Citrus Sinensis ID: 008849

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-
MSTSNLYCSSMALLVREPQGGSCLHFVKPFSADGCLSIKNVGRIKTAALVSGEGDVISYPNNNKKYTAIETQSDTIGFGTLGAEITPKTSDFFPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYGLNSGSHGDGSISDDGNSSIDGSSGGVSET
cccccccccccccccccccccccccccccccccccEEEEccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccEEEEEEcccccccccHHHHcccccHHHHHHHHHHcccEEEccccHHHHHHccccccccccccccccccccEEEEEccccccHHHHHHccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccEEEccccHHHHHHHHHHHcccccEEEEEEEccccccccHHHHHHHHHHccccEEEHHHHHHHHHHcccEEEEEEEEccccccccEEEEEEEEcccccEEEEEEccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHccEEEEEEcccccccccHHHHHHHHHHHHcccccHHHHHHccccccccHHHHHHHHHHHcccccEEEccccHHHHccccccccEEEEEEEccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
ccccccccccEEEEEcccccccEcccccEccccccEEEcccccEEEEEEEcccccEcEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccEEEEccccccccEEEEEEHHHccHHHHHHHHHHEccccEEEEcHHHHHHccccEcccccccccccccEEEEEEccccccccEEEEEEHHHHHccccccccHHHHHHHHHHHHcccccHHHEEEEEEEEEEEccccHHHccccHHHHHHHHHHHcccccEEEEEEEEEcccccccHHHHHHHHHHccccEEEHHHHHHHHHHHccHEEEEEEEccccccccEEEEEEEEEEcccEEEEEEEccccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHHHHccccHHHHHHHccccHcHHHHcHHHHHHHHHcccEEEEEEccccHEEccccccEEEEccccEEEcccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
MSTSNLYCSSMALLvrepqggsclhfvkpfsadgclsiknvgrIKTAALVsgegdvisypnnnkkytaietqsdtigfgtlgaeitpktsdffpnddefdldrptkgfASISEAIEDIRQGKLVIVVddedrenegdlimaaslvtPEAMAFIVRHGTGIVcvsmkgedlerlelplmvnhkdneeKLCTAFTVSVVLEMGSETCFLILLKEdakygtttgvsanDRAKTVLALAcrdskpedfnrpghifplkyreggvlkraghteaSVDLAVLAGLEPVAVLCEIvdddgsmarlpkLRQFAQTENLKIISIADLIRYRRKRDRLVELAaaapiptmwgpfkaHCYRSLLDGIEHIAMVkgeigdgqDILVRVHSecltgdifgsarcdCGNQLALAMKQIEAAGRGVLVYLRghegrgiglghklraynlqddghdtveaneelglpvdsreygigAQILRDLGVRTMklmtnnpskyvglkgyglaiagriplltpitmENKRYLETKRAkmghvyglnsgshgdgsisddgnssidgssggvset
MSTSNLYCSSMALLVREPQGGSCLHFVKPFSADGCLSIKNVGRIKTAALvsgegdvisypnNNKKYTAIETQSDTIGFGTLGAEITPKTSDFFPNDDEFDLDRPTKGFASISEaiedirqgklVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKygtttgvsandraKTVLALAcrdskpedfnrpghifpLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLrqfaqtenlkiisiadliRYRRKRDRLVELAAaapiptmwgpfKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEElglpvdsreygIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRiplltpitMENKRYLETKRAKMGHVYGLNSGShgdgsisddgnssidgssggvset
MSTSNLYCSSMALLVREPQGGSCLHFVKPFSADGCLSIKNVGRIKTAALVSGEGDVISYPNNNKKYTAIETQSDTIGFGTLGAEITPKTSDFFPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYGLnsgshgdgsisddgnssidgssggVSET
*****LYCSSMALLVREPQGGSCLHFVKPFSADGCLSIKNVGRIKTAALVSGEGDVISYPNNNKKYTAIETQSDTIGFGTLGAEITPKTSDFFP****FDL***TKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAKTVLALACRDS**EDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYG*****************************
**********************************CLSIKNVGRIKT************************************************************GFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYGL****************************
MSTSNLYCSSMALLVREPQGGSCLHFVKPFSADGCLSIKNVGRIKTAALVSGEGDVISYPNNNKKYTAIETQSDTIGFGTLGAEITPKTSDFFPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYGLNSGSHGDGSISDDG**************
***SNLYCSSMALLVREPQGGSCLHFVKPFSADGCLSIKNVGRIKTAALVSGEGDVISYPN***************************TSD**P*DDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYGL****************************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSTSNLYCSSMALLVREPQGGSCLHFVKPFSADGCLSIKNVGRIKTAALVSGEGDVISYPNNNKKYTAIETQSDTIGFGTLGAEITPKTSDFFPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYGLNSGSHGDGSISDDGNSSIDGSSGGVSET
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query551 2.2.26 [Sep-21-2011]
P47924543 Riboflavin biosynthesis p yes no 0.856 0.869 0.762 0.0
Q0AXM5398 Riboflavin biosynthesis p yes no 0.711 0.984 0.574 1e-130
O66679406 Riboflavin biosynthesis p yes no 0.722 0.980 0.565 1e-130
A4X639400 Riboflavin biosynthesis p yes no 0.720 0.992 0.539 1e-128
C0ZKW2399 Riboflavin biosynthesis p yes no 0.720 0.994 0.570 1e-128
Q9Z734418 Riboflavin biosynthesis p yes no 0.727 0.959 0.544 1e-127
Q5WH08397 Riboflavin biosynthesis p yes no 0.718 0.997 0.545 1e-127
A8LY38420 Riboflavin biosynthesis p yes no 0.716 0.940 0.542 1e-127
A0Q3H7414 Riboflavin biosynthesis p yes no 0.738 0.983 0.522 1e-126
Q5YTP3414 Riboflavin biosynthesis p yes no 0.715 0.951 0.562 1e-126
>sp|P47924|RIBBA_ARATH Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2 Back     alignment and function desciption
 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/500 (76%), Positives = 421/500 (84%), Gaps = 28/500 (5%)

Query: 35  CLSIK-NVGRIKTAALVSGEGDVISYPNNNKKY---------TAIETQSDTIGFGTLGAE 84
             SIK N G++K AA++S E D++S+ N N            T    ++D++  GTL A+
Sbjct: 45  TFSIKTNTGKVK-AAVISREDDLLSFTNGNTPLSNGSLIDDRTEEPLEADSVSLGTLAAD 103

Query: 85  ITPKTSD-FFPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAAS 143
             P  ++ F   DD+F+LD PT GF+SI EAIEDIRQGKLV+VVDDEDRENEGDL+MAA 
Sbjct: 104 SAPAPANGFVAEDDDFELDLPTPGFSSIPEAIEDIRQGKLVVVVDDEDRENEGDLVMAAQ 163

Query: 144 LVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSE 203
           L TPEAMAFIVRHGTGIVCVSMK +DLERL LPLMVN K+NEEKL TAFTV+V       
Sbjct: 164 LATPEAMAFIVRHGTGIVCVSMKEDDLERLHLPLMVNQKENEEKLSTAFTVTV------- 216

