Citrus Sinensis ID: 008946

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------55

MASNTRIDSRSGFCKSNSIFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKLAGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGRFKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRATYLPLVPPILVALISGADQIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL

cccccccccccccccccEEEEcccccccccccccHHHHHHHHccccccccEEEEcccccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHccccEEEcccccccHHHHHHHHHHcccEEEEEccccHHHHHcccccEEEEccccccccccccccccHHHHHHccccccccccccccccEEEEEcccccccccccEEEccHHHHHHHHHHHccccccccccEEEEEccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccccEEccccHHHHHHHHcccccccccccccccEEEcccccccHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccccccEEEEEccccccccccccccEEEEEcccccccccccHHHHHHcccccccccccccEEEcccccEEEEccccHHHHccccccccHHHHHHHHcccccccEEEccccccccccEEEEEEEEcccccccHHHHHHHHHHcccccccccEEEEEccccccccHHHHHHHHHHHHHccc

cccHHHcccccHHHHHHHEEEcccccccccccccHHHHHHHHHHHccccEEEEEcccccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHcccEEEEEHHHHHHHcccccccEEEEEcccccccccccccccHHHHHHHcccccccccccccccEEEEEEEcccccccccEEEcHHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccEEccccHHHHHHHHHccHHcccccccHHHHHHHcccccccHHHHHHHHHHccccEEEEcccccccccEEEEccccccccccccccccccccEEEEEccccccEcccccEEEEEEEcccccccccccHHHHHHHEcccccEEEEEEEEEcccccEEEEEEHHHcEEEccEEEcHHHHHHHHcccccEEEEEEEEEEEcccEEEEEEEEEEcccccccHHHHHHHHHHHcHHHccccEEEEHHHccccccccEcHHHcccHHHccc

masntridsrsgfcksnsifyskrkpvslppnesldvttfissrahhgrtafidaatgrhLTFSELWRAVDSVStclsdmgirkGHVIlllspnsiffPVVCLAVMSLGAiitttnplntKQEIAKQIADSKPVLAFTIsqlvpklagstlpivllddekttstegiktvttlpqmmrkepsgtlvrdrinqDDVATLLYssgttgaskgvvSSHRNLIAMVQTVLGrfkledgeqtfictvpmfHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRatylplvpPILVALISgadqirskydlsslqsvlsggaplsrEVIEGFVQKYPkvrilqgygltestgigastdsleesrkygtagmlspsmeakivdpdsgkaLLVNQTgelwlkgpsimkgyfsnpeattstldsegwlrtgdlcyidddgFIFIVDRLKELIkykgyqvppaELEALLlthpkisdaavvpfpdkeagqypmAYVVREagsrlseneVMDFVARQVAPYKRVRRVAFVasipknpsgkilRKDLIKLATSKL

masntridsrsgfcksnsifyskrkpvslppnESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQlvpklagstlpivllddekttstegiktvttlpqmmrkepsgtlvrdriNQDDVATLLYSsgttgaskgvvsshRNLIAMVQTVLGRFKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRATYLPLVPPILVALISGADQIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGygltestgigastdsleESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVArqvapykrvRRVAfvasipknpsgkilrkdliklatskl

MASNTRIDSRSGFCKSNSIFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKLAGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGRFKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRATYlplvppilvaliSGADQIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL

*******************F**************LDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKLAGSTLPIVLLDD******************************RINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGRFKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRATYLPLVPPILVALISGADQIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTEST************************************ALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPK*****IL************

***********GFCKSNSIFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKLAGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKE*SGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGRFKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRATYLPLVPPILVALISGADQIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL*TS**

*********RSGFCKSNSIFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKLAGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGRFKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRATYLPLVPPILVALISGADQIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLATSKL

*****RIDSRSGFCKSNSIFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKLAGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGRFKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRATYLPLVPPILVALISGADQIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKL*****

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		548	2.2.26 [Sep-21-2011]
Q84P21		546	4-coumarate--CoA ligase-l	yes	no	0.981	0.985	0.766	0.0
P0C5B6		550	4-coumarate--CoA ligase-l	no	no	0.981	0.978	0.666	0.0
Q84P25		565	4-coumarate--CoA ligase-l	no	no	0.983	0.953	0.638	0.0
Q3E6Y4		552	4-coumarate--CoA ligase-l	no	no	0.983	0.976	0.644	0.0
Q84P26		550	4-coumarate--CoA ligase-l	no	no	0.989	0.985	0.625	0.0
Q10S72		552	4-coumarate--CoA ligase-l	yes	no	0.981	0.974	0.631	0.0
Q84P23		562	4-coumarate--CoA ligase-l	no	no	0.954	0.930	0.454	1e-133
Q84P24		566	4-coumarate--CoA ligase-l	no	no	0.970	0.939	0.439	1e-131
Q9M0X9		544	4-coumarate--CoA ligase-l	no	no	0.968	0.976	0.434	1e-130
Q7F1X5		542	4-coumarate--CoA ligase-l	no	no	0.916	0.926	0.430	1e-124

>sp\|Q84P21\|4CLL5_ARATH 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2	Back alignment and function desciption

 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/543 (76%), Positives = 482/543 (88%), Gaps = 5/543 (0%)

Query: 7   IDSRSGFCKSNSIFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSEL 66
           ++SRSGFC SNS FYSKR P+ LPPN SLDVTTFISS+AH GR AFIDA+TG++LTF+EL
Sbjct: 4   VNSRSGFCNSNSTFYSKRTPIPLPPNPSLDVTTFISSQAHRGRIAFIDASTGQNLTFTEL 63

Query: 67  WRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAK 126
           WRAV+SV+ CLS++GIRKGHV+LLLSPNSI FPVVCL+VMSLGAIITTTNPLNT  EIAK
Sbjct: 64  WRAVESVADCLSEIGIRKGHVVLLLSPNSILFPVVCLSVMSLGAIITTTNPLNTSNEIAK 123

Query: 127 QIADSKPVLAFTISQLVPKL--AGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGT 184
           QI DS PVLAFT SQL+PK+  A   LPIVL+D+E+  S   +  V  L +MM+KEPSG 
Sbjct: 124 QIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEERVDS---VGDVRRLVEMMKKEPSGN 180

Query: 185 LVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGRFKLEDGEQTFICTVPM 244
            V++R++QDD ATLLYSSGTTG SKGV+SSHRNLIAMVQT++ RF  +DGEQ FICTVPM
Sbjct: 181 RVKERVDQDDTATLLYSSGTTGMSKGVISSHRNLIAMVQTIVNRFGSDDGEQRFICTVPM 240

Query: 245 FHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRATYLPLVPPILVALISGADQI 304
           FHIYGLAAFATGLLA GSTI+VLSKF+MHEM+S+I KY+AT LPLVPPILVA+++GADQI
Sbjct: 241 FHIYGLAAFATGLLAYGSTIIVLSKFEMHEMMSAIGKYQATSLPLVPPILVAMVNGADQI 300

Query: 305 RSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRK 364
           ++KYDLSS+ +VL GGAPLS+EV EGF +KYP V+ILQGYGLTESTGIGASTD++EESR+
Sbjct: 301 KAKYDLSSMHTVLCGGAPLSKEVTEGFAEKYPTVKILQGYGLTESTGIGASTDTVEESRR 360

Query: 365 YGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWL 424
           YGTAG LS SME +IVDP +G+ L   QTGELWLKGPSIMKGYFSN EAT+STLDSEGWL
Sbjct: 361 YGTAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWL 420

Query: 425 RTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAG 484
           RTGDLCYID+DGFIF+VDRLKELIKYKGYQV PAELEALLLTHP+I+DAAV+PFPDKE G
Sbjct: 421 RTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVG 480

Query: 485 QYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLA 544
           Q+PMAYVVR+ GS LSE  +M+FVA+QVAPYKR+R+VAFV+SIPKNPSGKILRKDLIK+A
Sbjct: 481 QFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDLIKIA 540

Query: 545 TSK 547
           TS 
Sbjct: 541 TSN 543

Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors. Converts 12-oxo-phytodienoic acid (OPDA) and 3-oxo-2-(2'-pentenyl)-cyclopentane-1-octanoic acid (OPC-8:0) into OPDA-CoA and OPC-8:0-CoA, respectively.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: -

>sp\|P0C5B6\|4CLL4_ARATH 4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana GN=4CLL4 PE=2 SV=1	Back alignment and function description

>sp\|Q84P25\|4CLL2_ARATH 4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2	Back alignment and function description

>sp\|Q3E6Y4\|4CLL3_ARATH 4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana GN=4CLL3 PE=2 SV=2	Back alignment and function description

>sp\|Q84P26\|4CLL8_ARATH 4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2	Back alignment and function description

>sp\|Q10S72\|4CLL4_ORYSJ 4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1	Back alignment and function description

>sp\|Q84P23\|4CLL9_ARATH 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2	Back alignment and function description

>sp\|Q84P24\|4CLL6_ARATH 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2	Back alignment and function description

>sp\|Q9M0X9\|4CLL7_ARATH 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7 PE=1 SV=1	Back alignment and function description

