~~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd 109 (551)
..+.++..+++|.++||+||++++... .+ ..+++|.+++.+++++++++.+++|+|| |++|||||+|++||
T Consensus 3 ~~~p~p~~~~~f~~pl~~pp~~~~~~~-~~---~~~~~i~~~~~~~~~~~~~~~t~~~gyN-----g~~PGPti~~~~Gd 73 (612)
T 3gyr_A 3 EQAPAPGELTPFAAPLTVPPVLRPASD-EV---TRETEIALRPTWVRLHPQLPPTLMWGYD-----GQVPGPTIEVRRGQ 73 (612)
T ss_dssp ----CTTCCCTTCSBCCCCCEECCCCS-CT---TBCEEEEEEEEEECSCTTSCCEEEEEET-----TBSSCCEEEEETTC
T ss_pred ccCCCCCCCCcccccCCCCCccCCccC-CC---cceEEEEEEEEEEeecCCCCcceEEEEC-----CcccCcEEEEeCCc
Confidence 345667889999999999999976432 22 1468899999999999999889999998 99999999999999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCCC----CCC------CC----------CCCCCCeEEeeCCCCCCCCCCCCCCcceeccc
Q 008840 110 DTYVTWQNHLPPNHILPIDPTIP----TAM------PS----------NKKGVPTVVHLHGGIDEPESDGYAKSWFTAGF 169 (551)
Q Consensus 110 ~v~v~l~N~L~~~~~~~~~~~~~----~~~------~~----------~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~ 169 (551)
+|+|+|+|+|++.+.+.++.... +.. +. ....+.|+|||||+++++.+||+| ||+
T Consensus 74 ~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~~~DGv~-----q~~ 148 (612)
T 3gyr_A 74 RVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTGGGNDGWA-----DNA 148 (612)
T ss_dssp CEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCCTTTSCCG-----GGC
T ss_pred EEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccCCCCceEEcCCCccCCcccCcc-----cCc
Confidence 99999999999854332110000 000 00 124567999999999999999975 678
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCc
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGS 249 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~ 249 (551)
|.||++| +|+|+++|++||||||+|.++.++.|+++||+|+|||+|++ +..+.+|.+ ++|++|+|+||+|+.+++
T Consensus 149 I~PG~~~---~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~-~~~~~~p~~-d~e~~lvl~Dw~~~~~~~ 223 (612)
T 3gyr_A 149 VGFGDAQ---LSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDE-EDALGLPSG-DREIPLLIADRNLDTDED 223 (612)
T ss_dssp BCTTCEE---EEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHH-HHTTTCCCG-GGEEEEEEEEECEEECTT
T ss_pred cCCCCCE---EEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCcc-ccccCCCCC-CccEEEEEEEEecccccc
Confidence 9999999 99999998899999999999999999999999999999877 667778886 999999999999987765
Q ss_pred eEecC---------CCCCCCCCCCCCCccCCceEEECCcccCceeecCeEEEEEEEecCCCceEEEEEcCCc-------e
Q 008840 250 IYMNS---------TGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGL-------R 313 (551)
Q Consensus 250 ~~~~~---------~g~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~g~-------~ 313 (551)
..+.. ....+.....+..++.|+.++|||+.+|.+.|++++|||||||+|+++.|+|+|. +| +
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~p~~~v~~~~yRlRliNas~~~~~~l~i~-~h~~~~~~~~ 302 (612)
T 3gyr_A 224 GRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIWPYADVDDGWYRLRLVNASNARIYNLVLI-DEDDRPVPGV 302 (612)
T ss_dssp SCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEESCEEEEESSEEEEEEEECCSSCCEEEEEE-CTTSCBCTTS
T ss_pred cccccccccCCccccccCCCCCCccccCccCceeeecCCccceEeccCcEEEEEEEeccCCcceeEEEc-cCCCccCCce
Confidence 43211 0111111122334677999999999999999999999999999999999999995 65 6
Q ss_pred EEEEEcCCCCCCCceEec------EEEEccCceEEEEEEcCCCCCceEEEecCCCCCCC-CCCC-CCCCCCceEEEEEcc
Q 008840 314 FIHVGSDSAYLGKPVVTN------DTVLAPAEIADVVIDFSESTSDVAILANDAPYPYP-AGNP-VNDANGKVMKFIILK 385 (551)
Q Consensus 314 ~~via~DG~~l~~P~~~~------~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~-~g~~-~~~~~~~vm~f~v~~ 385 (551)
|+|||+||++|++|+.++ .|.|+|||||||||++++..+.++.+.+....... .... .......++++++..
T Consensus 303 ~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (612)
T 3gyr_A 303 VHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRE 382 (612)
T ss_dssp EEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEEC
T ss_pred EEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccC
Confidence 999999999998888764 79999999999999999988888888876432111 0011 112345799999887
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CccCceeeEEee-----------------eec----------------ccCCCCcceEE
Q 008840 386 NRETDPWRVPEKLIEYPSAD-LSAASTTRYIAM-----------------YEY----------------TSNTGKPTHLL 431 (551)
Q Consensus 386 ~~~~~~~~lP~~L~~~~~~~-~~~~~~~r~~~l-----------------~~~----------------~~~~g~~~~~~ 431 (551)
....+...+|..+....... .......+...+ ... ....+....|.
T Consensus 383 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (612)
T 3gyr_A 383 TCEEDSFALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYR 462 (612)
T ss_dssp CSCCCCCCCCSSCCSSCCCCCTTSCCEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEE
T ss_pred CCCCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccCCCcccccc
Confidence 66556667777665432211 111111111111 000 00112345678
Q ss_pred EcccccCCCCCCCcc--eeeeEEEEeeeeeeeeeccccCceeeeeeeecc---------------------CCccCCCCc
Q 008840 432 INAKTLEDPVTETPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHAC---------------------GKKQAVPVH 488 (551)
Q Consensus 432 INg~~f~~~~~~~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~---------------------G~~~~~~~~ 488 (551)
+|++.|++.....++ .+++|.|.|.+.+.|+||+|+|.| +|..... ....++.++
T Consensus 463 ~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F--~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (612)
T 3gyr_A 463 RTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADF--QVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPN 540 (612)
T ss_dssp EEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEE--EEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTT
T ss_pred ccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcE--EEEeecCCcCccccccccccccccccccccccCcccc
Confidence 999999875444333 289999999999999999999955 5543210 011245678
Q ss_pred CCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 489 EQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 489 e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
+++|||||.|++|++++|++||+ +||| ||||||||+|||+|||++|+|+.
T Consensus 541 ~~~~kDTv~v~~~~~v~i~~rfa-------------dnpG~w~~HCHil~Hed~GMM~~f~V~~ 591 (612)
T 3gyr_A 541 ELGHKDVFQVPGPQGLRVMGKFD-------------GAYGRFMYHCHLLEHEDMGMMRPFVVMP 591 (612)
T ss_dssp CSSCBSEEEECSSEEEEEEEECC-------------SCCEEEEEEESSHHHHHTTCEEEEEEEC
T ss_pred cCCCCcEEEECCCCEEEEEEEeC-------------CCCcceEEcCCChHHHhCcCCcceEEeC
Confidence 89999999999999999999986 2788 99999999999999999999973
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-85 Score=706.08 Aligned_cols=435 Identities=21% Similarity=0.332 Sum_probs=343.4
Q ss_pred ccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCC
Q 008840 43 DELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPN 122 (551)
Q Consensus 43 ~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~ 122 (551)
.+||+||++++. .+ ..+++.+.+.++++ ++. .+.+|+|| |++||||||+++||+|+|+++|+|++
T Consensus 4 ~~LpiP~~~~~~---~~----~~~~l~~~~~~~~~-~G~-~~~~~~~N-----G~~pGP~i~~~~Gd~v~v~~~N~l~~- 68 (488)
T 3od3_A 4 PTLPIPDLLTTD---AR----NRIQLTIGAGQSTF-GGK-TATTWGYN-----GNLLGPAVKLQRGKAVTVDIYNQLTE- 68 (488)
T ss_dssp CBCCCCCEECCC---TT----SEEEEEEEEEEEEE-TTE-EEEEEEES-----SSSBCCEEEEETTCEEEEEEEECSSS-
T ss_pred CCCCCCCcccCC---CC----eeEEEEEEEEEEcc-CCe-EEEEEEEC-----CcCCCCeEEEeCCeEEEEEEEeCCcC-
Confidence 689999999752 12 25777788888888 555 78999998 99999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCch
Q 008840 123 HILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLT 202 (551)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t 202 (551)
+|+|||||+++++.+||+| +|+|.||++| +|+|+++|++||||||||.++.+
T Consensus 69 --------------------~tsiHwHG~~~~~~~DG~p-----~~~i~PG~~~---~Y~f~~~~~aGT~wYH~H~~~~t 120 (488)
T 3od3_A 69 --------------------ETTLHWHGLEVPGEVDGGP-----QGIIPPGGKR---SVTLNVDQPAATCWFHPHQHGKT 120 (488)
T ss_dssp --------------------CBCCEEETCCCCHHHHCCT-----TCCBCTTCEE---EEEEECCSCSEEEEEECCCTTTH
T ss_pred --------------------ceeEeecccccCcccCCCC-----cCcCcCCCeE---EEEEecCCCceeEEEEecCCCcc
Confidence 8999999999999999987 5789999999 99999987899999999999999
Q ss_pred hhhhhccceEEEEEeCCCCCCCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc
Q 008840 203 RVNLLAGLIGAYILRHPDVEAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW 281 (551)
Q Consensus 203 ~~qv~~GL~G~~iV~dp~~~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~ 281 (551)
+.|+++||+|+|||++++ +..+.+|+.+ ++|++|+|+||+++.+|++.+.... .....++.||.++|||+.+
T Consensus 121 ~~q~~~GL~G~liV~~~~-~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~------~~~~~g~~gd~~lvNG~~~ 193 (488)
T 3od3_A 121 GRQVAMGLAGLVVIEDDE-ILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDV------MTAAVGWFGDTLLTNGAIY 193 (488)
T ss_dssp HHHHHTTCCEEEEEECHH-HHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSH------HHHHHCCCCSEEEETTBSS
T ss_pred hhhhhccceeEEEEcCcc-ccccCCcccCCccceeEEEEEeeecCCCceeccccc------cccccCCCCCEEEEcCCcC
Confidence 999999999999999876 5566777743 5799999999999999887543210 0001245689999999999
Q ss_pred CceeecCeEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 282 PRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 282 P~~~v~~~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|++.+++++|||||||+|+++.|+|+|.|||+|+||++||+++.+|+.+++|.|+|||||||+|++++ +++|.|++..
T Consensus 194 p~~~v~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~--~~~~~l~~~~ 271 (488)
T 3od3_A 194 PQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND--NKPFDLVTLP 271 (488)
T ss_dssp CEEEEEEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT--TCCEEEEECC
T ss_pred ccEecCCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC--CceEEEEEec
Confidence 99999889999999999999999999977999999999999988999999999999999999999997 4588888754
Q ss_pred CCCCCCCCCC--CCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeee--c-----------------
Q 008840 362 PYPYPAGNPV--NDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYE--Y----------------- 420 (551)
Q Consensus 362 ~~~~~~g~~~--~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~--~----------------- 420 (551)
... .|... ......|++++.... .++..+|..|.++++++..+...+|++.|.. .
T Consensus 272 ~~~--~g~~~~~~~~~~~~~~~~~~~~--~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~ 347 (488)
T 3od3_A 272 VSQ--MGMAIAPFDKPHPVMRIQPIAI--SASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQA 347 (488)
T ss_dssp CSS--TTTTSTTTTSCEEEEEEEEEEE--ECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGG
T ss_pred cCC--CCcccccccCccceeEeccccc--CCCCCCCcccccCCCCcccccccceEEEEEecccccccccccccccccccc
Confidence 221 12111 112234666665432 2456789999887764433333345555421 0
Q ss_pred -ccC----------CCC------------cceEEEcccccCCCCC-CCcc--eeeeEEEEeee-eeeeeeccccCceeee
Q 008840 421 -TSN----------TGK------------PTHLLINAKTLEDPVT-ETPK--TLDQTELVNLE-EFKACMNKINDAIKCN 473 (551)
Q Consensus 421 -~~~----------~g~------------~~~~~INg~~f~~~~~-~~~~--~~~~~~l~n~~-~~~~~~~~~~~~~~~~ 473 (551)
... .|. ...|+|||+.|++... ..++ .+++|.+.|.+ .+.|++|.|++.| +
T Consensus 348 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F--~ 425 (488)
T 3od3_A 348 MAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQF--R 425 (488)
T ss_dssp GTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCB--E
T ss_pred cccccccccccccccCccccccccccccccceeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceE--E
Confidence 000 110 1137999999985422 2222 28999999988 6789999999854 6
Q ss_pred eeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 474 LSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 474 v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+.. .+| .++++++.+|||||+|+ |++++|+|+|+. +. ++|| ||||||||+|||+|||++|+|
T Consensus 426 Vl~-~~g--~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~--~~--------~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 426 ILS-ENG--KPPAAHRAGWKDTVKVE-GNVSEVLVKFNH--DA--------PKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp EEE-BTT--BCCCGGGSSSBSEEEES-SSEEEEEECBCS--CC--------CGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred Eec-cCC--CccccccCCceeEEEeC-CCEEEEEEEecc--CC--------CCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 654 467 45556788999999999 999999999983 21 2567 999999999999999999987
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-83 Score=703.98 Aligned_cols=449 Identities=30% Similarity=0.470 Sum_probs=357.3
Q ss_pred CCCCccccccCCCCccccceec----cCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCE
Q 008840 35 PLKLEMFVDELPDMPKIKGYYA----ANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGID 110 (551)
Q Consensus 35 ~~~~~~~~~~lp~pp~~~~~~~----~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~ 110 (551)
++.+++|.++||+||++++... ..|... .++++.+.+.++++.++...+.+|+|| |++||||||+++||+
T Consensus 5 ~p~~~~~~~~lpip~~~~~~~~~~~p~~g~~~-~~~~l~~~~~~~~~~p~~~~~~~~~~N-----G~~PGPtI~~~~Gd~ 78 (534)
T 3abg_A 5 SPQYPMFTVPLPIPPVKQPRLTVTNPVNGQEI-WYYEVEIKPFTHQVYPDLGSADLVGYD-----GMSPGPTFQVPRGVE 78 (534)
T ss_dssp CCCCCTTCSBCCCCCBCCCCCSCCSTTSSSCC-EEEEEEEECCEECCSTTTCCEECBEET-----SCSSEEEEEEETTCC
T ss_pred CCCccccCCCCCCCCccCccccccccCCCCce-EEEEEEEEEEEEEecCCCCceeEEEEC-----CcCcCceEEEeCCcE
Confidence 4556999999999999986421 134322 367888888888899888678999998 999999999999999
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCc
Q 008840 111 TYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPG 190 (551)
Q Consensus 111 v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~G 190 (551)
|+|+++|+|+. +|+|||||+++++.+||+|+ |.|.||++| +|+|+++|++|
T Consensus 79 v~v~v~N~l~~---------------------~tsiHwHGl~~~~~~DG~~~-----~~i~PG~~~---~Y~f~~~~~~G 129 (534)
T 3abg_A 79 TVVRFINNAEA---------------------PNSVHLHGSFSRAAFDGWAE-----DITEPGSFK---DYYYPNRQSAR 129 (534)
T ss_dssp EEEEEEECSSS---------------------CBCEEEETCCCCTTTTTCSS-----SCBSSCSCC---CEEECCCSSSC
T ss_pred EEEEEEECCCC---------------------CceEEECCCcCCCCCCCCCC-----CCCCCCCeE---EEEEecCCcce
Confidence 99999999997 89999999999999999864 568999999 99999988899
Q ss_pred eeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCcc
Q 008840 191 NTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEY 269 (551)
Q Consensus 191 t~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~ 269 (551)
|||||||.++.++.|+++||+|+|||++++ +..+.+|+.+ ++|++|+|+||.++.+|++.+.. + ...++
T Consensus 130 T~WYH~H~~~~t~~q~~~Gl~G~liV~~~~-~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~~~-~--------~~~~~ 199 (534)
T 3abg_A 130 TLWYHDHAMHITAENAYRGQAGLYMLTDPA-EDALNLPSGYGEFDIPMILTSKQYTANGNLVTTN-G--------ELNSF 199 (534)
T ss_dssp EEEEEECCTTCHHHHHHTBCEEEEEEECTT-TTTSCTTCCHHHHSCCEEEEEECBCSSSCBCCCT-T--------CSSCC
T ss_pred eEEEecCccccchhhhhhcceEEEEEECCc-ccccCCCccCCcceEEEEEeeeeecCCCceeccC-C--------CCccc
Confidence 999999999999999999999999999877 6677788742 78999999999999998875431 1 12356
Q ss_pred CCceEEECCcccCceeecCeEEEEEEEecCCCceEEEEEcC------CceEEEEEcCCCCCCCceEecEEEEccCceEEE
Q 008840 270 FGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTN------GLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADV 343 (551)
Q Consensus 270 ~gd~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~------g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dV 343 (551)
.+|.++|||+.+|+++|++++|||||||+|+++.|.|+|.+ ||+|+||++||+++.+|+.+++|.|+|||||||
T Consensus 200 ~gd~~lvNG~~~p~~~v~~~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dv 279 (534)
T 3abg_A 200 WGDVIHVNGQPWPFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEV 279 (534)
T ss_dssp CCSEEEETTEESCBCBCCSSEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred cCceeccCCccCceEEecCcEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEE
Confidence 78999999999999999999999999999999999999953 399999999999887999999999999999999
Q ss_pred EEEcCCCCCceEEEecCCCCCCCCCC-CCCCCCCceEEEEEccCC-CCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc
Q 008840 344 VIDFSESTSDVAILANDAPYPYPAGN-PVNDANGKVMKFIILKNR-ETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT 421 (551)
Q Consensus 344 lv~~~~~~g~~~~L~~~~~~~~~~g~-~~~~~~~~vm~f~v~~~~-~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~ 421 (551)
+|++++.+|++|+|++........+. .....+..||+|++.... ..++..+|..|.+++... ......|.+.+...
T Consensus 280 lv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~~p~-~~~~~~~~~~~~~~- 357 (534)
T 3abg_A 280 VFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVPFPS-PTTNTPRQFRFGRT- 357 (534)
T ss_dssp EEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCSCCC-CCCCCCEEEECSCC-
T ss_pred EEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCCCCC-CccccceEEEEecc-
Confidence 99999877778999985421111111 111234589999887643 234556888887655322 22234566655321
Q ss_pred cCCCCcceEEEcccccCCCCCC---Ccc--eeeeEEEEeee-eeeeeeccccCceeeeeeeeccCCc-cCCCCcCCCcCc
Q 008840 422 SNTGKPTHLLINAKTLEDPVTE---TPK--TLDQTELVNLE-EFKACMNKINDAIKCNLSKHACGKK-QAVPVHEQGWKN 494 (551)
Q Consensus 422 ~~~g~~~~~~INg~~f~~~~~~---~~~--~~~~~~l~n~~-~~~~~~~~~~~~~~~~v~~~~~G~~-~~~~~~e~~wkD 494 (551)
...|+|||+.|.+.... ..+ .+++|.+.|.+ .+.|+||+|+|.| .+....+|.. ..+.+.+.+|||
T Consensus 358 -----~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F--~Vl~~~~g~~~~~~~~~~~~~rD 430 (534)
T 3abg_A 358 -----GPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDF--KVISRTSGNNARTVMPYESGLKD 430 (534)
T ss_dssp -----CSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCE--EEEEESSCCSSSCCCSGGGSCBS
T ss_pred -----CceeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeE--EEEEEcCCCCcCcCCccccCCcC
Confidence 12589999999754221 111 28899999987 4689999999954 6665434421 123334459999
Q ss_pred cEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 495 VYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 495 TV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
||.|+||++++|+++|. +||| ||||||||+|||.|||+.|+|.
T Consensus 431 TV~v~pg~~v~I~~~~a-------------dnpG~w~~HCHil~H~d~GMm~~~~V~ 474 (534)
T 3abg_A 431 VVWLGRRETVVVEAHYA-------------PFPGVYMFHCHNLIHEDHDMMAAFNAT 474 (534)
T ss_dssp EECCCSSEEEEEEEECC-------------SCCEEEEEEESCHHHHHTTCEEEEEEC
T ss_pred eEEcCCCCEEEEEEEEC-------------CCCccEEEecChHHHHhcCCceEEEEE
Confidence 99999999999999865 2788 9999999999999999999986
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-83 Score=691.21 Aligned_cols=439 Identities=22% Similarity=0.321 Sum_probs=352.8
Q ss_pred CcCCCCCCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCE
Q 008840 31 GLINPLKLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGID 110 (551)
Q Consensus 31 ~~~~~~~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~ 110 (551)
..+.+...=++..+|.+||.+.+....++. .++++.+.+.++++.++. .+.+|+|| |++||||||+++||+
T Consensus 21 ~~l~~~~~~p~~~~l~~~p~l~~~~~~~~~---~~~~L~~~~~~~~~~~G~-~~~~~~~N-----G~~PGPtIr~~~Gd~ 91 (481)
T 3zx1_A 21 LKLLDPKQFPQGEILKALPLLKNESKEKNI---FHATLEIKENHIELIKGK-KTLFYTYN-----GLVPAPKIEVFEGDK 91 (481)
T ss_dssp CCBCCGGGSCBSCBCCCCCBCCCCCCSTTE---EEEEEEEEEEEECCSTTC-CEEEEEET-----TBSSCCBEEEETTCE
T ss_pred ceeeccccCCCcCcCCCCCccCCcccCCCe---EEEEEEEEEEEEEccCCc-EEEEEEEC-----CCCCCceEEEECCcE
Confidence 345555555688999999999865444443 468888889999987776 78999998 999999999999999
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCcc-C
Q 008840 111 TYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQ-P 189 (551)
Q Consensus 111 v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~-~ 189 (551)
|+|+|+|+|++ +|+|||||+++++.+||+| ||+|.||++| +|+|++.++ +
T Consensus 92 v~v~v~N~l~~---------------------~tsiHwHGl~~~~~~DG~p-----q~~I~PG~s~---~Y~f~~~~~~~ 142 (481)
T 3zx1_A 92 LEILVKNKLKE---------------------ATTIHWHGVPVPPDQDGSP-----HDPILAGEER---IYRFEIPQDSA 142 (481)
T ss_dssp EEEEEEECSSS---------------------CBCCEEETCCCCGGGSCCT-----TSCBCTTCEE---EEEEECCTTCC
T ss_pred EEEEEEeCCCC---------------------CeeEEecCcccCCccCCCc-----cCcCCCCCeE---EEEEeCCCCCC
Confidence 99999999998 8999999999999999986 5789999999 999999754 7
Q ss_pred ceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCcc
Q 008840 190 GNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEY 269 (551)
Q Consensus 190 Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~ 269 (551)
||||||||.++.++.|+++||+|+|||++++ +..+.+|. ++ |+|+||+++.+|++... ....|..+.
T Consensus 143 GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~-~~~~~~~~----~~-l~l~D~~~~~~g~~~~~-------~~~~~~~g~ 209 (481)
T 3zx1_A 143 GTYWYHPHPHYTASKQVFMGLAGAFVIKAKK-DALSHLKE----KD-LMISDLRLDENAQIPNN-------NLNDWLNGR 209 (481)
T ss_dssp EEEEEECCCTTTHHHHHHTTCCEEEEEECSS-CTTTTSEE----EE-EEEEEECCBTTSCCCCC-------CHHHHHHCC
T ss_pred ceEEEeecCCCcchhhhhccceEEEEEcCcc-ccccCCCc----ee-EEEEEEeccCCCccccc-------cchhhccCC
Confidence 9999999999999999999999999999876 44444443 33 99999999998876411 001223356
Q ss_pred CCceEEECCcccCceeecCeEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCC
Q 008840 270 FGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSE 349 (551)
Q Consensus 270 ~gd~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~ 349 (551)
.||.++|||+.+|.++|++++ ||||||+|+++.|.|+| +|+.|+||++||+++.+|+.+++|.|+|||||||+|++++
T Consensus 210 ~gd~~lvNG~~~p~l~v~~g~-RlRliNa~~~~~~~l~i-~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~ 287 (481)
T 3zx1_A 210 EGEFVLINGQFKPKIKLATNE-RIRIYNATAARYLNLRI-QGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK 287 (481)
T ss_dssp CCSEEEETTEESCEEEEETTE-EEEEEECCSSCCEEEEE-TTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS
T ss_pred cCCEEEECCccCceEEecCCC-EEEEEecCCCeEEEEEE-CCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC
Confidence 789999999999999999977 99999999999999999 5999999999999999999999999999999999999997
Q ss_pred CCCceEEEecCCCCCCCCCCC--CCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCC--
Q 008840 350 STSDVAILANDAPYPYPAGNP--VNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTG-- 425 (551)
Q Consensus 350 ~~g~~~~L~~~~~~~~~~g~~--~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g-- 425 (551)
+++|.|.+..... .|.. .......|++|++.+ ....+|..|.+++.++.+. ++|++.|.......+
T Consensus 288 --~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~----~~~~lP~~l~~~~~~~~~~--~~r~~~l~~~~~~~~~~ 357 (481)
T 3zx1_A 288 --DGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKK----ENVELPKNLKIFKPSEEPK--EFKEIIMSEDHMQMHGM 357 (481)
T ss_dssp --CEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEEC----CCCCCCSCSCCCCCCCCCC--EEEEEEEEECCSTTTTG
T ss_pred --CcEEEEEEecccc--cCccccCCCCceeEEEEecCC----CCccCCccccCCCCCCCCC--cEEEEEEeccchhcccc
Confidence 3589998754221 1111 112345789999876 2356898888877654443 678888764321111
Q ss_pred ----Cc-------ceEEEcccccCCCC-CCCcc--eeeeEEEEeeeeeeeeeccccCceeeeeeeec-cCCccCCCCcCC
Q 008840 426 ----KP-------THLLINAKTLEDPV-TETPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHA-CGKKQAVPVHEQ 490 (551)
Q Consensus 426 ----~~-------~~~~INg~~f~~~~-~~~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~-~G~~~~~~~~e~ 490 (551)
.. ..|+|||+.|++.. ...++ .+++|.+.|.+.+.|++|.|++.| ++.... +|. ++.++++
T Consensus 358 ~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F--~vl~~~~~g~--~~~~~~~ 433 (481)
T 3zx1_A 358 MGKSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQF--ELISSKLNGK--VQKAEFR 433 (481)
T ss_dssp GGCCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEEEEEEECSSSCEEEEETTCCE--EEEEEEETTE--EEECSSC
T ss_pred cccccccccccccceeEECCEeCCCCCceEEeCCCCEEEEEEEcCCCCceeEEEeccEE--EEEEecccCC--CCCcccC
Confidence 01 24999999998532 12222 289999999999999999999954 555432 663 4446789
Q ss_pred CcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 491 GWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 491 ~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+|||||.|.||++++|+|+|+ +|| ||||||||+|||.|||++|+|.
T Consensus 434 ~~kDTv~v~Pg~~~~i~~~~d--------------~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 434 ALRDTINVRPNEELRLRMKQD--------------FKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp CEESEEEECTTCEEEEEECCC--------------SCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred cccceEEECCCCEEEEEEEcC--------------CCeeEEEEcCChHHHhcCCceEEEEe
Confidence 999999999999999999997 778 9999999999999999999996
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-83 Score=685.77 Aligned_cols=429 Identities=20% Similarity=0.265 Sum_probs=344.4
Q ss_pred cccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCC
Q 008840 40 MFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHL 119 (551)
Q Consensus 40 ~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L 119 (551)
.|..+||+||++++. .+ .++++.+.+.++++.++. .+.+|+|| |++|||+||+++||+|+|+|+|+|
T Consensus 2 ~~~~~l~~p~~~~~~---~~----~~~~l~~~~~~~~~~~g~-~~~~~~~n-----g~~pGP~i~~~~Gd~v~v~~~N~l 68 (451)
T 2uxt_A 2 GQQQPLPVPPLLESR---RG----QPLFMTVQRAHWSFTPGT-RASVWGIN-----GRYLGPTIRVWKGDDVKLIYSNRL 68 (451)
T ss_dssp -CCCBCCCCCEECCS---SS----CCEEEEEEECCGGGCSSS-SSCCEEET-----TSSBCCEEEEETTCEEEEEEEECS
T ss_pred CCCccCCCCCcccCC---Cc----eEEEEEEEEEEEEcCCCc-eeEEEEEC-----CcccCceEEEeCCCEEEEEEEECC
Confidence 467889999999742 23 357777888888886665 78999998 999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCC
Q 008840 120 PPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTM 199 (551)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~ 199 (551)
++ +|+|||||+++++.+||+| ||+|.||++| +|+|++++++||||||||.+
T Consensus 69 ~~---------------------~tsiHwHG~~~~~~~DG~~-----~~~i~PG~~~---~Y~f~~~~~~GT~wYH~H~~ 119 (451)
T 2uxt_A 69 TE---------------------NVSMTVAGLQVPGPLMGGP-----ARMMSPNADW---APVLPIRQNAATLWYHANTP 119 (451)
T ss_dssp SS---------------------CBCEEEETCCCCGGGSCSG-----GGCBCTTCEE---CCEEECCSCSEEEEEEECCT
T ss_pred CC---------------------CccEEECCccCCCCCCCCC-----cCcCCCCCeE---EEEEEcCCCCcceEEecCCC
Confidence 97 8999999999999999987 6789999999 99999987799999999999
Q ss_pred CchhhhhhccceEEEEEeCCCCCCCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECC
Q 008840 200 GLTRVNLLAGLIGAYILRHPDVEAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNG 278 (551)
Q Consensus 200 g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG 278 (551)
+.++.|+++||+|+|||++++ +..+++|..+ ++|++|+|+||+++.++++.+...+ ..++.+|.++|||
T Consensus 120 ~~t~~q~~~Gl~G~liV~~~~-~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~~~~~---------~~~~~~d~~liNG 189 (451)
T 2uxt_A 120 NRTAQQVYNGLAGMWLVEDEV-SKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPG---------SGGFVGDTLLVNG 189 (451)
T ss_dssp TTHHHHHHTTCEEEEEEECHH-HHHSSSCCCBTTTEEEEEEEEEEECTTSCEECCCCS---------SSCCCCSEEEETT
T ss_pred CchhhhHhhcceEEEEEecCc-ccccCCCccCCCceEEEEEEeeecCCCCceeccccc---------CCCCcCCEEEECC
Confidence 999999999999999999765 4445567632 7899999999999999988653211 2356789999999
Q ss_pred cccCceeecCeEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEe
Q 008840 279 KAWPRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILA 358 (551)
Q Consensus 279 ~~~P~~~v~~~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~ 358 (551)
+.+|+++|++++|||||||+|+++.+.|+|.|||+|+||+.||+++.+|+.++++.|+|||||||+|++++ +++|+|+
T Consensus 190 ~~~p~~~v~~g~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~ 267 (451)
T 2uxt_A 190 VQSPYVEVSRGWVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN--GDEVSIT 267 (451)
T ss_dssp EESCEEEECSSEEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT--CCCEEEE
T ss_pred cccceEEecCCEEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC--CCEEEEE
Confidence 99999999988999999999999999999955999999999999998899999999999999999999996 3589999
Q ss_pred cCCCCCCCCC------CCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCCCcceEEE
Q 008840 359 NDAPYPYPAG------NPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLI 432 (551)
Q Consensus 359 ~~~~~~~~~g------~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g~~~~~~I 432 (551)
+......... .........|+++++.+........+|..|.+++.++. ....+|++.|.. .|+|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p~~L~~~~~~~~-~~~~~~~~~l~~---------~~~i 337 (451)
T 2uxt_A 268 CGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAG-SPIRSRDISLGD---------DPGI 337 (451)
T ss_dssp C----------------CCCCSCCEEEEEEECSCCC----CCCSCSSSSCCCCC-CCSEEEEEEECS---------SSSB
T ss_pred ecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCccccCCCCCCCC-CCcceEEEEEee---------EEEE
Confidence 8653221100 01112345799999876443334568888888776544 445678887652 4899
Q ss_pred cccccCCCCC-CCcc--eeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEE
Q 008840 433 NAKTLEDPVT-ETPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVR 509 (551)
Q Consensus 433 Ng~~f~~~~~-~~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~ 509 (551)
||++|+.+.. ...+ .+++|.+.|. ..|+||+|+|. |++.. .+| .++...++.|||||.| |++++|+|+
T Consensus 338 Ng~~f~~~~~~~~~~~G~~~~~~l~N~--~~HP~HLHGh~--F~Vl~-~~G--~~~~~~~p~~rDTv~v--g~~~~i~~~ 408 (451)
T 2uxt_A 338 NGQLWDVNRIDVTAQQGTWERWTVRAD--EPQAFHIEGVM--FQIRN-VNG--AMPFPEDRGWKDTVWV--DGQVELLVY 408 (451)
T ss_dssp TTBCCCTTCCCEEEETTCEEEEEEEEE--EEEEEEETTCE--EEEEE-ETT--BCCCGGGSSCBSEEEE--EEEEEEEEE
T ss_pred CCEeCCCCCCcEEcCCCCEEEEEEECC--CCcCeEECCce--EEEEe-eCC--cCCCcccCCCccEEEE--CCEEEEEEE
Confidence 9999986422 1122 2889999987 68999999994 46655 366 3445567899999999 899999999
Q ss_pred EeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 510 FSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 510 f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
|+. .+ .++| ||||||||+|||.|||++|+|..
T Consensus 409 ~dn--pg--------~~~g~w~~HCHil~H~d~GMm~~~~v~~ 441 (451)
T 2uxt_A 409 FGQ--PS--------WAHFPFYFNSQTLEMADRGSIGQLLVNP 441 (451)
T ss_dssp CCS--CC--------BTTBCEEEEESSHHHHHTTCEEEEEEEC
T ss_pred eCC--CC--------CCCCceEEeCCchhHHhCCCcEEEEEcc
Confidence 982 22 2456 99999999999999999999863
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-78 Score=652.07 Aligned_cols=419 Identities=25% Similarity=0.341 Sum_probs=323.7
Q ss_pred CCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCC-CCCcEEEEECCCEEEEEE
Q 008840 37 KLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTAS-VPGPTIEALHGIDTYVTW 115 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~-~PGPti~v~~Gd~v~v~l 115 (551)
++.+..++||+||.+++ + .+++|++ |+|| |+ +||||||+++||+|+|++
T Consensus 3 ~~~~~~~~l~~p~~~~~-----~----~~~~l~~----------------~~~N-----g~~~pGP~i~~~~Gd~v~v~~ 52 (448)
T 3aw5_A 3 EVKRPETSAPVPPLIKE-----A----TYIEATA----------------SGYM-----AEGVLNPTIILRRGQRVDMTL 52 (448)
T ss_dssp --------CCCCCEESC-----C----SEEEEET----------------TEEE-----ETTEESCEEEEETTCEEEEEE
T ss_pred ccccCCCCCCCCcccCC-----C----cEEEEEE----------------EEEC-----CccccCceEEEeCCCEEEEEE
Confidence 46677899999999974 1 2455543 9998 99 999999999999999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEe
Q 008840 116 QNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYH 195 (551)
Q Consensus 116 ~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH 195 (551)
+|+|++ +|+|||||+++++.+||+|+ |+|.||++| +|+|++.|++||||||
T Consensus 53 ~N~l~~---------------------~tsiHwHG~~~~~~~DG~~~-----~~i~PG~~~---~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 53 KNKLTE---------------------PTIVHWHGFDVNWHNDAHPS-----FAITPGESY---NYSFDVVNRAGTYLYH 103 (448)
T ss_dssp EECSSS---------------------CBCEEEETCCCCHHHHTCGG-----GCBCTTCEE---EEEEECCSCSEEEEEE
T ss_pred EECCCC---------------------ceeEEeCCccCCCccCCCCC-----ccCCCCCEE---EEEEEcCCCCCceEec
Confidence 999997 89999999999988999987 689999999 9999998899999999
Q ss_pred ccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEE
Q 008840 196 DHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIV 275 (551)
Q Consensus 196 ~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~l 275 (551)
||.|+.++.|+++||+|+|||++++ +. +.+|.+ .+|++|+|+||+++. +++.+ ..+.. ....++.++.++
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~-~~-~~l~~d-~~e~~l~l~D~~~~~-~~~~~-~~~~~-----~~~~~~~~~~~l 173 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSG-SD-LGFKYG-VNDLPLVISDRRFIG-GAPVY-NPTPM-----EMIAGFLGNAVL 173 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTT-TT-TTCCBT-TTEEEEEEEEEEEET-TEEEC-CCCHH-----HHHHCCCCSEEE
T ss_pred cCCCCchHHHHhccceEEEEEeCCc-cc-cCCCCC-CceEEEEEEeeccCC-Ccccc-ccccc-----ccccCccccEEE
Confidence 9999999999999999999999776 33 556653 489999999999998 88754 11000 011245689999
Q ss_pred ECCcccCceeecCeEEEEEEEecCCCceEEEEE--cC--CceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCC
Q 008840 276 VNGKAWPRMTVRRRKYRFRIINASNARFFRFFF--TN--GLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSEST 351 (551)
Q Consensus 276 VNG~~~P~~~v~~~~~RlRllNas~~~~~~l~l--~~--g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~ 351 (551)
|||+.+|.++|++++|||||||+|+.+.+.|+| .+ ||+|+||++||+++++|+.++++.|+|||||||+|++++
T Consensus 174 iNG~~~p~~~v~~g~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-- 251 (448)
T 3aw5_A 174 VNGVKDAVFKLSGGSYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELGE-- 251 (448)
T ss_dssp ETTEETCEEEEEEEEEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECS--
T ss_pred ECCcccceEEECCCeEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECCC--
Confidence 999999999999889999999999999999999 73 299999999999996699999999999999999999983
Q ss_pred CceEEEecCCCCCCCCC---C----CCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCC
Q 008840 352 SDVAILANDAPYPYPAG---N----PVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNT 424 (551)
Q Consensus 352 g~~~~L~~~~~~~~~~g---~----~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~ 424 (551)
+.|+|++........+ . ........++.|++.+..... . |..|.++++.+. ....+|++.|...
T Consensus 252 -~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--p~~L~~lp~~~~-~~~~~~~~~l~~~---- 322 (448)
T 3aw5_A 252 -GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAV-P--VEALSDPPPEPP-KPTRTRRFALSLS---- 322 (448)
T ss_dssp -EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCC-C--CCCCSCCCCCCC-CCSEEEEEEEEEE----
T ss_pred -CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCC-C--ccccCCCCCCCC-CCCceEEEEEeCC----
Confidence 3799998653221111 0 011123468899986643221 1 566665554333 3345688877642
Q ss_pred CCcceEEEcccccCCCCC-CC-cc--eeeeEEEEeee-eeeeeeccccCceeeeeeeeccCCcc----------CCCCcC
Q 008840 425 GKPTHLLINAKTLEDPVT-ET-PK--TLDQTELVNLE-EFKACMNKINDAIKCNLSKHACGKKQ----------AVPVHE 489 (551)
Q Consensus 425 g~~~~~~INg~~f~~~~~-~~-~~--~~~~~~l~n~~-~~~~~~~~~~~~~~~~v~~~~~G~~~----------~~~~~e 489 (551)
...|+|||++|+.... .. .+ .+++|.+.|.+ .+.|+||+|+|.| ++... +|... ...+.+
T Consensus 323 --~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F--~Vl~~-~G~~~~~~~~~~~~~~~~p~~ 397 (448)
T 3aw5_A 323 --GMQWTINGMFWNASNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPM--WIIER-KDSPRQVAELAVDNRGRLPTD 397 (448)
T ss_dssp --TTEEEETTBCCCTTCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCB--EEEEE-ESCCHHHHTTCCSTTCCCGGG
T ss_pred --CceeeECCCcCCCCCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceE--EEEEe-cCCCcccccccccccCCCccc
Confidence 1259999999986422 22 22 38899999998 8899999999955 55543 45321 013456
Q ss_pred CCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCceEEeeccccccccCcccceEEc
Q 008840 490 QGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 490 ~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg~~~HCHiL~HED~GMM~~~~V~ 550 (551)
++|||||.|+||++++|++||+.+. ++|| ||||||||+|||.|||++|+|.
T Consensus 398 ~~~rDTv~v~pg~~~~i~vrF~~~~---------adnp-w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 398 LGLKDTVLIWPGETVKIVVNFDAKK---------RGQL-FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp GSCBSEEEECTTCEEEEEEEECGGG---------TTCE-EEEEESSHHHHHTTCEEEEEEC
T ss_pred cCCccEEEeCCCCEEEEEEEecccC---------CCCc-EEEEcCChHHHhCCCceEEEeC
Confidence 7899999999999999999997211 2478 9999999999999999999984
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-78 Score=645.36 Aligned_cols=421 Identities=25% Similarity=0.428 Sum_probs=328.3
Q ss_pred ccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCC
Q 008840 43 DELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPN 122 (551)
Q Consensus 43 ~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~ 122 (551)
++|++||+++ +.+|. .++++.+.+.++++. +. .+.+|+|| |++|||+||+++||+|+|+++|+|+.
T Consensus 2 ~~l~~p~~~~---~~~~~---~~~~l~~~~~~~~~~-g~-~~~~~~~n-----g~~pGP~i~~~~Gd~v~v~~~N~l~~- 67 (439)
T 2xu9_A 2 PSFPEPKVVR---SQGGL---LSLKLSATPTPLAIA-GQ-RATLLTYG-----GSFPGPTLRVRPRDTVRLTLENRLPE- 67 (439)
T ss_dssp CSSCCCCEEE---CBTTE---EEEEEEEEEEEEEET-TE-EEEEEEET-----TBSSCCEEEECTTCEEEEEEEECSSS-
T ss_pred CCCCCCceec---cCCCe---EEEEEEEEEEEEEcC-Cc-eEEEEEEC-----CcccCCEEEEeCCCEEEEEEEECCCC-
Confidence 6899999996 34554 467777778877775 43 68899998 99999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcC-ccCceeEEeccCCCc
Q 008840 123 HILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNM-QQPGNTWYHDHTMGL 201 (551)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~-~~~Gt~wYH~H~~g~ 201 (551)
+|+|||||+++++.+||++. .|.||++| +|+|++. +++||||||||.++.
T Consensus 68 --------------------~tsiHwHG~~~~~~~DG~~~------~I~PG~~~---~Y~f~~~~~~~GT~wYH~H~~~~ 118 (439)
T 2xu9_A 68 --------------------PTNLHWHGLPISPKVDDPFL------EIPPGESW---TYEFTVPKELAGTFWYHPHLHGR 118 (439)
T ss_dssp --------------------CBCCEEETCCCCTTTSCTTC------CBCTTCEE---EEEEECCSSCCEEEEEECCCTTS
T ss_pred --------------------CcceEeCCCCCCccccCCcc------cCCCCCeE---EEEEecCCCCCcceEeccCCCCc
Confidence 89999999999999999752 38999999 9999974 389999999999999
Q ss_pred hhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc
Q 008840 202 TRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW 281 (551)
Q Consensus 202 t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~ 281 (551)
++.|+++||+|+|||++++ +..-.+ . .++|++|+|+||+++.+ .+. ... ...+..+..+++++|||+.+
T Consensus 119 t~~q~~~Gl~G~liV~~~~-~~~~~~-~-~~~e~~l~l~D~~~~~~-~~~-~~~------~~~~~~g~~~~~~~iNG~~~ 187 (439)
T 2xu9_A 119 VAPQLFAGLLGALVVESSL-DAIPEL-R-EAEEHLLVLKDLALQGG-RPA-PHT------PMDWMNGKEGDLVLVNGALR 187 (439)
T ss_dssp HHHHHHTTCCEEEEECCGG-GGSHHH-H-TSEEEEEEEEEECEETT-EEC-CCC------HHHHHHCCCCSEEEETTEES
T ss_pred hHHHHHhhCeEEEEEcCcc-ccCccC-C-CCCcEEEEEEeeeeCCC-CcC-CCC------ccccccCCCCCEEEECCccC
Confidence 9999999999999999754 211001 2 27899999999998864 221 000 00111234589999999999
Q ss_pred CceeecCeEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 282 PRMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 282 P~~~v~~~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|.++|++++|||||||+|+++.+.|+| +||+|+||+.||+++.+|+.++++.|+|||||||+|++++ +| +|+|++..
T Consensus 188 p~l~v~~g~~RlRliN~~~~~~~~~~i-~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G-~~~l~~~~ 264 (439)
T 2xu9_A 188 PTLVAQKATLRLRLLNASNARYYRLAL-QDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EG-RFLLQALP 264 (439)
T ss_dssp CEEECSSSEEEEEEEECCSSCCEEEEE-TTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SE-EEEEEEEC
T ss_pred CcEEecCCeEEEEEEecCCCceEEEEE-CCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-Cc-eEEEEecc
Confidence 999998889999999999999999999 6999999999999988899999999999999999999998 44 79998753
Q ss_pred CCCCCC---CC--------CCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCCCcceE
Q 008840 362 PYPYPA---GN--------PVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKPTHL 430 (551)
Q Consensus 362 ~~~~~~---g~--------~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g~~~~~ 430 (551)
...... |. ........++.|++.+.. .+..+|..|.+++.++.+. ..|++.|.... . ...|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~p~~l~~~~~l~~~~--~~r~~~l~~~~--~--g~~~ 336 (439)
T 2xu9_A 265 YDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP--KPLPLPKALSPFPTLPAPV--VTRRLVLTEDM--M--AARF 336 (439)
T ss_dssp CCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC--CCCCCCSCCCCCCCCCCCS--EEEEEEEEEEG--G--GTEE
T ss_pred cccCCccccccccccccccCCCCCcceeEEEEecCCC--ccccCcccCCCcccCCCCC--cceEEEEEeec--c--CceE
Confidence 211000 00 001123468889987654 2345787776665543322 24677665322 1 2369
Q ss_pred EEcccccCCCCC-CCcc--eeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEE
Q 008840 431 LINAKTLEDPVT-ETPK--TLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRIL 507 (551)
Q Consensus 431 ~INg~~f~~~~~-~~~~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~ 507 (551)
+|||++|+.+.. ...+ .+++|.+.|.+.+.|+||+|+|.| ++.. .+|. + ..++.|||||.|+|+++++|+
T Consensus 337 ~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F--~Vl~-~~g~--~--~~~p~~rDTv~v~p~~~v~i~ 409 (439)
T 2xu9_A 337 FINGQVFDHRRVDLKGQAQTVEVWEVENQGDMDHPFHLHVHPF--QVLS-VGGR--P--FPYRAWKDVVNLKAGEVARLL 409 (439)
T ss_dssp EETTBCCCTTCCCEEECTTCEEEEEEEECSSSCEEEEESSCCB--EEEE-ETTE--E--CSSCCCBSEEEECTTCEEEEE
T ss_pred eECCEECCCCCCceecCCCCEEEEEEEcCCCCCCCceeCCCcE--EEEe-eCCC--C--CCCCCCeEEEEeCCCCEEEEE
Confidence 999999986432 1111 288999999999999999999954 5655 3442 1 235789999999999999998
Q ss_pred EEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 508 VRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 508 ~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
++++ ||| ||||||||+|||.|||+.|+|
T Consensus 410 f~ad--------------npG~w~~HCHil~H~~~GMm~~~~V 438 (439)
T 2xu9_A 410 VPLR--------------EKGRTVFHCHIVEHEDRGMMGVLEV 438 (439)
T ss_dssp EECC--------------SCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred EEcC--------------CCCCEEEECCcchhhhcCCcEEEEe
Confidence 8865 789 999999999999999999998
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-73 Score=617.78 Aligned_cols=413 Identities=15% Similarity=0.210 Sum_probs=294.9
Q ss_pred eEEEEEEEEEEeecCCCC-CccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 65 KLEIGMFEKKWKFHRDLP-PTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~-~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
++++.+.+.+ +.++.. .+.+|+|| |++||||||+++||+|+|+++|+|+..+ ...+
T Consensus 25 ~~~l~i~~~~--~~~dg~~~~~~~~~N-----G~~PGP~i~~~~Gd~v~v~v~N~l~~~~----------------~~~~ 81 (521)
T 1v10_A 25 ALDLHILNAN--LDPDGTGARSAVTAE-----GTTIAPLITGNIDDRFQINVIDQLTDAN----------------MRRA 81 (521)
T ss_dssp EEEEEEEEEE--ECTTSSCCEEEEEES-----SSSSCCCEEEETTCEEEEEEEECCCCTT----------------SCCC
T ss_pred eEEEEEEEEE--EcCCCcceEEEEEEC-----CccCCCcEEEeCCCEEEEEEEECCCCcc----------------CCCC
Confidence 3455555554 445554 78999998 9999999999999999999999998310 0128
Q ss_pred eEEeeCCCCCC--CCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCC
Q 008840 144 TVVHLHGGIDE--PESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDV 221 (551)
Q Consensus 144 t~iH~HG~~~~--~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~ 221 (551)
|+|||||+++. +.+||+|+ ++||+|.||++| +|+|++.+++||||||||.+ .|+++||+|+|||++++
T Consensus 82 tsiHwHGl~~~~~~~~DGv~~--vtq~~I~PG~s~---~Y~f~~~~~~GT~wYH~H~~----~q~~~Gl~G~liV~~~~- 151 (521)
T 1v10_A 82 TSIHWHGFFQAGTTEMDGPAF--VNQCPIIPNESF---VYDFVVPGQAGTYWYHSHLS----TQYCDGLRGAFVVYDPN- 151 (521)
T ss_dssp BCEEEETCCCTTCGGGSCCBT--TTBCCBCTTEEE---EEEEECTTCCEEEEEEECST----TGGGGTCEEEEEEECTT-
T ss_pred ceEecCCeeccCCCccCCCcc--eeeCCcCCCCeE---EEEEecCCCCccEEEEeccC----CchhcCceEEEEEcCCc-
Confidence 99999999995 45999998 899999999999 99999767999999999985 49999999999999765
Q ss_pred CCCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc----------CceeecC-e
Q 008840 222 EAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW----------PRMTVRR-R 289 (551)
Q Consensus 222 ~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~----------P~~~v~~-~ 289 (551)
+ +...+... ++|++|+|+||+++.++++.+...+. ...+|.++|||+.+ |.++|++ +
T Consensus 152 ~-~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~~~~~~----------~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~ 220 (521)
T 1v10_A 152 D-PHLSLYDVDDASTVITIADWYHSLSTVLFPNPNKA----------PPAPDTTLINGLGRNSANPSAGQLAVVSVQSGK 220 (521)
T ss_dssp C-TTGGGCSBCSGGGEEEEEEECSSCCC-------CC----------CSCCSEEEETTBCCCSSCGGGSCCCEEEECTTC
T ss_pred c-cccccCCCCCceeEEEEcccccCCHHHHhhccCCC----------CCCCCEEEECCcccCCCCCCCCCceEEEECCCC
Confidence 2 22111221 35899999999999888875421111 23478999999987 8999998 8
Q ss_pred EEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCC
Q 008840 290 KYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGN 369 (551)
Q Consensus 290 ~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~ 369 (551)
+|||||||+|+.+.+.|+| +||+|+||+.||+++ +|+.+++|.|+|||||||+|++++.+| +|+|++...... .+
T Consensus 221 ~~RlRliNa~~~~~~~~~i-~gh~~~vi~~DG~~~-~p~~~~~l~l~pgqR~dvlv~~~~~~g-~y~i~~~~~~~~-~~- 295 (521)
T 1v10_A 221 RYRFRIVSTSCFPNYAFSI-DGHRMTVIEVDGVSH-QPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGR-NG- 295 (521)
T ss_dssp EEEEEEEECCSSCCEEEEE-TTCCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSS-CS-
T ss_pred EEEEEEEecCCcccEEEEE-CCCeEEEEecCCccc-cceeeeeEEEcccceEEEEEEcCCCCC-ceeeeecccccc-cc-
Confidence 9999999999999999999 699999999999998 899999999999999999999988654 899987532110 00
Q ss_pred CCCCCCCceEEEEEccCCCCCCCC-------CC-CCCCCCCCCCCcc----CceeeEEeeeecccCCCCcceEEEccccc
Q 008840 370 PVNDANGKVMKFIILKNRETDPWR-------VP-EKLIEYPSADLSA----ASTTRYIAMYEYTSNTGKPTHLLINAKTL 437 (551)
Q Consensus 370 ~~~~~~~~vm~f~v~~~~~~~~~~-------lP-~~L~~~~~~~~~~----~~~~r~~~l~~~~~~~g~~~~~~INg~~f 437 (551)
........++ ++.+....++.. ++ ..|.++...+.+. ..+.+.+.+... ..+....|+|||++|
T Consensus 296 ~~~~~~~ail--~y~~~~~~~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~--~~~~~~~~~iNg~~~ 371 (521)
T 1v10_A 296 FTGGINSAIF--RYQGAAVAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADINLNLRIG--RNATTADFTINGAPF 371 (521)
T ss_dssp CGGGTTEEEE--EETTCCSCCCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEE--CCSSSSCCEESSCCC
T ss_pred CCCCceeEEE--EECCCCCCCCCCCCCcccccchhhcccCCcccCCCcccCCcceEEEEEEEe--cCCceeEEEECCCcc
Confidence 0001112344 444322111111 11 1244432211111 123344443321 122223699999999
Q ss_pred CCCCCC------------------Cc----c--eeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcC
Q 008840 438 EDPVTE------------------TP----K--TLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWK 493 (551)
Q Consensus 438 ~~~~~~------------------~~----~--~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wk 493 (551)
..+... .. + .+.++.+.| .+.|+||+|+|. |.+... +|. ......++.||
T Consensus 372 ~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~--F~Vl~~-~~~-~~~n~~~p~~r 445 (521)
T 1v10_A 372 IPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHN--FDVVRT-PGS-SVYNYVNPVRR 445 (521)
T ss_dssp CCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCC--EEEEEC-TTC-SCCCCSSCCEE
T ss_pred cCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccce--EEEEec-CCC-CccccCCCCee
Confidence 864321 00 0 033344566 778999999995 456553 332 22234567999
Q ss_pred ccEEe-CCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 494 NVYKI-TPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 494 DTV~v-~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
|||.| +||++++|+|+++ ||| |||||||++|||.|||.+|.|-
T Consensus 446 DTV~V~p~gg~v~Irf~aD--------------NPG~W~~HCHi~~H~~~GM~~~~~v~ 490 (521)
T 1v10_A 446 DVVSIGGGGDNVTFRFVTD--------------NPGPWFLHCHIDWHLEAGLAVVFAED 490 (521)
T ss_dssp SEEECCBSSCEEEEEEECC--------------SCEEEEEEESCHHHHTTTCEEEEEES
T ss_pred eeEEeCCCCcEEEEEEEeC--------------CCeeEEEeeChHHHHhCCCeEEEEEC
Confidence 99999 8999999988876 889 9999999999999999999873
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-72 Score=618.05 Aligned_cols=417 Identities=17% Similarity=0.156 Sum_probs=306.4
Q ss_pred eEEEEEEEEEEeecCCC-CCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCC-CCCCCCCCCCCCCCCCCCCCCC
Q 008840 65 KLEIGMFEKKWKFHRDL-PPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLP-PNHILPIDPTIPTAMPSNKKGV 142 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~-~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~-~~~~~~~~~~~~~~~~~~~~~~ 142 (551)
++++.+... .+.++. ..+.+|+|| |++|||+||+++||+|+|+++|+|+ +
T Consensus 4 ~~~~~v~~~--~~~pdG~~~~~~~~~N-----g~~PGP~i~~~~Gd~v~v~v~N~l~~~--------------------- 55 (534)
T 1zpu_A 4 TFNWTTGWD--YRNVDGLKSRPVITCN-----GQFPWPDITVNKGDRVQIYLTNGMNNT--------------------- 55 (534)
T ss_dssp EEEEEEEEE--EECSSSSCCEEEEEET-----TBSSCCCEEEETTCEEEEEEECCCSSC---------------------
T ss_pred EEEEEEEEE--EecCCCCceEEEEEEC-----CccCCccEEEECCCEEEEEEEeCCCCC---------------------
Confidence 556655554 456666 689999998 9999999999999999999999998 5
Q ss_pred CeEEeeCCCCCCC--CCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 143 PTVVHLHGGIDEP--ESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 143 ~t~iH~HG~~~~~--~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|+|||||+++.. .+||+|+ ++||+|.||++| +|+|++++++||||||||.++ |+++||+|+|||++++
T Consensus 56 ~tsiHwHG~~~~~~~~~DG~~~--vtq~pI~PG~~~---~Y~f~~~~~~GT~wYH~H~~~----q~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 56 NTSMHFHGLFQNGTASMDGVPF--LTQCPIAPGSTM---LYNFTVDYNVGTYWYHSHTDG----QYEDGMKGLFIIKDDS 126 (534)
T ss_dssp CBCCEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECSSCCEEEEEECCSSS----GGGGTCEEEEEEECTT
T ss_pred CeeEEcCCcccCCCCcccCCCc--cccCCcCCCCeE---EEEEEeCccceeEEEEEcCcc----cccCcceeeEEeCCCC
Confidence 8999999999864 5999998 899999999999 999999889999999999963 8999999999999765
Q ss_pred CCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCC-CCCCCCCCCCCccCCceEEECCcccCceeecC-eEEEEEEEec
Q 008840 221 VEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTG-NNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRR-RKYRFRIINA 298 (551)
Q Consensus 221 ~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g-~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~-~~~RlRllNa 298 (551)
+ ++ .+++|++|+|+||+++.++++...... .++. ..+..++.++|||+.+|.++|++ ++|||||||+
T Consensus 127 -~-p~----~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~-----g~~~~~d~~liNG~~~~~~~v~~g~~~RlRliNa 195 (534)
T 1zpu_A 127 -F-PY----DYDEELSLSLSEWYHDLVTDLTKSFMSVYNPT-----GAEPIPQNLIVNNTMNLTWEVQPDTTYLLRIVNV 195 (534)
T ss_dssp -C-CS----CCSEEEEEEEEEECSSCHHHHHHHHSSTTCTT-----CCCCCCSEEEETTBSSCEEECCSSCEEEEEEEEC
T ss_pred -C-CC----CCcceEEEEeeccccCCHHHHHHHHhccccCC-----CCCCCCceEEECCCCceEEEEECCCEEEEEEEec
Confidence 2 22 247899999999988877665322110 0000 11345899999999999999998 7999999999
Q ss_pred CCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCce
Q 008840 299 SNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKV 378 (551)
Q Consensus 299 s~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~v 378 (551)
|+.+.+.|+| +||+|+||++||+++ +|+.++.|.|+|||||||+|++++.++++|+|++..........+........
T Consensus 196 ~~~~~~~~~i-~gh~~~vi~~DG~~~-~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ 273 (534)
T 1zpu_A 196 GGFVSQYFWI-EDHEMTVVEIDGITT-EKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNAT 273 (534)
T ss_dssp CSSCCEEEEE-TTBCEEEEEETTEEE-EEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEE
T ss_pred cCCceEEEEE-cCCeeEEEeccCcCc-cccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceE
Confidence 9999999999 699999999999999 89999999999999999999999766568999875422100000111111122
Q ss_pred EEEEEccCCC-CCC---CCCCC-----CCCCCCCCCC-ccCceeeEEeeeecccC-CCCcceEEEcccccCCCCCC----
Q 008840 379 MKFIILKNRE-TDP---WRVPE-----KLIEYPSADL-SAASTTRYIAMYEYTSN-TGKPTHLLINAKTLEDPVTE---- 443 (551)
Q Consensus 379 m~f~v~~~~~-~~~---~~lP~-----~L~~~~~~~~-~~~~~~r~~~l~~~~~~-~g~~~~~~INg~~f~~~~~~---- 443 (551)
..+++.+... ..+ ..++. .|.|++..+. ..+ .|++.|...... ......|+|||++|..+...
T Consensus 274 ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~ 351 (534)
T 1zpu_A 274 SYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEP--DHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMT 351 (534)
T ss_dssp EEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSC--SEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHH
T ss_pred EEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCC--CeEEEEEEEeeccCCceeEEEECCCcccCCCCCceee
Confidence 3344433221 011 11221 2333332222 223 344444322111 11234689999999764220
Q ss_pred -----------------C-c-----ceeeeEEEEeeeeeeeeeccccCceeeeeeeecc-------CCccC-------CC
Q 008840 444 -----------------T-P-----KTLDQTELVNLEEFKACMNKINDAIKCNLSKHAC-------GKKQA-------VP 486 (551)
Q Consensus 444 -----------------~-~-----~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~-------G~~~~-------~~ 486 (551)
+ + ..+++|.|.|.+.+.|+||+|+|.| .+..... |.+.. ..
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F--~Vl~~~~~~~~~~~G~p~~~~~~~~~~~ 429 (534)
T 1zpu_A 352 VLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAF--QTIQRDRTYDDALGEVPHSFDPDNHPAF 429 (534)
T ss_dssp HTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCE--EEEEECCCCCGGGTCCCCCCBTTBCCCC
T ss_pred ecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCce--EEEeecCCccccccCcccccCccccccc
Confidence 0 0 1278899999988999999999955 5554322 21000 11
Q ss_pred CcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 487 VHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 487 ~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
..++.|||||.|+|+++++|+|+++ ||| |||||||++|+|.|||.+|.+
T Consensus 430 ~~~p~~RDTv~V~pgg~v~IrF~aD--------------NPG~W~~HCHi~~H~~~GM~~~~~~ 479 (534)
T 1zpu_A 430 PEYPMRRDTLYVRPQSNFVIRFKAD--------------NPGVWFFHCHIEWHLLQGLGLVLVE 479 (534)
T ss_dssp CSSCEEESEEEECTTCEEEEEEECC--------------SCEEEEEEECCHHHHHTTCEEEEEE
T ss_pred cCCCCeeeEEEeCCCCEEEEEEEeC--------------CCeeEEEEeCchhHhhcCCeEEEEE
Confidence 2357899999999999999988876 889 999999999999999999976
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-72 Score=609.34 Aligned_cols=411 Identities=17% Similarity=0.204 Sum_probs=295.2
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+.+.. +.++...+.+|+|| |++ |||||+++||+|+|+++|+|+.. ....+|
T Consensus 6 ~~~l~i~~~~--~~~~g~~~~~~~~N-----G~~-GP~i~~~~Gd~v~v~v~N~l~~~----------------~~~~~t 61 (503)
T 1hfu_A 6 VDTMTLTNAN--VSPDGFTRAGILVN-----GVH-GPLIRGGKNDNFELNVVNDLDNP----------------TMLRPT 61 (503)
T ss_dssp EEEEEEEEEE--ECTTSCCEEEEEET-----TBS-SCEEEEETTCCEEEEEEECCCCT----------------TSCCSB
T ss_pred eEEEEEEEEE--ECCCCeEEEEEEEC-----Ccc-CCcEEEeCCCEEEEEEEeCCCCc----------------cCCCcc
Confidence 4566665654 44555578999998 999 99999999999999999999831 001289
Q ss_pred EEeeCCCCCC--CCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCC
Q 008840 145 VVHLHGGIDE--PESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVE 222 (551)
Q Consensus 145 ~iH~HG~~~~--~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~ 222 (551)
+|||||+++. +.+||+|+ ++||+|.||++| +|+|++.+++||||||||.+ .|+++||+|+|||++++ +
T Consensus 62 siHwHG~~~~~~~~~DGv~~--vtq~~I~PG~~~---~Y~f~~~~~~GT~wYH~H~~----~q~~~Gl~G~liV~~~~-~ 131 (503)
T 1hfu_A 62 SIHWHGLFQRGTNWADGADG--VNQCPISPGHAF---LYKFTPAGHAGTFWYHSHFG----TQYCDGLRGPMVIYDDN-D 131 (503)
T ss_dssp CEEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEECCTTCCEEEEEEECST----TGGGGTCEEEEEEECTT-C
T ss_pred cEeccceeccCCCccCCCcc--cccCCcCCCCeE---EEEEEeCCCCccEEEEecch----hhhhCcceeeEEEcCCC-C
Confidence 9999999994 45999998 799999999999 99999667999999999985 49999999999999765 2
Q ss_pred CCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---------CceeecC-eEE
Q 008840 223 APLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---------PRMTVRR-RKY 291 (551)
Q Consensus 223 ~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---------P~~~v~~-~~~ 291 (551)
+...+.+. ++|++|+|+||+++.++++.. . ..+|.++|||+.+ |.++|++ ++|
T Consensus 132 -~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~----~-----------~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~ 195 (503)
T 1hfu_A 132 -PHAALYDEDDENTIITLADWYHIPAPSIQG----A-----------AQPDATLINGKGRYVGGPAAELSIVNVEQGKKY 195 (503)
T ss_dssp -TTGGGCSBCSTTSEEEEEEECSSCGGGCC------------------CCSEEEETTBCCBTTCCCCCCCEEEECTTCEE
T ss_pred -CcccCCCCCCceEEEEEcccccCChHHhcC----C-----------CCCCEEEECcccccCCCCCCcceEEEEcCCCEE
Confidence 22222221 358999999999887776420 0 2378999999987 8999998 799
Q ss_pred EEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCC--C
Q 008840 292 RFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAG--N 369 (551)
Q Consensus 292 RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g--~ 369 (551)
||||||+|+.+.+.|+| +||+|+||+.||+++ +|+.+++|.|+|||||||+|++++.+| +|+|++......... .
T Consensus 196 RlRliN~~~~~~~~~~i-~gh~~~vi~~DG~~~-~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~ 272 (503)
T 1hfu_A 196 RMRLISLSCDPNWQFSI-DGHELTIIEVDGELT-EPHTVDRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGT 272 (503)
T ss_dssp EEEEEECCSSCCEEEEE-TTCCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGC
T ss_pred EEEEEecCCcccEEEEE-cCceEEEEeccCccc-cccccCeEEEcccceEEEEEEcCCCcc-ceeeeeccccCCcccccc
Confidence 99999999999999999 699999999999998 899999999999999999999998654 799987532110000 0
Q ss_pred CCCCCCCceEEEEEccCCCCCCCCCCC-------CCCCCCCCCCcc----CceeeEEeeeecccCCCCcceEEEcccccC
Q 008840 370 PVNDANGKVMKFIILKNRETDPWRVPE-------KLIEYPSADLSA----ASTTRYIAMYEYTSNTGKPTHLLINAKTLE 438 (551)
Q Consensus 370 ~~~~~~~~vm~f~v~~~~~~~~~~lP~-------~L~~~~~~~~~~----~~~~r~~~l~~~~~~~g~~~~~~INg~~f~ 438 (551)
........+|++.............|. .|.++...+.+. ..+.+.+.+.... .+ ..|+|||++|.
T Consensus 273 ~~~~~~~ail~y~~~~~~~p~~~~~~~~~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--~~--~~~~iNg~~~~ 348 (503)
T 1hfu_A 273 FANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDPAAPGIPTPGAADVNLRFQLGF--SG--GRFTINGTAYE 348 (503)
T ss_dssp CGGGTTEEEEEETTSCSSCCCCCCCSSCCBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEE--ET--TEEEETTBCCC
T ss_pred cCCCceEEEEEECCCCCCCCCCCCCCccCCCccccccccCccCCCCcccCCcceEEEEEEeec--cC--ceEEECCCccC
Confidence 011112245444322111111111221 233432211111 1223344332111 11 26999999998
Q ss_pred CCCCC------------------C-----cc-eeeeEEEE-eeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcC
Q 008840 439 DPVTE------------------T-----PK-TLDQTELV-NLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWK 493 (551)
Q Consensus 439 ~~~~~------------------~-----~~-~~~~~~l~-n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wk 493 (551)
.+... . +. .+.++.+. |...+.|+||+|+|.| .+... +|. ......++.||
T Consensus 349 ~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F--~Vl~~-~~~-~~~n~~~p~~r 424 (503)
T 1hfu_A 349 SPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAF--SVVRS-AGS-STYNFVNPVKR 424 (503)
T ss_dssp CCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCE--EEEEC-TTC-CCCCCSSBCEE
T ss_pred CCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceE--EEEec-CCC-CccccCCCCee
Confidence 65321 0 00 02233344 4456789999999954 56553 332 22234578999
Q ss_pred ccEEe-CCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 494 NVYKI-TPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 494 DTV~v-~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
|||.| +||++++|+|+++ ||| ||||||||+|||.|||.+|.|.
T Consensus 425 DTV~V~ppg~~v~irf~ad--------------nPG~W~~HCHil~H~~~GM~~~~~v~ 469 (503)
T 1hfu_A 425 DVVSLGVTGDEVTIRFVTD--------------NPGPWFFHCHIEFHLMNGLAIVFAED 469 (503)
T ss_dssp SEEECCSTTCEEEEEEECC--------------SCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred eeEEecCCCceEEEEEEcC--------------CCeeeeEecCchhHhhCCCeEEEEEC
Confidence 99999 8999999988876 889 9999999999999999999873
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-71 Score=607.33 Aligned_cols=411 Identities=18% Similarity=0.180 Sum_probs=298.0
Q ss_pred eeEEEEEEEEEEeecCCCCC-ccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPP-TPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGV 142 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~-~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~ 142 (551)
.++++.+.+.+.++.++.-. +.+|+|| |++||||||+++||+|+|+|+|+|+..
T Consensus 34 ~~~~l~~~~~~~~~~~~g~~~~~~~~~N-----g~~PGP~i~~~~GD~v~v~v~N~l~~~-------------------- 88 (559)
T 2q9o_A 34 QSYVFNLTEVDNWMGPDGVVKEKVMLIN-----GNIMGPNIVANWGDTVEVTVINNLVTN-------------------- 88 (559)
T ss_dssp EEEEEEEEEEEEEECTTSCEEEEEEEET-----TBSSCCCEEEETTCEEEEEEEEECSSC--------------------
T ss_pred EEEEEEEEEeEeeECCCCccceEEEEEC-----CcccCCcEEEeCCCEEEEEEEeCCCCC--------------------
Confidence 35777777877666655445 7899998 999999999999999999999999532
Q ss_pred CeEEeeCCCCCCC--CCCCCCCcceeccccCC-CCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCC
Q 008840 143 PTVVHLHGGIDEP--ESDGYAKSWFTAGFEEK-GPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP 219 (551)
Q Consensus 143 ~t~iH~HG~~~~~--~~DG~p~~~~t~~~i~p-G~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp 219 (551)
+|+|||||+++.+ .+||+|+ ++||+|.| |++| +|+|+++ ++||||||||.. .|+++||+|+|||+++
T Consensus 89 ~tsiHwHG~~~~~~~~~DG~~~--~tq~~I~P~G~~~---~Y~f~~~-q~GT~wYH~H~~----~q~~~Gl~G~liV~~~ 158 (559)
T 2q9o_A 89 GTSIHWHGIXQKDTNLHDGANG--VTECPIPPKGGQR---TYRWRAR-QYGTSWYHSHFS----AQYGNGVVGTIQINGP 158 (559)
T ss_dssp CBCEEEETCCCTTCGGGSCCBT--TTBCCBCTTTEEE---EEEEECC-SCEEEEEEECST----TGGGGTCEEEEEEECC
T ss_pred CceEEcCCCccCCCCCcCCCCc--cccCccCCCCCeE---EEEEECC-CCEEEEEEEccc----chhcCCceEEEEecCC
Confidence 7999999999954 5999998 89999999 9999 9999996 799999999983 5999999999999976
Q ss_pred CCCCCCCCCCCCcCce-eEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---------CceeecC-
Q 008840 220 DVEAPLRLPSGDVFDR-PLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---------PRMTVRR- 288 (551)
Q Consensus 220 ~~~~~~~lP~~~~~e~-~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---------P~~~v~~- 288 (551)
+ .. .++.|. +|+|+||+++.++++.+..... .+..++.++|||+.. +.++|++
T Consensus 159 ~-~~------~~d~d~~~l~l~Dw~~~~~~~~~~~~~~~---------~~~~~d~~liNG~~~~~~~~~g~~~~~~v~~g 222 (559)
T 2q9o_A 159 A-SL------PYDIDLGVFPITDYYYRAADDLVHFTQNN---------APPFSDNVLINGTAVNPNTGEGQYANVTLTPG 222 (559)
T ss_dssp C-SS------CCSEEEEEEEEEEECSSCHHHHHHHHTTS---------CCCCBSEEEETTBCBCTTTCCBCCCEEEECTT
T ss_pred C-cC------CCcccceEEEEeccccCCHHHHhhhhhcC---------CCCccceeEECCccccCcCCCCCceEEEEcCC
Confidence 5 22 136676 9999999988777654321110 123478999999984 4788987
Q ss_pred eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC--CCCCC
Q 008840 289 RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA--PYPYP 366 (551)
Q Consensus 289 ~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~--~~~~~ 366 (551)
++|||||||+|+.+.+.|+| +||+|+||++||.++ +|+.+++|.|+|||||||+|++++.+| +|+|+... ....