Query: 204 TCFLILLKEDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKR 263
                    DAK+GTTTGVSA DRA T+L+LA RDSKPEDFNRPGHIFPLKYREGGVLKR
Sbjct: 217 ---------DAKHGTTTGVSARDRATTILSLASRDSKPEDFNRPGHIFPLKYREGGVLKR 267

Query: 264 AGHTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRR 323
           AGHTEASVDL VLAGL+PV VLCEIVDDDGSMARLPKLR+FA   NLK++SIADLIRYRR
Sbjct: 268 AGHTEASVDLTVLAGLDPVGVLCEIVDDDGSMARLPKLREFAAENNLKVVSIADLIRYRR 327

Query: 324 KRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTG 383
           KRD+LVE A+AA IPTMWGPF A+CYRS+LDGIEHIAMVKGEIGDGQDILVRVHSECLTG
Sbjct: 328 KRDKLVERASAARIPTMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDILVRVHSECLTG 387

Query: 384 DIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVE 443
           DIFGSARCDCGNQLAL+M+QIEA GRGVLVYLRGHEGRGIGLGHKLRAYNLQD G DTVE
Sbjct: 388 DIFGSARCDCGNQLALSMQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVE 447

Query: 444 ANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPIT 503
           ANEELGLPVDSREYGIGAQI+RDLGVRTMKLMTNNP+KYVGLKGYGLAI GR+PLL+ IT
Sbjct: 448 ANEELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLSLIT 507

Query: 504 MENKRYLETKRAKMGHVYGL 523
            ENKRYLETKR KMGH+YGL
Sbjct: 508 KENKRYLETKRTKMGHMYGL 527
Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: 2EC: 5
>sp|Q0AXM5|RIBBA_SYNWW Riboflavin biosynthesis protein RibBA OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|O66679|RIBBA_AQUAE Riboflavin biosynthesis protein RibBA OS=Aquifex aeolicus (strain VF5) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|A4X639|RIBBA_SALTO Riboflavin biosynthesis protein RibBA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|C0ZKW2|RIBBA_BREBN Riboflavin biosynthesis protein RibBA OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|Q9Z734|RIBBA_CHLPN Riboflavin biosynthesis protein RibBA OS=Chlamydia pneumoniae GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|Q5WH08|RIBBA_BACSK Riboflavin biosynthesis protein RibBA OS=Bacillus clausii (strain KSM-K16) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|A8LY38|RIBBA_SALAI Riboflavin biosynthesis protein RibBA OS=Salinispora arenicola (strain CNS-205) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|A0Q3H7|RIBBA_CLONN Riboflavin biosynthesis protein RibBA OS=Clostridium novyi (strain NT) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|Q5YTP3|RIBBA_NOCFA Riboflavin biosynthesis protein RibBA OS=Nocardia farcinica (strain IFM 10152) GN=ribBA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query551
255587021531 GTP cyclohydrolase II, putative [Ricinus 0.911 0.945 0.768 0.0
225465770559 PREDICTED: riboflavin biosynthesis prote 0.941 0.928 0.730 0.0
296087438 845 unnamed protein product [Vitis vinifera] 0.941 0.614 0.730 0.0
33308405539 GTP cyclohydrolase II/3,4-dihydroxy-2-bu 0.956 0.977 0.740 0.0
224096145449 predicted protein [Populus trichocarpa] 0.807 0.991 0.859 0.0
359480493534 PREDICTED: riboflavin biosynthesis prote 0.923 0.953 0.734 0.0
298561264557 GTP cyclohydrolase II/3,4-dihydroxy-2-bu 0.885 0.876 0.753 0.0
224055964552 predicted protein [Populus trichocarpa] 0.900 0.898 0.730 0.0
356525856544 PREDICTED: riboflavin biosynthesis prote 0.931 0.943 0.727 0.0
356554732544 PREDICTED: riboflavin biosynthesis prote 0.865 0.876 0.758 0.0
>gi|255587021|ref|XP_002534102.1| GTP cyclohydrolase II, putative [Ricinus communis] gi|223525850|gb|EEF28284.1| GTP cyclohydrolase II, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  823 bits (2126), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/549 (76%), Positives = 453/549 (82%), Gaps = 47/549 (8%)

Query: 1   MSTSNLYCSSMALLVREPQGG-SCLHFVKPFSADG--------------CLSIKNVGRIK 45
           M++  LY SS        QGG   LH   PF+ +               C  +K V R++
Sbjct: 1   MASVYLYISSFN--PSPLQGGYKGLHCAYPFAPNDLTDLVVSSNPTRKLCFGLKGVSRVR 58

Query: 46  TAALVSGEGDVISYPNNN----------KKYT---AIETQSDTIGFGTLGAEITPKTSDF 92
            A+LVSGEGD++S  NNN           K+     +E Q D IGFGTL AEITP TS F
Sbjct: 59  -ASLVSGEGDLLSCHNNNGAPGQDTIVSNKFNPSPGLELQPDAIGFGTLSAEITPTTSAF 117

Query: 93  FPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAF 152
           FP+DDE+DLD PT GFASI EAIEDIRQGKLVIVVDDEDRENEGDLIMAAS  TPE MAF
Sbjct: 118 FPDDDEYDLDHPTDGFASIPEAIEDIRQGKLVIVVDDEDRENEGDLIMAASKATPEVMAF 177

Query: 153 IVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKE 212
           IV+HGTGIVCVSMKGEDLERLELPLMV HK+NEEKLCTAFTV+V                
Sbjct: 178 IVKHGTGIVCVSMKGEDLERLELPLMVTHKENEEKLCTAFTVTV---------------- 221

Query: 213 DAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVD 272
           DAK+GTTTGVSA+DRA TVLALA RDSKP DFNRPGHIFPLKYREGGVLKRAGHTEASVD
Sbjct: 222 DAKHGTTTGVSAHDRAATVLALASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVD 281

Query: 273 LAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVELA 332
           L++LAGLEPVAVLCEIVDDDGSMARLP+LRQFAQTENLKIISIADLIRYRRKRDRLVELA
Sbjct: 282 LSMLAGLEPVAVLCEIVDDDGSMARLPRLRQFAQTENLKIISIADLIRYRRKRDRLVELA 341

Query: 333 AAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCD 392
           A APIPTMWGPF+A+CYRSLLDGIEHIAMVKGEIGDG+DILVRVHSECLTGDIFGSARCD
Sbjct: 342 ATAPIPTMWGPFEAYCYRSLLDGIEHIAMVKGEIGDGKDILVRVHSECLTGDIFGSARCD 401

Query: 393 CGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPV 452
           CGNQLALAM QIEAAGRG+LVYLRGHEGRGIGLGHKLRA NLQDDG DTVEANEELGLPV
Sbjct: 402 CGNQLALAMTQIEAAGRGILVYLRGHEGRGIGLGHKLRACNLQDDGRDTVEANEELGLPV 461

Query: 453 DSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLET 512
           DSREYG+GAQILRDLGV TM+LMTNNP+KYVGLKGYGLAIAGR+PLLTPIT EN RYLET
Sbjct: 462 DSREYGLGAQILRDLGVHTMRLMTNNPAKYVGLKGYGLAIAGRVPLLTPITRENMRYLET 521