>sp\|Q7F1X5\|4CLL5_ORYSJ 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		548
255539150		549	AMP dependent CoA ligase, putative [Rici	0.992	0.990	0.801	0.0
225459832		549	PREDICTED: 4-coumarate--CoA ligase-like	0.998	0.996	0.801	0.0
147797808		546	hypothetical protein VITISV_000975 [Viti	0.981	0.985	0.812	0.0
224085996		554	acyl:coa ligase [Populus trichocarpa] gi	0.994	0.983	0.782	0.0
224061915		554	acyl:coa ligase [Populus trichocarpa] gi	0.976	0.965	0.790	0.0
297850466		546	opc-8:0 CoA ligase1 [Arabidopsis lyrata	0.981	0.985	0.775	0.0
18394871		546	OPC-8:0 CoA ligase1 [Arabidopsis thalian	0.981	0.985	0.766	0.0
29893225		546	4-coumarate-CoA ligase-like protein [Ara	0.981	0.985	0.764	0.0
449455583		550	PREDICTED: 4-coumarate--CoA ligase-like	0.990	0.987	0.755	0.0
356553319		549	PREDICTED: 4-coumarate--CoA ligase-like	0.989	0.987	0.771	0.0

>gi\|255539150\|ref\|XP_002510640.1\| AMP dependent CoA ligase, putative [Ricinus communis] gi\|223551341\|gb\|EEF52827.1\| AMP dependent CoA ligase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  922 bits (2382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/549 (80%), Positives = 500/549 (91%), Gaps = 5/549 (0%)

Query: 2   ASNTRIDSRSGFCKSNSIFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHL 61
           +S + ID+RSGFC+SNS FYSKRKP+ LPP  S+D+TTFISS+AH+G+TAFIDA TGRHL
Sbjct: 4   SSTSAIDTRSGFCRSNSTFYSKRKPIPLPPKHSMDITTFISSQAHNGKTAFIDATTGRHL 63

Query: 62  TFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTK 121
           +FS+LW+AVDSV+ CL DMGIRKGHV+LLLSPNSIFFP+VCL+VMSLGAIITTTNPLNT 
Sbjct: 64  SFSDLWKAVDSVANCLCDMGIRKGHVVLLLSPNSIFFPIVCLSVMSLGAIITTTNPLNTP 123

Query: 122 QEIAKQIADSKPVLAFTISQLVPKL--AGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRK 179
           +EIAKQIADSKP+LAFT  QLVPKL  + S LPIVL+DD+    +   K +TTL +MM K
Sbjct: 124 REIAKQIADSKPLLAFTTPQLVPKLTESSSNLPIVLIDDDDHNCSA--KILTTLTEMMTK 181

Query: 180 EPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGRFKLEDGEQTFI 239
           EPS   V++R++ DD ATLLYSSGTTGASKGVVSSHRNLIAMVQT++GRF  ED E  FI
Sbjct: 182 EPSENRVKERVSMDDTATLLYSSGTTGASKGVVSSHRNLIAMVQTIVGRFN-EDREHKFI 240

Query: 240 CTVPMFHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRATYLPLVPPILVALIS 299
           CTVPMFHIYGLAAFATGLLASGSTI+VLSKF++HEMLS+I +YRAT LPLVPPILVA+I+
Sbjct: 241 CTVPMFHIYGLAAFATGLLASGSTIIVLSKFEIHEMLSTIERYRATDLPLVPPILVAMIN 300

Query: 300 GADQIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSL 359
           GADQ+R KYDLSSL++VLSGGAPLS+EVIEGF +KYP VRILQGYGLTESTGIGASTD+L
Sbjct: 301 GADQMRLKYDLSSLKTVLSGGAPLSKEVIEGFAEKYPTVRILQGYGLTESTGIGASTDTL 360

Query: 360 EESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLD 419
           EESR+YGTAG+LSPSMEAKIV+P++GKAL VN TGELWL+GPSIMKGYFSN EAT+STLD
Sbjct: 361 EESRRYGTAGLLSPSMEAKIVEPENGKALTVNHTGELWLRGPSIMKGYFSNAEATSSTLD 420

Query: 420 SEGWLRTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFP 479
           SEGWLRTGDLCYIDDDGF+F+VDRLKELIKYKGYQVPPAELEALLLTH +ISDAAV+PFP
Sbjct: 421 SEGWLRTGDLCYIDDDGFVFVVDRLKELIKYKGYQVPPAELEALLLTHAEISDAAVIPFP 480

Query: 480 DKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKD 539
           DKEAGQ PMAYVVR+AGS LSE+ VMDFVARQVAPYKR+RRV F+A+IPKNPSGKILRKD
Sbjct: 481 DKEAGQVPMAYVVRKAGSNLSESSVMDFVARQVAPYKRIRRVTFIAAIPKNPSGKILRKD 540

Query: 540 LIKLATSKL 548
           LIKLATSKL
Sbjct: 541 LIKLATSKL 549

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225459832\|ref\|XP_002285920.1\| PREDICTED: 4-coumarate--CoA ligase-like 5 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147797808\|emb\|CAN74074.1\| hypothetical protein VITISV_000975 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224085996\|ref\|XP_002307770.1\| acyl:coa ligase [Populus trichocarpa] gi\|222857219\|gb\|EEE94766.1\| acyl:coa ligase [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224061915\|ref\|XP_002300662.1\| acyl:coa ligase [Populus trichocarpa] gi\|222842388\|gb\|EEE79935.1\| acyl:coa ligase [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297850466\|ref\|XP_002893114.1\| opc-8:0 CoA ligase1 [Arabidopsis lyrata subsp. lyrata] gi\|297338956\|gb\|EFH69373.1\| opc-8:0 CoA ligase1 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|18394871|ref|NP_564115.1| OPC-8:0 CoA ligase1 [Arabidopsis thaliana] gi|158564046|sp|Q84P21.2|4CLL5_ARATH RecName: Full=4-coumarate--CoA ligase-like 5; AltName: Full=4-coumarate--CoA ligase isoform 9; Short=At4CL9; AltName: Full=Peroxisomal OPC-8:0-CoA ligase 1 gi|13430676|gb|AAK25960.1|AF360250_1 unknown protein [Arabidopsis thaliana] gi|14532846|gb|AAK64105.1| unknown protein [Arabidopsis thaliana] gi|116490123|gb|ABJ98946.1| peroxisomal OPC-8:0 CoA ligase [Arabidopsis thaliana] gi|332191859|gb|AEE29980.1| OPC-8:0 CoA ligase1 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|29893225\|gb\|AAP03021.1\| 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|449455583\|ref\|XP_004145532.1\| PREDICTED: 4-coumarate--CoA ligase-like 5-like [Cucumis sativus] gi\|449485129\|ref\|XP_004157077.1\| PREDICTED: 4-coumarate--CoA ligase-like 5-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356553319\|ref\|XP_003545004.1\| PREDICTED: 4-coumarate--CoA ligase-like 5-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		548
TAIR\|locus:2034392		546	OPCL1 "OPC-8:0 CoA ligase1" [A	0.979	0.983	0.749	1.7e-217
TAIR\|locus:2034403		550	AT1G20500 [Arabidopsis thalian	0.981	0.978	0.651	1e-187
TAIR\|locus:2034423		565	AT1G20480 [Arabidopsis thalian	0.983	0.953	0.624	7.4e-185
TAIR\|locus:2176662		550	4CL8 [Arabidopsis thaliana (ta	0.989	0.985	0.611	3.1e-177
TAIR\|locus:2158559		562	AT5G63380 [Arabidopsis thalian	0.954	0.930	0.443	4.9e-117
TAIR\|locus:2117209		566	AT4G19010 [Arabidopsis thalian	0.970	0.939	0.426	4.4e-116
TAIR\|locus:2115673		544	AT4G05160 [Arabidopsis thalian	0.978	0.985	0.422	1.7e-114
TAIR\|locus:2094771		570	4CL5 "4-coumarate:CoA ligase 5	0.947	0.910	0.393	4.5e-91
TAIR\|locus:2015003		561	4CL3 "4-coumarate:CoA ligase 3	0.937	0.916	0.404	9.3e-91
TAIR\|locus:2017602		561	4CL1 "4-coumarate:CoA ligase 1	0.976	0.953	0.394	6.5e-90

TAIR\|locus:2034392 OPCL1 "OPC-8:0 CoA ligase1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2101 (744.6 bits), Expect = 1.7e-217, P = 1.7e-217
 Identities = 406/542 (74%), Positives = 470/542 (86%)

Query:     7 IDSRSGFCKSNSIFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSEL 66
             ++SRSGFC SNS FYSKR P+ LPPN SLDVTTFISS+AH GR AFIDA+TG++LTF+EL
Sbjct:     4 VNSRSGFCNSNSTFYSKRTPIPLPPNPSLDVTTFISSQAHRGRIAFIDASTGQNLTFTEL 63

Query:    67 WRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAK 126
             WRAV+SV+ CLS++GIRKGHV+LLLSPNSI FPVVCL+VMSLGAIITTTNPLNT  EIAK
Sbjct:    64 WRAVESVADCLSEIGIRKGHVVLLLSPNSILFPVVCLSVMSLGAIITTTNPLNTSNEIAK 123

Query:   127 QIADSKPVLAFTISQLVPKL--AGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGT 184
             QI DS PVLAFT SQL+PK+  A   LPIVL+D+E+  S   +  V  L +MM+KEPSG 
Sbjct:   124 QIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEERVDS---VGDVRRLVEMMKKEPSGN 180

Query:   185 LVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGRFKLEDGEQTFICTVPM 244
              V++R++QDD ATLLYSSGTTG SKGV+SSHRNLIAMVQT++ RF  +DGEQ FICTVPM
Sbjct:   181 RVKERVDQDDTATLLYSSGTTGMSKGVISSHRNLIAMVQTIVNRFGSDDGEQRFICTVPM 240

Query:   245 FHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSISKYRATYXXXXXXXXXXXXSGADQI 304
             FHIYGLAAFATGLLA GSTI+VLSKF+MHEM+S+I KY+AT             +GADQI
Sbjct:   241 FHIYGLAAFATGLLAYGSTIIVLSKFEMHEMMSAIGKYQATSLPLVPPILVAMVNGADQI 300