T Consensus 223 ~~~RlRliNa~~~~~~~~~i-~gh~~~vi~~DG~~~-~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~- 298 (559)
T 2q9o_A 223 KRHRLRILNTSTENHFQVSL-VNHTMTVIAADMVPV-NAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAAC- 298 (559)
T ss_dssp CEEEEEEEECCSSCCEEEEE-TTBCEEEEEETTEEE-EEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTT-
T ss_pred CEEEEEEEecCCCceEEEEE-CCCceEEEecCCccc-CceEeCeEEEccEEEEEEEEECCCCCC-cEEEEEEecccccc-
Confidence 89999999999999999999 699999999999999 799999999999999999999988654 89998764 1110
Q ss_pred CCCCCCCCCCceEEEEEccCCCCCCCCC--C---------CCCCCCCCCCCccC--c--eeeEEeeeecccCCCCcceEE
Q 008840 367 AGNPVNDANGKVMKFIILKNRETDPWRV--P---------EKLIEYPSADLSAA--S--TTRYIAMYEYTSNTGKPTHLL 431 (551)
Q Consensus 367 ~g~~~~~~~~~vm~f~v~~~~~~~~~~l--P---------~~L~~~~~~~~~~~--~--~~r~~~l~~~~~~~g~~~~~~ 431 (551)
+.... ......+++.+.....+... + ..|.|..+.+.+.. . ..+.+.+.... ..+....|+
T Consensus 299 -~~~~~--~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 374 (559)
T 2q9o_A 299 -GGSLN--PHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL-TGTPLFVWK 374 (559)
T ss_dssp -CCBSS--SCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-SSSSSCEEE
T ss_pred -CCCCC--CceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCcccccceeEEEEEEeec-CCCceEEEE
Confidence 11111 11233444443321111111 1 12233222111111 1 12334333211 112245799
Q ss_pred EcccccCCCC-CC--------------------Cc--ceeeeEEEEeee----eeeeeeccccCceeeeeeeecc-----
Q 008840 432 INAKTLEDPV-TE--------------------TP--KTLDQTELVNLE----EFKACMNKINDAIKCNLSKHAC----- 479 (551)
Q Consensus 432 INg~~f~~~~-~~--------------------~~--~~~~~~~l~n~~----~~~~~~~~~~~~~~~~v~~~~~----- 479 (551)
|||++|..+. .. .+ ..++.|.+.|.. .+.|+||+|+|.| .+.....
T Consensus 375 iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F--~Vl~~g~~~~~~ 452 (559)
T 2q9o_A 375 VNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDF--LVLGRSPDVPAA 452 (559)
T ss_dssp ETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCE--EEEEESCCCCTT
T ss_pred ECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCce--EEEecccccccc
Confidence 9999996431 11 00 125667777755 6899999999954 5554322
Q ss_pred ----CCc------cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceE
Q 008840 480 ----GKK------QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLK 548 (551)
Q Consensus 480 ----G~~------~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~ 548 (551)
|.- ......++.|||||.|+++++++|+|+++ ||| ||||||||+|||.|||.+|.
T Consensus 453 ~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad--------------NPG~W~~HCHil~H~~~GM~~~~~ 518 (559)
T 2q9o_A 453 SQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD--------------NPGAWLFHCHIAWHVSGGLSVDFL 518 (559)
T ss_dssp SCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC--------------SCEEEEEEECCHHHHHTTCEEEEE
T ss_pred cccccccCccccccccccCCCCccceEEccCCccEEEEEEcC--------------CCeeEEEEecchhHhhcCCeEEEE
Confidence 210 11223357899999999999999987766 889 99999999999999999997
Q ss_pred E
Q 008840 549 L 549 (551)
Q Consensus 549 V 549 (551)
|
T Consensus 519 v 519 (559)
T 2q9o_A 519 E 519 (559)
T ss_dssp E
T ss_pred E
Confidence 6
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-70 Score=600.26 Aligned_cols=415 Identities=20% Similarity=0.218 Sum_probs=298.0
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCC-CCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLP-PNHILPIDPTIPTAMPSNKKGV 142 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~-~~~~~~~~~~~~~~~~~~~~~~ 142 (551)
.++++.+.+. .+.++...+.+|+|| |++|||+||+++||+|+|+++|+|+ +
T Consensus 4 ~~y~~~v~~~--~~~~dg~~~~~~~~N-----g~~PGP~I~~~~GD~v~v~v~N~l~~~--------------------- 55 (552)
T 1aoz_A 4 RHYKWEVEYM--FWAPNCNENIVMGIN-----GQFPGPTIRANAGDSVVVELTNKLHTE--------------------- 55 (552)
T ss_dssp EEEEEEEEEE--EECTTSSCEEEEEET-----TBSSCCCEEEETTCEEEEEEEECCSSC---------------------
T ss_pred EEEEEEEEEE--EEcCCCceEEEEEEC-----CccCCCcEEEeCCCEEEEEEEeCCCCC---------------------
Confidence 3566666555 355666678999998 9999999999999999999999998 5
Q ss_pred CeEEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 143 PTVVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 143 ~t~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|+|||||+++.+. +||+|+ ++||+|.||++| +|+|++ +++||||||||.. .|+++||+|+|||++++
T Consensus 56 ~tsiHwHGl~~~~~~~~DGv~~--vtq~~I~PG~s~---tY~f~~-~~~GT~wYHsH~~----~q~~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 56 GVVIHWHGILQRGTPWADGTAS--ISQCAINPGETF---FYNFTV-DNPGTFFYHGHLG----MQRSAGLYGSLIVDPPQ 125 (552)
T ss_dssp CBCEEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEEC-CSCEEEEEEECST----TTGGGTCEEEEEEECCT
T ss_pred CeeEEeCCCccCCCcccCCCcc--cccCCcCCCCeE---EEEEEC-CCCEEEEEEECch----hHHhccCeeeEEEeCCc
Confidence 89999999999877 999999 899999999999 999999 5999999999983 58999999999999765
Q ss_pred CCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC------------------
Q 008840 221 VEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP------------------ 282 (551)
Q Consensus 221 ~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P------------------ 282 (551)
+....++ +++|++|+|+||++....++...... .+ ..|. ..++.++|||+..+
T Consensus 126 -~~~~~~~--~d~e~~l~l~Dw~~~~~~~~~~~~~~-~~---~~~~--~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~ 196 (552)
T 1aoz_A 126 -GKKEPFH--YDGEINLLLSDWWHQSIHKQEVGLSS-KP---IRWI--GEPQTILLNGRGQFDCSIAAKYDSNLEPCKLK 196 (552)
T ss_dssp -TCCCSSC--CSEEEEEEEEEECSSCHHHHHHHTTS-SS---CCCC--CSCSEEEETTBCCSSSBTTGGGCTTSCBCCCC
T ss_pred -ccCCCCC--CCccceEEeecccCCCHHHHHhhhhc-cc---ccCC--CCCCeEEECCccccCcccCccccccccccccc
Confidence 3222223 36899999999966543333211110 00 0111 13678999999866
Q ss_pred --------ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCc
Q 008840 283 --------RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSD 353 (551)
Q Consensus 283 --------~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~ 353 (551)
.++|++ ++|||||||+|..+.+.|+| +||+|+||++||+++ +|+.+++|.|+|||||||+|++++.+.+
T Consensus 197 ~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i-~gh~~~vi~~DG~~~-~P~~~~~l~i~pgqR~dvlv~~~~~~~g 274 (552)
T 1aoz_A 197 GSESCAPYIFHVSPKKTYRIRIASTTALAALNFAI-GNHQLLVVEADGNYV-QPFYTSDIDIYSGESYSVLITTDQNPSE 274 (552)
T ss_dssp SCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEE-TTCCEEEEEETTEEE-EEEEESCEEECTTCEEEEEEECCSCTTC
T ss_pred CCCCCCceEEEEcCCCEEEEEEEcccccceEEEEE-cCcEEEEEEECCccc-CceEEeEEEEcCCcEEEEEEEcCCCCCC
Confidence 688988 89999999999999999999 699999999999999 8999999999999999999999543334
Q ss_pred eEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCC-CC-CCCCCCC-------------CCCCCC--CCCccCceeeEEe
Q 008840 354 VAILANDAPYPYPAGNPVNDANGKVMKFIILKNRE-TD-PWRVPEK-------------LIEYPS--ADLSAASTTRYIA 416 (551)
Q Consensus 354 ~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~-~~-~~~lP~~-------------L~~~~~--~~~~~~~~~r~~~ 416 (551)
+|+|+...... .+ .....+..+++.+... .. ....|.. |.++.. .........|++.
T Consensus 275 ~y~i~~~~~~~--~~----~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 348 (552)
T 1aoz_A 275 NYWVSVGTRAR--HP----NTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIF 348 (552)
T ss_dssp CEEEEEEEESS--CC----CSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEE
T ss_pred CEEEEEEcccC--CC----CCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEE
Confidence 89988753210 00 0112344455544321 11 1111210 112110 1111122345554
Q ss_pred eeecccCCCCcceEEEcccccCCCCCC------------------------------C----------------cceeee
Q 008840 417 MYEYTSNTGKPTHLLINAKTLEDPVTE------------------------------T----------------PKTLDQ 450 (551)
Q Consensus 417 l~~~~~~~g~~~~~~INg~~f~~~~~~------------------------------~----------------~~~~~~ 450 (551)
+............|+|||++|..+... . ...+++
T Consensus 349 l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ 428 (552)
T 1aoz_A 349 LLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVD 428 (552)
T ss_dssp EEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEE
T ss_pred EEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEE
Confidence 432211111234699999988542100 0 011678
Q ss_pred EEEEeeee------eeeeeccccCceeeeeeeeccCCc-----cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCC
Q 008840 451 TELVNLEE------FKACMNKINDAIKCNLSKHACGKK-----QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASY 519 (551)
Q Consensus 451 ~~l~n~~~------~~~~~~~~~~~~~~~v~~~~~G~~-----~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~ 519 (551)
|.+.|.+. ..|+||+|+|.| .+.....|.- ......++.|||||.|+|+++++|+|+++
T Consensus 429 ivi~N~~~~~~~~~~~HP~HLHGh~F--~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-------- 498 (552)
T 1aoz_A 429 VILQNANMMKENLSETHPWHLHGHDF--WVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-------- 498 (552)
T ss_dssp EEEEECCCSSTTCCCCEEEEETTCCE--EEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC--------
T ss_pred EEEeCCcccccccCCCCCEEEcCCce--EEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC--------
Confidence 89998874 459999999954 5555434431 11123467899999999999999988877
Q ss_pred CCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 520 PFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 520 p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
||| |||||||++|++.|||..|.+
T Consensus 499 ------NPG~W~~HCHi~~H~~~GM~~~~~~ 523 (552)
T 1aoz_A 499 ------NPGVWAFHCHIEPHLHMGMGVVFAE 523 (552)
T ss_dssp ------SCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred ------CCeEEEEEeeehhHhhCCCeEEEEe
Confidence 889 999999999999999999976
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-67 Score=576.95 Aligned_cols=406 Identities=19% Similarity=0.216 Sum_probs=296.4
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+.+. .++.-...+|+|| |++|||+||+++||+|+|+++|+|+.. +
T Consensus 68 ~~~~l~v~~~~~--~pdG~~~~~~~~N-----G~~PGP~I~~~~GD~v~V~v~N~l~~~--------------------~ 120 (580)
T 3sqr_A 68 REYWLSVENSTI--TPDGYTRSAMTFN-----GTVPGPAIIADWGDNLIIHVTNNLEHN--------------------G 120 (580)
T ss_dssp EEEEEEEEEEEE--CSSSBCEEEEEET-----TBSSCCCEEEETTCEEEEEEEECCSSC--------------------C
T ss_pred EEEEEEEEEEEe--cCCCeEEEEEEEC-----CccCCceEEEeCCCEEEEEEEECCCCC--------------------c
Confidence 356766667653 4444478899998 999999999999999999999999832 7
Q ss_pred eEEeeCCCCCCC--CCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCC
Q 008840 144 TVVHLHGGIDEP--ESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDV 221 (551)
Q Consensus 144 t~iH~HG~~~~~--~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~ 221 (551)
|+|||||+++.. .+||+|+ ++||+|+||++| +|+|+++ ++||||||+|.. .|+++||+|+|||++++
T Consensus 121 tsIHwHGl~~~~t~~~DGvp~--vTq~pI~PG~sf---tY~f~~~-q~GT~WYHsH~~----~q~~~GL~G~lIV~~p~- 189 (580)
T 3sqr_A 121 TSIHWHGIRQLGSLEYDGVPG--VTQCPIAPGDTL---TYKFQVT-QYGTTWYHSHFS----LQYGDGLFGPLIINGPA- 189 (580)
T ss_dssp BCEEETTCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECC-CCEEEEEEECST----TGGGGTCEEEEEEECCC-
T ss_pred ceEEecccccCCCccccCCCc--cccCCCCCCCeE---EEEEECC-CCcceEEeeccc----ccccCcCEEEEEeeCcc-
Confidence 999999999974 5999999 899999999999 9999996 899999999983 58999999999999766
Q ss_pred CCCCCCCCCCcCce-eEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc-----------------Cc
Q 008840 222 EAPLRLPSGDVFDR-PLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW-----------------PR 283 (551)
Q Consensus 222 ~~~~~lP~~~~~e~-~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~-----------------P~ 283 (551)
+.. ++.|. +|+|+||+++..+++....... ....+|.++|||+.. +.
T Consensus 190 ~~~------yD~d~~~l~l~Dw~~~~~~~~~~~~~~~---------~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~ 254 (580)
T 3sqr_A 190 TAD------YDEDVGVIFLQDWAHESVFEIWDTARLG---------APPALENTLMNGTNTFDCSASTDPNCVGGGKKFE 254 (580)
T ss_dssp SSC------CSEEEEEEEEEEECSSCHHHHHHHHTTS---------CCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCE
T ss_pred cCC------CCccceEEEEEEEecCCHHHHHHHHhcc---------CCCCCceEEECCcccCCCccccccccccCCCcee
Confidence 321 36676 9999999877655543221100 123478999999964 56
Q ss_pred eeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCC
Q 008840 284 MTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAP 362 (551)
Q Consensus 284 ~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~ 362 (551)
++|++ ++|||||||+|..+.+.|+| +||+|+||++||.++ +|+.+++|.|+|||||||+|++++.+ ++|+|+....
T Consensus 255 ~~v~~G~~yRlRlINa~~~~~~~~~i-~gh~~~VIa~DG~~v-~P~~~~~l~i~pGqRydVlv~a~~~~-g~Y~i~a~~~ 331 (580)
T 3sqr_A 255 LTFVEGTKYRLRLINVGIDSHFEFAI-DNHTLTVIANDLVPI-VPYTTDTLLIGIGQRYDVIVEANAAA-DNYWIRGNWG 331 (580)
T ss_dssp EECCTTCEEEEEEEECCSSCCEEEEE-TTCCEEEEEETTEEE-EEEEESSEEECTTCEEEEEEECCSCS-SEEEEECCCC
T ss_pred EEEcCCCEEEEEEEeccCCceeeEEe-CCceEEEEEeCCccC-CceEeeEEEEccceEEEEEEEeCCCC-CeEEEEEecc
Confidence 78888 89999999999999999999 699999999999999 79999999999999999999999875 4999998653
Q ss_pred CCCCCCCCCCCCCCceEEEEEccCCCCCCCCCC------------CCCCCCCCCCCc-cCceeeEEeeeecccCCCCcce
Q 008840 363 YPYPAGNPVNDANGKVMKFIILKNRETDPWRVP------------EKLIEYPSADLS-AASTTRYIAMYEYTSNTGKPTH 429 (551)
Q Consensus 363 ~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP------------~~L~~~~~~~~~-~~~~~r~~~l~~~~~~~g~~~~ 429 (551)
... ............+++.+.....+...| ..|.|+.+...+ .+..++.+.+. .+....
T Consensus 332 ~~~---~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~~-----~~~~~~ 403 (580)
T 3sqr_A 332 TTC---STNNEAANATGILRYDSSSIANPTSVGTTPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSA-----FTNYFT 403 (580)
T ss_dssp TTT---SCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCCSCCSCGGGCCBSSCCBCCSEEEEEEEEEEE-----ESSSEE
T ss_pred ccc---CccCCCCceEEEEEECCCCCCCCCCCCCCccchhhcccccccccCCCCCCCCccceEEEEEec-----cCCcee
Confidence 211 010111112334455443211111111 133333322111 22334444442 123456
Q ss_pred EEEcccccCCC-CCC--------------------Cc-----ceeeeEEEEeee--eeeeeeccccCceeeeeeeeccCC
Q 008840 430 LLINAKTLEDP-VTE--------------------TP-----KTLDQTELVNLE--EFKACMNKINDAIKCNLSKHACGK 481 (551)
Q Consensus 430 ~~INg~~f~~~-~~~--------------------~~-----~~~~~~~l~n~~--~~~~~~~~~~~~~~~~v~~~~~G~ 481 (551)
|.|||.+|..+ ..+ .+ ..++++.+.|.. ...|+||+|+|.| .+.....|.
T Consensus 404 w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F--~vv~~g~G~ 481 (580)
T 3sqr_A 404 WTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDF--FIVAQETDV 481 (580)
T ss_dssp EEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCE--EEEEEESSC
T ss_pred EEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccccceeeEecCceE--EEEecCCCc
Confidence 99999998531 111 01 124556666665 5689999999965 454433342
Q ss_pred c------cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 482 K------QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 482 ~------~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
- .......+.+||||.|+|++.+.|+|+++ ||| |+|||||++|++.|||..|.+
T Consensus 482 f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad--------------NPG~W~~HCHi~~H~~~Gm~~~~~e 542 (580)
T 3sqr_A 482 FNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD--------------NPGSWLLHCHIAWHASEGLAMQFVE 542 (580)
T ss_dssp CCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC--------------SCEEEEEEECSHHHHHTTCEEEEEE
T ss_pred cCccccccccccCCCceeeEEEeCCCceEEEEEEcC--------------CCeeeEEEECcHHHhhCCCcEEEEE
Confidence 1 11234457899999999999999988776 899 999999999999999999875
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-67 Score=565.73 Aligned_cols=409 Identities=17% Similarity=0.220 Sum_probs=290.9
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+.+.. +.++.-...+|+|| |++|||+||+++||+|+|+++|+|++.. ...+|
T Consensus 6 ~~~l~i~~~~--~~pdg~~~~~~~~N-----G~~PGP~I~~~~GD~v~v~v~N~l~~~~----------------~~~~t 62 (495)
T 3t6v_A 6 VTDLHIVNAD--IVPDGFVRPAVNAG-----GTFPGPVIAGNVGDNFQIVTFNQLIECS----------------MLVDT 62 (495)
T ss_dssp EEEEEEEEEE--ECTTSCCEEEEEET-----TSSSCCEEEEETTCEEEEEEEECCCCGG----------------GCSCB
T ss_pred eEEEEEEEEE--EcCCCceEEEEEEC-----CcccCCeEEEECCcEEEEEEEECCCCcc----------------CCCce
Confidence 3455555553 44544467899997 9999999999999999999999998510 01269
Q ss_pred EEeeCCCCCCC--CCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCC
Q 008840 145 VVHLHGGIDEP--ESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVE 222 (551)
Q Consensus 145 ~iH~HG~~~~~--~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~ 222 (551)
+|||||+++.. .+||+|+ +|||+|+||++| +|+|++.+++||||||||.. .|+++||+|+|||++++ +
T Consensus 63 siHwHGl~~~~~~~~DGv~~--vtq~pI~PG~sf---tY~f~~~~~~GT~wYHsH~~----~q~~~GL~G~lIV~~~~-~ 132 (495)
T 3t6v_A 63 SIHWHGEFQKGTNWADGPAF--ITQCPIIVGNSF---SYNFNVPGMAGTYWYHSHLT----TQYCDGLRGPFVVYDPN-D 132 (495)
T ss_dssp CEEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECTTCCEEEEEEECST----TGGGGTCEEEEEEECTT-C
T ss_pred EEEeCCcccCCCccccCCCc--cccCCCCCCCeE---EEEEEeCCCCceeeeeccch----hHHhcCceEEEEEcCcc-c
Confidence 99999999864 5999998 899999999999 99999977999999999994 48999999999999776 2
Q ss_pred CCCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcc----------cCceeecC-eE
Q 008840 223 APLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA----------WPRMTVRR-RK 290 (551)
Q Consensus 223 ~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~----------~P~~~v~~-~~ 290 (551)
+...+... +.|++|+|+||+++.++++. +. ....+|.++|||+. ++.++|++ ++
T Consensus 133 -~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~----~~---------~p~~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~ 198 (495)
T 3t6v_A 133 -PDANLYDVDDDTTIITLADWYHVLAKEMG----AG---------GAITADSTLIDGLGRTHVNVAAVPLSVITVEVGKR 198 (495)
T ss_dssp -TTGGGCSBCSGGGEEEEEEECSSCGGGSC----SS---------SCCCCSEEEETTBCCBSSSCCCCCCCEEEECTTCE
T ss_pred -cccccCCCCCceeEEEEecccCCchhhhc----cC---------CCCCCcEEEECCcCcCCCCcccCCceEEEEcCCCE
Confidence 11111111 45679999999876654421 10 01247899999984 46789998 89
Q ss_pred EEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCC
Q 008840 291 YRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNP 370 (551)
Q Consensus 291 ~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~ 370 (551)
|||||||+|+.+.+.|+| +||+|+||++||.++ +|+.+++|.|+|||||||+|++++..| +|+|+..... +..
T Consensus 199 ~RlRliN~~~~~~~~~~i-~gh~~~via~DG~~~-~P~~~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~----~~~ 271 (495)
T 3t6v_A 199 YRMRLVSISCDPNYDFSI-DGHDMTIIETDGVDS-QELTVDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNS----GGE 271 (495)
T ss_dssp EEEEEEECCSSCCEEEEE-TTCCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESS----SSC
T ss_pred EEEEEEecCCCeeEEEEE-CCCeEEEEEeCCccc-CCEEeeeEEEcCceEEEEEEECCCCCc-eEEEEEeccc----Ccc
Confidence 999999999999999999 699999999999998 899999999999999999999988654 8999875321 110
Q ss_pred CCCCCCceEEEEEccCCCCCC-CCCC---------CCCCCCCCCCCc----cCceeeEEeeeecccCCCCcceEEEcccc
Q 008840 371 VNDANGKVMKFIILKNRETDP-WRVP---------EKLIEYPSADLS----AASTTRYIAMYEYTSNTGKPTHLLINAKT 436 (551)
Q Consensus 371 ~~~~~~~vm~f~v~~~~~~~~-~~lP---------~~L~~~~~~~~~----~~~~~r~~~l~~~~~~~g~~~~~~INg~~ 436 (551)
..........+++.+.....+ ...+ ..|.++.....+ .....+.+.+.-... ...|+|||++
T Consensus 272 ~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~----~~~w~iNg~s 347 (495)
T 3t6v_A 272 GFDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGFA----CGNFVINGVS 347 (495)
T ss_dssp SCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEE----TTEEEETTBC
T ss_pred ccCCCceEEEEEECCCCCCCCCCCCCCCCccccccccccccccccCCCccCCCCCcEEEEEEEEec----CcEEEEcCEe
Confidence 000011234455554321111 1111 123333221111 011123333221111 1269999999
Q ss_pred cCCCCCC---------------Cc----c-----eeeeEEEE-eeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCC
Q 008840 437 LEDPVTE---------------TP----K-----TLDQTELV-NLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQG 491 (551)
Q Consensus 437 f~~~~~~---------------~~----~-----~~~~~~l~-n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~ 491 (551)
|..+... .+ . .++++.+. |.....|+||+|+|.| .+.. ..|. .......+.
T Consensus 348 ~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F--~vl~-~~g~-~~~n~~~P~ 423 (495)
T 3t6v_A 348 FTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDF--AVSE-SASN-STSNYDDPI 423 (495)
T ss_dssp CCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCE--EEEE-CTTC-CCCCSSSCC
T ss_pred cCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcE--EEEe-cCCC-CCcccCCCC
Confidence 9754221 00 0 14566666 5667889999999955 4543 3442 222334678
Q ss_pred cCccEEeCC-CcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 492 WKNVYKITP-GYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 492 wkDTV~v~p-g~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
|||||.|++ |+++.|+|+++ ||| |||||||++|++.|||..|.+
T Consensus 424 ~rDtv~v~~~g~~~~irf~ad--------------nPG~W~~HCHi~~H~~~Gm~~~~~e 469 (495)
T 3t6v_A 424 WRDVVSIGGVGDNVTIRFCTD--------------NPGPWFLHCHIDWHLDAGFAIVFAE 469 (495)
T ss_dssp EESEEECCSTTCEEEEEEECC--------------SCEEEEEEESCHHHHHTTCEEEEEE
T ss_pred CccEEEcCCCCcEEEEEEEcC--------------CCeeEEEEecchhHhhcCCeEEEEE
Confidence 999999997 99999977766 899 999999999999999998853
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-66 Score=560.46 Aligned_cols=407 Identities=17% Similarity=0.231 Sum_probs=290.7
Q ss_pred EEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeE
Q 008840 66 LEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTV 145 (551)
Q Consensus 66 ~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~ 145 (551)
+++.+.+. .+.++.-...+|+|| |++|||+||+++||+|+|+++|+|++.+ ...+|+
T Consensus 6 ~~l~v~~~--~~~pdG~~~~~~~~N-----G~~PGP~I~~~~GD~v~V~v~N~l~~~~----------------~~~~ts 62 (499)
T 3pxl_A 6 ADLTITDA--AVSPDGFSRQAVVVN-----GVTPGPLVAGNIGDRFQLNVIDNLTNHT----------------MLKSTS 62 (499)
T ss_dssp EEEEEEEE--EECTTSCCEEEEEET-----TBSSCCCEEEETTCEEEEEEEECCCCGG----------------GCSCBC
T ss_pred EEEEEEEE--EEcCCCcEEEEEEEC-----CcccCCeEEEeCCCEEEEEEEECCCCcc----------------CCCceE
Confidence 44444454 344544477899997 9999999999999999999999998510 012799
Q ss_pred EeeCCCCCC--CCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCC
Q 008840 146 VHLHGGIDE--PESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA 223 (551)
Q Consensus 146 iH~HG~~~~--~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~ 223 (551)
|||||+++. +.+||+|+ +|||+|.||++| +|+|++.+++||||||||.. .|+++||+|+|||++++ +
T Consensus 63 iHwHGl~~~~~~~~DGv~~--vtq~pI~PG~s~---tY~f~~~~~~GT~wYHsH~~----~q~~~GL~G~lIV~~~~-~- 131 (499)
T 3pxl_A 63 IHWHGFFQHGTNWADGPAF--INQCPISPGHSF---LYDFQVPDQAGTFWYHSHLS----TQYCDGLRGPFVVYDPN-D- 131 (499)
T ss_dssp EEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECSSCCEEEEEEECST----TGGGGTCEEEEEEECTT-C-
T ss_pred EEeCCcccCCCccccCCCc--cccCCCCCCCeE---EEEEEcCCCCceeeeeccch----hHHhccceeEEEEcCCc-c-
Confidence 999999986 45999998 899999999999 99999977999999999994 48999999999999776 2
Q ss_pred CCCCCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcc---------cCceeecC-eEEE
Q 008840 224 PLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA---------WPRMTVRR-RKYR 292 (551)
Q Consensus 224 ~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~---------~P~~~v~~-~~~R 292 (551)
+...+... +.|++|+|+||+++.+++. +. ....+|.++|||+. .|.++|++ ++||
T Consensus 132 ~~~~~~~~d~~~~~l~l~Dw~~~~~~~~-----~~---------~p~~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~R 197 (499)
T 3pxl_A 132 PHASRYDVDNDDTVITLADWYHTAAKLG-----PR---------FPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYR 197 (499)
T ss_dssp TTGGGCSBCSGGGEEEEEEECSSCTTTS-----CS---------SCSSCSEEEETTBCCCTTCTTCCCCEEEECTTCEEE
T ss_pred cccccCCCCCceEEEEEEcccCCccccc-----cC---------CCCCCcEEEECCCCcCCCCCCCCcceEEEcCCCEEE
Confidence 21111111 3567999999987655431 10 12347899999984 46899998 8999
Q ss_pred EEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCC
Q 008840 293 FRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVN 372 (551)
Q Consensus 293 lRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~ 372 (551)
|||||+|+.+.+.|+| +||+|+||++||.++ +|+.+++|.|+|||||||+|++++..| +|+|+..... +....
T Consensus 198 lRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~P~~~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~----~~~~~ 270 (499)
T 3pxl_A 198 FRLVSLSCNPNHTFSI-DGHNLTIIEVDSVNS-QPLEVDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNF----GNVGF 270 (499)
T ss_dssp EEEEECCSSCCEEEEE-TTBCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESS----SSCSC
T ss_pred EEEEecCCCeeEEEEE-CCCeEEEEEECCccc-CceEeeeEEECCCcEEEEEEECCCCCc-eEEEEEeccc----Ccccc
Confidence 9999999999999999 699999999999998 899999999999999999999988654 8999875321 10000
Q ss_pred CCCCceEEEEEccCCCCCCC-CC--------CCCCCCCCCCCCc----cCceeeEEeeeecccCCCCcceEEEcccccCC
Q 008840 373 DANGKVMKFIILKNRETDPW-RV--------PEKLIEYPSADLS----AASTTRYIAMYEYTSNTGKPTHLLINAKTLED 439 (551)
Q Consensus 373 ~~~~~vm~f~v~~~~~~~~~-~l--------P~~L~~~~~~~~~----~~~~~r~~~l~~~~~~~g~~~~~~INg~~f~~ 439 (551)
........+++.+....++. .. ...|.++.....+ .....+.+.+.-.. .+ ..|+|||++|..
T Consensus 271 ~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~--~~--~~w~iNg~s~~~ 346 (499)
T 3pxl_A 271 DGGINSAILRYDGAPAVEPTTNQTTSVKPLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNF--NG--SNFFINGASFVP 346 (499)
T ss_dssp GGGTTEEEEEETTSCSSCCCCCCCCCSSBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE--CS--SCEEETTBCCCC
T ss_pred CCCceEEEEEeCCCCCCCCCCCCCCCCcccccccccccccccCCCcccCCCCcEEEEEEEEe--cC--cEEEEcCEecCC
Confidence 01112345566553221111 00 1133443221111 01123344332111 11 269999999975
Q ss_pred CCCC---------------Cc---------ceeeeEEEE---eeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCc
Q 008840 440 PVTE---------------TP---------KTLDQTELV---NLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGW 492 (551)
Q Consensus 440 ~~~~---------------~~---------~~~~~~~l~---n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~w 492 (551)
+... .+ ..++++.+. |.....|+||+|+|.| .+.. ..|. .......+.|
T Consensus 347 ~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F--~Vl~-~~g~-~~~n~~~P~~ 422 (499)
T 3pxl_A 347 PTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTF--AVVR-SAGS-TVYNYDNPIF 422 (499)
T ss_dssp CSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCE--EEEE-CTTC-CCCCSSSCCE
T ss_pred CCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcE--EEEe-ccCC-cccccCCCCc
Confidence 3211 00 015667776 5667789999999965 4443 2342 2223346789
Q ss_pred CccEEeCC---CcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITP---GYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~p---g~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
||||.|++ |+++.|+|+.+ ||| |||||||++|++.|||..|..
T Consensus 423 rDtv~v~~~~pg~~~~irf~ad--------------nPG~W~~HCHi~~H~~~Gm~~~~~e 469 (499)
T 3pxl_A 423 RDVVSTGTPAAGDNVTIRFDTN--------------NPGPWFLHCHIDFHLEGGFAVVMAE 469 (499)
T ss_dssp ESEEECCCGGGTCEEEEEEECC--------------SCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred cceEEcCCcCCCcEEEEEEEcC--------------CCceEEEEeCChhHhhCCCcEEEEE
Confidence 99999987 99999977766 899 999999999999999998853
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-48 Score=391.88 Aligned_cols=192 Identities=21% Similarity=0.345 Sum_probs=163.9
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+.++++.++. .+.+|+|| |++|||+||+++||+|+|+|+|+|+. +
T Consensus 35 ~~~~l~~~~~~~~~~~g~-~~~~~~~n-----g~~pgP~i~~~~Gd~v~v~~~N~~~~---------------------~ 87 (288)
T 3gdc_A 35 REWDIVAVDKDFEIAPGI-IFKGWSYN-----GRIPGPTLWAREGDALRIHFTNAGAH---------------------P 87 (288)
T ss_dssp EEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCEEEEETTCEEEEEEEECSSS---------------------C
T ss_pred EEEEEEEEEEEEEeCCCc-EEEEEEEC-----CccCCCcEEEeCCCEEEEEEEeCCCC---------------------c
Confidence 467888889889998877 78999998 99999999999999999999999997 8
Q ss_pred eEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCC
Q 008840 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA 223 (551)
Q Consensus 144 t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~ 223 (551)
+++||||++ .+.+||+|+ .+++.|.||+++ +|+|++ +++||||||||.++ ++.|+++||+|+|||++++ .
T Consensus 88 ~~iH~HG~~-~~~~DG~p~--~~~~~i~PG~~~---~y~f~~-~~~Gt~~yH~H~~~-~~~~~~~Gl~G~liV~~~~-~- 157 (288)
T 3gdc_A 88 HTIHFHGVH-RATMDGTPG--IGAGSIAPGQSF---TYEFDA-TPFGTHLYHCHQSP-LAPHIAKGLYGGFIVEPKE-G- 157 (288)
T ss_dssp BCCEESSCC-CGGGSCCTT--STTCSBCTTCEE---EEEEEC-CSCEEEEEECCCSS-HHHHHHTTCEEEEEEECSS-C-
T ss_pred ccEEecccc-ccccCCCCC--ccceeECCCCEE---EEEEEc-CCCccEEEEecCcc-hHHHHhCcCeEEEEEeCCc-c-
Confidence 999999998 567999998 688899999999 999999 49999999999976 4679999999999999654 2
Q ss_pred CCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC----ceeecC-eEEEEEEEec
Q 008840 224 PLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP----RMTVRR-RKYRFRIINA 298 (551)
Q Consensus 224 ~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P----~~~v~~-~~~RlRllNa 298 (551)
.|.. ++|++|+++||+.+ +|+ .++.++|||+.++ .++++. +++||||+|+
T Consensus 158 ---~~~~-d~e~~l~~~d~~~~-~g~--------------------~~~~~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~ 212 (288)
T 3gdc_A 158 ---RPPA-DDEMVMVMNGYNTD-GGD--------------------DNEFYSVNGLPFHFMDFPVKVKQHELVRIHLINV 212 (288)
T ss_dssp ---CCCC-SEEEEEEEEEECCS-STT--------------------CCSEEEETTSTTHHHHSCEEEETTCCEEEEEEEC
T ss_pred ---CCCC-cceEEEEEeeEecC-CCC--------------------CcceEEECcccccccCcccccCCCCEEEEEEEeC
Confidence 2333 78999999998654 221 2579999999875 478887 8999999999
Q ss_pred CCCc-eEEEEEcCCceEEEEE
Q 008840 299 SNAR-FFRFFFTNGLRFIHVG 318 (551)
Q Consensus 299 s~~~-~~~l~l~~g~~~~via 318 (551)
+... ...+|| +|+.|++++
T Consensus 213 g~~~~~H~fHl-hG~~f~v~~ 232 (288)
T 3gdc_A 213 LEYDPINSFHI-HGNFFHYYP 232 (288)
T ss_dssp CCSSSEEEEEE-TTCCEEEEE
T ss_pred CCCCcceeEEE-cCCEEEEEc
Confidence 9654 678888 799998753
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=377.97 Aligned_cols=245 Identities=23% Similarity=0.373 Sum_probs=204.2
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+.++++.++. .+.+|+|| |++|||+|||++||+|+|+|+|.|+. +
T Consensus 3 ~~~~l~~~~~~~~~~~g~-~~~~~~~n-----g~~pGP~i~~~~Gd~v~v~~~N~l~~---------------------~ 55 (318)
T 3g5w_A 3 REFDLSIEDTRIVLVGKR-DFHTFAFN-----GQVPAPLIHVMEGDDVTVNVTNMTTL---------------------P 55 (318)
T ss_dssp EEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCEEEEETTCEEEEEEEECSSS---------------------C
T ss_pred EEEEEEEEEEEEEcCCCc-EEEEEEEC-----CccCCceEEEeCCCEEEEEEEeCCCC---------------------c
Confidence 367788889888998776 67899998 99999999999999999999999987 8
Q ss_pred eEEeeCCCCCCC--CCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhh-hccceEEEEEeCCC
Q 008840 144 TVVHLHGGIDEP--ESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNL-LAGLIGAYILRHPD 220 (551)
Q Consensus 144 t~iH~HG~~~~~--~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv-~~GL~G~~iV~dp~ 220 (551)
++|||||+++.+ .+||+|+ +++|+|.||+++ +|+|+++ ++||||||||.+ +..|+ ++||+|+|||++++
T Consensus 56 ~siH~HG~~~~~~~~~DG~p~--~t~~~i~PG~~~---~y~f~~~-~~Gt~wYH~H~~--~~~~~~~~Gl~G~lIV~~~~ 127 (318)
T 3g5w_A 56 HTIHWHGMLQRGTWQSDGVPH--ATQHAIEPGDTF---TYKFKAE-PAGTMWYHCHVN--VNEHVTMRGMWGPLIVEPKN 127 (318)
T ss_dssp BCCEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECC-SCEEEEEECCSS--HHHHHHHSCCEEEEEEECSS
T ss_pred eeEEecCcCCCCCcccCCCcc--cccccCCCCCEE---EEEEEcC-CCEEEEEEccCC--hhhhhccCCCEEEEEEcCCC
Confidence 999999999876 5999998 789999999999 9999996 899999999994 34455 59999999999544
Q ss_pred CCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccCc---eeecC-eEEEEEEE
Q 008840 221 VEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPR---MTVRR-RKYRFRII 296 (551)
Q Consensus 221 ~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~---~~v~~-~~~RlRll 296 (551)
. ..++...++|++|+|+||..+...+.. ..+ .++..+++++|||+.+|. ++++. ++|||||+
T Consensus 128 -~--~~~~~~~d~e~~l~l~dw~~~~~~~~~--~~~---------~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrli 193 (318)
T 3g5w_A 128 -P--LPIEKTVTKDYILMLSDWVSSWANKPG--EGG---------IPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLI 193 (318)
T ss_dssp -C--CHHHHTCCEEEEEEEEEECGGGTTCTT--CCC---------CTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEE
T ss_pred -c--ccccccccceeEEEEEeeccccccccc--cCC---------CCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEE
Confidence 2 222322478999999999765433210 000 112347899999999886 78888 89999999
Q ss_pred ecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 297 NASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 297 Nas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|++.. .+.||| +||.|+||+.||.++.+|..+|++.|+||||+||+|+++++ | .|.+....
T Consensus 194 N~~~~-~h~~hl-hGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~p-G-~w~~hCH~ 254 (318)
T 3g5w_A 194 GAGDH-VHAIHT-HGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNP-G-LWMIHDHV 254 (318)
T ss_dssp ECSSS-CEEEEE-TTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCSC-S-EEEEEESS
T ss_pred eCCCc-eEEEEE-CCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECCCC-e-eEEEEecc
Confidence 99965 678999 79999999999999988999999999999999999999874 4 88887654
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=383.24 Aligned_cols=283 Identities=18% Similarity=0.187 Sum_probs=223.3
Q ss_pred CCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEE
Q 008840 37 KLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQ 116 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~ 116 (551)
....|.++|++||.+++ ..++ ..++++.+.+.++++.++. .+.+|+|| |++|||+|+|++||+|+|+++
T Consensus 17 ~~~~~~~~~~ip~~~~~---~~~~--~~~~~l~~~~~~~~~~~G~-~~~~~~~n-----g~~pgP~i~v~~Gd~v~v~~~ 85 (327)
T 1kbv_A 17 IDAVTTHAPEVPPAIDR---DYPA--KVRVKMETVEKTMKMDDGV-EYRYWTFD-----GDVPGRMIRVREGDTVEVEFS 85 (327)
T ss_dssp EECCCBCTTCCCCCCCC---SSCC--EEEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCBEEEETTCEEEEEEE
T ss_pred ccccccCCCCCCCCccc---CCCC--EEEEEEEEEEEEEEeCCCc-EEEEEEEC-----CccCCCeEEEeCCCEEEEEEE
Confidence 34567788899988763 2233 2467888889888887666 78899998 999999999999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEec
Q 008840 117 NHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHD 196 (551)
Q Consensus 117 N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~ 196 (551)
|.++.. .++++||||+. .+||.+.. + .|.||++| +|+|+++ ++|||||||
T Consensus 86 N~~~~~-------------------~~~~ih~HG~~---~~dG~~~~--~--~i~PG~~~---~y~f~~~-~~Gt~wyH~ 135 (327)
T 1kbv_A 86 NNPSST-------------------VPHNVDFHAAT---GQGGGAAA--T--FTAPGRTS---TFSFKAL-QPGLYIYHC 135 (327)
T ss_dssp ECTTCS-------------------SCBCCEETTCC---SGGGGTTT--T--CBCTTEEE---EEEEECC-SCEEEEEEC
T ss_pred ECCCCC-------------------CceeeEeCccc---cCCCCCcc--e--eecCCCEE---EEEEECC-CCeEEEEEe
Confidence 998741 27999999985 47898762 2 38999999 9999996 699999999
Q ss_pred cCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCC----CceEecCCCCCCCCCCCCCCccCCc
Q 008840 197 HTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTN----GSIYMNSTGNNPSIHPQWQPEYFGD 272 (551)
Q Consensus 197 H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~----g~~~~~~~g~~~~~~~~~~~~~~gd 272 (551)
|.++ +..|+++||+|+|||++++ ++|.. ++|++|+++||..+.+ |...+.. ....+..++
T Consensus 136 h~~~-~~~~~~~Gl~G~~iV~~~~-----~~p~~-d~e~~l~~~d~~~~~~~~~~g~~~~~~---------~~~~~~~~~ 199 (327)
T 1kbv_A 136 AVAP-VGMHIANGMYGLILVEPKE-----GLPKV-DKEFYIVQGDFYTKGKKGAQGLQPFDM---------DKAVAEQPE 199 (327)
T ss_dssp CCSS-HHHHHHTTCEEEEEEECTT-----CCCCC-SEEEEEEEEEECBSSCTTCCEEECBCH---------HHHHHTCCS
T ss_pred CCCC-hhhhhhcceEEEEEEecCC-----CCCCC-ceEEEEEeeeeeccCccccccccccCh---------hHhccCCCc
Confidence 9987 7889999999999999643 34553 8899999999976542 1111100 000124578
Q ss_pred eEEECCcccCc-----eeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEE
Q 008840 273 VIVVNGKAWPR-----MTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVID 346 (551)
Q Consensus 273 ~~lVNG~~~P~-----~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~ 346 (551)
.++|||+.+|. +++++ ++|||||+|+|+++.+.|+| +||+|+||+.||++++ |..++++.|+||||+||+|+
T Consensus 200 ~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l-~Gh~f~vi~~DG~~~~-p~~~d~l~l~pGer~dv~v~ 277 (327)
T 1kbv_A 200 YVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHV-IGEIFDKVYVEGGKLI-NENVQSTIVPAGGSAIVEFK 277 (327)
T ss_dssp EEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEE-ETCCBSEEEGGGSSCE-ECSBSEEEECTTEEEEEEEE
T ss_pred eEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEE-eCCEEEEEEcCCCcCC-CCceeEEEECCCCEEEEEEE
Confidence 99999999874 88987 89999999999989999999 6999999999999994 99999999999999999999
Q ss_pred cCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCC
Q 008840 347 FSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR 387 (551)
Q Consensus 347 ~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~ 387 (551)
++++ | +|+|++...... ...+.+..|+|.+..
T Consensus 278 ~~~p-G-~y~l~~h~~~~~-------~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 278 VDIP-G-NYTLVDHSIFRA-------FNKGALGQLKVEGAE 309 (327)
T ss_dssp ECSC-E-EEEEEESSTHHH-------HHSSCEEEEEEESCC
T ss_pred eCCC-e-EEEEEecccccc-------ccCCcEEEEEECCCC
Confidence 9974 4 899988642110 012346677786543
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=366.89 Aligned_cols=245 Identities=23% Similarity=0.375 Sum_probs=203.9
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+.++++.++. .+.+|+|| |++|||+|+|++||+|+|+|+|.|+. +
T Consensus 4 ~~~~l~~~~~~~~~~~g~-~~~~~~~N-----G~~pGP~I~v~~Gd~v~v~v~N~l~~---------------------~ 56 (339)
T 2zwn_A 4 REFDMTIEEVTIKVAPGL-DYKVFGFN-----GQVPGPLIHVQEGDDVIVNVTNNTSL---------------------P 56 (339)
T ss_dssp EEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCEEEEETTCEEEEEEEEESSS---------------------C
T ss_pred EEEEEEEEEEEEEcCCCc-EEEEEEEC-----CccCCCeEEEECCCEEEEEEEECCCC---------------------C
Confidence 357788888888888777 78899998 99999999999999999999999987 7
Q ss_pred eEEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhh-ccceEEEEEeCCC
Q 008840 144 TVVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLL-AGLIGAYILRHPD 220 (551)
Q Consensus 144 t~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~-~GL~G~~iV~dp~ 220 (551)
++|||||+++.+. +||+|. ++||+|.||++| +|.|+++ ++||||||||.. ...|+. +||+|++||++++
T Consensus 57 ~siH~HG~~~~~~~~~DGvp~--vtq~~I~PG~~~---~y~f~~~-~~Gt~wyH~H~~--~~~q~~~~Gl~G~liV~p~~ 128 (339)
T 2zwn_A 57 HTIHWHGVHQKGTWRSDGVPG--VTQQPIEAGDSY---TYKFKAD-RIGTLWYHCHVN--VNEHVGVRGMWGPLIVDPKQ 128 (339)
T ss_dssp BCCEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECC-SCEEEEEECCSS--HHHHTTTSCCEEEEEEECSS
T ss_pred ccEEeCCCCcCCCcccCCCCc--cccCccCCCCeE---EEEEECC-CCEEEEEEecCC--chhhhhcCCceEeEEecCCC
Confidence 9999999999988 999998 789999999999 9999996 899999999985 456888 9999999999543
Q ss_pred CCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccCc---eeecC-eEEEEEEE
Q 008840 221 VEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPR---MTVRR-RKYRFRII 296 (551)
Q Consensus 221 ~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~---~~v~~-~~~RlRll 296 (551)
.. .++...++|++|+|+||.+...+.. ...+ .+...++.++|||+.+|. ++++. ++|||||+
T Consensus 129 -~~--~~~~~~d~e~~l~l~d~~~~~~~~~--~~~g---------~~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrli 194 (339)
T 2zwn_A 129 -PL--PIEKRVTKDVIMMMSTWESAVADKY--GEGG---------TPMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFF 194 (339)
T ss_dssp -CC--TTGGGCSEEEEEEEEEECGGGTTCT--TCCC---------STTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEE
T ss_pred -cc--cccccCCceEEEEeeheeccccccc--CCCC---------CCccccceEEEccccCCCcccEEECCCCEEEEEEE
Confidence 22 2333347899999999975322211 0000 011236899999999876 78887 89999999
Q ss_pred ecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 297 NASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 297 Nas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|+|+. .+.||| +||.|+||+.||.+++.|..+|++.|+||||+||+|+++++ | .|.+....
T Consensus 195 N~~~~-~h~~hl-hGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~p-G-~w~~hch~ 255 (339)
T 2zwn_A 195 GAGGG-IHAMHS-HGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADNP-G-RFIFHDHV 255 (339)
T ss_dssp ECSSS-CEEEEE-TTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCSC-S-EEEEEECC
T ss_pred eCCCc-eEEEEE-CCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCCC-e-eEEEEEec
Confidence 99955 889999 79999999999999867899999999999999999999875 4 68777653
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-44 Score=368.77 Aligned_cols=305 Identities=18% Similarity=0.155 Sum_probs=223.6
Q ss_pred CCCccccccCCCCccccceec-cCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEE
Q 008840 36 LKLEMFVDELPDMPKIKGYYA-ANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVT 114 (551)
Q Consensus 36 ~~~~~~~~~lp~pp~~~~~~~-~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~ 114 (551)
..|++|.++|++||.+.+... ..+..+..++++.+.+.++++.++...+.+|+|| |++|||+|++++||+|+|+
T Consensus 4 ~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~n-----g~~pgP~i~v~~Gd~v~v~ 78 (336)
T 1oe1_A 4 DKLPHTKVTLVAPPQVHPHEQATKSGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFN-----GSMPGPTLVVHEGDYVQLT 78 (336)
T ss_dssp GGSCEEECCCCCTTSCCCCCSSCCCCCCEEEEEEEEEEEEEECSTTCCEEEEEEET-----TBSSCCCEEEETTCEEEEE
T ss_pred cccccccccccCCCCCCcccccccCCCcEEEEEEEEEEEEEEECCCCcEEEEEEEC-----CccCCCeEEEcCCCEEEEE
Confidence 468999999999999865221 1111112478888889999998855578999998 9999999999999999999
Q ss_pred EEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEE
Q 008840 115 WQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWY 194 (551)
Q Consensus 115 l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wY 194 (551)
|+|++... .++++|+||.. ..||.+. +++ |.||++| +|+|+++ ++|||||
T Consensus 79 ~~N~~~~~-------------------~~h~~~~h~~~---~~~~~~~--~~~--i~pG~~~---~y~f~~~-~~Gt~~y 128 (336)
T 1oe1_A 79 LVNPATNA-------------------MPHNVDFHGAT---GALGGAK--LTN--VNPGEQA---TLRFKAD-RSGTFVY 128 (336)
T ss_dssp EEECTTCC-------------------SCBCCEETTSC---SGGGGGG--GCC--BCTTEEE---EEEEECC-SCEEEEE
T ss_pred EEcCCCCC-------------------ccccceECCCC---CCCCCcc--eEE--eCCCCEE---EEEEECC-CCeEEEE
Confidence 99997531 15778888753 2344443 454 8999999 9999996 7999999
Q ss_pred eccCCCchhhhhhccceEEEEEeCCCC-CCCCCCCCCCcCceeEEEEEeeec--CCCceE-ecCCCCCCCCCCCCCCccC
Q 008840 195 HDHTMGLTRVNLLAGLIGAYILRHPDV-EAPLRLPSGDVFDRPLFVFDRNFL--TNGSIY-MNSTGNNPSIHPQWQPEYF 270 (551)
Q Consensus 195 H~H~~g~t~~qv~~GL~G~~iV~dp~~-~~~~~lP~~~~~e~~lvl~d~~~~--~~g~~~-~~~~g~~~~~~~~~~~~~~ 270 (551)
|||.++.+..|+++||+|+|||++++. .++.+.|..+++|++|+++||++. ++|++. |...+........++.+..
T Consensus 129 H~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 208 (336)
T 1oe1_A 129 HCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLT 208 (336)
T ss_dssp ECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTC
T ss_pred ecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccccCCceeecccccccccchhhHhhcCC
Confidence 999999999999999999999995431 123334545688899999999874 455542 1100000000000112356
Q ss_pred CceEEECCcc-----cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceE-ecEEEEccCceEEE
Q 008840 271 GDVIVVNGKA-----WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVV-TNDTVLAPAEIADV 343 (551)
Q Consensus 271 gd~~lVNG~~-----~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~-~~~l~l~pgeR~dV 343 (551)
++.++|||+. .|.++|++ +++ ||+|++..+.+++++.+||.|+|++ ||+++..|.. ++++.|+||||+||
T Consensus 209 ~~~~liNG~~~~~~~~~~l~v~~Gerv--Rlin~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dv 285 (336)
T 1oe1_A 209 PSHIVFNGKVGALTGANALTAKVGETV--LLIHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAA 285 (336)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTCEE--EEEEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEE
T ss_pred CCEEEECCeeccCCCCcceEcCCCCEE--EEEecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEE
Confidence 8999999998 47899988 655 5678888887777776899999997 9999966654 79999999999999
Q ss_pred EEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCC
Q 008840 344 VIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR 387 (551)
Q Consensus 344 lv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~ 387 (551)
+|+++++ | +|.+.+...... ...+.+..|+|.+..
T Consensus 286 lv~~~~p-G-~y~~~~h~~~~~-------~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 286 LYTFKQP-G-VYAYLNHNLIEA-------FELGAAGHIKVEGKW 320 (336)
T ss_dssp EEECCSC-E-EEEEEESSHHHH-------HTTSCEEEEEEESCC
T ss_pred EEEcCCC-c-eEEEEechhhcc-------ccCCCeEEEEECCCC
Confidence 9999984 4 899887641100 012357788887654
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=409.25 Aligned_cols=214 Identities=16% Similarity=0.124 Sum_probs=158.9
Q ss_pred CCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC------cceeccc
Q 008840 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK------SWFTAGF 169 (551)
Q Consensus 96 g~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~------~~~t~~~ 169 (551)
+++|||+|||++||+|+|+|+|+|+. +|+|||||+++++.+||+|. ..++||+
T Consensus 70 ~~~pGP~Ir~~~GD~v~V~v~N~l~~---------------------~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq~~ 128 (742)
T 2r7e_A 70 MGLLGPTIQAEVYDTVVITLKNMASH---------------------PVSLHAVGVSYWKASEGAEYDDQTSQREKEDDK 128 (742)
T ss_dssp TTTSEEEEEECSEEEEECCEECCSSS---------------------CCCCCCSSSCCCSSSSCCCSSCSCCSSSSSSSS
T ss_pred cCCcCCeEEEECCCEEEEEEEECCCC---------------------CEeEEecCcccCccccCCccCCCCcccccccCc
Confidence 37999999999999999999999987 89999999999988888874 2378999
Q ss_pred cCCCCCcceeeEEEEcCc---------cCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEE
Q 008840 170 EEKGPTWTNETYHYHNMQ---------QPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVF 240 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~---------~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~ 240 (551)
|.||++| +|+|++.+ ++||||||||.+ +..|+++||+|+|||+++. ......... .+|++|+++
T Consensus 129 I~PG~s~---tY~f~v~~~~gP~~~d~~~GT~wYHsH~~--~~~q~~~GL~G~lIV~~~~-~~~~~~~~~-~~e~~l~~~ 201 (742)
T 2r7e_A 129 VFPGGSH---TYVWQVLKENGPMASDPLCLTYSYLSHVD--LVKDLNSGLIGALLVCREG-SLAKEKTQT-LHKFILLFA 201 (742)
T ss_dssp CCTTCEE---CCEEEECGGGSCCSSSCSSCCEEECCCSC--SHHHHHHHCCEEEEECSSS-CTTTTTTTC-CCEECCCEE
T ss_pred CCCCCeE---EEEEEeccccCCCcCCCCcEEEEEccCCC--hHHHhhCCcEEEEEEecCc-ccCcccCce-eeEEEEEee
Confidence 9999999 99999854 469999999995 3569999999999999765 211111111 378888887
Q ss_pred EeeecCCCceEecCCCCC-CCCCCCCCCccCCceEEECCccc---CceeecC-eEEEEEEEecCCCc-eEEEEEcCCceE
Q 008840 241 DRNFLTNGSIYMNSTGNN-PSIHPQWQPEYFGDVIVVNGKAW---PRMTVRR-RKYRFRIINASNAR-FFRFFFTNGLRF 314 (551)
Q Consensus 241 d~~~~~~g~~~~~~~g~~-~~~~~~~~~~~~gd~~lVNG~~~---P~~~v~~-~~~RlRllNas~~~-~~~l~l~~g~~~ 314 (551)
++ +++.+.+....... ....+. ......+.++|||+.+ |.+.+++ ++|||||+|+|+.. .+.||| +||.|
T Consensus 202 ~~--de~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hl-hGh~f 277 (742)
T 2r7e_A 202 VF--DEGKSWHSETKNSLMQDRDAA-SARAWPKMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFL-EGHTF 277 (742)
T ss_dssp CC--CCSSSSCCCCCC-------CC-SCCCCCCCCEETTBCTBCCCCCEECSSSCEEEECCCCCSSSCCCCCCC-TTCCC
T ss_pred cc--cCCccccccccccccccCCCc-cccccCceEEECCccCCCCcceEEcCCCEEEEEEEeCCCCCcceEEEE-CCCEE
Confidence 63 32222211100000 000000 0011256789999985 6788888 89999999999765 678888 79999
Q ss_pred EEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCC
Q 008840 315 IHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES 350 (551)
Q Consensus 315 ~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~ 350 (551)
+|++ ..+|++.|.||++++|++.++++
T Consensus 278 ~Vvg---------~~~Dtv~v~Pg~~~~v~~~~~~p 304 (742)
T 2r7e_A 278 LVRN---------HRQASLEISPITFLTAQTLLMDL 304 (742)
T ss_dssp EETT---------EECCSCCCCTTCCCEEEECCCSC
T ss_pred EEEe---------EecceEEeCCCcEEEEEEEeCCC
Confidence 9984 24678888899999998888653
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=358.36 Aligned_cols=178 Identities=21% Similarity=0.325 Sum_probs=141.3
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
+++|.+.+. ....|+|+....||++||||||+++||+|+|+|+|+|+. +|
T Consensus 31 ~~~~~a~~~---------~~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~---------------------~~ 80 (299)
T 3t9w_A 31 RITMYAEKI---------SDELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDR---------------------VL 80 (299)
T ss_dssp EEEEEEEEE---------ETTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSS---------------------CB
T ss_pred EEEEEEEec---------CCCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCC---------------------Cc
Confidence 567666554 234588987788999999999999999999999999998 89
Q ss_pred EEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcC------------ccCceeEEeccCCCc--hhhhhhccc
Q 008840 145 VVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNM------------QQPGNTWYHDHTMGL--TRVNLLAGL 210 (551)
Q Consensus 145 ~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~------------~~~Gt~wYH~H~~g~--t~~qv~~GL 210 (551)
||||||+++++.+||++ +++|+|.||++| +|+|.+. +++||||||||.++. +..|+++||
T Consensus 81 siH~HG~~~~~~~DG~~---~~~~~i~PG~t~---~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL 154 (299)
T 3t9w_A 81 SLHPHGVDYDVNSDGTL---MNGSAVMPGQTR---RYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGL 154 (299)
T ss_dssp CCEESSSBCCGGGSCCT---TTTCCBCTTCEE---EEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTC
T ss_pred cEEeCCcccCCccCCCc---cccCccCCCCeE---EEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccc
Confidence 99999999999999986 578899999999 9999874 368999999999874 456999999
Q ss_pred eEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccCceeecC-e
Q 008840 211 IGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRR-R 289 (551)
Q Consensus 211 ~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~-~ 289 (551)
+|+|||+++. + +. .++|++|+++||.++.. .. + ..|.++++. +
T Consensus 155 ~G~liV~~~~-~-----~~-~d~e~~l~~~~~~~Ng~--~~-------------------~--------~~p~l~v~~Ge 198 (299)
T 3t9w_A 155 YGALVVRRQG-D-----LL-PKRQFTVVFNDMMINNR--AH-------------------H--------DAPTFEANLGE 198 (299)
T ss_dssp EEEEEEECTT-C-----CC-CSEEEEEEEETTEETTC--CT-------------------T--------CCCEEEEETTC
T ss_pred cceEEEeccc-c-----cC-ccccceeeeeeeeecCc--cc-------------------c--------ccccceecCCC
Confidence 9999999655 2 11 27899999887654321 10 0 124567776 8
Q ss_pred EEEEEEEecCCCceEEEEEcCCceEEE
Q 008840 290 KYRFRIINASNARFFRFFFTNGLRFIH 316 (551)
Q Consensus 290 ~~RlRllNas~~~~~~l~l~~g~~~~v 316 (551)
++||||+|++.. ...||| +|+.|++
T Consensus 199 ~Vr~~liN~~~~-~HpfHl-HGh~F~v 223 (299)
T 3t9w_A 199 RVEWIAIGHGSN-FHTFHL-HGHRWLD 223 (299)
T ss_dssp EEEEEEEEESSC-CCEEEE-TTCCEES
T ss_pred EEEEEEEecccc-ceeeeE-ecceEEE
Confidence 999999998854 356777 7888753
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-42 Score=356.86 Aligned_cols=302 Identities=16% Similarity=0.077 Sum_probs=212.0
Q ss_pred CCCCCccccccCCC----CccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCC
Q 008840 34 NPLKLEMFVDELPD----MPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGI 109 (551)
Q Consensus 34 ~~~~~~~~~~~lp~----pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd 109 (551)
+...|+++..+|.. ||.+++... .+. ..++++.+.+.++++.++...+.+|+|| |++|||+|++++||
T Consensus 8 ~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~--~~~~~l~~~~~~~~~~~dg~~~~~~~~n-----g~~pgP~i~v~~Gd 79 (340)
T 2bw4_A 8 DISTLPRVKVDLVKPPFVHAHDQVAKT-GPR--VVEFTMTIEEKKLVIDREGTEIHAMTFN-----GSVPGPLMVVHEND 79 (340)
T ss_dssp CGGGSCEEECCCCCTTSCCCCCSBCSS-SCC--EEEEEEEEEEEEEECSTTCCEEEEEEET-----TBSSCCEEEEETTC
T ss_pred cccccceeeeeeecCCCCCcccccccC-CCc--EEEEEEEEEEEEEEECCCCcEEEEEEEC-----CCCCCCcEEEcCCC
Confidence 45557777766544 444433222 222 2468888889989998755578899997 99999999999999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCc
Q 008840 110 DTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQ 187 (551)
Q Consensus 110 ~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~ 187 (551)
+|+|+|+|.+ +++||||++.... .||++ .+++ |.||+++ +|+|+++
T Consensus 80 ~v~v~~~N~~------------------------~~~~~hg~~~~~~~~~~~~~--~~~~--i~PG~~~---~y~~~~~- 127 (340)
T 2bw4_A 80 YVELRLINPD------------------------TNTLLHNIDFHAATGALGGG--ALTQ--VNPGEET---TLRFKAT- 127 (340)
T ss_dssp EEEEEEEECT------------------------TCCSCBCCEETTSCSGGGGG--GGCC--BCTTEEE---EEEEECC-
T ss_pred EEEEEEEeCC------------------------CCCccCcceeCCcCCCCCCc--cceE--eCCCCEE---EEEEECC-
Confidence 9999999985 3355565554432 22332 2454 9999999 9999997
Q ss_pred cCceeEEeccCCCchhhhhhccceEEEEEeCCCC-CCCCCCCCCCcCceeEEEEEeee--cCCCceE-ecCCCCCCCCCC
Q 008840 188 QPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDV-EAPLRLPSGDVFDRPLFVFDRNF--LTNGSIY-MNSTGNNPSIHP 263 (551)
Q Consensus 188 ~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~-~~~~~lP~~~~~e~~lvl~d~~~--~~~g~~~-~~~~g~~~~~~~ 263 (551)
++||||||||.++.+..|+++||+|+|||++++. .+..+.|..+++|++|+++||++ +.+|.+. +...+.......
T Consensus 128 ~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~ 207 (340)
T 2bw4_A 128 KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAV 207 (340)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHH
T ss_pred CCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeeccccCCcccccccccccccchh
Confidence 6999999999999999999999999999996531 11222343457889999999987 4556542 100000000000
Q ss_pred CCCCccCCceEEECCccc-----CceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCce-EecEEEEc
Q 008840 264 QWQPEYFGDVIVVNGKAW-----PRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPV-VTNDTVLA 336 (551)
Q Consensus 264 ~~~~~~~gd~~lVNG~~~-----P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~-~~~~l~l~ 336 (551)
.+..+..++.++|||+.+ |.+++++ +++| |+|+++++.+++++.+||.|+|++ ||+++..|. .++++.|+
T Consensus 208 ~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~R--l~n~~~~~~~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~ 284 (340)
T 2bw4_A 208 KAMRTLTPTHIVFNGAVGALTGDHALTAAVGERVL--VVHSQANRDTRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIP 284 (340)
T ss_dssp HHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEE--EEEEESSSCBCEEEETCCEEEEET-TCCTTSCCEEEESCCCBC
T ss_pred hHhhcCCCCEEEECCccCCccCCCceEcCCCCEEE--EEECCCCCccceEEecCcceEEeC-CCcccCCccccceEEEeC
Confidence 011134578999999996 7899988 6665 556666666666655899999996 999997776 48999999
Q ss_pred cCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCC
Q 008840 337 PAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR 387 (551)
Q Consensus 337 pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~ 387 (551)
||||+||+|+++++ | .|.+++..... ....+....|+|.+..
T Consensus 285 pGer~~v~v~~~~p-G-~y~~~~h~~~~-------h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 285 GGTAGAAFYTFRQP-G-VYAYVNHNLIE-------AFELGAAGHFKVTGEW 326 (340)
T ss_dssp TTEEEEEEEECCSC-E-EEEEEESSHHH-------HHTTSCEEEEEEESCC
T ss_pred CCceEEEEEECCCC-e-eeEEEcCchHH-------HHhCCCEEEEEECCCC
Confidence 99999999999984 4 89988754210 0012346678887644
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=365.01 Aligned_cols=289 Identities=18% Similarity=0.198 Sum_probs=220.1
Q ss_pred CCccccccCCCCcccccee-ccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEE
Q 008840 37 KLEMFVDELPDMPKIKGYY-AANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTW 115 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~~-~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l 115 (551)
.++++...|..||.+.+.. ...+. ..++++.+.+.++++.++. .+.+|+|| |++|||+|++++||+|+|+|
T Consensus 3 ~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~l~~~~~~~~~~~g~-~~~~~~~n-----g~~pgp~i~v~~Gd~v~v~~ 74 (442)
T 2zoo_A 3 NLKTEQAILTPPPMVPPAINRDHSA--KVVINLETREQVGRIADGV-EYVFWSFG-----ETVPGSFIRVREGDEIEFNL 74 (442)
T ss_dssp -CCEEECCCBCTTCCCCCCCCSSCC--EEEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCBEEEETTCEEEEEE
T ss_pred CCcchhhhcccCCCCCCCcccCCCc--EEEEEEEEEEEEEEcCCCc-EEEEEEEC-----CcCCCCcEEEeCCCEEEEEE
Confidence 4666777776666654321 12232 2467777888888876655 68899998 99999999999999999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEe
Q 008840 116 QNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYH 195 (551)
Q Consensus 116 ~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH 195 (551)
+|.|+.. .++++||||++. +||.++. + .|.||+++ +|+|+++ ++||||||
T Consensus 75 ~N~l~~~-------------------~~~~iH~HG~~~---~dG~~~~--~--~i~pg~~~---~y~f~~~-~~Gt~~yH 124 (442)
T 2zoo_A 75 SNHPSSK-------------------MPHNIDLHAVTG---PGGGAES--S--FTAPGHTS---TFNFKAL-NPGLYIYH 124 (442)
T ss_dssp EECTTCS-------------------SCBCCEETTCCS---GGGGGGG--C--CBCTTCEE---EEEEECC-SCEEEEEE
T ss_pred EECCCCC-------------------CCCCEEecCCcC---CCCCCcc--E--EECCCCEE---EEEEEcC-CCeEEEEe
Confidence 9998741 179999999874 6888762 2 48999999 9999996 79999999
Q ss_pred ccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCC-CceEecCCCCCCCCCCCCCCccCCceE
Q 008840 196 DHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTN-GSIYMNSTGNNPSIHPQWQPEYFGDVI 274 (551)
Q Consensus 196 ~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~-g~~~~~~~g~~~~~~~~~~~~~~gd~~ 274 (551)
||.++ +..|+++||+|+|||++++ .+|. +++|++|+++||+++.+ +........ .....+..++.+
T Consensus 125 ~H~~~-~~~~~~~Gl~G~~iv~~~~-----~~~~-~d~e~~l~l~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 191 (442)
T 2zoo_A 125 CATAP-VGMHIANGMYGLILVEPKE-----GLAP-VDREYYLVQGDFYTKGEFGEAGLQPFD------MAKAIDEDADYV 191 (442)
T ss_dssp CCCSS-HHHHHHTTCEEEEEEECTT-----CCCC-CSEEEEEEEEEECBSSCTTCCEEECBC------HHHHHTTCCSEE
T ss_pred cCCCC-hHHHHhCccEEEEEEeCCC-----CCCC-CCceEEEEeeeeeccCcccccccccCC------hhHhccCCCCEE
Confidence 99976 7789999999999999443 2344 38899999999987654 221100000 000112457899
Q ss_pred EECCccc-----CceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 275 VVNGKAW-----PRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 275 lVNG~~~-----P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
+|||+.+ +.+++++ ++|||||+|+|+.+.+.|+| +||.|++|+.||++++ |..++++.|+||||+||+|+++
T Consensus 192 liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i-~g~~~~vi~~DG~~~~-p~~~~~~~l~pg~r~~v~v~~~ 269 (442)
T 2zoo_A 192 VFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHV-IGEIFDTVYVEGGSLK-NHNVQTTLIPAGGAAIVEFKVE 269 (442)
T ss_dssp EETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEE-ETCCBSEEEGGGSSCE-ECSBSEEEECTTEEEEEEEECC
T ss_pred EECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEE-cCCEEEEEecCCccCC-CccceEEEECCCeeEEEEEEcC
Confidence 9999987 4688887 89999999999989999999 5999999999999994 9999999999999999999999
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCC
Q 008840 349 ESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNR 387 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~ 387 (551)
+. ++|.++....... ...+.+..|+|.+..
T Consensus 270 ~~--G~y~~~~~~~~~~-------~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 270 VP--GTFILVDHSIFRA-------FNKGALAMLKVEGPD 299 (442)
T ss_dssp SC--EEEEEEESSTHHH-------HTTSCEEEEEEESCC
T ss_pred CC--CeEEEEecccccc-------cccCceEEEEecCCC
Confidence 74 4899987542110 012356777776643
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=349.32 Aligned_cols=298 Identities=15% Similarity=0.133 Sum_probs=209.0
Q ss_pred CCccccccCCCCccccce---eccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEE
Q 008840 37 KLEMFVDELPDMPKIKGY---YAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYV 113 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~---~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v 113 (551)
.++++...|..|+.+.+. ....+.. .++++.+.+.++++.++. .+.+|+|| |++|||+|++++||+|+|
T Consensus 5 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~~~~l~~~~~~~~~~~g~-~~~~~~~n-----g~~pgP~i~~~~Gd~v~v 76 (333)
T 1mzy_A 5 NLPRVKHTLVPPPFAHAHEQVAASGPVI--NEFEMRIIEKEVQLDEDA-YLQAMTFD-----GSIPGPLMIVHEGDYVEL 76 (333)
T ss_dssp TSCEEECCCCCTTSBCSCCSSCSSSCCE--EEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCEEEEETTCEEEE
T ss_pred ccceeeeeeccCCCCCccccccCCCCcE--EEEEEEEEEEEEEcCCCc-EEEEEEEC-----CccCCCcEEecCCCEEEE
Confidence 355666555544332210 1122332 467777888888886555 68899997 999999999999999999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCce
Q 008840 114 TWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGN 191 (551)
Q Consensus 114 ~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt 191 (551)
+++|. .+++||||++.... .||.+. +++ |.||+++ +|+|+++ ++||
T Consensus 77 ~~~N~------------------------~~~~h~Hg~~~~~~~~~~~~~~--~~~--i~PG~~~---~y~f~~~-~~Gt 124 (333)
T 1mzy_A 77 TLINP------------------------PENTMPHNIDFHAATGALGGGG--LTL--INPGEKV---VLRFKAT-RAGA 124 (333)
T ss_dssp EEEEC------------------------TTCCSCBCCEETTSCSGGGGGG--GCC--BCTTEEE---EEEEECC-SCEE
T ss_pred EEEEC------------------------CCCcccccceecCCCCCCCCCc--eeE--eCCCCEE---EEEEECC-CCEE
Confidence 99998 47899999987764 333333 554 9999999 9999996 7999
Q ss_pred eEEeccCCC-chhhhhhccceEEEEEeCCCC-CCCCCCCCCCcCceeEEEEEeee--cCCCceE-ecCCCCCCCCCCCCC
Q 008840 192 TWYHDHTMG-LTRVNLLAGLIGAYILRHPDV-EAPLRLPSGDVFDRPLFVFDRNF--LTNGSIY-MNSTGNNPSIHPQWQ 266 (551)
Q Consensus 192 ~wYH~H~~g-~t~~qv~~GL~G~~iV~dp~~-~~~~~lP~~~~~e~~lvl~d~~~--~~~g~~~-~~~~g~~~~~~~~~~ 266 (551)
||||||.++ .+..|+++||+|+|||++++. .++.+.|..+++|++|+++||++ +.+|++. +...+........++
T Consensus 125 ~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 204 (333)
T 1mzy_A 125 FVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVM 204 (333)
T ss_dssp EEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHH
T ss_pred EEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCccccccccccccccccccchhHHh
Confidence 999999987 788899999999999995431 12233454458899999999988 4455542 110000000000011
Q ss_pred CccCCceEEECCccc-----CceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceE-ecEEEEccCc
Q 008840 267 PEYFGDVIVVNGKAW-----PRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVV-TNDTVLAPAE 339 (551)
Q Consensus 267 ~~~~gd~~lVNG~~~-----P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~-~~~l~l~pge 339 (551)
.+..++.++|||+.+ +.++|++ +++||| |+++++.+++++.++|.|+||+ ||++++.|.. ++++.|+|||
T Consensus 205 ~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~--n~~~~~~~~~h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGe 281 (333)
T 1mzy_A 205 DTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFV--HSQPNRDSRPHLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGT 281 (333)
T ss_dssp TTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEE--EEESSSCBCEEEETCCEEEEET-TCCTTSCCEEEESBCCBCTTE
T ss_pred hccCCcEEEECCcccccCCCcceEecCCCEEEEE--ECCCCCccccEEECCCCeEEEe-CCcccCCCccCcceEEECCCc
Confidence 234589999999985 4488988 666655 5555555555655899999998 9999977764 8999999999
Q ss_pred eEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccC
Q 008840 340 IADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKN 386 (551)
Q Consensus 340 R~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~ 386 (551)
|+||+|+++++ | +|.+.+...... ...+....|+|.+.