Query: 513 KRAKMGHVY 521
           KR KMGH+Y
Sbjct: 522 KREKMGHIY 530

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225465770|ref|XP_002267374.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296087438|emb|CBI34027.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|33308405|gb|AAQ03091.1| GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase [Malus x domestica] Back     alignment and taxonomy information
>gi|224096145|ref|XP_002310549.1| predicted protein [Populus trichocarpa] gi|222853452|gb|EEE90999.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359480493|ref|XP_002266093.2| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like [Vitis vinifera] gi|297741836|emb|CBI33149.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|298561264|dbj|BAJ09646.1| GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase [Nicotiana benthamiana] Back     alignment and taxonomy information
>gi|224055964|ref|XP_002298707.1| predicted protein [Populus trichocarpa] gi|222845965|gb|EEE83512.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356525856|ref|XP_003531537.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356554732|ref|XP_003545697.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query551
TAIR|locus:2173373543 GCH "GTP cyclohydrolase II" [A 0.852 0.865 0.765 3.8e-197
TAIR|locus:2041253476 RIBA2 "homolog of ribA 2" [Ara 0.774 0.897 0.718 3e-165
TIGR_CMR|CHY_1473401 CHY_1473 "3,4-dihydroxy-2-buta 0.553 0.760 0.620 1.3e-126
TIGR_CMR|GSU_1690400 GSU_1690 "3,4-dihydroxy-2-buta 0.569 0.785 0.558 2.9e-118
TIGR_CMR|BA_4333397 BA_4333 "3,4-dihydroxy-2-butan 0.553 0.768 0.588 6.9e-115
UNIPROTKB|P0A5V0425 ribBA "Riboflavin biosynthesis 0.711 0.922 0.550 7.6e-112
TIGR_CMR|DET_1188403 DET_1188 "3,4-dihydroxy-2-buta 0.604 0.826 0.532 4.3e-111
TIGR_CMR|CBU_0647387 CBU_0647 "riboflavin biosynthe 0.575 0.819 0.518 2.9e-97
UNIPROTKB|Q9KPU3369 VC_2269 "3,4-dihydroxy-2-butan 0.495 0.739 0.451 3.2e-75
TIGR_CMR|VC_2269369 VC_2269 "3,4-dihydroxy-2-butan 0.495 0.739 0.451 3.2e-75
TAIR|locus:2173373 GCH "GTP cyclohydrolase II" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1909 (677.1 bits), Expect = 3.8e-197, P = 3.8e-197
 Identities = 381/498 (76%), Positives = 421/498 (84%)

Query:    37 SIK-NVGRIKTAALVSGEGDVISYPNNNKKY---------TAIETQSDTIGFGTLGAEIT 86
             SIK N G++K AA++S E D++S+ N N            T    ++D++  GTL A+  
Sbjct:    47 SIKTNTGKVK-AAVISREDDLLSFTNGNTPLSNGSLIDDRTEEPLEADSVSLGTLAADSA 105

Query:    87 PKTSD-FFPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLV 145
             P  ++ F   DD+F+LD PT GF+SI EAIEDIRQGKLV+VVDDEDRENEGDL+MAA L 
Sbjct:   106 PAPANGFVAEDDDFELDLPTPGFSSIPEAIEDIRQGKLVVVVDDEDRENEGDLVMAAQLA 165

Query:   146 TPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETC 205
             TPEAMAFIVRHGTGIVCVSMK +DLERL LPLMVN K+NEEKL TAFTV+V         
Sbjct:   166 TPEAMAFIVRHGTGIVCVSMKEDDLERLHLPLMVNQKENEEKLSTAFTVTV--------- 216

Query:   206 FLILLKEDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAG 265
                    DAK+GTTTGVSA DRA T+L+LA RDSKPEDFNRPGHIFPLKYREGGVLKRAG
Sbjct:   217 -------DAKHGTTTGVSARDRATTILSLASRDSKPEDFNRPGHIFPLKYREGGVLKRAG 269

Query:   266 HTEASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKR 325
             HTEASVDL VLAGL+PV VLCEIVDDDGSMARLPKLR+FA   NLK++SIADLIRYRRKR
Sbjct:   270 HTEASVDLTVLAGLDPVGVLCEIVDDDGSMARLPKLREFAAENNLKVVSIADLIRYRRKR 329

Query:   326 DRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDI 385
             D+LVE A+AA IPTMWGPF A+CYRS+LDGIEHIAMVKGEIGDGQDILVRVHSECLTGDI
Sbjct:   330 DKLVERASAARIPTMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDILVRVHSECLTGDI 389

Query:   386 FGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEAN 445
             FGSARCDCGNQLAL+M+QIEA GRGVLVYLRGHEGRGIGLGHKLRAYNLQD G DTVEAN
Sbjct:   390 FGSARCDCGNQLALSMQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEAN 449

Query:   446 EELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAIAGRIPLLTPITME 505
             EELGLPVDSREYGIGAQI+RDLGVRTMKLMTNNP+KYVGLKGYGLAI GR+PLL+ IT E
Sbjct:   450 EELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLSLITKE 509