Query:   305 RSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRK 364
             ++KYDLSS+ +VL GGAPLS+EV EGF +KYP V+ILQGYGLTESTGIGASTD++EESR+
Sbjct:   301 KAKYDLSSMHTVLCGGAPLSKEVTEGFAEKYPTVKILQGYGLTESTGIGASTDTVEESRR 360

Query:   365 YGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWL 424
             YGTAG LS SME +IVDP +G+ L   QTGELWLKGPSIMKGYFSN EAT+STLDSEGWL
Sbjct:   361 YGTAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWL 420

Query:   425 RTGDLCYIDDDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAG 484
             RTGDLCYID+DGFIF+VDRLKELIKYKGYQV PAELEALLLTHP+I+DAAV+PFPDKE G
Sbjct:   421 RTGDLCYIDEDGFIFVVDRLKELIKYKGYQVAPAELEALLLTHPEITDAAVIPFPDKEVG 480

Query:   485 QYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRRVAFVASIPKNPSGKILRKDLIKLA 544
             Q+PMAYVVR+ GS LSE  +M+FVA+QVAPYKR+R+VAFV+SIPKNPSGKILRKDLIK+A
Sbjct:   481 QFPMAYVVRKTGSSLSEKTIMEFVAKQVAPYKRIRKVAFVSSIPKNPSGKILRKDLIKIA 540

Query:   545 TS 546
             TS
Sbjct:   541 TS 542

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0009698 "phenylpropanoid metabolic process" evidence=ISS

GO:0016207 "4-coumarate-CoA ligase activity" evidence=ISS

GO:0005777 "peroxisome" evidence=IDA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA;IMP