T Consensus 282 r~~v~v~a~~p-G-~y~~~ch~~~h~-------~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 282 AGAALYKFLQP-G-VYAYVNHNLIEA-------VHKGATAHVLVEGE 319 (333)
T ss_dssp EEEEEEECCSC-E-EEEEEESSHHHH-------HTTCCEEEEEEESC
T ss_pred eEEEEEEcCCC-E-EEEEecChhhhH-------hhCCCEEEEEEcCC
Confidence 99999999974 4 888887532110 01234566888754
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=386.09 Aligned_cols=240 Identities=19% Similarity=0.230 Sum_probs=182.0
Q ss_pred EEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCC
Q 008840 72 EKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG 151 (551)
Q Consensus 72 ~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~ 151 (551)
.+...+.++. .+++|+ ++||||||+++||+|+|+|+|+|++ +|+|||||+
T Consensus 75 ~~~~~~~~~~-~~~~w~--------~~PGP~Ir~~~GD~v~v~v~N~l~~---------------------~tsiHwHGl 124 (1065)
T 2j5w_A 75 YTDETFRTTI-EKPVWL--------GFLGPIIKAETGDKVYVHLKNLASR---------------------PYTFHSHGI 124 (1065)
T ss_dssp ESSSSTTSBC-CCCGGG--------TTSCCCEEEETTCEEEEEEEEESSS---------------------CBCCEESSS
T ss_pred ecceeecCCc-cccccc--------CCcCCeEEEeCCeEEEEEEEECCCC---------------------CeeEEeCCc
Confidence 3334576666 567775 6999999999999999999999997 899999999
Q ss_pred CCCCCCCCCC--Cc----ceeccccCCCCCcceeeEEEEcCcc---------CceeEEeccCCCchhhhhhccceEEEEE
Q 008840 152 IDEPESDGYA--KS----WFTAGFEEKGPTWTNETYHYHNMQQ---------PGNTWYHDHTMGLTRVNLLAGLIGAYIL 216 (551)
Q Consensus 152 ~~~~~~DG~p--~~----~~t~~~i~pG~~~~~~~y~f~~~~~---------~Gt~wYH~H~~g~t~~qv~~GL~G~~iV 216 (551)
++++.+||+| +. .+++|+|+||++| +|+|++.++ +||||||||.+ +..|+++||+|+|||
T Consensus 125 ~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~---tY~f~~~~~~gp~~~d~~aGT~wYHsH~~--~~~qv~~GL~G~lIV 199 (1065)
T 2j5w_A 125 TYYKEHEGAIYPDNTTDFQRADDKVYPGEQY---TYMLLATEEQSPGEGDGNCVTRIYHSHID--APKDIASGLIGPLII 199 (1065)
T ss_dssp BCCGGGCCCCSCCCCCGGGTGGGCBCTTCEE---EEEEECCSTTSCCTTSCSEEEEEEECCSS--HHHHHHHTCEEEEEE
T ss_pred cCCcccCCcccCCCCCcccccccccCCCCEE---EEEEEeccccCCccCCCCceEEEEEeccC--chhHhhCccEEEEEE
Confidence 9998888874 22 2678999999999 999999865 49999999997 456899999999999
Q ss_pred eCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecC----CCCCCCCCCCCCCc--cCCceEEECCcc---cCceeec
Q 008840 217 RHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNS----TGNNPSIHPQWQPE--YFGDVIVVNGKA---WPRMTVR 287 (551)
Q Consensus 217 ~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~----~g~~~~~~~~~~~~--~~gd~~lVNG~~---~P~~~v~ 287 (551)
++++ ...++.+...++|++|+|+|+. .+++.+... ....+......... ..++.++|||+. .|.++++
T Consensus 200 ~~~~-~~~~p~~~~~d~e~~l~l~d~d--~~~~w~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~iNG~~~~~~~~l~v~ 276 (1065)
T 2j5w_A 200 CKKD-SLDKEKEKHIDREFVVMFSVVD--ENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSVNGYTFGSLSGLSMC 276 (1065)
T ss_dssp ECTT-CBSSSSBTTCCEEEEEEEEEEE--GGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEETTEETTCCCCCEEE
T ss_pred ecCc-ccCCCccCCCccceEEEeeeec--CCccccccchhhhhhcCccccccccccccccCcEEEECCccCCCCcceEEC
Confidence 9765 3222233344789999999843 222211000 00000000000000 135689999998 4788998
Q ss_pred C-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 288 R-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 288 ~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
+ ++|||||+|+|+. ..+.|+| +||.|++ +|..+|+|.|+||||+||+|+++++ | .|.++...
T Consensus 277 ~Ge~vRlRliNag~~~~~~~~~i-~Gh~f~v---------~p~~~dtv~I~pGer~dVlv~~~~p-G-~y~i~~h~ 340 (1065)
T 2j5w_A 277 AEDRVKWYLFGMGNEVDVHAAFF-HGQALTN---------KNYRIDTINLFPATLFDAYMVAQNP-G-EWMLSCQN 340 (1065)
T ss_dssp TTCEEEEEEEECSSTTCCEEEEE-TTCCEEE---------TTEEESEEEECBTCEEEEEEECCSC-E-EEEEEECS
T ss_pred CCCEEEEEEEcCCcccceeEEEE-cCCEEEE---------CCeeecEEEECCCcEEEEEEEeCCC-e-eEEEEecC
Confidence 8 8999999999976 6899999 7999992 5789999999999999999999984 4 89987653
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=326.88 Aligned_cols=231 Identities=21% Similarity=0.289 Sum_probs=182.8
Q ss_pred ccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCc
Q 008840 84 TPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKS 163 (551)
Q Consensus 84 ~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~ 163 (551)
...|+|+....||++|||+||+++||+|+|+|+|+|+. +|||||||+++++.+||+|.
T Consensus 25 ~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~---------------------~~siH~HG~~~~~~~dG~~~- 82 (313)
T 3tas_A 25 GGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDV---------------------PVSLHVHGLDYEISSDGTKQ- 82 (313)
T ss_dssp GGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSS---------------------CBCCEESSSBCCGGGSCSTT-
T ss_pred CCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCC---------------------CccEeecCCcCCccCCCCcc-
Confidence 45578887788999999999999999999999999998 89999999999999999984
Q ss_pred ceeccccCCCCCcceeeEEEEcC------------ccCceeEEeccCCCc--hhhhhhccceEEEEEeCCCCCCCCCCCC
Q 008840 164 WFTAGFEEKGPTWTNETYHYHNM------------QQPGNTWYHDHTMGL--TRVNLLAGLIGAYILRHPDVEAPLRLPS 229 (551)
Q Consensus 164 ~~t~~~i~pG~~~~~~~y~f~~~------------~~~Gt~wYH~H~~g~--t~~qv~~GL~G~~iV~dp~~~~~~~lP~ 229 (551)
++++|.||++| +|+|.+. +++||||||||.++. +..|+++||+|+|||+++. + +.
T Consensus 83 --~~~~i~PG~~~---~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~-~-----~~ 151 (313)
T 3tas_A 83 --SRSDVEPGGTR---TYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG-D-----VL 151 (313)
T ss_dssp --TTCCBCTTCEE---EEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT-C-----BC
T ss_pred --ccCCcCCCCEE---EEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccc-c-----cc
Confidence 67889999999 9999764 368999999999765 5678999999999999655 2 11
Q ss_pred CCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccCceeecC-eEEEEEEEecCCCceEEEEE
Q 008840 230 GDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRR-RKYRFRIINASNARFFRFFF 308 (551)
Q Consensus 230 ~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~-~~~RlRllNas~~~~~~l~l 308 (551)
.|+|++|+++||.++.... ...|.++++. +++||||+|+++ ....|||
T Consensus 152 -~d~e~~l~~~d~t~Ng~~~-----------------------------~~~~~l~v~~Ge~vr~~liN~g~-~~hpfHl 200 (313)
T 3tas_A 152 -PDRTHTIVFNDMTINNRPA-----------------------------HTGPDFEATVGDRVEFVMITHGE-YYHTFHL 200 (313)
T ss_dssp -CSEEEEEEEETTEETTCCT-----------------------------TCCCCEEEETTCEEEEEEEEESS-CCEEEEE
T ss_pred -ccccceeeccchhcccCCc-----------------------------ccccccccccCCEEEEEEecccc-cceeeee
Confidence 2889999999986542210 0124567776 899999999995 4677888
Q ss_pred cCCceEEEEEcCCCCCC--CceEecEEEEccCceEEEEEEcCCCC-CceEEEecCCCCCCCCCCCCCCCCCceEEEEEcc
Q 008840 309 TNGLRFIHVGSDSAYLG--KPVVTNDTVLAPAEIADVVIDFSEST-SDVAILANDAPYPYPAGNPVNDANGKVMKFIILK 385 (551)
Q Consensus 309 ~~g~~~~via~DG~~l~--~P~~~~~l~l~pgeR~dVlv~~~~~~-g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~ 385 (551)
+|+.|++++.||...+ .|..+|++.|.||||++++|.+.+.. -+.|.+......-. ..+-...|.|..
T Consensus 201 -HGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~--------~~GM~~~f~V~~ 271 (313)
T 3tas_A 201 -HGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHS--------DMGMVGLFLVKK 271 (313)
T ss_dssp -TTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH--------HTTCEEEEEEEC
T ss_pred -cCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHH--------HCCCeEEEEEEC
Confidence 7999999999987653 57889999999999999999876532 23777776431111 122455688876
Q ss_pred CC
Q 008840 386 NR 387 (551)
Q Consensus 386 ~~ 387 (551)
..
T Consensus 272 ~d 273 (313)
T 3tas_A 272 PD 273 (313)
T ss_dssp TT
T ss_pred CC
Confidence 54
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=317.55 Aligned_cols=219 Identities=22% Similarity=0.311 Sum_probs=180.3
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.+|++.+.+. ....++|+....||++|||+||+++||+|+|+|+|+|+. +
T Consensus 8 ~~~~l~~~~~---------~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~---------------------~ 57 (276)
T 3kw8_A 8 RHLKMYAEKL---------ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDV---------------------R 57 (276)
T ss_dssp EEEEEEEEEC---------TTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSS---------------------C
T ss_pred EEEEEEEEeC---------CCCceecceeccCCcccCCeEEEECCCEEEEEEEECCCC---------------------C
Confidence 3567666552 346678887788999999999999999999999999987 8
Q ss_pred eEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCc------------cCceeEEeccCCCch--hhhhhcc
Q 008840 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQ------------QPGNTWYHDHTMGLT--RVNLLAG 209 (551)
Q Consensus 144 t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~------------~~Gt~wYH~H~~g~t--~~qv~~G 209 (551)
++|||||+++++.+||+| +++|+|.||++| +|+|++.+ ++||||||||.++.+ ..|+++|
T Consensus 58 ~siH~HG~~~~~~~DG~~---~t~~~i~pG~~~---~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~G 131 (276)
T 3kw8_A 58 ASLHVHGLDYEISSDGTA---MNKSDVEPGGTR---TYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNG 131 (276)
T ss_dssp BCCEESSSBCCGGGSCCT---TTTCSBCTTCEE---EEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHT
T ss_pred ccEeecCcccCCccCCCc---CCcCCCCCCCEE---EEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCc
Confidence 999999999999999998 688999999999 99999975 379999999999876 5799999
Q ss_pred ceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---Cceee
Q 008840 210 LIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---PRMTV 286 (551)
Q Consensus 210 L~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---P~~~v 286 (551)
|+|+|||+++. . . .. ++|++|+++|| +|||+.+ |.+.+
T Consensus 132 l~G~liV~~~~-~-~---~~--drE~~l~l~~~--------------------------------~iNG~~~~~~p~i~v 172 (276)
T 3kw8_A 132 LYGPVIVRRKG-D-V---LP--DATHTIVFNDM--------------------------------TINNRKPHTGPDFEA 172 (276)
T ss_dssp CEEEEEEECTT-C-C---CC--SEEEEEEEETT--------------------------------EETTCCTTCCCCEEE
T ss_pred cEEEEEEecCC-C-c---cc--ccceEEEeccc--------------------------------ccceecccCCCCEEE
Confidence 99999999654 2 1 11 77888876543 5667653 67888
Q ss_pred cC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCC---CCceEecEEEEccCceEEEEEEcCC--CCCceEEEecC
Q 008840 287 RR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYL---GKPVVTNDTVLAPAEIADVVIDFSE--STSDVAILAND 360 (551)
Q Consensus 287 ~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l---~~P~~~~~l~l~pgeR~dVlv~~~~--~~g~~~~L~~~ 360 (551)
+. +++||||+|.+. ....+|| ||+.|++++ ||... ..+..+|++.|.||+++++++.+.+ .+| .|.+...
T Consensus 173 ~~G~~vri~l~N~~~-~~Hp~Hl-HG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG-~w~~HCH 248 (276)
T 3kw8_A 173 TVGDRVEIVMITHGE-YYHTFHM-HGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCH 248 (276)
T ss_dssp ETTCEEEEEEEEESS-CCEEEEE-TTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEEC
T ss_pred ecCCEEEEEEecCCC-cceeEEE-ccceeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCC-eEEEECC
Confidence 87 899999999997 4678888 899999875 77532 2346789999999999999999985 344 8888876
Q ss_pred C
Q 008840 361 A 361 (551)
Q Consensus 361 ~ 361 (551)
.
T Consensus 249 ~ 249 (276)
T 3kw8_A 249 V 249 (276)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=327.27 Aligned_cols=365 Identities=15% Similarity=0.116 Sum_probs=227.3
Q ss_pred CCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCC
Q 008840 93 SLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEK 172 (551)
Q Consensus 93 ~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~p 172 (551)
.+||++ ||+|+|++||+|+|+|+|.+.. .+++||||... .++|.|.|
T Consensus 48 ~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~---------------------~h~~~~~g~~~-----------~~~~~i~p 94 (447)
T 2dv6_A 48 DIDHKI-NPTLVVHEGETVQVNLVNGEGA---------------------QHDVVVDQYAA-----------RSAIVNGK 94 (447)
T ss_dssp GGTTCB-SCCEEEETTCEEEEEEECSSSS---------------------CBCCEETTTTE-----------ECCCBCST
T ss_pred eecCCc-CCeEEEcCCCEEEEEEEcCCCC---------------------ceEEEEccCCc-----------ccceecCC
Confidence 346999 9999999999999999999876 68999998641 35678999
Q ss_pred CCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCC----CCCCCCCcCceeEEEEEeeecCCC
Q 008840 173 GPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAP----LRLPSGDVFDRPLFVFDRNFLTNG 248 (551)
Q Consensus 173 G~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~----~~lP~~~~~e~~lvl~d~~~~~~g 248 (551)
|+++ +|.|.+. ++||||||||.++ |..+||.|.|+|+++..... ..++.. ..+++..+ |+. ...
T Consensus 95 G~~~---~~~f~~~-~~Gt~~y~~~~~~----h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~-~~~~p~~~-d~~--~~~ 162 (447)
T 2dv6_A 95 NASS---TFSFVAS-KVGEFNYYCSIAG----HRQAGMEGNIQVLPGNRAEMKSSGADITRD-PADLPGPI-GPR--QAK 162 (447)
T ss_dssp TBEE---EEEEECC-SCEEEEEECCSTT----HHHHTCEEEEEEESSCCCCCCCSSBCCBCC-TTCSCCCC-CSC--CCC
T ss_pred CCeE---EEEEEcC-CCEEEEEEeCCCC----hhhCCCEEEEEEeCCccccCCCcchhhccC-hhhcCCcc-ccC--CCc
Confidence 9999 9999997 5899999999864 67899999999997652110 000000 11111111 100 000
Q ss_pred ceEecCCCCCCCCCCCCCCccCCceEEECCcc-cCceeecC-eEEEEEEEecCC-CceEEEEEcCCceEEEEEcCCCCCC
Q 008840 249 SIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA-WPRMTVRR-RKYRFRIINASN-ARFFRFFFTNGLRFIHVGSDSAYLG 325 (551)
Q Consensus 249 ~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~-~P~~~v~~-~~~RlRllNas~-~~~~~l~l~~g~~~~via~DG~~l~ 325 (551)
...+..... . .......+...+.+++||+. .|.+++++ ++|||||+|.+. ...+.+++ ||. ++.||.+
T Consensus 163 ~~~~~l~~~-~-~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~-Hg~----~~~DG~~-- 233 (447)
T 2dv6_A 163 TVRIDLETV-E-VKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDF-HGA----TGPGGAA-- 233 (447)
T ss_dssp EEEEEEEEE-E-EEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEE-TTC----CSGGGGG--
T ss_pred EEEEEEEEE-E-EEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEee-ccc----cCCCCCC--
Confidence 000000000 0 00000012234689999996 78999987 899999999985 45677888 673 3689873
Q ss_pred CceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCC-------C
Q 008840 326 KPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEK-------L 398 (551)
Q Consensus 326 ~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~-------L 398 (551)
+.+.|+||||+++++++++. ++|+++...... + .....+-.-.+.|.... .+|.. +
T Consensus 234 -----~~~~i~pG~~~~~~~~~~~~--G~~~yh~h~~~~---~--~~~~~Gl~g~l~v~~~~-----~~P~~d~~~~~~~ 296 (447)
T 2dv6_A 234 -----AFTQTDPGEETVVTFKALIP--GIYVYHCATPSV---P--THITNGMYGLLLVEPEG-----GLPQVDREFYVMQ 296 (447)
T ss_dssp -----GGCCBCTTCEEEEEEECCSC--EEEEEECCSSSH---H--HHHHTTCEEEEEEECTT-----CSCCCSEEEEEEE
T ss_pred -----ccEEeCCCCEEEEEEECCCC--eEEEEEeCCCCh---H--HHHhCCCEEEEEEeCCC-----CCCCCCeeEEEEe
Confidence 23469999999999999864 489998754100 0 00001112234443321 12210 0
Q ss_pred CCCCCCCCccCceeeEEeeeecccCCCCcceEEEcccccCCCC---C-CCcceeeeEEEEeee-eeeeeeccccCceeee
Q 008840 399 IEYPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPV---T-ETPKTLDQTELVNLE-EFKACMNKINDAIKCN 473 (551)
Q Consensus 399 ~~~~~~~~~~~~~~r~~~l~~~~~~~g~~~~~~INg~~f~~~~---~-~~~~~~~~~~l~n~~-~~~~~~~~~~~~~~~~ 473 (551)
................+.+.... ...+..|+|||+.|.... . -.+...++|.|+|.. ...|++|.|+|.| .
T Consensus 297 ~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f--~ 372 (447)
T 2dv6_A 297 GEIYTVKSFGTSGEQEMDYEKLI--NEKPEYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIF--D 372 (447)
T ss_dssp EEECBSSCTTCCEECCBBHHHHH--TTCCSEEEETTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCE--E
T ss_pred cccccCCcccccccccCChHHhh--ccCCCEEEECCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEE--E
Confidence 00000000000000000000000 112456899999886321 1 112237889999987 4678899999855 4
Q ss_pred eeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 474 LSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 474 v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+.. .+|....++ ..|+|||.|.||+++.|+|+++ +|| |++|||+++|++.|||..|+|.
T Consensus 373 vv~-~dG~~~~~p---~~~~dtv~l~pg~r~~i~~~~~--------------~pG~~~~hch~~~h~~~Gm~~~~~v~ 432 (447)
T 2dv6_A 373 HVY-SLGSVVSPP---LIGVQTVSVPPGGATIVDFKID--------------RAGRYILVDHALSRLEHGLVGFLNVD 432 (447)
T ss_dssp EEC-GGGCSSSCC---EEEESEEEECTTEEEEEEEECC--------------SCEEEEEEESSGGGGGGTCCEEEEEC
T ss_pred EEE-cCCcccCCC---cccccEEEECCCcEEEEEEECC--------------CCEEEEEEecCcCccccCCEEEEEEe
Confidence 443 356322211 1389999999999999999987 678 9999999999999999999884
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=346.45 Aligned_cols=223 Identities=17% Similarity=0.246 Sum_probs=164.8
Q ss_pred CCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcc------eecc
Q 008840 95 TASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSW------FTAG 168 (551)
Q Consensus 95 ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~------~t~~ 168 (551)
++++|||+|||++||+|+|+|+|.|+. +|+|||||+++++.+||+|... .++|
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~~---------------------~~siH~HGl~~~~~~DG~~~~~~~~~~~~~~~ 121 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLASR---------------------PYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDN 121 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSSS---------------------CBCCEEETCC---------------------C
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCCC---------------------ceEEecCcceeCCCCCCccccCCCCcccccCc
Confidence 468999999999999999999999987 8999999999999999998621 2388
Q ss_pred ccCCCCCcceeeEEEEcCcc-----Cc----eeEEeccCCCchhhhhhccceEEEEEeCCCCCC-CCCCCCCCcCceeEE
Q 008840 169 FEEKGPTWTNETYHYHNMQQ-----PG----NTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEA-PLRLPSGDVFDRPLF 238 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~-----~G----t~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~-~~~lP~~~~~e~~lv 238 (551)
+|.||++| +|+|++.++ +| |||||||.+ +..|+++||+|+|||+++.... ...+|.. ++|++|+
T Consensus 122 ~I~PG~~~---tY~f~~~~~~gp~~~G~~c~T~wYHsH~~--~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~-~~e~~l~ 195 (647)
T 1sdd_B 122 AIQPNKTY---TYVWHATTRSGPENPGSACRAWAYYSAVN--PEKDIHSGLIGPLLICRKGTLDKETNMPVD-MREFVLL 195 (647)
T ss_dssp CBCTTCCE---ECCEECCTTTSCCSSSCSEEEEEEECCSS--HHHHHTTTCEEEEEEECTTSSCTTSCCCSS-CCEEEEE
T ss_pred ccCCCCeE---EEEEECCcccCCCCCCCCceEEEEccCCC--CcccccccCccCEEEeeCCCcccccCCCCc-ceeEEEE
Confidence 99999999 999999865 57 999999996 4679999999999999765221 1224554 6899999
Q ss_pred EEE------eeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc--CceeecC-eEEEEEEEecCCCc-eEEEEE
Q 008840 239 VFD------RNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW--PRMTVRR-RKYRFRIINASNAR-FFRFFF 308 (551)
Q Consensus 239 l~d------~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~--P~~~v~~-~~~RlRllNas~~~-~~~l~l 308 (551)
|+| |.++.++...+... ... .+..++.++|||+.+ |.+++++ ++|||||+|+++.+ .+.|||
T Consensus 196 l~~~d~~~~w~~~~~~~~~~~~~------~~~--~~~~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hl 267 (647)
T 1sdd_B 196 FMVFDEKKSWYYDKKPTRSWRRA------SSE--VKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHF 267 (647)
T ss_dssp EEEEEGGGSSCCC-----------------------CCCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEE
T ss_pred EEeecCccccccccCcccccccC------Ccc--hhhcCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEE
Confidence 995 33333322111000 000 123478999999986 8899987 89999999999875 788999
Q ss_pred cCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 309 TNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 309 ~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|||.|++|+.|| ..++++.|+||||+||+|+++++ | .|.+....
T Consensus 268 -hG~~f~vi~~d~------~~~d~v~l~pg~r~~v~~~~~~p-G-~w~~hch~ 311 (647)
T 1sdd_B 268 -HGQTLLENGTQQ------HQLGVWPLLPGSFKTLEMKASKP-G-WWLLDTEV 311 (647)
T ss_dssp -TTCCEEECSSSC------EEESSEEECTTEEEEEEEECCSS-E-EEEEECCC
T ss_pred -cCcEEEEecCCC------cccceEEECCCeEEEEEEEeccc-e-EeecccCc
Confidence 799999999885 47899999999999999999975 4 78877653
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=317.64 Aligned_cols=211 Identities=18% Similarity=0.150 Sum_probs=157.1
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcc----ee--c
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSW----FT--A 167 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~----~t--~ 167 (551)
.| ++|||+|||++||+|+|+|+|.|+. +++|||||+++++.+||+|... ++ +
T Consensus 54 ~n-~~pGP~I~v~~Gd~v~v~~~N~l~~---------------------~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~ 111 (306)
T 1sdd_A 54 TS-GLLGPTLYAEVGDIMKVHFKNKAHK---------------------PLSIHAQGIKYSKFSEGASYSDHTLPMEKMD 111 (306)
T ss_dssp SC-CSCCCCEEEETTCEEEEEEEECSSS---------------------CBCCEEESSCCCTTTSCCCSCCCCCHHHHTT
T ss_pred cC-CccCCEEEEeCCCEEEEEEEECCCC---------------------cccEeecceecccccCCCccCCCCcccccCC
Confidence 35 5999999999999999999999987 8999999999998999988521 12 5
Q ss_pred cccCCCCCcceeeEEEEcCccC---------ceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEE
Q 008840 168 GFEEKGPTWTNETYHYHNMQQP---------GNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLF 238 (551)
Q Consensus 168 ~~i~pG~~~~~~~y~f~~~~~~---------Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lv 238 (551)
|+|.||++| +|+|++.+++ ||||||||.. +..|+++||+|+|||+++......+.+...++|++|+
T Consensus 112 ~~I~PG~~~---~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~--~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~ 186 (306)
T 1sdd_A 112 DAVAPGQEY---TYEWIISEHSGPTHDDPPCLTHIYYSYVN--LVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLM 186 (306)
T ss_dssp TCBCTTCEE---EEEEECCGGGSCCSSSCSEEEEEEECCSS--SHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCB
T ss_pred CccCCCCeE---EEEEEeCCccCCCCCCCCceEEEEeccCC--chhhhccCceEEEEEccCCCCCccCCcCcccceEEEE
Confidence 899999999 9999997664 6999999974 3468999999999999764222223333347899999
Q ss_pred EEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---CceeecC-eEEEEEEEecCCC-ceEEEEEcCCce
Q 008840 239 VFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---PRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLR 313 (551)
Q Consensus 239 l~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~ 313 (551)
++|| +.+++.. ...++.++|||+.+ |.++++. +++||||+|+|+. ..+.||| ||+.
T Consensus 187 ~~d~--d~~~~~~----------------~~~~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hl-hG~~ 247 (306)
T 1sdd_A 187 FAVF--DESKSWN----------------QTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHF-NGQV 247 (306)
T ss_dssp CCEE--ETTSSSS----------------CCCCEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBC-SSTT
T ss_pred EEec--ccccccc----------------cCCCcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEE-CCcE
Confidence 9996 4433221 01267899999997 8899988 8999999999987 5667999 7999
Q ss_pred EEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 314 FIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 314 ~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
|.+ || ..+|++.|+||||+||+|+++++ | .|.+....
T Consensus 248 ~~~---dG------~~~dtv~l~pger~~v~~~~~~p-G-~~~~hch~ 284 (306)
T 1sdd_A 248 LEQ---NH------HKISAITLVSATSTTANMTVSPE-G-RWTIASLI 284 (306)
T ss_dssp CEE---TT------EECSCCCEETTCCBC---------C-CCCCBCCS
T ss_pred eee---CC------EEcceEEECCCcEEEEEEEcCCC-e-EEEEEeCC
Confidence 875 77 45899999999999999999864 4 67777654
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-36 Score=308.61 Aligned_cols=219 Identities=23% Similarity=0.335 Sum_probs=174.9
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+. ...+|+|+....||++|||+|+|++||+|+|+|+|.++. +
T Consensus 49 ~~~~l~~~~~---------~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~---------------------~ 98 (343)
T 3cg8_A 49 RHLKMYAEKL---------ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDV---------------------R 98 (343)
T ss_dssp EEEEEEEEEC---------GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSS---------------------C
T ss_pred EEEEEEEEEc---------cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCC---------------------C
Confidence 3566665542 134699987777999999999999999999999999987 7
Q ss_pred eEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCc------------cCceeEEeccCCCch--hhhhhcc
Q 008840 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQ------------QPGNTWYHDHTMGLT--RVNLLAG 209 (551)
Q Consensus 144 t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~------------~~Gt~wYH~H~~g~t--~~qv~~G 209 (551)
++|||||+++...+||+| +++|.|.||++| +|.|++.+ ++||||||||.++.. ..|+++|
T Consensus 99 ~sih~HG~~~~~~~DG~~---~t~~~I~PG~~~---~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~G 172 (343)
T 3cg8_A 99 ASLHVHGLDYEISSDGTA---MNKSDVEPGGTR---TYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNG 172 (343)
T ss_dssp BCCEESSSBCCGGGSCCT---TTTCSBCTTCEE---EEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHT
T ss_pred eeEEecCcccCCcCCCcc---cccccccCCCEE---EEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcC
Confidence 999999999998899998 578899999999 99999864 358999999997653 4799999
Q ss_pred ceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---Cceee
Q 008840 210 LIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---PRMTV 286 (551)
Q Consensus 210 L~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---P~~~v 286 (551)
|+|++||+++. +. .| ++|++|+++|| +|||+.+ |.+.+
T Consensus 173 l~G~~iV~~~~-~~---~p---d~e~~l~~~d~--------------------------------~iNG~~~~~~~~l~v 213 (343)
T 3cg8_A 173 LYGPVIVRRKG-DV---LP---DATHTIVFNDM--------------------------------TINNRKPHTGPDFEA 213 (343)
T ss_dssp CEEEEEEECTT-CC---CC---SEEEEEEEETT--------------------------------EETTCCTTCCCCEEE
T ss_pred CeEEEEEecCC-CC---CC---CceEEEEcccc--------------------------------eecccCCCCCccEEe
Confidence 99999999654 21 12 67888777654 4666653 56888
Q ss_pred cC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCC---CCceEecEEEEccCceEEEEEEcCC--CCCceEEEecC
Q 008840 287 RR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYL---GKPVVTNDTVLAPAEIADVVIDFSE--STSDVAILAND 360 (551)
Q Consensus 287 ~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l---~~P~~~~~l~l~pgeR~dVlv~~~~--~~g~~~~L~~~ 360 (551)
+. ++|||||+|.+. ....||| ||+.|+++ .||.+. ..+..+|++.|.||||++|++++.+ .+| .|.+...
T Consensus 214 ~~Ge~vri~l~N~g~-~~HpfHl-HGh~f~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG-~w~~HCH 289 (343)
T 3cg8_A 214 TVGDRVEIVMITHGE-YYHTFHM-HGHRWADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCH 289 (343)
T ss_dssp ETTCEEEEEEEEESS-CCEEEEE-TTCCEESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEEC
T ss_pred CCCCEEEEEEEcCCc-cccccEe-cCcEEEEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCe-eEEEeCC
Confidence 87 899999999996 4677888 89999997 466532 2346689999999999999999853 344 7888765
Q ss_pred C
Q 008840 361 A 361 (551)
Q Consensus 361 ~ 361 (551)
.
T Consensus 290 i 290 (343)
T 3cg8_A 290 V 290 (343)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=314.80 Aligned_cols=260 Identities=18% Similarity=0.194 Sum_probs=199.6
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
.+++.+.+....+..+. ...+|+|| |++|||+|++++||+++|+|+|.+... ..+
T Consensus 165 ~~~l~~~~~~~~~~~g~-~~~~~~~N-----G~~pgp~i~v~~G~~v~~rl~N~~~~~-------------------~~~ 219 (447)
T 2dv6_A 165 RIDLETVEVKGQLDDNT-TYTYWTFN-----GKVPGPFLRVRVGDTVELHLKNHKDSL-------------------MVH 219 (447)
T ss_dssp EEEEEEEEEEEEEETTE-EEEEEEET-----TBBSCCCEEEETTCEEEEEEEECTTCS-------------------SCB
T ss_pred EEEEEEEEEEEeccCCc-eeEEEEEC-----CccCCCeEEecCCCEEEEEEEeCCCCc-------------------eeE
Confidence 45555555555564443 56789997 999999999999999999999998631 169
Q ss_pred EEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCC
Q 008840 145 VVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAP 224 (551)
Q Consensus 145 ~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~ 224 (551)
++||||+. .+||+|+ .++ |.||+++ +|.|.++ ++||||||||.. .+..|+.+||+|+|+|+++.
T Consensus 220 ~ih~Hg~~---~~DG~~~--~~~--i~pG~~~---~~~~~~~-~~G~~~yh~h~~-~~~~~~~~Gl~g~l~v~~~~---- 283 (447)
T 2dv6_A 220 SVDFHGAT---GPGGAAA--FTQ--TDPGEET---VVTFKAL-IPGIYVYHCATP-SVPTHITNGMYGLLLVEPEG---- 283 (447)
T ss_dssp CCEETTCC---SGGGGGG--GCC--BCTTCEE---EEEEECC-SCEEEEEECCSS-SHHHHHHTTCEEEEEEECTT----
T ss_pred EEeecccc---CCCCCCc--cEE--eCCCCEE---EEEEECC-CCeEEEEEeCCC-ChHHHHhCCCEEEEEEeCCC----
Confidence 99999986 4789886 333 8999999 9999997 689999999984 46679999999999999543
Q ss_pred CCCCCCCcCceeEEEEEeeecCC----CceEecCCCCCCCCCCCCCCccCCceEEECCcccC-----ceeecC-eEEEEE
Q 008840 225 LRLPSGDVFDRPLFVFDRNFLTN----GSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP-----RMTVRR-RKYRFR 294 (551)
Q Consensus 225 ~~lP~~~~~e~~lvl~d~~~~~~----g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P-----~~~v~~-~~~RlR 294 (551)
.+|.. ++|++++++||....+ |...+.. ....+..++.++|||+.++ .+++++ ++||||
T Consensus 284 -~~P~~-d~~~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlr 352 (447)
T 2dv6_A 284 -GLPQV-DREFYVMQGEIYTVKSFGTSGEQEMDY---------EKLINEKPEYFLFNGSVGSLTRSHPLYASVGETVRIF 352 (447)
T ss_dssp -CSCCC-SEEEEEEEEEECBSSCTTCCEECCBBH---------HHHHTTCCSEEEETTSTTCCCCCCCEEECTTCEEEEE
T ss_pred -CCCCC-CeeEEEEecccccCCcccccccccCCh---------HHhhccCCCEEEECCcccCCCCCcceEECCCCEEEEE
Confidence 24553 7888899999864322 1110000 0001224679999999986 578888 899999
Q ss_pred EEecCCCceEEEEEcCCceEEEEEcCCCCCCCce-EecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCC
Q 008840 295 IINASNARFFRFFFTNGLRFIHVGSDSAYLGKPV-VTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVND 373 (551)
Q Consensus 295 llNas~~~~~~l~l~~g~~~~via~DG~~l~~P~-~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~ 373 (551)
|+|++..+.+.||| +||.|+||+.||++++.|. .+|++.|+||||+||+|+++++ | .|.|+.......
T Consensus 353 liN~~~~~~h~~hl-hGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~p-G-~~~~hch~~~h~-------- 421 (447)
T 2dv6_A 353 FGVGGPNFTSSFHV-IGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDRA-G-RYILVDHALSRL-------- 421 (447)
T ss_dssp EEEEESSCCEEEEE-ETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECCSC-E-EEEEEESSGGGG--------
T ss_pred EEeCCCCceEeEEE-cCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECCCC-E-EEEEEecCcCcc--------
Confidence 99999888899999 6999999999999997777 6899999999999999999974 4 899887643211
Q ss_pred CCCceEEEEEccCC
Q 008840 374 ANGKVMKFIILKNR 387 (551)
Q Consensus 374 ~~~~vm~f~v~~~~ 387 (551)
..+.++.|+|.+..
T Consensus 422 ~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 422 EHGLVGFLNVDGPK 435 (447)
T ss_dssp GGTCCEEEEECSCS
T ss_pred ccCCEEEEEEeCCC
Confidence 12346778886543
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=328.18 Aligned_cols=257 Identities=17% Similarity=0.173 Sum_probs=189.6
Q ss_pred eeEEEEEEEEEEeecCCCC-----------------CccEEEeecCCC-----------CCCCCCcEEEEECCCEEEEEE
Q 008840 64 KKLEIGMFEKKWKFHRDLP-----------------PTPVFAFGTSSL-----------TASVPGPTIEALHGIDTYVTW 115 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~-----------------~~~~~~y~~~~~-----------ng~~PGPti~v~~Gd~v~v~l 115 (551)
.+|.|.+.+..|.+.++.. ..-.+.|..... +.++|||+|||++||+|+|+|
T Consensus 134 r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v~v~~ 213 (770)
T 2r7e_B 134 RHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNIMVTF 213 (770)
T ss_dssp EEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCEEEEE
T ss_pred EEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEEEEEE
Confidence 4788889999998877652 112345653322 237999999999999999999
Q ss_pred EeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCC-CCCCcceeccccCCCCCcceeeEEEEcCc-------
Q 008840 116 QNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESD-GYAKSWFTAGFEEKGPTWTNETYHYHNMQ------- 187 (551)
Q Consensus 116 ~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~D-G~p~~~~t~~~i~pG~~~~~~~y~f~~~~------- 187 (551)
+|.|+. +++|||||++++..+| |+|. ++|+|.||++| +|+|.+.+
T Consensus 214 ~N~l~~---------------------~~siH~HG~~~~~~~~dG~~~---~~~~I~PG~~~---tY~f~~~~~~gp~~~ 266 (770)
T 2r7e_B 214 RNQASR---------------------PYSFYSSLISYEEDQRQGAEP---RKNFVKPNETK---TYFWKVQHHMAPTKD 266 (770)
T ss_dssp ECCSSS---------------------CCCCCBTTCCCCCCSSSCTTT---TSSCCCSSCEE---EEECCCCSSSSCCSS
T ss_pred EECCCC---------------------CcceeecccccccccCCCCcC---ccCccCCCCeE---EEEEEecCccCCccC
Confidence 999987 8999999999998876 9875 67899999999 99999975
Q ss_pred --cCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCC----CCCCCC
Q 008840 188 --QPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNST----GNNPSI 261 (551)
Q Consensus 188 --~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~----g~~~~~ 261 (551)
++||||||||.+. ..|+++||+|+|||+++....+...+...++|++|+++++ +++++.+.... -..+..
T Consensus 267 d~~~Gt~wYHsh~~~--~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~--de~~swy~~~~~~~~~~~p~~ 342 (770)
T 2r7e_B 267 EFDCKAWAYSSDVDL--EKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIF--DETKSWYFTENMERNCRAPCN 342 (770)
T ss_dssp CCSEEEEEECCCSSS--SHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEE--CCSSSSCTTGGGSSCSCCSSC
T ss_pred CCCCeeEEeeccCCc--HHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeec--CccccchhccchhhcccCccc
Confidence 8999999999975 3489999999999997652211111222378999888764 33333221100 000100
Q ss_pred CCCCCCc--cCCceEEECCccc---CceeecC-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEE
Q 008840 262 HPQWQPE--YFGDVIVVNGKAW---PRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTV 334 (551)
Q Consensus 262 ~~~~~~~--~~gd~~lVNG~~~---P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~ 334 (551)
.....+. ..++.++|||+.+ |.+.++. ++|||||+|++.. ..+.||| |||.|+|++.||. .+|++.
T Consensus 343 ~~~~d~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHl-hGh~f~Vv~~dg~------~~Dtv~ 415 (770)
T 2r7e_B 343 IQMEDPTFKENYRFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHF-SGHVFTVRKKEEY------KMALYN 415 (770)
T ss_dssp CCSSSSSSTTTSCEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEB-SSCCEECCSSSCC------EESEEE
T ss_pred cccCCccccccCCccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEE-cCCEEEEEecCCc------eeeEEE
Confidence 0000011 1246789999986 5678887 8999999999864 3678888 7999999999973 789999
Q ss_pred EccCceEEEEEEcCCCCCceEEEecC
Q 008840 335 LAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 335 l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
|.||||++|+|+++++ | .|.|...
T Consensus 416 l~Pg~~~~v~~~ad~p-G-~w~~hcH 439 (770)
T 2r7e_B 416 LYPGVFETVEMLPSKA-G-IWRVECL 439 (770)
T ss_dssp CCTTCCCEEEECCSSC-B-CCCBCCC
T ss_pred ECCCeEEEEEEEeCCC-C-ceEEEec
Confidence 9999999999999875 4 5655543
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-33 Score=323.83 Aligned_cols=357 Identities=14% Similarity=0.108 Sum_probs=224.7
Q ss_pred CCCCCCC--cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC---CCCCCCCcceecc
Q 008840 94 LTASVPG--PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP---ESDGYAKSWFTAG 168 (551)
Q Consensus 94 ~ng~~PG--Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~---~~DG~p~~~~t~~ 168 (551)
+||++|| |+|++.+||+|.+++.|. .+.+||||+++.. .+||.+. .| |
T Consensus 623 iNG~~~g~~P~l~~~~gd~v~~~v~~~------------------------g~~~~~Hgl~~~g~t~~~dG~~~--~t-~ 675 (1065)
T 2j5w_A 623 MNGFMYGNQPGLTMCKGDSVVWYLFSA------------------------GNEADVHGIYFSGNTYLWRGERR--DT-A 675 (1065)
T ss_dssp ETTBCTTCCCCCEEETTCCEEEEEECC------------------------CSTTCCEEEEETTCCEEETTEEE--SE-E
T ss_pred EeeEecCCCCceEEeCCCEEEEEEEcC------------------------CCcceEEeeEEeCCceeecCeec--ce-E
Confidence 4799999 889999999999999974 3558999998776 3899986 45 8
Q ss_pred ccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEE----EEeee
Q 008840 169 FEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFV----FDRNF 244 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl----~d~~~ 244 (551)
+|.||.++ +|+|.++ ++||||||||.. .|..+||.|.|+|+++. .....+. .++.|.+++| +||..
T Consensus 676 ~i~pg~~~---t~~~~~~-~~Gt~~~h~h~~----~~~~~Gm~g~~~V~~~~-~~~~~~~-~yd~e~~~~iaa~~~dW~~ 745 (1065)
T 2j5w_A 676 NLFPQTSL---TLHMWPD-TEGTFNVECLTT----DHYTGGMKQKYTVNQCR-RQSEDST-FYLGERTYYIAAVEVEWDY 745 (1065)
T ss_dssp EECTTCEE---EEEECCC-SCEEEEEEECSH----HHHHTTCEEEEEEECCS-CCCSCCC-CCSEEEEEEEEEEEEEEES
T ss_pred eecCCceE---EEEEecC-CCeEEEEecCCC----cccCCCcEEEEEEcCCc-cccCCcc-CCCcceEEEEeeeeccccC
Confidence 99999999 9999997 999999999984 37789999999999764 2122222 2366888999 89976
Q ss_pred cCCCceEe---cCCCCCCCC-----CC-CCCC--------ccCCceEEE----------CCcccCceeecC-eEEEEEEE
Q 008840 245 LTNGSIYM---NSTGNNPSI-----HP-QWQP--------EYFGDVIVV----------NGKAWPRMTVRR-RKYRFRII 296 (551)
Q Consensus 245 ~~~g~~~~---~~~g~~~~~-----~~-~~~~--------~~~gd~~lV----------NG~~~P~~~v~~-~~~RlRll 296 (551)
.....+.. +..+..+.. .. .+.. ++.+..+++ -+..-|.|.++. +++|+|+.
T Consensus 746 ~~~~~~~~~~~~~~~~~p~~~~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~ 825 (1065)
T 2j5w_A 746 SPQREWEKELHHLQEQNVSNAFLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFK 825 (1065)
T ss_dssp CSCCHHHHHHHHHHTCCCCCTTTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEE
T ss_pred CcchhhhhhccCCCccCccceeecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEE
Confidence 54442110 000110100 00 0000 001112223 122347899987 89999999
Q ss_pred ecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCC--------ceEEEecCCCC--CCC
Q 008840 297 NASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTS--------DVAILANDAPY--PYP 366 (551)
Q Consensus 297 Nas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g--------~~~~L~~~~~~--~~~ 366 (551)
|.. .+.+.++. ||. .+... |. ..+.||+++...+...+..| ++|+....... ...
T Consensus 826 N~~-~~~~sih~-HGl--~~~~~-~~----------~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~ 890 (1065)
T 2j5w_A 826 NMA-TRPYSIHA-HGV--QTESS-TV----------TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLY 890 (1065)
T ss_dssp ECS-SSCBCCEE-SSC--BCSCS-CC----------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHH
T ss_pred eCC-CCCceEee-ccc--cccCC-CC----------ceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhh
Confidence 996 45677877 673 33322 21 24679999777777654322 26666654321 000
Q ss_pred CCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc---------------------cCC-
Q 008840 367 AGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT---------------------SNT- 424 (551)
Q Consensus 367 ~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~---------------------~~~- 424 (551)
.| -.-.+.|..... +. ... ........+.+..+. ...
T Consensus 891 ~G--------L~G~liV~~~~~-----l~--~~~------~~~d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~v~~~~ 949 (1065)
T 2j5w_A 891 SG--------LIGPLIVCRRPY-----LK--VFN------PRRKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDD 949 (1065)
T ss_dssp TT--------CEEEEEEECCC------------C------CCCEEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTC
T ss_pred cc--------ccceeEecCccc-----cc--ccC------CCcceEEEEEEEeecCCcceeeccCcccccCCccccCcch
Confidence 11 111133322110 00 000 000000101010000 000
Q ss_pred ----CCcceEEEcccccCCCCCCCcc--eeeeEEEEeee--eeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccE
Q 008840 425 ----GKPTHLLINAKTLEDPVTETPK--TLDQTELVNLE--EFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVY 496 (551)
Q Consensus 425 ----g~~~~~~INg~~f~~~~~~~~~--~~~~~~l~n~~--~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV 496 (551)
.....|+|||+.|+.......+ .+++|.+.|.. ...|++|.|+|.| .+.. .| +.|||||
T Consensus 950 ~~~~~~~~~~~iNG~~~~~~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F--~vv~--~~---------p~~~DTv 1016 (1065)
T 2j5w_A 950 EEFIESNKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSF--QYKH--RG---------VYSSDVF 1016 (1065)
T ss_dssp HHHHHHTEEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCE--EETT--TT---------CEEESEE
T ss_pred hhhhccCceEEECCccCCCCccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEE--EEEe--cC---------CceeeEE
Confidence 0112489999999753221121 28899999973 5789999999855 3422 11 4799999
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.|+||++++|+|+|+ +|| ||||||+++|+|.|||+.|+|.
T Consensus 1017 ~v~pg~~~~v~~~ad--------------~pG~w~~HCH~~~H~~~GM~~~~~V~ 1057 (1065)
T 2j5w_A 1017 DIFPGTYQTLEMFPR--------------TPGIWLLHCHVTDHIHAGMETTYTVL 1057 (1065)
T ss_dssp EECTTCEEEEEECCC--------------SCEEEEEEECCHHHHHTTCEEEEEEE
T ss_pred EECCCCeEEEEEECC--------------CCeeEEEEeCCHHHHhcCCcEEEEEe
Confidence 999999999999887 788 9999999999999999999986
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=306.28 Aligned_cols=224 Identities=18% Similarity=0.215 Sum_probs=164.3
Q ss_pred CCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCC-----CCCcceeccc
Q 008840 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDG-----YAKSWFTAGF 169 (551)
Q Consensus 96 g~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG-----~p~~~~t~~~ 169 (551)
..+|||+||+++||+|+|+++|+|+. +++|||||+++... +|| ++. +++|+
T Consensus 447 ~g~pGP~Ir~~~GD~v~v~~~N~l~~---------------------~~siHwHGl~~~~~~~DG~~~~G~~~--~~~~~ 503 (742)
T 2r7e_A 447 SGILGPLLYGEVGDTLLIIFKNQASR---------------------PYNIYPHGITDVRPLYSRRLPKGVKH--LKDFP 503 (742)
T ss_dssp SCSCCCCCCCBTTCEEECCEECCSSS---------------------CBCCEETTCSEECCTTCSCCSSSCSS--TTTSC
T ss_pred cCCCCCeEEEECCCEEEEEEEeCCCC---------------------CcCEEecccccCCcccccccCCCCcc--ccccc
Confidence 46899999999999999999999997 89999999997554 565 444 67899
Q ss_pred cCCCCCcceeeEEEEcCccCc---------eeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEE
Q 008840 170 EEKGPTWTNETYHYHNMQQPG---------NTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVF 240 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~G---------t~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~ 240 (551)
|.||++| +|+|++.+++| |||||||.+. ..|+++||+|+|||+++....+.+.|...++|++|+++
T Consensus 504 I~PG~t~---tY~f~~~~~agPg~~d~~~gT~wYHsH~~~--~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~ 578 (742)
T 2r7e_A 504 ILPGEIF---KYKWTVTVEDGPTKSDPRCLTRYYSSFVNM--ERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFS 578 (742)
T ss_dssp CBSSCEE---CCEEECCSTTSCCSSSCSCCCCEEECCSSS--SSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEEC
T ss_pred CCCCCeE---EEEEEeccccCCcccCCCceEEEEecCcch--hhhhhccceeeEEEcCccccccccCcCCCCceEEEEee
Confidence 9999999 99999976655 9999999975 35899999999999965422233334444889999998
Q ss_pred EeeecCCCceEecC----CCCCCCCCCCCCCcc--CCceEEECCcccCc--eeecC-eEEEEEEEecCC-CceEEEEEcC
Q 008840 241 DRNFLTNGSIYMNS----TGNNPSIHPQWQPEY--FGDVIVVNGKAWPR--MTVRR-RKYRFRIINASN-ARFFRFFFTN 310 (551)
Q Consensus 241 d~~~~~~g~~~~~~----~g~~~~~~~~~~~~~--~gd~~lVNG~~~P~--~~v~~-~~~RlRllNas~-~~~~~l~l~~ 310 (551)
++ +++.+.+... ....+.....-.+.+ ....++|||+.+.. +.++. ++|||||+|++. ...+.||| +
T Consensus 579 ~f--de~~~wy~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~ING~~~~~~~l~v~~Ge~vr~rliN~g~~~~~h~~Hl-h 655 (742)
T 2r7e_A 579 VF--DENRSWYLTENIQRFLPNPAGVQLEDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFF-S 655 (742)
T ss_dssp BC--CGGGSSCSHHHHHHHSSSSSCSCCCCHHHHGGGCCBCTTTTCSSCCCCCCCSSCCCEEEEEECSSCCCCCCCEE-S
T ss_pred cc--ccccccccccchhhcccCchhcccccccccccCceeeecCcCCCCCcEEEeCCCEEEEEEEeCCCCcceEEEEE-c
Confidence 74 3333322100 000000000000001 12357899997532 77877 899999999775 44577888 7
Q ss_pred CceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 311 GLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 311 g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
||.|+++ +..+|++.|.||||++|+|.++++ | .|.+....
T Consensus 656 Gh~f~v~---------~~~~Dtv~l~Pg~~~~v~~~ad~p-G-~w~~hcH~ 695 (742)
T 2r7e_A 656 GYTFKHK---------MVYEDTLTLFPFSGETVFMSMENP-G-LWILGCHN 695 (742)
T ss_dssp SSCCCCB---------SSSBCSSCCCCCSSEECCEECCCC-C-CSCCEECC
T ss_pred CcEEEEe---------ccceeEEEECCCcEEEEEEEcCCC-e-EEEEEeCC
Confidence 9999987 456899999999999999999875 4 67776653
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.84 E-value=9e-21 Score=196.22 Aligned_cols=219 Identities=12% Similarity=0.137 Sum_probs=143.7
Q ss_pred ECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCC---
Q 008840 276 VNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES--- 350 (551)
Q Consensus 276 VNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~--- 350 (551)
+||+. -|.|+++. +++|+||.|..... +.||. ||..+. .+.||.++. ...|.|||+++..+++.++
T Consensus 70 ~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~-~sih~-HG~~~~-~~~DG~~~t------~~~I~PG~~~~y~f~~~~pg~~ 140 (343)
T 3cg8_A 70 GKASVPGPLIEVNEGDTLHIEFTNTMDVR-ASLHV-HGLDYE-ISSDGTAMN------KSDVEPGGTRTYTWRTHKPGRR 140 (343)
T ss_dssp TCCBSSCCCEEEETTCEEEEEEEECSSSC-BCCEE-SSSBCC-GGGSCCTTT------TCSBCTTCEEEEEEECCCCEEC
T ss_pred CCCCccCCEEEEECCCEEEEEEEECCCCC-eeEEe-cCcccC-CcCCCcccc------cccccCCCEEEEEEEeCCCCcc
Confidence 47775 49999988 89999999999654 45888 798776 689999852 4568999999999988754
Q ss_pred --------CCceEEEecCCCCCCCCCCCCCCCCCceEE-EEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc
Q 008840 351 --------TSDVAILANDAPYPYPAGNPVNDANGKVMK-FIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT 421 (551)
Q Consensus 351 --------~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~-f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~ 421 (551)
..++|+-.+..... ..+ .......+.. +.|.... + .. ++ +++.+.-.
T Consensus 141 ~~g~~~~~~~Gt~~YH~h~~~~-~~~--~~~~~~Gl~G~~iV~~~~--~--~~--------------pd--~e~~l~~~- 196 (343)
T 3cg8_A 141 DDGTWRPGSAGYWHYHDHVVGT-EHG--TGGIRNGLYGPVIVRRKG--D--VL--------------PD--ATHTIVFN- 196 (343)
T ss_dssp TTSCEECCSCEEEEEECSSSSS-TTC--HHHHHHTCEEEEEEECTT--C--CC--------------CS--EEEEEEEE-
T ss_pred cccccCCCCceEEEEecCcccc-ccc--hhhhhcCCeEEEEEecCC--C--CC--------------CC--ceEEEEcc-
Confidence 11345444432100 000 0000011222 3333221 1 00 11 33333211
Q ss_pred cCCCCcceEEEcccccCCCCCCC--cceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeC
Q 008840 422 SNTGKPTHLLINAKTLEDPVTET--PKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKIT 499 (551)
Q Consensus 422 ~~~g~~~~~~INg~~f~~~~~~~--~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~ 499 (551)
.|+|||+.|....... ....++|.++|.....|++|.|+|.| .+. .+|.... +..+..|||||.|.
T Consensus 197 -------d~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f--~v~--~~G~~~~-p~~~~~~~Dtv~v~ 264 (343)
T 3cg8_A 197 -------DMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRW--ADN--RTGILTG-PDDPSRVIDNKITG 264 (343)
T ss_dssp -------TTEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCE--ESS--SSSSCCS-TTCCCCEESEEEEC
T ss_pred -------cceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEE--EEe--ccCcccC-CCCcccceeeEEeC
Confidence 2799999875421111 11278899999998899999999955 342 2342111 23456899999999
Q ss_pred CCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 500 PGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 500 pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
||++++|+++|+. .++|| ||||||+++|++.|||+.|+|.
T Consensus 265 PG~~~~v~~~~~~-----------~~~pG~w~~HCHi~~H~~~GM~g~~~V~ 305 (343)
T 3cg8_A 265 PADSFGFQIIAGE-----------GVGAGAWMYHCHVQSHSDMGMVGLFLVK 305 (343)
T ss_dssp TTCEEEEEEETTT-----------TTCSEEEEEEECSHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEEEECC-----------CCCCeeEEEeCCCHHHHhccCcEEEEEe
Confidence 9999999998852 12788 9999999999999999999985
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.4e-19 Score=182.27 Aligned_cols=226 Identities=12% Similarity=0.159 Sum_probs=150.5
Q ss_pred CceEEECCc-ccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEc---CCCCCCCceEecEEEEccCceEEEEE
Q 008840 271 GDVIVVNGK-AWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGS---DSAYLGKPVVTNDTVLAPAEIADVVI 345 (551)
Q Consensus 271 gd~~lVNG~-~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~---DG~~l~~P~~~~~l~l~pgeR~dVlv 345 (551)
.+.+++||+ ..|.|.++. +++|+||+|.+.. ...||. || +.+.+. ||.+. +....|+||||+++.+
T Consensus 23 ~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~-~~siH~-HG--~~~~~~~~~DGvp~-----vtq~~I~PG~~~~y~f 93 (339)
T 2zwn_A 23 YKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSL-PHTIHW-HG--VHQKGTWRSDGVPG-----VTQQPIEAGDSYTYKF 93 (339)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEEESSS-CBCCEE-ET--CCCTTCGGGSCCBT-----TTBCCBCTTCEEEEEE
T ss_pred EEEEEECCccCCCeEEEECCCEEEEEEEECCCC-CccEEe-CC--CCcCCCcccCCCCc-----cccCccCCCCeEEEEE
Confidence 468999999 589999988 8999999999964 356766 45 556664 99863 3456799999999999
Q ss_pred EcCCCCCceEEEecCCCC--CCC-CCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeeccc
Q 008840 346 DFSESTSDVAILANDAPY--PYP-AGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTS 422 (551)
Q Consensus 346 ~~~~~~g~~~~L~~~~~~--~~~-~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~ 422 (551)
++++ + ++|+..+.... +.. .| -.-.+.|.... ...++ ....++..+.|.++..
T Consensus 94 ~~~~-~-Gt~wyH~H~~~~~q~~~~G--------l~G~liV~p~~---~~~~~-----------~~~d~e~~l~l~d~~~ 149 (339)
T 2zwn_A 94 KADR-I-GTLWYHCHVNVNEHVGVRG--------MWGPLIVDPKQ---PLPIE-----------KRVTKDVIMMMSTWES 149 (339)
T ss_dssp ECCS-C-EEEEEECCSSHHHHTTTSC--------CEEEEEEECSS---CCTTG-----------GGCSEEEEEEEEEECG
T ss_pred ECCC-C-EEEEEEecCCchhhhhcCC--------ceEeEEecCCC---ccccc-----------ccCCceEEEEeeheec
Confidence 9874 3 48998875421 111 11 11123343221 11111 1112222333332210
Q ss_pred ----C---CC----CcceEEEcccccCCCC--CCCcceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcC
Q 008840 423 ----N---TG----KPTHLLINAKTLEDPV--TETPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHE 489 (551)
Q Consensus 423 ----~---~g----~~~~~~INg~~f~~~~--~~~~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e 489 (551)
. .+ .+..|+|||+.|.... .-.+...+.|.++|.....|++|.|+|.| .+.. .+|... ..
T Consensus 150 ~~~~~~~~~g~~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f--~vi~-~DG~~~----~~ 222 (339)
T 2zwn_A 150 AVADKYGEGGTPMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDM--LVTH-KDGLPL----DS 222 (339)
T ss_dssp GGTTCTTCCCSTTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSSCEEEEETTCCE--EEEE-ETTEEE----EE
T ss_pred ccccccCCCCCCccccceEEEccccCCCcccEEECCCCEEEEEEEeCCCceEEEEECCcEE--EEEE-eCCeec----CC
Confidence 0 01 2346899999986431 11122378899999988889999999865 4433 356322 12
Q ss_pred CCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccc------cccCcccceEEc
Q 008840 490 QGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDH------EDNIMMRPLKLI 550 (551)
Q Consensus 490 ~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~H------ED~GMM~~~~V~ 550 (551)
+.|+|||.|.||+++.|+++|+ +|| |++|||+++| ++.|||..|+|.
T Consensus 223 p~~~dtv~l~pg~r~~v~~~~~--------------~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~ 276 (339)
T 2zwn_A 223 PYYADTVLVSPGERYDVIIEAD--------------NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYD 276 (339)
T ss_dssp EEEESEEEECTTCEEEEEEECC--------------SCSEEEEEECCGGGSCBTTBSSCSSEEEEEET
T ss_pred CcEEEEEEECCCCEEEEEEEeC--------------CCeeEEEEEechhhcccccccCCCcEEEEEEC
Confidence 4689999999999999999987 667 9999999999 899999998874
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.8e-19 Score=180.35 Aligned_cols=229 Identities=13% Similarity=0.177 Sum_probs=149.8
Q ss_pred ceEEECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEE-EEEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFI-HVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~-via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..+++||+. -|.|.++. +++++|+.|... ....+|+ ||.... ....||.+- +....|+|||+++..++++
T Consensus 23 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~siH~-HG~~~~~~~~~DG~p~-----~t~~~i~PG~~~~y~f~~~ 95 (318)
T 3g5w_A 23 HTFAFNGQVPAPLIHVMEGDDVTVNVTNMTT-LPHTIHW-HGMLQRGTWQSDGVPH-----ATQHAIEPGDTFTYKFKAE 95 (318)
T ss_dssp EEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBCCEE-ETCCCTTCGGGSCCBT-----TTBCCBCTTCEEEEEEECC
T ss_pred EEEEECCccCCceEEEeCCCEEEEEEEeCCC-CceeEEe-cCcCCCCCcccCCCcc-----cccccCCCCCEEEEEEEcC
Confidence 589999985 68999988 899999999874 4567888 686543 236799764 2346789999999999987
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeeccc----C-
Q 008840 349 ESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTS----N- 423 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~----~- 423 (551)
+. ++|+-.+......... ..+-.-.|.|.... ...++ ....+...+.+.++.. .
T Consensus 96 ~~--Gt~wYH~H~~~~~~~~-----~~Gl~G~lIV~~~~---~~~~~-----------~~~d~e~~l~l~dw~~~~~~~~ 154 (318)
T 3g5w_A 96 PA--GTMWYHCHVNVNEHVT-----MRGMWGPLIVEPKN---PLPIE-----------KTVTKDYILMLSDWVSSWANKP 154 (318)
T ss_dssp SC--EEEEEECCSSHHHHHH-----HSCCEEEEEEECSS---CCHHH-----------HTCCEEEEEEEEEECGGGTTCT
T ss_pred CC--EEEEEEccCChhhhhc-----cCCCEEEEEEcCCC---ccccc-----------ccccceeEEEEEeecccccccc
Confidence 53 4888776542110000 01112234443321 00000 0112222333333211 0
Q ss_pred --CC----CcceEEEcccccCCCCC--CCcceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCcc
Q 008840 424 --TG----KPTHLLINAKTLEDPVT--ETPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNV 495 (551)
Q Consensus 424 --~g----~~~~~~INg~~f~~~~~--~~~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDT 495 (551)
.+ .+..|+|||+.|..... -.+...++|+++|.....|++|.|+|.| .+.. .+|... .++.||||
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f--~vi~-~dG~~~----~~p~~~dt 227 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHIS--QIAF-KDGFPL----DKPIKGDT 227 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSSCEEEEETTSCE--EEEE-ETTEEE----EEEEEESE
T ss_pred ccCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCceEEEEECCcEE--EEEe-cCCccc----CCCccccE
Confidence 11 23469999999875321 1122378899999988789999999965 4433 355321 13458999
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccccccc------CcccceEE
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDN------IMMRPLKL 549 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~------GMM~~~~V 549 (551)
|.|.||++++|+++++ +|| |+||||+++|+++ |||..|+|
T Consensus 228 v~l~pger~~v~~~a~--------------~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~ 274 (318)
T 3g5w_A 228 VLIGPGERYDVILNMD--------------NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEY 274 (318)
T ss_dssp EEECTTCEEEEEEECC--------------SCSEEEEEESSGGGSCBTTBSSCBSEEEEEE
T ss_pred EEECCCCEEEEEEECC--------------CCeeEEEEeccHHHhhccCcCCCCCEEEEEE
Confidence 9999999999999987 678 9999999999994 78888876
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=9e-19 Score=175.99 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=145.1
Q ss_pred EEECCcc-cCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCC-
Q 008840 274 IVVNGKA-WPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES- 350 (551)
Q Consensus 274 ~lVNG~~-~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~- 350 (551)
...||+. -|.|.++. +++++++.|.. .....+|. ||..+.- ..||..+ ..-.|.||+++...+++.+.
T Consensus 27 ~~~ng~~pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~-HG~~~~~-~~DG~~~------t~~~i~pG~~~~Y~f~~~~~~ 97 (276)
T 3kw8_A 27 EKGKASVPGPLIEVNEGDTLHIEFTNTM-DVRASLHV-HGLDYEI-SSDGTAM------NKSDVEPGGTRTYTWRTHKPG 97 (276)
T ss_dssp STTCCBSSCCCEEEETTCEEEEEEEECS-SSCBCCEE-SSSBCCG-GGSCCTT------TTCSBCTTCEEEEEEECCCCE
T ss_pred eccCCcccCCeEEEECCCEEEEEEEECC-CCCccEee-cCcccCC-ccCCCcC------CcCCCCCCCEEEEEEEcCCcc
Confidence 3468874 69999987 89999999997 45567888 7866543 5899863 34568999999999988752
Q ss_pred ----------CCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeec
Q 008840 351 ----------TSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEY 420 (551)
Q Consensus 351 ----------~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~ 420 (551)
..++|+-.+..... ..+ ......+-.-.|.|..+.. + . .+ |++.+.-
T Consensus 98 ~~~~g~~~~~~~gt~~YH~h~~~~-~~~-~~~~~~Gl~G~liV~~~~~-----~----~---------~d--rE~~l~l- 154 (276)
T 3kw8_A 98 RRDDGTWRPGSAGYWHYHDHVVGT-EHG-TGGIRNGLYGPVIVRRKGD-----V----L---------PD--ATHTIVF- 154 (276)
T ss_dssp ECTTSCEECCSCEEEEEECSSSSS-TTC-HHHHHHTCEEEEEEECTTC-----C----C---------CS--EEEEEEE-
T ss_pred ccccCccCCCCCEEEEEecCcccc-ccc-hhhhhCccEEEEEEecCCC-----c----c---------cc--cceEEEe-
Confidence 12366666543110 000 0000111222344443211 0 0 02 3343321
Q ss_pred ccCCCCcceEEEcccccCCCCCCCc--ceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEe
Q 008840 421 TSNTGKPTHLLINAKTLEDPVTETP--KTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKI 498 (551)
Q Consensus 421 ~~~~g~~~~~~INg~~f~~~~~~~~--~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v 498 (551)
..|+|||+.|+....... ...++|.+.|.....|++|.|+|.| .+. .+|... .+.....|||||.|
T Consensus 155 -------~~~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f--~v~--~~G~~~-~p~~~~~~~Dtv~v 222 (276)
T 3kw8_A 155 -------NDMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRW--ADN--RTGILT-GPDDPSRVIDNKIT 222 (276)
T ss_dssp -------ETTEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCE--ESS--SSSSCC-STTCCCCEESEEEE
T ss_pred -------cccccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEcccee--EEe--ccCccC-CCcccccCCccEEe
Confidence 127999999874211111 1267899999988899999999855 332 244211 12234579999999
Q ss_pred CCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 499 TPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 499 ~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
.||++++++++++.. ++|| |+||||+++|++.|||+.|+|.+
T Consensus 223 ~pg~~~~~~~~~~~~-----------~npG~w~~HCH~~~H~~~GM~g~~~V~~ 265 (276)
T 3kw8_A 223 GPADSFGFQIIAGEG-----------VGAGAWMYHCHVQSHSDMGMVGLFLVKK 265 (276)
T ss_dssp CTTCEEEEEEETTTT-----------TCSEEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred CCCceEEEEEEeccC-----------CCCCeEEEECCCchHhhCCCeEEEEEeC
Confidence 999999998888621 2688 99999999999999999999863
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.3e-19 Score=182.93 Aligned_cols=226 Identities=11% Similarity=0.064 Sum_probs=133.2
Q ss_pred eEEECCcccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCC---ceEecEEEEccCceEEEEEEcC
Q 008840 273 VIVVNGKAWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGK---PVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 273 ~~lVNG~~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~---P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..++||...|.|.++. +++|+||.|.. .+.+.||. ||..+ ..+.||.+... ++......|+||||++..++++
T Consensus 51 ~~~~n~~pGP~I~v~~Gd~v~v~~~N~l-~~~~siH~-HGl~~-~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 51 QSRTSGLLGPTLYAEVGDIMKVHFKNKA-HKPLSIHA-QGIKY-SKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CCSSCCSCCCCEEEETTCEEEEEEEECS-SSCBCCEE-ESSCC-CTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred ccccCCccCCEEEEeCCCEEEEEEEECC-CCcccEee-cceec-ccccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 4568999999999988 89999999976 46678888 68664 23589987632 2333457899999999999998
Q ss_pred CCCC--------ceEEEecCCCC--CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeee
Q 008840 349 ESTS--------DVAILANDAPY--PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMY 418 (551)
Q Consensus 349 ~~~g--------~~~~L~~~~~~--~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~ 418 (551)
+.+| ++|+..+.... +...| -.-.+.|......+....|. . ..++..+.+.
T Consensus 128 ~~~gp~~~d~~~GT~wYHsH~~~~~q~~~G--------L~G~liV~~~~~~~~~~~~~---~--------~d~e~~l~~~ 188 (306)
T 1sdd_A 128 EHSGPTHDDPPCLTHIYYSYVNLVEDFNSG--------LIGPLLICKKGTLTEDGTQK---M--------FEKQHVLMFA 188 (306)
T ss_dssp GGGSCCSSSCSEEEEEEECCSSSHHHHHTT--------CCEEEEEECTTCBCTTSSBS---S--------SCCCCCCBCC
T ss_pred CccCCCCCCCCceEEEEeccCCchhhhccC--------ceEEEEEccCCCCCccCCcC---c--------ccceEEEEEE
Confidence 7644 58998876422 11112 11124443322111001110 0 0111111111
Q ss_pred eccc---CC-CCcceEEEcccccCC-CCCC-CcceeeeEEEEeeeee--eeeeccccCceeeeeeeeccCCccCCCCcCC
Q 008840 419 EYTS---NT-GKPTHLLINAKTLED-PVTE-TPKTLDQTELVNLEEF--KACMNKINDAIKCNLSKHACGKKQAVPVHEQ 490 (551)
Q Consensus 419 ~~~~---~~-g~~~~~~INg~~f~~-~~~~-~~~~~~~~~l~n~~~~--~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~ 490 (551)
++.. .. .....++|||+.|.. +... .+...+.|.|+|.... .|.+|.|+|.|. + +|
T Consensus 189 d~d~~~~~~~~~~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~--~----dG---------- 252 (306)
T 1sdd_A 189 VFDESKSWNQTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE--Q----NH---------- 252 (306)
T ss_dssp EEETTSSSSCCCCEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE--E----TT----------
T ss_pred ecccccccccCCCcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEee--e----CC----------
Confidence 1111 01 113458999999853 2111 1223678999998753 566777777542 1 33
Q ss_pred CcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 491 GWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 491 ~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.++||+.|.||++++|+|+|+ +|| |+||||+++|++.|||+.|+|.
T Consensus 253 ~~~dtv~l~pger~~v~~~~~--------------~pG~~~~hch~~~H~~~GM~~~~~V~ 299 (306)
T 1sdd_A 253 HKISAITLVSATSTTANMTVS--------------PEGRWTIASLIPRHFQAGMQAYIDIK 299 (306)
T ss_dssp EECSCCCEETTCCBC----------------------CCCCCBCCSTTTGGGTCBCCC---
T ss_pred EEcceEEECCCcEEEEEEEcC--------------CCeEEEEEeCChHHHhcCCeEEEEEe
Confidence 259999999999999999997 567 9999999999999999999985
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=8.6e-18 Score=171.84 Aligned_cols=217 Identities=13% Similarity=0.111 Sum_probs=138.5
Q ss_pred ccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCC--------
Q 008840 280 AWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES-------- 350 (551)
Q Consensus 280 ~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~-------- 350 (551)
+-|.|.++. ++++++|.|... +..+||. ||..+. -..||..... -.|.||+.+...+++..+
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~-HG~~~~-~~~dG~~~~~------~~i~PG~~~~Y~~~~~~P~~~~~~~~ 110 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMD-VPVSLHV-HGLDYE-ISSDGTKQSR------SDVEPGGTRTYTWRTHVPGRRADGTW 110 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEE-SSSBCC-GGGSCSTTTT------CCBCTTCEEEEEEBCCCCEECTTSCE
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEee-cCCcCC-ccCCCCcccc------CCcCCCCEEEEEEEeccCCccccccc
Confidence 468999987 899999999874 4567888 786554 3578876422 248899999887776532
Q ss_pred ---CCceEEEecCCCCCCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecccCCCCc
Q 008840 351 ---TSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYTSNTGKP 427 (551)
Q Consensus 351 ---~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~~~~g~~ 427 (551)
..++|+-.+........ ......+-.-.|.|..+. + + ..+++..+.+.