Query:   506 NKRYLETKRAKMGHVYGL 523
             NKRYLETKR KMGH+YGL
Sbjct:   510 NKRYLETKRTKMGHMYGL 527
GO:0003935 "GTP cyclohydrolase II activity" evidence=IEA;IGI;ISS
GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate synthase activity" evidence=IEA;IGI;ISS
GO:0009231 "riboflavin biosynthetic process" evidence=IEA;IGI;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016020 "membrane" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0048767 "root hair elongation" evidence=RCA
TAIR|locus:2041253 RIBA2 "homolog of ribA 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1473 CHY_1473 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1690 GSU_1690 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4333 BA_4333 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|P0A5V0 ribBA "Riboflavin biosynthesis protein RibBA" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1188 DET_1188 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0647 CBU_0647 "riboflavin biosynthesis protein RibA" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KPU3 VC_2269 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2269 VC_2269 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9PLJ5RIBBA_CHLMU3, ., 5, ., 4, ., 2, 50.50840.71680.9316yesno
B0KAI2RIBBA_THEP33, ., 5, ., 4, ., 2, 50.53620.70780.9848yesno
C5D3N0RIBBA_GEOSW3, ., 5, ., 4, ., 2, 50.53990.71320.9899yesno
B0K0Y9RIBBA_THEPX3, ., 5, ., 4, ., 2, 50.53620.70780.9848yesno
C3LIX7RIBBA_BACAC3, ., 5, ., 4, ., 2, 50.54560.71860.9974yesno
Q5WH08RIBBA_BACSK3, ., 5, ., 4, ., 2, 50.54560.71860.9974yesno
C3P7P7RIBBA_BACAA3, ., 5, ., 4, ., 2, 50.54560.71860.9974yesno
A4TC13RIBBA_MYCGI3, ., 5, ., 4, ., 2, 50.52800.74220.9669yesno
Q635H0RIBBA_BACCZ3, ., 5, ., 4, ., 2, 50.54560.71860.9974yesno
Q5YTP3RIBBA_NOCFA3, ., 5, ., 4, ., 2, 50.56280.71500.9516yesno
A0RIB3RIBBA_BACAH3, ., 5, ., 4, ., 2, 50.54560.71860.9974yesno
B7IWM5RIBBA_BACC23, ., 5, ., 4, ., 2, 50.54320.71860.9974yesno
A4QEG9RIBBA_CORGB3, ., 5, ., 4, ., 2, 50.54580.70960.9265yesno
A5U2B7RIBBA_MYCTA3, ., 5, ., 4, ., 2, 50.55040.71140.9223yesno
C0ZKW2RIBBA_BREBN3, ., 5, ., 4, ., 2, 50.57070.72050.9949yesno
P0A5V0RIBBA_MYCTU3, ., 5, ., 4, ., 2, 50.55040.71140.9223yesno
P0A5V1RIBBA_MYCBO3, ., 5, ., 4, ., 2, 50.55040.71140.9223yesno
A4SFY4RIBBA_PROVI3, ., 5, ., 4, ., 2, 50.53080.73320.9853yesno
A4X639RIBBA_SALTO3, ., 5, ., 4, ., 2, 50.53970.72050.9925yesno
Q818X6RIBBA_BACCR3, ., 5, ., 4, ., 2, 50.54320.71860.9974yesno
Q9Z734RIBBA_CHLPN3, ., 5, ., 4, ., 2, 50.54410.72770.9593yesno
B7JLW6RIBBA_BACC03, ., 5, ., 4, ., 2, 50.54320.71860.9974yesno
A1KIK4RIBBA_MYCBP3, ., 5, ., 4, ., 2, 50.55040.71140.9223yesno
C1AN60RIBBA_MYCBT3, ., 5, ., 4, ., 2, 50.55040.71140.9223yesno
O66679RIBBA_AQUAE3, ., 5, ., 4, ., 2, 50.56520.72230.9802yesno
B7HAY4RIBBA_BACC43, ., 5, ., 4, ., 2, 50.54080.71860.9974yesno
P47924RIBBA_ARATH3, ., 5, ., 4, ., 2, 50.7620.85660.8692yesno
C1EQY5RIBBA_BACC33, ., 5, ., 4, ., 2, 50.54560.71860.9974yesno
B7HNM8RIBBA_BACC73, ., 5, ., 4, ., 2, 50.54320.71860.9974yesno
Q3B2I6RIBBA_PELLD3, ., 5, ., 4, ., 2, 50.54800.72230.9731yesno
P17620RIBBA_BACSU3, ., 5, ., 4, ., 2, 50.52890.71320.9874yesno
Q0AXM5RIBBA_SYNWW3, ., 5, ., 4, ., 2, 50.57480.71140.9849yesno
A8LY38RIBBA_SALAI3, ., 5, ., 4, ., 2, 50.54230.71680.9404yesno
Q8NQ52RIBBA_CORGL3, ., 5, ., 4, ., 2, 50.54580.70960.9265yesno
B9IWX4RIBBA_BACCQ3, ., 5, ., 4, ., 2, 50.54320.71860.9974yesno
A9VG50RIBBA_BACWK3, ., 5, ., 4, ., 2, 50.54560.71860.9974yesno
B1MCA4RIBBA_MYCA93, ., 5, ., 4, ., 2, 50.55110.73500.9712yesno
A1T8K1RIBBA_MYCVP3, ., 5, ., 4, ., 2, 50.54800.71140.9267yesno
Q0S0K2RIBBA_RHOSR3, ., 5, ., 4, ., 2, 50.55740.71500.9448yesno
C0ZZE5RIBBA_RHOE43, ., 5, ., 4, ., 2, 50.55740.71500.9292yesno
A0Q3H7RIBBA_CLONN3, ., 5, ., 4, ., 2, 50.52210.73860.9830yesno
B2HP67RIBBA_MYCMM3, ., 5, ., 4, ., 2, 50.55760.71140.9223yesno
Q81MB6RIBBA_BACAN3, ., 5, ., 4, ., 2, 50.54560.71860.9974yesno
Q731I5RIBBA_BACC13, ., 5, ., 4, ., 2, 50.54320.71860.9974yesno
A7GSD5RIBBA_BACCN3, ., 5, ., 4, ., 2, 50.53120.71860.9974yesno
A0QI09RIBBA_MYCA13, ., 5, ., 4, ., 2, 50.55280.71140.9223yesno
A0PPL6RIBBA_MYCUA3, ., 5, ., 4, ., 2, 50.55520.71140.9223yesno
Q6HE54RIBBA_BACHK3, ., 5, ., 4, ., 2, 50.54560.71860.9974yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer4.1.99.120.991
3rd Layer3.5.40.976
3rd Layer4.1.990.976
3rd Layer3.5.4.250.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.VII.1682.1
GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase (EC-3.5.4.25) (449 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.VII.325.1
6,7-dimethyl-8-ribityllumazine synthase (180 aa)
• •  •• 0.991
gw1.II.3064.1
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC-3.5.4.26) (316 aa)
• •  •• 0.986
eugene3.01700021
6,7-dimethyl-8-ribityllumazine synthase (221 aa)
• •  •• 0.984
estExt_fgenesh4_pg.C_LG_I0458
hypothetical protein (204 aa)
     •• 0.809
eugene3.00031452
hypothetical protein (211 aa)
     •• 0.802
gw1.XVIII.1081.1
annotation not avaliable (148 aa)
     •  0.800
gw1.XVI.2051.1
annotation not avaliable (265 aa)
     •  0.800
gw1.XV.93.1
hypothetical protein (1112 aa)
     •  0.800
gw1.XV.3381.1
hypothetical protein (519 aa)
     •  0.800
gw1.XII.1350.1
hypothetical protein (612 aa)
     •  0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query551
PLN02831450 PLN02831, PLN02831, Bifunctional GTP cyclohydrolas 0.0
PRK09311402 PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-b 0.0
PRK09319 555 PRK09319, PRK09319, bifunctional 3,4-dihydroxy-2-b 0.0
PRK14019367 PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-b 1e-134
cd00641193 cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (R 1e-110
PRK09318387 PRK09318, PRK09318, bifunctional 3,4-dihydroxy-2-b 1e-107
pfam00926193 pfam00926, DHBP_synthase, 3,4-dihydroxy-2-butanone 1e-103
PRK09314339 PRK09314, PRK09314, bifunctional 3,4-dihydroxy-2-b 1e-100
COG0108203 COG0108, RibB, 3,4-dihydroxy-2-butanone 4-phosphat 1e-99
pfam00925169 pfam00925, GTP_cyclohydro2, GTP cyclohydrolase II 8e-95
COG0807193 COG0807, RibA, GTP cyclohydrolase II [Coenzyme met 3e-94
PRK00393197 PRK00393, ribA, GTP cyclohydrolase II; Reviewed 1e-91
PRK12485369 PRK12485, PRK12485, bifunctional 3,4-dihydroxy-2-b 3e-90
TIGR00506199 TIGR00506, ribB, 3,4-dihydroxy-2-butanone 4-phosph 1e-80
TIGR00505191 TIGR00505, ribA, GTP cyclohydrolase II 7e-79
PRK03353217 PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phospha 2e-78
PRK01792214 PRK01792, ribB, 3,4-dihydroxy-2-butanone 4-phospha 5e-70
PRK00910218 PRK00910, ribB, 3,4-dihydroxy-2-butanone 4-phospha 5e-59
PRK00014230 PRK00014, ribB, 3,4-dihydroxy-2-butanone 4-phospha 1e-57
PRK08815375 PRK08815, PRK08815, GTP cyclohydrolase; Provisiona 2e-50
PRK05773219 PRK05773, PRK05773, 3,4-dihydroxy-2-butanone 4-pho 1e-20
PRK07198418 PRK07198, PRK07198, hypothetical protein; Validate 2e-05
>gnl|CDD|215445 PLN02831, PLN02831, Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase Back     alignment and domain information 
 Score =  889 bits (2299), Expect = 0.0
 Identities = 365/466 (78%), Positives = 402/466 (86%), Gaps = 17/466 (3%)