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

TAIR\|locus:2034403 AT1G20500 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2034423 AT1G20480 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2176662 4CL8 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2158559 AT5G63380 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2117209 AT4G19010 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2115673 AT4G05160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2094771 4CL5 "4-coumarate:CoA ligase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2015003 4CL3 "4-coumarate:CoA ligase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2017602 4CL1 "4-coumarate:CoA ligase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q54P78	4CL2_DICDI	6, ., 2, ., 1, ., 1, 2	0.3441	0.9489	0.9437	yes	no
P94547	LCFA_BACSU	6, ., 2, ., 1, ., 3	0.3134	0.9470	0.9267	yes	no
Q84P21	4CLL5_ARATH	6, ., 2, ., 1, ., -	0.7661	0.9817	0.9853	yes	no
Q10S72	4CLL4_ORYSJ	6, ., 2, ., 1, ., -	0.6313	0.9817	0.9746	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	6.2.1	0.921
4th Layer	6.2.1.12	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00015553001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (549 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00038876001	SubName- Full=Chromosome chr8 scaffold_99, whole genome shotgun sequence; (448 aa)	•	•	•	0.903
	GSVIVG00018681001	SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (691 aa)			•	0.901
	GSVIVG00021908001	SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (379 aa)			•	0.899
	GSVIVG00009919001	SubName- Full=Chromosome undetermined scaffold_1671, whole genome shotgun sequence; Flags- Frag [...] (148 aa)			•	0.899
	GSVIVG00009515001	SubName- Full=Chromosome undetermined scaffold_237, whole genome shotgun sequence; (398 aa)			•	0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		548
cd05904		504	cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL)	0.0
PLN02574		560	PLN02574, PLN02574, 4-coumarate--CoA ligase-like	0.0
cd05911		487	cd05911, Firefly_Luc_like, Firefly luciferase of l	1e-176
PLN02246		537	PLN02246, PLN02246, 4-coumarate--CoA ligase	1e-170
cd05936		468	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain	1e-150
COG0318		534	COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/	1e-150
PLN02330		546	PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1	1e-131
cd05917		347	cd05917, FACL_like_2, Uncharacterized subfamily of	1e-124
PRK07656		513	PRK07656, PRK07656, long-chain-fatty-acid--CoA lig	1e-120
PRK06187		521	PRK06187, PRK06187, long-chain-fatty-acid--CoA lig	1e-115
pfam00501		412	pfam00501, AMP-binding, AMP-binding enzyme	1e-115
cd05929		342	cd05929, BACL_like, Bacterial Bile acid CoA ligase	1e-114
cd04433		338	cd04433, AFD_class_I, Adenylate forming domain, Cl	1e-111
cd05935		430	cd05935, LC_FACS_like, Putative long-chain fatty a	1e-107
COG0365		528	COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat	7e-99
cd05941		430	cd05941, MCS, Malonyl-CoA synthetase (MCS)	1e-92
cd05920		483	cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l	1e-91
cd05903		437	cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li	2e-91
PRK08314		546	PRK08314, PRK08314, long-chain-fatty-acid--CoA lig	3e-91
PRK05605		573	PRK05605, PRK05605, long-chain-fatty-acid--CoA lig	2e-89
cd05934		421	cd05934, FACL_DitJ_like, Uncharacterized subfamily	4e-88
cd05926		345	cd05926, FACL_fum10p_like, Subfamily of fatty acid	2e-87
cd05912		407	cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase	2e-86
PRK03640		483	PRK03640, PRK03640, O-succinylbenzoic acid--CoA li	5e-85
PRK08316		523	PRK08316, PRK08316, acyl-CoA synthetase; Validated	4e-83
PRK06710		563	PRK06710, PRK06710, long-chain-fatty-acid--CoA lig	3e-82
cd12119		517	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth	2e-81
PRK05677		562	PRK05677, PRK05677, long-chain-fatty-acid--CoA lig	1e-80
cd05907		456	cd05907, VL_LC_FACS_like, Long-chain fatty acid Co	6e-80
PRK12492		562	PRK12492, PRK12492, long-chain-fatty-acid--CoA lig	2e-79
cd05959		506	cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and	2e-79
PRK08315		559	PRK08315, PRK08315, AMP-binding domain protein; Va	3e-78
PRK12583		558	PRK12583, PRK12583, acyl-CoA synthetase; Provision	2e-77
cd12118		520	cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt	2e-77
cd05922		350	cd05922, FACL_like_6, Uncharacterized subfamily of	2e-76
PRK06839		496	PRK06839, PRK06839, acyl-CoA synthetase; Validated	4e-74
cd05919		436	cd05919, BCL_like, Benzoate CoA ligase (BCL) and s	6e-74
PRK07059		557	PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig	2e-73
TIGR01923		436	TIGR01923, menE, O-succinylbenzoate-CoA ligase	4e-73
PRK07529		632	PRK07529, PRK07529, AMP-binding domain protein; Va	3e-72
cd05944		359	cd05944, FACL_like_4, Uncharacterized subfamily of	3e-72
PRK08974		560	PRK08974, PRK08974, long-chain-fatty-acid--CoA lig	5e-72
COG1022		613	COG1022, FAA1, Long-chain acyl-CoA synthetases (AM	1e-71
PRK09088		488	PRK09088, PRK09088, acyl-CoA synthetase; Validated	5e-71
PRK08276		502	PRK08276, PRK08276, long-chain-fatty-acid--CoA lig	2e-70
PRK08751		560	PRK08751, PRK08751, putative long-chain fatty acyl	5e-70
PRK07786		542	PRK07786, PRK07786, long-chain-fatty-acid--CoA lig	7e-70
PRK06188		524	PRK06188, PRK06188, acyl-CoA synthetase; Validated	2e-69
PRK08008		517	PRK08008, caiC, putative crotonobetaine/carnitine-	5e-69
cd05972		430	cd05972, MACS_like, Medium-chain acyl-CoA syntheta	9e-69
PRK06178		567	PRK06178, PRK06178, acyl-CoA synthetase; Validated	5e-68
PRK13295		547	PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig	3e-66
PRK12406		509	PRK12406, PRK12406, long-chain-fatty-acid--CoA lig	1e-65
PRK06145		497	PRK06145, PRK06145, acyl-CoA synthetase; Validated	2e-63
PRK07514		504	PRK07514, PRK07514, malonyl-CoA synthase; Validate	2e-61
PRK07788		549	PRK07788, PRK07788, acyl-CoA synthetase; Validated	1e-60
PRK07470		528	PRK07470, PRK07470, acyl-CoA synthetase; Validated	1e-60
PRK06087		547	PRK06087, PRK06087, short chain acyl-CoA synthetas	2e-60
cd05931		547	cd05931, FAAL, Fatty acyl-AMP ligase (FAAL)	3e-60
cd05958		487	cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL)	4e-60
cd05971		439	cd05971, MACS_like_3, Uncharacterized subfamily of	1e-59
cd05909		489	cd05909, AAS_C, C-terminal domain of the acyl-acyl	2e-59
TIGR03205		541	TIGR03205, pimA, dicarboxylate--CoA ligase PimA	1e-58
PRK13391		511	PRK13391, PRK13391, acyl-CoA synthetase; Provision	1e-57
TIGR02262		508	TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil	2e-55
cd05930		445	cd05930, A_NRPS, The adenylation domain of nonribo	2e-55
cd05945		447	cd05945, DltA, D-alanine:D-alanyl carrier protein	5e-55
cd05970		537	cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s	8e-55
COG1021		542	COG1021, EntE, Peptide arylation enzymes [Secondar	1e-54
PRK07787		471	PRK07787, PRK07787, acyl-CoA synthetase; Validated	5e-54
PRK06155		542	PRK06155, PRK06155, crotonobetaine/carnitine-CoA l	6e-53
cd05974		433	cd05974, MACS_like_1, Uncharacterized subfamily of	7e-53
TIGR03208		538	TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate	2e-52
TIGR01733		409	TIGR01733, AA-adenyl-dom, amino acid adenylation d	2e-50
cd05923		495	cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL)	4e-50
PRK13382		537	PRK13382, PRK13382, acyl-CoA synthetase; Provision	1e-49
PLN02860		563	PLN02860, PLN02860, o-succinylbenzoate-CoA ligase	1e-49
cd05969		443	cd05969, MACS_like_4, Uncharacterized subfamily of	3e-48
PRK04319		570	PRK04319, PRK04319, acetyl-CoA synthetase; Provisi	3e-48
TIGR03098		517	TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form	6e-48
PRK05852		534	PRK05852, PRK05852, acyl-CoA synthetase; Validated	2e-47
PRK06164		540	PRK06164, PRK06164, acyl-CoA synthetase; Validated	2e-46
PLN03102		579	PLN03102, PLN03102, acyl-activating enzyme; Provis	6e-46
cd05927		539	cd05927, LC-FACS_euk, Eukaryotic long-chain fatty	8e-46
TIGR02275		526	TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP	1e-45
PRK13390		501	PRK13390, PRK13390, acyl-CoA synthetase; Provision	1e-45
cd12117		474	cd12117, A_NRPS_Srf_like, The adenylation domain o	2e-45
PRK07798		533	PRK07798, PRK07798, acyl-CoA synthetase; Validated	2e-45
cd05932		504	cd05932, LC_FACS_bac, Bacterial long-chain fatty a	2e-45
PRK08633		1146	PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola	3e-45
cd05924		365	cd05924, FACL_like_5, Uncharacterized subfamily of	3e-45
PRK08162		545	PRK08162, PRK08162, acyl-CoA synthetase; Validated	3e-45
PRK06018		542	PRK06018, PRK06018, putative acyl-CoA synthetase;	4e-45
PRK13383		516	PRK13383, PRK13383, acyl-CoA synthetase; Provision	8e-45
cd05973		440	cd05973, MACS_like_2, Uncharacterized subfamily of	8e-44
cd05915		509	cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase	2e-43
TIGR02188		625	TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase	1e-41
cd05968		474	cd05968, AACS_like, Uncharacterized acyl-CoA synth	2e-41
cd05967		607	cd05967, PrpE, Propionyl-CoA synthetase (PrpE)	3e-41
PRK07638		487	PRK07638, PRK07638, acyl-CoA synthetase; Validated	7e-41
cd05966		602	cd05966, ACS, Acetyl-CoA synthetase (also known as	1e-40
cd05940		444	cd05940, FATP_FACS, Fatty acid transport proteins	2e-40
PRK05620		576	PRK05620, PRK05620, long-chain-fatty-acid--CoA lig	4e-39
cd12116		438	cd12116, A_NRPS_Ta1_like, The adenylation domain o	6e-39
COG1020		642	COG1020, EntF, Non-ribosomal peptide synthetase mo	2e-38
cd12114		476	cd12114, A_NRPS_TlmIV_like, The adenylation domain	1e-37
cd12115		449	cd12115, A_NRPS_Sfm_like, The adenylation domain o	2e-37
cd05928		530	cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co	4e-37
PRK13388		540	PRK13388, PRK13388, acyl-CoA synthetase; Provision	5e-37
cd05918		447	cd05918, A_NRPS_SidN3_like, The adenylation (A) do	1e-36
PRK10946		536	PRK10946, entE, enterobactin synthase subunit E; P	1e-36
PRK07867		529	PRK07867, PRK07867, acyl-CoA synthetase; Validated	5e-36
PLN02479		567	PLN02479, PLN02479, acetate-CoA ligase	6e-36
cd05910		455	cd05910, FACL_like_1, Uncharacterized subfamily of	2e-34
PRK09274		552	PRK09274, PRK09274, peptide synthase; Provisional	2e-34
PRK06814		1140	PRK06814, PRK06814, acylglycerophosphoethanolamine	2e-34
cd05906		560	cd05906, A_NRPS_TubE_like, The adenylation domain	6e-34
cd05933		594	cd05933, ACSBG_like, Bubblegum-like very long-chai	7e-34
PRK12316		5163	PRK12316, PRK12316, peptide synthase; Provisional	2e-33
PRK06060		705	PRK06060, PRK06060, acyl-CoA synthetase; Validated	2e-33
PRK05691		4334	PRK05691, PRK05691, peptide synthase; Validated	1e-32
PRK07008		539	PRK07008, PRK07008, long-chain-fatty-acid--CoA lig	3e-32
PRK09029		458	PRK09029, PRK09029, O-succinylbenzoic acid--CoA li	1e-31
PRK07768		545	PRK07768, PRK07768, long-chain-fatty-acid--CoA lig	2e-31
TIGR02316		628	TIGR02316, propion_prpE, propionate--CoA ligase	2e-31
PRK12467		3956	PRK12467, PRK12467, peptide synthase; Provisional	7e-31
PTZ00237		647	PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi	8e-31
PRK05857		540	PRK05857, PRK05857, acyl-CoA synthetase; Validated	3e-30
cd05908		499	cd05908, A_NRPS_MycA_like, The adenylation domain	4e-30
cd05921		559	cd05921, FCS, Feruloyl-CoA synthetase (FCS)	9e-30
PTZ00216		700	PTZ00216, PTZ00216, acyl-CoA synthetase; Provision	1e-29
TIGR01734		502	TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho	2e-29
PRK07824		358	PRK07824, PRK07824, O-succinylbenzoic acid--CoA li	2e-29
PRK09192		579	PRK09192, PRK09192, acyl-CoA synthetase; Validated	3e-29
PRK08279		600	PRK08279, PRK08279, long-chain-acyl-CoA synthetase	6e-29
PRK12316		5163	PRK12316, PRK12316, peptide synthase; Provisional	1e-28
PLN02654		666	PLN02654, PLN02654, acetate-CoA ligase	1e-28
PRK10524		629	PRK10524, prpE, propionyl-CoA synthetase; Provisio	4e-28
PRK04813		503	PRK04813, PRK04813, D-alanine--poly(phosphoribitol	5e-28
PRK00174		637	PRK00174, PRK00174, acetyl-CoA synthetase; Provisi	1e-27
cd05914		448	cd05914, FACL_like_3, Uncharacterized subfamily of	1e-26
PRK12316		5163	PRK12316, PRK12316, peptide synthase; Provisional	3e-26
PRK12467		3956	PRK12467, PRK12467, peptide synthase; Provisional	3e-25
PRK12582		624	PRK12582, PRK12582, acyl-CoA synthetase; Provision	3e-25
PRK12316		5163	PRK12316, PRK12316, peptide synthase; Provisional	5e-25
PRK07445		452	PRK07445, PRK07445, O-succinylbenzoic acid--CoA li	8e-25
PRK12467		3956	PRK12467, PRK12467, peptide synthase; Provisional	6e-24
PRK06334		539	PRK06334, PRK06334, long chain fatty acid--[acyl-c	6e-24
PLN02861		660	PLN02861, PLN02861, long-chain-fatty-acid-CoA liga	2e-23
PRK08043		718	PRK08043, PRK08043, bifunctional acyl-[acyl carrie	4e-23
PLN02387		696	PLN02387, PLN02387, long-chain-fatty-acid-CoA liga	5e-23
PRK05851		525	PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c	9e-23
PRK08180		614	PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe	2e-22
PRK10252		1296	PRK10252, entF, enterobactin synthase subunit F; P	3e-22
cd05937		468	cd05937, FATP_chFAT1_like, Uncharacterized subfami	7e-22
PTZ00342		746	PTZ00342, PTZ00342, acyl-CoA synthetase; Provision	4e-21
PRK05691		4334	PRK05691, PRK05691, peptide synthase; Validated	5e-21
PRK05691		4334	PRK05691, PRK05691, peptide synthase; Validated	2e-20
PLN02430		660	PLN02430, PLN02430, long-chain-fatty-acid-CoA liga	1e-19
cd05943		616	cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac	2e-17
PRK05850		578	PRK05850, PRK05850, acyl-CoA synthetase; Validated	3e-17
PRK12476		612	PRK12476, PRK12476, putative fatty-acid--CoA ligas	4e-16
PLN02736		651	PLN02736, PLN02736, long-chain acyl-CoA synthetase	4e-16
PLN02614		666	PLN02614, PLN02614, long-chain acyl-CoA synthetase	9e-16
cd05939		474	cd05939, hsFATP4_like, Fatty acid transport protei	1e-15
TIGR01217		652	TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase	3e-15
PRK08308		414	PRK08308, PRK08308, acyl-CoA synthetase; Validated	6e-15
cd05938		535	cd05938, hsFATP2a_ACSVL_like, Fatty acid transport	1e-14
cd05905		556	cd05905, Dip2, Disco-interacting protein 2 (Dip2)	4e-14
PRK05691		4334	PRK05691, PRK05691, peptide synthase; Validated	6e-14
PRK07769		631	PRK07769, PRK07769, long-chain-fatty-acid--CoA lig	3e-13
PRK03584		655	PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr	3e-11
PLN02736		651	PLN02736, PLN02736, long-chain acyl-CoA synthetase	2e-07
pfam13193		43	pfam13193, DUF4009, Domain of unknown function (DU	2e-06
COG1541		438	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme	1e-05
PRK07769		631	PRK07769, PRK07769, long-chain-fatty-acid--CoA lig	4e-05
TIGR02155		422	TIGR02155, PA_CoA_ligase, phenylacetate-CoA ligase	0.004

>gnl\|CDD\|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL)	Back alignment and domain information