T Consensus 111 ~~~~~gt~~YH~h~~~~~~~--~~~~~~Gl~G~liV~~~~--~-------~---------~~d~e~~l~~~--------- 161 (313)
T 3tas_A 111 RAGSAGYWHYHDHVVGTEHG--TGGIRNGLYGPVIVRRKG--D-------V---------LPDRTHTIVFN--------- 161 (313)
T ss_dssp ECCSCEEEEEECSSSSSTTC--HHHHHHTCEEEEEEECTT--C-------B---------CCSEEEEEEEE---------
T ss_pred cCCCceEEEEeecCcccccc--hhhhhccccCceEeeccc--c-------c---------cccccceeecc---------
Confidence 12366655542110000 000001112234443221 0 0 11223333332
Q ss_pred ceEEEcccccCCCCCC--CcceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEE
Q 008840 428 THLLINAKTLEDPVTE--TPKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTR 505 (551)
Q Consensus 428 ~~~~INg~~f~~~~~~--~~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~ 505 (551)
.|+|||+.+...... .....++|.++|...+.|++|.|+|.| .+.. .++. ..+...+.|+|||.|.||++++
T Consensus 162 -d~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F--~v~~-~~~~--~~~~~~~~~~Dtv~l~Pger~~ 235 (313)
T 3tas_A 162 -DMTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRW--ADNR-TGML--TGPDDPSQVIDNKICGPADSFG 235 (313)
T ss_dssp -TTEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCE--ESST-TSSC--CSTTCCCCEESEEEECTTCEEE
T ss_pred -chhcccCCcccccccccccCCEEEEEEecccccceeeeecCCee--EEEE-ECCc--cCCCCCCeeeeEEEeCCCcceE
Confidence 389999988653211 112278899999998899999999855 3322 2332 2233456899999999999999
Q ss_pred EEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 506 ILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 506 i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
+++.+.. .+||| |||||||++|++.|||+.|+|.+
T Consensus 236 v~v~a~~-----------~~nPG~w~~HCHi~~H~~~GM~~~f~V~~ 271 (313)
T 3tas_A 236 FQVIAGE-----------GVGAGAWMYHCHVQSHSDMGMVGLFLVKK 271 (313)
T ss_dssp EEEETTT-----------TTCSEEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred EEEEecc-----------CCCCEeEEEEeCChHHHHCCCeEEEEEEC
Confidence 9887652 13889 99999999999999999999853
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=99.68 E-value=4.9e-16 Score=160.69 Aligned_cols=227 Identities=15% Similarity=0.119 Sum_probs=131.5
Q ss_pred CceEEECCcc-cCceeecC-eEEEEEEEecCC-CceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEc
Q 008840 271 GDVIVVNGKA-WPRMTVRR-RKYRFRIINASN-ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDF 347 (551)
Q Consensus 271 gd~~lVNG~~-~P~~~v~~-~~~RlRllNas~-~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~ 347 (551)
.+.+++||+. .|.|+++. +++|+|+.|... .+.+.+++ ++... +.||..+ . .|.||||+++.+++
T Consensus 59 ~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~-~~~~~---~~~~~~~----~----~i~PG~~~~y~~~~ 126 (340)
T 2bw4_A 59 IHAMTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDF-HAATG---ALGGGAL----T----QVNPGEETTLRFKA 126 (340)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEE-TTSCS---GGGGGGG----C----CBCTTEEEEEEEEC
T ss_pred EEEEEECCCCCCCcEEEcCCCEEEEEEEeCCCCCccCccee-CCcCC---CCCCccc----e----EeCCCCEEEEEEEC
Confidence 4689999984 78999988 899999999984 35666777 56431 2233322 1 39999999999999
Q ss_pred CCCCCceEEEecCCCC----CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc--
Q 008840 348 SESTSDVAILANDAPY----PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT-- 421 (551)
Q Consensus 348 ~~~~g~~~~L~~~~~~----~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~-- 421 (551)
++ + ++|+..+.... ....| -.-.+.|..... ....++. +. ...+...+.+.++.
T Consensus 127 ~~-~-Gt~wyH~h~~~~~~~~~~~G--------l~G~~iV~~~~~-~~~~~~~---p~------~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 127 TK-P-GVFVYHCAPEGMVPWHVTSG--------MNGAIMVLPRDG-LKDEKGQ---PL------TYDKIYYVGEQDFYVP 186 (340)
T ss_dssp CS-C-EEEEEECCCTTCHHHHHHTT--------CEEEEEEECTBC-EECTTSC---EE------CCSEEEEEEEEEECCC
T ss_pred CC-C-eEEEEEcCCCCchhhHHhCc--------CEEEEEEccCcC-cccccCC---Cc------CcceeEEEeeeeeeec
Confidence 86 3 48998876421 11111 112234432211 0000110 00 00011111111110
Q ss_pred -cC----------------------CCCcceEEEcccccCCC----CCCCcceeeeEEEEeeeeeeeeeccccCceeeee
Q 008840 422 -SN----------------------TGKPTHLLINAKTLEDP----VTETPKTLDQTELVNLEEFKACMNKINDAIKCNL 474 (551)
Q Consensus 422 -~~----------------------~g~~~~~~INg~~f~~~----~~~~~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v 474 (551)
+. ...+..|+|||+.|... ..-.+....+|...+.+.+.+..+.++|.+ .+
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~--~V 264 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGD--YV 264 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEE--EE
T ss_pred cccCCcccccccccccccchhhHhhcCCCCEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccceEEecCcce--EE
Confidence 00 11234689999998532 110111123333334334444444555533 33
Q ss_pred eeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccc-cccccCcccceEEc
Q 008840 475 SKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHIL-DHEDNIMMRPLKLI 550 (551)
Q Consensus 475 ~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL-~HED~GMM~~~~V~ 550 (551)
. .+|....+ ...|+|||.+.|||+++|+|+|+ +|| |+||||++ +|++.|||+.|+|.
T Consensus 265 i--~dG~~~~~---p~~~~dtv~l~pGer~~v~v~~~--------------~pG~y~~~~h~~~~h~~~Gm~~~~~V~ 323 (340)
T 2bw4_A 265 W--ATGKFRNP---PDLDQETWLIPGGTAGAAFYTFR--------------QPGVYAYVNHNLIEAFELGAAGHFKVT 323 (340)
T ss_dssp E--TTCCTTSC---CEEEESCCCBCTTEEEEEEEECC--------------SCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred e--CCCcccCC---ccccceEEEeCCCceEEEEEECC--------------CCeeeEEEcCchHHHHhCCCEEEEEEC
Confidence 2 25532211 12479999999999999999998 568 99999999 69999999999985
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=99.60 E-value=8.7e-15 Score=150.86 Aligned_cols=227 Identities=16% Similarity=0.126 Sum_probs=127.5
Q ss_pred CceEEECCcc-cCceeecC-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEc
Q 008840 271 GDVIVVNGKA-WPRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDF 347 (551)
Q Consensus 271 gd~~lVNG~~-~P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~ 347 (551)
...+++||+. -|.|.++. +++|+|+.|.+.+ +...+++ ++.. +.||+. +. . .|.||+++++.+++
T Consensus 52 ~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~-~~~~----~~~~~~---~~--~--~i~PG~~~~y~f~~ 119 (333)
T 1mzy_A 52 LQAMTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDF-HAAT----GALGGG---GL--T--LINPGEKVVLRFKA 119 (333)
T ss_dssp EEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEE-TTSC----SGGGGG---GG--C--CBCTTEEEEEEEEC
T ss_pred EEEEEECCccCCCcEEecCCCEEEEEEEECCCCccccccee-cCCC----CCCCCC---ce--e--EeCCCCEEEEEEEC
Confidence 3589999996 78999988 8999999999642 3344444 3321 123321 11 1 39999999999998
Q ss_pred CCCCCceEEEecCCCC-----CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc-
Q 008840 348 SESTSDVAILANDAPY-----PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT- 421 (551)
Q Consensus 348 ~~~~g~~~~L~~~~~~-----~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~- 421 (551)
++ + ++|+..+.... ....| -.-.+.|..... ++..+. .+ ...++...+.+.++-
T Consensus 120 ~~-~-Gt~~yH~h~~~~~~~~~~~~G--------l~G~~iV~~~~~-----~~~~~~-~p----~~~d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 120 TR-A-GAFVYHCAPGGPMIPWHVVSG--------MAGCIMVLPRDG-----LKDHEG-KP----VRYDTVYYIGESDHYI 179 (333)
T ss_dssp CS-C-EEEEEECCCSTTHHHHHHHTT--------CEEEEEEECTTC-----CBCTTS-CB----CCCSEEEEEEEEEECC
T ss_pred CC-C-EEEEEeecCCcccchhhhhCC--------CEEEEEEccCcC-----cccccc-CC----Cccchheeeeeeeecc
Confidence 76 3 48998876421 11112 122344432211 111000 00 000111111111110
Q ss_pred ------------------------cCCCCcceEEEcccccCCCCCC--CcceeeeEEEEeeee--eeeeeccccCceeee
Q 008840 422 ------------------------SNTGKPTHLLINAKTLEDPVTE--TPKTLDQTELVNLEE--FKACMNKINDAIKCN 473 (551)
Q Consensus 422 ------------------------~~~g~~~~~~INg~~f~~~~~~--~~~~~~~~~l~n~~~--~~~~~~~~~~~~~~~ 473 (551)
.....+..|+|||+.+...... ..+.=+.++|.|... ..+....++|.+ .
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~--~ 257 (333)
T 1mzy_A 180 PKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGD--L 257 (333)
T ss_dssp CBCTTSCBCCCSSHHHHHHHHHHHHTTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEE--E
T ss_pred CccccccccccccccccccchhHHhhccCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCccccEEECCCCe--E
Confidence 0011234689999986432100 011113456666532 111112233422 2
Q ss_pred eeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccccc-ccCcccceEEc
Q 008840 474 LSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHE-DNIMMRPLKLI 550 (551)
Q Consensus 474 v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HE-D~GMM~~~~V~ 550 (551)
+. .+|...+++ ..|+||+.|.|||+++|++.|+ +|| |+||||+++|+ |.|||+.|+|.
T Consensus 258 Vi--~dG~~~~~p---~~~~dtv~l~pGer~~v~v~a~--------------~pG~y~~~ch~~~h~~~~Gm~~~~~v~ 317 (333)
T 1mzy_A 258 VW--ETGKFHNAP---ERDLETWFIRGGTAGAALYKFL--------------QPGVYAYVNHNLIEAVHKGATAHVLVE 317 (333)
T ss_dssp EE--TTCCTTSCC---EEEESBCCBCTTEEEEEEEECC--------------SCEEEEEEESSHHHHHTTCCEEEEEEE
T ss_pred EE--eCCcccCCC---ccCcceEEECCCceEEEEEEcC--------------CCEEEEEecChhhhHhhCCCEEEEEEc
Confidence 32 256432221 2489999999999999999987 568 99999999998 99999999985
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=3.8e-14 Score=158.66 Aligned_cols=223 Identities=14% Similarity=0.191 Sum_probs=133.2
Q ss_pred CcccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCC--c-eEecEEEEccCceEEEEEEcCCCCC-
Q 008840 278 GKAWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGK--P-VVTNDTVLAPAEIADVVIDFSESTS- 352 (551)
Q Consensus 278 G~~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~--P-~~~~~l~l~pgeR~dVlv~~~~~~g- 352 (551)
+-.-|.|.++. +++++||.|... +...||. ||.... ...||.+... | ..+....|.||++++..+++++..|
T Consensus 65 ~~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~-HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp 141 (647)
T 1sdd_B 65 GILGPVIRAEVDDVIQVRFKNLAS-RPYSLHA-HGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGP 141 (647)
T ss_dssp TTSCCCEEEETTCEEEEEECCCSS-SCBCCEE-ETCC----------------------CCBCTTCCEECCEECCTTTSC
T ss_pred CCcCceEEEeCCCEEEEEEEECCC-CceEEec-CcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCC
Confidence 34678999987 899999999985 4567888 786654 5789986421 1 2234667999999999999987532
Q ss_pred ---c----eEEEecCCCC--CCCCCCCCCCCCCceEEEEEccCCCCCC-CCCCCCCCCCCCCCCccCceeeEEeeeecc-
Q 008840 353 ---D----VAILANDAPY--PYPAGNPVNDANGKVMKFIILKNRETDP-WRVPEKLIEYPSADLSAASTTRYIAMYEYT- 421 (551)
Q Consensus 353 ---~----~~~L~~~~~~--~~~~g~~~~~~~~~vm~f~v~~~~~~~~-~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~- 421 (551)
+ +|+-++.... +...| -.-.|.|........ ..+|. ..++..+.|.++.
T Consensus 142 ~~~G~~c~T~wYHsH~~~~~q~~~G--------L~G~lIV~~~~~~~~~~~~~~------------~~~e~~l~l~~~d~ 201 (647)
T 1sdd_B 142 ENPGSACRAWAYYSAVNPEKDIHSG--------LIGPLLICRKGTLDKETNMPV------------DMREFVLLFMVFDE 201 (647)
T ss_dssp CSSSCSEEEEEEECCSSHHHHHTTT--------CEEEEEEECTTSSCTTSCCCS------------SCCEEEEEEEEEEG
T ss_pred CCCCCCceEEEEccCCCCccccccc--------CccCEEEeeCCCcccccCCCC------------cceeEEEEEEeecC
Confidence 5 8888876421 11112 122344443221110 00110 0111111121000
Q ss_pred -------------------cCCCCcceEEEcccccCCCCCC-CcceeeeEEEEeeee--eeeeeccccCceeeeeeeecc
Q 008840 422 -------------------SNTGKPTHLLINAKTLEDPVTE-TPKTLDQTELVNLEE--FKACMNKINDAIKCNLSKHAC 479 (551)
Q Consensus 422 -------------------~~~g~~~~~~INg~~f~~~~~~-~~~~~~~~~l~n~~~--~~~~~~~~~~~~~~~v~~~~~ 479 (551)
.....+..++|||+.|+.+... .+...+.|.|+|... ..|++|.|+|.| .+.
T Consensus 202 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f--~vi---- 275 (647)
T 1sdd_B 202 KKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTL--LEN---- 275 (647)
T ss_dssp GGSSCCC---------------CCCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCE--EEC----
T ss_pred ccccccccCcccccccCCcchhhcCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEE--EEe----
Confidence 0001234689999998432221 122378899999874 368888888855 231
Q ss_pred CCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 480 GKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 480 G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+ . ++.++||+.|.||++++|+|+++ +|| |+||||+++|++.|||..|.|.
T Consensus 276 ~--~-----d~~~~d~v~l~pg~r~~v~~~~~--------------~pG~w~~hch~~~h~~~Gm~~~~~V~ 326 (647)
T 1sdd_B 276 G--T-----QQHQLGVWPLLPGSFKTLEMKAS--------------KPGWWLLDTEVGEIQRAGMQTPFLIV 326 (647)
T ss_dssp S--S-----SCEEESSEEECTTEEEEEEEECC--------------SSEEEEEECCCHHHHTTTCEEEEEEE
T ss_pred c--C-----CCcccceEEECCCeEEEEEEEec--------------cceEeecccCcccccccccccceeee
Confidence 1 0 23589999999999999999987 568 9999999999999999999984
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.7e-13 Score=139.33 Aligned_cols=218 Identities=12% Similarity=0.117 Sum_probs=141.8
Q ss_pred ceEEECCc-ccCceeecC-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGK-AWPRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~-~~P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..+++||+ ..|.|+++. +++|+|+.|.... ....+|+ ||.. +.||+.. ...|.|||++++.++++
T Consensus 59 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~-HG~~----~~dG~~~-------~~~i~PG~~~~y~f~~~ 126 (327)
T 1kbv_A 59 RYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDF-HAAT----GQGGGAA-------ATFTAPGRTSTFSFKAL 126 (327)
T ss_dssp EEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEE-TTCC----SGGGGTT-------TTCBCTTEEEEEEEECC
T ss_pred EEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEe-Cccc----cCCCCCc-------ceeecCCCEEEEEEECC
Confidence 57999998 578999988 8999999999853 4566777 7853 6788753 12489999999999987
Q ss_pred CCCCceEEEecCCCC---CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc----
Q 008840 349 ESTSDVAILANDAPY---PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT---- 421 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~---~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~---- 421 (551)
+. ++|+.++.... ....| -.-.+.|.... .+|. ..+...+.+.++-
T Consensus 127 ~~--Gt~wyH~h~~~~~~~~~~G--------l~G~~iV~~~~-----~~p~------------~d~e~~l~~~d~~~~~~ 179 (327)
T 1kbv_A 127 QP--GLYIYHCAVAPVGMHIANG--------MYGLILVEPKE-----GLPK------------VDKEFYIVQGDFYTKGK 179 (327)
T ss_dssp SC--EEEEEECCCSSHHHHHHTT--------CEEEEEEECTT-----CCCC------------CSEEEEEEEEEECBSSC
T ss_pred CC--eEEEEEeCCCChhhhhhcc--------eEEEEEEecCC-----CCCC------------CceEEEEEeeeeeccCc
Confidence 63 48988865310 00111 12234443321 1221 0011111111100
Q ss_pred ------------c-CCCCcceEEEcccccCCC----CCCCcceeeeEEEEeeee-eeeeeccccCceeeeeeeeccCCcc
Q 008840 422 ------------S-NTGKPTHLLINAKTLEDP----VTETPKTLDQTELVNLEE-FKACMNKINDAIKCNLSKHACGKKQ 483 (551)
Q Consensus 422 ------------~-~~g~~~~~~INg~~f~~~----~~~~~~~~~~~~l~n~~~-~~~~~~~~~~~~~~~v~~~~~G~~~ 483 (551)
. ....+..++|||+.+... ..-.+.....|+++|... ..+.+|.++|.| .+.. .+|...
T Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f--~vi~-~DG~~~ 256 (327)
T 1kbv_A 180 KGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIF--DKVY-VEGGKL 256 (327)
T ss_dssp TTCCEEECBCHHHHHHTCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCB--SEEE-GGGSSC
T ss_pred cccccccccChhHhccCCCceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEE--EEEE-cCCCcC
Confidence 0 001234689999988641 111223377899999874 456777888754 3433 356322
Q ss_pred CCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccccc-ccCcccceEEc
Q 008840 484 AVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHE-DNIMMRPLKLI 550 (551)
Q Consensus 484 ~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HE-D~GMM~~~~V~ 550 (551)
+ +.++||+.|.|||+++|+++|+ +|| |++|||+++|. +.||++.++|-
T Consensus 257 ~-----p~~~d~l~l~pGer~dv~v~~~--------------~pG~y~l~~h~~~~~~~~g~~a~l~~~ 306 (327)
T 1kbv_A 257 I-----NENVQSTIVPAGGSAIVEFKVD--------------IPGNYTLVDHSIFRAFNKGALGQLKVE 306 (327)
T ss_dssp E-----ECSBSEEEECTTEEEEEEEEEC--------------SCEEEEEEESSTHHHHHSSCEEEEEEE
T ss_pred C-----CCceeEEEECCCCEEEEEEEeC--------------CCeEEEEEeccccccccCCcEEEEEEC
Confidence 2 4589999999999999999998 567 99999999995 88999988874
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.7e-14 Score=123.00 Aligned_cols=88 Identities=14% Similarity=0.177 Sum_probs=69.6
Q ss_pred CCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC----CCCCCCcceeccccC
Q 008840 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE----SDGYAKSWFTAGFEE 171 (551)
Q Consensus 96 g~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~----~DG~p~~~~t~~~i~ 171 (551)
-.|++|+|++++||+|+ |+|.... ++++|+||...+.. +||.+ ..+..+.
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~---------------------~H~v~~~~~~~~~~~g~~~~~~~---~~~~~i~ 67 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLP---------------------PHNILFDDKQVPGASKELADKLS---HSQLMFS 67 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSC---------------------CEEEEECTTSSGGGCHHHHHHHC---EEEEECS
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCC---------------------CCeEEEeCCCCCccccccccccc---ccccccC
Confidence 46789999999999874 6798765 79999999876541 22222 3445689
Q ss_pred CCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 172 KGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 172 pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
||+++ +|.|+++.++|+||||||.| ..+||.|.|+|+|
T Consensus 68 pG~~~---~~~f~~~~~~G~y~y~C~~H------~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 68 PGESY---EITFSSDFPAGTYTYYCAPH------RGAGMVGKITVEG 105 (105)
T ss_dssp TTCEE---EEEECTTSCSEEEEEECTTT------GGGTCEEEEEECC
T ss_pred CCCeE---EEEEecCCCCeeEEEEeCCc------hhcCCEEEEEEcC
Confidence 99999 99999855899999999954 3689999999974
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.5e-14 Score=161.94 Aligned_cols=228 Identities=11% Similarity=0.093 Sum_probs=134.1
Q ss_pred CcccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCC------
Q 008840 278 GKAWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSES------ 350 (551)
Q Consensus 278 G~~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~------ 350 (551)
|-.-|.|.++. ++++++|.|... +...||. ||..+..-..||..- + ...|.||++++..+.+.+.
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~-HG~~~~~~~~dG~~~--~----~~~I~PG~~~tY~f~~~~~~gp~~~ 266 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQAS-RPYSFYS-SLISYEEDQRQGAEP--R----KNFVKPNETKTYFWKVQHHMAPTKD 266 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSS-SCCCCCB-TTCCCCCCSSSCTTT--T----SSCCCSSCEEEEECCCCSSSSCCSS
T ss_pred CCCCCeEEEEcCCEEEEEEEECCC-CCcceee-cccccccccCCCCcC--c----cCccCCCCeEEEEEEecCccCCccC
Confidence 34568999987 899999999974 5677888 787665444457642 1 2468999999998887741
Q ss_pred --CCceEEEecCCCCC--CCCCCCCCCCCCceEEEEEccCCCCCCCC-CCC-------CCCCCCC---CCCccCceeeEE
Q 008840 351 --TSDVAILANDAPYP--YPAGNPVNDANGKVMKFIILKNRETDPWR-VPE-------KLIEYPS---ADLSAASTTRYI 415 (551)
Q Consensus 351 --~g~~~~L~~~~~~~--~~~g~~~~~~~~~vm~f~v~~~~~~~~~~-lP~-------~L~~~~~---~~~~~~~~~r~~ 415 (551)
..++|+-.+..... ...| -+-.|.|.......... .+. .+..+.. .-... ..+.+
T Consensus 267 d~~~Gt~wYHsh~~~~~q~~~G--------L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~--~~~~~ 336 (770)
T 2r7e_B 267 EFDCKAWAYSSDVDLEKDVHSG--------LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTE--NMERN 336 (770)
T ss_dssp CCSEEEEEECCCSSSSHHHHTS--------CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTG--GGSSC
T ss_pred CCCCeeEEeeccCCcHHHHhCC--------ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhcc--chhhc
Confidence 22477776654210 0111 12223343321110000 000 0000000 00000 00000
Q ss_pred e-----eeec-ccCCCCcceEEEcccccCCC--CCCCcceeeeEEEEeeee--eeeeeccccCceeeeeeeeccCCccCC
Q 008840 416 A-----MYEY-TSNTGKPTHLLINAKTLEDP--VTETPKTLDQTELVNLEE--FKACMNKINDAIKCNLSKHACGKKQAV 485 (551)
Q Consensus 416 ~-----l~~~-~~~~g~~~~~~INg~~f~~~--~~~~~~~~~~~~l~n~~~--~~~~~~~~~~~~~~~v~~~~~G~~~~~ 485 (551)
. +... .........++|||+.|... ....+...+.|.|+|... ..|++|.|+|.| .+.. .+|
T Consensus 337 ~~~p~~~~~~d~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f--~Vv~-~dg----- 408 (770)
T 2r7e_B 337 CRAPCNIQMEDPTFKENYRFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVF--TVRK-KEE----- 408 (770)
T ss_dssp SCCSSCCCSSSSSSTTTSCEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCE--ECCS-SSC-----
T ss_pred ccCccccccCCccccccCCccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEE--EEEe-cCC-----
Confidence 0 0000 00000123488999998532 111222378899999864 368899999855 3322 111
Q ss_pred CCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 486 PVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 486 ~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.|+|||.|.||++++|+|+++ +|| ||+|||+++|++.|||..|+|.
T Consensus 409 -----~~~Dtv~l~Pg~~~~v~~~ad--------------~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 409 -----YKMALYNLYPGVFETVEMLPS--------------KAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp -----CEESEEECCTTCCCEEEECCS--------------SCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred -----ceeeEEEECCCeEEEEEEEeC--------------CCCceEEEeccccccccccccccccc
Confidence 399999999999999999887 678 9999999999999999999884
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.5e-13 Score=141.14 Aligned_cols=238 Identities=10% Similarity=0.043 Sum_probs=152.3
Q ss_pred cCceeEEEEEeeec-CCCceEecCCCCCCCCCCCCCCccCCceEEECCcc-cCceeecC-eEEEEEEEecCC-CceEEEE
Q 008840 232 VFDRPLFVFDRNFL-TNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA-WPRMTVRR-RKYRFRIINASN-ARFFRFF 307 (551)
Q Consensus 232 ~~e~~lvl~d~~~~-~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~-~P~~~v~~-~~~RlRllNas~-~~~~~l~ 307 (551)
..++.|.+++..+. .+|.. ...+++||+. .|.|.++. ++++||+.|... .....+|
T Consensus 28 ~~~~~l~~~~~~~~~~~g~~--------------------~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH 87 (442)
T 2zoo_A 28 KVVINLETREQVGRIADGVE--------------------YVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNID 87 (442)
T ss_dssp EEEEEEEEEEEEEEEETTEE--------------------EEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCE
T ss_pred EEEEEEEEEEEEEEcCCCcE--------------------EEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEE
Confidence 45667777776554 23432 3589999996 79999987 899999999974 3466778
Q ss_pred EcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCC---CCCCCCCCCCCCCCceEEEEEc
Q 008840 308 FTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAP---YPYPAGNPVNDANGKVMKFIIL 384 (551)
Q Consensus 308 l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~---~~~~~g~~~~~~~~~vm~f~v~ 384 (551)
+ ||.. ..||... ...|.||+++++.+++++. ++|+...... .....| -.-.|.|.
T Consensus 88 ~-HG~~----~~dG~~~-------~~~i~pg~~~~y~f~~~~~--Gt~~yH~H~~~~~~~~~~G--------l~G~~iv~ 145 (442)
T 2zoo_A 88 L-HAVT----GPGGGAE-------SSFTAPGHTSTFNFKALNP--GLYIYHCATAPVGMHIANG--------MYGLILVE 145 (442)
T ss_dssp E-TTCC----SGGGGGG-------GCCBCTTCEEEEEEECCSC--EEEEEECCCSSHHHHHHTT--------CEEEEEEE
T ss_pred e-cCCc----CCCCCCc-------cEEECCCCEEEEEEEcCCC--eEEEEecCCCChHHHHhCc--------cEEEEEEe
Confidence 8 7854 4688643 2358999999999998763 3899887421 001112 22334454
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeec----------------cc-CCCCcceEEEcccccCCCC---CC-
Q 008840 385 KNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEY----------------TS-NTGKPTHLLINAKTLEDPV---TE- 443 (551)
Q Consensus 385 ~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~----------------~~-~~g~~~~~~INg~~f~~~~---~~- 443 (551)
... .+|. . .+...+.+.++ .. ....+..++|||+.+.... ..
T Consensus 146 ~~~-----~~~~----~--------d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v 208 (442)
T 2zoo_A 146 PKE-----GLAP----V--------DREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTTDENSLTA 208 (442)
T ss_dssp CTT-----CCCC----C--------SEEEEEEEEEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTSTTTTSGGGCEEE
T ss_pred CCC-----CCCC----C--------CceEEEEeeeeeccCcccccccccCChhHhccCCCCEEEECCCcCCCCCCCceEe
Confidence 321 1110 0 00111111110 00 0122346899999885321 11
Q ss_pred CcceeeeEEEEeeee-eeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCC
Q 008840 444 TPKTLDQTELVNLEE-FKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFD 522 (551)
Q Consensus 444 ~~~~~~~~~l~n~~~-~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~ 522 (551)
.+...+.|+|+|... ..+.++.++|.+ .+.. .+|...+ +.++|++.+.||++++|+++|+
T Consensus 209 ~~G~~vrlrliN~~~~~~~~~~i~g~~~--~vi~-~DG~~~~-----p~~~~~~~l~pg~r~~v~v~~~----------- 269 (442)
T 2zoo_A 209 KVGETVRLYIGNGGPNLVSSFHVIGEIF--DTVY-VEGGSLK-----NHNVQTTLIPAGGAAIVEFKVE----------- 269 (442)
T ss_dssp ETTCEEEEEEEEEESSCCEEEEEETCCB--SEEE-GGGSSCE-----ECSBSEEEECTTEEEEEEEECC-----------
T ss_pred CCCCEEEEEEEeCCCCCceeeEEcCCEE--EEEe-cCCccCC-----CccceEEEECCCeeEEEEEEcC-----------
Confidence 122377899999763 456677777744 3333 4663222 4689999999999999999997
Q ss_pred CCCCCc-eEEeeccccc-cccCcccceEEc
Q 008840 523 ATAEPG-YVYHCHILDH-EDNIMMRPLKLI 550 (551)
Q Consensus 523 ~~~~pg-~~~HCHiL~H-ED~GMM~~~~V~ 550 (551)
++| |++|||.+.| ++.|||..|+|.
T Consensus 270 ---~~G~y~~~~~~~~~~~~~g~~a~l~v~ 296 (442)
T 2zoo_A 270 ---VPGTFILVDHSIFRAFNKGALAMLKVE 296 (442)
T ss_dssp ---SCEEEEEEESSTHHHHTTSCEEEEEEE
T ss_pred ---CCCeEEEEecccccccccCceEEEEec
Confidence 457 9999999999 699999999874
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=99.36 E-value=2e-11 Score=125.84 Aligned_cols=226 Identities=16% Similarity=0.127 Sum_probs=129.9
Q ss_pred ceEEECCc-ccCceeecC-eEEEEEEEecCCC-ceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcC
Q 008840 272 DVIVVNGK-AWPRMTVRR-RKYRFRIINASNA-RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 272 d~~lVNG~-~~P~~~v~~-~~~RlRllNas~~-~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
..+++||+ .-|.|.++. +++|+|+.|...+ ....+++ +|+.. .||+. +. . .|.||++++..++++
T Consensus 54 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~-h~~~~----~~~~~---~~--~--~i~pG~~~~y~f~~~ 121 (336)
T 1oe1_A 54 QAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDF-HGATG----ALGGA---KL--T--NVNPGEQATLRFKAD 121 (336)
T ss_dssp EEEEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEE-TTSCS----GGGGG---GG--C--CBCTTEEEEEEEECC
T ss_pred EEEEECCccCCCeEEEcCCCEEEEEEEcCCCCCccccceE-CCCCC----CCCCc---ce--E--EeCCCCEEEEEEECC
Confidence 58999998 578999988 8999999998743 5566777 67542 34432 11 1 399999999999987
Q ss_pred CCCCceEEEecCCCC----CCCCCCCCCCCCCceEEEEEccCCCCCCCCCCCCCCCCCCCCCccCceeeEEeeeecc---
Q 008840 349 ESTSDVAILANDAPY----PYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKLIEYPSADLSAASTTRYIAMYEYT--- 421 (551)
Q Consensus 349 ~~~g~~~~L~~~~~~----~~~~g~~~~~~~~~vm~f~v~~~~~~~~~~lP~~L~~~~~~~~~~~~~~r~~~l~~~~--- 421 (551)
+ + ++|+....... ....| -.-.+.|..... ....++. + ...++..-+.+.++-
T Consensus 122 ~-~-Gt~~yH~h~~~~~~~~~~~G--------l~G~liV~~~~~-~~~~~~~---~------~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 122 R-S-GTFVYHCAPEGMVPWHVVSG--------MSGTLMVLPRDG-LKDPQGK---P------LHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp S-C-EEEEEECCCTTCHHHHHHTT--------CEEEEEEECTTC-CBCTTSC---B------CCCSEEEEEEEEEECCCB
T ss_pred C-C-eEEEEecCCCCchhHHHhCC--------CeEEEEEecCcC-CcccccC---c------ccCCceeEeeeeeeeecc
Confidence 6 3 48988876421 00111 122344443211 0001110 0 001111111111110
Q ss_pred cC----------------------CCCcceEEEcccccCCCCCC--CcceeeeEEEEeeeee--eeeeccccCceeeeee
Q 008840 422 SN----------------------TGKPTHLLINAKTLEDPVTE--TPKTLDQTELVNLEEF--KACMNKINDAIKCNLS 475 (551)
Q Consensus 422 ~~----------------------~g~~~~~~INg~~f~~~~~~--~~~~~~~~~l~n~~~~--~~~~~~~~~~~~~~v~ 475 (551)
+. ...+..++|||+.+...... ..+.=+.++++|.... .+....++|.+ .+.
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~--~Vi 259 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALTGANALTAKVGETVLLIHSQANRDTRPHLIGGHGD--WVW 259 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEETTCCEE--EEE
T ss_pred ccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCCCCcceEcCCCCEEEEEecCCCCccceEEECCcCc--eEe
Confidence 00 01234689999987432100 0010123455555432 12222345533 332
Q ss_pred eeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccccc-ccCcccceEEc
Q 008840 476 KHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHE-DNIMMRPLKLI 550 (551)
Q Consensus 476 ~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HE-D~GMM~~~~V~ 550 (551)
.+|....++ ..++||+.+.||+++.|++.|+ +|| |+||||.+.|. +.|||+.|+|.
T Consensus 260 --~DG~~~~p~---~~~~dtv~i~pGer~dvlv~~~--------------~pG~y~~~~h~~~~~~~~G~~~~~~V~ 317 (336)
T 1oe1_A 260 --ETGKFANPP---QRDLETWFIRGGSAGAALYTFK--------------QPGVYAYLNHNLIEAFELGAAGHIKVE 317 (336)
T ss_dssp --TTCCTTSCC---EEEESBCCBCTTEEEEEEEECC--------------SCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred --CCCcCcCCc---cccceEEEECCCCcEEEEEEcC--------------CCceEEEEechhhccccCCCeEEEEEC
Confidence 266432221 2478999999999999999998 568 99999999986 99999999985
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1.5e-10 Score=123.64 Aligned_cols=215 Identities=12% Similarity=0.088 Sum_probs=136.3
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCC-cc--eeccc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAK-SW--FTAGF 169 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~-~~--~t~~~ 169 (551)
+||+. .|+|+|++| ++|+|+.|.-... ...+|++|....- ..||.+- .+ +..-.
T Consensus 182 iNG~~-~p~l~v~~g-~~RlRliN~~~~~--------------------~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~ 239 (439)
T 2xu9_A 182 VNGAL-RPTLVAQKA-TLRLRLLNASNAR--------------------YYRLALQDHPLYLIAADGGFLEEPLEVSELL 239 (439)
T ss_dssp ETTEE-SCEEECSSS-EEEEEEEECCSSC--------------------CEEEEETTBCEEEEEETTEEEEEEEEESCEE
T ss_pred ECCcc-CCcEEecCC-eEEEEEEecCCCc--------------------eEEEEECCceEEEEecCCCCCCCceEeceEE
Confidence 35764 799999999 9999999986652 6889999875433 2788761 21 12235
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccc--------------eEEEEEeCCCCCCCCCCCCCC--cC
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGL--------------IGAYILRHPDVEAPLRLPSGD--VF 233 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL--------------~G~~iV~dp~~~~~~~lP~~~--~~ 233 (551)
|.||+++ +..+.+++ +|.||++++.......+. .|| ....+++-.....+..+|... ..
T Consensus 240 l~pgeR~---dv~v~~~~-~G~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l~~~~ 314 (439)
T 2xu9_A 240 LAPGERA---EVLVRLRK-EGRFLLQALPYDRGAMGM-MDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPFP 314 (439)
T ss_dssp ECTTCEE---EEEEECCS-SEEEEEEEECCCCCCEEE-ECSSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCCCCCC
T ss_pred ECCceeE---EEEEEcCC-CceEEEEecccccCCccc-cccccccccccCCCCCcceeEEEEecCCCccccCcccCCCcc
Confidence 7899998 88888874 999999998643211110 122 112222211101122233210 00
Q ss_pred ce--eEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC----ceeecC-eEEEEEEEecCCCceEEE
Q 008840 234 DR--PLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP----RMTVRR-RKYRFRIINASNARFFRF 306 (551)
Q Consensus 234 e~--~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P----~~~v~~-~~~RlRllNas~~~~~~l 306 (551)
+. +-.-..+.+. . +..+..++|||+.+. .+.++. ++++|+|.|.+.. ...+
T Consensus 315 ~l~~~~~~r~~~l~--------~-------------~~~g~~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~~-~HP~ 372 (439)
T 2xu9_A 315 TLPAPVVTRRLVLT--------E-------------DMMAARFFINGQVFDHRRVDLKGQAQTVEVWEVENQGDM-DHPF 372 (439)
T ss_dssp CCCCCSEEEEEEEE--------E-------------EGGGTEEEETTBCCCTTCCCEEECTTCEEEEEEEECSSS-CEEE
T ss_pred cCCCCCcceEEEEE--------e-------------eccCceEeECCEECCCCCCceecCCCCEEEEEEEcCCCC-CCCc
Confidence 00 0000000000 0 001347889999864 356666 8999999998743 3455
Q ss_pred EEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 307 FFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 307 ~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
|| ||+.|+|++.+|+..+.|...|++.+.||+++.|.++++. +| .+.+...
T Consensus 373 HL-HG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn-pG-~w~~HCH 423 (439)
T 2xu9_A 373 HL-HVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE-KG-RTVFHCH 423 (439)
T ss_dssp EE-SSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCS-CE-EEEEEES
T ss_pred ee-CCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC-CC-CEEEECC
Confidence 66 8999999999999887788999999999999999999654 34 6766654
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1e-09 Score=117.47 Aligned_cols=215 Identities=9% Similarity=0.011 Sum_probs=124.9
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEee-CCCCCCC-CCCCCCC---cceecc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHL-HGGIDEP-ESDGYAK---SWFTAG 168 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~-HG~~~~~-~~DG~p~---~~~t~~ 168 (551)
+||+ +.|+|+|++| ++|+|+.|..... ..++|+ ||....- ..||.+- ..+...
T Consensus 187 iNG~-~~p~~~v~~g-~~RlRliNa~~~~--------------------~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l 244 (451)
T 2uxt_A 187 VNGV-QSPYVEVSRG-WVRLRLLNASNSR--------------------RYQLQMNDGRPLHVISGDQGFLPAPVSVKQL 244 (451)
T ss_dssp ETTE-ESCEEEECSS-EEEEEEEECCSSC--------------------CEEEEETTSCCEEEEECSSSEEEEEEEESSE
T ss_pred ECCc-ccceEEecCC-EEEEEEEccCCce--------------------eEEEEECCCCeEEEEEeCCCccCCceEeceE
Confidence 3575 5799999999 9999999987652 688999 8865432 3789641 112334
Q ss_pred ccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCC
Q 008840 169 FEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNG 248 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g 248 (551)
.|.||+++ ++-+.++ ++|+||++++.... . ...+.|.. ++. . . .....++ .+.-....
T Consensus 245 ~l~pgeR~---dvlv~~~-~~~~~~l~~~~~~~-~---~~~~~~~~---~~~-~------~--~~~~~il--~~~~~~~~ 302 (451)
T 2uxt_A 245 SLAPGERR---EILVDMS-NGDEVSITCGEAAS-I---VDRIRGFF---EPS-S------I--LVSTLVL--TLRPTGLL 302 (451)
T ss_dssp EECTTCEE---EEEEECT-TCCCEEEEC-----------------------C-C------C--CSCCEEE--EEEECSCC
T ss_pred EECceeEE---EEEEEeC-CCCEEEEEecCccc-c---cccccccc---ccC-C------C--CCCcceE--EEEecCCC
Confidence 68899998 8888886 57999999986421 1 01111100 000 0 0 0000010 00000000
Q ss_pred ce---EecCCCCCC--CCCCCCCC----ccCCceEEECCcccC----ceeecC-eEEEEEEEecCCCceEEEEEcCCceE
Q 008840 249 SI---YMNSTGNNP--SIHPQWQP----EYFGDVIVVNGKAWP----RMTVRR-RKYRFRIINASNARFFRFFFTNGLRF 314 (551)
Q Consensus 249 ~~---~~~~~g~~~--~~~~~~~~----~~~gd~~lVNG~~~P----~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~ 314 (551)
.. ..+.. ..+ ........ .+.+ .++|||+.++ .+.++. ++++|+|.|. -...+|| ||+.|
T Consensus 303 ~~~~~~~p~~-L~~~~~~~~~~~~~~~~~l~~-~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~---~~HP~HL-HGh~F 376 (451)
T 2uxt_A 303 PLVTDSLPMR-LLPTEIMAGSPIRSRDISLGD-DPGINGQLWDVNRIDVTAQQGTWERWTVRAD---EPQAFHI-EGVMF 376 (451)
T ss_dssp C----CCCSC-SSSSCCCCCCCSEEEEEEECS-SSSBTTBCCCTTCCCEEEETTCEEEEEEEEE---EEEEEEE-TTCEE
T ss_pred cCccccCccc-cCCCCCCCCCCcceEEEEEee-EEEECCEeCCCCCCcEEcCCCCEEEEEEECC---CCcCeEE-CCceE
Confidence 00 00000 000 00000000 0001 4679999864 466776 8999999998 2456677 89999
Q ss_pred EEEEcCCCCCC--CceEecEEEEccCceEEEEEEcCCCCC--ceEEEecC
Q 008840 315 IHVGSDSAYLG--KPVVTNDTVLAPAEIADVVIDFSESTS--DVAILAND 360 (551)
Q Consensus 315 ~via~DG~~l~--~P~~~~~l~l~pgeR~dVlv~~~~~~g--~~~~L~~~ 360 (551)
+|++.||..++ .|...|++.+ |+++.|.++++++.. +.+.+...
T Consensus 377 ~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCH 424 (451)
T 2uxt_A 377 QIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQ 424 (451)
T ss_dssp EEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEES
T ss_pred EEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCC
Confidence 99999998764 4678899999 999999999987531 23666653
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=2.1e-09 Score=116.58 Aligned_cols=228 Identities=13% Similarity=0.098 Sum_probs=133.6
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCCc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPTW 176 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~~ 176 (551)
.|+|+|++|+++|+|+.|..... ...+|++|....- ..||.+-.++. .-.|.||+++
T Consensus 184 ~~~~~v~~g~~~RlRliN~~~~~--------------------~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~ 243 (503)
T 1hfu_A 184 LSIVNVEQGKKYRMRLISLSCDP--------------------NWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRY 243 (503)
T ss_dssp CCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEE
T ss_pred ceEEEEcCCCEEEEEEEecCCcc--------------------cEEEEEcCceEEEEeccCccccccccCeEEEcccceE
Confidence 39999999999999999986652 5788988875432 37887532222 1247899998
Q ss_pred ceeeEEEEcCccCceeEEeccCC-Cchh--hhhhccceEEEEEeCCCCC-CCC--CCCCCCcCceeEEEEEeeecCCCce
Q 008840 177 TNETYHYHNMQQPGNTWYHDHTM-GLTR--VNLLAGLIGAYILRHPDVE-APL--RLPSGDVFDRPLFVFDRNFLTNGSI 250 (551)
Q Consensus 177 ~~~~y~f~~~~~~Gt~wYH~H~~-g~t~--~qv~~GL~G~~iV~dp~~~-~~~--~lP~~~~~e~~lvl~d~~~~~~g~~ 250 (551)
+..+.+++.+|.||.+++.. +... .....|+..+++..+.... .+. ..|.. .. +.+..+..-...
T Consensus 244 ---dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~----~~--l~~~~l~p~~~~ 314 (503)
T 1hfu_A 244 ---SFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP----AQ--LNEADLHALIDP 314 (503)
T ss_dssp ---EEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC----CB--CCGGGCBBSSSC
T ss_pred ---EEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc----CC--CccccccccCcc
Confidence 88888877789999999864 2111 0122344444444322211 010 01110 00 000000000000
Q ss_pred EecCCCCCCCCCC---CCCCccCCceEEECCcccC-------------------------ceeecC-eEEEEEEEecCCC
Q 008840 251 YMNSTGNNPSIHP---QWQPEYFGDVIVVNGKAWP-------------------------RMTVRR-RKYRFRIINASNA 301 (551)
Q Consensus 251 ~~~~~g~~~~~~~---~~~~~~~gd~~lVNG~~~P-------------------------~~~v~~-~~~RlRllNas~~ 301 (551)
..+. ...+.... ....+..+..++|||+.+. .+.++. ++++++|+|....
T Consensus 315 ~~p~-~~~~~~~~~~~~l~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~ 393 (503)
T 1hfu_A 315 AAPG-IPTPGAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLG 393 (503)
T ss_dssp SCSS-CSSTTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTT
T ss_pred CCCC-cccCCcceEEEEEEeeccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCC
Confidence 0000 00000000 0000112337889998762 134565 7999999954323
Q ss_pred ceEEEEEcCCceEEEEEcCCCC---CCCceEecEEEE-ccCceEEEEEEcCCCCCceEEEecC
Q 008840 302 RFFRFFFTNGLRFIHVGSDSAY---LGKPVVTNDTVL-APAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 302 ~~~~l~l~~g~~~~via~DG~~---l~~P~~~~~l~l-~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
....+|| ||+.|+|++.+|+. +..|...|++.+ .||+++.|.++++++ | .+.+...
T Consensus 394 ~~HP~HL-HGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adnP-G-~W~~HCH 453 (503)
T 1hfu_A 394 GPHPFHL-HGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNP-G-PWFFHCH 453 (503)
T ss_dssp CCCEEEE-TTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSC-E-EEEEEES
T ss_pred CCCCEEE-ecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCCC-e-eeeEecC
Confidence 3445566 89999999999975 346889999999 799999999988764 3 6777664
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.08 E-value=5.9e-09 Score=113.56 Aligned_cols=225 Identities=12% Similarity=0.065 Sum_probs=132.2
Q ss_pred cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCCcc
Q 008840 101 PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPTWT 177 (551)
Q Consensus 101 Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~~~ 177 (551)
|+|+|++|+++|+|+.|.-... ...+|++|....- ..||.+-.++. .-.|.||+++
T Consensus 212 ~~~~v~~G~~~RlRliNa~~~~--------------------~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~- 270 (521)
T 1v10_A 212 AVVSVQSGKRYRFRIVSTSCFP--------------------NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRY- 270 (521)
T ss_dssp CEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEE-
T ss_pred eEEEECCCCEEEEEEEecCCcc--------------------cEEEEECCCeEEEEecCCccccceeeeeEEEcccceE-
Confidence 8999999999999999986652 5789998875432 27887532221 1247899998
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCCCceEecCCCC
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGN 257 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~ 257 (551)
+..+.+++.+|.||.+++.... ......|+..+++..+..... .|.....+ .-.+.+..+..-.....+. ..
T Consensus 271 --dvlv~~~~~~g~y~i~~~~~~~-~~~~~~~~~~ail~y~~~~~~---~p~~~~~~-~~~~~~~~l~p~~~~~~p~-~~ 342 (521)
T 1v10_A 271 --SVVVEANQAVGNYWIRANPSNG-RNGFTGGINSAIFRYQGAAVA---EPTTSQNS-GTALNEANLIPLINPGAPG-NP 342 (521)
T ss_dssp --EEEEECCSCSSEEEEEEEESSS-SCSCGGGTTEEEEEETTCCSC---CCCCCCCC-SCBCCGGGCCBSSCCCCSS-CS
T ss_pred --EEEEEcCCCCCceeeeeccccc-cccCCCCceeEEEEECCCCCC---CCCCCCCc-ccccchhhcccCCcccCCC-cc
Confidence 8888887778999999986421 011223454455544322110 01100000 0000000000000000000 00
Q ss_pred CCCCCC---CCCCccCCc--eEEECCcccC-------------------------ceeecC-eEEEEEEEecCCCceEEE
Q 008840 258 NPSIHP---QWQPEYFGD--VIVVNGKAWP-------------------------RMTVRR-RKYRFRIINASNARFFRF 306 (551)
Q Consensus 258 ~~~~~~---~~~~~~~gd--~~lVNG~~~P-------------------------~~~v~~-~~~RlRllNas~~~~~~l 306 (551)
.+.... ....++.+. .++|||+.+. .+.++. ++++++|+| +..++|
T Consensus 343 ~~~~~~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N-~~~HP~-- 419 (521)
T 1v10_A 343 VPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG-GGNHPF-- 419 (521)
T ss_dssp STTCSSEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC-CBSCEE--
T ss_pred cCCcceEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC-CCCCCE--
Confidence 000000 000001122 5788998762 245665 899999999 555555
Q ss_pred EEcCCceEEEEEcCCCC---CCCceEecEEEE-ccCceEEEEEEcCCCCCceEEEecC
Q 008840 307 FFTNGLRFIHVGSDSAY---LGKPVVTNDTVL-APAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 307 ~l~~g~~~~via~DG~~---l~~P~~~~~l~l-~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
|| ||+.|+|++.+|+. +..|...|++.+ .||+++.|.++++++ | .+.+...
T Consensus 420 HL-HGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNP-G-~W~~HCH 474 (521)
T 1v10_A 420 HL-HGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNP-G-PWFLHCH 474 (521)
T ss_dssp EE-SSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSC-E-EEEEEES
T ss_pred EE-ccceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCCC-e-eEEEeeC
Confidence 45 89999999999975 346889999999 799999999987764 3 6777654
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=99.06 E-value=2.7e-10 Score=103.94 Aligned_cols=87 Identities=20% Similarity=0.266 Sum_probs=59.1
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC--------CCCCCCcceeccc
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE--------SDGYAKSWFTAGF 169 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~--------~DG~p~~~~t~~~ 169 (551)
.++|+|+|++||+|+|+++|.... ..|.+.+..... ++..++..+.+ .
T Consensus 58 ~~~p~i~V~~GD~V~~~~tN~~~~-----------------------~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~ 113 (154)
T 2cal_A 58 KKNPTLEIPAGATVDVTFINTNKG-----------------------FGHSFDITKKGPPYAVMPVIDPIVAGTGFSP-V 113 (154)
T ss_dssp EESCEEEECTTCEEEEEEEECCTT-----------------------CCCCCEEESCCSCCCSSCCCCSEEEEBCCCC-C
T ss_pred CCCCEEEEeCCCEEEEEEEcCCCC-----------------------eeeEEEEeecCcchhcccccccccccccccc-c
Confidence 478999999999999999996321 123333322111 11111100111 5
Q ss_pred cCCCC--CcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 170 EEKGP--TWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 170 i~pG~--~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
|.||+ +. +|.|++ ++|+||||||..+ |..+||+|.|+|+
T Consensus 114 i~PG~sgt~---t~tft~--~pGtY~y~C~~~g----H~~~GM~G~IiV~ 154 (154)
T 2cal_A 114 PKDGKFGYT---DFTWHP--TAGTYYYVCQIPG----MAATGMFGKIVVK 154 (154)
T ss_dssp CBTTBEEEE---EEEECC--CSEEEEEECCSTT----TGGGTCEEEEEEC
T ss_pred cCCCCceEE---EEEEEE--CCceEEEECCCCC----HHHCCCEEEEEEC
Confidence 78999 66 899997 8999999999754 5679999999985
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=99.05 E-value=3.9e-10 Score=96.08 Aligned_cols=76 Identities=20% Similarity=0.305 Sum_probs=59.1
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcc
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWT 177 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~ 177 (551)
|-.++|++++||+|+ |.|.... ++++|+++. +||.+. +.++.+.||+++
T Consensus 30 F~P~~i~v~~Gd~V~--~~N~d~~---------------------~H~v~~~~~-----~~g~~~--~~~~~~~pG~~~- 78 (105)
T 2ov0_A 30 YETPELHVKVGDTVT--WINREAM---------------------PHNVHFVAG-----VLGEAA--LKGPMMKKEQAY- 78 (105)
T ss_dssp ESSSEEEECTTCEEE--EEECSSS---------------------CBCCEECTT-----TSSSSC--EECCCBCTTEEE-
T ss_pred EcCCEEEECCCCEEE--EEECCCC---------------------CEEEEEcCC-----CCCccc--ccccccCCCCEE-
Confidence 347899999999965 5688654 688998863 256543 555568899988
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.| ..+|+|||||+.|. ||.|.|+|+
T Consensus 79 --~~tf---~~~G~y~y~C~~H~--------gM~G~i~V~ 105 (105)
T 2ov0_A 79 --SLTF---TEAGTYDYHCTPHP--------FMRGKVVVE 105 (105)
T ss_dssp --EEEE---CSCEEEEEECSSCT--------TCEEEEEEC
T ss_pred --EEEe---CCCEEEEEEeCCCC--------CCEEEEEEC
Confidence 7877 38999999999973 899999985
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=99.04 E-value=5.1e-10 Score=96.39 Aligned_cols=84 Identities=17% Similarity=0.068 Sum_probs=64.6
Q ss_pred EEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCccee
Q 008840 87 FAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFT 166 (551)
Q Consensus 87 ~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t 166 (551)
.+|+ +.++++.|++++||+|+++++|.... .+++++.+. | ++
T Consensus 29 ~~~~-----~~f~p~~i~v~~G~~V~~~~~n~d~~---------------------~H~~~i~~~-------~-----~~ 70 (112)
T 1iby_A 29 RAFN-----VLNEPETLVVKKGDAVKVVVENKSPI---------------------SEGFSIDAF-------G-----VQ 70 (112)
T ss_dssp EEEE-----EEEESCEEEEETTCEEEEEEEECSSS---------------------CEEEEEGGG-------T-----EE
T ss_pred EEEe-----eEEcCCEEEEeCCCEEEEEEEECCCC---------------------eEEEEEcCC-------C-----ce
Confidence 3666 67789999999999999999998643 344444322 2 22
Q ss_pred ccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 167 AGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 167 ~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
..+.||+++ +|.|+++ ++|+||||||.|+.. .+|.|.++|+|
T Consensus 71 -~~i~pG~~~---~~~f~~~-~~G~y~~~C~~~~~~-----~~M~g~i~V~~ 112 (112)
T 1iby_A 71 -EVIKAGETK---TISFTAD-KAGAFTIWCQLHPKN-----IHLPGTLNVVE 112 (112)
T ss_dssp -EEECTTCEE---EEEEECC-SCEEEEEBCSSSCTT-----TBCCEEEEEEC
T ss_pred -eEeCCCCEE---EEEEECC-CCEEEEEECCCCCch-----HHCEEEEEEeC
Confidence 257899999 9999986 899999999998642 34999999974
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-10 Score=127.20 Aligned_cols=94 Identities=12% Similarity=0.070 Sum_probs=70.6
Q ss_pred CccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC
Q 008840 83 PTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK 162 (551)
Q Consensus 83 ~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~ 162 (551)
...+|+|+ ++|++|+|++++||+|+++++|.+... ...++++.++. |.
T Consensus 500 ~V~m~~~n-----~~f~pp~I~V~~Gd~V~~~ltN~d~~~------------------Dv~Hgf~ip~~-------gv-- 547 (595)
T 1fwx_A 500 RVYMSSVA-----PSFSIESFTVKEGDEVTVIVTNLDEID------------------DLTHGFTMGNY-------GV-- 547 (595)
T ss_dssp EEEEEEET-----TEESCSEEEEETTCEEEEEEEECCCST------------------TCCEEEEETTT-------TE--
T ss_pred ceeEEEec-----CcccCCEEEEECCCEEEEEEEeCCCCC------------------CceeeEEecCC-------Cc--
Confidence 45678987 999999999999999999999986531 01344444432 22
Q ss_pred cceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCC
Q 008840 163 SWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP 219 (551)
Q Consensus 163 ~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp 219 (551)
. ..+.||+++ +|.|.++ ++|+||||||..... .| .||+|.|+|+++
T Consensus 548 ---~-~~i~PG~t~---t~~Fta~-~pGtY~yhC~e~Cg~-~H--~gM~G~IiV~p~ 593 (595)
T 1fwx_A 548 ---A-MEIGPQMTS---SVTFVAA-NPGVYWYYCQWFCHA-LH--MEMRGRMLVEPK 593 (595)
T ss_dssp ---E-EEECTTCEE---EEEEECC-SCEEEEEECCSCCST-TC--TTCEEEEEEECC
T ss_pred ---c-eeeCCCCeE---EEEEECC-CCEEEEEECCCCCCC-Cc--cCCEEEEEEEcC
Confidence 1 247899998 9999996 999999999953332 23 399999999943
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=7.6e-08 Score=103.94 Aligned_cols=232 Identities=11% Similarity=0.065 Sum_probs=130.2
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCC
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPT 175 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~ 175 (551)
+-|+|+|++|+++|+|+.|.-... ...+|++|....- ..||.+-.++. .-.|.||++
T Consensus 187 ~~~~~~v~~G~~~RlRliN~~~~~--------------------~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 187 PLSVITVEVGKRYRMRLVSISCDP--------------------NYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CCCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCE
T ss_pred CceEEEEcCCCEEEEEEEecCCCe--------------------eEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceE
Confidence 457999999999999999975542 5788888865322 37887643332 124789999
Q ss_pred cceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeE-EEEEeeecCCCceEecC
Q 008840 176 WTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPL-FVFDRNFLTNGSIYMNS 254 (551)
Q Consensus 176 ~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~l-vl~d~~~~~~g~~~~~~ 254 (551)
+ +.-+.+++.+|.||.++..... ......|..-+++..+.... . .|......... .+.+..+..-.....+.
T Consensus 247 ~---dvlv~~~~~~g~y~i~a~~~~~-~~~~~~~~~~ail~Y~~~~~-~--~p~~~~~~~~~~~~~~~~L~p~~~~~~p~ 319 (495)
T 3t6v_A 247 Y---SFVLNANQPVGNYWIRANPNSG-GEGFDGGINSAILRYDGATT-A--DPVTVASTVHTKCLIETDLHPLSRNGVPG 319 (495)
T ss_dssp E---EEEEECCSCSSEEEEEEEESSS-SCSCGGGTTEEEEEETTSCS-S--CCCCCCCSSCSSBCCGGGCCBSSCCCCSS
T ss_pred E---EEEEECCCCCceEEEEEecccC-ccccCCCceEEEEEECCCCC-C--CCCCCCCCCCccccccccccccccccCCC
Confidence 8 8888888778999999874211 01112333334444432211 0 01100000000 00000000000000000
Q ss_pred CCC--CCCCCCCCCCccCCceEEECCcccC-------------------------ceeecC-eEEEEEEEecCCCceEEE
Q 008840 255 TGN--NPSIHPQWQPEYFGDVIVVNGKAWP-------------------------RMTVRR-RKYRFRIINASNARFFRF 306 (551)
Q Consensus 255 ~g~--~~~~~~~~~~~~~gd~~lVNG~~~P-------------------------~~~v~~-~~~RlRllNas~~~~~~l 306 (551)
... ..+..-...-++.+..++|||+.+. .+.++. ++++|.|.|........+
T Consensus 320 ~~~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~ 399 (495)
T 3t6v_A 320 NPHQGGADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPF 399 (495)
T ss_dssp CSSTTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEE
T ss_pred ccCCCCCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcce
Confidence 000 0000000000112346889998651 145555 799999984332334456
Q ss_pred EEcCCceEEEEEcCCCCC---CCceEecEEEEcc-CceEEEEEEcCCCCCceEEEecC
Q 008840 307 FFTNGLRFIHVGSDSAYL---GKPVVTNDTVLAP-AEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 307 ~l~~g~~~~via~DG~~l---~~P~~~~~l~l~p-geR~dVlv~~~~~~g~~~~L~~~ 360 (551)
|| |||.|+|++.+|... ..|...|++.+.+ |+.+.|-++++++ | .+.++..
T Consensus 400 HL-HGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnP-G-~W~~HCH 454 (495)
T 3t6v_A 400 HL-HGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNP-G-PWFLHCH 454 (495)
T ss_dssp EE-TTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCSC-E-EEEEEES
T ss_pred ee-cCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCCC-e-eEEEEec
Confidence 66 899999999988643 3588899999997 9999888877765 3 6666654
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.83 E-value=3.9e-09 Score=89.70 Aligned_cols=85 Identities=12% Similarity=0.124 Sum_probs=60.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCc--ceeccccCCCCCcc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKS--WFTAGFEEKGPTWT 177 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~--~~t~~~i~pG~~~~ 177 (551)
-++|++++||+|+ |.|.... ++++|+|+...+. .+|.... ......+.||+++
T Consensus 19 P~~i~v~~Gd~V~--~~n~~~~---------------------~H~~~~~~~~~~~-~~g~~~~~~~~~~~~~~pG~~~- 73 (106)
T 2gim_A 19 PAKLTIKPGDTVE--FLNNKVP---------------------PHNVVFDAALNPA-KSADLAKSLSHKQLLMSPGQST- 73 (106)
T ss_dssp SSEEEECTTCEEE--EEECSSS---------------------CCCBEECSSSSTT-CCHHHHHHHCBCSCCCSTTCEE-
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------CceEEEeCCCCcc-cccccchhccccceeeCCCCEE-
Confidence 4799999999865 5587543 6888888765432 2332100 0122247899998
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.|+++..+|+||||||.| ..+||.|.|+|+
T Consensus 74 --~~~f~~~~~~G~y~y~C~~H------~~~GM~G~i~V~ 105 (106)
T 2gim_A 74 --STTFPADAPAGEYTFYCEPH------RGAGMVGKITVA 105 (106)
T ss_dssp --EEECCTTCCSEEEEEECTTT------GGGTCEEEEEEC
T ss_pred --EEEEecCCCCceEEEEeCCh------hhcCcEEEEEEc
Confidence 89998745899999999944 458999999997
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=2.7e-07 Score=101.17 Aligned_cols=74 Identities=15% Similarity=0.197 Sum_probs=57.3
Q ss_pred eeecC-eEEEEEEEecCCC-----ceEEEEEcCCceEEEEEcC-CCC---------CCCceEecEEEEccCceEEEEEEc
Q 008840 284 MTVRR-RKYRFRIINASNA-----RFFRFFFTNGLRFIHVGSD-SAY---------LGKPVVTNDTVLAPAEIADVVIDF 347 (551)
Q Consensus 284 ~~v~~-~~~RlRllNas~~-----~~~~l~l~~g~~~~via~D-G~~---------l~~P~~~~~l~l~pgeR~dVlv~~ 347 (551)
+.++. ++++|.|.|.+.. ....+|| |||.|+|++.. |.+ +..|...|++.+.||+.+.|.+++
T Consensus 419 ~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HL-HGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~a 497 (552)
T 1aoz_A 419 YQFKIGEVVDVILQNANMMKENLSETHPWHL-HGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 497 (552)
T ss_dssp EEECTTCEEEEEEEECCCSSTTCCCCEEEEE-TTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred EEecCCCEEEEEEeCCcccccccCCCCCEEE-cCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEc
Confidence 55665 8999999998742 2456677 89999999984 553 346888999999999999999988
Q ss_pred CCCCCceEEEecC
Q 008840 348 SESTSDVAILAND 360 (551)
Q Consensus 348 ~~~~g~~~~L~~~ 360 (551)
+++ | .+.++..
T Consensus 498 DNP-G-~W~~HCH 508 (552)
T 1aoz_A 498 DNP-G-VWAFHCH 508 (552)
T ss_dssp CSC-E-EEEEEES
T ss_pred CCC-e-EEEEEee
Confidence 765 3 6666654
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.1e-07 Score=101.43 Aligned_cols=199 Identities=11% Similarity=0.035 Sum_probs=119.3
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEee--CC---CCCC-CCCCCCCCc-ce-
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHL--HG---GIDE-PESDGYAKS-WF- 165 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~--HG---~~~~-~~~DG~p~~-~~- 165 (551)
+||+ +.|+|+|++| ++|+|+.|.-... ...+|+ +| .... -..||.+-. ++
T Consensus 174 iNG~-~~p~~~v~~g-~~RlRliNa~~~~--------------------~~~~~i~~~~~~~~~~~via~DG~~~~~P~~ 231 (448)
T 3aw5_A 174 VNGV-KDAVFKLSGG-SYRLRLVNGSNAR--------------------LYMLSIVKKNGDVVPMRLIAVDQGFLARPIE 231 (448)
T ss_dssp ETTE-ETCEEEEEEE-EEEEEEEECSSSC--------------------CEEEEEEETTSCEECEEEEEETTEEEEEEEE
T ss_pred ECCc-ccceEEECCC-eEEEEEEcCCCcc--------------------eEEEEEEcCCCCCccEEEEEeCCCccCCceE
Confidence 3575 4699999999 9999999986652 688999 87 3221 127887522 11
Q ss_pred -eccccCCCCCcceeeEEEEcCccCceeEEeccCCCch-hh--hh------hccceEEEEEe--CCCCC-CCCCC---CC
Q 008840 166 -TAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLT-RV--NL------LAGLIGAYILR--HPDVE-APLRL---PS 229 (551)
Q Consensus 166 -t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t-~~--qv------~~GL~G~~iV~--dp~~~-~~~~l---P~ 229 (551)
..-.+.||+++ +.-+.++ .+.||...+..... .. .+ ...-....+++ +.... .+..| |.
T Consensus 232 ~~~l~l~pgeR~---dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~ 306 (448)
T 3aw5_A 232 VRALFLAPAERA---EVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPP 306 (448)
T ss_dssp ESCEEECTTCEE---EEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCC
T ss_pred eceEEECCcceE---EEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCC
Confidence 22247899987 6666664 47889888764310 00 00 00001111111 11100 00001 10
Q ss_pred C---CcCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC----cee-ecC-eEEEEEEEecCC
Q 008840 230 G---DVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP----RMT-VRR-RKYRFRIINASN 300 (551)
Q Consensus 230 ~---~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P----~~~-v~~-~~~RlRllNas~ 300 (551)
. ...++.+.|. .....++|||+.+. .+. ++. ++++|+|.|.+.
T Consensus 307 ~~~~~~~~~~~~l~----------------------------~~~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~~ 358 (448)
T 3aw5_A 307 EPPKPTRTRRFALS----------------------------LSGMQWTINGMFWNASNPLFEHVSVEGVELWEIVNDKA 358 (448)
T ss_dssp CCCCCSEEEEEEEE----------------------------EETTEEEETTBCCCTTCTTCCCEEECEEEEEEEEECSS
T ss_pred CCCCCCceEEEEEe----------------------------CCCceeeECCCcCCCCCCceeccCCCCeEEEEEEcCCC
Confidence 0 0000001000 00125889999863 356 666 899999999884
Q ss_pred CceEEEEEcCCceEEEEEcCCCCC--------------CCceEecEEEEccCceEEEEEEcC
Q 008840 301 ARFFRFFFTNGLRFIHVGSDSAYL--------------GKPVVTNDTVLAPAEIADVVIDFS 348 (551)
Q Consensus 301 ~~~~~l~l~~g~~~~via~DG~~l--------------~~P~~~~~l~l~pgeR~dVlv~~~ 348 (551)
.....+|| ||+.|+|++.+|... ..|...|++.+.||+++.|++.|.
T Consensus 359 ~~~HP~HL-HG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~ 419 (448)
T 3aw5_A 359 SMPHPMHL-HGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFD 419 (448)
T ss_dssp SCCEEEEE-SSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEEC
T ss_pred CCCcCEEE-CCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEec
Confidence 34456667 899999999998763 123578999999999999998887
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.8e-07 Score=99.01 Aligned_cols=221 Identities=12% Similarity=0.096 Sum_probs=128.7
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCC-c--ceeccc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAK-S--WFTAGF 169 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~-~--~~t~~~ 169 (551)
.||+. .|+|.|++|+ |+|+.|.-... ...+|++|....- ..||..- . .+..-.
T Consensus 216 vNG~~-~p~l~v~~g~--RlRliNa~~~~--------------------~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~ 272 (481)
T 3zx1_A 216 INGQF-KPKIKLATNE--RIRIYNATAAR--------------------YLNLRIQGAKFILVGTDGGLIEKTIYKEELF 272 (481)
T ss_dssp ETTEE-SCEEEEETTE--EEEEEECCSSC--------------------CEEEEETTCEEEEEEETTEEEEEEEEESSEE
T ss_pred ECCcc-CceEEecCCC--EEEEEecCCCe--------------------EEEEEECCCceEEEEcCCCccCCceEeCeEE
Confidence 35754 6899999999 99999986653 6889999876332 2787431 1 112235
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchh--hhhh--ccceEEEEEeCCCCCCCCC---CCC--CCcCceeEEEE
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTR--VNLL--AGLIGAYILRHPDVEAPLR---LPS--GDVFDRPLFVF 240 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~--~qv~--~GL~G~~iV~dp~~~~~~~---lP~--~~~~e~~lvl~ 240 (551)
|.||+++ +.-+... +.++|..-++..+... .... .....-+-+.......+.. +|. ..+.++.+.++
T Consensus 273 l~pgeR~---dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~ 348 (481)
T 3zx1_A 273 LSPASRV---EVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMS 348 (481)
T ss_dssp ECTTCEE---EEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEE
T ss_pred ECCccEE---EEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEe
Confidence 7899988 7777775 5777777665432100 0000 0000111122100000100 111 00112222221
Q ss_pred EeeecCCCceEecCCCCCCCCCCCCCCccC------CceEEECCcccC----ceeecC-eEEEEEEEecCCCceEEEEEc
Q 008840 241 DRNFLTNGSIYMNSTGNNPSIHPQWQPEYF------GDVIVVNGKAWP----RMTVRR-RKYRFRIINASNARFFRFFFT 309 (551)
Q Consensus 241 d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~------gd~~lVNG~~~P----~~~v~~-~~~RlRllNas~~~~~~l~l~ 309 (551)
. +.. ...+.+. .+.. +..++|||+.+. .+.++. ++++|+|.|.+. ....+||
T Consensus 349 ~-----~~~---~~~~~~~-------~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~-~~Hp~Hl- 411 (481)
T 3zx1_A 349 E-----DHM---QMHGMMG-------KSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKSH-MDHPFHI- 411 (481)
T ss_dssp E-----CCS---TTTTGGG-------CCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEEEEEEECSS-SCEEEEE-
T ss_pred c-----cch---hcccccc-------cccccccccccceeEECCEeCCCCCceEEeCCCCEEEEEEEcCCC-CceeEEE-
Confidence 1 100 0000000 0000 124899999873 567777 899999999763 4567777
Q ss_pred CCceEEEEEc--CCCCCC--CceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 310 NGLRFIHVGS--DSAYLG--KPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 310 ~g~~~~via~--DG~~l~--~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
||+.|+|++. ||.... ++...|++.|.|||++.|.++|+.+ | .|.+...
T Consensus 412 HG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~p-G-~w~~HCH 464 (481)
T 3zx1_A 412 HGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFK-G-LRMYHCH 464 (481)
T ss_dssp TTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCSC-E-EEEEEES
T ss_pred eccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCCC-e-eEEEEcC
Confidence 8999999999 887542 3677999999999999999999654 4 6766653
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=8.6e-07 Score=97.23 Aligned_cols=76 Identities=16% Similarity=0.120 Sum_probs=57.3
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCCc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPTW 176 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~~ 176 (551)
-|+|+|++|+++|+|+.|.-... ...+|++|....- ..||.+-.++. .-.|.||+++
T Consensus 214 ~~~~~v~~g~~~RlRliNa~~~~--------------------~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 214 YANVTLTPGKRHRLRILNTSTEN--------------------HFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp CCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEE
T ss_pred ceEEEEcCCCEEEEEEEecCCCc--------------------eEEEEECCCceEEEecCCcccCceEeCeEEEccEEEE
Confidence 37999999999999999987652 5789998875432 27887622221 1247899988
Q ss_pred ceeeEEEEcCccCceeEEeccC
Q 008840 177 TNETYHYHNMQQPGNTWYHDHT 198 (551)
Q Consensus 177 ~~~~y~f~~~~~~Gt~wYH~H~ 198 (551)
+.-+.+++.+|.||.....