Query: 74  DTIGFGTLGAEITPKTSDFFPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRE 133
           D+  FGTL AEITP T DFF +D E D DRPT+GF+SI+EA+EDIRQGK V+VVDDEDRE
Sbjct: 1   DSASFGTLAAEITPTTDDFFVSDAEGDPDRPTEGFSSIAEALEDIRQGKFVVVVDDEDRE 60

Query: 134 NEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFT 193
           NEGDLIMAASLVTPEAMAF+V+HG+GIVCVSMKGEDL+RL LPLMV  K+NEEK+ TAFT
Sbjct: 61  NEGDLIMAASLVTPEAMAFLVKHGSGIVCVSMKGEDLDRLRLPLMVPSKENEEKMATAFT 120

Query: 194 VSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPL 253
           V+V                DAK+GTTTGVSA+DRAKT+LALA  DSKPEDF RPGHIFPL
Sbjct: 121 VTV----------------DAKHGTTTGVSASDRAKTILALASPDSKPEDFRRPGHIFPL 164

Query: 254 KYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDD-DGSMARLPKLRQFAQTENLKI 312
           +YREGGVLKRAGHTEA+VDLAVLAGL PV VLCEIV+D DGSMARLP+LR+FA+   LKI
Sbjct: 165 RYREGGVLKRAGHTEAAVDLAVLAGLPPVGVLCEIVNDEDGSMARLPQLRKFAEEHGLKI 224

Query: 313 ISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDI 372
           ISIADLIRYRRKR++LVE  A A +PT WG F A+CYRS LDGIEHIA VKG+IGDGQD+
Sbjct: 225 ISIADLIRYRRKREKLVERTAVARLPTKWGLFTAYCYRSKLDGIEHIAFVKGDIGDGQDV 284

Query: 373 LVRVHSECLTGDIFGSARCDCGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAY 432
           LVRVHSECLTGDIFGSARCDCGNQLALAM+ IE AGRGVLVYLRGHEGRGIGLGHKLRAY
Sbjct: 285 LVRVHSECLTGDIFGSARCDCGNQLALAMQLIEKAGRGVLVYLRGHEGRGIGLGHKLRAY 344

Query: 433 NLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNNPSKYVGLKGYGLAI 492
           NLQD+G DTVEANEELGLPVDSREYGIGAQILRDLGVRTM+LMTNNP+KY GLKGYGLA+
Sbjct: 345 NLQDEGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMRLMTNNPAKYTGLKGYGLAV 404

Query: 493 AGRIPLLTPITMENKRYLETKRAKMGHVYGLNSGSHGDGSISDDGN 538
            GR+PLLTPIT ENKRYLETKR KMGHVYG + G H  G  S + N
Sbjct: 405 VGRVPLLTPITKENKRYLETKRTKMGHVYGSDLGGHVSGLESAETN 450

Length = 450
>gnl|CDD|181774 PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>gnl|CDD|236465 PRK09319, PRK09319, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|237587 PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>gnl|CDD|238348 cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA) Back     alignment and domain information
>gnl|CDD|236464 PRK09318, PRK09318, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>gnl|CDD|216197 pfam00926, DHBP_synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase Back     alignment and domain information
>gnl|CDD|181775 PRK09314, PRK09314, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>gnl|CDD|223186 COG0108, RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|216196 pfam00925, GTP_cyclohydro2, GTP cyclohydrolase II Back     alignment and domain information
>gnl|CDD|223878 COG0807, RibA, GTP cyclohydrolase II [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|234745 PRK00393, ribA, GTP cyclohydrolase II; Reviewed Back     alignment and domain information
>gnl|CDD|171535 PRK12485, PRK12485, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>gnl|CDD|232999 TIGR00506, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Back     alignment and domain information
>gnl|CDD|129596 TIGR00505, ribA, GTP cyclohydrolase II Back     alignment and domain information
>gnl|CDD|235119 PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|167278 PRK01792, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|179162 PRK00910, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|134031 PRK00014, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|236340 PRK08815, PRK08815, GTP cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|235601 PRK05773, PRK05773, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Validated Back     alignment and domain information
>gnl|CDD|235959 PRK07198, PRK07198, hypothetical protein; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 551
PLN02831450 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy- 100.0
PRK09319 555 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK09311402 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK09318387 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK12485369 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK14019367 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK09314339 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK08815375 GTP cyclohydrolase; Provisional 100.0
COG0108203 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK00910218 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK01792214 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK00014230 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
TIGR00506199 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
KOG1284357 consensus Bifunctional GTP cyclohydrolase II/3,4-d 100.0
PF00926194 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphat 100.0
COG0807193 RibA GTP cyclohydrolase II [Coenzyme metabolism] 100.0
PRK03353217 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK05773219 3,4-dihydroxy-2-butanone 4-phosphate synthase; Val 100.0
PRK00393197 ribA GTP cyclohydrolase II; Reviewed 100.0
TIGR00505191 ribA GTP cyclohydrolase II. Several members of the 100.0
PF00925169 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: 100.0
cd00641193 GTP_cyclohydro2 GTP cyclohydrolase II (RibA). GTP 100.0
PRK07198418 hypothetical protein; Validated 100.0
KOG1284357 consensus Bifunctional GTP cyclohydrolase II/3,4-d 99.65
>PLN02831 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase Back     alignment and domain information 
Probab=100.00  E-value=4e-139  Score=1110.81  Aligned_cols=444  Identities=82%  Similarity=1.270  Sum_probs=432.5

Q ss_pred             cccccccccccccCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHcCcEEEEEeCCCCCCceeEEEEcCCCCHHHHHHH
Q 008849           74 DTIGFGTLGAEITPKTSDFFPNDDEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFI  153 (551)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~Ai~aLr~G~~Viv~Dde~rEnEgdLv~aAe~vT~e~v~fm  153 (551)
                      |+.+|||+++|++|++++||..+.+.+.+.+.+.|++|++||++||+|+||||+||++||||||||+|||++|||.||||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~ai~~lr~G~~Viv~Dd~~rEnegdLv~aAe~~t~e~v~fm   80 (450)
T PLN02831          1 DSASFGTLAAEITPTTDDFFVSDAEGDPDRPTEGFSSIAEALEDIRQGKFVVVVDDEDRENEGDLIMAASLVTPEAMAFL   80 (450)
T ss_pred             CCccccccccCCcccccccccccccccccCcccccCcHHHHHHHHHCCCeEEEEeCCCCCCceeEEEEchhCCHHHHHHH
Confidence            57899999999999999999999999999996679999999999999999999999999999999999999999999999