 Score =  738 bits (1908), Expect = 0.0
 Identities = 276/514 (53%), Positives = 359/514 (69%), Gaps = 12/514 (2%)

Query: 29  LPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVI 88
           +P + SLD  + + +     R A IDAATGR LT++EL R V  ++  L+  G RKG V+
Sbjct: 1   IPKDLSLDSASLLFASEFGDRPALIDAATGRALTYAELERLVRRLAAGLAARGGRKGDVV 60

Query: 89  LLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKLAG 148
           LLLSPNS+ FPVV LAV+S GA++TT NPL T  EIAKQ+ DS   LA T S+L  KLA 
Sbjct: 61  LLLSPNSLEFPVVFLAVLSAGAVVTTANPLYTPAEIAKQVKDSGAKLAITTSELAEKLAS 120

Query: 149 -STLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGA 207
            +  P+VLLD     S             +            I QDDVA L YSSGTTG 
Sbjct: 121 LALEPVVLLDSADDGSA--------AIDDLLFADEPEPPVVVIKQDDVAALPYSSGTTGR 172

Query: 208 SKGVVSSHRNLIAMV-QTVLGRFKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVV 266
           SKGV+ +HRNLIA V Q V G     D E   +C +PMFHIYGL      LL  G+T+VV
Sbjct: 173 SKGVMLTHRNLIANVAQLVAGEGPNFDREDVTLCVLPMFHIYGLTVILLALLRLGATVVV 232

Query: 267 LSKFDMHEMLSSISKYRATYLPLVPPILVALISGADQIRSKYDLSSLQSVLSGGAPLSRE 326
           + +FD+ + L++I KY+ T+LP+VPPI++AL+     I  KYDLSSL+ + SG APL +E
Sbjct: 233 MPRFDLEKFLAAIEKYKVTHLPVVPPIVLALVKHP--IVDKYDLSSLKQIGSGAAPLGKE 290

Query: 327 VIEGFVQKYPKVRILQGYGLTESTGIGASTDSLEESRKYGTAGMLSPSMEAKIVDPDSGK 386
           + E F  ++P V + QGYG+TES+ +       E+  K G+ G L P++EAKIVDP++G+
Sbjct: 291 LAEAFRARFPGVELGQGYGMTESSPVTTMCPVPEKDPKPGSVGRLVPNVEAKIVDPETGE 350

Query: 387 ALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFIVDRLKE 446
           +L  NQ GELW++GP +MKGY +NPEAT  T+D +GWL TGDL Y D+DG++FIVDRLKE
Sbjct: 351 SLPPNQPGELWVRGPQVMKGYLNNPEATAETIDKDGWLHTGDLGYFDEDGYLFIVDRLKE 410

Query: 447 LIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMD 506
           LIKYKG+QV PAELEALLL+HP+I+DAAV+P+PD+EAG+ PMA+VVR+ GS LSE+EVM 
Sbjct: 411 LIKYKGFQVAPAELEALLLSHPEIADAAVIPYPDEEAGEIPMAFVVRQPGSELSEDEVMQ 470

Query: 507 FVARQVAPYKRVRRVAFVASIPKNPSGKILRKDL 540
           FVA+QVAPYK+VR+V FV +IPK+PSGKILR++L
Sbjct: 471 FVAKQVAPYKKVRKVVFVDAIPKSPSGKILRREL 504

4-Coumarate:coenzyme A ligase is a key enzyme in the phenylpropanoid metabolic pathway for monolignol and flavonoid biosynthesis. It catalyzes the synthesis of hydroxycinnamate-CoA thioesters in a two-step reaction, involving the formation of hydroxycinnamate-AMP anhydride and the nucleophilic substitution of AMP by CoA. The phenylpropanoid pathway is one of the most important secondary metabolism pathways in plants and hydroxycinnamate-CoA thioesters are the precursors of lignin and other important phenylpropanoids. Length = 504

>gnl\|CDD\|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like	Back alignment and domain information

>gnl\|CDD\|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL)	Back alignment and domain information

>gnl\|CDD\|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase	Back alignment and domain information

>gnl\|CDD\|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD	Back alignment and domain information

>gnl\|CDD\|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1	Back alignment and domain information

>gnl\|CDD\|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|215954 pfam00501, AMP-binding, AMP-binding enzyme	Back alignment and domain information

>gnl\|CDD\|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins	Back alignment and domain information

>gnl\|CDD\|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I	Back alignment and domain information

>gnl\|CDD\|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase	Back alignment and domain information

>gnl\|CDD\|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS)	Back alignment and domain information

>gnl\|CDD\|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase	Back alignment and domain information

>gnl\|CDD\|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase)	Back alignment and domain information

>gnl\|CDD\|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis	Back alignment and domain information

>gnl\|CDD\|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE)	Back alignment and domain information

>gnl\|CDD\|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	Back alignment and domain information

>gnl\|CDD\|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases	Back alignment and domain information

>gnl\|CDD\|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase)	Back alignment and domain information

>gnl\|CDD\|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated	Back alignment and domain information

>gnl\|CDD\|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis	Back alignment and domain information

>gnl\|CDD\|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes	Back alignment and domain information

>gnl\|CDD\|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase	Back alignment and domain information

>gnl\|CDD\|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated	Back alignment and domain information

>gnl\|CDD\|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM)	Back alignment and domain information

>gnl\|CDD\|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated	Back alignment and domain information

>gnl\|CDD\|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL)	Back alignment and domain information

>gnl\|CDD\|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL)	Back alignment and domain information

>gnl\|CDD\|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	Back alignment and domain information

>gnl\|CDD\|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas)	Back alignment and domain information

>gnl\|CDD\|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA	Back alignment and domain information

>gnl\|CDD\|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family	Back alignment and domain information

>gnl\|CDD\|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS)	Back alignment and domain information

>gnl\|CDD\|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA)	Back alignment and domain information

>gnl\|CDD\|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like	Back alignment and domain information

>gnl\|CDD\|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	Back alignment and domain information

>gnl\|CDD\|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase	Back alignment and domain information

>gnl\|CDD\|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain	Back alignment and domain information

>gnl\|CDD\|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL)	Back alignment and domain information

>gnl\|CDD\|172019 PRK13382, PRK13382, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase	Back alignment and domain information

>gnl\|CDD\|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS)	Back alignment and domain information

>gnl\|CDD\|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated	Back alignment and domain information

>gnl\|CDD\|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)	Back alignment and domain information

>gnl\|CDD\|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase	Back alignment and domain information

>gnl\|CDD\|139538 PRK13390, PRK13390, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C)	Back alignment and domain information

>gnl\|CDD\|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase	Back alignment and domain information

>gnl\|CDD\|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	Back alignment and domain information

>gnl\|CDD\|213291 cd05924, FACL_like_5, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|139531 PRK13383, PRK13383, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	Back alignment and domain information

>gnl\|CDD\|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	Back alignment and domain information

>gnl\|CDD\|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase	Back alignment and domain information

>gnl\|CDD\|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase	Back alignment and domain information

>gnl\|CDD\|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE)	Back alignment and domain information

>gnl\|CDD\|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)	Back alignment and domain information

>gnl\|CDD\|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes	Back alignment and domain information

>gnl\|CDD\|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase	Back alignment and domain information

>gnl\|CDD\|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes	Back alignment and domain information

>gnl\|CDD\|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae	Back alignment and domain information

>gnl\|CDD\|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM)	Back alignment and domain information

>gnl\|CDD\|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS)	Back alignment and domain information

>gnl\|CDD\|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional	Back alignment and domain information

>gnl\|CDD\|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|178097 PLN02479, PLN02479, acetate-CoA ligase	Back alignment and domain information

>gnl\|CDD\|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|236443 PRK09274, PRK09274, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional	Back alignment and domain information

>gnl\|CDD\|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents	Back alignment and domain information

>gnl\|CDD\|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS)	Back alignment and domain information

>gnl\|CDD\|237054 PRK12316, PRK12316, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235564 PRK05691, PRK05691, peptide synthase; Validated	Back alignment and domain information

>gnl\|CDD\|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|131369 TIGR02316, propion_prpE, propionate--CoA ligase	Back alignment and domain information

>gnl\|CDD\|237108 PRK12467, PRK12467, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA)	Back alignment and domain information

>gnl\|CDD\|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS)	Back alignment and domain information

>gnl\|CDD\|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1	Back alignment and domain information

>gnl\|CDD\|236108 PRK07824, PRK07824, O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|237054 PRK12316, PRK12316, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|215353 PLN02654, PLN02654, acetate-CoA ligase	Back alignment and domain information

>gnl\|CDD\|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional	Back alignment and domain information

>gnl\|CDD\|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|237054 PRK12316, PRK12316, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|237108 PRK12467, PRK12467, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|237054 PRK12316, PRK12316, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|236019 PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237108 PRK12467, PRK12467, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated	Back alignment and domain information

>gnl\|CDD\|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase	Back alignment and domain information

>gnl\|CDD\|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated	Back alignment and domain information

>gnl\|CDD\|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein	Back alignment and domain information

>gnl\|CDD\|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated	Back alignment and domain information

>gnl\|CDD\|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed	Back alignment and domain information

>gnl\|CDD\|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional	Back alignment and domain information

>gnl\|CDD\|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi	Back alignment and domain information

>gnl\|CDD\|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|235564 PRK05691, PRK05691, peptide synthase; Validated	Back alignment and domain information

>gnl\|CDD\|235564 PRK05691, PRK05691, peptide synthase; Validated	Back alignment and domain information

>gnl\|CDD\|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase	Back alignment and domain information

>gnl\|CDD\|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS)	Back alignment and domain information