T Consensus 274 ---dvlv~~~~~~g~y~i~a~~ 292 (559)
T 2q9o_A 274 ---DVVIDASRAPDNYWFNVTF 292 (559)
T ss_dssp ---EEEEECCSCSSEEEEEEEC
T ss_pred ---EEEEECCCCCCcEEEEEEe
Confidence 8888887778999998875
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.3e-06 Score=95.33 Aligned_cols=215 Identities=12% Similarity=0.073 Sum_probs=126.6
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCcce--ecccc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWF--TAGFE 170 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~--t~~~i 170 (551)
+||+. .|+|+|++|+++|+|+.|.-... ...+|++|....- ..||.+-.++ ..-.|
T Consensus 172 iNG~~-~~~~~v~~g~~~RlRliNa~~~~--------------------~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l 230 (534)
T 1zpu_A 172 VNNTM-NLTWEVQPDTTYLLRIVNVGGFV--------------------SQYFWIEDHEMTVVEIDGITTEKNVTDMLYI 230 (534)
T ss_dssp ETTBS-SCEEECCSSCEEEEEEEECCSSC--------------------CEEEEETTBCEEEEEETTEEEEEEEESCEEE
T ss_pred ECCCC-ceEEEEECCCEEEEEEEeccCCc--------------------eEEEEEcCCeeEEEeccCcCccccEeceEEE
Confidence 35764 69999999999999999986652 5778888764332 2788753222 11247
Q ss_pred CCCCCcceeeEEEEcCcc-CceeEEeccCCCchhhh-h--hccceE-EEEEeCCCCCCCC-----CCCC-C---------
Q 008840 171 EKGPTWTNETYHYHNMQQ-PGNTWYHDHTMGLTRVN-L--LAGLIG-AYILRHPDVEAPL-----RLPS-G--------- 230 (551)
Q Consensus 171 ~pG~~~~~~~y~f~~~~~-~Gt~wYH~H~~g~t~~q-v--~~GL~G-~~iV~dp~~~~~~-----~lP~-~--------- 230 (551)
.||+++ +.-+.+++. .|.||........ ... + .....+ +++..+.....+. .++. -
T Consensus 231 ~~gqR~---dvlv~~~~~~~~~y~i~~~~~~~-~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~ 306 (534)
T 1zpu_A 231 TVAQRY---TVLVHTKNDTDKNFAIMQKFDDT-MLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYE 306 (534)
T ss_dssp CTTCEE---EEEEECCSCSSCCEEEEEEECGG-GSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSS
T ss_pred CccceE---EEEEEcCCCCCCcEEEEEecccc-ccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCC
Confidence 899988 777777644 5789998875321 000 0 001122 2322211100000 0000 0
Q ss_pred -----CcCceeEEEEEeeec--CCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC---------------------
Q 008840 231 -----DVFDRPLFVFDRNFL--TNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP--------------------- 282 (551)
Q Consensus 231 -----~~~e~~lvl~d~~~~--~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P--------------------- 282 (551)
...+..+.+.- .+. .+| ..+++|||+.+.
T Consensus 307 ~~~~~~~~~~~~~l~~-~~~~~~~~----------------------~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~ 363 (534)
T 1zpu_A 307 KEAIYGEPDHVITVDV-VMDNLKNG----------------------VNYAFFNNITYTAPKVPTLMTVLSSGDQANNSE 363 (534)
T ss_dssp CCCCCCSCSEEEEEEE-EEEECTTS----------------------CEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGG
T ss_pred CCCCCCCCCeEEEEEE-EeeccCCc----------------------eeEEEECCCcccCCCCCceeeecccCcccCCCc
Confidence 00011111100 000 000 125667776541
Q ss_pred -------ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCC-------------------CCCCceEecEEEE
Q 008840 283 -------RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSA-------------------YLGKPVVTNDTVL 335 (551)
Q Consensus 283 -------~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~-------------------~l~~P~~~~~l~l 335 (551)
.+.++. ++++|.|.|.+.. ...+|| |||.|+|++.+++ +...|...|++.+
T Consensus 364 ~~~~~~~~~~~~~g~~v~ivi~N~~~~-~HP~HL-HGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V 441 (534)
T 1zpu_A 364 IYGSNTHTFILEKDEIVEIVLNNQDTG-THPFHL-HGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYV 441 (534)
T ss_dssp GGCSSSCEEEECTTCEEEEEEEECSSS-CEEEEE-TTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEE
T ss_pred ccCCCceEEEeCCCCEEEEEEeCCCCC-CCCeEe-cCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEe
Confidence 245665 8999999998743 455666 8999999998864 1235788999999
Q ss_pred ccCceEEEEEEcCCCCCceEEEecC
Q 008840 336 APAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 336 ~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
.||+.+.|.++++++ | .+.++..
T Consensus 442 ~pgg~v~IrF~aDNP-G-~W~~HCH 464 (534)
T 1zpu_A 442 RPQSNFVIRFKADNP-G-VWFFHCH 464 (534)
T ss_dssp CTTCEEEEEEECCSC-E-EEEEEEC
T ss_pred CCCCEEEEEEEeCCC-e-eEEEEeC
Confidence 999999988888764 3 6777664
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=2.7e-07 Score=99.70 Aligned_cols=231 Identities=10% Similarity=0.054 Sum_probs=128.6
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCCC
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGPT 175 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~~ 175 (551)
+-|.|+|++|+++++|+.|.-... ...+|++|....- ..||.+-.++. .-.|.||++
T Consensus 184 ~~~~~~v~~G~~~RlRliNa~~~~--------------------~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 184 ELSVIKVTKGKRYRFRLVSLSCNP--------------------NHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp CCCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCE
T ss_pred CcceEEEcCCCEEEEEEEecCCCe--------------------eEEEEECCCeEEEEEECCcccCceEeeeEEECCCcE
Confidence 457999999999999999986542 5788988875432 27887643322 124789999
Q ss_pred cceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCC-cCceeEEEEEeeecCCCceEecC
Q 008840 176 WTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGD-VFDRPLFVFDRNFLTNGSIYMNS 254 (551)
Q Consensus 176 ~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~-~~e~~lvl~d~~~~~~g~~~~~~ 254 (551)
+ +.-+.+++.+|.||..+...... .....+..-+++..+.... ..|... ..+.. .+.+..+..-.....+.
T Consensus 244 ~---dvlv~~~~~~g~y~i~a~~~~~~-~~~~~~~~~ail~Y~~~~~---~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~ 315 (499)
T 3pxl_A 244 Y---SFVLDANQAVDNYWIRANPNFGN-VGFDGGINSAILRYDGAPA---VEPTTNQTTSVK-PLNEVDLHPLVSTPVPG 315 (499)
T ss_dssp E---EEEEECCSCSSEEEEEEEESSSS-CSCGGGTTEEEEEETTSCS---SCCCCCCCCCSS-BCCGGGCCBSSCCCCSS
T ss_pred E---EEEEECCCCCceEEEEEecccCc-cccCCCceEEEEEeCCCCC---CCCCCCCCCCCc-ccccccccccccccCCC
Confidence 8 88888887789999988642110 0111222223333322211 001100 00000 00010010000000000
Q ss_pred CC--CCCCCCCCCCCccCCceEEECCcccC-------------------------ceeecC-eEEEEEEEecCC--CceE
Q 008840 255 TG--NNPSIHPQWQPEYFGDVIVVNGKAWP-------------------------RMTVRR-RKYRFRIINASN--ARFF 304 (551)
Q Consensus 255 ~g--~~~~~~~~~~~~~~gd~~lVNG~~~P-------------------------~~~v~~-~~~RlRllNas~--~~~~ 304 (551)
.- ..++..-...-++.+..++|||+.+. .+.++. ++++|.|.|.++ ....
T Consensus 316 ~~~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~H 395 (499)
T 3pxl_A 316 APSSGGVDKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPH 395 (499)
T ss_dssp CSSTTCSSEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSC
T ss_pred cccCCCCcEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCc
Confidence 00 00000000000112346788997651 145555 899999985322 2234
Q ss_pred EEEEcCCceEEEEEcCCCCC---CCceEecEEEEcc---CceEEEEEEcCCCCCceEEEecC
Q 008840 305 RFFFTNGLRFIHVGSDSAYL---GKPVVTNDTVLAP---AEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 305 ~l~l~~g~~~~via~DG~~l---~~P~~~~~l~l~p---geR~dVlv~~~~~~g~~~~L~~~ 360 (551)
.+|| |||.|+|++.+|... ..|...|++.+.+ |+.+.|-+.++++ | .+.++..
T Consensus 396 P~HL-HGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnP-G-~W~~HCH 454 (499)
T 3pxl_A 396 PFHL-HGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNP-G-PWFLHCH 454 (499)
T ss_dssp EEEE-TTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSC-E-EEEEEES
T ss_pred ccee-cCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCCC-c-eEEEEeC
Confidence 5666 899999999888642 3588999999986 9999888877764 3 6666654
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=98.65 E-value=9.4e-08 Score=85.40 Aligned_cols=89 Identities=10% Similarity=0.071 Sum_probs=61.4
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCC-----------------CCCCCCCCC
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGID-----------------EPESDGYAK 162 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~-----------------~~~~DG~p~ 162 (551)
-++|+|++||+|+++|+|.-... ++++++|+... .-..++.+.
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~--------------------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~ 93 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQ--------------------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSN 93 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSC--------------------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTT
T ss_pred CCeEEECCCCEEEEEEEeCCCCC--------------------CeeEEEeccccccchhhhhhhhcccccccccCccccc
Confidence 57899999999999999974320 36777766421 000011111
Q ss_pred cceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 163 SWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 163 ~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.+.....+.||+++ ++.|.++ .+|+|+||||.++ |.. ||.|.|+|+
T Consensus 94 ~~~~t~~l~pGet~---~v~f~~~-~pG~y~f~C~~~~----H~~-GM~G~i~V~ 139 (139)
T 2aan_A 94 IIAESPLANGNETV---EVTFTAP-AAGTYLYICTVPG----HYP-LMQGKLVVN 139 (139)
T ss_dssp EEEECCCBCTTCEE---EEEEECC-SSEEEEEECCSTT----TTT-TSEEEEEEC
T ss_pred ccccccccCCCCEE---EEEEECC-CCeEEEEEcCCCC----hHH-cCEEEEEEC
Confidence 11222247899998 9999986 8999999999864 445 999999984
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=98.64 E-value=2.7e-08 Score=88.92 Aligned_cols=47 Identities=15% Similarity=0.197 Sum_probs=41.6
Q ss_pred CCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 489 EQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 489 e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
...|+||+.|.||++.+|.|.++ +|| |+||||+..|++ ||++.|+|.
T Consensus 92 ~~~~~~t~~l~pGet~~v~f~~~--------------~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 92 SNIIAESPLANGNETVEVTFTAP--------------AAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp TTEEEECCCBCTTCEEEEEEECC--------------SSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred ccccccccccCCCCEEEEEEECC--------------CCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 45689999999999999988775 567 999999999999 999999873
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=98.61 E-value=6.5e-07 Score=96.22 Aligned_cols=86 Identities=12% Similarity=0.251 Sum_probs=68.1
Q ss_pred ceEEECCcccC----ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCC--ceEecEEEEccCceEEEE
Q 008840 272 DVIVVNGKAWP----RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGK--PVVTNDTVLAPAEIADVV 344 (551)
Q Consensus 272 d~~lVNG~~~P----~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~--P~~~~~l~l~pgeR~dVl 344 (551)
+.++|||+.+. .+.++. +++||+|+|.+......+|| ||+.|+|++.||...+. +...|++.|. ||++.|+
T Consensus 378 ~~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~Hl-Hg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~ 455 (488)
T 3od3_A 378 HANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHI-HGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVL 455 (488)
T ss_dssp GCEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEE-TTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEE
T ss_pred ceeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEE-cCceEEEeccCCCccccccCCceeEEEeC-CCEEEEE
Confidence 35899999864 467776 89999999999655566777 89999999999987631 2358999999 9999999
Q ss_pred EEcCCCCC--ceEEEec
Q 008840 345 IDFSESTS--DVAILAN 359 (551)
Q Consensus 345 v~~~~~~g--~~~~L~~ 359 (551)
|.|+..++ +.|.+..
T Consensus 456 ~~f~~~~~~~G~~m~HC 472 (488)
T 3od3_A 456 VKFNHDAPKEHAYMAHC 472 (488)
T ss_dssp ECBCSCCCGGGCEEEEE
T ss_pred EEeccCCCCCCCEEEeC
Confidence 99987542 3566654
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.8e-06 Score=93.74 Aligned_cols=221 Identities=12% Similarity=0.019 Sum_probs=122.7
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCC-CCC-CCCCCCCC-cc--eecc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG-IDE-PESDGYAK-SW--FTAG 168 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~-~~~-~~~DG~p~-~~--~t~~ 168 (551)
+||+. .|+|.++.| ++|+|+.|.-... ...+|+.|. ... -..||.+- .+ +..-
T Consensus 235 iNG~~-~p~~~v~~~-~~RlRliNa~~~~--------------------~~~~~i~~~~~~~via~DG~~~~~P~~~~~l 292 (513)
T 2wsd_A 235 VNGKV-WPYLEVEPR-KYRFRVINASNTR--------------------TYNLSLDNGGDFIQIGSDGGLLPRSVKLNSF 292 (513)
T ss_dssp ETTEE-SCEEECCSS-EEEEEEEECCSSC--------------------CEEEEETTCCCEEEEEETTEEEEEEEEESEE
T ss_pred ECCcc-cceEEecCC-EEEEEEEccCCcc--------------------eEEEEECCCCeEEEEccCCCcccCceEeCeE
Confidence 46754 789999885 9999999986652 578888876 322 22788541 11 2223
Q ss_pred ccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccc-eEEEEEeCC--C-CCCCCCCCCCCcCc---eeE--EE
Q 008840 169 FEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGL-IGAYILRHP--D-VEAPLRLPSGDVFD---RPL--FV 239 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL-~G~~iV~dp--~-~~~~~~lP~~~~~e---~~l--vl 239 (551)
.|.||+++ +.-+.+++.+|. ||.-............+. ...+-.+.. . ..+...+|.. ..+ .++ .-
T Consensus 293 ~l~pgeR~---dvlv~~~~~~g~-~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~-l~~~~~~~~~~~~ 367 (513)
T 2wsd_A 293 SLAPAERY---DIIIDFTAYEGE-SIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKY-LASYPSVQHERIQ 367 (513)
T ss_dssp EECTTCEE---EEEEECGGGTTC-EEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSB-CSCCGGGCCCCEE
T ss_pred EECCeeeE---EEEEECCCCCCc-EEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCcc-ccCCCCcccCCCc
Confidence 57899988 777777766776 333221110000000001 122222211 1 0111122221 000 000 00
Q ss_pred EEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC---ceeecC-eEEEEEEEecCCCceEEEEEcCCceEE
Q 008840 240 FDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP---RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFI 315 (551)
Q Consensus 240 ~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P---~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~ 315 (551)
.++.+. +..... ......++|||+.+. .+.++. ++++|.|.|.+.. ...+|| ||+.|+
T Consensus 368 ~~~~~~----l~~~~~------------~~g~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~-~HP~Hl-HG~~F~ 429 (513)
T 2wsd_A 368 NIRTLK----LAGTQD------------EYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRG-THPIHL-HLVSFR 429 (513)
T ss_dssp EEEEEE----EEEEEC------------TTSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSS-CEEEEE-SSCCEE
T ss_pred ceEEEE----EEeecC------------CCCCceEeECCccCCCcccEecCCCCEEEEEEEcCCCC-CcCEeE-eCceEE
Confidence 111110 000000 000125679999873 345655 8999999998743 455666 899999
Q ss_pred EEEcCCC---------------CC-----CCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 316 HVGSDSA---------------YL-----GKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 316 via~DG~---------------~l-----~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
|++.+|. .. ..+...|++.|.||+++.|++.|.+.+| .+.+...
T Consensus 430 Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG-~w~~HCH 493 (513)
T 2wsd_A 430 VLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCH 493 (513)
T ss_dssp EEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE-EEEEEES
T ss_pred EEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC-CEEEEcC
Confidence 9998751 10 0234789999999999999999975555 6777654
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.7e-07 Score=78.22 Aligned_cols=82 Identities=15% Similarity=0.132 Sum_probs=56.9
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|++++||+|+ |+|.-.. ++++|+|+...+...|.. ..+.....+.||+++
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~---------------------~H~~~~~~~~~p~~~~~~-~~~~~~~~~~pG~~~--- 69 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGF---------------------PHNIVFDEDAIPSGVNAD-AISRDDYLNAPGETY--- 69 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSC---------------------CEEEEECGGGSCTTCCHH-HHCEEEEECSTTCEE---
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------ceEEEEeCCCCCCccccc-cccccceecCCCCEE---
Confidence 4689999999865 5787543 799999986543322210 001112247899987
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.|. .+|+|+||||.| ..+||.|.|+|+
T Consensus 70 ~~tf~---~~G~y~y~C~~H------~~~gM~G~i~V~ 98 (98)
T 2plt_A 70 SVKLT---AAGEYGYYCEPH------QGAGMVGKIIVQ 98 (98)
T ss_dssp EEECC---SCEEEEEECGGG------GGGTCEEEEEEC
T ss_pred EEEeC---CCeEEEEEcCCc------cccCCeEEEEEC
Confidence 77663 799999999953 457999999984
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=98.50 E-value=5.8e-07 Score=90.82 Aligned_cols=93 Identities=22% Similarity=0.221 Sum_probs=68.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCCCc-----ceeccccCCC
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYAKS-----WFTAGFEEKG 173 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p~~-----~~t~~~i~pG 173 (551)
-|.|+++.||+|++++.|.... .+.+|+||-...-. .+|.... ......+.||
T Consensus 189 ~p~l~v~~Ge~Vr~~liN~~~~---------------------~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PG 247 (299)
T 3t9w_A 189 APTFEANLGERVEWIAIGHGSN---------------------FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPG 247 (299)
T ss_dssp CCEEEEETTCEEEEEEEEESSC---------------------CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTT
T ss_pred cccceecCCCEEEEEEEecccc---------------------ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCc
Confidence 5899999999999999998665 68999999753211 2222110 0111247899
Q ss_pred CCcceeeEEEEcCc--cCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 174 PTWTNETYHYHNMQ--QPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 174 ~~~~~~~y~f~~~~--~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+++ ++.+.+.+ .+|+|+||||.. .+..+||.|.|.|++.+
T Consensus 248 e~~---~~~via~~~dnPG~w~~HCHi~----~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 248 VSF---GFQVIAGEGVGPGMWMYHCHVQ----NHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp CEE---EEEEETTTTTCSEEEEEEECSH----HHHHTTCEEEEEEECTT
T ss_pred eeE---EEEEEEeeCCCCeeEEEEcCCH----HHHhcCCeEEEEEECCC
Confidence 988 77776543 589999999973 46789999999999654
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.1e-06 Score=95.82 Aligned_cols=221 Identities=12% Similarity=0.050 Sum_probs=120.9
Q ss_pred CCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCC------CC--CCCCCCCC-Ccc-
Q 008840 95 TASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGG------ID--EPESDGYA-KSW- 164 (551)
Q Consensus 95 ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~------~~--~~~~DG~p-~~~- 164 (551)
||+ +.|+|.|+.| ++|+|+.|.-... ...++++|. |. --..||.. ..+
T Consensus 207 NG~-~~p~~~v~~~-~~RlRliNa~~~~--------------------~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~ 264 (534)
T 3abg_A 207 NGQ-PWPFKNVEPR-KYRFRFLDAAVSR--------------------SFGLYFADTDAIDTRLPFKVIASDSGLLEHPA 264 (534)
T ss_dssp TTE-ESCBCBCCSS-EEEEEEEECCSSC--------------------CEEEEECCSSSTTCCCCEEEEEETTEEEEEEE
T ss_pred CCc-cCceEEecCc-EEEEEEEecCCcc--------------------eEEEEEecccCcCCCccEEEEEeCCCcccCce
Confidence 564 5789999985 9999999986652 568888772 11 11278862 111
Q ss_pred -eeccccCCCCCcceeeEEEEcCccCc-eeEEeccCCC---chhhhhhccceEEEEEeCCC---CCCCCCCCCCCcCcee
Q 008840 165 -FTAGFEEKGPTWTNETYHYHNMQQPG-NTWYHDHTMG---LTRVNLLAGLIGAYILRHPD---VEAPLRLPSGDVFDRP 236 (551)
Q Consensus 165 -~t~~~i~pG~~~~~~~y~f~~~~~~G-t~wYH~H~~g---~t~~qv~~GL~G~~iV~dp~---~~~~~~lP~~~~~e~~ 236 (551)
+..-.|.||+++ +.-+..++.+| +||....... .....-+....+.+-++... ..+...+|.. -...+
T Consensus 265 ~~~~l~l~pgeR~---dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~-L~~~~ 340 (534)
T 3abg_A 265 DTSLLYISMAERY---EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPAN-LRDVP 340 (534)
T ss_dssp EESCEEECTTCEE---EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCC-CCCCS
T ss_pred EeceEEECCccEE---EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccc-cccCC
Confidence 222347899988 77777766677 6887653211 00000000111222222111 0001111210 00000
Q ss_pred EEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccC------ceeecC-eEEEEEEEecCCCceEEEEEc
Q 008840 237 LFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP------RMTVRR-RKYRFRIINASNARFFRFFFT 309 (551)
Q Consensus 237 lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P------~~~v~~-~~~RlRllNas~~~~~~l~l~ 309 (551)
. .+-....+-.+.+ +..+..++|||+.+. .+.++. ++++|.|.|.+......+||
T Consensus 341 ~--p~~~~~~~~~~~~---------------~~~~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HL- 402 (534)
T 3abg_A 341 F--PSPTTNTPRQFRF---------------GRTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHI- 402 (534)
T ss_dssp C--CCCCCCCCEEEEC---------------SCCCSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEE-
T ss_pred C--CCCccccceEEEE---------------eccCceeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEE-
Confidence 0 0000000000000 011235789999863 234665 79999999987533334455
Q ss_pred CCceEEEEEc-CCCC--CCCc---eEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 310 NGLRFIHVGS-DSAY--LGKP---VVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 310 ~g~~~~via~-DG~~--l~~P---~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
||+.|+|++. +|+. -..+ ...|++.+.||+++.|.+.+.+.+| .+.+...
T Consensus 403 HG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adnpG-~w~~HCH 458 (534)
T 3abg_A 403 HLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPG-VYMFHCH 458 (534)
T ss_dssp SSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSCCE-EEEEEES
T ss_pred CCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCCCc-cEEEecC
Confidence 8999999998 6641 1112 4589999999999999998665555 6777764
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.46 E-value=2.6e-07 Score=77.64 Aligned_cols=74 Identities=15% Similarity=0.019 Sum_probs=57.8
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-.+|++++||+|++.++|.-.. ++++...+... . ..+.||++.
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~---------------------~H~~~~~~~~~------------~-~~~~pg~~~--- 69 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKS---------------------EHTFTIKKLGI------------D-VVVESGKEK--- 69 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSS---------------------CEEEEEGGGTE------------E-EEECTTCEE---
T ss_pred CCEEEECCCCEEEEEEEcCCCc---------------------eEEEEEecCCc------------c-eeecCCcce---
Confidence 4589999999999999997544 56666554321 1 136789888
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.|+.+ .+|+|.|+|..| ...||.|.|+|+
T Consensus 70 ~~~~t~~-~~G~Y~y~C~~H------~~~gM~G~i~Ve 100 (100)
T 4hci_A 70 NITVKPK-SAGTYELICRYH------LLKGMEGKVIVK 100 (100)
T ss_dssp EEEECCC-SCEEEEEECTTT------GGGTCEEEEEEC
T ss_pred eEEEecc-cCceEEEECccc------cCCCCEEEEEEC
Confidence 8999985 999999999865 457999999996
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.39 E-value=5.2e-07 Score=75.25 Aligned_cols=80 Identities=16% Similarity=0.272 Sum_probs=55.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCCCcceeccccCCCCCcce
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYAKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p~~~~t~~~i~pG~~~~~ 178 (551)
-+.|++++||+|+ |.|.-.. ++++|+++...+.. .++.+ .....+.||+++
T Consensus 18 P~~i~v~~G~~V~--~~n~~~~---------------------~H~~~~~~~~~pg~~~~~~~---~~~~~~~pG~~~-- 69 (98)
T 1pcs_A 18 PSTVTIKAGEEVK--WVNNKLS---------------------PHNIVFDADGVPADTAAKLS---HKGLLFAAGESF-- 69 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSC---------------------CEEEEECCSSSCHHHHHHHC---EEEEECSTTCEE--
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------CcEEEEeCCCCCcccccccc---ccccccCCCCEE--
Confidence 4689999999865 5576433 69999987543200 00110 122347899988
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| + .+|+|+|||+.| ..+||.|.|+|+
T Consensus 70 -~~tf--~-~~G~y~~~C~~H------~~~gM~G~i~V~ 98 (98)
T 1pcs_A 70 -TSTF--T-EPGTYTYYCEPH------RGAGMVGKVVVE 98 (98)
T ss_dssp -EEEC--C-SCEEEEEECGGG------TTTTCEEEEEEC
T ss_pred -EEEc--C-CCeEEEEEcCCc------cccCCeEEEEEC
Confidence 7777 3 799999999954 458999999985
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.38 E-value=1.6e-06 Score=77.46 Aligned_cols=88 Identities=17% Similarity=0.208 Sum_probs=60.7
Q ss_pred CcEEEEECCCEEEEEEEe--CCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCC------------C------CCCCCC
Q 008840 100 GPTIEALHGIDTYVTWQN--HLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGI------------D------EPESDG 159 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N--~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~------------~------~~~~DG 159 (551)
-+.|+|++||+|+++|+| .... +++++++... . -+..|
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~---------------------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 89 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGV---------------------QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPD- 89 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCC---------------------CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTT-
T ss_pred CCeEEECCCCEEEEEEECCCCCCC---------------------ceeEEEeccCcchhhhhhhhhhhcccccccCccc-
Confidence 479999999999999999 5443 5777776321 0 00001
Q ss_pred CCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 160 YAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 160 ~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.+..+.....+.||++. ++.|..+ .+|+|||||+..+ |...||.|.|+|.
T Consensus 90 ~~~~~~~t~~l~pG~~~---~~~~~~~-~~G~y~f~C~~~~----H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 90 TPNALAWTAMLNAGESG---SVTFRTP-APGTYLYICTFPG----HYLAGMKGTLTVT 139 (140)
T ss_dssp CTTEEEECCCBCTTEEE---EEEEECC-SSEEEEEECCSTT----TTTTTCEEEEEEE
T ss_pred cccccccceeeCCCcee---EEEEEeC-CCeeEEEEeCCcC----HhhcCCEEEEEEc
Confidence 11111111247899988 8889985 8999999999754 4568999999997
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=5.8e-07 Score=74.82 Aligned_cols=80 Identities=13% Similarity=0.062 Sum_probs=53.4
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|++++||+| +|.|.-.. +++++.++...+ +|.+........+.||+++
T Consensus 18 P~~i~v~~G~~V--~~~n~~~~---------------------~H~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~--- 68 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMNKVG---------------------PHNVIFDKVPAG---ESAPALSNTKLAIAPGSFY--- 68 (97)
T ss_dssp SSEEEECTTCEE--EEEECSSC---------------------CCCBEEEECCTT---SCHHHHCBCCCCCSCSCCE---
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------CeEEEEeCCCCc---cccccccccceecCCCCEE---
Confidence 358999999985 56686433 577777654331 1211100112247799988
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| ..+|+|+|||+.|. .+||.|.|+|+
T Consensus 69 ~~tf---~~~G~y~y~C~~H~------~~gM~G~i~V~ 97 (97)
T 1b3i_A 69 SVTL---GTPGTYSFYCTPHR------GAGMVGTITVE 97 (97)
T ss_dssp EEEC---CSCSEEEEECSSTT------TTTCEEEEEEC
T ss_pred EEEe---CCCeEEEEEccChh------hcCCEEEEEEC
Confidence 7777 38999999999652 47999999984
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-06 Score=71.93 Aligned_cols=74 Identities=23% Similarity=0.286 Sum_probs=53.3
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|++++||+|+ |.|.-.. ++++|.++.. +. ......+.||+++
T Consensus 18 P~~i~v~~Gd~V~--~~n~~~~---------------------~H~v~~~~~~--------~~-~~~~~~~~~g~~~--- 62 (91)
T 1bxv_A 18 PSTIEIQAGDTVQ--WVNNKLA---------------------PHNVVVEGQP--------EL-SHKDLAFSPGETF--- 62 (91)
T ss_dssp SSEEEECTTCEEE--EEECSSC---------------------CEEEEETTCG--------GG-CEEEEECSTTCEE---
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------CcEEEEeCCC--------cc-CcccceeCCCCEE---
Confidence 5689999999976 4576433 6899988721 10 0122247899887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| ..+|+|||||+.| ..+||.|.|+|+
T Consensus 63 ~~~f---~~~G~y~~~C~~H------~~~gM~g~i~V~ 91 (91)
T 1bxv_A 63 EATF---SEPGTYTYYCEPH------RGAGMVGKIVVQ 91 (91)
T ss_dssp EEEC---CSCEEEEEECTTT------GGGTCEEEEEEC
T ss_pred EEEe---CCCEEEEEEeCCC------ccCCCEEEEEEC
Confidence 7776 3899999999965 346999999984
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.9e-06 Score=86.44 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=73.6
Q ss_pred ccEEEeecCCCCCCCCC---cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCC
Q 008840 84 TPVFAFGTSSLTASVPG---PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGY 160 (551)
Q Consensus 84 ~~~~~y~~~~~ng~~PG---Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~ 160 (551)
...|+.| |..-+ +.|.+++|+++++++.|..... ..+.+|+||....-..+|.
T Consensus 180 ~~~~~iN-----G~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~-------------------~~H~fHlhG~~f~v~~~g~ 235 (288)
T 3gdc_A 180 NEFYSVN-----GLPFHFMDFPVKVKQHELVRIHLINVLEYD-------------------PINSFHIHGNFFHYYPTGT 235 (288)
T ss_dssp CSEEEET-----TSTTHHHHSCEEEETTCCEEEEEEECCCSS-------------------SEEEEEETTCCEEEEETTC
T ss_pred cceEEEC-----cccccccCcccccCCCCEEEEEEEeCCCCC-------------------cceeEEEcCCEEEEEcCCC
Confidence 4678876 65432 4799999999999999985420 1489999998643222332
Q ss_pred C---CcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 161 A---KSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 161 p---~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
. ..+...-.+.||+++ +..|.++ .+|+|.||||.. .+..+||.|.+.|.
T Consensus 236 ~~~~~~~~Dtv~v~pg~~~---~v~~~~~-~pG~~~~hCH~~----~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 236 MLTPSEYTDTISQVQGQRG---ILELRFP-YPGKFMFHAHKT----EFAELGWMGFFEVS 287 (288)
T ss_dssp CSSCSEEESEEEEETTCEE---EEEECCC-SCEEEEEECSSH----HHHTTTCEEEEEEE
T ss_pred ccCCCceeeEEEeCCCceE---EEEEECC-CCEEEEEEecCh----HHHhcCCCEEEEEe
Confidence 1 111111246899988 8999986 899999999974 36789999999986
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=98.35 E-value=5.4e-05 Score=82.95 Aligned_cols=227 Identities=9% Similarity=0.013 Sum_probs=125.1
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCcceec--cccCCCCCc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFTA--GFEEKGPTW 176 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t~--~~i~pG~~~ 176 (551)
-++|++++|+++++|+.|.-... ...+|++|....- ..||.+-.++.. -.|.||+++
T Consensus 252 ~~~~~v~~G~~yRlRlINa~~~~--------------------~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRy 311 (580)
T 3sqr_A 252 KFELTFVEGTKYRLRLINVGIDS--------------------HFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRY 311 (580)
T ss_dssp CCEEECCTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEE
T ss_pred ceeEEEcCCCEEEEEEEeccCCc--------------------eeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEE
Confidence 48999999999999999986652 5788888865332 278876332221 247899998
Q ss_pred ceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCCCCCCCCCCCCCcCceeEEEEEeeecCC-CceEecCC
Q 008840 177 TNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPDVEAPLRLPSGDVFDRPLFVFDRNFLTN-GSIYMNST 255 (551)
Q Consensus 177 ~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~~~~~~~lP~~~~~e~~lvl~d~~~~~~-g~~~~~~~ 255 (551)
+.-+.+++.+|.||............-..+..=+|+..+.. .. ..|.....+.. +..++.+ ..+ .+..
T Consensus 312 ---dVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~-~~--~~P~~~~~~~~----~~~~~~~~~~L-~P~~ 380 (580)
T 3sqr_A 312 ---DVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSS-SI--ANPTSVGTTPR----GTCEDEPVASL-VPHL 380 (580)
T ss_dssp ---EEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTT-CC--CCCCCCCCCCC----CCSCCSCGGGC-CBSS
T ss_pred ---EEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCC-CC--CCCCCCCCCcc----chhhccccccc-ccCC
Confidence 88888888899999998764311000011112233333221 10 11110000000 0000000 000 0000
Q ss_pred CCCCCCCCCC----CCcc-CCceEEECCccc------Cc-----------------eeec-----CeEEEEEEEecCC-C
Q 008840 256 GNNPSIHPQW----QPEY-FGDVIVVNGKAW------PR-----------------MTVR-----RRKYRFRIINASN-A 301 (551)
Q Consensus 256 g~~~~~~~~~----~~~~-~gd~~lVNG~~~------P~-----------------~~v~-----~~~~RlRllNas~-~ 301 (551)
.......... .-+. ..-.+.|||..+ |. +.+. .+++.|.|-|.+. .
T Consensus 381 ~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 381 ALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp CCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 0000000000 0000 011345666543 11 2232 3799999999871 2
Q ss_pred ceEEEEEcCCceEEEEEcCCCCC-----------CCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 302 RFFRFFFTNGLRFIHVGSDSAYL-----------GKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 302 ~~~~l~l~~g~~~~via~DG~~l-----------~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
....+|| |||.|+||+.+.+.. ..|...|++.+.|++.+.|-++++++ | .+.++..
T Consensus 461 ~~HP~HL-HGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNP-G-~W~~HCH 527 (580)
T 3sqr_A 461 IWHPIHL-HGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNP-G-SWLLHCH 527 (580)
T ss_dssp CCEEEEE-SSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSC-E-EEEEEEC
T ss_pred cceeeEe-cCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCC-e-eeEEEEC
Confidence 3456666 899999999865433 24788999999999999999988865 3 6666654
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.31 E-value=1.7e-06 Score=76.48 Aligned_cols=74 Identities=22% Similarity=0.321 Sum_probs=52.5
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-++|++++||+|+ |.|.... ++++++.... +|.. .+....+.||+++
T Consensus 59 P~~i~V~~GdtV~--~~N~d~~---------------------~H~v~~~~~~-----~g~~--~~~s~~l~pG~t~--- 105 (132)
T 3c75_A 59 TPEVTIKAGETVY--WVNGEVM---------------------PHNVAFKKGI-----VGED--AFRGEMMTKDQAY--- 105 (132)
T ss_dssp SSEEEECTTCEEE--EEECSSS---------------------CBCCEECTTT-----SSSS--CEECCCBCTTEEE---
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------ceEEEEeCCC-----CCcc--cccccccCCCCEE---
Confidence 3699999999875 5587543 5666664322 2221 2444457899988
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.| + .+|+|+|||-.| .||.|.|+|+
T Consensus 106 ~~tF--~-~~G~y~y~C~~H--------~gM~G~I~V~ 132 (132)
T 3c75_A 106 AITF--N-EAGSYDYFCTPH--------PFMRGKVIVE 132 (132)
T ss_dssp EEEE--C-SCEEEEEECSSC--------TTCEEEEEEC
T ss_pred EEEc--C-CCEEEEEEeCCC--------cCCEEEEEEC
Confidence 7777 3 799999999876 2999999985
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=98.30 E-value=1.4e-06 Score=76.11 Aligned_cols=77 Identities=8% Similarity=-0.063 Sum_probs=53.0
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-..|+|++||+|+ |.|.- . ++++..+....+ +|... + .+.||++|
T Consensus 21 P~~i~V~~GDTV~--f~n~~-~---------------------~Hnv~~~~~~~p---~g~~~--~---~~~pg~t~--- 65 (124)
T 3ef4_A 21 PGFVKVEAGDTVK--FVPTD-K---------------------SHNAESVREVWP---EGVAP--V---KGGFSKEV--- 65 (124)
T ss_dssp SSEEEECTTCEEE--EECSS-S---------------------SCCCEECTTTSC---TTSCC--C---BCCTTCCE---
T ss_pred CCEEEECCCCEEE--EEECC-C---------------------CccEEEeCCcCC---CCccc--c---ccCCCCEE---
Confidence 4699999999865 55543 2 566666633222 23211 2 24688887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|.| + .+|+|||||-.| ..+||.|.|+|.+|.
T Consensus 66 s~TF--~-~~G~y~Y~C~~H------~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 66 VFNA--E-KEGLYVLKCAPH------YGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEEC--C-SSEEEEEECTTT------GGGTCEEEEEESSCT
T ss_pred EEEe--C-CCeEEEEEcCCC------CcCCCEEEEEECCCC
Confidence 7777 3 799999999754 468999999999754
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.7e-06 Score=75.90 Aligned_cols=77 Identities=19% Similarity=0.223 Sum_probs=51.5
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|+|++||+|++.+.|. ++++..+....+ +|... + .+.||++|
T Consensus 22 P~~i~V~~GDtVtf~n~~~------------------------~H~v~~~~~~~P---~g~~~--f---~s~pGet~--- 66 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK------------------------GHNSALMKGGAP---EGAET--W---KGKINEEI--- 66 (127)
T ss_dssp SSEEEECTTCEEEEECSSS------------------------SCCCEECTTCSC---TTCCC--C---BCCTTCCC---
T ss_pred CCEEEECCCCEEEEEECCC------------------------CceEEEccCcCC---CCccc--e---ecCCCCEE---
Confidence 5799999999966555442 244444322111 22211 2 24689988
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|.| ..+|+|||||-.| ..+||.|.|+|.++.
T Consensus 67 s~TF---~~pG~y~y~C~~H------~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 67 TVTL---SKPGVYMYQCAPH------VGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEEC---CSCEEEEEECTTT------GGGTCEEEEEESSCT
T ss_pred EEEe---CCCeEEEEEeCCC------CcCCcEEEEEECcCC
Confidence 7777 3899999999965 458999999999753
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.24 E-value=1.8e-06 Score=72.50 Aligned_cols=80 Identities=13% Similarity=0.061 Sum_probs=52.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCC-------CCCcceeccccCC
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDG-------YAKSWFTAGFEEK 172 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG-------~p~~~~t~~~i~p 172 (551)
-++|++++||+|+ |.|.-.. +++++++.- ...++ .+........+.|
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~---------------------~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p 69 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGET---------------------GHNIVFDIP---AGAPGTVASELKAASMDENDLLSED 69 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSS---------------------CBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTT
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------CeEEEEeCc---ccccccccchhhcccccccceecCC
Confidence 5789999999876 5686433 577777621 11110 0110011223678
Q ss_pred CCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 173 GPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 173 G~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
|+++ ++.| ..+|+|+|||+.| ..+||.|.|+|+
T Consensus 70 G~~~---~~tf---~~~G~y~y~C~~H------~~~gM~G~i~V~ 102 (102)
T 1kdj_A 70 EPSF---KAKV---STPGTYTFYCTPH------KSANMKGTLTVK 102 (102)
T ss_dssp BCEE---EECC---CSCEEEEEECSTT------GGGTCEEEEEEC
T ss_pred CCEE---EEEe---CCCeEEEEEeCCC------cccCCeEEEEEC
Confidence 9887 7777 3899999999954 457999999985
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=98.23 E-value=3.2e-06 Score=73.76 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=51.3
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-..|+|++||+|++.+.| . ++++..+....+ +|... + .+.||++|
T Consensus 20 P~~i~V~~GdtV~f~~~~---~---------------------~H~v~~~~~~~P---~g~~~--f---~~~pg~t~--- 64 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTD---K---------------------SHNVEAIKEILP---EGVES--F---KSKINESY--- 64 (123)
T ss_dssp SSEEEECTTEEEEEEESS---T---------------------TCCCEECTTSSC---TTCCC--C---BCCTTCCE---
T ss_pred CCEEEECCCCEEEEEECC---C---------------------CceEEEcCCcCC---CCccc--e---ecCCCCEE---
Confidence 469999999997777665 2 344444422111 23211 2 24588887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
+|.| + .+|+|||+|-.| ..+||.|.|+|.+
T Consensus 65 s~TF--~-~pG~y~y~C~~H------~~~GM~G~I~V~~ 94 (123)
T 3erx_A 65 TLTV--T-EPGLYGVKCTPH------FGMGMVGLVQVGD 94 (123)
T ss_dssp EEEE--C-SCEEEEEECGGG------TTTTCEEEEEESS
T ss_pred EEEe--C-CCeEEEEEeCCC------CcCCcEEEEEECC
Confidence 7777 3 799999999964 4689999999996
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.18 E-value=6e-06 Score=68.85 Aligned_cols=80 Identities=13% Similarity=0.090 Sum_probs=54.0
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC----cceeccccCCCCC
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK----SWFTAGFEEKGPT 175 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~----~~~t~~~i~pG~~ 175 (551)
-..|++++||+| +|+|.-.. ++++|+++...+. |... .......+.||++
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~---------------------~H~~~~~~~~~p~---g~~~~~~~~~~~~~~~~~G~~ 69 (99)
T 1byp_A 16 PSDLSIASGEKI--TFKNNAGF---------------------PHNDLFDKKEVPA---GVDVTKISMPEEDLLNAPGEE 69 (99)
T ss_dssp SSEEEECTTEEE--EEEECSSC---------------------CBCCEECTTSSCT---TCCHHHHSCCTTCCBCSTTCE
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------cceEEEeCCCCcc---ccccccccccccceeeCCCCE
Confidence 468999999975 56787543 6888888754321 2110 0000113678988
Q ss_pred cceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 176 WTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 176 ~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+ ++.|. .+|+|+|||+.| ..+||.|.|+|+
T Consensus 70 ~---~~~f~---~~G~y~~~C~~H------~~~gM~G~i~V~ 99 (99)
T 1byp_A 70 Y---SVTLT---EKGTYKFYCAPH------AGAGMVGKVTVN 99 (99)
T ss_dssp E---EEEEC---SCEEEEEECGGG------TTTTCEEEEEEC
T ss_pred E---EEEeC---CCcEEEEEcCCc------cccCCEEEEEEC
Confidence 7 77773 799999999954 357999999984
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.15 E-value=7.3e-06 Score=68.37 Aligned_cols=83 Identities=13% Similarity=0.098 Sum_probs=52.9
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCC-CCcceeccccCCCCCcce
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGY-AKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~-p~~~~t~~~i~pG~~~~~ 178 (551)
-+.|++++||+| +|+|.-.. ++++++++...+...+.. .........+.||+++
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~---------------------~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~-- 70 (99)
T 1plc_A 16 PSEFSISPGEKI--VFKNNAGF---------------------PHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETF-- 70 (99)
T ss_dssp SSEEEECTTCEE--EEEECSSC---------------------CBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEE--
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------ceEEEEeCCCCcccccccccccccCccccCCCCEE--
Confidence 469999999976 55787443 577777764332111100 0000000136789877
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| + .+|+|+|||+.| ..+||.|.|+|+
T Consensus 71 -~~tf--~-~~G~y~~~C~~H------~~~gM~G~i~V~ 99 (99)
T 1plc_A 71 -EVAL--S-NKGEYSFYCSPH------QGAGMVGKVTVN 99 (99)
T ss_dssp -EEEC--C-SCEEEEEECGGG------TTTTCEEEEEEC
T ss_pred -EEEE--C-CCceEEEEcCCC------cccCCEEEEEEC
Confidence 7766 3 899999999954 357999999984
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=97.90 E-value=4.6e-05 Score=63.40 Aligned_cols=80 Identities=15% Similarity=0.076 Sum_probs=53.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC--cceeccccCCCCCcc
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK--SWFTAGFEEKGPTWT 177 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~--~~~t~~~i~pG~~~~ 177 (551)
-++|++++||+|+ |.|.-.. ++++.+.....+ +|.-. .......+.||+++
T Consensus 17 P~~i~v~~GdtV~--~~n~~~~---------------------~H~v~~~~~~~p---~g~~~~~~~~~~~~~~~g~~~- 69 (98)
T 1iuz_A 17 PSKISVAAGEAIE--FVNNAGF---------------------PHNIVFDEDAVP---AGVDADAISYDDYLNSKGETV- 69 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSC---------------------CEEEEECTTSSC---TTCCHHHHCEEEEECSTTCEE-
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------CEEEEEeCCCCc---cccccccccccccccCCCCEE-
Confidence 5699999999855 5676433 688877753222 12110 00111246789987
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| + .+|+|+|+|-.| ..+||.|.|+|+
T Consensus 70 --~~tf--~-~~G~y~y~C~~H------~~~gM~G~I~V~ 98 (98)
T 1iuz_A 70 --VRKL--S-TPGVYGVYCEPH------AGAGMKMTITVQ 98 (98)
T ss_dssp --EEEC--C-SCEEEEEECTTT------GGGTCEEEEEEC
T ss_pred --EEEc--C-CCEEEEEEchhh------ccCCCEEEEEEC
Confidence 7777 3 899999999875 347999999985
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=5e-05 Score=66.14 Aligned_cols=37 Identities=14% Similarity=0.192 Sum_probs=29.8
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
..||+++ +|.| + .+|+|||+|-.| ..+||.|.|+|.+
T Consensus 58 ~~pG~t~---~~tF--~-~~G~y~y~C~~H------~~~gM~G~I~V~~ 94 (123)
T 1paz_A 58 SKINENY---VLTV--T-QPGAYLVKCTPH------YAMGMIALIAVGD 94 (123)
T ss_dssp CCTTCCE---EEEC--C-SCEEEEEECTTT------GGGTCEEEEEESS
T ss_pred cCCCCEE---EEEe--C-CCEEEEEEeCCc------ccCCCEEEEEEcC
Confidence 3588877 7777 3 799999999854 4579999999986
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=97.80 E-value=1.1e-05 Score=67.93 Aligned_cols=43 Identities=26% Similarity=0.418 Sum_probs=35.0
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+|++.+.||++.++ +|..+ +.+| |.|||| .|.+.||++.|.|.
T Consensus 61 ~~~~~i~pG~~~~~--~f~~~-----------~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 61 HSQLMFSPGESYEI--TFSSD-----------FPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECSTTCEEEE--EECTT-----------SCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ccccccCCCCeEEE--EEecC-----------CCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 58899999999988 55310 1567 999999 79999999999885
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.80 E-value=7e-05 Score=63.34 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=50.2
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-..|++++||+|+ |.|.-.. ++++.+..... |. ..+....+.||+++
T Consensus 33 P~~i~V~~G~tV~--~~N~d~~---------------------~H~v~~~~~~~-----~~--~~~~s~~l~~g~~~--- 79 (106)
T 1id2_A 33 TPEVTIKAGETVY--WVNGEVM---------------------PHNVAFKKGIV-----GE--DAFRGEMMTKDQAY--- 79 (106)
T ss_dssp SSEEEECTTCEEE--EEECSSS---------------------CBCCEECTTTS-----SS--SCEECCCBCTTEEE---
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------cEEEEEeCCCC-----Cc--ccccccccCCCCEE---
Confidence 3699999999875 5576433 45555443221 11 11333347789887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| + .+|+|+|+|-.| .||.|.|+|+
T Consensus 80 ~~tf--~-~~G~y~~~C~~H--------~~M~G~I~V~ 106 (106)
T 1id2_A 80 AITF--N-EAGSYDYFCTPH--------PFMRGKVIVE 106 (106)
T ss_dssp EEEE--C-SCEEEEEECSSC--------TTCEEEEEEC
T ss_pred EEEe--C-CCEEEEEEeCCC--------CCCEEEEEEC
Confidence 7777 3 799999999886 2999999985
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.77 E-value=5.6e-05 Score=65.81 Aligned_cols=37 Identities=8% Similarity=0.178 Sum_probs=30.0
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
+.||+++ +|.| + .+|+|+|+|..| ..+||.|.|+|.+
T Consensus 58 ~~pG~t~---~~tF--~-~~G~y~y~C~~H------~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEA---VVKF--D-KEGVYGFKCAPH------YMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCE---EEEC--C-SCEEEEEECSTT------TTTTCEEEEEESS
T ss_pred cCCCCEE---EEEe--C-CCeEEEEEeCCc------cccCCEEEEEEcC
Confidence 4588887 7777 3 799999999865 3479999999985
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=97.72 E-value=5.5e-05 Score=66.40 Aligned_cols=42 Identities=12% Similarity=0.092 Sum_probs=33.4
Q ss_pred ccCCCCCcceeeEEEEcC--ccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 169 FEEKGPTWTNETYHYHNM--QQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~--~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.+.||+++ ++.|.++ ..+|+|||.|-..|. +.||.|.|+|++
T Consensus 86 ~l~pGet~---svtf~~~~~~~~G~Y~f~C~~pgH-----~~~M~G~i~V~~ 129 (129)
T 1cuo_A 86 IIGGGEKT---SVKFKVSALSKDEAYTYFCSYPGH-----FSMMRGTLKLEE 129 (129)
T ss_dssp CBCTTCEE---EEEEEGGGCCTTSCEEEECCSTTC-----TTTSEEEEEEEC
T ss_pred EECCCCEE---EEEEeccccCCCceEEEEeCCCCc-----hHcCEEEEEEeC
Confidence 47899998 8889874 379999999976542 238999999973
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.72 E-value=2.1e-05 Score=65.24 Aligned_cols=40 Identities=23% Similarity=0.492 Sum_probs=35.3
Q ss_pred cCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 492 WKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 492 wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
|+|++.+.||++.++ .|+ .|| |.|||| .|++.||++.|.|
T Consensus 57 ~~~~~~~~pG~~~~~--tf~--------------~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 57 SRDDYLNAPGETYSV--KLT--------------AAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CEEEEECSTTCEEEE--ECC--------------SCEEEEEECG--GGGGGTCEEEEEE
T ss_pred cccceecCCCCEEEE--EeC--------------CCeEEEEEcC--CccccCCeEEEEE
Confidence 678999999999888 666 457 999999 7999999999987
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=97.69 E-value=4e-05 Score=70.18 Aligned_cols=42 Identities=14% Similarity=0.021 Sum_probs=33.1
Q ss_pred ccCCCCCcceeeEEEEcC-ccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 169 FEEKGPTWTNETYHYHNM-QQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~-~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.|.||+++ ++.|..+ -.+|+|||+|-..|. +.||.|-|+|.+
T Consensus 125 ~l~pGet~---svtf~~~~lkpG~Y~f~Ct~PgH-----~~gM~G~i~V~~ 167 (167)
T 3ay2_A 125 LIGGGEES---SLTLDPAKLADGDYKFACTFPGH-----GALMNGKVTLVD 167 (167)
T ss_dssp CBCTTCEE---EEEECGGGGTTSCEEEECCSTTG-----GGTSEEEEEEEC
T ss_pred eeCCCCEE---EEEEecCCCCCcEEEEEcCCCCc-----hhcCEEEEEEeC
Confidence 47899988 8888763 279999999987552 238999999973
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0034 Score=69.20 Aligned_cols=86 Identities=9% Similarity=0.069 Sum_probs=63.8
Q ss_pred ceEEECCcccC---ceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCC-----------------------
Q 008840 272 DVIVVNGKAWP---RMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYL----------------------- 324 (551)
Q Consensus 272 d~~lVNG~~~P---~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l----------------------- 324 (551)
..+.+||+.+. .+.++. ++++|.|.|.+.. ...+|| ||+.|+||+.+|...
T Consensus 459 ~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HL-HG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (612)
T 3gyr_A 459 KTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHI-HLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEE-SSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred ccccccCccCCCCcceEeCCCCEEEEEEEcCCCC-CcCEeE-CCCcEEEEeecCCcCccccccccccccccccccccccC
Confidence 35778888764 355665 8999999999854 345666 899999998766421
Q ss_pred ---CCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 325 ---GKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 325 ---~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
.++-..|++.+.+|+.+.|.++|.+.+| .+.+...
T Consensus 537 ~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG-~w~~HCH 574 (612)
T 3gyr_A 537 LAPNELGHKDVFQVPGPQGLRVMGKFDGAYG-RFMYHCH 574 (612)
T ss_dssp CCTTCSSCBSEEEECSSEEEEEEEECCSCCE-EEEEEES
T ss_pred cccccCCCCcEEEECCCCEEEEEEEeCCCCc-ceEEcCC
Confidence 1223479999999999999999877765 6776654
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=97.56 E-value=3.1e-05 Score=68.88 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=42.7
Q ss_pred CCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 489 EQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 489 e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
...|++|+.|.||++.++.+.|+ .|| |.|||++..|...||.+.|.|.
T Consensus 91 ~~~~~~t~~l~pG~~~~~~~~~~--------------~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 91 PNALAWTAMLNAGESGSVTFRTP--------------APGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp TTEEEECCCBCTTEEEEEEEECC--------------SSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ccccccceeeCCCceeEEEEEeC--------------CCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 45689999999999999988876 467 9999999999999999999885
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=97.56 E-value=2.4e-05 Score=65.91 Aligned_cols=43 Identities=23% Similarity=0.448 Sum_probs=35.1
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+|++.+.||++.++ .|..+ +.|| |.|||| .|.++||++.|.|.
T Consensus 62 ~~~~~~~pG~~~~~--~f~~~-----------~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 62 HKQLLMSPGQSTST--TFPAD-----------APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp BCSCCCSTTCEEEE--ECCTT-----------CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ccceeeCCCCEEEE--EEecC-----------CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 47889999999988 55210 1568 999999 89999999999885
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=97.48 E-value=6.6e-05 Score=62.24 Aligned_cols=39 Identities=26% Similarity=0.473 Sum_probs=34.4
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+|++.+.||++.++ .|+ .|| |.|||| .|.+.||++.|.|
T Consensus 58 ~~~~~~~pG~~~~~--tf~--------------~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 58 HKGLLFAAGESFTS--TFT--------------EPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEEEECSTTCEEEE--ECC--------------SCEEEEEECG--GGTTTTCEEEEEE
T ss_pred ccccccCCCCEEEE--EcC--------------CCeEEEEEcC--CccccCCeEEEEE
Confidence 67899999999888 565 567 999999 7999999999987
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00035 Score=60.66 Aligned_cols=35 Identities=9% Similarity=0.119 Sum_probs=28.5
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
+.||+++ +|.| ..+|+|||+|-.|. .|.|.|+|.+
T Consensus 58 ~~~g~t~---~~tF---~~~G~y~y~C~~H~--------~M~G~I~V~~ 92 (122)
T 2ux6_A 58 SKINENY---KVTF---TAPGVYGVKCTPHP--------FMVGVVQVGD 92 (122)
T ss_dssp CCTTCCE---EEEE---CSCEEEEEEETTEE--------EEEEEEEESS
T ss_pred cCCCCEE---EEEe---CCCEEEEEEeCCCc--------cCEEEEEEeC
Confidence 4588888 7877 37999999998752 3999999986
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00028 Score=61.86 Aligned_cols=42 Identities=17% Similarity=0.055 Sum_probs=31.7
Q ss_pred ccCCCCCcceeeEEEEcC--ccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 169 FEEKGPTWTNETYHYHNM--QQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~--~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.|.||+++ ++.|..+ .+.|+|||.|-..|. +.||.|.|+|.+
T Consensus 86 ~l~pGet~---svtf~~~~l~~G~~Y~f~C~~pgH-----~~gM~G~i~V~~ 129 (129)
T 2ccw_A 86 VIGGGESD---SVTFDVSKIAAGENYAYFCSFPGH-----WAMMKGTLKLGS 129 (129)
T ss_dssp CBCTTCEE---EEEEEGGGSCTTCCEEEECCSTTG-----GGTSEEEEEECC
T ss_pred EECCCCEE---EEEEeccccCCCceEEEEeCCCCh-----hHcCEEEEEEeC
Confidence 47899998 8889874 333459999976542 348999999963
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00013 Score=60.50 Aligned_cols=39 Identities=21% Similarity=0.400 Sum_probs=34.1
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+|++.+.||++.++ .|+ .|| |.|||+ .|.+.||++.|.|
T Consensus 59 ~~~~~~~~G~~~~~--~f~--------------~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 59 EEDLLNAPGEEYSV--TLT--------------EKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp TTCCBCSTTCEEEE--EEC--------------SCEEEEEECG--GGTTTTCEEEEEE
T ss_pred ccceeeCCCCEEEE--EeC--------------CCcEEEEEcC--CccccCCEEEEEE
Confidence 67788999999888 666 457 999999 8999999999987
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0005 Score=60.17 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=32.1
Q ss_pred ccCCCCCcceeeEEEEcC-ccCce-eEEeccCCCchhhhhhccceEEEEEeC
Q 008840 169 FEEKGPTWTNETYHYHNM-QQPGN-TWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~-~~~Gt-~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.+.||+++ ++.|... -.+|+ |+|.|-..|. +.||.|.|+|.+
T Consensus 85 ~l~pGes~---~vtf~~~~l~~G~~Y~f~C~~PgH-----~~gM~G~i~V~~ 128 (128)
T 2iaa_C 85 VIGGGETD---SVTFDVSKLKEGEDYAFFCSFPGH-----WSIMKGTIELGS 128 (128)
T ss_dssp CBCTTCEE---EEEEESSCCCTTCCEEEECCSTTC-----TTTSEEEEEECC
T ss_pred eeCCCCEE---EEEEeccccCCCceEEEEECCCCh-----hHCCEEEEEEeC
Confidence 47899998 8888873 15775 9999976542 349999999963
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00014 Score=60.15 Aligned_cols=39 Identities=23% Similarity=0.557 Sum_probs=34.2
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
++++.+.||++.++ .|+ .|| |.|||+ .|.++||++.+.|
T Consensus 57 ~~~~~~~~g~~~~~--tf~--------------~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 57 NTKLAIAPGSFYSV--TLG--------------TPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp BCCCCCSCSCCEEE--ECC--------------SCSEEEEECS--STTTTTCEEEEEE
T ss_pred ccceecCCCCEEEE--EeC--------------CCeEEEEEcc--ChhhcCCEEEEEE
Confidence 58889999999888 565 567 999999 9999999999987
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00016 Score=60.39 Aligned_cols=41 Identities=22% Similarity=0.362 Sum_probs=35.0
Q ss_pred Cc-CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 491 GW-KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 491 ~w-kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+| .+++.+.||++.++ .|+ .|| |.|||+ .|.++||.+.|.|
T Consensus 59 ~~~~~~~~~~pG~~~~~--tf~--------------~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 59 SMDENDLLSEDEPSFKA--KVS--------------TPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp SCCTTCCBBTTBCEEEE--CCC--------------SCEEEEEECS--TTGGGTCEEEEEE
T ss_pred cccccceecCCCCEEEE--EeC--------------CCeEEEEEeC--CCcccCCeEEEEE
Confidence 45 47888999999888 555 567 999999 9999999999987
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00024 Score=57.74 Aligned_cols=39 Identities=31% Similarity=0.597 Sum_probs=33.9
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+++.+.||++.++ .|+ .|| |.|||| .|.+.||++.+.|
T Consensus 51 ~~~~~~~~g~~~~~--~f~--------------~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 51 HKDLAFSPGETFEA--TFS--------------EPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEEEECSTTCEEEE--ECC--------------SCEEEEEECT--TTGGGTCEEEEEE
T ss_pred cccceeCCCCEEEE--EeC--------------CCEEEEEEeC--CCccCCCEEEEEE
Confidence 67889999998887 565 567 999999 8999999999987
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0024 Score=55.81 Aligned_cols=41 Identities=12% Similarity=0.143 Sum_probs=31.1
Q ss_pred ccCCCCCcceeeEEEEcCc-cCce-eEEeccCCCchhhhhhccceEEEEEe
Q 008840 169 FEEKGPTWTNETYHYHNMQ-QPGN-TWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~-~~Gt-~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.+.||+++ ++.|.... .+|+ |||.|-..|. +.||.|-|+|.
T Consensus 86 ~l~pGet~---svtf~~~~l~~G~~Y~f~C~~PgH-----~~gM~G~i~V~ 128 (128)
T 1nwp_A 86 VIGAGEKD---SVTFDVSKLAAGEKYGFFCSFPGH-----ISMMKGTVTLK 128 (128)
T ss_dssp CBCTTCEE---EEEEEGGGSCTTSCEEEECCSTTC-----GGGSEEEEEEC
T ss_pred eeCCCCEE---EEEEeccccCCCceEEEEECCCCh-----hHCCEEEEEEC
Confidence 47899998 88888731 4666 9999986542 23899999984
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0021 Score=69.15 Aligned_cols=80 Identities=15% Similarity=0.141 Sum_probs=56.6
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|+|++||+|++.++|..... .+.+++...++ | +.. .+.||++.
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~ve------------------DViHSF~IPsl-------G-----IK~-DaiPGrtn--- 602 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIE------------------DVSHGFVVVNH-------G-----VSM-EISPQQTS--- 602 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCST------------------TCCEEEEETTT-------T-----EEE-EECTTCEE---
T ss_pred CCEEEEecCceeEEEEecCCcCC------------------CceeeeEecCC-------C-----cee-eeCCCCeE---
Confidence 56999999999999999963210 01344443322 1 111 36789887
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.|.++ .+|+|||+|....... | .+|.|.++|+
T Consensus 603 svtFtad-kPGvY~y~CSE~CGa~-H--s~M~G~ViVE 636 (638)
T 3sbq_A 603 SITFVAD-KPGLHWYYCSWFCHAL-H--MEMVGRMMVE 636 (638)
T ss_dssp EEEEECC-SCEEEEEECCSCCSTT-C--TTCEEEEEEE
T ss_pred EEEEEcC-CCEEEEEECCCcCCCC-c--ccceEEEEEe
Confidence 8999996 9999999999644322 2 6899999998
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0013 Score=55.89 Aligned_cols=42 Identities=14% Similarity=0.289 Sum_probs=35.0
Q ss_pred cEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 495 VYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 495 TV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
+..+.||++.++.+.++ .|| |.||||+..|..+ |.+.++|.+
T Consensus 70 ~~~i~pG~~~~~~f~~~--------------~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTAD--------------KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEECC--------------SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred eeEeCCCCEEEEEEECC--------------CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 67899999999977665 568 9999999988766 888888853
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0018 Score=53.59 Aligned_cols=39 Identities=18% Similarity=0.354 Sum_probs=33.1
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+.+.+.||++.++ .|+ .|| |.|||+ .|.++||.+.+.|
T Consensus 59 ~~~~~~~~G~~~~~--tf~--------------~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 59 EEDLLNAKGETFEV--ALS--------------NKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp TTCCBCSTTCEEEE--ECC--------------SCEEEEEECG--GGTTTTCEEEEEE
T ss_pred cCccccCCCCEEEE--EEC--------------CCceEEEEcC--CCcccCCEEEEEE
Confidence 46678899999888 666 467 999999 7999999999887
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=96.29 E-value=0.13 Score=46.74 Aligned_cols=75 Identities=17% Similarity=0.216 Sum_probs=52.4
Q ss_pred cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceee
Q 008840 101 PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNET 180 (551)
Q Consensus 101 Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~ 180 (551)
..|+++.|++|++.++|. +- .++...-++ |. .. .+.||..- .
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DV---------------------iHsf~IP~l-------gi-----k~-da~PG~~n---~ 134 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DV---------------------IHGFHVEGT-------NI-----NV-EVLPGEVS---T 134 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SS---------------------CEEEEETTS-------SC-----EE-EECTTBCE---E
T ss_pred CEEEEeCCCeEEEEEecC-Cc---------------------eEEEEECCC-------Ce-----EE-EecCCcee---E
Confidence 379999999999999996 22 344333222 11 11 24578766 7
Q ss_pred EEEEcCccCceeEEeccC-CCchhhhhhccceEEEEEeC
Q 008840 181 YHYHNMQQPGNTWYHDHT-MGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 181 y~f~~~~~~Gt~wYH~H~-~g~t~~qv~~GL~G~~iV~d 218 (551)
+.|..+ ++|+|+|.|.. .|.- -++|.|-++|++
T Consensus 135 ~~~~~~-kpG~y~g~Cse~CG~~----Hs~M~g~V~V~e 168 (168)
T 3s8f_B 135 VRYTFK-RPGEYRIICNQYCGLG----HQNMFGTIVVKE 168 (168)
T ss_dssp EEEECC-SCEEEEEECCSCCSTT----GGGCEEEEEEEC
T ss_pred EEEEeC-CCEEEEEECCcCCCCC----cCCCEEEEEEeC
Confidence 888885 89999999984 4432 378999999973
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=95.69 E-value=0.0088 Score=49.50 Aligned_cols=38 Identities=21% Similarity=0.234 Sum_probs=32.2
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
..+.||+..++.+.|+ .|| |-|+|. .|...||.+.+.|
T Consensus 61 ~~~~pg~~~~~~~t~~--------------~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 61 VVVESGKEKNITVKPK--------------SAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp EEECTTCEEEEEECCC--------------SCEEEEEECT--TTGGGTCEEEEEE
T ss_pred eeecCCcceeEEEecc--------------cCceEEEECc--cccCCCCEEEEEE
Confidence 4578999999977776 568 999997 5999999998877
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=94.96 E-value=0.13 Score=44.38 Aligned_cols=38 Identities=8% Similarity=0.123 Sum_probs=28.6
Q ss_pred ccCCCCCcceeeEEEEcC--ccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 169 FEEKGPTWTNETYHYHNM--QQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~--~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.|.||+++ +..|... ..+|+|.|-|--| + ||.|.++|.
T Consensus 86 ~l~pGes~---~vtf~~~~l~~~G~y~f~C~gH-------~-~M~G~v~V~ 125 (125)
T 3fsa_A 86 LIGSGEKD---SVTFDVSKLKEGEQYMFFCAAH-------A-AMKGTLTLK 125 (125)
T ss_dssp CBCTTCEE---EEEEEGGGC---CCEEEECSSS-------T-TCEEEEEEC
T ss_pred eeCCCcEE---EEEEeCcCcCCCccEEEEcCCC-------C-CcEEEEEEC
Confidence 47899998 7888874 2789999999943 2 899999884
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=94.81 E-value=0.11 Score=45.52 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=49.9
Q ss_pred EEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeE
Q 008840 102 TIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETY 181 (551)
Q Consensus 102 ti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y 181 (551)
.|+++.|++|++.++|.- . .+++-. +.. |. .. .+.||..- ++
T Consensus 61 ~l~Vp~G~~V~~~vts~D-V---------------------~Hsf~i-----p~~--~~-----k~-d~~PG~~~---~~ 102 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD-V---------------------IHGFHV-----EGT--NI-----NV-EVLPGEVS---TV 102 (135)
T ss_dssp SEEEETTSEEEEEEEBSS-S---------------------CEEEEE-----TTS--SC-----EE-EECBTBCE---EE
T ss_pred EEEEcCCCEEEEEEEeCC-c---------------------cceEEe-----cCC--Cc-----ee-EeCCCCcE---EE
Confidence 899999999999999962 1 344332 211 11 11 24678765 78
Q ss_pred EEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 182 HYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 182 ~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.|..+ .+|+|+|+|...--. .| .+|.|.++|.
T Consensus 103 ~~~~~-~~G~y~~~C~e~CG~-~H--~~M~g~v~V~ 134 (135)
T 2cua_A 103 RYTFK-RPGEYRIICNQYCGL-GH--QNMFGTIVVK 134 (135)
T ss_dssp EEECC-SCEEEEEECCSCCST-TS--TTCEEEEEEE
T ss_pred EEEcC-CCEEEEEECcccCCC-Cc--CCCEEEEEEE
Confidence 88885 999999999542111 12 6899999986
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=94.38 E-value=0.022 Score=51.27 Aligned_cols=38 Identities=21% Similarity=0.265 Sum_probs=30.7
Q ss_pred EeCCCc--EEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 497 KITPGY--VTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 497 ~v~pg~--~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+.||+ +.++.+.+ .|| |.||||+--|...||-+.+.|
T Consensus 113 ~i~PG~sgt~t~tft~---------------~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 113 VPKDGKFGYTDFTWHP---------------TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp CCBTTBEEEEEEEECC---------------CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred ccCCCCceEEEEEEEE---------------CCceEEEECCCCCHHHCCCEEEEEE
Confidence 568999 66664444 246 999999999999999999877
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=93.48 E-value=0.044 Score=45.70 Aligned_cols=33 Identities=27% Similarity=0.550 Sum_probs=25.6
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+.||++.++ .|+ .+| |.|||++ |. ||-+.+.|
T Consensus 71 ~~~pG~~~~~--tf~--------------~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 71 MMKKEQAYSL--TFT--------------EAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CBCTTEEEEE--EEC--------------SCEEEEEECSS--CT--TCEEEEEE
T ss_pred ccCCCCEEEE--EeC--------------CCEEEEEEeCC--CC--CCEEEEEE
Confidence 4789998776 566 567 9999998 65 88887776
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=92.88 E-value=0.084 Score=43.23 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=30.8
Q ss_pred cEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 495 VYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 495 TV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
...+.||++.++ .|+ .|| |.|+|-+ |..+||-+.+.|
T Consensus 60 ~~~~~~g~~~~~--tf~--------------~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 60 DYLNSKGETVVR--KLS--------------TPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEECSTTCEEEE--ECC--------------SCEEEEEECTT--TGGGTCEEEEEE
T ss_pred ccccCCCCEEEE--EcC--------------CCEEEEEEchh--hccCCCEEEEEE
Confidence 467899998887 565 567 9999986 999999998877
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=89.99 E-value=0.16 Score=43.83 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=29.4
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+.||++.++ .|+ .|| |.|||- .|..+||.+.+.|-
T Consensus 58 ~~~pg~t~s~--TF~--------------~~G~y~Y~C~--~H~~~GM~G~I~V~ 94 (124)
T 3ef4_A 58 KGGFSKEVVF--NAE--------------KEGLYVLKCA--PHYGMGMVVLVQVG 94 (124)
T ss_dssp BCCTTCCEEE--ECC--------------SSEEEEEECT--TTGGGTCEEEEEES
T ss_pred ccCCCCEEEE--EeC--------------CCeEEEEEcC--CCCcCCCEEEEEEC
Confidence 3568888776 666 568 999996 89999999999874
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=89.85 E-value=0.24 Score=53.97 Aligned_cols=39 Identities=23% Similarity=0.375 Sum_probs=32.3
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecc---ccccccCcccceEEc
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHI---LDHEDNIMMRPLKLI 550 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHi---L~HED~GMM~~~~V~ 550 (551)
+.+.||++.++.+.|+ .|| |.||||. ..|. ||.+.+.|.
T Consensus 549 ~~i~PG~t~t~~Fta~--------------~pGtY~yhC~e~Cg~~H~--gM~G~IiV~ 591 (595)
T 1fwx_A 549 MEIGPQMTSSVTFVAA--------------NPGVYWYYCQWFCHALHM--EMRGRMLVE 591 (595)
T ss_dssp EEECTTCEEEEEEECC--------------SCEEEEEECCSCCSTTCT--TCEEEEEEE
T ss_pred eeeCCCCeEEEEEECC--------------CCEEEEEECCCCCCCCcc--CCEEEEEEE
Confidence 6789999999988776 578 9999994 4675 999999885
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=89.84 E-value=0.23 Score=42.72 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=29.2
Q ss_pred eCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 498 ITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 498 v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+.||++.++ .|+ .|| |.|+|- .|...||.+.+.|-
T Consensus 58 ~~pg~t~s~--TF~--------------~pG~y~y~C~--~H~~~GM~G~I~V~ 93 (123)
T 3erx_A 58 SKINESYTL--TVT--------------EPGLYGVKCT--PHFGMGMVGLVQVG 93 (123)
T ss_dssp CCTTCCEEE--EEC--------------SCEEEEEECG--GGTTTTCEEEEEES
T ss_pred cCCCCEEEE--EeC--------------CCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 568887766 666 568 999999 89999999999874
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=88.83 E-value=0.21 Score=43.22 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=28.6
Q ss_pred eCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 498 ITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 498 v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+.||++.++ .|+ .|| |.|||- .|...||-+.+.|.
T Consensus 60 s~pGet~s~--TF~--------------~pG~y~y~C~--~H~~~GM~G~I~V~ 95 (127)
T 3tu6_A 60 GKINEEITV--TLS--------------KPGVYMYQCA--PHVGMGMIGAIVVG 95 (127)
T ss_dssp CCTTCCCEE--ECC--------------SCEEEEEECT--TTGGGTCEEEEEES
T ss_pred cCCCCEEEE--EeC--------------CCeEEEEEeC--CCCcCCcEEEEEEC
Confidence 468887665 666 568 999999 69999999999885
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=86.09 E-value=0.46 Score=39.41 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=26.5
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
-.+.||++.++ .|+ .|| |.|+|-+ |. ||-+.+.|
T Consensus 71 ~~l~~g~~~~~--tf~--------------~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 71 EMMTKDQAYAI--TFN--------------EAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp CCBCTTEEEEE--EEC--------------SCEEEEEECSS--CT--TCEEEEEE
T ss_pred cccCCCCEEEE--EeC--------------CCEEEEEEeCC--CC--CCEEEEEE
Confidence 35789998877 566 567 9999987 76 88888776
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=86.02 E-value=0.41 Score=41.09 Aligned_cols=36 Identities=25% Similarity=0.369 Sum_probs=28.9
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+.||++.++ .|+ .+| |.|+|- .|..+||-+.|.|.