Q ss_pred             HHhCCccEEeecChhhHhhcCCCcccccCCCccccccceEEEEEeccCcchhhhhhhcccccCCCcccCChhhHHHHHHH
Q 008849          154 VRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAKTVLA  233 (551)
Q Consensus       154 ~r~~~Glicval~~e~~~rL~Lp~m~~~~~n~~~~~taFtvsV~~~~~~~~~~~~~~~~Da~~gttTGISA~DRA~TIr~  233 (551)
                      ++|++|+||++|++++|++|+||+|+....|++..+++|||||                |++.|++|||||.|||+|||+
T Consensus        81 ~~~~~GliC~~lt~~ra~~L~Lp~m~~~~~n~~~~~t~ftvsV----------------d~~~g~~TGISa~dRa~Tir~  144 (450)
T PLN02831         81 VKHGSGIVCVSMKGEDLDRLRLPLMVPSKENEEKMATAFTVTV----------------DAKHGTTTGVSASDRAKTILA  144 (450)
T ss_pred             HHhCCCceEEecCHHHHhhcCCCcccccccCCcccCCCceEEE----------------ecCCCcccccchHHHHHHHHH
Confidence            9999999999999999999999999986557777889999999                998899999999999999999


Q ss_pred             HhcCCCCCCCccCCCCcccceeccCCcccccChhHHHHHHHHHcCCCceEEEEEEeCC-CCCcCChhHHHHHHHhcCCce
Q 008849          234 LACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCEIVDD-DGSMARLPKLRQFAQTENLKI  312 (551)
Q Consensus       234 LAdp~s~p~Df~rPGHVfPL~a~~gGvl~R~GhTEAAvDLarlAGl~PaaVicEi~~~-dG~mar~~~l~~fA~~h~L~i  312 (551)
                      ||+|.++|.||++|||||||++++|||++|+|||||||||||||||.||+|||||+++ ||+||+.+++.+||++|+||+
T Consensus       145 lad~~~~~~df~~PGHvfPL~a~~ggvl~R~GhtEaavdLarlAgl~Paavi~Ei~~~~dG~m~~~~~~~~fA~~h~L~~  224 (450)
T PLN02831        145 LASPDSKPEDFRRPGHIFPLRYREGGVLKRAGHTEAAVDLAVLAGLPPVGVLCEIVNDEDGSMARLPQLRKFAEEHGLKI  224 (450)
T ss_pred             HhCcCCChhhcCCCCcccceeecccCccCCCChHHHHHHHHHHcCCCceEEEEEeccCCCCCccChHHHHHHHHHcCCcE
Confidence            9999999999999999999999999999999999999999999999999999999995 999999999999999999999


Q ss_pred             ecHHHHHHHHHhhhhhhhhccccccCCCcccEEEEEEEecCCCceEEEEEeccCCCCCcceEEEccCCcccccccCCCCC
Q 008849          313 ISIADLIRYRRKRDRLVELAAAAPIPTMWGPFKAHCYRSLLDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCD  392 (551)
Q Consensus       313 vsi~DLi~yr~~~E~lVer~~~~~lpT~~G~F~~~~Yr~~~dg~EHlALv~Gdi~~~~~vLVRVHSeCltGDvFgS~rCD  392 (551)
                      ++|+|||+||+++|++|+++++.++||.||+|++++|++..++.||+||++|++.+++||||||||+|+|||+|||.+||
T Consensus       225 v~i~dli~yr~~~e~lV~rv~~~~lpT~~G~F~~~~yr~~~~g~eHlALv~Gd~~~~~~vLVRVHSec~tgDvfgs~rCd  304 (450)
T PLN02831        225 ISIADLIRYRRKREKLVERTAVARLPTKWGLFTAYCYRSKLDGIEHIAFVKGDIGDGQDVLVRVHSECLTGDIFGSARCD  304 (450)
T ss_pred             EEHHHHHHHHhhccccccccceeeeecCCCCEEEEEEEeCCCCeEEEEEEeCCcCCCCCceEEEeccCCHHHHhcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHhCCeEEEEEeCCCCCCcchhhhhhhhhcccCCCCchhhhhhcCCCCCCcChhHHHHHHHHcCCCee
Q 008849          393 CGNQLALAMKQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTM  472 (551)
Q Consensus       393 Cg~QL~~AL~~I~~~G~GVLVYLr~qEGRGiGL~~Kl~ay~LQd~G~DTveAn~~LG~~~D~RdYgigAQILrdLGV~kv  472 (551)
                      |+|||+.||++|+++|+|||||||+||||||||.+|+++|.+|++|+||++||.+||++.|.|+||+|||||++|||++|
T Consensus       305 Cg~qL~~Al~~I~~~G~GVlvYLr~qegrgigl~~Kl~ay~lq~~g~dt~eAn~~lg~~~D~RdygigAqIL~dLGI~~i  384 (450)
T PLN02831        305 CGNQLALAMQLIEKAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDEGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTM  384 (450)
T ss_pred             CcchHHHHHHHHHHcCCEEEEEEcCCCcccchHHHHHHHHhcccccCcchhhhhhccCcccceehHHHHHHHHHcCCCEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCcccccccccCCeEEEEEeecCCCCChhhHHHHHHHHHhcCCccCCCCCCCCCCcc
Q 008849          473 KLMTNNPSKYVGLKGYGLAIAGRIPLLTPITMENKRYLETKRAKMGHVYGLNSGSHGDGSI  533 (551)
Q Consensus       473 rLLTNNP~K~~aL~g~GIeV~ervpl~~~~~~~n~~YL~tK~~k~gH~l~~~~~~~~~~~~  533 (551)
                      |||||||+|+.+|++|||+|++++|++++++++|++||+||++||||+|..+..+++++.-
T Consensus       385 rLLTNNp~K~~~L~~~GieVve~vp~~~~~~~~n~~Yl~tK~~k~gH~l~~~~~~~~~~~~  445 (450)
T PLN02831        385 RLMTNNPAKYTGLKGYGLAVVGRVPLLTPITKENKRYLETKRTKMGHVYGSDLGGHVSGLE  445 (450)
T ss_pred             EECCCCHHHHHHHhhCCCEEEEEecccCCCChhhHHHHHHHHHHhCCcCCCCCCCcccccc
Confidence            9999999999999999999999999999999999999999999999999999988886643

>PRK09319 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional Back     alignment and domain information
>PRK09311 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>PRK09318 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>PRK12485 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>PRK14019 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>PRK09314 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>PRK08815 GTP cyclohydrolase; Provisional Back     alignment and domain information
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] Back     alignment and domain information
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase Back     alignment and domain information
>KOG1284 consensus Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase [Coenzyme transport and metabolism] Back     alignment and domain information
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4 Back     alignment and domain information
>COG0807 RibA GTP cyclohydrolase II [Coenzyme metabolism] Back     alignment and domain information
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>PRK05773 3,4-dihydroxy-2-butanone 4-phosphate synthase; Validated Back     alignment and domain information
>PRK00393 ribA GTP cyclohydrolase II; Reviewed Back     alignment and domain information
>TIGR00505 ribA GTP cyclohydrolase II Back     alignment and domain information
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin Back     alignment and domain information
>cd00641 GTP_cyclohydro2 GTP cyclohydrolase II (RibA) Back     alignment and domain information
>PRK07198 hypothetical protein; Validated Back     alignment and domain information
>KOG1284 consensus Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase [Coenzyme transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query551
1g57_A217 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 4e-52
1iez_A217 Solution Structure Of 3,4-Dihydroxy-2-Butanone 4-Ph 5e-52
3h07_A220 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 2e-51
3lqu_A217 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 2e-51
3mk5_A212 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 5e-50
3mgz_A206 Crystal Structure Of Dhbps Domain Of Bi-Functional 6e-50
1tks_A204 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 1e-48
2bz0_A196 Crystal Structure Of E. Coli Gtp Cyclohydrolase Ii 1e-44
2bz1_A196 Crystal Structure Of Apo E. Coli Gtp Cyclohydrolase 1e-43
1k49_A233 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 2e-41
1pvw_A227 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From 8e-25
1pvy_A227 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From 1e-23
>pdb|1G57|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Length = 217 Back     alignment and structure 
Iteration: 1