>gnl\|CDD\|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|171527 PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase	Back alignment and domain information

>gnl\|CDD\|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase	Back alignment and domain information

>gnl\|CDD\|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins	Back alignment and domain information

>gnl\|CDD\|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase	Back alignment and domain information

>gnl\|CDD\|236231 PRK08308, PRK08308, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins	Back alignment and domain information

>gnl\|CDD\|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2)	Back alignment and domain information

>gnl\|CDD\|235564 PRK05691, PRK05691, peptide synthase; Validated	Back alignment and domain information

>gnl\|CDD\|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase	Back alignment and domain information

>gnl\|CDD\|221971 pfam13193, DUF4009, Domain of unknown function (DUF4009)	Back alignment and domain information

>gnl\|CDD\|224458 COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism]	Back alignment and domain information

>gnl\|CDD\|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|131210 TIGR02155, PA_CoA_ligase, phenylacetate-CoA ligase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		548
KOG1176		537	consensus Acyl-CoA synthetase [Lipid transport and	100.0
COG0365		528	Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l	100.0
KOG1177		596	consensus Long chain fatty acid acyl-CoA ligase [L	100.0
COG0318		534	CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l	100.0
PLN02574		560	4-coumarate--CoA ligase-like	100.0
PLN02654		666	acetate-CoA ligase	100.0
TIGR02316		628	propion_prpE propionate--CoA ligase. This family c	100.0
PLN02860		563	o-succinylbenzoate-CoA ligase	100.0
PTZ00237		647	acetyl-CoA synthetase; Provisional	100.0
TIGR02188		625	Ac_CoA_lig_AcsA acetate--CoA ligase. This model de	100.0
PLN02246		537	4-coumarate--CoA ligase	100.0
PRK07788		549	acyl-CoA synthetase; Validated	100.0
PRK00174		637	acetyl-CoA synthetase; Provisional	100.0
PLN02330		546	4-coumarate--CoA ligase-like 1	100.0
PRK07529		632	AMP-binding domain protein; Validated	100.0
PRK13295		547	cyclohexanecarboxylate-CoA ligase; Reviewed	100.0
PRK05677		562	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK06334		539	long chain fatty acid--[acyl-carrier-protein] liga	100.0
PRK10524		629	prpE propionyl-CoA synthetase; Provisional	100.0
PRK04319		570	acetyl-CoA synthetase; Provisional	100.0
PLN02736		651	long-chain acyl-CoA synthetase	100.0
PRK05852		534	acyl-CoA synthetase; Validated	100.0
PRK03584		655	acetoacetyl-CoA synthetase; Provisional	100.0
COG1021		542	EntE Peptide arylation enzymes [Secondary metaboli	100.0
PRK06839		496	acyl-CoA synthetase; Validated	100.0
PRK08314		546	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK06060		705	acyl-CoA synthetase; Validated	100.0
TIGR01217		652	ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym	100.0
PRK13382		537	acyl-CoA synthetase; Provisional	100.0
PRK05605		573	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK07656		513	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK08315		559	AMP-binding domain protein; Validated	100.0
PRK06145		497	acyl-CoA synthetase; Validated	100.0
PRK12583		558	acyl-CoA synthetase; Provisional	100.0
PRK08316		523	acyl-CoA synthetase; Validated	100.0
PRK07638		487	acyl-CoA synthetase; Validated	100.0
PRK07514		504	malonyl-CoA synthase; Validated	100.0
PRK09274		552	peptide synthase; Provisional	100.0
PRK07867		529	acyl-CoA synthetase; Validated	100.0
PLN02614		666	long-chain acyl-CoA synthetase	100.0
PRK06155		542	crotonobetaine/carnitine-CoA ligase; Provisional	100.0
PLN03102		579	acyl-activating enzyme; Provisional	100.0
PRK09088		488	acyl-CoA synthetase; Validated	100.0
TIGR03208		538	cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase.	100.0
PLN03052		728	acetate--CoA ligase; Provisional	100.0
TIGR02275		527	DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot	100.0
PRK07786		542	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK06087		547	short chain acyl-CoA synthetase; Reviewed	100.0
PRK03640		483	O-succinylbenzoic acid--CoA ligase; Provisional	100.0
PRK06187		521	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK05857		540	acyl-CoA synthetase; Validated	100.0
PRK06710		563	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK10946		536	entE enterobactin synthase subunit E; Provisional	100.0
PRK06178		567	acyl-CoA synthetase; Validated	100.0
PRK08008		517	caiC putative crotonobetaine/carnitine-CoA ligase;	100.0
PRK12492		562	long-chain-fatty-acid--CoA ligase; Provisional	100.0
PRK13388		540	acyl-CoA synthetase; Provisional	100.0
PRK07769		631	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK07470		528	acyl-CoA synthetase; Validated	100.0
PTZ00342		746	acyl-CoA synthetase; Provisional	100.0
PRK06164		540	acyl-CoA synthetase; Validated	100.0
PRK07059		557	Long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK12467		3956	peptide synthase; Provisional	100.0
PRK08043		718	bifunctional acyl-[acyl carrier protein] synthetas	100.0
PLN02861		660	long-chain-fatty-acid-CoA ligase	100.0
TIGR03098		515	ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor	100.0
PRK06018		542	putative acyl-CoA synthetase; Provisional	100.0
PRK07008		539	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK06188		524	acyl-CoA synthetase; Validated	100.0
TIGR03443		1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	100.0
PRK07787		471	acyl-CoA synthetase; Validated	100.0
PRK08279		600	long-chain-acyl-CoA synthetase; Validated	100.0
PRK08751		560	putative long-chain fatty acyl CoA ligase; Provisi	100.0
PRK12476		612	putative fatty-acid--CoA ligase; Provisional	100.0
PRK05851		525	long-chain-fatty-acid--[acyl-carrier-protein] liga	100.0
KOG1175		626	consensus Acyl-CoA synthetase [Lipid transport and	100.0
PRK13383		516	acyl-CoA synthetase; Provisional	100.0
TIGR01734		502	D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig	100.0
PRK10252		1296	entF enterobactin synthase subunit F; Provisional	100.0
PRK05620		576	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK07445		452	O-succinylbenzoic acid--CoA ligase; Reviewed	100.0
PRK08633		1146	2-acyl-glycerophospho-ethanolamine acyltransferase	100.0
PRK13390		501	acyl-CoA synthetase; Provisional	100.0
PRK12316		5163	peptide synthase; Provisional	100.0
PLN02387		696	long-chain-fatty-acid-CoA ligase family protein	100.0
PRK12316		5163	peptide synthase; Provisional	100.0
PRK08180		614	feruloyl-CoA synthase; Reviewed	100.0
PRK12467		3956	peptide synthase; Provisional	100.0
PRK08974		560	long-chain-fatty-acid--CoA ligase; Validated	100.0
TIGR02262		508	benz_CoA_lig benzoate-CoA ligase family. Character	100.0
TIGR03205		541	pimA dicarboxylate--CoA ligase PimA. PimA, a membe	100.0
PTZ00216		700	acyl-CoA synthetase; Provisional	100.0
PRK12406		509	long-chain-fatty-acid--CoA ligase; Provisional	100.0
COG1022		613	FAA1 Long-chain acyl-CoA synthetases (AMP-forming)	100.0
PRK04813		503	D-alanine--poly(phosphoribitol) ligase subunit 1;	100.0
PLN02479		567	acetate-CoA ligase	100.0
KOG1256		691	consensus Long-chain acyl-CoA synthetases (AMP-for	100.0
PRK05691		4334	peptide synthase; Validated	100.0
PRK08276		502	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK07868		994	acyl-CoA synthetase; Validated	100.0
PLN02430		660	long-chain-fatty-acid-CoA ligase	100.0
PRK13391		511	acyl-CoA synthetase; Provisional	100.0
PRK05691		4334	peptide synthase; Validated	100.0
PRK07798		533	acyl-CoA synthetase; Validated	100.0
PRK12582		624	acyl-CoA synthetase; Provisional	100.0
PRK08162		545	acyl-CoA synthetase; Validated	100.0
PRK06814		1140	acylglycerophosphoethanolamine acyltransferase; Pr	100.0
PRK09029		458	O-succinylbenzoic acid--CoA ligase; Provisional	100.0
PRK09192		579	acyl-CoA synthetase; Validated	100.0
PLN03051		499	acyl-activating enzyme; Provisional	100.0
PRK05850		578	acyl-CoA synthetase; Validated	100.0
TIGR01923		436	menE O-succinylbenzoate-CoA ligase. This model rep	100.0
PRK08308		414	acyl-CoA synthetase; Validated	100.0
KOG1179		649	consensus Very long-chain acyl-CoA synthetase/fatt	100.0
PRK07768		545	long-chain-fatty-acid--CoA ligase; Validated	100.0
KOG1180		678	consensus Acyl-CoA synthetase [Lipid transport and	100.0
PF00501		417	AMP-binding: AMP-binding enzyme; InterPro: IPR0008	100.0
TIGR01733		408	AA-adenyl-dom amino acid adenylation domain. This	100.0
PRK07824		358	O-succinylbenzoic acid--CoA ligase; Provisional	100.0
PTZ00297		1452	pantothenate kinase; Provisional	100.0
COG1020		642	EntF Non-ribosomal peptide synthetase modules and	100.0
TIGR02372		386	4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv	100.0
TIGR02155		422	PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet	100.0
TIGR03335		445	F390_ftsA coenzyme F390 synthetase. This enzyme, c	100.0
KOG3628		1363	consensus Predicted AMP-binding protein [General f	99.98
KOG1178		1032	consensus Non-ribosomal peptide synthetase/alpha-a	99.98
COG1541		438	PaaK Coenzyme F390 synthetase [Coenzyme metabolism	99.97
TIGR03089		227	conserved hypothetical protein TIGR03089. This pro	99.93
KOG3628		1363	consensus Predicted AMP-binding protein [General f	99.86
PRK09188		365	serine/threonine protein kinase; Provisional	99.86
TIGR02304		430	aden_form_hyp probable adenylate-forming enzyme. M	99.81
PF04443		365	LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR	99.32
PF13193		73	AMP-binding_C: AMP-binding enzyme C-terminal domai	99.27
PF03321		528	GH3: GH3 auxin-responsive promoter; InterPro: IPR0	98.93
PLN02249		597	indole-3-acetic acid-amido synthetase	98.5
PLN02620		612	indole-3-acetic acid-amido synthetase	98.34
PLN02247		606	indole-3-acetic acid-amido synthetase	98.24
PF14535		96	AMP-binding_C_2: AMP-binding enzyme C-terminal dom	97.59
COG1541		438	PaaK Coenzyme F390 synthetase [Coenzyme metabolism	94.53
TIGR03335		445	F390_ftsA coenzyme F390 synthetase. This enzyme, c	84.81
TIGR02155		422	PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet	84.26

>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=8.3e-81  Score=621.33  Aligned_cols=490  Identities=44%  Similarity=0.735  Sum_probs=427.6

Q ss_pred             cEEEeC-CCCceeeHHHHHHHHHHHHHHHHHCC--CCCCCEEEEECCCCCcHHHHHHHHHHcCCeEecCCCCCCHHHHHH
Q 008946           50 TAFIDA-ATGRHLTFSELWRAVDSVSTCLSDMG--IRKGHVILLLSPNSIFFPVVCLAVMSLGAIITTTNPLNTKQEIAK  126 (548)
Q Consensus        50 ~a~~~~-~~~~~~Ty~~l~~~~~~la~~L~~~g--~~~g~~V~i~~~~~~~~~v~~lA~~~~G~~~v~l~~~~~~~~~~~  126 (548)
                      +.++.. .+++.+||.|++.++.++|..|.++|  +++||+|++++||++++.+++|||+.+|+++.+++|.+.+.++.+
T Consensus        34 ~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~  113 (537)
T KOG1176|consen   34 TSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAK  113 (537)
T ss_pred             ceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHH
Confidence            555544 33799999999999999999999875  789999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCeEEEEcCcccccccCC----CCcEEEecCCCC-cccCCc-cccccccccccCCCCCCccccCCCCCCEEEEEc
Q 008946          127 QIADSKPVLAFTISQLVPKLAGS----TLPIVLLDDEKT-TSTEGI-KTVTTLPQMMRKEPSGTLVRDRINQDDVATLLY  200 (548)
Q Consensus       127 ~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  200 (548)
                      .++.++++++|++.+..+.+...    ...++++..... ...... ........ ......... ......+|++.++|
T Consensus       114 ~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~dd~~~il~  191 (537)
T KOG1176|consen  114 QLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFED-LMPEGLPDG-IRPVSEDDTAAILY  191 (537)
T ss_pred             HHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhh-ccccCCCcc-cccCCCCCeEEEec
Confidence            99999999999999988877541    255555554311 011100 00110110 111111111 45567799999999


Q ss_pred             CCCCCCcchhHhhhHHHHHHHHHHHhhccccCCCCeEEEEccchHHHHhHHHHHHHHHHcCCEEEEcCCCCHHHHHHHHh
Q 008946          201 SSGTTGASKGVVSSHRNLIAMVQTVLGRFKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSKFDMHEMLSSIS  280 (548)
Q Consensus       201 TSGtTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~  280 (548)
                      ||||||.||||.+||+++..+.......+ ....+++.++.+|++|.+|+...+...+..|++++....+++..+++.++
T Consensus       192 SSGTTg~PKgV~lsHr~~~~~~~~~~~~~-~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~  270 (537)
T KOG1176|consen  192 SSGTTGLPKGVVLSHRNLIANTLSIKIGW-ELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIE  270 (537)
T ss_pred             CCCCCCCCceEEEecHHHHHHHHHhhhcc-cCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHH
Confidence            99999999999999999988876655554 34558899999999999999877777888888888888899999999999


Q ss_pred             hccceEEecchHHHHHHHhCcccccccCCCCccceeeecCCCCCHHHHHHHHHHCCCCeEEeeeccccccCcccccCCcc
Q 008946          281 KYRATYLPLVPPILVALISGADQIRSKYDLSSLQSVLSGGAPLSREVIEGFVQKYPKVRILQGYGLTESTGIGASTDSLE  360 (548)
Q Consensus       281 ~~~~t~l~~~P~~~~~l~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~  360 (548)
                      +|++|++.++|.++..|++....  ...+++++|.+.+||+++++++.+.+.+.+|...+...||+||+|+.++.+...+
T Consensus       271 kykvt~~~~vP~~~~~l~~~p~~--~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~  348 (537)
T KOG1176|consen  271 KYKVTHLFLVPPVLNMLAKSPIV--KKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGP  348 (537)
T ss_pred             HhCEEEEEcChHHHHHHhcCCcc--CcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCc
Confidence            99999999999999999998733  5678999999999999999999999999997789999999999998877765444


Q ss_pred             ccCCCCcccccCCCceEEEEcCCCCcccCCCCccEEEEeCCcccccccCCCccCccccCCCCeeecCceeEEcCCCcEEE
Q 008946          361 ESRKYGTAGMLSPSMEAKIVDPDSGKALLVNQTGELWLKGPSIMKGYFSNPEATTSTLDSEGWLRTGDLCYIDDDGFIFI  440 (548)
Q Consensus       361 ~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~  440 (548)
                      . .+.+++|.+++++...+.+ ++|+.+++++.||||++|+.++.||+++|+.|.+.|+.+|||+|||+|++|+||+|++
T Consensus       349 e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~I  426 (537)
T KOG1176|consen  349 E-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYI  426 (537)
T ss_pred             c-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEE
Confidence            4 5789999999988887777 8899999999999999999999999999999999998889999999999999999999


Q ss_pred             EcccCceeeeCceeeChHHHHHHHhcCCCcceeEEEeecCCCCCceeeEEEEecCCCCCCHHHHHHHHHhccCCCCceeE
Q 008946          441 VDRLKELIKYKGYQVPPAELEALLLTHPKISDAAVVPFPDKEAGQYPMAYVVREAGSRLSENEVMDFVARQVAPYKRVRR  520 (548)
Q Consensus       441 ~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~  520 (548)
                      .+|++|+||.+|++|+|.|||.+|.+||.|.|++|++.+++..|+.+.|+|+..++..++++++.+++++++++|++|..
T Consensus       427 vdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l~~y~~~~~  506 (537)
T KOG1176|consen  427 VDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKLPAYKLPGG  506 (537)
T ss_pred             ecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhCChhhccCe
Confidence            99999999999999999999999999999999999999999999999999999998999999999999999999999999


Q ss_pred             EEEeecCCCCCCcccchHHHHHHHHh
Q 008946          521 VAFVASIPKNPSGKILRKDLIKLATS  546 (548)
Q Consensus       521 i~~~~~lP~t~~GKv~R~~l~~~~~~  546 (548)
                      +.++++||+|++|||+|+.|++++.+
T Consensus       507 V~Fvd~lPKs~~GKi~R~~lr~~~~~  532 (537)
T KOG1176|consen  507 VVFVDELPKTPNGKILRRKLRDIAKK  532 (537)
T ss_pred             EEEeccCCCCCcchHHHHHHHHHHHh
Confidence            99999999999999999999999876

>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]	Back alignment and domain information

>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]	Back alignment and domain information

>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>PLN02574 4-coumarate--CoA ligase-like	Back alignment and domain information

>PLN02654 acetate-CoA ligase	Back alignment and domain information

>TIGR02316 propion_prpE propionate--CoA ligase	Back alignment and domain information

>PLN02860 o-succinylbenzoate-CoA ligase	Back alignment and domain information

>PTZ00237 acetyl-CoA synthetase; Provisional	Back alignment and domain information

>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase	Back alignment and domain information

>PLN02246 4-coumarate--CoA ligase	Back alignment and domain information

>PRK07788 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK00174 acetyl-CoA synthetase; Provisional	Back alignment and domain information

>PLN02330 4-coumarate--CoA ligase-like 1	Back alignment and domain information

>PRK07529 AMP-binding domain protein; Validated	Back alignment and domain information

>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed	Back alignment and domain information

>PRK05677 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated	Back alignment and domain information

>PRK10524 prpE propionyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK04319 acetyl-CoA synthetase; Provisional	Back alignment and domain information

>PLN02736 long-chain acyl-CoA synthetase	Back alignment and domain information

>PRK05852 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK03584 acetoacetyl-CoA synthetase; Provisional	Back alignment and domain information

>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>PRK06839 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK08314 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK06060 acyl-CoA synthetase; Validated	Back alignment and domain information

>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase	Back alignment and domain information

>PRK13382 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK05605 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK07656 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK08315 AMP-binding domain protein; Validated	Back alignment and domain information

>PRK06145 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK12583 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK08316 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK07638 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK07514 malonyl-CoA synthase; Validated	Back alignment and domain information

>PRK09274 peptide synthase; Provisional	Back alignment and domain information

>PRK07867 acyl-CoA synthetase; Validated	Back alignment and domain information

>PLN02614 long-chain acyl-CoA synthetase	Back alignment and domain information

>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional	Back alignment and domain information

>PLN03102 acyl-activating enzyme; Provisional	Back alignment and domain information

>PRK09088 acyl-CoA synthetase; Validated	Back alignment and domain information

>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase	Back alignment and domain information

>PLN03052 acetate--CoA ligase; Provisional	Back alignment and domain information

>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase	Back alignment and domain information

>PRK07786 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK06087 short chain acyl-CoA synthetase; Reviewed	Back alignment and domain information

>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>PRK06187 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK05857 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK06710 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK10946 entE enterobactin synthase subunit E; Provisional	Back alignment and domain information

>PRK06178 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated	Back alignment and domain information

>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>PRK13388 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK07769 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK07470 acyl-CoA synthetase; Validated	Back alignment and domain information

>PTZ00342 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK06164 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK12467 peptide synthase; Provisional	Back alignment and domain information

>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated	Back alignment and domain information

>PLN02861 long-chain-fatty-acid-CoA ligase	Back alignment and domain information

>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated	Back alignment and domain information

>PRK06018 putative acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK07008 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK06188 acyl-CoA synthetase; Validated	Back alignment and domain information

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase	Back alignment and domain information

>PRK07787 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK08279 long-chain-acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional	Back alignment and domain information

>PRK12476 putative fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated	Back alignment and domain information

>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]	Back alignment and domain information

>PRK13383 acyl-CoA synthetase; Provisional	Back alignment and domain information

>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1	Back alignment and domain information

>PRK10252 entF enterobactin synthase subunit F; Provisional	Back alignment and domain information

>PRK05620 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed	Back alignment and domain information

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	Back alignment and domain information

>PRK13390 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK12316 peptide synthase; Provisional	Back alignment and domain information

>PLN02387 long-chain-fatty-acid-CoA ligase family protein	Back alignment and domain information

>PRK12316 peptide synthase; Provisional	Back alignment and domain information

>PRK08180 feruloyl-CoA synthase; Reviewed	Back alignment and domain information

>PRK12467 peptide synthase; Provisional	Back alignment and domain information

>PRK08974 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>TIGR02262 benz_CoA_lig benzoate-CoA ligase family	Back alignment and domain information

>TIGR03205 pimA dicarboxylate--CoA ligase PimA	Back alignment and domain information

>PTZ00216 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	Back alignment and domain information

>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional	Back alignment and domain information

>PLN02479 acetate-CoA ligase	Back alignment and domain information

>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]	Back alignment and domain information

>PRK05691 peptide synthase; Validated	Back alignment and domain information

>PRK08276 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK07868 acyl-CoA synthetase; Validated	Back alignment and domain information

>PLN02430 long-chain-fatty-acid-CoA ligase	Back alignment and domain information

>PRK13391 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK05691 peptide synthase; Validated	Back alignment and domain information

>PRK07798 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK12582 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK08162 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional	Back alignment and domain information

>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>PRK09192 acyl-CoA synthetase; Validated	Back alignment and domain information

>PLN03051 acyl-activating enzyme; Provisional	Back alignment and domain information

>PRK05850 acyl-CoA synthetase; Validated	Back alignment and domain information

>TIGR01923 menE O-succinylbenzoate-CoA ligase	Back alignment and domain information

>PRK08308 acyl-CoA synthetase; Validated	Back alignment and domain information

>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]	Back alignment and domain information

>PRK07768 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]	Back alignment and domain information

>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]	Back alignment and domain information

>TIGR01733 AA-adenyl-dom amino acid adenylation domain	Back alignment and domain information

>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>PTZ00297 pantothenate kinase; Provisional	Back alignment and domain information

>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family	Back alignment and domain information

>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase	Back alignment and domain information

>TIGR03335 F390_ftsA coenzyme F390 synthetase	Back alignment and domain information

>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]	Back alignment and domain information

>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]	Back alignment and domain information

>TIGR03089 conserved hypothetical protein TIGR03089	Back alignment and domain information

>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]	Back alignment and domain information

>PRK09188 serine/threonine protein kinase; Provisional	Back alignment and domain information

>TIGR02304 aden_form_hyp probable adenylate-forming enzyme	Back alignment and domain information

>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria	Back alignment and domain information

>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B	Back alignment and domain information

>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin	Back alignment and domain information

>PLN02249 indole-3-acetic acid-amido synthetase	Back alignment and domain information

>PLN02620 indole-3-acetic acid-amido synthetase	Back alignment and domain information

>PLN02247 indole-3-acetic acid-amido synthetase	Back alignment and domain information

>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B	Back alignment and domain information

>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]	Back alignment and domain information

>TIGR03335 F390_ftsA coenzyme F390 synthetase	Back alignment and domain information

>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		548
3a9u_A		536	Crystal Structures And Enzymatic Mechanisms Of A Po		2e-93
3tsy_A		979	4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr		1e-91
3qya_A		582	Crystal Structure Of A Red-Emitter Mutant Of Lampyr		3e-81
2d1q_A		548	Crystal Structure Of The Thermostable Japanese Fire		3e-79
2d1t_A		548	Crystal Structure Of The Thermostable Japanese Fire		4e-79
2d1s_A		548	Crystal Structure Of The Thermostable Japanese Fire		5e-79
3iep_A		551	Firefly Luciferase Apo Structure (P41 Form) Length		3e-78
4g36_A		555	Photinus Pyralis Luciferase In The Adenylate-Formin		3e-78
1ba3_A		550	Firefly Luciferase In Complex With Bromoform Length		4e-78
4g37_A		555	Structure Of Cross-Linked Firefly Luciferase In Sec		2e-76
3r44_A		517	Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas		7e-50
3g7s_A		549	Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li		2e-49
4fuq_A		503	Crystal Structure Of Apo Matb From Rhodopseudomonas		6e-43
1ult_A		541	Crystal Structure Of Tt0168 From Thermus Thermophil		2e-39
3ipl_A		501	Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig		5e-38
3nyq_A		505	Malonyl-Coa Ligase Ternary Product Complex With Met		2e-36
3ivr_A		509	Crystal Structure Of Putative Long-Chain-Fatty-Acid		2e-35
4fut_A		503	Crystal Structure Of Atp Bound Matb From Rhodopseud		6e-35
4gxq_A		506	Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer		5e-33
4gxr_A		503	Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len		1e-32
1mdb_A		539	Crystal Structure Of Dhbe In Complex With Dhb-adeny		1e-31
2v7b_A		529	Crystal Structures Of A Benzoate Coa Ligase From Bu		2e-31
2qvx_X		504	4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO		2e-31
3cw8_X		504	4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb		7e-31
2qvz_X		504	4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO		1e-30
2p20_A		652	Acetyl-Coa Synthetase, R584a Mutation Length = 652		1e-30
3etc_A		580	2.1 A Structure Of Acyl-Adenylate Synthetase From M		2e-30
1t5d_X		504	4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl		2e-30
2p2b_A		652	Acetyl-coa Synthetase, V386a Mutation Length = 652		2e-30
3dlp_X		504	4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P,		3e-30
2p2m_A		652	Acetyl-Coa Synthetase, R194a Mutation Length = 652		4e-30
2p2f_A		652	Acetyl-coa Synthetase, Wild-type With Acetate, Amp,		6e-30
2p2q_A		652	Acetyl-Coa Synthetase, R584e Mutation Length = 652		6e-30
1md9_A		539	Crystal Structure Of Dhbe In Complex With Dhb And A		9e-30
1t5h_X		504	4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE		1e-29
1pg3_A		652	Acetyl Coa Synthetase, Acetylated On Lys609 Length		2e-29
2p2j_A		652	Acetyl-Coa Synthetase, K609a Mutation Length = 652		3e-29
3t5b_A		396	Crystal Structure Of N-Terminal Domain Of Facl13 Fr		1e-28
3rg2_A		617	Structure Of A Two-Domain Nrps Fusion Protein Conta		2e-28
4gr5_A		570	Crystal Structure Of Slgn1deltaasub In Complex With		1e-26
3o82_A		544	Structure Of Base N-Terminal Domain From Acinetobac		1e-26
3kxw_A		590	The Crystal Structure Of Fatty Acid Amp Ligase From		1e-25
1ry2_A		663	Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe		1e-25
3l8c_A		521	Structure Of Probable D-Alanine--Poly(Phosphoribito		2e-22
3fcc_A		512	Crystal Structure Of Dlta Protein In Complex With A		4e-22
3dhv_A		512	Crystal Structure Of Dlta Protein In Complex With D		4e-22
3b7w_A		570	Crystal Structure Of Human Acyl-Coa Synthetase Medi		1e-20
2wd9_A		569	Crystal Structure Of Human Acyl-coa Synthetase Medi		1e-20
3e7w_A		511	Crystal Structure Of Dlta: Implications For The Rea		5e-20
3vnq_A		544	Co-crystal Structure Of Nrps Adenylation Protein Cy		1e-17
2vsq_A		1304	Structure Of Surfactin A Synthetase C (Srfa-C), A N		2e-17
3pbk_A		583	Structural And Functional Studies Of Fatty Acyl-Ade		3e-17
1amu_A		563	Phenylalanine Activating Domain Of Gramicidin Synth		2e-14
4gr4_A		469	Crystal Structure Of Slgn1deltaasub Length = 469		5e-14
3t5a_A		480	Crystal Structure Of N-Terminal Domain Of Faal28 G3		1e-13
3e53_A		480	Crystal Structure Of N-Terminal Domain Of A Fatty A		7e-13
4dg8_A		620	Structure Of Pa1221, An Nrps Protein Containing Ade		9e-10
3ite_A		562	The Third Adenylation Domain Of The Fungal Sidn Non		2e-05

>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536