T Consensus 57 ~~~pG~t~~~--tF~--------------~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1pmy_A 57 KTTVGQEAVV--KFD--------------KEGVYGFKCA--PHYMMGMVALVVVG 93 (123)
T ss_dssp BCCTTSCEEE--ECC--------------SCEEEEEECS--TTTTTTCEEEEEES
T ss_pred ecCCCCEEEE--EeC--------------CCeEEEEEeC--CccccCCEEEEEEc
Confidence 3568997665 666 567 999998 59999999999885
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=85.08 E-value=0.55 Score=40.27 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=28.2
Q ss_pred eCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 498 ITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 498 v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+.||++.++ .|+ .|| |.|+|- .|..+||-+.|.|.
T Consensus 58 ~~pG~t~~~--tF~--------------~~G~y~y~C~--~H~~~gM~G~I~V~ 93 (123)
T 1paz_A 58 SKINENYVL--TVT--------------QPGAYLVKCT--PHYAMGMIALIAVG 93 (123)
T ss_dssp CCTTCCEEE--ECC--------------SCEEEEEECT--TTGGGTCEEEEEES
T ss_pred cCCCCEEEE--EeC--------------CCEEEEEEeC--CcccCCCEEEEEEc
Confidence 468887665 666 567 999997 59999999999885
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=83.16 E-value=0.72 Score=39.96 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=26.9
Q ss_pred cEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 495 VYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 495 TV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+-.+.||++.++ .|+ .|| |-|||-+ |. ||-+.+.|
T Consensus 96 s~~l~pG~t~~~--tF~--------------~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 96 GEMMTKDQAYAI--TFN--------------EAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp CCCBCTTEEEEE--EEC--------------SCEEEEEECSS--CT--TCEEEEEE
T ss_pred ccccCCCCEEEE--EcC--------------CCEEEEEEeCC--Cc--CCEEEEEE
Confidence 335789998876 566 457 9999987 77 88888776
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=82.84 E-value=0.76 Score=41.64 Aligned_cols=46 Identities=17% Similarity=0.329 Sum_probs=35.2
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
..|..|.||++.+|.|.+... .|| |-|+|-+--|.. ||-+.|.|.+
T Consensus 121 ~~t~~l~pGet~svtf~~~~l------------kpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 121 AHTKLIGGGEESSLTLDPAKL------------ADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EECCCBCTTCEEEEEECGGGG------------TTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred ccceeeCCCCEEEEEEecCCC------------CCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 346678999999997765411 246 999999999988 8888888753
|
| >3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=82.11 E-value=6.6 Score=33.36 Aligned_cols=84 Identities=17% Similarity=0.103 Sum_probs=54.3
Q ss_pred ECCcccCceeec--C--eEEEEEEEecCCCceEEEEEcCCceEEEEEcC--CCCCC-------CceEecEEEEccCceEE
Q 008840 276 VNGKAWPRMTVR--R--RKYRFRIINASNARFFRFFFTNGLRFIHVGSD--SAYLG-------KPVVTNDTVLAPAEIAD 342 (551)
Q Consensus 276 VNG~~~P~~~v~--~--~~~RlRllNas~~~~~~l~l~~g~~~~via~D--G~~l~-------~P~~~~~l~l~pgeR~d 342 (551)
+||..-+.++.. + -...|.+.|.+.. ...|.+..|+.+.++-.| |..+= -........|.|||...
T Consensus 3 ~~~~l~~~v~~~~~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~ 81 (120)
T 3isy_A 3 ENQEVVLSIDAIQEPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYD 81 (120)
T ss_dssp -CCSEEEEEEEEECSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEE
T ss_pred cccEEEEEEeeccCCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEE
Confidence 355554444422 2 2788888999854 466777778775555544 54321 12245789999999999
Q ss_pred EEEEcCCC-CCceEEEecC
Q 008840 343 VVIDFSES-TSDVAILAND 360 (551)
Q Consensus 343 Vlv~~~~~-~g~~~~L~~~ 360 (551)
.-+..++. ..++|+|..-
T Consensus 82 f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 82 FSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp EEEEESSCCCSEEEEEEEE
T ss_pred EEEEeCCCCCCccEEEEEE
Confidence 99999853 3458888753
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 551 | ||||
| d1gska2 | 174 | b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba | 5e-37 | |
| d1gska1 | 181 | b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci | 4e-34 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 4e-31 | |
| d1gska3 | 154 | b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba | 7e-19 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 6e-10 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 1e-09 | |
| d2j5wa1 | 192 | b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie | 1e-09 | |
| d1kv7a1 | 140 | b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch | 4e-09 | |
| d1hfua1 | 131 | b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin | 4e-08 | |
| d1kv7a3 | 181 | b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc | 9e-08 | |
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 1e-07 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 2e-07 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 4e-07 | |
| d2bw4a1 | 157 | b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige | 8e-07 | |
| d1sdda1 | 180 | b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t | 1e-06 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 2e-06 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 7e-05 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 9e-05 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 1e-04 | |
| d2j5wa4 | 179 | b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap | 1e-04 | |
| d2j5wa3 | 207 | b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap | 2e-04 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 0.001 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 0.002 | |
| d2j5wa5 | 149 | b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa | 0.004 |
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 132 bits (334), Expect = 5e-37
Identities = 69/177 (38%), Positives = 97/177 (54%), Gaps = 8/177 (4%)
Query: 226 RLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPS---IHPQWQPEYFGDVIVVNGKAWP 282
+LPS + +D PL + DR +GS++ S NPS +P P + G+ I+VNGK WP
Sbjct: 1 KLPSDE-YDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP 59
Query: 283 RMTVRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIAD 342
+ V RKYRFR+INASN R + NG FI +GSD L + V N LAPAE D
Sbjct: 60 YLEVEPRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYD 119
Query: 343 VVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKN-RETDPWRVPEKL 398
++IDF+ + ILAN A G+ + + +M+F + K + D R P+ L
Sbjct: 120 IIIDFTAYEGESIILANSAG---CGGDVNPETDANIMQFRVTKPLAQKDESRKPKYL 173
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 125 bits (314), Expect = 4e-34
Identities = 80/187 (42%), Positives = 106/187 (56%), Gaps = 9/187 (4%)
Query: 38 LEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTAS 97
LE FVD LP +K + E+ M E + HRDLPPT ++ +
Sbjct: 2 LEKFVDALPIPDTLKPVQQSKEKTY---YEVTMEECTHQLHRDLPPTRLWGYN-----GL 53
Query: 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKG-VPTVVHLHGGIDEPE 156
PGPTIE + YV W N+LP H LPID TI + +++ V TVVHLHGG+ +
Sbjct: 54 FPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDD 113
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYIL 216
SDGY ++WF+ FE+ GP + E YHY N Q+ WYHDH M LTR+N+ AGL+GAYI+
Sbjct: 114 SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYII 173
Query: 217 RHPDVEA 223
P +
Sbjct: 174 HDPKEKR 180
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 116 bits (292), Expect = 4e-31
Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 11/173 (6%)
Query: 227 LPSG-DVFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMT 285
LP + D P+ V D+ F +G I +FGD ++ NG +P+
Sbjct: 2 LPKQWGIDDVPVIVQDKKFSADGQIDYQLD------VMTAAVGWFGDTLLTNGAIYPQHA 55
Query: 286 VRRRKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVI 345
R R R++N NAR F ++ + SD L +PV ++ + E +V++
Sbjct: 56 APRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLV 115
Query: 346 DFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILKNRETDPWRVPEKL 398
+ +++ + + D VM+ + + +P+ L
Sbjct: 116 EVNDNKPFDLVTLPVSQMGMAIAP--FDKPHPVMRIQPI--AISASGALPDTL 164
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 81.6 bits (201), Expect = 7e-19
Identities = 46/164 (28%), Positives = 62/164 (37%), Gaps = 30/164 (18%)
Query: 401 YPSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPVTETPK--TLDQTELVNLEE 458
YPS R + + G+P LL+N K DPVTETPK T + ++N
Sbjct: 2 YPSVQHERIQNIRTLKLAGTQDEYGRPV-LLLNNKRWHDPVTETPKVGTTEIWSIINPTR 60
Query: 459 FKACM-------------NKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTR 505
+ + + G P E+GWK+ + G V R
Sbjct: 61 GTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLR 120
Query: 506 ILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLK 548
I F G YV+HCHIL+HED MMRP+
Sbjct: 121 IAATF-------------GPYSGRYVWHCHILEHEDYDMMRPMD 151
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 55.0 bits (132), Expect = 6e-10
Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 23/123 (18%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
P P I G + + L + +L T +H HG
Sbjct: 30 VFPSPLITGKKGDRFQLNVVDTLTNHTML----------------KSTSIHWHGFFQAGT 73
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYIL 216
+ ++ G ++ Y +H Q G WYH H GL G +++
Sbjct: 74 NWADGPAFVNQCPIASGHSFL---YDFHVPDQAGTFWYHSHLST----QYCDGLRGPFVV 126
Query: 217 RHP 219
P
Sbjct: 127 YDP 129
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 54.6 bits (131), Expect = 1e-09
Identities = 19/124 (15%), Positives = 36/124 (29%), Gaps = 23/124 (18%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
+ P I + + L ++ T +H HG
Sbjct: 30 TTIAPLITGNIDDRFQINVIDQLTDANMR----------------RATSIHWHGFFQAGT 73
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYIL 216
++ ++ ++ Y + Q G WYH H GL GA+++
Sbjct: 74 TEMDGPAFVNQCPIIPNESFV---YDFVVPGQAGTYWYHSHLSTQYC----DGLRGAFVV 126
Query: 217 RHPD 220
P+
Sbjct: 127 YDPN 130
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (133), Expect = 1e-09
Identities = 23/122 (18%), Positives = 31/122 (25%), Gaps = 11/122 (9%)
Query: 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESD 158
GP I+A G YV +N + P D+
Sbjct: 74 LGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEH-EGAIYPDNTTDFQRADDKVYP 132
Query: 159 GYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218
G +T T E YH H + +GLIG I+
Sbjct: 133 G---EQYTYML-----LATEEQSPGEGDGNCVTRIYHSHIDAPKDIA--SGLIGPLIICK 182
Query: 219 PD 220
D
Sbjct: 183 KD 184
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 52.8 bits (126), Expect = 4e-09
Identities = 22/138 (15%), Positives = 37/138 (26%), Gaps = 34/138 (24%)
Query: 83 PTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGV 142
+ + ++ GP ++ G V N L
Sbjct: 33 TATTWGYN-----GNLLGPAVKLQRGKAVTVDIYNQLTEETT------------------ 69
Query: 143 PTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLT 202
+H HG E DG + G + + Q W+H H G T
Sbjct: 70 ---LHWHGLEVPGEVDGGPQGIIPPGGKRS--------VTLNVDQPAATCWFHPHQHGKT 118
Query: 203 RVNLLAGLIGAYILRHPD 220
+ GL G ++ +
Sbjct: 119 GRQVAMGLAGLVVIEDDE 136
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 50.0 bits (119), Expect = 4e-08
Identities = 22/123 (17%), Positives = 32/123 (26%), Gaps = 23/123 (18%)
Query: 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPES 157
V GP I + + N L +L PT +H HG +
Sbjct: 31 VHGPLIRGGKNDNFELNVVNDLDNPTML----------------RPTSIHWHGLFQRGTN 74
Query: 158 DGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217
G + Y + G WYH H GL G ++
Sbjct: 75 WADGADGVNQCPISPGHAFL---YKFTPAGHAGTFWYHSHFGT----QYCDGLRGPMVIY 127
Query: 218 HPD 220
+
Sbjct: 128 DDN 130
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 50.1 bits (119), Expect = 9e-08
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 479 CGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPGYVYHCHILDH 538
+ H GWK+ G V+ +LV+F DA E Y+ HCH+L+H
Sbjct: 121 SENGKPPAAHRAGWKDTV-KVEGNVSEVLVKF---------NHDAPKEHAYMAHCHLLEH 170
Query: 539 EDNIMMRP 546
ED MM
Sbjct: 171 EDTGMMLG 178
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 50.6 bits (120), Expect = 1e-07
Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 15/147 (10%)
Query: 218 HPDVEAPLRLPSGDVFDRPLFVFDRNFLTNG--------SIYMNSTG--NNPSIHPQWQP 267
H D E L L D + + + + + +I +N G +
Sbjct: 3 HYDGEINLLL--SDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSN 60
Query: 268 EYFGDVIVVNGKAWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGK 326
+ A V + YR RI + + F + + V +D Y+ +
Sbjct: 61 LEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAAL-NFAIGNHQLLVVEADGNYV-Q 118
Query: 327 PVVTNDTVLAPAEIADVVIDFSESTSD 353
P T+D + E V+I ++ S+
Sbjct: 119 PFYTSDIDIYSGESYSVLITTDQNPSE 145
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 48.9 bits (116), Expect = 2e-07
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 12/113 (10%)
Query: 267 PEYFGDVIVVNGKA---------WPRMTVRRRK-YRFRIINASNARFFRFFFTNGLRFIH 316
F D +++NG A + +T+ K +R RI+N S F+
Sbjct: 29 APPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSL-VNHTMTV 87
Query: 317 VGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGN 369
+ +D + + + LA + DVVID S + + G+
Sbjct: 88 IAADMVPV-NAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGS 139
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 47.8 bits (113), Expect = 4e-07
Identities = 22/124 (17%), Positives = 36/124 (29%), Gaps = 27/124 (21%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
++ GP I A G VT N+L N I H
Sbjct: 63 NIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGI---------------HQKDTNLHDG 107
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYIL 216
++G + ++ + +Q G +WYH H G++G +
Sbjct: 108 ANGVTECPIPPKGGQR--------TYRWRARQYGTSWYHSHFSA----QYGNGVVGTIQI 155
Query: 217 RHPD 220
P
Sbjct: 156 NGPA 159
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 46.6 bits (110), Expect = 8e-07
Identities = 26/186 (13%), Positives = 45/186 (24%), Gaps = 38/186 (20%)
Query: 37 KLEMFVDELPDMPKIKGY-YAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLT 95
L +L P + + A + + + + EKK R+ F
Sbjct: 4 TLPRVKVDLVKPPFVHAHDQVAKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFN----- 58
Query: 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP 155
SVPGP + + N + H
Sbjct: 59 GSVPGPLMVVHENDYVELRLINPDTNTL-------------------LHNIDFHAATGAL 99
Query: 156 ESDGYAKSWFTAGFEEKGPTWTNETYHYH-NMQQPGNTWYHDHTMGLTRVNLLAGLIGAY 214
E +PG YH G+ ++ +G+ GA
Sbjct: 100 GGGAL------------TQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAI 147
Query: 215 ILRHPD 220
++ D
Sbjct: 148 MVLPRD 153
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.6 bits (110), Expect = 1e-06
Identities = 16/122 (13%), Positives = 36/122 (29%), Gaps = 11/122 (9%)
Query: 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESD 158
GPT+ A G V ++N + S + +++ +
Sbjct: 58 LGPTLYAEVGDIMKVHFKNKAHKPLSI----HAQGIKYSKFSEGASYSDHTLPMEKMDDA 113
Query: 159 GYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218
+T + + + H+ Y+ + + N +GLIG ++
Sbjct: 114 VAPGQEYTYEW-----IISEHSGPTHDDPPCLTHIYYSYVNLVEDFN--SGLIGPLLICK 166
Query: 219 PD 220
Sbjct: 167 KG 168
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 45.9 bits (108), Expect = 2e-06
Identities = 31/185 (16%), Positives = 49/185 (26%), Gaps = 36/185 (19%)
Query: 37 KLEMFVDELPDMPKIKGY-YAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLT 95
KL L P++ + A K + + + EKK F
Sbjct: 5 KLPHTKVTLVAPPQVHPHEQATKSGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFN----- 59
Query: 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP 155
S+PGPT+ G +T N P V HG
Sbjct: 60 GSMPGPTLVVHEGDYVQLTLVNPATNAM-------------------PHNVEFHGATGAL 100
Query: 156 ESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYI 215
G T + G YH G+ ++++G+ G +
Sbjct: 101 G-------GAKLTNVNPGEQATLRF----KADRSGTFVYHCAPEGMVPWHVVSGMSGTLM 149
Query: 216 LRHPD 220
+ D
Sbjct: 150 VLPRD 154
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 40.4 bits (94), Expect = 7e-05
Identities = 30/151 (19%), Positives = 43/151 (28%), Gaps = 34/151 (22%)
Query: 71 FEKKWKFH-RDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDP 129
+E ++ F + V PGPTI A G V N L
Sbjct: 8 WEVEYMFWAPNCNENIVMGIN-----GQFPGPTIRANAGDSVVVELTNKLHTE------- 55
Query: 130 TIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQP 189
V+H HG + + + G T+ + P
Sbjct: 56 -------------GVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNF----TVDNP 98
Query: 190 GNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220
G +YH H AGL G+ I+ P
Sbjct: 99 GTFFYHGHLGM----QRSAGLYGSLIVDPPQ 125
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 40.4 bits (94), Expect = 9e-05
Identities = 23/124 (18%), Positives = 33/124 (26%), Gaps = 31/124 (25%)
Query: 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
VPG I G V + N+ H
Sbjct: 54 DVPGRMIRVREGDTVEVEFSNNPSSTVP----------------------HNVDFHAATG 91
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYIL 216
G A + FTA G T T QPG YH +++ G+ G ++
Sbjct: 92 QGGGAAATFTAP----GRTSTFSFK----ALQPGLYIYHCAVAP-VGMHIANGMYGLILV 142
Query: 217 RHPD 220
+
Sbjct: 143 EPKE 146
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 40.4 bits (94), Expect = 1e-04
Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 5/147 (3%)
Query: 231 DVFDRPLFVF--DRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRR 288
DV D + D + ++ N P+ + + ++V+
Sbjct: 2 DVDDASTVITIADWYHSLSTVLFPNPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQS 61
Query: 289 RK-YRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDF 347
K YRFRI++ S + F +G R + D +P+ + + + VV++
Sbjct: 62 GKRYRFRIVSTSCFPNYAFSI-DGHRMTVIEVDGVSH-QPLTVDSLTIFAGQRYSVVVEA 119
Query: 348 SESTSDVAILANDAPYPYPAGNPVNDA 374
+++ + I AN + +N A
Sbjct: 120 NQAVGNYWIRANPSNGRNGFTGGINSA 146
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (95), Expect = 1e-04
Identities = 17/122 (13%), Positives = 31/122 (25%), Gaps = 30/122 (24%)
Query: 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPES 157
+ GP + A G + ++N P +H HG E +
Sbjct: 83 ILGPQLHADVGDKVKIIFKNMAT---------------------RPYSIHAHGVQTESST 121
Query: 158 DG--YAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYI 215
T + + Y+ + + +GLIG I
Sbjct: 122 VTPTLPGETLTYVW-----KIPERSGAGTEDSACIPWAYYSTVDQVKDLY--SGLIGPLI 174
Query: 216 LR 217
+
Sbjct: 175 VC 176
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (95), Expect = 2e-04
Identities = 21/126 (16%), Positives = 29/126 (23%), Gaps = 13/126 (10%)
Query: 98 VPGPTIEALHGIDTYVTWQNHLPPNH-ILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE 156
+ GP I A G VT+ N I PI + +
Sbjct: 83 ILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNN--------EGTYYSPNYNPQS 134
Query: 157 SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNT--WYHDHTMGLTRVNLLAGLIGAY 214
+ A E WT P Y+ + GLIG
Sbjct: 135 RSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIF--TGLIGPM 192
Query: 215 ILRHPD 220
+
Sbjct: 193 KICKKG 198
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 37.8 bits (87), Expect = 0.001
Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 3/109 (2%)
Query: 269 YFGDVIVVNGKAWPRMTVRRRK-YRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKP 327
G + + V + K YR R+I+ S + F +G + D +P
Sbjct: 41 GKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNW-QFSIDGHELTIIEVDGELT-EP 98
Query: 328 VVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANG 376
+ + + V+D ++ + I A +
Sbjct: 99 HTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVN 147
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 36.6 bits (84), Expect = 0.002
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Query: 277 NGKAWPRMTVRRRK-YRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVL 335
A + V+ K YRFR+++ S + F +G + D +P++ + +
Sbjct: 51 PTAALAVINVQHGKRYRFRLVSISCDPNYTFSI-DGHNLTVIEVDGINS-QPLLVDSIQI 108
Query: 336 APAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDA 374
A+ V++ +++ + I AN +N A
Sbjct: 109 FAAQRYSFVLNANQTVGNYWIRANPNFGTVGFAGGINSA 147
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.9 bits (82), Expect = 0.004
Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 15/67 (22%)
Query: 485 VPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIM 543
+V+ I PG + + PG ++ HCH+ DH M
Sbjct: 95 YKHRGVYSSDVFDIFPGTYQTLEMFPRT--------------PGIWLLHCHVTDHIHAGM 140
Query: 544 MRPLKLI 550
++
Sbjct: 141 ETTYTVL 147
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 551 | |||
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 100.0 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 100.0 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.98 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.96 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.96 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.96 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.96 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.96 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.96 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.96 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.95 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.94 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.94 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.86 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.86 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.86 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.86 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.85 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.85 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.84 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.82 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.82 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.8 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.79 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.76 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.75 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.71 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.71 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.7 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.63 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.57 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.56 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.51 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.51 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.49 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.44 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.43 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.4 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.4 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.37 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 99.31 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 99.25 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.18 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.15 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.05 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.85 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 98.78 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 98.75 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.64 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.61 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.48 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.4 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 98.33 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 98.26 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 98.24 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 98.22 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 98.15 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.11 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.08 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.07 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 98.02 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.01 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.99 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 97.97 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 97.94 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 97.88 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 97.85 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 97.84 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 97.83 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 97.82 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 97.76 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 97.76 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 97.7 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 97.69 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 97.64 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 97.61 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 97.55 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 97.54 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 97.51 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 97.47 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 97.42 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 97.4 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 97.2 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 97.15 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 97.05 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 97.05 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 96.96 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 96.95 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 96.94 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 96.67 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 96.59 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 96.36 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 96.36 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 96.2 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 96.19 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 96.12 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 96.1 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 95.19 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 94.86 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 94.59 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 94.13 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 93.96 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 93.55 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 93.11 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 92.72 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 91.86 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 90.72 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 89.92 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 89.55 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 89.54 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 88.92 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 88.65 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 86.84 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 86.71 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 84.12 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 84.1 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 83.77 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 83.64 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 83.48 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 82.44 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 82.37 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 82.36 |
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=2.9e-41 Score=316.40 Aligned_cols=176 Identities=45% Similarity=0.837 Sum_probs=154.4
Q ss_pred CCccccccCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEE
Q 008840 37 KLEMFVDELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQ 116 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~ 116 (551)
+|+||+++||+||.+++.....+. ..++|.+.+.+++++++++.+.+|+|| |++|||||||++||+|+|+|+
T Consensus 1 ~l~~f~~~lpipp~~~p~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~yn-----G~~PGPtI~v~~Gd~v~v~~~ 72 (181)
T d1gska1 1 TLEKFVDALPIPDTLKPVQQSKEK---TYYEVTMEECTHQLHRDLPPTRLWGYN-----GLFPGPTIEVKRNENVYVKWM 72 (181)
T ss_dssp CCCSSCSBCCCCCBCCCSEECSSC---EEEEEEEEEEEECSSTTSCCEEEEEET-----TBSSCCBEEEETTCCEEEEEE
T ss_pred CCccccCCCCCCCcCCCcccCCCc---eEEEEEEEEeEEEecCCCcceeEEEEC-----CccCCCeEEEeCCeEEEEEEE
Confidence 589999999999999875555553 568888999999999998889999998 999999999999999999999
Q ss_pred eCCCCCCCCCCCCCCCCCCCC-CCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEe
Q 008840 117 NHLPPNHILPIDPTIPTAMPS-NKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYH 195 (551)
Q Consensus 117 N~L~~~~~~~~~~~~~~~~~~-~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH 195 (551)
|+|++.++.+++.+.+...+. ....++|++||||+++++.+||.+.++++++.+.++..+..++|+|++++++||||||
T Consensus 73 N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Gt~WYH 152 (181)
T d1gska1 73 NNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYH 152 (181)
T ss_dssp ECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCCCGGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCSEEEEEE
T ss_pred eCCCcCccccccccccccccccccCCCcceeeeeccccCCccCCCcccccccCcccCCCCCcceeEEeecCCCCEEEEeC
Confidence 999999888888888776543 3456789999999999999999999999998888887766669999999899999999
Q ss_pred ccCCCchhhhhhccceEEEEEeCCC
Q 008840 196 DHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 196 ~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
||.+++++.|+++||+|+|||+|++
T Consensus 153 ~H~~g~t~~qv~~GL~G~~iV~d~~ 177 (181)
T d1gska1 153 DHAMALTRLNVYAGLVGAYIIHDPK 177 (181)
T ss_dssp ECCTTTHHHHHHHTCEEEEEEECGG
T ss_pred CCCCCCcHHHHhcCCEEEEEECCcc
Confidence 9999999999999999999999876
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.7e-34 Score=254.99 Aligned_cols=134 Identities=20% Similarity=0.342 Sum_probs=116.6
Q ss_pred cCCCCccccceeccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCC
Q 008840 44 ELPDMPKIKGYYAANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNH 123 (551)
Q Consensus 44 ~lp~pp~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~ 123 (551)
.||+|+.+++ ++. ..++|.+.+.++++ .+. .+.+|+|| |++|||+||+++||+|+|+|.|+|++
T Consensus 3 ~~p~P~~~~~----~~~---~~~~l~~~~~~~~~-~G~-~~~~~~~N-----G~~PGP~i~~~~Gd~v~v~~~N~l~~-- 66 (140)
T d1kv7a1 3 TLPIPDLLTT----DAR---NRIQLTIGAGQSTF-GGK-TATTWGYN-----GNLLGPAVKLQRGKAVTVDIYNQLTE-- 66 (140)
T ss_dssp BCCCCCEECC----CTT---SEEEEEEEEEEEEE-TTE-EEEEEEES-----SSSBCCEEEEETTCEEEEEEEECSSS--
T ss_pred CCCCCCcccC----CCc---eEEEEEEEEEEEec-CCE-EEEEEEEC-----CccCCceEEEECCCEEEEEEEeCccc--
Confidence 4677888753 222 35677777888888 344 68899998 99999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchh
Q 008840 124 ILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTR 203 (551)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~ 203 (551)
++++||||+++++.+||++. +.|.||+++ +|.|++++++||||||||.++.+.
T Consensus 67 -------------------~~siH~HG~~~~~~~dG~~~-----~~i~pg~~~---~y~~~~~~~aGt~wyH~H~~~~~~ 119 (140)
T d1kv7a1 67 -------------------ETTLHWHGLEVPGEVDGGPQ-----GIIPPGGKR---SVTLNVDQPAATCWFHPHQHGKTG 119 (140)
T ss_dssp -------------------CBCCEEETCCCCGGGSCCTT-----CCBCTTCEE---EEEEECCSCSEEEEEECCCTTTHH
T ss_pred -------------------cccEeeeeeecCCccCCCcc-----ceEccCCce---eEEEEEecCCeeEEEEECCCCChH
Confidence 89999999999999999875 358899999 999999888999999999999999
Q ss_pred hhhhccceEEEEEeCCC
Q 008840 204 VNLLAGLIGAYILRHPD 220 (551)
Q Consensus 204 ~qv~~GL~G~~iV~dp~ 220 (551)
.|+++||+|+|||+|++
T Consensus 120 ~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 120 RQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp HHHHTTCCEEEEEECHH
T ss_pred HHHhCCCeEEEEECCcc
Confidence 99999999999999765
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.98 E-value=7.2e-32 Score=249.88 Aligned_cols=169 Identities=41% Similarity=0.701 Sum_probs=141.1
Q ss_pred CCCCCCcCceeEEEEEeeecCCCceEecCCCCCCC---CCCCCCCccCCceEEECCcccCceeecCeEEEEEEEecCCCc
Q 008840 226 RLPSGDVFDRPLFVFDRNFLTNGSIYMNSTGNNPS---IHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNAR 302 (551)
Q Consensus 226 ~lP~~~~~e~~lvl~d~~~~~~g~~~~~~~g~~~~---~~~~~~~~~~gd~~lVNG~~~P~~~v~~~~~RlRllNas~~~ 302 (551)
.||++ ++|++|+||||.|+.+|++.+...+..+. ....+..++.||.++|||+.+|+++|++++|||||||+|+++
T Consensus 1 ~LP~g-d~Diplvl~D~~~~~dg~l~~~~~~~~~~~~~~~~~~~~g~~Gd~~lvNG~~~p~~~v~~~~~RlRliNa~~~~ 79 (174)
T d1gska2 1 KLPSD-EYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEPRKYRFRVINASNTR 79 (174)
T ss_dssp CCCCG-GGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESCEEECCSSEEEEEEEECCSSC
T ss_pred CcCCC-CCCEEEEeEecccCCCCCEEeeccccCCCcCCcccccccCccCCeEEecCccceEEEecCceEEEEEEecccCc
Confidence 37887 99999999999999999998765433221 234566788999999999999999999999999999999999
Q ss_pred eEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEE
Q 008840 303 FFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFI 382 (551)
Q Consensus 303 ~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~ 382 (551)
.+.|++++|++|+|||+||+++++|+.++.|.|+|||||||+|++++.+|.++.|++.... .+......+..||+|+
T Consensus 80 ~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~---~~~~~~~~~~~vl~~~ 156 (174)
T d1gska2 80 TYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGC---GGDVNPETDANIMQFR 156 (174)
T ss_dssp CEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCS---SSCCCTTTTTEEEEEE
T ss_pred eeeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEECCCCCCceEEEEccCCC---CCccCCCCCcceEEEE
Confidence 9999997789999999999999889999999999999999999999988889999886532 1222223567899999
Q ss_pred EccCC-CCCCCCCCCCC
Q 008840 383 ILKNR-ETDPWRVPEKL 398 (551)
Q Consensus 383 v~~~~-~~~~~~lP~~L 398 (551)
|.+.. ..+++.+|+.|
T Consensus 157 v~~~~~~~d~s~lP~~L 173 (174)
T d1gska2 157 VTKPLAQKDESRKPKYL 173 (174)
T ss_dssp CCSCCSSCCCCCCCSBC
T ss_pred ecCCCCCCCCCCCchhh
Confidence 97654 33566788876
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=4.7e-32 Score=240.40 Aligned_cols=125 Identities=19% Similarity=0.284 Sum_probs=104.5
Q ss_pred eeEEEEEEEEEEeecCCC-CCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDL-PPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGV 142 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~-~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~ 142 (551)
+++++.+.+.. +.++. ....+|+|| |++|||+||+++||+|+|+|+|+|++. ....
T Consensus 3 v~~~l~~~~~~--~~pdG~~~~~~~~~n-----G~~PGP~i~~~~GD~v~v~~~N~l~~~----------------~~~~ 59 (136)
T d1v10a1 3 VALDLHILNAN--LDPDGTGARSAVTAE-----GTTIAPLITGNIDDRFQINVIDQLTDA----------------NMRR 59 (136)
T ss_dssp SEEEEEEEEEE--ECTTSSCCEEEEEES-----SSSSCCCEEEETTCEEEEEEEECCCCT----------------TSCC
T ss_pred EEEEEEEEEEE--ECCCCcceeEEEEEC-----CCccCCeEEEECCcEEEEEEEeCCCCc----------------ccCc
Confidence 35566555554 44443 356789998 999999999999999999999999862 1123
Q ss_pred CeEEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 143 PTVVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 143 ~t~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|||||||+++.+. +||+++ +++|+|.||++| +|+|++.+++||||||||.++ |+++||+|+|||+|++
T Consensus 60 ~tsiH~HGl~~~~~~~~dgv~~--~t~~~I~PG~~~---~Y~~~~~~~~Gt~wYH~H~~~----q~~~GL~G~liV~~~~ 130 (136)
T d1v10a1 60 ATSIHWHGFFQAGTTEMDGPAF--VNQCPIIPNESF---VYDFVVPGQAGTYWYHSHLST----QYCDGLRGAFVVYDPN 130 (136)
T ss_dssp CBCEEEETCCCTTCGGGSCCBT--TTBCCBCTTEEE---EEEEECTTCCEEEEEEECSTT----GGGGTCEEEEEEECTT
T ss_pred ceeEEecccccccccccCCCCc--cccceECCCCeE---EEEEECCCCccceEEecCchh----HHhCCCEEEEEECCCc
Confidence 89999999998765 889888 789999999999 999999878999999999853 8899999999999876
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.96 E-value=6.1e-30 Score=225.41 Aligned_cols=123 Identities=21% Similarity=0.313 Sum_probs=102.1
Q ss_pred EEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeE
Q 008840 66 LEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTV 145 (551)
Q Consensus 66 ~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~ 145 (551)
+++.+.++++ .++.-.+.+|+|| |++|||+||+++||+|+|+++|+++.. ....+++
T Consensus 6 ~~l~v~~~~i--~p~G~~~~~~~~n-----g~~PGPtI~~~~GD~v~v~~~N~~~~~----------------~~~~~~~ 62 (130)
T d1gyca1 6 ASLVVANAPV--SPDGFLRDAIVVN-----GVFPSPLITGKKGDRFQLNVVDTLTNH----------------TMLKSTS 62 (130)
T ss_dssp EEEEEEEEEE--CTTSCCEEEEEET-----TBSSCCCEEEETTCEEEEEEEECCCCG----------------GGCSCBC
T ss_pred EEEEEEEEEE--CCCCEEEEEEEEC-----CcccCCeEEEECCeEEEEEEEecCCCc----------------ccCCcee
Confidence 3444555544 4444478899998 999999999999999999999998852 0113799
Q ss_pred EeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 146 VHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 146 iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+||||+++++. +||++. +++++|.||++| +|+|++.+++||||||||.. .|+++||+|+|||+||+
T Consensus 63 iH~HG~~~~~~~~~d~~~~--~s~~~i~PG~s~---~Y~~~~~~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~p~ 130 (130)
T d1gyca1 63 IHWHGFFQAGTNWADGPAF--VNQCPIASGHSF---LYDFHVPDQAGTFWYHSHLS----TQYCDGLRGPFVVYDPK 130 (130)
T ss_dssp EEEETCCCTTCGGGSCCBT--TTBCCBCTTEEE---EEEEECSSCCEEEEEEECST----TGGGGTCEEEEEEECTT
T ss_pred EEeccccccccCCCCCccc--cccCCCCCCCeE---EEEEECCCCCceeEEecCCH----HHHhCCCEEEEEEeCCC
Confidence 99999998876 778777 678899999999 99999877899999999963 58999999999999875
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.96 E-value=9.8e-30 Score=231.63 Aligned_cols=147 Identities=20% Similarity=0.219 Sum_probs=117.7
Q ss_pred CCCccccccCCCCcccccee--ccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEE
Q 008840 36 LKLEMFVDELPDMPKIKGYY--AANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYV 113 (551)
Q Consensus 36 ~~~~~~~~~lp~pp~~~~~~--~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v 113 (551)
..++++..+|..||.+.+.. ..++ .+..++++++.+++.++..+.-.+.+|+|| |++|||+|||++||+|+|
T Consensus 3 ~~~p~~~~~l~~pp~~~~~~~~~~~~-~~~~~~~l~~~~~~~~i~~~G~~~~~~~~N-----G~~PGP~I~v~~GD~V~i 76 (157)
T d2bw4a1 3 STLPRVKVDLVKPPFVHAHDQVAKTG-PRVVEFTMTIEEKKLVIDREGTEIHAMTFN-----GSVPGPLMVVHENDYVEL 76 (157)
T ss_dssp GGSCEEECCCCCTTSCCCCCSBCSSS-CCEEEEEEEEEEEEEECSTTCCEEEEEEET-----TBSSCCEEEEETTCEEEE
T ss_pred ccccceeeeccCCCCCCccccccCCC-CeEEEEEEEEEEEEEEECCCCeEEEEEEEC-----CccCCceEEEECCcEEEE
Confidence 34667778888888654321 1223 222578888888888886554467889998 999999999999999999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeE
Q 008840 114 TWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTW 193 (551)
Q Consensus 114 ~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~w 193 (551)
+|+|+ .+++||||++....+||.++..++ .|.||+++ +|+|+++ ++||||
T Consensus 77 ~l~N~------------------------~~~~~~Hg~~~h~~~~~~~~~~~~--~i~PGet~---ty~f~a~-~pGt~~ 126 (157)
T d2bw4a1 77 RLINP------------------------DTNTLLHNIDFHAATGALGGGALT--QVNPGEET---TLRFKAT-KPGVFV 126 (157)
T ss_dssp EEEEC------------------------TTCCSCBCCEETTSCSGGGGGGGC--CBCTTEEE---EEEEECC-SCEEEE
T ss_pred EEEeC------------------------CCCcceEeeeecccCCCcCCccee--eECcCCEE---eEEEECC-CCccce
Confidence 99996 356678888777777777765454 49999999 9999996 899999
Q ss_pred EeccCCCchhhhhhccceEEEEEeC
Q 008840 194 YHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 194 YH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
||||.++.+..|+++||+|+|||++
T Consensus 127 YH~H~~~~~~~h~~~Gl~G~~iV~p 151 (157)
T d2bw4a1 127 YHCAPEGMVPWHVTSGMNGAIMVLP 151 (157)
T ss_dssp EECCCTTCHHHHHHTTCEEEEEEEC
T ss_pred EEECCCCchHHHHhCCCEEEEEEeC
Confidence 9999999999999999999999983
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.96 E-value=2.7e-29 Score=229.07 Aligned_cols=149 Identities=20% Similarity=0.267 Sum_probs=117.2
Q ss_pred CCCCccccccCCCCcccccee--ccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEE
Q 008840 35 PLKLEMFVDELPDMPKIKGYY--AANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTY 112 (551)
Q Consensus 35 ~~~~~~~~~~lp~pp~~~~~~--~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~ 112 (551)
...++++..+|..||...+.. ..+|.. ..++++++.+..+.+......+.+|+|| |++||||||+++||+|+
T Consensus 3 ~~~~p~~~~~l~~pp~~~~~~~~~~~g~~-~~~~~lt~~~~~~~~~~~g~~~~~~t~N-----G~~PGPtI~v~~Gd~v~ 76 (159)
T d1oe2a1 3 ADKLPHTKVTLVAPPQVHPHEQATKSGPK-VVEFTMTIEEKKMVIDDKGTTLQAMTFN-----GSMPGPTLVVHEGDYVQ 76 (159)
T ss_dssp GGGSCEEECCCCCTTSCCCCCSSCCCCCC-EEEEEEEEEEEEEECSTTCCEEEEEEET-----TBSSCCCEEEETTCEEE
T ss_pred hHHCCcccccccCCCCCCccccccCCCCe-EEEEEEEEEEEEEEECCCCcEEEEEEEC-----CcCCCCeEEEECCcEEE
Confidence 345777777887777765432 223432 2578888889988886544467889998 99999999999999999
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCcee
Q 008840 113 VTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNT 192 (551)
Q Consensus 113 v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~ 192 (551)
|+|+|+++..| ++++|+||.. ++.++. +++.|.||+++ +|+|+++ ++|||
T Consensus 77 v~~~N~~~~~h-------------------~h~ih~hg~~-----~~~~g~--~~~~I~PG~t~---ty~f~a~-~~Gt~ 126 (159)
T d1oe2a1 77 LTLVNPATNAM-------------------PHNVEFHGAT-----GALGGA--KLTNVNPGEQA---TLRFKAD-RSGTF 126 (159)
T ss_dssp EEEEECTTCCS-------------------CBCCEETTSC-----SGGGGG--GGCCBCTTEEE---EEEEECC-SCEEE
T ss_pred EEEECCCcccc-------------------ccceeecccc-----CCCCCc--ccccCCCCCeE---EEEEEcC-CCceE
Confidence 99999987522 5778888754 444443 33469999999 9999996 89999
Q ss_pred EEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 193 WYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 193 wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
|||||.++.+..|+++||+|+|||+ |+
T Consensus 127 ~yH~H~~~~~~~q~~~Gl~G~liV~-p~ 153 (159)
T d1oe2a1 127 VYHCAPEGMVPWHVVSGMSGTLMVL-PR 153 (159)
T ss_dssp EEECCCTTCHHHHHHTTCEEEEEEE-CT
T ss_pred EEEeCCCCCchhHHhCCCEEEEEEE-CC
Confidence 9999999999999999999999998 44
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=2.3e-29 Score=228.65 Aligned_cols=134 Identities=33% Similarity=0.544 Sum_probs=110.8
Q ss_pred CCCCCccCceeeEEeeeecccCCCCcceEEEcccccCCCCCCCcce--eeeEEEEeeeeeeeeeccccCceeeeeeeec-
Q 008840 402 PSADLSAASTTRYIAMYEYTSNTGKPTHLLINAKTLEDPVTETPKT--LDQTELVNLEEFKACMNKINDAIKCNLSKHA- 478 (551)
Q Consensus 402 ~~~~~~~~~~~r~~~l~~~~~~~g~~~~~~INg~~f~~~~~~~~~~--~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~- 478 (551)
|.++..+..++|.++|++..+..|.+ .|+|||+.|+++.+++++. +|+|+|.|.+.+.|++|.|++.| ++....
T Consensus 3 P~~~~~~~~~~r~~~l~~~~~~~g~~-~~~ing~~~~~~~~~~~~~G~~e~W~i~N~~~~~HP~HiHg~~F--~Vl~~~~ 79 (154)
T d1gska3 3 PSVQHERIQNIRTLKLAGTQDEYGRP-VLLLNNKRWHDPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSF--RVLDRRP 79 (154)
T ss_dssp GGGCCCCEEEEEEEEEEEEECTTSCE-EEEETTBCTTSCCCBCCBTTCEEEEEEEECSSSCEEEEESSCCE--EEEEEEE
T ss_pred CCCCCCCcceEEEEEEcccccccCCc-eEEECCcCcCCCcccccCCCCEEEEEEEeCCCCCCCEEECCceE--EEEEecC
Confidence 44555667789999999877777755 4999999999888777764 99999999999999999999955 454321
Q ss_pred --------------cCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCc
Q 008840 479 --------------CGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIM 543 (551)
Q Consensus 479 --------------~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GM 543 (551)
.+...++++.+++|||||.++||++++|+++|. ++|| ||||||||+|||.||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~i~~~~~-------------d~pG~w~~HCHil~Hed~GM 146 (154)
T d1gska3 80 FDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFG-------------PYSGRYVWHCHILEHEDYDM 146 (154)
T ss_dssp BCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECC-------------SCCEEEEEEESCHHHHTTTC
T ss_pred CCcccccccccccccCCCcCCCcccCcccccEEeCCCCEEEEEEEeC-------------CCCcceEEecCcchHhhCcC
Confidence 233345667889999999999999999999986 2678 999999999999999
Q ss_pred ccceEEcC
Q 008840 544 MRPLKLIK 551 (551)
Q Consensus 544 M~~~~V~~ 551 (551)
|++|+|+.
T Consensus 147 M~~~~V~e 154 (154)
T d1gska3 147 MRPMDITD 154 (154)
T ss_dssp EEEEEEBC
T ss_pred ceEEEEeC
Confidence 99999984
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.96 E-value=8.5e-29 Score=218.38 Aligned_cols=119 Identities=27% Similarity=0.414 Sum_probs=102.0
Q ss_pred eEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCe
Q 008840 65 KLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPT 144 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t 144 (551)
++++.+.... ..++.....+|+|| |++|||+|+|++||+|+|+|+|+|+.. ++
T Consensus 5 ~~~~~v~~~~--~~pdg~~~~~~~~N-----G~~PGP~i~v~~GD~v~i~l~N~l~~~--------------------~~ 57 (129)
T d1aoza1 5 HYKWEVEYMF--WAPNCNENIVMGIN-----GQFPGPTIRANAGDSVVVELTNKLHTE--------------------GV 57 (129)
T ss_dssp EEEEEEEEEE--ECTTSSCEEEEEET-----TBSSCCCEEEETTCEEEEEEEECCSSC--------------------CB
T ss_pred EEEEEEEEEE--ECCCCeEEEEEEEC-----CCcCCCeEEEECCcEEEEEEEeCCCCC--------------------Ce
Confidence 5666655553 45666578999998 999999999999999999999998753 79
Q ss_pred EEeeCCCCCCCC--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 145 VVHLHGGIDEPE--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 145 ~iH~HG~~~~~~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
++||||+++... +||.+. +++++|.||+++ +|+|+++ ++||||||||.. .|+++||+|+|||++++
T Consensus 58 ~iH~Hg~~~~~~~~~~~~~~--~~~~~I~PG~s~---~y~f~a~-~~Gt~~YH~H~~----~h~~~Gm~G~~iV~~~~ 125 (129)
T d1aoza1 58 VIHWHGILQRGTPWADGTAS--ISQCAINPGETF---FYNFTVD-NPGTFFYHGHLG----MQRSAGLYGSLIVDPPQ 125 (129)
T ss_dssp CEEEETCCCTTCGGGSCCBT--TTBCCBCTTCEE---EEEEECC-SCEEEEEEECST----TTGGGTCEEEEEEECCT
T ss_pred eeeeccceeeccCccccccc--cccceECCCCEE---EEEEECC-CCCceEEecCCH----HHHhCCCEEEEEEcCCC
Confidence 999999988765 788877 788899999999 9999997 799999999963 48899999999999766
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.96 E-value=9e-29 Score=217.87 Aligned_cols=114 Identities=21% Similarity=0.297 Sum_probs=96.2
Q ss_pred eecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC
Q 008840 76 KFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP 155 (551)
Q Consensus 76 ~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~ 155 (551)
.+.++.-...+|+|| | +|||+||+++||+|+|+|+|+|++. ....++++||||+++..
T Consensus 15 ~i~pdG~~~~~~~~n-----G-~pGP~I~v~~GD~v~v~l~N~l~~~----------------~~~~~tsiH~HGl~~~~ 72 (131)
T d1hfua1 15 NVSPDGFTRAGILVN-----G-VHGPLIRGGKNDNFELNVVNDLDNP----------------TMLRPTSIHWHGLFQRG 72 (131)
T ss_dssp EECTTSCCEEEEEET-----T-BSSCEEEEETTCCEEEEEEECCCCT----------------TSCCSBCEEEETCCCTT
T ss_pred EEcCCCeEeeEEEEC-----C-cCCCeEEEECCCEEEEEEEECCCCc----------------cccccceEEeCCcccCC
Confidence 345555467788887 8 8999999999999999999999862 11237999999998865
Q ss_pred C--CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 156 E--SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 156 ~--~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
. +||+++ +++|+|.||++| +|+|++.+++||||||||+. .|+++||+|+|||++++
T Consensus 73 ~~~~dgv~g--~~~~~I~PG~~~---~y~~~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 73 TNWADGADG--VNQCPISPGHAF---LYKFTPAGHAGTFWYHSHFG----TQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp CGGGSCCBT--TTBCCBCTTCEE---EEEECCTTCCEEEEEEECST----TGGGGTCEEEEEEECTT
T ss_pred CCCCCCCcc--cccceECCCCeE---EEEEeCCCCcceEEEecCCH----HHHhCCCEEEEEEcCCC
Confidence 4 899988 788999999999 99999767999999999963 58999999999999654
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=7e-29 Score=227.67 Aligned_cols=163 Identities=22% Similarity=0.306 Sum_probs=126.9
Q ss_pred CCCCC-cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcccCceeecCeEEEEEEEecCCCceEE
Q 008840 227 LPSGD-VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPRMTVRRRKYRFRIINASNARFFR 305 (551)
Q Consensus 227 lP~~~-~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~~~v~~~~~RlRllNas~~~~~~ 305 (551)
||+.+ .+|++|+||||.|+.+|++.+.... .....+..||.++|||+.+|++++++++|||||||+|+++.|+
T Consensus 2 lP~~yg~ddiplvi~D~~~~~~g~~~~~~~~------~~~~~g~~gd~~lvNG~~~p~~~~~~~~~RlR~iNa~~~~~~~ 75 (165)
T d1kv7a2 2 LPKQWGIDDVPVIVQDKKFSADGQIDYQLDV------MTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLN 75 (165)
T ss_dssp CCCCBTTTEEEEEEEEECBCTTSSBCCCCCH------HHHHHCCCCSEEEETTBSSCEEEEEEEEEEEEEEECCSSCCEE
T ss_pred CCCCCCCCcEeEEeEcccCCCCCCCccCCCC------cccCCCccCCEEEEcCcccceEeccCcEEEEEEEEcccCceee
Confidence 56632 7899999999999999987543211 1112356789999999999999998899999999999999999
Q ss_pred EEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEEEEEcc
Q 008840 306 FFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMKFIILK 385 (551)
Q Consensus 306 l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~f~v~~ 385 (551)
|++.+||+|+|||.||+++++|+.+++|.|+|||||||+|++++.+ ++.+.+........+.........+|++.+.+
T Consensus 76 ~~~~~g~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (165)
T d1kv7a2 76 FATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNK--PFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIA 153 (165)
T ss_dssp EEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECTTC--CEEEEECCCSSTTTTSTTTTSCEEEEEEEEEE
T ss_pred EEecCCCeEEEEEeCCccccCceEeCeEEECCCCEEEEEEECCCCC--cEEEEEEecCCCCccccCCCCCcccEEecCCC
Confidence 9997899999999999999889999999999999999999999864 55555543322222222223456799998876
Q ss_pred CCCCCCCCCCCCCC
Q 008840 386 NRETDPWRVPEKLI 399 (551)
Q Consensus 386 ~~~~~~~~lP~~L~ 399 (551)
.. .+..+|+.|.
T Consensus 154 ~~--~~~~LP~~L~ 165 (165)
T d1kv7a2 154 IS--ASGALPDTLS 165 (165)
T ss_dssp EE--CCCCCCSCCC
T ss_pred CC--CCCCCchhhC
Confidence 53 4567888774
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.95 E-value=5.6e-28 Score=219.11 Aligned_cols=146 Identities=21% Similarity=0.257 Sum_probs=111.5
Q ss_pred CCccccccCCCCcccccee--ccCCeeeeeeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEE
Q 008840 37 KLEMFVDELPDMPKIKGYY--AANGVVKPKKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVT 114 (551)
Q Consensus 37 ~~~~~~~~lp~pp~~~~~~--~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~ 114 (551)
.|++...+|-.||...+.. ..+|.. ..+++|.+.+++.++..+. ...+|+|| |++|||||++++||+|+|+
T Consensus 3 ~lp~~~~~l~~Pp~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~g~-~~~~~t~N-----G~~PGPti~v~~Gd~v~i~ 75 (153)
T d1mzya1 3 NLPRVKHTLVPPPFAHAHEQVAASGPV-INEFEMRIIEKEVQLDEDA-YLQAMTFD-----GSIPGPLMIVHEGDYVELT 75 (153)
T ss_dssp TSCEEECCCCCTTSBCSCCSSCSSSCC-EEEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCEEEEETTCEEEEE
T ss_pred cCccccccccCCCCCCccccccCCCCe-EEEEEEEEEEEEEEeCCCc-EEEEEEEC-----CCcCCCcEEEeCCCEEEEE
Confidence 5667777777776554321 122221 2468888889988987666 67889998 9999999999999999999
Q ss_pred EEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEE
Q 008840 115 WQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWY 194 (551)
Q Consensus 115 l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wY 194 (551)
++|++.. +..|+||+|.....||.+. ++ .|.||+++ +|+|+++ ++|||||
T Consensus 76 ~~N~~~~----------------------~~~H~~~~h~~~~~~~~~~--~~--~i~PG~t~---ty~f~a~-~~Gt~~Y 125 (153)
T d1mzya1 76 LINPPEN----------------------TMPHNIDFHAATGALGGGG--LT--LINPGEKV---VLRFKAT-RAGAFVY 125 (153)
T ss_dssp EEECTTC----------------------CSCBCCEETTSCSGGGGGG--GC--CBCTTEEE---EEEEECC-SCEEEEE
T ss_pred EEcCCCC----------------------ceEccCccccCCcCCCCCc--cc--cccCCCEE---EEEEEcC-CCceEEE
Confidence 9998553 4556666665555555543 33 58999999 9999995 8999999
Q ss_pred eccCCCc-hhhhhhccceEEEEEeCCC
Q 008840 195 HDHTMGL-TRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 195 H~H~~g~-t~~qv~~GL~G~~iV~dp~ 220 (551)
|||.++. +..|+++||+|+|||+ |+
T Consensus 126 H~H~~~~~~~~h~~~Gm~G~~iV~-P~ 151 (153)
T d1mzya1 126 HCAPGGPMIPWHVVSGMAGCIMVL-PR 151 (153)
T ss_dssp ECCCSTTHHHHHHHTTCEEEEEEE-CT
T ss_pred EeCCcccccHhHHhCCCEEEEEEe-cC
Confidence 9997654 6679999999999998 44
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.94 E-value=6.9e-27 Score=213.85 Aligned_cols=121 Identities=27% Similarity=0.344 Sum_probs=100.7
Q ss_pred eEEEEEEEEEEeecCCC-CCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 65 KLEIGMFEKKWKFHRDL-PPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 65 ~~~i~~~~~~~~~~~~~-~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
++++.+.+....+.++. ....+|+|| |++|||||++++||+|+|+|+|+|+.. .
T Consensus 35 ~y~l~~~~~~~~~~pdG~~~~~~~~~N-----G~~PGPtI~~~~Gd~v~v~l~N~l~~~--------------------~ 89 (162)
T d2q9oa1 35 SYVFNLTEVDNWMGPDGVVKEKVMLIN-----GNIMGPNIVANWGDTVEVTVINNLVTN--------------------G 89 (162)
T ss_dssp EEEEEEEEEEEEECTTSCEEEEEEEET-----TBSSCCCEEEETTCEEEEEEEEECSSC--------------------C
T ss_pred EEEEEEEEEEeeECCCCCcceeEEEEC-----CcccCCeEEEECCcEEEEEEEecCccc--------------------c
Confidence 56666667777777653 345689998 999999999999999999999999753 7
Q ss_pred eEEeeCCCCCCCC--CCCCCCcceecccc-CCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 144 TVVHLHGGIDEPE--SDGYAKSWFTAGFE-EKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 144 t~iH~HG~~~~~~--~DG~p~~~~t~~~i-~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+++||||+++... +||.+. ++++.+ .||+++ +|.|.++ ++||||||||.+ .|+++||+|+|||+||+
T Consensus 90 ~~ih~Hg~~~~~~~~~~g~~~--~~~~~i~~pg~~~---~y~f~~~-~~Gt~wYH~H~~----~q~~~Gl~G~~iV~~p~ 159 (162)
T d2q9oa1 90 TSIHWHGIHQKDTNLHDGANG--VTECPIPPKGGQR---TYRWRAR-QYGTSWYHSHFS----AQYGNGVVGTIQINGPA 159 (162)
T ss_dssp BCEEEETCCCTTCGGGSCCBT--TTBCCBCTTTEEE---EEEEECC-SCEEEEEEECST----TGGGGTCEEEEEEECCC
T ss_pred cccccccccccCCCcCCCCcc--cccceecCCCCEE---EeeecCC-CCEEEEeecCCH----HHHhCCCEEEEEECCCC
Confidence 9999999988754 888877 566665 558888 9999996 799999999975 48999999999999776
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.94 E-value=1.2e-26 Score=210.06 Aligned_cols=118 Identities=24% Similarity=0.350 Sum_probs=93.7
Q ss_pred eeEEEEEEEEEEeecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 008840 64 KKLEIGMFEKKWKFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVP 143 (551)
Q Consensus 64 ~~~~i~~~~~~~~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~ 143 (551)
.++++.+.+...++.++. .+.+|+|| |++|||+|++++||+|+|+|+|++..
T Consensus 27 ~~~~l~~~~~~~~~~~G~-~~~~~~~N-----g~~pGP~i~v~~Gd~v~v~~~N~~~~---------------------- 78 (151)
T d1kbva1 27 VRVKMETVEKTMKMDDGV-EYRYWTFD-----GDVPGRMIRVREGDTVEVEFSNNPSS---------------------- 78 (151)
T ss_dssp EEEEEEEEEEEEEEETTE-EEEEEEET-----TBSSCCBEEEETTCEEEEEEEECTTC----------------------
T ss_pred EEEEEEEEEEEEEeCCCc-EEEEEEEC-----CccCCCeEEEECCCEEEEEEEcCCCC----------------------
Confidence 457777888888888776 78899998 99999999999999999999997543
Q ss_pred eEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 144 TVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 144 t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
+..|+|+++.....||.. .++.|.||+++ +|+|+++ ++||||||||.+ .+..|+++||+|+|||++
T Consensus 79 ~~~H~~~~h~~~~~~~~~----~~~~i~PG~t~---~y~f~a~-~~Gt~~YH~H~~-~~~~h~~~Gm~G~liV~p 144 (151)
T d1kbva1 79 TVPHNVDFHAATGQGGGA----AATFTAPGRTS---TFSFKAL-QPGLYIYHCAVA-PVGMHIANGMYGLILVEP 144 (151)
T ss_dssp SSCBCCEETTCCSGGGGT----TTTCBCTTEEE---EEEEECC-SCEEEEEECCCS-SHHHHHHTTCEEEEEEEC
T ss_pred ceeeeccccccccCCCCc----ceeeeCCCCEE---EEEEeCC-CCeEEEEECCCC-ChHHHHhCCCEEEEEEEC
Confidence 223333334333444433 33458999999 9999996 799999999975 467899999999999984
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.86 E-value=3.8e-22 Score=184.48 Aligned_cols=97 Identities=22% Similarity=0.197 Sum_probs=81.0
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcc------eeccccC
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSW------FTAGFEE 171 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~------~t~~~i~ 171 (551)
+|||+||+++||+|+|+|+|+|+. +++|||||+.....+||.+..- -....|.
T Consensus 57 ~~GP~Ira~~GD~i~V~f~N~~~~---------------------~~siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~ 115 (180)
T d1sdda1 57 LLGPTLYAEVGDIMKVHFKNKAHK---------------------PLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVA 115 (180)
T ss_dssp SCCCCEEEETTCEEEEEEEECSSS---------------------CBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBC
T ss_pred CcCCeEEEECCcEEeeEEEeCCCC---------------------CccccccccccccccccccccccCCCCCccccccC
Confidence 899999999999999999999987 8999999999887766654311 1123689
Q ss_pred CCCCcceeeEEEEcCcc---------CceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 172 KGPTWTNETYHYHNMQQ---------PGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 172 pG~~~~~~~y~f~~~~~---------~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
||+++ +|+|.+.++ +||||||||.+. ..|+++||+|+|||+.+.
T Consensus 116 PGet~---tY~w~v~~~~gp~~~d~~~gt~~YHshv~~--~~~~~~GL~G~lIV~~~g 168 (180)
T d1sdda1 116 PGQEY---TYEWIISEHSGPTHDDPPCLTHIYYSYVNL--VEDFNSGLIGPLLICKKG 168 (180)
T ss_dssp TTCEE---EEEEECCGGGSCCSSSCSEEEEEEECCSSS--HHHHHTTCCEEEEEECTT
T ss_pred CCCEE---EEEEEeCCcccCccCCCCCEEEEEecCCCc--HHHhhCCceEEEEEccCC
Confidence 99999 999998753 479999999964 458999999999999654
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.86 E-value=3.2e-21 Score=176.37 Aligned_cols=116 Identities=16% Similarity=0.274 Sum_probs=94.7
Q ss_pred cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc----------CceeecC-eEEEEEEEecCC
Q 008840 232 VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW----------PRMTVRR-RKYRFRIINASN 300 (551)
Q Consensus 232 ~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~----------P~~~v~~-~~~RlRllNas~ 300 (551)
+.|.+|+|+||......++.....+ ....+|.++|||+.+ +.++|++ ++|||||||+|+
T Consensus 5 d~e~vi~lsDW~h~~~~~l~~~~~~----------~~~~pd~~liNGkg~~~~~~~~~~~~~~~v~~g~~~rlRlina~~ 74 (168)
T d1v10a2 5 DASTVITIADWYHSLSTVLFPNPNK----------APPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSC 74 (168)
T ss_dssp SGGGEEEEEEECSSCCC-------C----------CCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCS
T ss_pred CCccEEEEEECCCCCHHHHHhccCC----------CCCCCceeeecCCCCcCCCCcCCCceEEEECCCCEEEEEEEeccc
Confidence 4578999999976655555322211 123478999999843 4578988 899999999999
Q ss_pred CceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 301 ARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 301 ~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
.+.+.|+| +||+|+||+.||.++ +|+.+++|.|+|||||||+|++++.+| .|+|+..
T Consensus 75 ~~~~~~~i-d~H~~~Via~DG~~v-~P~~~d~i~i~~GqR~dvlv~~~~~~~-~y~ira~ 131 (168)
T d1v10a2 75 FPNYAFSI-DGHRMTVIEVDGVSH-QPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRAN 131 (168)
T ss_dssp SCCEEEEE-TTCCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEE
T ss_pred CceEEEEE-CCCeEEEEEeCCeec-CceEEeEEEEccCceEEEEEECCCCCC-cEEEEEE
Confidence 99999999 799999999999999 799999999999999999999998764 9999875
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=1.4e-22 Score=187.56 Aligned_cols=106 Identities=22% Similarity=0.395 Sum_probs=80.2
Q ss_pred ceEEEcccccCCCCC-CCcc--eeeeEEEEeeee-eeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcE
Q 008840 428 THLLINAKTLEDPVT-ETPK--TLDQTELVNLEE-FKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYV 503 (551)
Q Consensus 428 ~~~~INg~~f~~~~~-~~~~--~~~~~~l~n~~~-~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~ 503 (551)
..|+|||++|+.... ...+ .+++|+|.|.+. +.|++|.|++.| .+.. .+| .+++.++++|||||+|+|+ .
T Consensus 71 ~~~tING~~f~~~~p~~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F--~Vl~-~~g--~~~~~~~~~~kDTv~v~~~-~ 144 (181)
T d1kv7a3 71 HANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQF--RILS-ENG--KPPAAHRAGWKDTVKVEGN-V 144 (181)
T ss_dssp GCEEETTBCCCTTCCSEECCSSSCEEEEEECTTCCCCEEEEETTCCB--EEEE-BTT--BCCCGGGSSSBSEEEESSS-E
T ss_pred cceeECCEecCCCCCceEeCCCCEEEEEEEeCCCCCccCceEeceEE--EEEe-ccc--CCccccCCcceeEEEeCCC-c
Confidence 358999999985422 1122 289999999885 579999999944 5655 355 4566788999999999775 5
Q ss_pred EEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 504 TRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 504 v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
++|+++|+.. . +++| |+||||||+|||.|||++|+|
T Consensus 145 ~~v~v~f~~~-~---------~~~G~w~fHCHil~H~d~GMm~~f~V 181 (181)
T d1kv7a3 145 SEVLVKFNHD-A---------PKEHAYMAHCHLLEHEDTGMMLGFTV 181 (181)
T ss_dssp EEEEECCCSC-C---------CGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred eEEEEEEEee-C---------CCCCeEEEeCChHHHHhCCCCEEEEC
Confidence 5677777621 1 1446 999999999999999999987
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.86 E-value=1.4e-21 Score=180.73 Aligned_cols=117 Identities=20% Similarity=0.275 Sum_probs=95.0
Q ss_pred cCce-eEEEEEeeecCCCceEec-CCCCCCCCCCCCCCccCCceEEECCcc---------cCceeecC-eEEEEEEEecC
Q 008840 232 VFDR-PLFVFDRNFLTNGSIYMN-STGNNPSIHPQWQPEYFGDVIVVNGKA---------WPRMTVRR-RKYRFRIINAS 299 (551)
Q Consensus 232 ~~e~-~lvl~d~~~~~~g~~~~~-~~g~~~~~~~~~~~~~~gd~~lVNG~~---------~P~~~v~~-~~~RlRllNas 299 (551)
|.|. +|+|+||+.....++... ..+. ....|.+||||+. ...++|++ ++|||||||+|
T Consensus 2 D~D~~vi~lsDW~h~~~~~~~~~~~~~~----------~p~~d~~LINGkg~~~~~~~~~~~~~~v~~g~~~rlR~iN~~ 71 (181)
T d2q9oa2 2 DIDLGVFPITDYYYRAADDLVHFTQNNA----------PPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTS 71 (181)
T ss_dssp SEEEEEEEEEEECSSCHHHHHHHHTTSC----------CCCBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECC
T ss_pred CccCeeEEEEecCCCCHHHHHhhcccCC----------CCCcceEEECCcCCCCCCCCCcceEEEECCCCEEEEEEeccc
Confidence 4566 899999976544333211 1111 1236899999984 34688988 89999999999
Q ss_pred CCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 300 NARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 300 ~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
..+.+.|+| +||+|+|||+||.++ +|+.+++|.|+|||||||+|++++.+| +|+|+...
T Consensus 72 ~~~~~~~~i-d~h~~~via~DG~~v-~P~~~~~~~i~~GqRydvlv~a~~~~~-~Y~ir~~~ 130 (181)
T d2q9oa2 72 TENHFQVSL-VNHTMTVIAADMVPV-NAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTF 130 (181)
T ss_dssp SSCCEEEEE-TTBCEEEEEETTEEE-EEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEEC
T ss_pred CCccEEEEE-CCceEEEEEeCCeEc-cceEeCEEEecCCcEEEEEEeCCCCCc-cEEEEEec
Confidence 999999999 799999999999999 899999999999999999999988764 99998764
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.85 E-value=2.4e-21 Score=178.03 Aligned_cols=111 Identities=19% Similarity=0.259 Sum_probs=94.2
Q ss_pred cCceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCccc---------CceeecC-eEEEEEEEecCCC
Q 008840 232 VFDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKAW---------PRMTVRR-RKYRFRIINASNA 301 (551)
Q Consensus 232 ~~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~---------P~~~v~~-~~~RlRllNas~~ 301 (551)
+.|++|+|+||+.+...++. .+...+..+|||+.. +.++|++ ++|||||||+|..
T Consensus 10 D~e~vl~l~DW~h~~~~~~~---------------~~~~pd~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~ 74 (172)
T d1hfua2 10 DENTIITLADWYHIPAPSIQ---------------GAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCD 74 (172)
T ss_dssp STTSEEEEEEECSSCGGGCC------------------CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSS
T ss_pred CCeEEEEEEECCCCChHHhh---------------ccCCCCcEEECccCccCCCCCCCceEEEECCCCEEEEEEeeecCC
Confidence 57899999999765444331 123468999999843 5688998 8999999999999
Q ss_pred ceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 302 RFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 302 ~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
+.+.|+| +||+|+||+.||.++ +|+.+++|.|++||||||+|++++.+ ++|+|+..
T Consensus 75 ~~~~~~i-~~H~~~via~DG~~v-~P~~~~~l~i~~gqR~dvlv~~~~~~-~~Y~ira~ 130 (172)
T d1hfua2 75 PNWQFSI-DGHELTIIEVDGELT-EPHTVDRLQIFTGQRYSFVLDANQPV-DNYWIRAQ 130 (172)
T ss_dssp CCEEEEE-TTCCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCS-SEEEEEEE
T ss_pred ceEEEEe-CCCeEEEEEeCCEEc-ccEEeceEeccCCeEEEEEEEcCCCC-CcEEEEEE
Confidence 9999999 699999999999999 89999999999999999999998875 48999864
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=8e-22 Score=186.00 Aligned_cols=98 Identities=22% Similarity=0.244 Sum_probs=84.5
Q ss_pred CCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCc----------cee
Q 008840 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKS----------WFT 166 (551)
Q Consensus 97 ~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~----------~~t 166 (551)
.++||+||+++||+|+|+|+|+++. +++|||||++....+||.+.. ..+
T Consensus 82 G~lGP~Ira~~GD~v~V~~~N~~~~---------------------p~siH~HG~~~~~~~dg~~~~~~~~~~~~~~~~~ 140 (207)
T d2j5wa3 82 GILGPVIWAEVGDTIRVTFHNKGAY---------------------PLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPS 140 (207)
T ss_dssp TTSCCCEEEETTEEEEEEEEECSSS---------------------CBCCEEESSBCCGGGCSBCCBCC-------CCCC
T ss_pred CCcCceEEEECCCEEEEEEEECCCC---------------------CccccccccccCcccccccccCCCCcccCCcCcc
Confidence 4899999999999999999999987 899999999988877776531 135
Q ss_pred ccccCCCCCcceeeEEEEcCccCc---------eeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 167 AGFEEKGPTWTNETYHYHNMQQPG---------NTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 167 ~~~i~pG~~~~~~~y~f~~~~~~G---------t~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
++.|.||++| +|+|.+.++.| |||||||.+ ...|+++||+|+|||+.+.
T Consensus 141 ~~~V~PGet~---tY~w~v~~~~gP~~~d~~c~T~~YHshv~--~~~d~~~GL~G~lIV~~~g 198 (207)
T d2j5wa3 141 ASHVAPTETF---TYEWTVPKEVGPTNADPVCLAKMYYSAVD--PTKDIFTGLIGPMKICKKG 198 (207)
T ss_dssp SSCBCTTCEE---EEEEECCGGGSCCSSSCSEEEEEEECBSS--HHHHHHHTCEEEEEEECTT
T ss_pred cceecCCCEE---EEEEEecCCCCCccCCCCceeEEEccCCC--hhHhhccCceEEEEEccCC
Confidence 6789999999 99999987666 999999997 3468999999999999554
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.84 E-value=8e-21 Score=180.91 Aligned_cols=88 Identities=19% Similarity=0.244 Sum_probs=79.0
Q ss_pred CceEEECCcccCceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCC
Q 008840 271 GDVIVVNGKAWPRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSE 349 (551)
Q Consensus 271 gd~~lVNG~~~P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~ 349 (551)
++...+||...+.++|++ ++|||||||+|..+.+.|+| +||+|+|||+||.++ +|+.++.|.|+|||||||+|++++
T Consensus 64 ~~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i-dgh~~~VIa~DG~~v-~P~~v~~l~i~pGqRydvlv~~~~ 141 (209)
T d1aoza2 64 CKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAI-GNHQLLVVEADGNYV-QPFYTSDIDIYSGESYSVLITTDQ 141 (209)
T ss_dssp CCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEE-TTCCEEEEEETTEEE-EEEEESCEEECTTCEEEEEEECCS
T ss_pred ccccCCCCCCceEEEEcCCCEEEEEEEecCCceeEEEEe-CCCcEEEEecCCEEc-ccceeeeEEEccCcEEEEEEEecC
Confidence 344455666677899998 89999999999999999999 799999999999999 799999999999999999999998
Q ss_pred CCCceEEEecC
Q 008840 350 STSDVAILAND 360 (551)
Q Consensus 350 ~~g~~~~L~~~ 360 (551)
.++++|+++..
T Consensus 142 ~~~~~y~i~~~ 152 (209)
T d1aoza2 142 NPSENYWVSVG 152 (209)
T ss_dssp CTTCCEEEEEE
T ss_pred CCCCceEEEEe
Confidence 88888998864
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.82 E-value=5.9e-20 Score=168.22 Aligned_cols=112 Identities=14% Similarity=0.243 Sum_probs=91.6
Q ss_pred CceeEEEEEeeecCCCceEecCCCCCCCCCCCCCCccCCceEEECCcc---------cCceeecC-eEEEEEEEecCCCc
Q 008840 233 FDRPLFVFDRNFLTNGSIYMNSTGNNPSIHPQWQPEYFGDVIVVNGKA---------WPRMTVRR-RKYRFRIINASNAR 302 (551)
Q Consensus 233 ~e~~lvl~d~~~~~~g~~~~~~~g~~~~~~~~~~~~~~gd~~lVNG~~---------~P~~~v~~-~~~RlRllNas~~~ 302 (551)
.|.+|+|+||+.+ .+.+.. .....++..++||+. .+.+.|++ ++|||||||+|..+
T Consensus 12 ee~vi~lsDWyh~-~~~~~~-------------~~~~~~d~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlRlIN~~~~~ 77 (170)
T d1gyca2 12 ESTVITLTDWYHT-AARLGP-------------RFPLGADATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDP 77 (170)
T ss_dssp GGGEEEEEEECSS-CTTTSC-------------SSCSSCSEEEETTBCCBTTCTTSCCCEEEECTTCEEEEEEEECCSSC
T ss_pred CceEEEEeecCCC-hhhhcc-------------cCCCcCCcccccCccccCCCCCCCceEEEECCCCEEEEEEeecCCCc
Confidence 4578999999543 322210 011236788999884 35688988 89999999999999
Q ss_pred eEEEEEcCCceEEEEEcCCCCCCCceEecEEEEccCceEEEEEEcCCCCCceEEEecCC
Q 008840 303 FFRFFFTNGLRFIHVGSDSAYLGKPVVTNDTVLAPAEIADVVIDFSESTSDVAILANDA 361 (551)
Q Consensus 303 ~~~l~l~~g~~~~via~DG~~l~~P~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~ 361 (551)
.+.|+| +||+|+||+.||.++ +|+.++.|.|++||||||+|++++.+ ++|+|+...
T Consensus 78 ~~~~~i-d~h~~~via~DG~~v-~P~~~d~l~i~~gqRydvlv~~~~~~-~~y~ira~~ 133 (170)
T d1gyca2 78 NYTFSI-DGHNLTVIEVDGINS-QPLLVDSIQIFAAQRYSFVLNANQTV-GNYWIRANP 133 (170)
T ss_dssp CEEEEE-TTCCEEEEEETTEEE-EEEEESBEEECTTCEEEEEEECCSCS-SEEEEEEEE
T ss_pred eeeEEe-CCCeEEEEEeCCeec-cceEeeEEEecCCeEEEEEEeCCCCC-CcEEEEEec
Confidence 999999 699999999999999 89999999999999999999998765 489998753
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1e-20 Score=177.04 Aligned_cols=97 Identities=26% Similarity=0.324 Sum_probs=81.7
Q ss_pred CCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCC------CCcceecccc
Q 008840 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGY------AKSWFTAGFE 170 (551)
Q Consensus 97 ~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~------p~~~~t~~~i 170 (551)
.+|||+|+|++||+|+|+|+|+++. ++++|+||++....++|. .....+.+.|
T Consensus 72 G~lGP~Ira~~GD~v~V~~~N~~~~---------------------p~siH~HG~~~~~~~~g~~~~dg~~~~~~~~~~v 130 (192)
T d2j5wa1 72 GFLGPIIKAETGDKVYVHLKNLASR---------------------PYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKV 130 (192)
T ss_dssp TTSCCCEEEETTCEEEEEEEEESSS---------------------CBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCB
T ss_pred CCcCCeEEEECCcEEEEEEEeCCCC---------------------CcceeccCcccCCcccccccCCCCCCCCcccCcc
Confidence 4899999999999999999999987 899999999987655443 3333455679
Q ss_pred CCCCCcceeeEEEEcCc---------cCceeEEeccCCCchhhhhhccceEEEEEeCC
Q 008840 171 EKGPTWTNETYHYHNMQ---------QPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP 219 (551)
Q Consensus 171 ~pG~~~~~~~y~f~~~~---------~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp 219 (551)
.||+++ +|.|.+.+ ++||||||||.+ +..|+++||+|+|||+++
T Consensus 131 ~PG~t~---tY~~~~~~~~~p~~~d~~~gt~~YHsHv~--~~~~~~~GL~G~lIV~~~ 183 (192)
T d2j5wa1 131 YPGEQY---TYMLLATEEQSPGEGDGNCVTRIYHSHID--APKDIASGLIGPLIICKK 183 (192)
T ss_dssp CTTCEE---EEEEECCSTTSCCTTSCSEEEEEEECCSS--HHHHHHHTCEEEEEEECT
T ss_pred cCCCEE---EEEEEccCccccccCCCCCceEEEeCCCC--cHHHHhCCCeEEEEEccC
Confidence 999999 99999864 357999999996 456999999999999954
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=3.4e-20 Score=169.66 Aligned_cols=86 Identities=26% Similarity=0.343 Sum_probs=77.0
Q ss_pred CCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCc
Q 008840 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTW 176 (551)
Q Consensus 97 ~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~ 176 (551)
.++||+||+++||+|+|+|+|.++. +++|||||+.....+|| +|.||+++
T Consensus 82 g~lGP~IraevGD~i~V~f~N~a~~---------------------p~SiH~HGv~~~~~~~~---------~v~PGet~ 131 (179)
T d2j5wa4 82 GILGPQLHADVGDKVKIIFKNMATR---------------------PYSIHAHGVQTESSTVT---------PTLPGETL 131 (179)
T ss_dssp TTSCCCEEEETTEEEEEEEEECSSS---------------------CBCCEESSCBCSCSCCC---------CBCTTCEE
T ss_pred CccCCeEEEECCCEEEEEEEeCCCC---------------------CEeEeeccccCCCCCCC---------cccCCccE
Confidence 5899999999999999999999987 89999999998887776 47799999
Q ss_pred ceeeEEEEcCccCc---------eeEEeccCCCchhhhhhccceEEEEEe
Q 008840 177 TNETYHYHNMQQPG---------NTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 177 ~~~~y~f~~~~~~G---------t~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|+|.+.++.| |||||||.+ ...|+++||+|+|||+
T Consensus 132 ---tY~w~v~~~~gp~~~d~~c~t~~YHShv~--~~~d~~sGL~GplIVc 176 (179)
T d2j5wa4 132 ---TYVWKIPERSGAGTEDSACIPWAYYSTVD--QVKDLYSGLIGPLIVC 176 (179)
T ss_dssp ---EEEEECCGGGSCCTTSCSEEEEEEECCTT--HHHHHHTTCEEEEEEE
T ss_pred ---EEEEEecCccCCccCCCCceeEEEecCCC--cHHHhhCCCeEEEEEE
Confidence 99999876655 999999996 3468999999999998
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.79 E-value=9.6e-20 Score=170.66 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=76.6
Q ss_pred CcceEEEcccccCCCCCCC-------------------cc---eeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCcc
Q 008840 426 KPTHLLINAKTLEDPVTET-------------------PK---TLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQ 483 (551)
Q Consensus 426 ~~~~~~INg~~f~~~~~~~-------------------~~---~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~ 483 (551)
....|+|||++|.++.... .. .-+.+++.+...+.|++|+|+|.| .|.. .+|. .
T Consensus 35 ~~~~~~iNg~~f~~~~~p~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~HP~HlHG~~F--~Vl~-~~~~-~ 110 (190)
T d1v10a3 35 TTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPGGGNHPFHLHGHNF--DVVR-TPGS-S 110 (190)
T ss_dssp SSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEECCBSCEEEESSCCE--EEEE-CTTC-S
T ss_pred CEeEEEECCEecCCCCCchHHHhhcCCcccccccccceeEEccCccEEEEEeccCccccccccCceE--EEEE-cCCC-c
Confidence 3456999999997542210 00 034567777778899999999954 5554 2332 2
Q ss_pred CCCCcCCCcCccEEeCCCc-EEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 484 AVPVHEQGWKNVYKITPGY-VTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 484 ~~~~~e~~wkDTV~v~pg~-~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
......+.|||||.|++++ ++.|+++++ ||| |||||||++|++.|||.+|.+
T Consensus 111 ~~~~~~~~~rDTv~v~~~g~~~~irf~ad--------------npG~w~~HCHi~~H~~~GM~~~~~~ 164 (190)
T d1v10a3 111 VYNYVNPVRRDVVSIGGGGDNVTFRFVTD--------------NPGPWFLHCHIDWHLEAGLAVVFAE 164 (190)
T ss_dssp CCCCSSCCEESEEECCBSSCEEEEEEECC--------------SCEEEEEEESCHHHHTTTCEEEEEE
T ss_pred ccccccCcccCEEEeCCCeEEEEEEEEcC--------------CCeeEEEecCchhhhhCCCcEEEEE
Confidence 3344567899999999865 667766665 889 999999999999999999975
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.76 E-value=8e-19 Score=165.19 Aligned_cols=103 Identities=18% Similarity=0.218 Sum_probs=72.5
Q ss_pred eEEEcccccCCCCCCC-----------------------c-ceeeeEEEEee-eeeeeeeccccCceeeeeeeeccCCcc
Q 008840 429 HLLINAKTLEDPVTET-----------------------P-KTLDQTELVNL-EEFKACMNKINDAIKCNLSKHACGKKQ 483 (551)
Q Consensus 429 ~~~INg~~f~~~~~~~-----------------------~-~~~~~~~l~n~-~~~~~~~~~~~~~~~~~v~~~~~G~~~ 483 (551)
.|+|||++|..+.... + ..+.++.+.|. ..+.|++|+|+|.| .+.. .+|. .
T Consensus 36 ~wtINg~s~~~~~~p~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F--~vl~-~~g~-~ 111 (200)
T d1hfua3 36 RFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAF--SVVR-SAGS-S 111 (200)
T ss_dssp EEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCE--EEEE-CTTC-C
T ss_pred EEEECCEeccCCCCChhhhhhcCCcCcccccccCceEEecCCcceEEEEeeccccccCceeecCCcE--EEEe-ccCC-C
Confidence 6999999997643210 0 01233344343 34689999999854 5544 2342 2
Q ss_pred CCCCcCCCcCccEEeC-CCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 484 AVPVHEQGWKNVYKIT-PGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 484 ~~~~~e~~wkDTV~v~-pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
......+.|||||.|+ +|+++.|+++.+ ||| |||||||++|||.|||..|.+
T Consensus 112 ~~~~~~~~~rDtv~v~~~G~~~~ir~~ad--------------npG~w~~HCHi~~H~~~GM~~~~~~ 165 (200)
T d1hfua3 112 TYNFVNPVKRDVVSLGVTGDEVTIRFVTD--------------NPGPWFFHCHIEFHLMNGLAIVFAE 165 (200)
T ss_dssp CCCCSSBCEESEEECCSTTCEEEEEEECC--------------SCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred CCccccCcccceEEeCCCCEEEEEEEECC--------------CCeeeEEEeCCChHHhCCCcEEEEE
Confidence 3344567899999996 567888876655 889 999999999999999999976
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.75 E-value=2.5e-18 Score=155.27 Aligned_cols=108 Identities=16% Similarity=0.114 Sum_probs=81.7
Q ss_pred eecCCCCCccEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC
Q 008840 76 KFHRDLPPTPVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP 155 (551)
Q Consensus 76 ~~~~~~~~~~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~ 155 (551)
...++. .+..|.++ | .+||||+|++||+|+|+|+|..... . -+..||+||.....
T Consensus 42 ~~~~g~-~~~~~~~~-----~-~~~Pti~v~~Gd~V~i~v~N~~~~~--------~----------H~~~ih~~g~~~~~ 96 (153)
T d1e30a_ 42 AVLPGF-PFPSFEVH-----D-KKNPTLEIPAGATVDVTFINTNKGF--------G----------HSFDITKKGPPYAV 96 (153)
T ss_dssp ESCTTS-CSSCEEET-----T-EESCEEEECTTCEEEEEEEECCTTC--------C----------CCCEEESCCSSCCS
T ss_pred eccccc-ccceeecC-----C-CcCCeEEEeCCCEEEEEEEeCCCCC--------c----------ccEEEEcCCCCccc
Confidence 344555 56677776 6 4899999999999999999974321 0 16888999887654
Q ss_pred C----CCCCCCcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 156 E----SDGYAKSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 156 ~----~DG~p~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
. .++.+. ..++.+.||+++ +|.|.+.+++||||||||.++ |+.+||+|.||||
T Consensus 97 ~~~~~~~~~~~--~~~~~v~pg~~~---~~~f~~~~~pGty~YhCh~~~----H~~~GM~G~iiVe 153 (153)
T d1e30a_ 97 MPVIDPIVAGT--GFSPVPKDGKFG---YTNFTWHPTAGTYYYVCQIPG----HAATGQFGKIVVK 153 (153)
T ss_dssp SCCCCSEEEEB--CCCCCCBTTEEE---EEEEEECCCSEEEEEECCSTT----TTTTTCEEEEEEC
T ss_pred cccccccCCCc--cceeeecCCCEE---EEEEEeCCCCeEEEEeCCchh----HHHCCCEEEEEEC
Confidence 3 222221 234568899999 999986668999999999986 7889999999996
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.71 E-value=6.7e-18 Score=160.17 Aligned_cols=86 Identities=20% Similarity=0.142 Sum_probs=65.6
Q ss_pred eeeEEEEeee------eeeeeeccccCceeeeeeeeccCCc-----cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccC
Q 008840 448 LDQTELVNLE------EFKACMNKINDAIKCNLSKHACGKK-----QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHAN 516 (551)
Q Consensus 448 ~~~~~l~n~~------~~~~~~~~~~~~~~~~v~~~~~G~~-----~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~ 516 (551)
++++.+.|.+ ...|+||+|+|.| .+.....|.. .......+.|||||.|++|++++|+++++
T Consensus 88 ~veivl~n~~~~~~~~~~~HP~HlHG~~F--~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~ad----- 160 (214)
T d1aoza3 88 VVDVILQNANMMKENLSETHPWHLHGHDF--WVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD----- 160 (214)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEETTCCE--EEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-----
T ss_pred EEEEEEeccccccCCCCCCcceEeeccee--EEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecC-----
Confidence 4556676654 2358999999854 5554433321 12234567899999999999999988887
Q ss_pred CCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 517 ASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 517 ~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
||| ||||||+++|+|.|||..|.|
T Consensus 161 ---------npG~w~~HCH~~~H~~~GM~~~~~v 185 (214)
T d1aoza3 161 ---------NPGVWAFHCHIEPHLHMGMGVVFAE 185 (214)
T ss_dssp ---------SCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred ---------CCeeEEEEECcHHHHhCcCcEEEEE
Confidence 789 999999999999999999976
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.71 E-value=4.8e-18 Score=159.78 Aligned_cols=75 Identities=16% Similarity=0.227 Sum_probs=57.4
Q ss_pred eeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEe---CCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEe
Q 008840 457 EEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKI---TPGYVTRILVRFSYVHANASYPFDATAEPG-YVYH 532 (551)
Q Consensus 457 ~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v---~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~H 532 (551)
..+.|++|+|+|.| .+... +|. .......+.||||+.+ ++|++++|+++++ ||| ||||
T Consensus 91 ~~~~HP~HlHG~~F--~vv~~-~~~-~~~~~~~p~~rdt~~~~~~~~g~~~~irf~ad--------------npG~w~~H 152 (199)
T d1gyca3 91 PGAPHPFHLHGHAF--AVVRS-AGS-TTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTD--------------NPGPWFLH 152 (199)
T ss_dssp CSCSCEEEETTCCE--EEEEC-TTC-CCCCSSSCCEESEEECCCGGGTCEEEEEEECC--------------SCEEEEEE
T ss_pred CCCceeeeecCCcE--EEEee-cCC-CccCccCcccccceeeeccCCCcEEEEEEECC--------------CCeeEEEE
Confidence 35679999999954 55442 232 2334455678888776 7999999988776 789 9999
Q ss_pred eccccccccCcccceEE
Q 008840 533 CHILDHEDNIMMRPLKL 549 (551)
Q Consensus 533 CHiL~HED~GMM~~~~V 549 (551)
|||++|||.|||..|.+
T Consensus 153 CHi~~H~~~GM~~~~~~ 169 (199)
T d1gyca3 153 CHIDFHLEAGFAIVFAE 169 (199)
T ss_dssp ESSHHHHHTTCEEEEEE
T ss_pred cCchhhHhccCcEEEEE
Confidence 99999999999998854
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.70 E-value=1.9e-17 Score=157.60 Aligned_cols=75 Identities=13% Similarity=0.177 Sum_probs=57.9
Q ss_pred eeeeeeccccCceeeeeeeeccCCc---------------cCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCC
Q 008840 458 EFKACMNKINDAIKCNLSKHACGKK---------------QAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFD 522 (551)
Q Consensus 458 ~~~~~~~~~~~~~~~~v~~~~~G~~---------------~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~ 522 (551)
...|++|+|+|.| .+.....|.. .......+.|||||.|+|++.++|+++++
T Consensus 85 ~~~HP~HlHG~~F--~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~ir~~ad----------- 151 (216)
T d2q9oa3 85 SLPHPMHLHGHDF--LVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD----------- 151 (216)
T ss_dssp CCCEEEEESSSCE--EEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-----------
T ss_pred ccccceeecCceE--EEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCCEEEEEEECC-----------
Confidence 3568999999954 5554332210 01123457899999999999999988877
Q ss_pred CCCCCc-eEEeeccccccccCcccceE
Q 008840 523 ATAEPG-YVYHCHILDHEDNIMMRPLK 548 (551)
Q Consensus 523 ~~~~pg-~~~HCHiL~HED~GMM~~~~ 548 (551)
||| |+|||||++|++.|||..|.
T Consensus 152 ---npG~Wl~HCHi~~H~~~GM~~~~~ 175 (216)
T d2q9oa3 152 ---NPGAWLFHCHIAWHVSGGLSVDFL 175 (216)
T ss_dssp ---SCEEEEEEECCHHHHHTTCEEEEE
T ss_pred ---CCeEEEEEccCCcccccCCeEEEE
Confidence 889 99999999999999999984
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.5e-16 Score=142.85 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=71.3
Q ss_pred eEEEcccccCCCCCCC--cceeeeEEEEeeee--eeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEE
Q 008840 429 HLLINAKTLEDPVTET--PKTLDQTELVNLEE--FKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVT 504 (551)
Q Consensus 429 ~~~INg~~f~~~~~~~--~~~~~~~~l~n~~~--~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v 504 (551)
.++|||+.|.....-. ....+.|.|.|... ..|++|.|++.| .+.. . ...||||+.|+||+++
T Consensus 48 ~~~iNG~~~~~~~~l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f--~~~~--~---------g~~~~dtv~i~pg~~~ 114 (149)
T d2j5wa5 48 MHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSF--QYKH--R---------GVYSSDVFDIFPGTYQ 114 (149)
T ss_dssp EEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCE--EETT--T---------TCEEESEEEECTTCEE
T ss_pred ceEECCCcCCCCCCeEEEcCCcEEEEEEecCCCCCccceEEEeeEe--eeec--c---------CCCCcceEEECCCceE
Confidence 5899999996421111 11267899988643 467777777743 2211 1 2358999999999999
Q ss_pred EEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 505 RILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 505 ~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
++.++++ +|| |+||||+++|++.|||+.|.|+
T Consensus 115 ~~~~~a~--------------~pG~w~~HCHi~~H~~~GM~~~f~V~ 147 (149)
T d2j5wa5 115 TLEMFPR--------------TPGIWLLHCHVTDHIHAGMETTYTVL 147 (149)
T ss_dssp EEEECCC--------------SCEEEEEEECCHHHHHTTCEEEEEEE
T ss_pred EEEEeCC--------------CCeeEEEEcCCHHHHhccCceEEEEe
Confidence 9988776 778 9999999999999999999997
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=8.7e-16 Score=137.04 Aligned_cols=93 Identities=9% Similarity=-0.022 Sum_probs=68.2
Q ss_pred eEEEcccccCCCCCC--CcceeeeEEEEeeee--eeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEE
Q 008840 429 HLLINAKTLEDPVTE--TPKTLDQTELVNLEE--FKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVT 504 (551)
Q Consensus 429 ~~~INg~~f~~~~~~--~~~~~~~~~l~n~~~--~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v 504 (551)
.++|||+.|.....- .....++|.+.|... ..|++|.|++.| .+ ...|+||+.+.||+++
T Consensus 47 ~~tiNG~~~~~~p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f--~~--------------~~~~~dt~~i~pg~~~ 110 (145)
T d2j5wa2 47 MHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTY--LW--------------RGERRDTANLFPQTSL 110 (145)
T ss_dssp EEEETTBCTTCCCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCE--EE--------------TTEEESEEEECTTCEE
T ss_pred eEEECCccCCCCCCeEEEcCCeEEEEEEecCCCCcccceEecccEE--Ee--------------cccCccceEECCCCEE
Confidence 589999998632111 111267888887532 235566666533 11 2348999999999999
Q ss_pred EEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 505 RILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 505 ~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
++.++++ +|| |+||||+++|++.|||+.|+|.+
T Consensus 111 t~~~~a~--------------~pG~w~~HCH~~~H~~~GM~~~~~V~~ 144 (145)
T d2j5wa2 111 TLHMWPD--------------TEGTFNVECLTTDHYTGGMKQKYTVNQ 144 (145)
T ss_dssp EEEECCC--------------SCEEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred EEEEEcC--------------CCEeEEEEcCCHHHHhCCCeEEEEEec
Confidence 9988776 778 99999999999999999999964
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.56 E-value=1.4e-15 Score=134.73 Aligned_cols=96 Identities=17% Similarity=0.222 Sum_probs=71.0
Q ss_pred ceEEEcccccCCCCCCC-cceeeeEEEEeeee--eeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEE
Q 008840 428 THLLINAKTLEDPVTET-PKTLDQTELVNLEE--FKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVT 504 (551)
Q Consensus 428 ~~~~INg~~f~~~~~~~-~~~~~~~~l~n~~~--~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v 504 (551)
..++|||+.|+.+.... ....++|.+.|... ..|++|.|++.+ .+ .| ....|+||+.|.||+++
T Consensus 40 ~~~tiNG~~~~~p~~~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f--~~----~~-------~~~~~~dt~~i~pg~~~ 106 (139)
T d1sddb2 40 EFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTL--LE----NG-------TQQHQLGVWPLLPGSFK 106 (139)
T ss_dssp EEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCE--EE----CS-------SSCEEESSEEECTTEEE
T ss_pred ccceeCcEecCCCccccccCCcEEEEEEecCCCCCcccEEEcceEE--Ee----cc-------CCCCcCCeEEECCCCEE
Confidence 35899999996542211 11267899988643 246666666633 11 22 12358999999999999
Q ss_pred EEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 505 RILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 505 ~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
++.++++ +|| |+||||+++|++.|||+.|.|+
T Consensus 107 t~~~~~~--------------~pG~w~~HcH~~~H~~~GM~~~~~V~ 139 (139)
T d1sddb2 107 TLEMKAS--------------KPGWWLLDTEVGEIQRAGMQTPFLIV 139 (139)
T ss_dssp EEEEECC--------------SSEEEEEECCCHHHHTTTCEEEEEEE
T ss_pred EEEEecC--------------CCEeEEEEeCCHHHHhccCcEEEEEC
Confidence 9988876 778 9999999999999999999996
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=9.8e-15 Score=130.27 Aligned_cols=93 Identities=11% Similarity=0.099 Sum_probs=66.7
Q ss_pred ceEEEcccccCCCC-CC-CcceeeeEEEEeeee--eeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcE
Q 008840 428 THLLINAKTLEDPV-TE-TPKTLDQTELVNLEE--FKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYV 503 (551)
Q Consensus 428 ~~~~INg~~f~~~~-~~-~~~~~~~~~l~n~~~--~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~ 503 (551)
..++|||+.|.... .. .....++|.|.|... ..|++|.|++.+ ...+.|+||+.+.||++
T Consensus 47 ~~~tiNG~~~~~~p~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~----------------~~~~~~~dt~~i~pg~~ 110 (146)
T d1kcwa2 47 RMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQAL----------------TNKNYRIDTINLFPATL 110 (146)
T ss_dssp EEEESSSCCSSCCCCCEEETTEEEEEEEECCCSTTCCEEEEETTSCC----------------CCSSSCCSEEEECTTCE
T ss_pred ceEEECCccCCCCCcceEecCCeEEEEEEEcCCCCcccceEeeeeee----------------eccCCCcceEEecCCCE
Confidence 35899999987421 11 111256688877533 234444444321 12456899999999999
Q ss_pred EEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 504 TRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 504 v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+|.++++ +|| |+||||+++|++.|||+.|+|-
T Consensus 111 ~~v~f~~~--------------~pG~w~~HCH~~~H~~~GM~~~~~V~ 144 (146)
T d1kcwa2 111 FDAYMVAQ--------------NPGEWMLSCQNLNHLKAGLQAFFQVQ 144 (146)
T ss_dssp EEEEEEEC--------------SCEEEEEEECCHHHHHTCCEEEEEEE
T ss_pred EEEEEEcC--------------CCeeEEEEcCCHHHHhcCCeEEEEEE
Confidence 99988887 788 9999999999999999999985
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.51 E-value=9.2e-16 Score=131.55 Aligned_cols=91 Identities=10% Similarity=-0.033 Sum_probs=56.8
Q ss_pred cceEEEcccccCCCCCCCcc--eeeeEEEEeee--eeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCc
Q 008840 427 PTHLLINAKTLEDPVTETPK--TLDQTELVNLE--EFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGY 502 (551)
Q Consensus 427 ~~~~~INg~~f~~~~~~~~~--~~~~~~l~n~~--~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~ 502 (551)
+..|+|||+.|........+ ..+.|.+.|.. ...|++|.|++.| .+ ...|+||+.|.||+
T Consensus 21 ~~~~tiNG~~~~~~~~~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f--~~--------------~~~~~dtv~i~pg~ 84 (116)
T d1sdda2 21 SLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVL--EQ--------------NHHKISAITLVSAT 84 (116)
T ss_dssp CEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTC--EE--------------TTEECSCCCEETTC
T ss_pred CcEEEECCCcCCCCCCeEEeCCCEEEEEEeccccCCCceeEEEecccc--cc--------------CCcccceEeecccE
Confidence 34699999999742111111 27789999854 3456677777644 11 12489999999999
Q ss_pred EEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccce
Q 008840 503 VTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPL 547 (551)
Q Consensus 503 ~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~ 547 (551)
++++.++++ +|| |+||||+++|++.|||+-+
T Consensus 85 ~~~v~~~a~--------------~pG~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 85 STTANMTVS--------------PEGRWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp CBC----------------------CCCCCBCCSTTTGGGTCBCCC
T ss_pred EEEEEEEcC--------------CCeEEEEEcCCHHHHHccceecC
Confidence 999988877 678 9999999999999999854
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.49 E-value=2.8e-14 Score=127.85 Aligned_cols=104 Identities=18% Similarity=0.174 Sum_probs=79.7
Q ss_pred cEEEeecCCCCCCCCCcE----EEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCC
Q 008840 85 PVFAFGTSSLTASVPGPT----IEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDG 159 (551)
Q Consensus 85 ~~~~y~~~~~ng~~PGPt----i~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG 159 (551)
..|.|| |..+++| |+++.||+|+|++.|..+.. ++++|+||.+..-. .||
T Consensus 36 ~~~~fN-----G~~~~~t~~~~l~~~~Ge~vri~v~N~~~~~--------------------~~~~H~hG~~f~~v~~~G 90 (151)
T d1kbva2 36 EYVVFN-----GHVGALTGDNALKAKAGETVRMYVGNGGPNL--------------------VSSFHVIGEIFDKVYVEG 90 (151)
T ss_dssp SEEEET-----TSTTTTSGGGCEEEETTEEEEEEEEEEESSC--------------------CEEEEEETCCBSEEEGGG
T ss_pred cEEEEC-----CccCCccCccceEEEeCCeEEEEEEcCCccc--------------------cccceeecceeeEEecCC
Confidence 457776 8887766 99999999999999976542 79999999986432 355
Q ss_pred CCC--cceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 160 YAK--SWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 160 ~p~--~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
.+. .......|.||+++ +++|+++ +||+||||||.. ..+..+||.|.|+|++++
T Consensus 91 ~~~~~~~~~T~~v~pg~~~---~~~f~a~-~PG~y~~h~H~l---~~~~~~G~~g~~~V~~~~ 146 (151)
T d1kbva2 91 GKLINENVQSTIVPAGGSA---IVEFKVD-IPGNYTLVDHSI---FRAFNKGALGQLKVEGAE 146 (151)
T ss_dssp SSCEECSBSEEEECTTEEE---EEEEEEC-SCEEEEEEESST---HHHHHSSCEEEEEEESCC
T ss_pred CcCCcccceeEecccCcee---EEeeecC-CCceEEEECCcH---HHHHhccCeEEEEEcCCC
Confidence 432 11222358899998 9999997 799999999963 124568999999999665
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.44 E-value=9.8e-14 Score=124.22 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=73.9
Q ss_pred cceEEEcccccCCCCCCC--cc--eeeeEEEEeee-eeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCC
Q 008840 427 PTHLLINAKTLEDPVTET--PK--TLDQTELVNLE-EFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPG 501 (551)
Q Consensus 427 ~~~~~INg~~f~~~~~~~--~~--~~~~~~l~n~~-~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg 501 (551)
+..|.|||+.+....... .+ ...+|.+.|.. ...+++|.|++.| ... +.+|... ...|+||+.|+||
T Consensus 35 p~~~~fNG~~~~~t~~~~l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f--~~v-~~~G~~~-----~~~~~~T~~v~pg 106 (151)
T d1kbva2 35 PEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIF--DKV-YVEGGKL-----INENVQSTIVPAG 106 (151)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCB--SEE-EGGGSSC-----EECSBSEEEECTT
T ss_pred CcEEEECCccCCccCccceEEEeCCeEEEEEEcCCccccccceeeccee--eEE-ecCCCcC-----CcccceeEecccC
Confidence 456899999886432111 11 15667888854 4568888888844 333 2456322 2347999999999
Q ss_pred cEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccc-cccccCcccceEEc
Q 008840 502 YVTRILVRFSYVHANASYPFDATAEPG-YVYHCHIL-DHEDNIMMRPLKLI 550 (551)
Q Consensus 502 ~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL-~HED~GMM~~~~V~ 550 (551)
+++.++++|+ +|| |+||||+| +|++.|||+.|+|-
T Consensus 107 ~~~~~~f~a~--------------~PG~y~~h~H~l~~~~~~G~~g~~~V~ 143 (151)
T d1kbva2 107 GSAIVEFKVD--------------IPGNYTLVDHSIFRAFNKGALGQLKVE 143 (151)
T ss_dssp EEEEEEEEEC--------------SCEEEEEEESSTHHHHHSSCEEEEEEE
T ss_pred ceeEEeeecC--------------CCceEEEECCcHHHHHhccCeEEEEEc
Confidence 9999999998 789 99999986 56899999999983
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=2.2e-13 Score=121.27 Aligned_cols=93 Identities=11% Similarity=-0.011 Sum_probs=75.2
Q ss_pred CCCCCCC--cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccC
Q 008840 94 LTASVPG--PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEE 171 (551)
Q Consensus 94 ~ng~~PG--Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~ 171 (551)
+||..+| |.|++++||++++++.|..... ..+++|+||........+ .+ ...|.
T Consensus 51 iNG~~~~~~p~l~~~~gd~v~~~l~n~g~~~-------------------~~h~~H~hg~~~~~~~~~--~d---t~~i~ 106 (146)
T d1kcwa2 51 VNGYTFGSLPGLSMCAEDRVKWYLFGMGNEV-------------------DVHAAFFHGQALTNKNYR--ID---TINLF 106 (146)
T ss_dssp SSSCCSSCCCCCEEETTEEEEEEEECCCSTT-------------------CCEEEEETTSCCCCSSSC--CS---EEEEC
T ss_pred ECCccCCCCCcceEecCCeEEEEEEEcCCCC-------------------cccceEeeeeeeeccCCC--cc---eEEec
Confidence 3599999 9999999999999999965431 168999999876543222 22 22588
Q ss_pred CCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 172 KGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 172 pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
||+++ +|+|.++ .+|+||||||.. .|..+||.|.|+|++
T Consensus 107 pg~~~---~v~f~~~-~pG~w~~HCH~~----~H~~~GM~~~~~V~~ 145 (146)
T d1kcwa2 107 PATLF---DAYMVAQ-NPGEWMLSCQNL----NHLKAGLQAFFQVQE 145 (146)
T ss_dssp TTCEE---EEEEEEC-SCEEEEEEECCH----HHHHTCCEEEEEEEC
T ss_pred CCCEE---EEEEEcC-CCeeEEEEcCCH----HHHhcCCeEEEEEEe
Confidence 99999 9999996 899999999973 578999999999984
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=3.2e-13 Score=120.70 Aligned_cols=100 Identities=17% Similarity=0.075 Sum_probs=80.9
Q ss_pred cEEEeecCCCCCCCCC--cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC
Q 008840 85 PVFAFGTSSLTASVPG--PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK 162 (551)
Q Consensus 85 ~~~~y~~~~~ng~~PG--Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~ 162 (551)
..|++| |..+| |.|++++||+|++++.|..... ..+++|+||.......+|.+.
T Consensus 47 ~~~~iN-----G~~~~~~~~l~v~~Gd~v~~~l~n~g~~~-------------------~~h~~H~HG~~f~~~~~g~~~ 102 (149)
T d2j5wa5 47 KMHAIN-----GRMFGNLQGLTMHVGDEVNWYLMGMGNEI-------------------DLHTVHFHGHSFQYKHRGVYS 102 (149)
T ss_dssp EEEEET-----TBCTTCCCCCEEETTCEEEEEEEECCSTT-------------------CCEEEEESSCCEEETTTTCEE
T ss_pred cceEEC-----CCcCCCCCCeEEEcCCcEEEEEEecCCCC-------------------CccceEEEeeEeeeeccCCCC
Confidence 457765 88887 8899999999999999976541 169999999876666667653
Q ss_pred cceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 163 SWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 163 ~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.....|.||+++ +|+|.++ .+|+||||||.. .|..+||.|.++|.+
T Consensus 103 --~dtv~i~pg~~~---~~~~~a~-~pG~w~~HCHi~----~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 103 --SDVFDIFPGTYQ---TLEMFPR-TPGIWLLHCHVT----DHIHAGMETTYTVLQ 148 (149)
T ss_dssp --ESEEEECTTCEE---EEEECCC-SCEEEEEEECCH----HHHHTTCEEEEEEEC
T ss_pred --cceEEECCCceE---EEEEeCC-CCeeEEEEcCCH----HHHhccCceEEEEec
Confidence 223358899998 9999996 899999999983 478899999999973
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.40 E-value=3e-13 Score=119.37 Aligned_cols=99 Identities=14% Similarity=0.040 Sum_probs=78.5
Q ss_pred ccEEEeecCCCCCC-CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC
Q 008840 84 TPVFAFGTSSLTAS-VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK 162 (551)
Q Consensus 84 ~~~~~y~~~~~ng~-~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~ 162 (551)
...+++| |. ++.|.|++++||.|++++.|..... ..+++|+||.......+|.+.
T Consensus 39 ~~~~tiN-----G~~~~~p~~~v~~gd~v~~~l~n~g~~~-------------------~~h~iH~HG~~f~~~~~~~~~ 94 (139)
T d1sddb2 39 HEFHAIN-----GMIYNLPGLRMYEQEWVRLHLLNLGGSR-------------------DIHVVHFHGQTLLENGTQQHQ 94 (139)
T ss_dssp CEEEEET-----TBSSCCCCCEEETTCEEEEEEEECCCTT-------------------CCEEEEETTCCEEECSSSCEE
T ss_pred cccceeC-----cEecCCCccccccCCcEEEEEEecCCCC-------------------CcccEEEcceEEEeccCCCCc
Confidence 3456776 54 4788999999999999999965431 169999999887665555432
Q ss_pred cceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEE
Q 008840 163 SWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYIL 216 (551)
Q Consensus 163 ~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV 216 (551)
.....|.||+++ +|+|.++ ++|+||||||. ..|..+||+|.++|
T Consensus 95 --~dt~~i~pg~~~---t~~~~~~-~pG~w~~HcH~----~~H~~~GM~~~~~V 138 (139)
T d1sddb2 95 --LGVWPLLPGSFK---TLEMKAS-KPGWWLLDTEV----GEIQRAGMQTPFLI 138 (139)
T ss_dssp --ESSEEECTTEEE---EEEEECC-SSEEEEEECCC----HHHHTTTCEEEEEE
T ss_pred --CCeEEECCCCEE---EEEEecC-CCEeEEEEeCC----HHHHhccCcEEEEE
Confidence 334468999998 9999996 89999999997 34789999999998
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=5e-13 Score=118.80 Aligned_cols=96 Identities=11% Similarity=0.014 Sum_probs=77.0
Q ss_pred cEEEeecCCCCCCCCC--cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC
Q 008840 85 PVFAFGTSSLTASVPG--PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK 162 (551)
Q Consensus 85 ~~~~y~~~~~ng~~PG--Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~ 162 (551)
.+|+.| |..+| |.|++++||+|++++.|..... ..+++|+||...... +...
T Consensus 46 ~~~tiN-----G~~~~~~p~l~v~~Gd~v~~~l~n~g~~~-------------------~~h~iH~hG~~f~~~--~~~~ 99 (145)
T d2j5wa2 46 KMHSMN-----GFMYGNQPGLTMCKGDSVVWYLFSAGNEA-------------------DVHGIYFSGNTYLWR--GERR 99 (145)
T ss_dssp EEEEET-----TBCTTCCCCCEEETTCCEEEEEECCCSTT-------------------CCEEEEETTCCEEET--TEEE
T ss_pred ceEEEC-----CccCCCCCCeEEEcCCeEEEEEEecCCCC-------------------cccceEecccEEEec--ccCc
Confidence 357765 99999 9999999999999999965431 169999999875432 2221
Q ss_pred cceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 163 SWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 163 ~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
....|.||++. +|+|.++ .+|+||||||.. .|..+||.|.|+|+
T Consensus 100 ---dt~~i~pg~~~---t~~~~a~-~pG~w~~HCH~~----~H~~~GM~~~~~V~ 143 (145)
T d2j5wa2 100 ---DTANLFPQTSL---TLHMWPD-TEGTFNVECLTT----DHYTGGMKQKYTVN 143 (145)
T ss_dssp ---SEEEECTTCEE---EEEECCC-SCEEEEEEECSH----HHHHTTCEEEEEEE
T ss_pred ---cceEECCCCEE---EEEEEcC-CCEeEEEEcCCH----HHHhCCCeEEEEEe
Confidence 22358899998 9999996 899999999973 47889999999998
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.31 E-value=2.4e-12 Score=112.20 Aligned_cols=90 Identities=12% Similarity=0.048 Sum_probs=71.5
Q ss_pred cEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcc
Q 008840 85 PVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSW 164 (551)
Q Consensus 85 ~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~ 164 (551)
..|+.+ +.+++|+|+|++||+|+++++|.... +.++|+|++....
T Consensus 41 ~~~~~~-----~~f~p~~i~V~~Gd~V~~~ltN~d~~---------------------~~v~H~~~i~~~~--------- 85 (132)
T d1fwxa1 41 YMSSVA-----PSFSIESFTVKEGDEVTVIVTNLDEI---------------------DDLTHGFTMGNYG--------- 85 (132)
T ss_dssp EEEEET-----TEESCSEEEEETTCEEEEEEEECCCS---------------------TTCCEEEEETTTT---------
T ss_pred EEEeec-----CcccCCEEEEcCCCEEEEEEEcCCCC---------------------ccceEeechhhhc---------
Confidence 445554 88999999999999999999998655 5788999885432
Q ss_pred eeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 165 FTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 165 ~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+.. .+.||++. +|.|+++ .+||||||||..... .| .||.|.|||+
T Consensus 86 ~~~-~~~PG~~~---~~~F~a~-~~G~y~~~C~~~cg~-~H--~~M~G~iiVe 130 (132)
T d1fwxa1 86 VAM-EIGPQMTS---SVTFVAA-NPGVYWYYCQWFCHA-LH--MEMRGRMLVE 130 (132)
T ss_dssp EEE-EECTTCEE---EEEEECC-SCEEEEEECCSCCST-TC--TTCEEEEEEE
T ss_pred ccc-ccCCCEEE---EEEEeCC-CCeEEEEECccccCc-ch--hcCEEEEEEE
Confidence 111 47799998 9999996 999999999964322 12 6999999998
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=99.25 E-value=5.5e-12 Score=106.86 Aligned_cols=86 Identities=15% Similarity=0.010 Sum_probs=67.1
Q ss_pred cEEEeecCCCCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcc
Q 008840 85 PVFAFGTSSLTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSW 164 (551)
Q Consensus 85 ~~~~y~~~~~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~ 164 (551)
.+|+++ ..+..++|+|++||+|+++|+|.... .+++++|+...
T Consensus 27 ~~~~~~-----~~~~P~~i~v~~Gd~V~~~~~n~d~~---------------------~H~~~i~~~~~----------- 69 (112)
T d1ibya_ 27 NIRAFN-----VLNEPETLVVKKGDAVKVVVENKSPI---------------------SEGFSIDAFGV----------- 69 (112)
T ss_dssp EEEEEE-----EEEESCEEEEETTCEEEEEEEECSSS---------------------CEEEEEGGGTE-----------
T ss_pred EEEeec-----CCCCCCEEEEeCCCEEEEEEEeCCCC---------------------ceeeeeccccc-----------
Confidence 345555 55566699999999999999998554 57877776522
Q ss_pred eeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 165 FTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 165 ~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.. .+.||++. +|+|+++ ++|+||||||.+.. .+||.|.|||.|
T Consensus 70 -~~-~~~pG~t~---~~~f~~~-~~G~y~y~C~~~~~-----~~~M~G~i~V~e 112 (112)
T d1ibya_ 70 -QE-VIKAGETK---TISFTAD-KAGAFTIWCQLHPK-----NIHLPGTLNVVE 112 (112)
T ss_dssp -EE-EECTTCEE---EEEEECC-SCEEEEEBCSSSCT-----TTBCCEEEEEEC
T ss_pred -cc-ccCCcceE---EEEEEec-cceEEEEECcccCh-----hhcCeEEEEEEC
Confidence 11 46799988 9999996 89999999998753 368999999974
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.18 E-value=7.7e-13 Score=112.98 Aligned_cols=93 Identities=13% Similarity=-0.003 Sum_probs=58.6
Q ss_pred cEEEeecCCCCCCCCC--cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCC
Q 008840 85 PVFAFGTSSLTASVPG--PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAK 162 (551)
Q Consensus 85 ~~~~y~~~~~ng~~PG--Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~ 162 (551)
..|++| |..+| |.|++++||+|++++.|..... ..+++|+||....- +|...
T Consensus 22 ~~~tiN-----G~~~~~~~~~~v~~Gd~v~~~v~n~g~~~-------------------~~h~iH~Hg~~f~~--~~~~~ 75 (116)
T d1sdda2 22 LMYTVN-----GYVNGTMPDITVCAHDHISWHLIGMSSGP-------------------ELFSIHFNGQVLEQ--NHHKI 75 (116)
T ss_dssp EEECSS-----SCCSSCCCCCCCCCC------BBCCCSSS-------------------CEECCBCSSTTCEE--TTEEC
T ss_pred cEEEEC-----CCcCCCCCCeEEeCCCEEEEEEeccccCC-------------------CceeEEEecccccc--CCccc
Confidence 357765 88888 6799999999999999965431 16899999987643 34333
Q ss_pred cceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEE
Q 008840 163 SWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAY 214 (551)
Q Consensus 163 ~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~ 214 (551)
+. ..|.||++. +|+|.++ .+|+||||||... |..+||.|.|
T Consensus 76 dt---v~i~pg~~~---~v~~~a~-~pG~w~~HCH~~~----H~~~GM~a~i 116 (116)
T d1sdda2 76 SA---ITLVSATST---TANMTVS-PEGRWTIASLIPR----HFQAGMQAYI 116 (116)
T ss_dssp SC---CCEETTCCB---C---------CCCCCBCCSTT----TGGGTCBCCC
T ss_pred ce---EeecccEEE---EEEEEcC-CCeEEEEEcCCHH----HHHccceecC
Confidence 22 258899999 9999996 8999999999853 6779999864
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.15 E-value=1.4e-11 Score=93.52 Aligned_cols=47 Identities=21% Similarity=0.371 Sum_probs=40.9
Q ss_pred ccCCCCCcceeeEEEEcCccCc---------eeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 169 FEEKGPTWTNETYHYHNMQQPG---------NTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~~G---------t~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
.|.||++| +|+|.+.+.+| |||||+|.+ ...|+.+||+|+|||+++.
T Consensus 2 ~V~PG~t~---tY~w~v~~~~gp~~~d~~c~t~~YHsHv~--~~~q~~~GL~G~liV~~~g 57 (67)
T d1sddb1 2 AIQPNKTY---TYVWHATTRSGPENPGSACRAWAYYSAVN--PEKDIHSGLIGPLLICRKG 57 (67)
T ss_dssp CBCTTCCE---ECCEECCTTTSCCSSSCSEEEEEEECCSS--HHHHHTTTCEEEEEEECTT
T ss_pred cCCCCCeE---EEEEEcCCcCCCccCCCCceeEEEEcccc--hHHHhhCCceEEEEEcCCC
Confidence 48899999 99999987776 999999997 4468999999999999654
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.05 E-value=1.1e-10 Score=105.15 Aligned_cols=105 Identities=17% Similarity=0.189 Sum_probs=67.5
Q ss_pred CcceEEEcccccCCCCCCCcce-e-ee-EEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCc
Q 008840 426 KPTHLLINAKTLEDPVTETPKT-L-DQ-TELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGY 502 (551)
Q Consensus 426 ~~~~~~INg~~f~~~~~~~~~~-~-~~-~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~ 502 (551)
.+..+.+||+..........+. + |. |.+.+..+..+.+|.+++.| .... .+|+...++ ....+|+.|+||+
T Consensus 49 ~Pt~vvFNG~v~altg~~~l~akvGErV~i~~~~~n~~s~fHliG~hF--D~V~-~~G~~~~~p---~~~~qTv~VppG~ 122 (173)
T d2bw4a2 49 TPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHG--DYVW-ATGKFRNPP---DLDQETWLIPGGT 122 (173)
T ss_dssp CCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCE--EEEE-TTCCTTSCC---EEEESCCCBCTTE
T ss_pred CCCEEEECCCccccccccCcccccCCeEEEEecCCCCCccceecccee--EEEC-CCCcccCCC---cCCceeEEccCCc
Confidence 3567889997654321111110 1 11 22322334455677777743 3333 467432211 2346799999999
Q ss_pred EEEEEEEEeccccCCCCCCCCCCCCc-eEEeecc-ccccccCcccceEEc
Q 008840 503 VTRILVRFSYVHANASYPFDATAEPG-YVYHCHI-LDHEDNIMMRPLKLI 550 (551)
Q Consensus 503 ~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHi-L~HED~GMM~~~~V~ 550 (551)
.+.+.++|+ +|| |+||||. ++|++.|||+.|+|.
T Consensus 123 a~~ve~~f~--------------~PG~y~~v~H~l~ea~~~G~~g~l~V~ 158 (173)
T d2bw4a2 123 AGAAFYTFR--------------QPGVYAYVNHNLIEAFELGAAGHFKVT 158 (173)
T ss_dssp EEEEEEECC--------------SCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred cEEEEEEec--------------CceEEEEEechHHHHHhCCCEEEEEEc
Confidence 999999998 789 9999995 589999999999984
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.85 E-value=2.2e-09 Score=96.46 Aligned_cols=101 Identities=18% Similarity=0.165 Sum_probs=66.4
Q ss_pred cceEEEcccccCCCCCCCc--ce--eeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcC--ccEEeCC
Q 008840 427 PTHLLINAKTLEDPVTETP--KT--LDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWK--NVYKITP 500 (551)
Q Consensus 427 ~~~~~INg~~f~~~~~~~~--~~--~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wk--DTV~v~p 500 (551)
+....+||+.+........ +. .+ +.+.+..+..+.+|.+++.| .... .+|+... ...+ +|+.|+|
T Consensus 50 P~~vvFNG~~galt~~~~l~akvGe~V-ri~~~~~N~~ssfHlIG~hf--D~V~-~~G~~~n-----~p~~~~qT~~V~p 120 (177)
T d1oe1a2 50 PSHIVFNGKVGALTGANALTAKVGETV-LLIHSQANRDTRPHLIGGHG--DWVW-ETGKFAN-----PPQRDLETWFIRG 120 (177)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTCEE-EEEEEESSSCBCEEETTCCE--EEEE-TTCCTTS-----CCEEEESBCCBCT
T ss_pred CcEEEECCccccccCCCCcccccCCeE-EEEecCCCCCccceeccccc--ceEc-cCCeeCC-----CCCcCceeEEecC
Confidence 5567889987654311111 11 11 11233334556678887743 3322 4664322 1234 5999999
Q ss_pred CcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecc-ccccccCcccceEEc
Q 008840 501 GYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHI-LDHEDNIMMRPLKLI 550 (551)
Q Consensus 501 g~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHi-L~HED~GMM~~~~V~ 550 (551)
|+.+.+.++|+ .|| |+||||. .+|++.|||+.|+|.
T Consensus 121 G~~~~v~~tf~--------------~PG~Y~fV~H~L~ea~~~Ga~g~l~V~ 158 (177)
T d1oe1a2 121 GSAGAALYTFK--------------QPGVYAYLNHNLIEAFELGAAGHIKVE 158 (177)
T ss_dssp TEEEEEEEECC--------------SCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred CccEEEEEEec--------------CceEEEEEecHHHHHHhcCCeEEEEec
Confidence 99999999998 678 9999996 589999999999984
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.78 E-value=1e-08 Score=88.59 Aligned_cols=84 Identities=14% Similarity=0.138 Sum_probs=63.0
Q ss_pred CCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCC
Q 008840 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPT 175 (551)
Q Consensus 96 g~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~ 175 (551)
.++..+.|+|++||+|+++++|.... .-++|.+++..- | +.. .+.||++
T Consensus 46 ~~f~p~~i~V~~Gd~V~~~vtn~~~s---------------------~Dv~H~f~ip~~----~-----v~~-~~~PG~t 94 (131)
T d1qnia1 46 PQYGMTDFKVKEGDEVTVYITNLDMV---------------------EDVTHGFCMVNH----G-----VSM-EISPQQT 94 (131)
T ss_dssp TEESCSEEEEETTCEEEEEEEECCCS---------------------TTCCEEEEETTT----T-----EEE-EECTTCE
T ss_pred cCCccceEEecCCCEEEEEEEccCCC---------------------CcceEEEEEecc----C-----ccc-ccCCCce
Confidence 56778999999999999999998765 344554444321 1 222 3679998
Q ss_pred cceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 176 WTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 176 ~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
. ++.|.++ ++|+|||||+...... | .+|.|.|+|+
T Consensus 95 ~---~~~f~~~-~~G~y~~~C~~~cg~~-H--~~M~g~i~Ve 129 (131)
T d1qnia1 95 A---SVTFTAG-KPGVYWYYCNWFCHAL-H--MEMVGRMLVE 129 (131)
T ss_dssp E---EEEEECC-SSEEEEEECCSCCSTT-G--GGCEEEEEEE
T ss_pred E---EEEEEcC-CCEEEEEECccccCcc-h--hcCeeEEEEE
Confidence 8 9999996 9999999999643222 3 6899999998
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=98.75 E-value=2.9e-09 Score=94.77 Aligned_cols=100 Identities=11% Similarity=0.126 Sum_probs=62.7
Q ss_pred eEEEcccccCCCCCCCcceeeeEEEEeeee-eeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEE
Q 008840 429 HLLINAKTLEDPVTETPKTLDQTELVNLEE-FKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRIL 507 (551)
Q Consensus 429 ~~~INg~~f~~~~~~~~~~~~~~~l~n~~~-~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~ 507 (551)
.|.+||.. .....-.......|.+.|... ..|.++.|.+.+.+ .. .. .......++.++..+.||++..+.
T Consensus 51 ~~~~~~~~-~Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~--~~-~~----~~~~~~~~~~~~~~v~pg~~~~~~ 122 (153)
T d1e30a_ 51 SFEVHDKK-NPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPY--AV-MP----VIDPIVAGTGFSPVPKDGKFGYTN 122 (153)
T ss_dssp CEEETTEE-SCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSC--CS-SC----CCCSEEEEBCCCCCCBTTEEEEEE
T ss_pred eeecCCCc-CCeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCc--cc-cc----cccccCCCccceeeecCCCEEEEE
Confidence 46777753 211111111266788888643 34444444332211 00 01 112234568899999999999997
Q ss_pred EEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 508 VRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 508 ~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
+... +.|| |+||||+..|++.||++.|.|
T Consensus 123 f~~~-------------~~pGty~YhCh~~~H~~~GM~G~iiV 152 (153)
T d1e30a_ 123 FTWH-------------PTAGTYYYVCQIPGHAATGQFGKIVV 152 (153)
T ss_dssp EEEC-------------CCSEEEEEECCSTTTTTTTCEEEEEE
T ss_pred EEeC-------------CCCeEEEEeCCchhHHHCCCEEEEEE
Confidence 7643 1568 999999999999999999987
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.64 E-value=9.4e-08 Score=85.62 Aligned_cols=102 Identities=21% Similarity=0.177 Sum_probs=72.8
Q ss_pred cEEEeecCCCCCCCCCcE----EEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCC
Q 008840 85 PVFAFGTSSLTASVPGPT----IEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDG 159 (551)
Q Consensus 85 ~~~~y~~~~~ng~~PGPt----i~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG 159 (551)
+.+.|| |.+.++| |+++.||+|+|-..|. .. .++.|.||.+..-- -+|
T Consensus 51 t~vvFN-----G~v~altg~~~l~akvGErV~i~~~~~-n~---------------------~s~fHliG~hFD~V~~~G 103 (173)
T d2bw4a2 51 THIVFN-----GAVGALTGDHALTAAVGERVLVVHSQA-NR---------------------DTRPHLIGGHGDYVWATG 103 (173)
T ss_dssp SEEEET-----TSTTTTSGGGCEEEETTCEEEEEEEES-SS---------------------CBCEEEETCCEEEEETTC
T ss_pred CEEEEC-----CCccccccccCcccccCCeEEEEecCC-CC---------------------CccceeccceeEEECCCC
Confidence 456776 9999997 9999999987754442 22 68999999985321 233
Q ss_pred CC----CcceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 160 YA----KSWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 160 ~p----~~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
.. ........|.||+.. ..+|+.+ +||+|-||||.. . .....||.|.|.|+++.
T Consensus 104 ~~~~~p~~~~qTv~VppG~a~---~ve~~f~-~PG~y~~v~H~l--~-ea~~~G~~g~l~V~G~~ 161 (173)
T d2bw4a2 104 KFRNPPDLDQETWLIPGGTAG---AAFYTFR-QPGVYAYVNHNL--I-EAFELGAAGHFKVTGEW 161 (173)
T ss_dssp CTTSCCEEEESCCCBCTTEEE---EEEEECC-SCEEEEEEESSH--H-HHHTTSCEEEEEEESCC
T ss_pred cccCCCcCCceeEEccCCccE---EEEEEec-CceEEEEEechH--H-HHHhCCCEEEEEEcCCC
Confidence 22 111112257889887 8888886 899999999972 2 23568999999999765
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.61 E-value=1e-07 Score=82.97 Aligned_cols=91 Identities=15% Similarity=0.131 Sum_probs=60.8
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCC--------------CCCCCCC---C
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDE--------------PESDGYA---K 162 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~--------------~~~DG~p---~ 162 (551)
-.+|+|++|++|++.|.|.-... .+++++....... ..+.-.| +
T Consensus 31 p~~i~v~aG~~V~~~~~N~~~~~-------------------~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 91 (139)
T d1qhqa_ 31 QTSLSLPANTVVRLDFVNQNNLG-------------------VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPN 91 (139)
T ss_dssp CSEEEEETTCEEEEEEEECCSSC-------------------CCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTT
T ss_pred CCeEEECCCCEEEEEEeCCcccc-------------------eeEEEeecccchhhHHHHHHhhhccchhccccCCCccc
Confidence 46999999999999999974321 1455544322100 0011111 1
Q ss_pred cceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 163 SWFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 163 ~~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.......+.||++. ++.|+.+ .+|+||||||..| |..+||.|.|+|.
T Consensus 92 v~~~t~~~~pg~s~---~i~f~~~-~~G~y~f~Ct~pg----H~~~GM~G~i~V~ 138 (139)
T d1qhqa_ 92 ALAWTAMLNAGESG---SVTFRTP-APGTYLYICTFPG----HYLAGMKGTLTVT 138 (139)
T ss_dssp EEEECCCBCTTEEE---EEEEECC-SSEEEEEECCSTT----TTTTTCEEEEEEE
T ss_pred ccccccccCCcceE---EEEEecC-CCeEEEEEcCCcC----cccccCeEEEEEc
Confidence 11111247899988 9999997 8999999999865 5668999999997
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.48 E-value=1.5e-07 Score=84.27 Aligned_cols=145 Identities=14% Similarity=0.024 Sum_probs=98.5
Q ss_pred CcCceeEEEEEeeec--CCCceE-ecCCCCCCCCCCCCCCccCCceEEECCcccC-----ceeecC-eEEEEEEEecCCC
Q 008840 231 DVFDRPLFVFDRNFL--TNGSIY-MNSTGNNPSIHPQWQPEYFGDVIVVNGKAWP-----RMTVRR-RKYRFRIINASNA 301 (551)
Q Consensus 231 ~~~e~~lvl~d~~~~--~~g~~~-~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P-----~~~v~~-~~~RlRllNas~~ 301 (551)
+|+++.+.-||++.- ++|+.. |...+.........+.+..++++++||+... -++++. +++| |+|++.+
T Consensus 7 yD~~yyv~e~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~m~~~~P~~vvFNG~~galt~~~~l~akvGe~Vr--i~~~~~N 84 (177)
T d1oe1a2 7 YDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALTGANALTAKVGETVL--LIHSQAN 84 (177)
T ss_dssp CSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEE--EEEEESS
T ss_pred cceEEEecccEeecCCCCCCCccccCChhhcchhHHHHHhccCCcEEEECCccccccCCCCcccccCCeEE--EEecCCC
Confidence 589999999999863 344421 1111100000000001235789999999754 366766 7775 4688888
Q ss_pred ceEEEEEcCCceEEEEEcCCCCCCCceE-ecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEE
Q 008840 302 RFFRFFFTNGLRFIHVGSDSAYLGKPVV-TNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMK 380 (551)
Q Consensus 302 ~~~~l~l~~g~~~~via~DG~~l~~P~~-~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~ 380 (551)
+..++|| .|..|..+..+|.+...|.. ++++.|.||++.-+.++|+++ +.|.+.+..-... ...+.+-.
T Consensus 85 ~~ssfHl-IG~hfD~V~~~G~~~n~p~~~~qT~~V~pG~~~~v~~tf~~P--G~Y~fV~H~L~ea-------~~~Ga~g~ 154 (177)
T d1oe1a2 85 RDTRPHL-IGGHGDWVWETGKFANPPQRDLETWFIRGGSAGAALYTFKQP--GVYAYLNHNLIEA-------FELGAAGH 154 (177)
T ss_dssp SCBCEEE-TTCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCSC--EEEEEEESSHHHH-------HTTSCEEE
T ss_pred CCcccee-cccccceEccCCeeCCCCCcCceeEEecCCccEEEEEEecCc--eEEEEEecHHHHH-------HhcCCeEE
Confidence 8889999 59999999999999877765 799999999999999999875 3899988631100 01345667
Q ss_pred EEEccCC
Q 008840 381 FIILKNR 387 (551)
Q Consensus 381 f~v~~~~ 387 (551)
|.|.+..
T Consensus 155 l~V~G~~ 161 (177)
T d1oe1a2 155 IKVEGKW 161 (177)
T ss_dssp EEEESCC
T ss_pred EEecCCC
Confidence 8887654
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.40 E-value=3e-07 Score=83.49 Aligned_cols=86 Identities=13% Similarity=0.281 Sum_probs=64.7
Q ss_pred ceEEECCccc----CceeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCCCC--CceEecEEEEccCceEEEE
Q 008840 272 DVIVVNGKAW----PRMTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAYLG--KPVVTNDTVLAPAEIADVV 344 (551)
Q Consensus 272 d~~lVNG~~~----P~~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~l~--~P~~~~~l~l~pgeR~dVl 344 (551)
+.++|||+.+ |.++++. +++||||+|.+..-...+|| ||+.|+|++.+|+..+ .+...|++.+.|+ +..|+
T Consensus 71 ~~~tING~~f~~~~p~~~~~~G~~erw~i~N~~~~~~HP~Hl-HG~~F~Vl~~~g~~~~~~~~~~kDTv~v~~~-~~~v~ 148 (181)
T d1kv7a3 71 HANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHI-HGTQFRILSENGKPPAAHRAGWKDTVKVEGN-VSEVL 148 (181)
T ss_dssp GCEEETTBCCCTTCCSEECCSSSCEEEEEECTTCCCCEEEEE-TTCCBEEEEBTTBCCCGGGSSSBSEEEESSS-EEEEE
T ss_pred cceeECCEecCCCCCceEeCCCCEEEEEEEeCCCCCccCceE-eceEEEEEecccCCccccCCcceeEEEeCCC-ceEEE
Confidence 5789999987 3577877 89999999999765567777 8999999999999874 2445799999665 44667
Q ss_pred EEcCCCC--CceEEEec
Q 008840 345 IDFSEST--SDVAILAN 359 (551)
Q Consensus 345 v~~~~~~--g~~~~L~~ 359 (551)
|.|.... .+.|.+..
T Consensus 149 v~f~~~~~~~G~w~fHC 165 (181)
T d1kv7a3 149 VKFNHDAPKEHAYMAHC 165 (181)
T ss_dssp ECCCSCCCGGGCEEEEE
T ss_pred EEEEeeCCCCCeEEEeC
Confidence 7776432 13565554
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=98.33 E-value=1.2e-06 Score=75.02 Aligned_cols=43 Identities=21% Similarity=0.314 Sum_probs=36.0
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+...|.||++.+..+..+ ++| |+||||...|...||++.|.|
T Consensus 78 ~~~~~I~PG~s~~y~f~a~--------------~~Gt~~YH~H~~~h~~~Gm~G~~iV 121 (129)
T d1aoza1 78 ISQCAINPGETFFYNFTVD--------------NPGTFFYHGHLGMQRSAGLYGSLIV 121 (129)
T ss_dssp TTBCCBCTTCEEEEEEECC--------------SCEEEEEEECSTTTGGGTCEEEEEE
T ss_pred cccceECCCCEEEEEEECC--------------CCCceEEecCCHHHHhCCCEEEEEE
Confidence 3445689999999866654 568 999999999999999999987
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=98.26 E-value=3.3e-07 Score=75.58 Aligned_cols=88 Identities=14% Similarity=0.138 Sum_probs=58.7
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCCCcceeccccCCCCCcc
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYAKSWFTAGFEEKGPTWT 177 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p~~~~t~~~i~pG~~~~ 177 (551)
--.+|++++||+|+ |.|.-.. ++++++........ ..+.+........+.||+++
T Consensus 17 ~P~~l~v~~GdtV~--f~n~~~~---------------------~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 72 (105)
T d2q5ba1 17 EPANVTVHPGDTVK--WVNNKLP---------------------PHNILFDDKQVPGASKELADKLSHSQLMFSPGESY- 72 (105)
T ss_dssp ESSEEEECTTEEEE--EEECSSC---------------------CEEEEECGGGSGGGCHHHHHHHCEEEEECSTTCEE-
T ss_pred eCCEEEECCCCEEE--EEECCCC---------------------CceeEeecCcccccccccCCccccccccccCCceE-
Confidence 35689999999754 6776443 56666554332211 11111112233457899988
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.+.|.....+|+|||+|..| ..+||.|.|+|+.
T Consensus 73 --~~~f~~~~~~G~y~y~C~~H------~~~GM~G~I~Veg 105 (105)
T d2q5ba1 73 --EITFSSDFPAGTYTYYCAPH------RGAGMVGKITVEG 105 (105)
T ss_dssp --EEEECTTSCSEEEEEECSTT------GGGTCEEEEEECC
T ss_pred --EEEEEeccCCceEEEEeCCC------CCCCCEEEEEEcC
Confidence 88888767899999999764 4589999999973
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=98.24 E-value=1.2e-06 Score=77.27 Aligned_cols=38 Identities=29% Similarity=0.558 Sum_probs=32.3
Q ss_pred eCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeec---cccccccCcccceEE
Q 008840 498 ITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCH---ILDHEDNIMMRPLKL 549 (551)
Q Consensus 498 v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCH---iL~HED~GMM~~~~V 549 (551)
+.||++.+..++++ ++| |+|||| ..+|.+.||++.+.|
T Consensus 101 i~PG~t~~y~f~a~--------------~~Gt~~YH~H~~~~~~h~~~Gm~G~liV 142 (151)
T d1kbva1 101 TAPGRTSTFSFKAL--------------QPGLYIYHCAVAPVGMHIANGMYGLILV 142 (151)
T ss_dssp BCTTEEEEEEEECC--------------SCEEEEEECCCSSHHHHHHTTCEEEEEE
T ss_pred eCCCCEEEEEEeCC--------------CCeEEEEECCCCChHHHHhCCCEEEEEE
Confidence 68999999977665 568 999999 457999999999877
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.22 E-value=1.1e-06 Score=71.40 Aligned_cols=82 Identities=17% Similarity=0.129 Sum_probs=51.7
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-.+|++++||+| +|.|.-.. +++++.+........++... .... ...++..
T Consensus 17 P~~i~v~~GdtV--~f~n~~~~---------------------~h~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~--- 67 (98)
T d2plta_ 17 PKTLTIKSGETV--NFVNNAGF---------------------PHNIVFDEDAIPSGVNADAI-SRDD--YLNAPGE--- 67 (98)
T ss_dssp SSEEEECTTCEE--EEEECSSC---------------------CEEEEECGGGSCTTCCHHHH-CEEE--EECSTTC---
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------ceeEEEecCCccccccCCcc-cccc--cccCCCc---
Confidence 479999999975 56776554 56776665443322111110 1111 2233333
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|+|+.+ .+|+|||+|.. |..+||.|.|+||
T Consensus 68 t~~~tf~-~~G~y~y~C~~------H~~~GM~G~I~Ve 98 (98)
T d2plta_ 68 TYSVKLT-AAGEYGYYCEP------HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEEECC-SCEEEEEECGG------GGGGTCEEEEEEC
T ss_pred eEEEEec-CCceEEEEeCc------CCCCCCEEEEEEC
Confidence 5666664 89999999975 3458999999996
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.15 E-value=1.8e-06 Score=76.16 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=33.4
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeec-----cccccccCcccceEE
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCH-----ILDHEDNIMMRPLKL 549 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCH-----iL~HED~GMM~~~~V 549 (551)
.|.||++.+..++++ ++| |+|||| +.+|...||++.|.|
T Consensus 104 ~i~PG~t~ty~f~a~--------------~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV 148 (153)
T d1mzya1 104 LINPGEKVVLRFKAT--------------RAGAFVYHCAPGGPMIPWHVVSGMAGCIMV 148 (153)
T ss_dssp CBCTTEEEEEEEECC--------------SCEEEEEECCCSTTHHHHHHHTTCEEEEEE
T ss_pred cccCCCEEEEEEEcC--------------CCceEEEEeCCcccccHhHHhCCCEEEEEE
Confidence 478999999977765 568 999999 567999999999987
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.11 E-value=9.2e-07 Score=78.44 Aligned_cols=39 Identities=28% Similarity=0.588 Sum_probs=33.7
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeec----cccccccCcccceEE
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCH----ILDHEDNIMMRPLKL 549 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCH----iL~HED~GMM~~~~V 549 (551)
.|.||++.++.++.+ +|| |+|||| +.+|...||.+.|.|
T Consensus 106 ~i~PGet~ty~f~a~--------------~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV 149 (157)
T d2bw4a1 106 QVNPGEETTLRFKAT--------------KPGVFVYHCAPEGMVPWHVTSGMNGAIMV 149 (157)
T ss_dssp CBCTTEEEEEEEECC--------------SCEEEEEECCCTTCHHHHHHTTCEEEEEE
T ss_pred eECcCCEEeEEEECC--------------CCccceEEECCCCchHHHHhCCCEEEEEE
Confidence 378999999977765 578 999999 678999999999987
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.08 E-value=6.8e-07 Score=77.62 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=42.4
Q ss_pred CCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 489 EQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 489 e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
+..-.+|..+.||++.+|.++|. .|| |.||||+..|.+.||++.|.|.
T Consensus 90 ~~v~~~t~~~~pg~s~~i~f~~~--------------~~G~y~f~Ct~pgH~~~GM~G~i~V~ 138 (139)
T d1qhqa_ 90 PNALAWTAMLNAGESGSVTFRTP--------------APGTYLYICTFPGHYLAGMKGTLTVT 138 (139)
T ss_dssp TTEEEECCCBCTTEEEEEEEECC--------------SSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ccccccccccCCcceEEEEEecC--------------CCeEEEEEcCCcCcccccCeEEEEEc
Confidence 34567889999999999988887 567 9999999999999999999985
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=98.07 E-value=1.6e-06 Score=70.62 Aligned_cols=82 Identities=18% Similarity=0.248 Sum_probs=51.1
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcce
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~ 178 (551)
=-++|++++||+|+ |.|.-.. ++++.......... .............+|++|
T Consensus 17 ~P~~i~v~~GdtV~--~~n~~~~---------------------~H~~~~~~~~~~~~--~~~~~~~~~~~~~~g~t~-- 69 (98)
T d1pcsa_ 17 EPSTVTIKAGEEVK--WVNNKLS---------------------PHNIVFDADGVPAD--TAAKLSHKGLLFAAGESF-- 69 (98)
T ss_dssp ESSEEEECTTCEEE--EEECSSC---------------------CEEEEECCSSSCHH--HHHHHCEEEEECSTTCEE--
T ss_pred eCCEEEECCCCEEE--EeECCCC---------------------ccceEEeccccCCC--ccccccccccccCCCcEE--
Confidence 36799999999755 5565433 56666553322111 111111222235678766
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.| + .+|+|+|||..| ...||.|.|+|+
T Consensus 70 -~~tf--~-~~G~y~Y~C~~H------~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 70 -TSTF--T-EPGTYTYYCEPH------RGAGMVGKVVVE 98 (98)
T ss_dssp -EEEC--C-SCEEEEEECGGG------TTTTCEEEEEEC
T ss_pred -EEec--c-CCceEEEEeccC------CCCCCEEEEEEC
Confidence 6655 3 799999999653 458999999996
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=98.02 E-value=1.3e-06 Score=71.48 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=25.6
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|+|+.+ .+|+|||+|..| ..+||.|.|+|+
T Consensus 72 ~~~~~f~-~~G~y~Y~C~~H------~~~GM~G~I~Ve 102 (102)
T d1kdja_ 72 SFKAKVS-TPGTYTFYCTPH------KSANMKGTLTVK 102 (102)
T ss_dssp EEEECCC-SCEEEEEECSTT------GGGTCEEEEEEC
T ss_pred EEEEeeC-CCceEEEEecCC------cccCCeEEEEEC
Confidence 5666665 899999999864 468999999996
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.01 E-value=8.3e-06 Score=72.20 Aligned_cols=38 Identities=26% Similarity=0.489 Sum_probs=32.7
Q ss_pred eCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeec----cccccccCcccceEE
Q 008840 498 ITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCH----ILDHEDNIMMRPLKL 549 (551)
Q Consensus 498 v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCH----iL~HED~GMM~~~~V 549 (551)
|.||++.++.++++ .+| |+|||| +.+|...||++.|.|
T Consensus 108 I~PG~t~ty~f~a~--------------~~Gt~~yH~H~~~~~~~q~~~Gl~G~liV 150 (159)
T d1oe2a1 108 VNPGEQATLRFKAD--------------RSGTFVYHCAPEGMVPWHVVSGMSGTLMV 150 (159)
T ss_dssp BCTTEEEEEEEECC--------------SCEEEEEECCCTTCHHHHHHTTCEEEEEE
T ss_pred CCCCCeEEEEEEcC--------------CCceEEEEeCCCCCchhHHhCCCEEEEEE
Confidence 78999999977665 567 999999 678999999999877
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.99 E-value=4.4e-06 Score=74.35 Aligned_cols=44 Identities=16% Similarity=0.107 Sum_probs=35.9
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.....+++|++....+..+ .+| |+||||+..|...||++.|.|-
T Consensus 112 ~~~~i~~pg~~~~y~f~~~--------------~~Gt~wYH~H~~~q~~~Gl~G~~iV~ 156 (162)
T d2q9oa1 112 TECPIPPKGGQRTYRWRAR--------------QYGTSWYHSHFSAQYGNGVVGTIQIN 156 (162)
T ss_dssp TBCCBCTTTEEEEEEEECC--------------SCEEEEEEECSTTGGGGTCEEEEEEE
T ss_pred ccceecCCCCEEEeeecCC--------------CCEEEEeecCCHHHHhCCCEEEEEEC
Confidence 3445578899988866655 457 9999999999999999999873
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.97 E-value=3.4e-06 Score=74.61 Aligned_cols=145 Identities=10% Similarity=0.005 Sum_probs=99.2
Q ss_pred CcCceeEEEEEeeec--CCCceE-ecCCCCCCCCCCCCCCccCCceEEECCcccCc-----eeecC-eEEEEEEEecCCC
Q 008840 231 DVFDRPLFVFDRNFL--TNGSIY-MNSTGNNPSIHPQWQPEYFGDVIVVNGKAWPR-----MTVRR-RKYRFRIINASNA 301 (551)
Q Consensus 231 ~~~e~~lvl~d~~~~--~~g~~~-~~~~g~~~~~~~~~~~~~~gd~~lVNG~~~P~-----~~v~~-~~~RlRllNas~~ 301 (551)
+|+|+.++-||++.- ++|... |...+.........+.+..++.+++||+.... ++.+. +++ ||+|++.+
T Consensus 11 yDr~yYvge~dfY~p~d~~G~~k~y~~~~~~~~d~~e~m~~l~PthVVFNG~vgaltg~~aL~AkvGEtV--~~~~~gpN 88 (178)
T d1mzya2 11 YDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGALTGEGALKAKVGDNV--LFVHSQPN 88 (178)
T ss_dssp CSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHHTTTCCSEEEETTSTTTTSGGGCEEEETTCEE--EEEEEESS
T ss_pred cCeEEEEecceeecCCCCCCCccccCChhhcchhHHHHHHccCCCEEEECCccCcccCCCCcccccCCeE--EEecccCC
Confidence 589999999999763 344321 11000000000000112347899999997643 56665 776 67999999
Q ss_pred ceEEEEEcCCceEEEEEcCCCCCCCce-EecEEEEccCceEEEEEEcCCCCCceEEEecCCCCCCCCCCCCCCCCCceEE
Q 008840 302 RFFRFFFTNGLRFIHVGSDSAYLGKPV-VTNDTVLAPAEIADVVIDFSESTSDVAILANDAPYPYPAGNPVNDANGKVMK 380 (551)
Q Consensus 302 ~~~~l~l~~g~~~~via~DG~~l~~P~-~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~~~~~~~~g~~~~~~~~~vm~ 380 (551)
+..++|+. |..|.-+-.+|.+...|. .++++.|++|+..-+.++|.++ +.|.+.|..-... ...+.+..
T Consensus 89 ~~SsfHvI-Gg~~D~V~~~G~~~n~p~~~~qT~~v~~G~a~~~~~tf~~P--G~Y~~VdH~l~~A-------~~kGA~g~ 158 (178)
T d1mzya2 89 RDSRPHLI-GGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFLQP--GVYAYVNHNLIEA-------VHKGATAH 158 (178)
T ss_dssp SCBCEEEE-TCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCSC--EEEEEEESSHHHH-------HTTCCEEE
T ss_pred CCCCcccc-cCccceEccCCccCCCCCCCceEEEecCCceeEEEEEeCCC--eEEEEEccHHHHH-------HhCCCeEE
Confidence 99999998 889998889999987775 4799999999999999999986 3999998741100 01235777
Q ss_pred EEEccCC
Q 008840 381 FIILKNR 387 (551)
Q Consensus 381 f~v~~~~ 387 (551)
|.|.+..
T Consensus 159 l~V~G~~ 165 (178)
T d1mzya2 159 VLVEGEW 165 (178)
T ss_dssp EEEESCC
T ss_pred EEeCCCC
Confidence 8887653
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=97.94 E-value=1.1e-05 Score=64.41 Aligned_cols=74 Identities=23% Similarity=0.305 Sum_probs=50.4
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-+.|++++||+| +|.|.-.. .+++...+. +..........||+++
T Consensus 18 P~~i~I~~GdtV--~f~n~d~~---------------------~h~~~~~~~---------~~~~~~~~~~~~g~~~--- 62 (91)
T d1bxua_ 18 PSTIEIQAGDTV--QWVNNKLA---------------------PHNVVVEGQ---------PELSHKDLAFSPGETF--- 62 (91)
T ss_dssp SSEEEECTTCEE--EEEECSSC---------------------CEEEEETTC---------GGGCEEEEECSTTCEE---
T ss_pred CCEEEECCCCEE--EEEECCcC---------------------CceEEeccc---------ccccccccccCCCCCE---
Confidence 589999999965 57786544 455554332 2111222346688866
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.| + .+|+|.|+|..| ..+||.|.|+|+
T Consensus 63 ~~tF--~-~~G~y~Y~C~~H------~~~gM~G~I~Ve 91 (91)
T d1bxua_ 63 EATF--S-EPGTYTYYCEPH------RGAGMVGKIVVQ 91 (91)
T ss_dssp EEEC--C-SCEEEEEECTTT------GGGTCEEEEEEC
T ss_pred EEEe--c-cCceEEEEeCCC------CCCCCEEEEEEC
Confidence 5555 3 799999999775 357999999996
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=97.88 E-value=8e-06 Score=66.90 Aligned_cols=86 Identities=13% Similarity=0.128 Sum_probs=53.9
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCCCcceeccccCCCCCcce
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYAKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p~~~~t~~~i~pG~~~~~ 178 (551)
-.+|++++||+|+ |.|.-.. .++..+........ .+..+..........|++++
T Consensus 18 P~~i~v~~GdtV~--f~n~~~~---------------------~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 72 (105)
T d2cj3a1 18 PAKLTIKPGDTVE--FLNNKVP---------------------PHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQST-- 72 (105)
T ss_dssp SSEEEECTTCEEE--EEECSSC---------------------CEEEEECSSSSTTCCHHHHHHHCEEEEECSTTCEE--
T ss_pred CCEEEECCCCEEE--EEECCCC---------------------ceeeEeccCCCCccccccCCcccccccccCCCcce--
Confidence 3599999999755 6676443 35544443222111 00000101122235678877
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.|.....+|+|||+|-.| ..+||.|.|+|+
T Consensus 73 -~~~f~~~~~~G~y~y~C~~H------~~~GM~G~I~V~ 104 (105)
T d2cj3a1 73 -STTFPADAPAGEYTFYCEPH------RGAGMVGKITVA 104 (105)
T ss_dssp -EEECCTTCCSEEEEEECTTT------GGGTCEEEEEEC
T ss_pred -EEEEEeccCCceEEEEeCCC------cCCCcEEEEEEe
Confidence 88888766899999999653 568999999997
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=97.85 E-value=2.4e-05 Score=64.15 Aligned_cols=74 Identities=20% Similarity=0.362 Sum_probs=51.4
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCccee
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNE 179 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~ 179 (551)
-++|.+++||+| +|+|+-.. ++++++..... | ...+..+.+.+|++|
T Consensus 32 P~~i~V~~GdtV--~f~N~d~~---------------------~H~v~~~~~~~-----~--~~~~~~~~~~~g~~~--- 78 (105)
T d2ov0a1 32 TPELHVKVGDTV--TWINREAM---------------------PHNVHFVAGVL-----G--EAALKGPMMKKEQAY--- 78 (105)
T ss_dssp SSEEEECTTCEE--EEEECSSS---------------------CBCCEECTTTS-----S--SSCEECCCBCTTEEE---
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------ceeEEEecccC-----C--cccccccccCCCceE---
Confidence 579999999986 56787443 56666543211 1 112444456788877
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.| + .+|+|.|+|-.| .||.|.|+|+
T Consensus 79 ~~tf--~-~pG~y~y~C~~H--------~~M~G~I~Ve 105 (105)
T d2ov0a1 79 SLTF--T-EAGTYDYHCTPH--------PFMRGKVVVE 105 (105)
T ss_dssp EEEE--C-SCEEEEEECSSC--------TTCEEEEEEC
T ss_pred EEEe--c-CCeEEEEEecCC--------CCCEEEEEEC
Confidence 7777 3 789999999876 3899999985
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=97.84 E-value=3.2e-05 Score=67.98 Aligned_cols=86 Identities=13% Similarity=0.168 Sum_probs=63.9
Q ss_pred ceEEECCcccC--c-eeecC-eEEEEEEEecCCCceEEEEEcCCceEEEEEcCCCC----------------C----CCc
Q 008840 272 DVIVVNGKAWP--R-MTVRR-RKYRFRIINASNARFFRFFFTNGLRFIHVGSDSAY----------------L----GKP 327 (551)
Q Consensus 272 d~~lVNG~~~P--~-~~v~~-~~~RlRllNas~~~~~~l~l~~g~~~~via~DG~~----------------l----~~P 327 (551)
..++|||+.|. . ..++. .+.+|+|+|.+.. ...+|| ||+.|+||+.+|.. . ..+
T Consensus 28 ~~~~ing~~~~~~~~~~~~~G~~e~W~i~N~~~~-~HP~Hi-Hg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (154)
T d1gska3 28 PVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRG-THPIHL-HLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEK 105 (154)
T ss_dssp EEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSS-CEEEEE-SSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGS
T ss_pred ceEEECCcCcCCCcccccCCCCEEEEEEEeCCCC-CCCEEE-CCceEEEEEecCCCcccccccccccccCCCcCCCcccC
Confidence 36899999984 2 23444 7999999998854 356677 89999999876531 1 112
Q ss_pred eEecEEEEccCceEEEEEEcCCCCCceEEEecC
Q 008840 328 VVTNDTVLAPAEIADVVIDFSESTSDVAILAND 360 (551)
Q Consensus 328 ~~~~~l~l~pgeR~dVlv~~~~~~g~~~~L~~~ 360 (551)
...|++.+.||+.+.|.+.+...+| .|.+...
T Consensus 106 ~~kDTv~v~pg~~~~i~~~~~d~pG-~w~~HCH 137 (154)
T d1gska3 106 GWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCH 137 (154)
T ss_dssp SCBSEEEECTTEEEEEEEECCSCCE-EEEEEES
T ss_pred cccccEEeCCCCEEEEEEEeCCCCc-ceEEecC
Confidence 3479999999999999999877765 6766654
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=97.83 E-value=2.3e-05 Score=63.24 Aligned_cols=83 Identities=14% Similarity=0.046 Sum_probs=49.3
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcce
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~ 178 (551)
--.+|++++||+|+ |.|.-.. ++++...........+. ++.........++++
T Consensus 16 ~P~~i~i~~GdtV~--f~n~~~~---------------------~h~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--- 68 (98)
T d1iuza_ 16 VPSKISVAAGEAIE--FVNNAGF---------------------PHNIVFDEDAVPAGVDA-DAISYDDYLNSKGET--- 68 (98)
T ss_dssp ESSEEEECTTCEEE--EEECSSC---------------------CEEEEECTTSSCTTCCH-HHHCEEEEECSTTCE---
T ss_pred eCCEEEECCCCEEE--EEECCCC---------------------cccEEEeCCCccccccc-ccccccCcccCCCcE---
Confidence 35699999999765 6675443 45554443322221111 111111122345554
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
|.++.+ .+|+|||+|-.| ..+||.|.|+||
T Consensus 69 --~~~~f~-~~G~y~y~C~~H------~~~GM~G~I~Ve 98 (98)
T d1iuza_ 69 --VVRKLS-TPGVYGVYCEPH------AGAGMKMTITVQ 98 (98)
T ss_dssp --EEEECC-SCEEEEEECTTT------GGGTCEEEEEEC
T ss_pred --EEEecC-CCceEEEEeCCC------ccCCCeEEEEEC
Confidence 455554 799999999764 468999999996
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=97.82 E-value=1.7e-05 Score=64.26 Aligned_cols=82 Identities=12% Similarity=0.069 Sum_probs=47.6
Q ss_pred CcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCC-CCCcceeccccCCCCCcce
Q 008840 100 GPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDG-YAKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 100 GPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG-~p~~~~t~~~i~pG~~~~~ 178 (551)
-.+|++++||+| +|+|.-.. ++++.+.........+. .++.........++++|
T Consensus 16 P~~i~v~~GdtV--~f~n~~~~---------------------~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 70 (99)
T d1bypa_ 16 PSDLSIASGEKI--TFKNNAGF---------------------PHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEY-- 70 (99)
T ss_dssp SSEEEECTTEEE--EEEECSSC---------------------CBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEE--
T ss_pred CCEEEECCCCEE--EEEECCCC---------------------ceeEEEecCCCCCccccccCcccccccccCCCceE--
Confidence 569999999975 56776443 34444443332221110 00101111223455555
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEE
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYIL 216 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV 216 (551)
++.| + .+|+|||+|-. |..+||.|.|+|
T Consensus 71 -~~tf--~-~~G~y~y~C~~------H~~~GM~G~I~V 98 (99)
T d1bypa_ 71 -SVTL--T-EKGTYKFYCAP------HAGAGMVGKVTV 98 (99)
T ss_dssp -EEEE--C-SCEEEEEECGG------GTTTTCEEEEEE
T ss_pred -EEEe--c-CCceEEEEECc------CCCCCCEEEEEE
Confidence 4444 3 89999999965 345899999998
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=97.76 E-value=3.5e-05 Score=65.07 Aligned_cols=34 Identities=6% Similarity=0.054 Sum_probs=26.7
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+|+|+.+ .+|+|.|+|..| ..+||.|.|+|.|+.
T Consensus 63 ~~~~tF~-~~G~Y~Y~C~pH------~~~GM~G~I~Vgd~~ 96 (123)
T d1pmya_ 63 EAVVKFD-KEGVYGFKCAPH------YMMGMVALVVVGDKR 96 (123)
T ss_dssp CEEEECC-SCEEEEEECSTT------TTTTCEEEEEESSCC
T ss_pred ccccccC-CCceEEEEeccC------CCCCCEEEEEECCCC
Confidence 4455554 799999999875 458999999998654
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=97.76 E-value=4.7e-05 Score=69.82 Aligned_cols=92 Identities=20% Similarity=0.189 Sum_probs=64.0
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCCC-c---ceec--ccc
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYAK-S---WFTA--GFE 170 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p~-~---~~t~--~~i 170 (551)
..+.+|+++.|+.+++.+.|..... ++.+|+||.+..-. .+|.+. + .... -.+
T Consensus 67 ~~~~v~~~~~~~~~~~v~~~~~~~~--------------------~Hp~HlHg~~F~vl~~~g~~~~~~~~~~~rDtv~v 126 (200)
T d1hfua3 67 PAGSVYELPRNQVVELVVPAGVLGG--------------------PHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSL 126 (200)
T ss_dssp STTSEEEECSSCEEEEEEECCSTTC--------------------CCEEEETTCCEEEEECTTCCCCCCSSBCEESEEEC
T ss_pred ccCceEEecCCcceEEEEeeccccc--------------------cCceeecCCcEEEEeccCCCCCccccCcccceEEe
Confidence 3478999999999999999886542 79999999763211 222221 0 0000 024
Q ss_pred C-CCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 171 E-KGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 171 ~-pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
. +|+.. .++|.++ .+|.|.||||.. .|..+||...++++
T Consensus 127 ~~~G~~~---~ir~~ad-npG~w~~HCHi~----~H~~~GM~~~~~~~ 166 (200)
T d1hfua3 127 GVTGDEV---TIRFVTD-NPGPWFFHCHIE----FHLMNGLAIVFAED 166 (200)
T ss_dssp CSTTCEE---EEEEECC-SCEEEEEEESSH----HHHHTTCEEEEEEC
T ss_pred CCCCEEE---EEEEECC-CCeeeEEEeCCC----hHHhCCCcEEEEEc
Confidence 3 45555 7999996 899999999983 57889998777765
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=97.70 E-value=4.9e-05 Score=69.12 Aligned_cols=90 Identities=19% Similarity=0.160 Sum_probs=62.1
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCC-Ccceec-----cccC
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYA-KSWFTA-----GFEE 171 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p-~~~~t~-----~~i~ 171 (551)
.+..+.+..++.++|.+.|. . ++.+|+||.+..-. .+|.+ .....+ -.|.
T Consensus 70 ~~~~~~~~~~~~~~i~~~~~--~---------------------~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~rDTv~v~ 126 (190)
T d1v10a3 70 GGAVISLPANQVIEISIPGG--G---------------------NHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIG 126 (190)
T ss_dssp TTTEEEECTTCEEEEEEECC--B---------------------SCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECC
T ss_pred cceeEEccCccEEEEEeccC--c---------------------cccccccCceEEEEEcCCCcccccccCcccCEEEeC
Confidence 36679999999999998884 2 58899999864211 12221 110000 0255
Q ss_pred CCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 172 KGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 172 pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
||+++ ..++|.++ .+|.|.||||.. .|..+||...|++..
T Consensus 127 ~~g~~--~~irf~ad-npG~w~~HCHi~----~H~~~GM~~~~~~~~ 166 (190)
T d1v10a3 127 GGGDN--VTFRFVTD-NPGPWFLHCHID----WHLEAGLAVVFAEDI 166 (190)
T ss_dssp BSSCE--EEEEEECC-SCEEEEEEESCH----HHHTTTCEEEEEESG
T ss_pred CCeEE--EEEEEEcC-CCeeEEEecCch----hhhhCCCcEEEEECC
Confidence 66544 26899996 899999999973 588999999998763
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=97.69 E-value=2.8e-05 Score=63.04 Aligned_cols=84 Identities=13% Similarity=0.100 Sum_probs=49.8
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCC-CCcceeccccCCCCCcc
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGY-AKSWFTAGFEEKGPTWT 177 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~-p~~~~t~~~i~pG~~~~ 177 (551)
--.+|++++||+| +|+|.-.. ++++.+.....+...+.. +..........||++|
T Consensus 15 ~P~~iti~~GdtV--~f~n~~~~---------------------~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~- 70 (99)
T d1plca_ 15 VPSEFSISPGEKI--VFKNNAGF---------------------PHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETF- 70 (99)
T ss_dssp ESSEEEECTTCEE--EEEECSSC---------------------CBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEE-
T ss_pred eCCEEEECCCCEE--EEEECCCC---------------------CccEEEccCcCCCccccccCcccccccccCCCceE-
Confidence 3569999999975 56786443 455554433222210000 0000011124578766
Q ss_pred eeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 178 NETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 178 ~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
++.| + .+|+|.|+|-. |..+||.|.|+|.
T Consensus 71 --~~tF--~-~~G~y~Y~C~p------H~~~GM~G~I~V~ 99 (99)
T d1plca_ 71 --EVAL--S-NKGEYSFYCSP------HQGAGMVGKVTVN 99 (99)
T ss_dssp --EEEC--C-SCEEEEEECGG------GTTTTCEEEEEEC
T ss_pred --EEec--C-CCceEEEEeCC------CcCCCcEEEEEEC
Confidence 6655 3 79999999954 4569999999983
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=97.64 E-value=5e-05 Score=61.09 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=24.7
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|+|+.+ .+|+|+|+|-.| ..+||.|.|+|+
T Consensus 67 ~~~~tf~-~~G~y~Y~C~~H------~~~GM~G~I~Ve 97 (97)
T d2jxma1 67 FYSVTLG-TPGTYSFYCTPH------RGAGMVGTITVE 97 (97)
T ss_dssp CEEEECC-SCSEEEEECSST------TTTTCEEEEEEC
T ss_pred EEEEecC-CCeEEEEEEccC------CCCCCEEEEEEC
Confidence 5566665 899999999664 347999999996
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=97.61 E-value=8e-05 Score=68.88 Aligned_cols=93 Identities=17% Similarity=-0.042 Sum_probs=62.7
Q ss_pred EEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCC--CCCCCCCCc----------cee--c
Q 008840 102 TIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDE--PESDGYAKS----------WFT--A 167 (551)
Q Consensus 102 ti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~--~~~DG~p~~----------~~t--~ 167 (551)
.++++.|+.|+|.+.|.-... ......+.+|+||.+.. ...+|.... ... -
T Consensus 80 v~~~~~g~~veivl~n~~~~~---------------~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDT 144 (214)
T d1aoza3 80 VYQFKIGEVVDVILQNANMMK---------------ENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNT 144 (214)
T ss_dssp CEEECTTCEEEEEEEECCCSS---------------TTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESE
T ss_pred eEEecCCCEEEEEEecccccc---------------CCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecC
Confidence 689999999999999963320 00112699999997631 111111100 000 0
Q ss_pred cccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 168 GFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 168 ~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
..+.||+.. +++|.++ .+|.|.||||.. .+...||...+++.
T Consensus 145 v~v~~g~~~---~ir~~ad-npG~w~~HCH~~----~H~~~GM~~~~~v~ 186 (214)
T d1aoza3 145 VVIFPYGWT---AIRFVAD-NPGVWAFHCHIE----PHLHMGMGVVFAEG 186 (214)
T ss_dssp EEECTTEEE---EEEEECC-SCEEEEEEESSH----HHHHTTCEEEEEEC
T ss_pred cccCCCceE---EEEEecC-CCeeEEEEECcH----HHHhCcCcEEEEEc
Confidence 136678776 9999997 899999999973 57889999888776
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=97.55 E-value=0.00023 Score=64.93 Aligned_cols=94 Identities=19% Similarity=0.223 Sum_probs=64.7
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCC--CCCCCCCCc--------ceec
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDE--PESDGYAKS--------WFTA 167 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~--~~~DG~p~~--------~~t~ 167 (551)
..|.++.+..++.+++.+.|.-.. ...++.+|+||.+.. ...+|.+.+ .+.-
T Consensus 67 ~~~~v~~~~~~~~~eiv~~~~~~~------------------~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~ 128 (199)
T d1gyca3 67 PAGSVYPLPAHSTIEITLPATALA------------------PGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVST 128 (199)
T ss_dssp STTSEEEECTTCEEEEEEECCTTS------------------CSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEEC
T ss_pred ccCceEEeccCceeEEEeeccccc------------------CCCceeeeecCCcEEEEeecCCCccCccCcccccceee
Confidence 347789999999999999886432 112699999998732 222232211 1111
Q ss_pred cccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 168 GFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 168 ~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
..+.+|+.. .++|.++ .+|.|.||||.. .|...||...+++.
T Consensus 129 ~~~~~g~~~---~irf~ad-npG~w~~HCHi~----~H~~~GM~~~~~~~ 170 (199)
T d1gyca3 129 GTPAAGDNV---TIRFQTD-NPGPWFLHCHID----FHLEAGFAIVFAED 170 (199)
T ss_dssp CCGGGTCEE---EEEEECC-SCEEEEEEESSH----HHHHTTCEEEEEET
T ss_pred eccCCCcEE---EEEEECC-CCeeEEEEcCch----hhHhccCcEEEEEc
Confidence 124677766 8999996 899999999983 57889999866443
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=97.54 E-value=0.00011 Score=61.50 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=25.5
Q ss_pred EEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 181 YHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 181 y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
|+++.+ .+|+|.|+|-.| ..+||.|.|+|.|+.
T Consensus 64 ~s~tF~-~~G~y~Y~CtpH------~~~GM~G~I~Vg~~~ 96 (120)
T d1paza_ 64 YVLTVT-QPGAYLVKCTPH------YAMGMIALIAVGDSP 96 (120)
T ss_dssp EEEECC-SCEEEEEECTTT------GGGTCEEEEEESSSC
T ss_pred EEEEec-CCCeEEEEEeeC------CCCCCEEEEEECCCC
Confidence 344444 789999999765 458999999998753
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=97.51 E-value=0.00012 Score=61.56 Aligned_cols=38 Identities=13% Similarity=0.195 Sum_probs=27.9
Q ss_pred CCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 171 EKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 171 ~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
.++.+| +|.| + .+|+|+|+|=. |..+||.|.|+|.++.
T Consensus 59 ~~~~~~---~~tF--~-~~G~Y~Y~C~p------H~~~GM~G~I~Vg~~~ 96 (123)
T d1adwa_ 59 KINESY---TLTV--T-EPGLYGVKCTP------HFGMGMVGLVQVGDAP 96 (123)
T ss_dssp CTTCCE---EEEE--C-SCEEEEEECGG------GGGGTCEEEEEESSSC
T ss_pred cCCcce---EEec--c-CCCeEEEEEcc------CCCCCCEEEEEECCCC
Confidence 455544 4444 3 79999999965 4568999999998653
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=97.47 E-value=0.00017 Score=60.69 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=25.4
Q ss_pred eEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCC
Q 008840 180 TYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHP 219 (551)
Q Consensus 180 ~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp 219 (551)
+|+|+.+ .+|+|.|+|..| ..+||.|.|+|.|+
T Consensus 63 ~~s~Tf~-~~G~Y~Y~C~pH------~~~GM~G~IvVgd~ 95 (124)
T d1bqka_ 63 NYKVTFT-APGVYGVKCTPH------YGMGMVGVVQVGDA 95 (124)
T ss_dssp CEEEECC-SCEEEEEECTTT------GGGTCEEEEEESSS
T ss_pred cEEEecC-CCceEEEEeccC------cCCCCEEEEEECCC
Confidence 3444444 799999999765 45899999999853
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=97.42 E-value=0.00024 Score=58.02 Aligned_cols=75 Identities=19% Similarity=0.257 Sum_probs=49.2
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcce
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTN 178 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~ 178 (551)
=-++|.+++||+| +|.|.-.. ++++....... +...+..+.+.+|++|
T Consensus 32 ~P~~i~V~~GdtV--~f~N~d~~---------------------~H~v~~~~~~~-------~~~~f~s~~~~~~~~~-- 79 (106)
T d1id2a_ 32 LTPEVTIKAGETV--YWVNGEVM---------------------PHNVAFKKGIV-------GEDAFRGEMMTKDQAY-- 79 (106)
T ss_dssp SSSEEEECTTCEE--EEEECSSS---------------------CBCCEECTTTS-------SSSCEECCCBCTTEEE--
T ss_pred eCCEEEECCCCEE--EEEECCCC---------------------ceeEEeccccC-------CcccccccccCCCceE--
Confidence 3579999999975 67886433 44443322111 1112444446677766
Q ss_pred eeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 179 ETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 179 ~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
+|.| + .+|+|.|+|-.| .||.|.|+|+
T Consensus 80 -~~tf--~-~~G~y~y~C~~H--------~~M~G~I~Ve 106 (106)
T d1id2a_ 80 -AITF--N-EAGSYDYFCTPH--------PFMRGKVIVE 106 (106)
T ss_dssp -EEEE--C-SCEEEEEECSSC--------TTCEEEEEEC
T ss_pred -EEec--C-CCeEEEEEccCC--------CCCEEEEEEC
Confidence 6666 3 799999999876 4899999985
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=97.40 E-value=0.00013 Score=62.79 Aligned_cols=93 Identities=12% Similarity=0.026 Sum_probs=54.0
Q ss_pred ceEEEcccccCCCCCCC-cceeeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEE
Q 008840 428 THLLINAKTLEDPVTET-PKTLDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRI 506 (551)
Q Consensus 428 ~~~~INg~~f~~~~~~~-~~~~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i 506 (551)
..|.+||+ +..+.... ........+.|.-...+.+|.|+- + +....+| . -. ..+.||++.+.
T Consensus 35 ~~~~~NG~-~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~--~--~~~~~dG--~--------~~--~~i~pg~~~~y 97 (140)
T d1kv7a1 35 TTWGYNGN-LLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGL--E--VPGEVDG--G--------PQ--GIIPPGGKRSV 97 (140)
T ss_dssp EEEEESSS-SBCCEEEEETTCEEEEEEEECSSSCBCCEEETC--C--CCGGGSC--C--------TT--CCBCTTCEEEE
T ss_pred EEEEECCc-cCCceEEEECCCEEEEEEEeCccccccEeeeee--e--cCCccCC--C--------cc--ceEccCCceeE
Confidence 46889985 43331111 111445567776555555555443 1 1111122 1 11 12789999988
Q ss_pred EEEEeccccCCCCCCCCCCCCc-eEEeecc----ccccccCcccceEEc
Q 008840 507 LVRFSYVHANASYPFDATAEPG-YVYHCHI----LDHEDNIMMRPLKLI 550 (551)
Q Consensus 507 ~~~f~~~~~~~~~p~~~~~~pg-~~~HCHi----L~HED~GMM~~~~V~ 550 (551)
.+.++. ..| |.||||. ..|...||++.|.|-
T Consensus 98 ~~~~~~-------------~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~ 133 (140)
T d1kv7a1 98 TLNVDQ-------------PAATCWFHPHQHGKTGRQVAMGLAGLVVIE 133 (140)
T ss_dssp EEECCS-------------CSEEEEEECCCTTTHHHHHHTTCCEEEEEE
T ss_pred EEEEec-------------CCeeEEEEECCCCChHHHHhCCCeEEEEEC
Confidence 766551 226 9999996 468889999999874
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00021 Score=64.86 Aligned_cols=94 Identities=15% Similarity=0.047 Sum_probs=56.2
Q ss_pred eeeEEEEeeeeeeeeeccccCceeeeeeeeccCCccCCCCcCCCcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCC
Q 008840 448 LDQTELVNLEEFKACMNKINDAIKCNLSKHACGKKQAVPVHEQGWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEP 527 (551)
Q Consensus 448 ~~~~~l~n~~~~~~~~~~~~~~~~~~v~~~~~G~~~~~~~~e~~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~p 527 (551)
.....+.|.....+.+|.|+. ++.- -..|. ..+.......+.+..|+||++.+..+... ...+..+-+ .+.
T Consensus 85 ~v~V~~~N~~~~p~siH~HG~--~~~~--~~~g~-~~~dg~~~~~~~~~~v~PG~t~tY~~~~~--~~~~p~~~d--~~~ 155 (192)
T d2j5wa1 85 KVYVHLKNLASRPYTFHSHGI--TYYK--EHEGA-IYPDNTTDFQRADDKVYPGEQYTYMLLAT--EEQSPGEGD--GNC 155 (192)
T ss_dssp EEEEEEEEESSSCBCCEESSS--BCCG--GGCCC-CSCCCCCGGGTGGGCBCTTCEEEEEEECC--STTSCCTTS--CSE
T ss_pred EEEEEEEeCCCCCcceeccCc--ccCC--ccccc-ccCCCCCCCCcccCcccCCCEEEEEEEcc--CccccccCC--CCC
Confidence 445677776655555555543 2111 01121 11111223457777899999999977776 333222222 255
Q ss_pred c-eEEeecc--ccccccCcccceEEc
Q 008840 528 G-YVYHCHI--LDHEDNIMMRPLKLI 550 (551)
Q Consensus 528 g-~~~HCHi--L~HED~GMM~~~~V~ 550 (551)
| |+||||. ..|...||++++.|-
T Consensus 156 gt~~YHsHv~~~~~~~~GL~G~lIV~ 181 (192)
T d2j5wa1 156 VTRIYHSHIDAPKDIASGLIGPLIIC 181 (192)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEE
T ss_pred ceEEEeCCCCcHHHHhCCCeEEEEEc
Confidence 7 9999997 458889999999884
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=97.15 E-value=0.00032 Score=57.81 Aligned_cols=42 Identities=14% Similarity=0.280 Sum_probs=33.2
Q ss_pred cEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEcC
Q 008840 495 VYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLIK 551 (551)
Q Consensus 495 TV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~~ 551 (551)
+..+.||++.++.++++ .+| |.||||+.-| ..||.+.|.|+.
T Consensus 70 ~~~~~pG~t~~~~f~~~--------------~~G~y~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 70 QEVIKAGETKTISFTAD--------------KAGAFTIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEECC--------------SCEEEEEBCSSSCT-TTBCCEEEEEEC
T ss_pred ccccCCcceEEEEEEec--------------cceEEEEECcccCh-hhcCeEEEEEEC
Confidence 34578999999977776 568 9999998545 467999999863
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=97.05 E-value=0.00062 Score=57.51 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=34.1
Q ss_pred ccCCCCCcceeeEEEEcC--ccCceeEEeccCCCchhhhhhccceEEEEEeC
Q 008840 169 FEEKGPTWTNETYHYHNM--QQPGNTWYHDHTMGLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~--~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~d 218 (551)
.+.||++. +..|++. ..+|+|.|=|=.-| | ++||.|.|+|++
T Consensus 86 ~l~pGe~~---~i~f~~p~~~~~G~Y~f~Ct~PG----H-~~gM~G~l~V~~ 129 (129)
T d1cuoa_ 86 IIGGGEKT---SVKFKVSALSKDEAYTYFCSYPG----H-FSMMRGTLKLEE 129 (129)
T ss_dssp CBCTTCEE---EEEEEGGGCCTTSCEEEECCSTT----C-TTTSEEEEEEEC
T ss_pred ccCccccc---eEEEEccccCCCceEEEEeCCCC----c-ccCcEEEEEEeC
Confidence 58899998 8888774 25999999997655 3 479999999983
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=97.05 E-value=0.00092 Score=56.45 Aligned_cols=41 Identities=17% Similarity=0.083 Sum_probs=33.7
Q ss_pred ccCCCCCcceeeEEEEcC--ccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 169 FEEKGPTWTNETYHYHNM--QQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~--~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.+.||++. +..|++. .++|+|+|=|=.-| | ++||.|.|.|.
T Consensus 86 ~l~pget~---~i~f~~p~~~~~G~Y~f~Ct~PG----H-~~gM~G~l~V~ 128 (129)
T d2ccwa1 86 VIGGGESD---SVTFDVSKIAAGENYAYFCSFPG----H-WAMMKGTLKLG 128 (129)
T ss_dssp CBCTTCEE---EEEEEGGGSCTTCCEEEECCSTT----G-GGTSEEEEEEC
T ss_pred ccCCCceE---EEEEEecccCCCccEEEEeCCCC----h-hhCcEEEEEEc
Confidence 57899988 8888885 37999999997755 4 47999999884
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.96 E-value=0.001 Score=56.02 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=34.2
Q ss_pred ccCCCCCcceeeEEEEcC--ccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 169 FEEKGPTWTNETYHYHNM--QQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~--~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.+.||++. +..|.+. ..+|+|-|=|=.-| | ++||.|.|+|+
T Consensus 86 ~l~pGes~---~i~f~~p~~~~~G~Y~f~Ct~PG----H-~~gM~G~l~Ve 128 (128)
T d1jzga_ 86 LIGSGEKD---SVTFDVSKLKEGEQYMFFCTFPG----H-SALMKGTLTLK 128 (128)
T ss_dssp CBCTTCEE---EEEEEGGGCCTTCCEEEECCSTT----G-GGTSEEEEEEC
T ss_pred ccCCCceE---EEEEEeeccCCCceEEEEECCCC----c-ccccEEEEEEC
Confidence 58899998 8889885 47999999997655 3 48999999985
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=96.95 E-value=0.0013 Score=54.82 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=52.7
Q ss_pred cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCCCCCCCCcceeccccCCCCCcceee
Q 008840 101 PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPESDGYAKSWFTAGFEEKGPTWTNET 180 (551)
Q Consensus 101 Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~~DG~p~~~~t~~~i~pG~~~~~~~ 180 (551)
..|.++.|++|++++.|.-- .+++...++ | +.. .+.||..- +
T Consensus 47 ~~l~vp~G~~V~~~lts~DV----------------------~H~f~ip~~-------~-----v~~-d~~PG~~~---~ 88 (122)
T d2cuaa_ 47 NPIEVPQGAEIVFKITSPDV----------------------IHGFHVEGT-------N-----INV-EVLPGEVS---T 88 (122)
T ss_dssp SSEEEETTSEEEEEEEBSSS----------------------CEEEEETTS-------S-----CEE-EECBTBCE---E
T ss_pred CEEEEeCCCEEEEEEEcCCc----------------------cceeEecCC-------C-----eeE-EEecCceE---E
Confidence 38999999999999999621 333333221 1 111 25688876 7
Q ss_pred EEEEcCccCceeEEeccCC-CchhhhhhccceEEEEEeC
Q 008840 181 YHYHNMQQPGNTWYHDHTM-GLTRVNLLAGLIGAYILRH 218 (551)
Q Consensus 181 y~f~~~~~~Gt~wYH~H~~-g~t~~qv~~GL~G~~iV~d 218 (551)
..|+++ .+|+|+|.|+.. |.. | .+|.|-++|+|
T Consensus 89 ~~~~~~-~~G~y~~~C~~~CG~~--H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 89 VRYTFK-RPGEYRIICNQYCGLG--H--QNMFGTIVVKE 122 (122)
T ss_dssp EEEECC-SCEEEEEECCSCCSTT--S--TTCEEEEEEEC
T ss_pred EEEEec-cceeEEEEehhccCCC--c--ccCeEEEEEEC
Confidence 889986 999999999952 221 2 58999999984
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=96.94 E-value=0.00062 Score=57.62 Aligned_cols=41 Identities=17% Similarity=0.273 Sum_probs=34.1
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+.||++.+..++.. +.+| |+||||...|...||.+.+.|-
T Consensus 86 ~i~PG~s~~Y~~~~~-------------~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 127 (130)
T d1gyca1 86 PIASGHSFLYDFHVP-------------DQAGTFWYHSHLSTQYCDGLRGPFVVY 127 (130)
T ss_dssp CBCTTEEEEEEEECS-------------SCCEEEEEEECSTTGGGGTCEEEEEEE
T ss_pred CCCCCCeEEEEEECC-------------CCCceeEEecCCHHHHhCCCEEEEEEe
Confidence 489999999966543 1457 9999999999999999999874
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=96.67 E-value=0.0028 Score=53.25 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=34.0
Q ss_pred ccCCCCCcceeeEEEEcC--ccCceeEEeccCCCchhhhhhccceEEEEEe
Q 008840 169 FEEKGPTWTNETYHYHNM--QQPGNTWYHDHTMGLTRVNLLAGLIGAYILR 217 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~--~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~ 217 (551)
.+.||++. +..|.+. ..+|+|-|=|=.-| | ++||.|.++|+
T Consensus 86 ~l~pGes~---~i~f~~p~~~~~G~Y~f~Ct~PG----H-~~~M~G~l~V~ 128 (128)
T d1nwpa_ 86 VIGAGEKD---SVTFDVSKLAAGEKYGFFCSFPG----H-ISMMKGTVTLK 128 (128)
T ss_dssp CBCTTCEE---EEEEEGGGSCTTSCEEEECCSTT----C-GGGSEEEEEEC
T ss_pred cccCCCce---EEEEEecccCCCceEEEEECCCC----c-ccCceEEEEEC
Confidence 57899988 8889885 37899999998755 3 48999999985
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=96.59 E-value=0.013 Score=53.67 Aligned_cols=42 Identities=21% Similarity=0.337 Sum_probs=33.6
Q ss_pred cCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 170 EEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 170 i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+.||+.. +.+|.++ .+|.|.||||.. .|..+||+-.++.+ |+
T Consensus 138 v~~~g~~---~ir~~ad-npG~Wl~HCHi~----~H~~~GM~~~~~~~-p~ 179 (216)
T d2q9oa3 138 LPAGGWL---LLAFRTD-NPGAWLFHCHIA----WHVSGGLSVDFLER-PA 179 (216)
T ss_dssp ECTTSEE---EEEEECC-SCEEEEEEECCH----HHHHTTCEEEEEEC-HH
T ss_pred eCCCCEE---EEEEECC-CCeEEEEEccCC----cccccCCeEEEEEc-ch
Confidence 5677766 8999996 899999999984 57889998777444 54
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=96.36 E-value=0.0011 Score=56.09 Aligned_cols=41 Identities=20% Similarity=0.308 Sum_probs=32.6
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+.||++.+..++.. +.+| |.||||...|...||.+.+.|-
T Consensus 86 ~I~PG~~~~y~~~~~-------------~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 127 (131)
T d1hfua1 86 PISPGHAFLYKFTPA-------------GHAGTFWYHSHFGTQYCDGLRGPMVIY 127 (131)
T ss_dssp CBCTTCEEEEEECCT-------------TCCEEEEEEECSTTGGGGTCEEEEEEE
T ss_pred eECCCCeEEEEEeCC-------------CCcceEEEecCCHHHHhCCCEEEEEEc
Confidence 578999887744432 1356 9999999999999999999874
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=96.36 E-value=0.0026 Score=56.02 Aligned_cols=77 Identities=14% Similarity=0.062 Sum_probs=58.2
Q ss_pred CCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCcceec--cccCCCCC
Q 008840 99 PGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFTA--GFEEKGPT 175 (551)
Q Consensus 99 PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t~--~~i~pG~~ 175 (551)
+-++|.+++|+++++|+.|.-... ...+|++|....- ..||.+-.++.. -.|.||++
T Consensus 53 ~~~~~~v~~g~~~rlRlina~~~~--------------------~~~~~id~H~~~Via~DG~~v~P~~~d~i~i~~GqR 112 (168)
T d1v10a2 53 QLAVVSVQSGKRYRFRIVSTSCFP--------------------NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQR 112 (168)
T ss_dssp CCCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCE
T ss_pred CceEEEECCCCEEEEEEEecccCc--------------------eEEEEECCCeEEEEEeCCeecCceEEeEEEEccCce
Confidence 567999999999999999986542 5677777765432 279987433322 24789999
Q ss_pred cceeeEEEEcCccCceeEEeccC
Q 008840 176 WTNETYHYHNMQQPGNTWYHDHT 198 (551)
Q Consensus 176 ~~~~~y~f~~~~~~Gt~wYH~H~ 198 (551)
+ +.-+.+++.+|.||-+...
T Consensus 113 ~---dvlv~~~~~~~~y~ira~~ 132 (168)
T d1v10a2 113 Y---SVVVEANQAVGNYWIRANP 132 (168)
T ss_dssp E---EEEEECCSCSSEEEEEEEE
T ss_pred E---EEEEECCCCCCcEEEEEEe
Confidence 8 8888998889999998753
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=96.20 E-value=0.0042 Score=54.74 Aligned_cols=80 Identities=14% Similarity=0.095 Sum_probs=60.1
Q ss_pred CCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCC
Q 008840 96 ASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEK 172 (551)
Q Consensus 96 g~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~p 172 (551)
..-+.++|.+++|+++++|+.|.-... ...++.+|....- ..||.+-.++. .-.|.|
T Consensus 51 ~~~~~~~~~v~~g~~~rlRlIN~~~~~--------------------~~~~~id~h~~~via~DG~~v~P~~~d~l~i~~ 110 (170)
T d1gyca2 51 PTAALAVINVQHGKRYRFRLVSISCDP--------------------NYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFA 110 (170)
T ss_dssp TTSCCCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CCCCceEEEECCCCEEEEEEeecCCCc--------------------eeeEEeCCCeEEEEEeCCeeccceEeeEEEecC
Confidence 345678999999999999999986542 5777777765433 27898633222 224789
Q ss_pred CCCcceeeEEEEcCccCceeEEeccC
Q 008840 173 GPTWTNETYHYHNMQQPGNTWYHDHT 198 (551)
Q Consensus 173 G~~~~~~~y~f~~~~~~Gt~wYH~H~ 198 (551)
|++| +.-+++++.+|.||-+...
T Consensus 111 gqRy---dvlv~~~~~~~~y~ira~~ 133 (170)
T d1gyca2 111 AQRY---SFVLNANQTVGNYWIRANP 133 (170)
T ss_dssp TCEE---EEEEECCSCSSEEEEEEEE
T ss_pred CeEE---EEEEeCCCCCCcEEEEEec
Confidence 9998 8888998889999998764
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.19 E-value=0.0021 Score=54.37 Aligned_cols=40 Identities=23% Similarity=0.386 Sum_probs=33.1
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccc-cCcccceEE
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHED-NIMMRPLKL 549 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED-~GMM~~~~V 549 (551)
..+.||++.++.|+++ .|| |.||||..-|.. .||.+.+.|
T Consensus 88 ~~~~PG~~~~~~F~a~--------------~~G~y~~~C~~~cg~~H~~M~G~iiV 129 (132)
T d1fwxa1 88 MEIGPQMTSSVTFVAA--------------NPGVYWYYCQWFCHALHMEMRGRMLV 129 (132)
T ss_dssp EEECTTCEEEEEEECC--------------SCEEEEEECCSCCSTTCTTCEEEEEE
T ss_pred cccCCCEEEEEEEeCC--------------CCeEEEEECccccCcchhcCEEEEEE
Confidence 3578999999977776 678 999999988874 788888876
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=96.12 E-value=0.0051 Score=54.32 Aligned_cols=78 Identities=13% Similarity=0.035 Sum_probs=57.7
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCcceec--cccCCCC
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFTA--GFEEKGP 174 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t~--~~i~pG~ 174 (551)
-+.++|.+++|+++++|+.|.-... ...+++.|....- ..||.+-.+++. -.|.||+
T Consensus 51 ~~~~~~~v~~g~~~rlR~iN~~~~~--------------------~~~~~i~~H~~~via~DG~~v~P~~~~~l~i~~gq 110 (172)
T d1hfua2 51 AELSIVNVEQGKKYRMRLISLSCDP--------------------NWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 110 (172)
T ss_dssp CCCCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTC
T ss_pred CCceEEEECCCCEEEEEEeeecCCc--------------------eEEEEeCCCeEEEEEeCCEEcccEEeceEeccCCe
Confidence 4678999999999999999975542 5666766664322 278986333322 2478999
Q ss_pred CcceeeEEEEcCccCceeEEeccC
Q 008840 175 TWTNETYHYHNMQQPGNTWYHDHT 198 (551)
Q Consensus 175 ~~~~~~y~f~~~~~~Gt~wYH~H~ 198 (551)
+| +.-+.+++.+|.||.....
T Consensus 111 R~---dvlv~~~~~~~~Y~ira~~ 131 (172)
T d1hfua2 111 RY---SFVLDANQPVDNYWIRAQP 131 (172)
T ss_dssp EE---EEEEECCSCSSEEEEEEEE
T ss_pred EE---EEEEEcCCCCCcEEEEEEe
Confidence 88 7888888889999998764
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=96.10 E-value=0.0066 Score=54.00 Aligned_cols=80 Identities=15% Similarity=0.081 Sum_probs=60.1
Q ss_pred CCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCcceec--cccCCC
Q 008840 97 SVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFTA--GFEEKG 173 (551)
Q Consensus 97 ~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t~--~~i~pG 173 (551)
.-+-.+|.+++|++.++|+.|.-... ...++++|....- ..||.+-.++.- -.|.||
T Consensus 49 ~~~~~~~~v~~g~~~rlR~iN~~~~~--------------------~~~~~id~h~~~via~DG~~v~P~~~~~~~i~~G 108 (181)
T d2q9oa2 49 EGQYANVTLTPGKRHRLRILNTSTEN--------------------HFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVG 108 (181)
T ss_dssp CBCCCEEEECTTCEEEEEEEECCSSC--------------------CEEEEETTBCEEEEEETTEEEEEEEESCEEECTT
T ss_pred CCcceEEEECCCCEEEEEEecccCCc--------------------cEEEEECCceEEEEEeCCeEccceEeCEEEecCC
Confidence 34567899999999999999986542 6778888775433 378987433221 247899
Q ss_pred CCcceeeEEEEcCccCceeEEeccCC
Q 008840 174 PTWTNETYHYHNMQQPGNTWYHDHTM 199 (551)
Q Consensus 174 ~~~~~~~y~f~~~~~~Gt~wYH~H~~ 199 (551)
++| +.-+.+++.+|.||-.....
T Consensus 109 qRy---dvlv~a~~~~~~Y~ir~~~~ 131 (181)
T d2q9oa2 109 QRY---DVVIDASRAPDNYWFNVTFG 131 (181)
T ss_dssp CEE---EEEEECCSCSSEEEEEEECC
T ss_pred cEE---EEEEeCCCCCccEEEEEecc
Confidence 988 88888888999999887764
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=95.19 E-value=0.0081 Score=54.53 Aligned_cols=79 Identities=13% Similarity=-0.014 Sum_probs=56.6
Q ss_pred CCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCC-CCCCCCCccee--ccccCCCC
Q 008840 98 VPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEP-ESDGYAKSWFT--AGFEEKGP 174 (551)
Q Consensus 98 ~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~-~~DG~p~~~~t--~~~i~pG~ 174 (551)
.+-|+|+|++|+++++||.|.-... ...+|++|....- ..||.+-.++. .-.|.||+
T Consensus 72 ~~~~~~~v~~g~~~RlRliNa~~~~--------------------~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGq 131 (209)
T d1aoza2 72 CAPYIFHVSPKKTYRIRIASTTALA--------------------ALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGE 131 (209)
T ss_dssp TSCCCEEECTTCEEEEEEEECCSSC--------------------EEEEEETTCCEEEEEETTEEEEEEEESCEEECTTC
T ss_pred CCceEEEEcCCCEEEEEEEecCCce--------------------eEEEEeCCCcEEEEecCCEEcccceeeeEEEccCc
Confidence 4568899999999999999986542 5788888865433 27898633322 12478999
Q ss_pred CcceeeEEEEcCccCc-eeEEeccCC
Q 008840 175 TWTNETYHYHNMQQPG-NTWYHDHTM 199 (551)
Q Consensus 175 ~~~~~~y~f~~~~~~G-t~wYH~H~~ 199 (551)
+| +..+.+++.+| .||-+....
T Consensus 132 Ry---dvlv~~~~~~~~~y~i~~~~~ 154 (209)
T d1aoza2 132 SY---SVLITTDQNPSENYWVSVGTR 154 (209)
T ss_dssp EE---EEEEECCSCTTCCEEEEEEEE
T ss_pred EE---EEEEEecCCCCCceEEEEecc
Confidence 98 88888876554 688775543
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=94.86 E-value=0.01 Score=50.12 Aligned_cols=42 Identities=17% Similarity=0.208 Sum_probs=33.2
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
..|.||++.+-.++.. ..+| |.||||.-.|...||.+.+.|-
T Consensus 85 ~~I~PG~~~~Y~~~~~-------------~~~Gt~wYH~H~~~q~~~GL~G~liV~ 127 (136)
T d1v10a1 85 CPIIPNESFVYDFVVP-------------GQAGTYWYHSHLSTQYCDGLRGAFVVY 127 (136)
T ss_dssp CCBCTTEEEEEEEECT-------------TCCEEEEEEECSTTGGGGTCEEEEEEE
T ss_pred ceECCCCeEEEEEECC-------------CCccceEEecCchhHHhCCCEEEEEEC
Confidence 3478999888755543 1347 9999999999999999999773
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=94.59 E-value=0.087 Score=45.73 Aligned_cols=105 Identities=18% Similarity=0.261 Sum_probs=68.5
Q ss_pred cEEEeecCCCCCCCCC-cEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEeeCCCCCCCC-CCCCCC
Q 008840 85 PVFAFGTSSLTASVPG-PTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHLHGGIDEPE-SDGYAK 162 (551)
Q Consensus 85 ~~~~y~~~~~ng~~PG-Pti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~-~DG~p~ 162 (551)
+...||.. -|++-| =.|+++.||+|. +.|.-+.. .++.|.-|.+...- .+|...
T Consensus 55 thVVFNG~--vgaltg~~aL~AkvGEtV~--~~~~gpN~--------------------~SsfHvIGg~~D~V~~~G~~~ 110 (178)
T d1mzya2 55 SHIVFNGA--VGALTGEGALKAKVGDNVL--FVHSQPNR--------------------DSRPHLIGGHGDLVWETGKFH 110 (178)
T ss_dssp SEEEETTS--TTTTSGGGCEEEETTCEEE--EEEEESSS--------------------CBCEEEETCCEEEEETTCCTT
T ss_pred CEEEECCc--cCcccCCCCcccccCCeEE--EecccCCC--------------------CCCcccccCccceEccCCccC
Confidence 34566621 134434 369999999874 56766653 78999999986432 233321
Q ss_pred c----ceeccccCCCCCcceeeEEEEcCccCceeEEeccCCCchhhhhhccceEEEEEeCCC
Q 008840 163 S----WFTAGFEEKGPTWTNETYHYHNMQQPGNTWYHDHTMGLTRVNLLAGLIGAYILRHPD 220 (551)
Q Consensus 163 ~----~~t~~~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~~g~t~~qv~~GL~G~~iV~dp~ 220 (551)
+ -+....|.+|+.- ...|+.. +||+|-|-+|.. .+ -+..|..|.|.|+++.
T Consensus 111 n~p~~~~qT~~v~~G~a~---~~~~tf~-~PG~Y~~VdH~l--~~-A~~kGA~g~l~V~G~~ 165 (178)
T d1mzya2 111 NAPERDLETWFIRGGTAG---AALYKFL-QPGVYAYVNHNL--IE-AVHKGATAHVLVEGEW 165 (178)
T ss_dssp SCCEEEESBCCBCTTEEE---EEEEECC-SCEEEEEEESSH--HH-HHTTCCEEEEEEESCC
T ss_pred CCCCCCceEEEecCCcee---EEEEEeC-CCeEEEEEccHH--HH-HHhCCCeEEEEeCCCC
Confidence 1 1122257777665 5666664 899999999984 22 2458999999999776
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=94.13 E-value=0.019 Score=45.43 Aligned_cols=41 Identities=24% Similarity=0.372 Sum_probs=32.3
Q ss_pred CcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 491 GWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 491 ~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+.+...+.+|++.++ .|+ .|| |-|||.+ |+..||.+.|.|
T Consensus 56 ~~~~~~~~~~g~t~~~--tf~--------------~~G~y~Y~C~~--H~~~gM~G~I~V 97 (98)
T d1pcsa_ 56 LSHKGLLFAAGESFTS--TFT--------------EPGTYTYYCEP--HRGAGMVGKVVV 97 (98)
T ss_dssp HCEEEEECSTTCEEEE--ECC--------------SCEEEEEECGG--GTTTTCEEEEEE
T ss_pred ccccccccCCCcEEEE--ecc--------------CCceEEEEecc--CCCCCCEEEEEE
Confidence 3455667788887776 566 567 9999975 999999999987
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=93.96 E-value=0.026 Score=46.59 Aligned_cols=23 Identities=22% Similarity=0.286 Sum_probs=20.2
Q ss_pred CCc-eEEeeccccccccCcccceEEc
Q 008840 526 EPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 526 ~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+| |-|+|.+ |..+||.+.+.|-
T Consensus 70 ~~G~Y~Y~C~p--H~~~GM~G~I~Vg 93 (123)
T d1pmya_ 70 KEGVYGFKCAP--HYMMGMVALVVVG 93 (123)
T ss_dssp SCEEEEEECST--TTTTTCEEEEEES
T ss_pred CCceEEEEecc--CCCCCCEEEEEEC
Confidence 568 9999976 9999999999873
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=93.55 E-value=0.025 Score=44.09 Aligned_cols=41 Identities=29% Similarity=0.490 Sum_probs=33.5
Q ss_pred CcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 491 GWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 491 ~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+.+...+.+|++.++ .|+ .|| |.|+|.+ |...||-+.+.|
T Consensus 49 ~~~~~~~~~~g~~~~~--tF~--------------~~G~y~Y~C~~--H~~~gM~G~I~V 90 (91)
T d1bxua_ 49 LSHKDLAFSPGETFEA--TFS--------------EPGTYTYYCEP--HRGAGMVGKIVV 90 (91)
T ss_dssp GCEEEEECSTTCEEEE--ECC--------------SCEEEEEECTT--TGGGTCEEEEEE
T ss_pred ccccccccCCCCCEEE--Eec--------------cCceEEEEeCC--CCCCCCEEEEEE
Confidence 3566788889998776 666 568 9999975 999999999887
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=93.11 E-value=0.042 Score=45.88 Aligned_cols=41 Identities=22% Similarity=0.395 Sum_probs=32.6
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccc-cCcccceEEc
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHED-NIMMRPLKLI 550 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED-~GMM~~~~V~ 550 (551)
..+.||++.++.+.++ +|| |.|||+..-|.. .+|.+.+.|.
T Consensus 87 ~~~~PG~t~~~~f~~~--------------~~G~y~~~C~~~cg~~H~~M~g~i~Ve 129 (131)
T d1qnia1 87 MEISPQQTASVTFTAG--------------KPGVYWYYCNWFCHALHMEMVGRMLVE 129 (131)
T ss_dssp EEECTTCEEEEEEECC--------------SSEEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred cccCCCceEEEEEEcC--------------CCEEEEEECccccCcchhcCeeEEEEE
Confidence 3478999999988776 678 999999987764 6788877763
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=92.72 E-value=0.035 Score=44.14 Aligned_cols=44 Identities=20% Similarity=0.297 Sum_probs=35.0
Q ss_pred CcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 491 GWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 491 ~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+.++..+.||+...+.+... ..+| |-|+|.. |...||.+.|.|
T Consensus 59 ~~~~~~~~~~g~~~~~~f~~~-------------~~~G~y~y~C~~--H~~~GM~G~I~V 103 (105)
T d2q5ba1 59 LSHSQLMFSPGESYEITFSSD-------------FPAGTYTYYCAP--HRGAGMVGKITV 103 (105)
T ss_dssp HCEEEEECSTTCEEEEEECTT-------------SCSEEEEEECST--TGGGTCEEEEEE
T ss_pred cccccccccCCceEEEEEEec-------------cCCceEEEEeCC--CCCCCCEEEEEE
Confidence 467888999999988855321 1457 9999985 999999999987
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=91.86 E-value=0.067 Score=41.80 Aligned_cols=40 Identities=23% Similarity=0.476 Sum_probs=30.7
Q ss_pred cCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 492 WKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 492 wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
..+.....++.+.++ .|. .+| |-|+|.. |...||-+.|.|
T Consensus 57 ~~~~~~~~~~~t~~~--tf~--------------~~G~y~y~C~~--H~~~GM~G~I~V 97 (98)
T d2plta_ 57 SRDDYLNAPGETYSV--KLT--------------AAGEYGYYCEP--HQGAGMVGKIIV 97 (98)
T ss_dssp CEEEEECSTTCEEEE--ECC--------------SCEEEEEECGG--GGGGTCEEEEEE
T ss_pred cccccccCCCceEEE--Eec--------------CCceEEEEeCc--CCCCCCEEEEEE
Confidence 345666777776555 665 457 9999974 999999999887
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=90.72 E-value=0.13 Score=42.03 Aligned_cols=23 Identities=26% Similarity=0.486 Sum_probs=20.3
Q ss_pred CCc-eEEeeccccccccCcccceEEc
Q 008840 526 EPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 526 ~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.|| |-|+|-. |...||.+.+.|-
T Consensus 70 ~~G~y~Y~Ctp--H~~~GM~G~I~Vg 93 (120)
T d1paza_ 70 QPGAYLVKCTP--HYAMGMIALIAVG 93 (120)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEES
T ss_pred CCCeEEEEEee--CCCCCCEEEEEEC
Confidence 568 9999975 9999999999884
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.92 E-value=0.072 Score=38.90 Aligned_cols=47 Identities=11% Similarity=0.160 Sum_probs=30.1
Q ss_pred eCCCcEEEEEEEEeccccCCCCCCCCCCCC---ceEEeecccc--ccccCcccceEEc
Q 008840 498 ITPGYVTRILVRFSYVHANASYPFDATAEP---GYVYHCHILD--HEDNIMMRPLKLI 550 (551)
Q Consensus 498 v~pg~~v~i~~~f~~~~~~~~~p~~~~~~p---g~~~HCHiL~--HED~GMM~~~~V~ 550 (551)
|.||++.+=.+... +.++.-+ ..+ .|+||||.-. +...||++.|.|-
T Consensus 3 V~PG~t~tY~w~v~--~~~gp~~----~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~ 54 (67)
T d1sddb1 3 IQPNKTYTYVWHAT--TRSGPEN----PGSACRAWAYYSAVNPEKDIHSGLIGPLLIC 54 (67)
T ss_dssp BCTTCCEECCEECC--TTTSCCS----SSCSEEEEEEECCSSHHHHHTTTCEEEEEEE
T ss_pred CCCCCeEEEEEEcC--CcCCCcc----CCCCceeEEEEcccchHHHhhCCceEEEEEc
Confidence 57888877755554 2221000 011 3999999965 6677999999884
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.55 E-value=0.13 Score=45.15 Aligned_cols=50 Identities=14% Similarity=0.038 Sum_probs=33.4
Q ss_pred EeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccc--ccccCcccceEEc
Q 008840 497 KITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILD--HEDNIMMRPLKLI 550 (551)
Q Consensus 497 ~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~--HED~GMM~~~~V~ 550 (551)
.|.||++.+..+.... ..+..+=| .+.| |+||||.-. |-..||++++.|-
T Consensus 113 ~V~PGet~tY~w~v~~--~~gp~~~d--~~~gt~~YHshv~~~~~~~~GL~G~lIV~ 165 (180)
T d1sdda1 113 AVAPGQEYTYEWIISE--HSGPTHDD--PPCLTHIYYSYVNLVEDFNSGLIGPLLIC 165 (180)
T ss_dssp CBCTTCEEEEEEECCG--GGSCCSSS--CSEEEEEEECCSSSHHHHHTTCCEEEEEE
T ss_pred ccCCCCEEEEEEEeCC--cccCccCC--CCCEEEEEecCCCcHHHhhCCceEEEEEc
Confidence 3899999999777762 21111100 1236 999999744 6677999999874
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=89.54 E-value=0.21 Score=40.75 Aligned_cols=23 Identities=30% Similarity=0.423 Sum_probs=19.9
Q ss_pred CCc-eEEeeccccccccCcccceEEc
Q 008840 526 EPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 526 ~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
.+| |-|+|=+ |..+||.+.+.|-
T Consensus 70 ~~G~Y~Y~C~p--H~~~GM~G~I~Vg 93 (123)
T d1adwa_ 70 EPGLYGVKCTP--HFGMGMVGLVQVG 93 (123)
T ss_dssp SCEEEEEECGG--GGGGTCEEEEEES
T ss_pred CCCeEEEEEcc--CCCCCCEEEEEEC
Confidence 567 9999965 9999999999884
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=88.92 E-value=0.14 Score=40.12 Aligned_cols=39 Identities=18% Similarity=0.354 Sum_probs=30.0
Q ss_pred CccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 493 KNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 493 kDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+.....||++.++ .|+ .|| |-|+|- -|...||.+.+.|
T Consensus 59 ~~~~~~~~g~t~~~--tF~--------------~~G~y~Y~C~--pH~~~GM~G~I~V 98 (99)
T d1plca_ 59 EEDLLNAKGETFEV--ALS--------------NKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp TTCCBCSTTCEEEE--ECC--------------SCEEEEEECG--GGTTTTCEEEEEE
T ss_pred ccccccCCCceEEE--ecC--------------CCceEEEEeC--CCcCCCcEEEEEE
Confidence 34455678887766 566 567 999994 5999999999976
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.65 E-value=0.24 Score=44.42 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=32.7
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCC-ceEEeecccccc--ccCcccceEEc
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEP-GYVYHCHILDHE--DNIMMRPLKLI 550 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~p-g~~~HCHiL~HE--D~GMM~~~~V~ 550 (551)
-.|.||++.+-.+... +..+--+-|. += .|+||||.-..+ ..||++++.|-
T Consensus 142 ~~V~PGet~tY~w~v~--~~~gP~~~d~--~c~T~~YHshv~~~~d~~~GL~G~lIV~ 195 (207)
T d2j5wa3 142 SHVAPTETFTYEWTVP--KEVGPTNADP--VCLAKMYYSAVDPTKDIFTGLIGPMKIC 195 (207)
T ss_dssp SCBCTTCEEEEEEECC--GGGSCCSSSC--SEEEEEEECBSSHHHHHHHTCEEEEEEE
T ss_pred ceecCCCEEEEEEEec--CCCCCccCCC--CceeEEEccCCChhHhhccCceEEEEEc
Confidence 3489999999977665 2221001000 11 299999986655 56999999884
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=86.84 E-value=0.14 Score=40.18 Aligned_cols=22 Identities=32% Similarity=0.696 Sum_probs=19.5
Q ss_pred CCc-eEEeeccccccccCcccceEE
Q 008840 526 EPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 526 ~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.+| |-|+|.. |...||-+.|.|
T Consensus 79 ~~G~y~Y~C~~--H~~~GM~G~I~V 101 (102)
T d1kdja_ 79 TPGTYTFYCTP--HKSANMKGTLTV 101 (102)
T ss_dssp SCEEEEEECST--TGGGTCEEEEEE
T ss_pred CCceEEEEecC--CcccCCeEEEEE
Confidence 467 9999985 999999999987
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=86.71 E-value=0.27 Score=38.18 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=31.0
Q ss_pred CcCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 491 GWKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 491 ~wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
...+.....++++.++ .|. .|| |-|+|-. |...||.+.|.|
T Consensus 57 ~~~~~~~~~~~~~~~~--tf~--------------~~G~y~y~C~~--H~~~GM~G~I~V 98 (99)
T d1bypa_ 57 MPEEDLLNAPGEEYSV--TLT--------------EKGTYKFYCAP--HAGAGMVGKVTV 98 (99)
T ss_dssp CCTTCCBCSTTCEEEE--EEC--------------SCEEEEEECGG--GTTTTCEEEEEE
T ss_pred ccccccccCCCceEEE--Eec--------------CCceEEEEECc--CCCCCCEEEEEE
Confidence 3455666677776665 666 567 9999964 999999999887
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=84.12 E-value=0.35 Score=39.81 Aligned_cols=44 Identities=27% Similarity=0.330 Sum_probs=35.9
Q ss_pred cEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEEc
Q 008840 495 VYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKLI 550 (551)
Q Consensus 495 TV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V~ 550 (551)
|..+.||++.+|.++|... ..|| |-|=|=+--|+ .||-+.++|-
T Consensus 84 t~~l~pget~~i~f~~p~~-----------~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 84 TKVIGGGESDSVTFDVSKI-----------AAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp CCCBCTTCEEEEEEEGGGS-----------CTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred ccccCCCceEEEEEEeccc-----------CCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 7788999999998887521 1467 99999999998 8999888873
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=84.10 E-value=0.31 Score=37.68 Aligned_cols=22 Identities=27% Similarity=0.664 Sum_probs=19.1
Q ss_pred CCc-eEEeeccccccccCcccceEE
Q 008840 526 EPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 526 ~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
.|| |-|+|-. |...||.+.|.|
T Consensus 74 ~~G~y~Y~C~~--H~~~GM~G~I~V 96 (97)
T d2jxma1 74 TPGTYSFYCTP--HRGAGMVGTITV 96 (97)
T ss_dssp SCSEEEEECSS--TTTTTCEEEEEE
T ss_pred CCeEEEEEEcc--CCCCCCEEEEEE
Confidence 567 9999954 999999999887
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=83.77 E-value=0.71 Score=39.54 Aligned_cols=77 Identities=9% Similarity=-0.204 Sum_probs=49.3
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEee-CCCCC-CCCCCCCCC-ccee--cc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHL-HGGID-EPESDGYAK-SWFT--AG 168 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~-HG~~~-~~~~DG~p~-~~~t--~~ 168 (551)
.||+ +.|++.++ |.++|+|+.|.-... ...+++ +|... --..||.+- .+++ .-
T Consensus 46 vNG~-~~p~~~~~-~~~~RlR~iNa~~~~--------------------~~~~~~~~g~~~~via~DG~~~~~P~~~~~l 103 (165)
T d1kv7a2 46 TNGA-IYPQHAAP-RGWLRLRLLNGCNAR--------------------SLNFATSDNRPLYVIASDGGLLPEPVKVSEL 103 (165)
T ss_dssp ETTB-SSCEEEEE-EEEEEEEEEECCSSC--------------------CEEEEETTCCCEEEEEETTEEEEEEEEESCE
T ss_pred EcCc-ccceEecc-CcEEEEEEEEcccCc--------------------eeeEEecCCCeEEEEEeCCccccCceEeCeE
Confidence 4686 57999986 779999999975542 345655 55431 223788763 2222 23
Q ss_pred ccCCCCCcceeeEEEEcCccCceeEEe
Q 008840 169 FEEKGPTWTNETYHYHNMQQPGNTWYH 195 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~~Gt~wYH 195 (551)
.+.||+++ +.-+.+.+..+..|++
T Consensus 104 ~l~pgeR~---dvlv~~~~~~~~~~~~ 127 (165)
T d1kv7a2 104 PVLMGERF---EVLVEVNDNKPFDLVT 127 (165)
T ss_dssp EECTTCEE---EEEEEECTTCCEEEEE
T ss_pred EECCCCEE---EEEEECCCCCcEEEEE
Confidence 57899987 6666665555556665
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.64 E-value=0.39 Score=41.84 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=32.7
Q ss_pred eCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecccc--ccccCcccceEEcC
Q 008840 498 ITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILD--HEDNIMMRPLKLIK 551 (551)
Q Consensus 498 v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~--HED~GMM~~~~V~~ 551 (551)
+.||++.+-.+... ...+..+-+ .+-+ |+||||.-. |-..||++++.|-|
T Consensus 125 v~PGet~tY~w~v~--~~~gp~~~d--~~c~t~~YHShv~~~~d~~sGL~GplIVc~ 177 (179)
T d2j5wa4 125 TLPGETLTYVWKIP--ERSGAGTED--SACIPWAYYSTVDQVKDLYSGLIGPLIVCR 177 (179)
T ss_dssp BCTTCEEEEEEECC--GGGSCCTTS--CSEEEEEEECCTTHHHHHHTTCEEEEEEEC
T ss_pred ccCCccEEEEEEec--CccCCccCC--CCceeEEEecCCCcHHHhhCCCeEEEEEEe
Confidence 67999988765554 222211111 1335 999999844 66789999998854
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=83.48 E-value=0.48 Score=38.57 Aligned_cols=39 Identities=28% Similarity=0.581 Sum_probs=31.1
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeecc---ccccccCcccceEEc
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHI---LDHEDNIMMRPLKLI 550 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHi---L~HED~GMM~~~~V~ 550 (551)
+.+.||++..+.+.|+ +|| |.+.|+. ..|. +|.+.+.|.
T Consensus 79 ~d~~PG~~~~~~~~~~--------------~~G~y~~~C~~~CG~~H~--~M~g~i~V~ 121 (122)
T d2cuaa_ 79 VEVLPGEVSTVRYTFK--------------RPGEYRIICNQYCGLGHQ--NMFGTIVVK 121 (122)
T ss_dssp EEECBTBCEEEEEECC--------------SCEEEEEECCSCCSTTST--TCEEEEEEE
T ss_pred EEEecCceEEEEEEec--------------cceeEEEEehhccCCCcc--cCeEEEEEE
Confidence 4577999999988776 678 9999998 5674 688888774
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=82.44 E-value=0.54 Score=36.28 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=27.4
Q ss_pred EEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 496 YKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 496 V~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
....++++.++ .|+ .|| |-|+|-. |...||.+.|.|
T Consensus 61 ~~~~~~~~~~~--~f~--------------~~G~y~y~C~~--H~~~GM~G~I~V 97 (98)
T d1iuza_ 61 YLNSKGETVVR--KLS--------------TPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EECSTTCEEEE--ECC--------------SCEEEEEECTT--TGGGTCEEEEEE
T ss_pred cccCCCcEEEE--ecC--------------CCceEEEEeCC--CccCCCeEEEEE
Confidence 44566666554 666 567 9999964 999999999987
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=82.37 E-value=0.58 Score=40.52 Aligned_cols=80 Identities=13% Similarity=-0.017 Sum_probs=51.8
Q ss_pred CCCCCCCcEEEEECCCEEEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCCeEEee-CCCCC-CCCCCCCCC-ccee--cc
Q 008840 94 LTASVPGPTIEALHGIDTYVTWQNHLPPNHILPIDPTIPTAMPSNKKGVPTVVHL-HGGID-EPESDGYAK-SWFT--AG 168 (551)
Q Consensus 94 ~ng~~PGPti~v~~Gd~v~v~l~N~L~~~~~~~~~~~~~~~~~~~~~~~~t~iH~-HG~~~-~~~~DG~p~-~~~t--~~ 168 (551)
.||+ +.|++.++ |.++|+|+.|.-... ...+++ +|... --.+||.+- .++. .-
T Consensus 53 vNG~-~~p~~~v~-~~~~RlRliNa~~~~--------------------~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l 110 (174)
T d1gska2 53 VNGK-VWPYLEVE-PRKYRFRVINASNTR--------------------TYNLSLDNGGDFIQIGSDGGLLPRSVKLNSF 110 (174)
T ss_dssp ETTE-ESCEEECC-SSEEEEEEEECCSSC--------------------CEEEEETTCCCEEEEEETTEEEEEEEEESEE
T ss_pred ecCc-cceEEEec-CceEEEEEEecccCc--------------------eeeEeecCCCcEEEEEECCCcccCceEeCEE
Confidence 3564 47888876 567999999986652 567777 46432 233788762 2222 23
Q ss_pred ccCCCCCcceeeEEEEcCccCceeEEeccC
Q 008840 169 FEEKGPTWTNETYHYHNMQQPGNTWYHDHT 198 (551)
Q Consensus 169 ~i~pG~~~~~~~y~f~~~~~~Gt~wYH~H~ 198 (551)
.+.||+++ +.-+...+.+|++|+=-+.
T Consensus 111 ~l~pgeR~---dvlv~~~~~~g~~~~l~~~ 137 (174)
T d1gska2 111 SLAPAERY---DIIIDFTAYEGESIILANS 137 (174)
T ss_dssp EECTTCEE---EEEEECGGGTTCEEEEEEC
T ss_pred EEcCCcEE---EEEEECCCCCCceEEEEcc
Confidence 47899987 6666666677877765443
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=82.36 E-value=0.37 Score=37.67 Aligned_cols=43 Identities=21% Similarity=0.368 Sum_probs=32.9
Q ss_pred cCccEEeCCCcEEEEEEEEeccccCCCCCCCCCCCCc-eEEeeccccccccCcccceEE
Q 008840 492 WKNVYKITPGYVTRILVRFSYVHANASYPFDATAEPG-YVYHCHILDHEDNIMMRPLKL 549 (551)
Q Consensus 492 wkDTV~v~pg~~v~i~~~f~~~~~~~~~p~~~~~~pg-~~~HCHiL~HED~GMM~~~~V 549 (551)
..+.....+++...+.+... ..+| |-|+|-. |...||.+.|.|
T Consensus 60 ~~~~~~~~~~~~~~~~f~~~-------------~~~G~y~y~C~~--H~~~GM~G~I~V 103 (105)
T d2cj3a1 60 SHKQLLMSPGQSTSTTFPAD-------------APAGEYTFYCEP--HRGAGMVGKITV 103 (105)
T ss_dssp CEEEEECSTTCEEEEECCTT-------------CCSEEEEEECTT--TGGGTCEEEEEE
T ss_pred cccccccCCCcceEEEEEec-------------cCCceEEEEeCC--CcCCCcEEEEEE
Confidence 46777888888888744321 1567 9999964 999999999987
|