 Score =  202 bits (514), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 99/220 (45%), Positives = 141/220 (64%), Gaps = 18/220 (8%)
Query: 108 FASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKG 167
           F  +  A+  +R+G+ V+V+DDEDRENEGD+I  A  +T E MA  +RHG+GIVC+ +  
Sbjct: 13  FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITE 72
Query: 168 EDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDR 227
           +  ++L+LP+MV  ++N     T FTV++                +A  G TTGVSA DR
Sbjct: 73  DRRKQLDLPMMV--ENNTSAYGTGFTVTI----------------EAAEGVTTGVSAADR 114
Query: 228 AKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVAVLCE 287
             TV A     +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAG +P  VLCE
Sbjct: 115 ITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCE 174
Query: 288 IVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDR 327
           + +DDG+MAR P+  +FA   N+ +++I DL+ YR+  +R
Sbjct: 175 LTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHER 214
>pdb|1IEZ|A Chain A, Solution Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Of Riboflavin Biosynthesis Length = 217 Back     alignment and structure
>pdb|3H07|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From Yersinia Pestis Co92 Length = 220 Back     alignment and structure
>pdb|3LQU|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Complexed With Ribulose-5 Phosphate Length = 217 Back     alignment and structure
>pdb|3MK5|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Domain From Mycobacterium Tuberculosis With Sulfate And Zinc At Ph 4.00 Length = 212 Back     alignment and structure
>pdb|3MGZ|A Chain A, Crystal Structure Of Dhbps Domain Of Bi-Functional DhbpsGTP Cyclohydrolase Ii From Mycobacterium Tuberculosis At Ph 4.0 Length = 206 Back     alignment and structure
>pdb|1TKS|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Of Candida Albicans Length = 204 Back     alignment and structure
>pdb|2BZ0|A Chain A, Crystal Structure Of E. Coli Gtp Cyclohydrolase Ii In Complex With Gtp Analogue, Gmpcpp, And Zinc Length = 196 Back     alignment and structure
>pdb|2BZ1|A Chain A, Crystal Structure Of Apo E. Coli Gtp Cyclohydrolase Ii Length = 196 Back     alignment and structure
>pdb|1K49|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase (Cation Free Form) Length = 233 Back     alignment and structure
>pdb|1PVW|A Chain A, 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From M. Jannaschii Length = 227 Back     alignment and structure
>pdb|1PVY|A Chain A, 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From M. Jannaschii In Complex With Ribulose 5-Phosphate Length = 227 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query551
1g57_A217 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 1e-127
2bz1_A196 GTP cyclohydrolase II; riboflavin biosynthesis, ca 1e-126
1tks_A204 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 1e-126
1k4i_A233 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 1e-125
3mio_A206 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 1e-125
1snn_A227 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 1e-113
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-14
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A Length = 217 Back     alignment and structure
 Score =  369 bits (951), Expect = e-127
 Identities = 100/233 (42%), Positives = 142/233 (60%), Gaps = 18/233 (7%)

Query: 97  DEFDLDRPTKGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRH 156
            +  L      F  +  A+  +R+G+ V+V+DDEDRENEGD+I  A  +T E MA  +RH
Sbjct: 2   AQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRH 61

Query: 157 GTGIVCVSMKGEDLERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKY 216
           G+GIVC+ +  +  ++L+LP+MV +  N     T FTV++                +A  
Sbjct: 62  GSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTI----------------EAAE 103

Query: 217 GTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVL 276
           G TTGVSA DR  TV A     +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  L
Sbjct: 104 GVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTL 163

Query: 277 AGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLV 329
           AG +P  VLCE+ +DDG+MAR P+  +FA   N+ +++I DL+ YR+  +R  
Sbjct: 164 AGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKA 216
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A Length = 196 Back     alignment and structure
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A* Length = 204 Back     alignment and structure
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A Length = 233 Back     alignment and structure
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} PDB: 3mgz_A 3mk5_A Length = 206 Back     alignment and structure
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A Length = 227 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query551
1k4i_A233 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 100.0
3mio_A206 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 100.0
1tks_A204 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 100.0
1snn_A227 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 100.0
1g57_A217 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 100.0
2bz1_A196 GTP cyclohydrolase II; riboflavin biosynthesis, ca 100.0
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A Back     alignment and structure
Probab=100.00  E-value=8e-76  Score=575.79  Aligned_cols=207  Identities=48%  Similarity=0.739  Sum_probs=201.2

Q ss_pred             CCcccHHHHHHHHHcCcEEEEEeCCCCCCceeEEEEcCCCCHHHHHHHHHhCCccEEeecChhhHhhcCCCcccccCCCc
Q 008849          106 KGFASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNE  185 (551)
Q Consensus       106 ~~~~~I~~Ai~aLr~G~~Viv~Dde~rEnEgdLv~aAe~vT~e~v~fm~r~~~Glicval~~e~~~rL~Lp~m~~~~~n~  185 (551)
                      +.|++|++||++||+|++|||+||++||||||||+|||++|||.||||++|++|+||+||++++|++|+||+|+..  |+
T Consensus        10 ~~~~~ie~Ai~alr~G~~Viv~DdedREnEgDLi~aAe~~T~e~i~fm~r~~~GliC~~lt~e~~~~L~Lp~Mv~~--n~   87 (233)
T 1k4i_A           10 SNFDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTH--NA   87 (233)
T ss_dssp             --CCCHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--CC
T ss_pred             CchhHHHHHHHHHHCCCeEEEEeCCCCCcceeEEEEhhhCCHHHHHHHHHcCCCCEEEEcCHHHHhhCCCcccccc--cC
Confidence            4589999999999999999999999999999999999999999999999999999999999999999999999987  88


Q ss_pred             cccccceEEEEEeccCcchhhhhhhcccccC-CCcccCChhhHHHHHHHHhcCCCCCCCccCCCCcccceeccCCccccc
Q 008849          186 EKLCTAFTVSVVLEMGSETCFLILLKEDAKY-GTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRA  264 (551)
Q Consensus       186 ~~~~taFtvsV~~~~~~~~~~~~~~~~Da~~-gttTGISA~DRA~TIr~LAdp~s~p~Df~rPGHVfPL~a~~gGvl~R~  264 (551)
                      +.++|+|||||                |++. |++|||||.|||+||+.|+++.++|.||+||||||||++++||||+|+
T Consensus        88 ~~~~TaFTVsV----------------da~~~g~tTGISA~DRa~Tir~la~~~~~p~df~rPGHvfPL~A~~GGVl~R~  151 (233)
T 1k4i_A           88 DPRGTAYTVSV----------------DAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARR  151 (233)
T ss_dssp             CSSCCCBBCCE----------------EECSTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTHHHHCC
T ss_pred             CCCCCCeEEEE----------------EcccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCccceeeecCCCeeccC
Confidence            89999999999                9987 999999999999999999999999999999999999999999999999


Q ss_pred             ChhHHHHHHHHHcCCCceEEEEEEeCC-----------CCCcCChhHHHHHHHhcCCceecHHHHHHHHHhhhhhhh
Q 008849          265 GHTEASVDLAVLAGLEPVAVLCEIVDD-----------DGSMARLPKLRQFAQTENLKIISIADLIRYRRKRDRLVE  330 (551)
Q Consensus       265 GhTEAAvDLarlAGl~PaaVicEi~~~-----------dG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~~E~lVe  330 (551)
                      |||||||||||||||.|++||||||++           ||+|||++++.+||++||||+|||+|||+||+++|++|+
T Consensus       152 GHTEAaVDLarLAGl~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iitI~dLi~yr~~~e~~v~  228 (233)
T 1k4i_A          152 GHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKLE  228 (233)
T ss_dssp             SHHHHHHHHHHHTTCCSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEEHHHHHHHHHHHHCCC-
T ss_pred             ChHHHHHHHHHHcCCCceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcCCeec
Confidence            999999999999999999999999999           999999999999999999999999999999999998875
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A Back     alignment and structure
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A* Back     alignment and structure
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A Back     alignment and structure
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A Back     alignment and structure
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 551
d1snna_219 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 2e-75
d1g57a_209 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 6e-74
d1k4ia_216 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 3e-72
d1tksa_202 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 2e-70
d2bz1a1174 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {E 2e-57
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Length = 219 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: YrdC/RibB
superfamily: YrdC/RibB
family: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
domain: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
species: Archaeon Methanocaldococcus jannaschii [TaxId: 2190]

 Score =  236 bits (602), Expect = 2e-75
 Identities = 60/218 (27%), Positives = 118/218 (54%), Gaps = 7/218 (3%)

Query: 110 SISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGED 169
           ++ +AIE +++G++++V D ++RE E D+++A+  +TPE +  + +   G++C ++  + 
Sbjct: 2   NVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDI 61

Query: 170 LERLELPLMVNHKDNEEKLCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAK 229
             +L +P MV+  +   +           ++  +      +  + +  T TG++ NDRA 
Sbjct: 62  CNKLGIPFMVDILEFASQKFKVLRELYPNDIPYDEKSSFSITINHR-KTFTGITDNDRAF 120

Query: 230 TVLALA------CRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLEPVA 283
           T+  LA        +   ++F  PG +  L+  EG V  R GHTE +V LA LA L P+ 
Sbjct: 121 TIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGLVKNRQGHTEMTVALAELANLVPIT 180

Query: 284 VLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRY 321
            +CE++ DDG+     + +++A+  NL  +S  ++I Y
Sbjct: 181 TICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINY 218
>d1g57a_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Escherichia coli [TaxId: 562]} Length = 209 Back     information, alignment and structure
>d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Magnaporthe grisea [TaxId: 148305]} Length = 216 Back     information, alignment and structure
>d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]} Length = 202 Back     information, alignment and structure
>d2bz1a1 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {Escherichia coli [TaxId: 562]} Length = 174 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query551
d1g57a_209 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d1tksa_202 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d1k4ia_216 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d1snna_219 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d2bz1a1174 GTP cyclohydrolase II, RibA {Escherichia coli [Tax 100.0
>d1g57a_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: YrdC/RibB
superfamily: YrdC/RibB
family: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
domain: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.6e-71  Score=536.39  Aligned_cols=201  Identities=49%  Similarity=0.880  Sum_probs=193.6

Q ss_pred             cccHHHHHHHHHcCcEEEEEeCCCCCCceeEEEEcCCCCHHHHHHHHHhCCccEEeecChhhHhhcCCCcccccCCCccc
Q 008849          108 FASISEAIEDIRQGKLVIVVDDEDRENEGDLIMAASLVTPEAMAFIVRHGTGIVCVSMKGEDLERLELPLMVNHKDNEEK  187 (551)
Q Consensus       108 ~~~I~~Ai~aLr~G~~Viv~Dde~rEnEgdLv~aAe~vT~e~v~fm~r~~~Glicval~~e~~~rL~Lp~m~~~~~n~~~  187 (551)
                      |++|++||++||+|+||||+||++||||||||++||.+|||.|+||++|++|+||+||++++|++|+||+|+..  |.+.
T Consensus         9 ~~~ie~ai~alk~G~~Viv~Dd~~RE~EgDlv~~Ae~~t~e~i~fm~~~~~GliC~a~~~~~~~~L~Lp~m~~~--~~~~   86 (209)
T d1g57a_           9 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTSA   86 (209)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEC----CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--CCCT
T ss_pred             hhhHHHHHHHHHCCCEEEEEECCCCCCcccEEEEHHHCCHHHHHHHHHhCCCCEEEcccHHHHhcCCCCCcccc--cccc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999987  7888


Q ss_pred             cccceEEEEEeccCcchhhhhhhcccccCCCcccCChhhHHHHHHHHhcCCCCCCCccCCCCcccceeccCCcccccChh
Q 008849          188 LCTAFTVSVVLEMGSETCFLILLKEDAKYGTTTGVSANDRAKTVLALACRDSKPEDFNRPGHIFPLKYREGGVLKRAGHT  267 (551)
Q Consensus       188 ~~taFtvsV~~~~~~~~~~~~~~~~Da~~gttTGISA~DRA~TIr~LAdp~s~p~Df~rPGHVfPL~a~~gGvl~R~GhT  267 (551)
                      ++++|||||                |++.|++|||||.|||+|||.|++++++|.||++|||||||++++|||++|+|||
T Consensus        87 ~~~~ftvsv----------------d~~~g~tTGISa~dRa~Tir~l~~~~~~~~df~~PGHv~pL~a~~gGv~~R~GHT  150 (209)
T d1g57a_          87 YGTGFTVTI----------------EAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHT  150 (209)
T ss_dssp             TCCCBBSCE----------------EESSSCSSSCSHHHHHHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHH
T ss_pred             cCCcceEEE----------------EecCCccccccHHHHHHHHHHhhccCCCHHHhcCCceeceeeeccCCccccchHH
Confidence            999999999                9988999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCceEEEEEEeCCCCCcCChhHHHHHHHhcCCceecHHHHHHHHHhhh
Q 008849          268 EASVDLAVLAGLEPVAVLCEIVDDDGSMARLPKLRQFAQTENLKIISIADLIRYRRKRD  326 (551)
Q Consensus       268 EAAvDLarlAGl~PaaVicEi~~~dG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~~E  326 (551)
                      |||||||+|||+.|++||||||++||+||+.+++++||++|+||+|+|+|||+||+++|
T Consensus       151 EaavdL~~lAGl~P~avi~Eil~~dG~~~~~~~~~~fA~~~~l~~isi~dli~yr~~~e  209 (209)
T d1g57a_         151 EATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHE  209 (209)
T ss_dssp             HHHHHHHHHTTSCSCEEEEEBBCTTSSBCCHHHHHHHHHHTTCEEEEHHHHHHHHHHHC
T ss_pred             HHHHHHHHhcCCCCeEEEEEEecCCCcccCHHHHHHHHHHcCCCEEEHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999876
>d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]} Back     information, alignment and structure
>d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Magnaporthe grisea [TaxId: 148305]} Back     information, alignment and structure
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2bz1a1 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure