Citrus Sinensis ID: 008993

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------
MNIYVAISATIALALSIFSFPLLNNFYLLKLTPATTTTTTTNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEccEEEEccccccEEEEEEEEccEEEEEccHHHHHHHcccccEEEEccccEEEcccccccccHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHccccEEEEEEcccHHHHHHHHHHHHcccccccccccccEEEEcccccccEEEHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHcccccccEEEcEEEEEEccccccccccccccEEEEccHHHHHHHHHHHHHHHHHcccccccccEEEcccccccHHHHHHHcccEEEEccccccccHHHHHHHHcHHHHcccccHHHHHHHcccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccEEEEccccccccccccccEEcEEEEccEEEcc
ccHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccccccccccccccEEEEccEEEEccccccEEEEEEEEccEEEEEccHHHHHHHcccccEEEEccccEEEEcEEEEEEcHHHccHcccEEcccccccHHHHHHHHHHHHHHcccccEEEEccccHHHcccccccHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHccccccccccccEEEEccccccccHHHHcHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccHHHHHHHHHHHccccEEEEEEEEccccHHHHHHHHHcccccccHHcccccEEEEEcccccccHHcccHHHEEHcHHHHHHHHHHHHHHHHHHccccccccEEEEHEEccHHHHHHHHHccccEEccccHHHccHHHHHHHHcHHHHHHccHHHHHHHHcccEEEEccccccccccHHHHHHHHHccccccccccccHHHcccHHHHHHHHHcccHHHHccccccEEEccccEEEEEEEccccccccHHHcEEEEEEEEEccEEEcc
MNIYVAISATIALALSIFSfpllnnfyllkltpatttttttnleadlvvtngviftgddsllFADSmaikngrivsVGNYSAVQQLAadgtnvlnlqgkvvvpgfidshvhfipgGLQMARVKLRGVSHKDEFVRRVKEAVKnskkgswilgggwnndlwggdlpmaswidditphnpvwlsrmdghmgLANSVALQLVGitnlsedpnggtimktssgeptGLLIDAAMKLIlpwipevsvDERREALLRASNLAlsrgvttvvdfgryypgesvqlswEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVkafadgslgsnsaLFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLasgtaarfgdqgivasmqpqhlldDADSARKKLGVDRAERESYLFQSLLANNALLalgsdwpvadinpLCAIRTAmkrippgwdnawipseriSLTDALIAHTLSAARACFlendvgslspgkiADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP
MNIYVAISATIALALSIFSFPLLNNFYLLKLTPATTTttttnleadlvVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKeavknskkgswilggGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRAsnlalsrgvttvvDFGRYYpgesvqlsweDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP
MNIYVaisatialalsiFSFPLLNNFYLLKLTPAtttttttNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWIlgggwnndlwggdlPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDerreallrasnlalsrGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSllannallalGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP
*********************************************DLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL*****************TGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIV**************************ESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVS******
*******SATIALALSIFSFPLLNNFYLLKLTPATTT*TTTNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP
MNIYVAISATIALALSIFSFPLLNNFYLLKLTPATTTTTTTNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP
MNIYVAISATIALALSIFSFPLLNNFYLLKLTPATTTTTTTNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNIYVAISATIALALSIFSFPLLNNFYLLKLTPATTTTTTTNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query547 2.2.26 [Sep-21-2011]
O34355529 Putative amidohydrolase Y yes no 0.864 0.894 0.292 2e-48
Q68AP4542 N-substituted formamide d N/A no 0.888 0.896 0.270 2e-32
Q06555465 Exoenzymes regulatory pro N/A no 0.592 0.696 0.235 1e-15
A0AJJ5579 Adenine deaminase OS=List no no 0.106 0.100 0.394 8e-06
P39761577 Adenine deaminase OS=Baci no no 0.111 0.105 0.362 3e-05
Q1MCV9570 Urease subunit alpha OS=R no no 0.120 0.115 0.364 4e-05
B5ZMP0570 Urease subunit alpha OS=R no no 0.120 0.115 0.364 5e-05
B3PXB3570 Urease subunit alpha OS=R no no 0.120 0.115 0.364 6e-05
Q2K517570 Urease subunit alpha OS=R yes no 0.120 0.115 0.364 6e-05
B2V525581 Adenine deaminase OS=Clos no no 0.107 0.101 0.410 6e-05
>sp|O34355|YTCJ_BACSU Putative amidohydrolase YtcJ OS=Bacillus subtilis (strain 168) GN=ytcJ PE=4 SV=1 Back     alignment and function desciption
 Score =  194 bits (492), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 158/541 (29%), Positives = 249/541 (46%), Gaps = 68/541 (12%)

Query: 52  GVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQ-LAADGTNVLNLQGKVVVPGFIDSHV 110
           G I+T  +     +++ +++G I   G+Y  +++   +  T  ++L G V+ PGF+DSH+
Sbjct: 8   GFIYTMLEEGDRTEAVYVEDGVIKGTGSYERLKEKYGSPETEEISLNGAVMFPGFVDSHL 67

Query: 111 HFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWN-NDLWGGDLPMASW 169
           H I  G +  ++ L  ++ KD  ++  KE  +   K  W++G GWN N     D      
Sbjct: 68  HLIGHGEKQLQLDLSALTSKDSILQAAKERERQLPKNDWLIGEGWNENQFETPDYLTKHD 127

Query: 170 IDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAA 229
           +D + P  PV L R+  H    NS ALQ  GI+  + DP+GG I+K ++GEPTGLL D A
Sbjct: 128 LDRLFPDRPVLLKRICRHAIAVNSAALQAAGISRNTPDPDGGVIVKDANGEPTGLLFDKA 187

Query: 230 MKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADV--- 286
             LIL  +P VS     EAL  A     ++G+T          G S  LS+  + DV   
Sbjct: 188 QDLILKAVPPVSQHYVDEALTAAIKDCWTKGLTG---------GHSEDLSY--YGDVSVP 236

Query: 287 ---YQWASYSEKMKIRVCLFFPLET---WSSLADLINKTGHVLSDWVYLGGVKAFADGSL 340
              Y+ A+   K   R  L    E    W  L  L          +V  G +K FADG+L
Sbjct: 237 MKAYEKAAAGGKYPFRCHLLVHHEAVDRWEQLEKLSGP-------YVEFGAMKIFADGAL 289

Query: 341 GSNSALFH--------------------------------EVAIHAIGDRANDLVLDMYK 368
           G  +AL                                  EVA+HAIGD A + VL+  +
Sbjct: 290 GGRTALLKEPYQDDPSTNGVQVHDDETLGRLIRKAREKGMEVAVHAIGDLAFEKVLNAIE 349

Query: 369 SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAE 428
                 G+ D   R+ HAQ L +    R     I   +QP  +  D      +LG DR  
Sbjct: 350 KHPPKNGRHD---RLIHAQVLDNELIERAARMPIALDLQPHFVASDFPWVIDRLGKDRM- 405

Query: 429 RESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDN--AWIPSERISLTD 486
           + ++ +++L++   L A GSD P+  ++PL  I++A+ R      N  ++  SE + + +
Sbjct: 406 KTAFAWKTLISKGILCAGGSDAPIEPVDPLLGIQSAVLRKSSHEQNGPSYNESECLPVYE 465

Query: 487 ALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVS-ASIEATYVSGVQA 545
           A+  +T  +A   + E   G ++ G  ADF +LS   +    A++    I+ T ++G   
Sbjct: 466 AIKLYTEGSAGIIYKEKSRGKIAEGYDADFTVLSGDPFAIDPAQLHLLEIKKTVINGQIV 525

Query: 546 Y 546
           Y
Sbjct: 526 Y 526

Bacillus subtilis (strain 168) (taxid: 224308)
EC: 3EC: .EC: 5EC: .EC: -EC: .EC: -
>sp|Q68AP4|NFDA_ARTPS N-substituted formamide deformylase OS=Arthrobacter pascens GN=nfdA PE=1 SV=1 Back     alignment and function description
>sp|Q06555|AEPA_PECCC Exoenzymes regulatory protein AepA OS=Pectobacterium carotovorum subsp. carotovorum GN=aepA PE=4 SV=1 Back     alignment and function description
>sp|A0AJJ5|ADEC_LISW6 Adenine deaminase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=ade PE=3 SV=1 Back     alignment and function description
>sp|P39761|ADEC_BACSU Adenine deaminase OS=Bacillus subtilis (strain 168) GN=adeC PE=1 SV=2 Back     alignment and function description
>sp|Q1MCV9|URE1_RHIL3 Urease subunit alpha OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ureC PE=3 SV=1 Back     alignment and function description
>sp|B5ZMP0|URE1_RHILW Urease subunit alpha OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ureC PE=3 SV=1 Back     alignment and function description
>sp|B3PXB3|URE1_RHIE6 Urease subunit alpha OS=Rhizobium etli (strain CIAT 652) GN=ureC PE=3 SV=1 Back     alignment and function description
>sp|Q2K517|URE1_RHIEC Urease subunit alpha OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ureC PE=3 SV=1 Back     alignment and function description
>sp|B2V525|ADEC_CLOBA Adenine deaminase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=ade PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query547
255543987574 Exoenzymes regulatory protein aepA precu 0.983 0.937 0.699 0.0
359495042578 PREDICTED: putative amidohydrolase ytcJ- 0.919 0.870 0.718 0.0
356546356578 PREDICTED: putative amidohydrolase ytcJ- 0.987 0.934 0.644 0.0
31616517576 LAF3 isoform 2 [Arabidopsis thaliana] 0.994 0.944 0.640 0.0
186511115576 amidohydrolase family protein [Arabidops 0.994 0.944 0.640 0.0
297820330576 LAF3/LAF3 ISF1/LAF3 ISF2 [Arabidopsis ly 0.994 0.944 0.635 0.0
224075862517 predicted protein [Populus trichocarpa] 0.886 0.938 0.685 0.0
186511117583 amidohydrolase family protein [Arabidops 0.983 0.922 0.642 0.0
31616515583 LAF3 isoform 1 [Arabidopsis thaliana] 0.983 0.922 0.642 0.0
449449292545 PREDICTED: putative amidohydrolase YtcJ- 0.919 0.922 0.669 0.0
>gi|255543987|ref|XP_002513056.1| Exoenzymes regulatory protein aepA precursor, putative [Ricinus communis] gi|223548067|gb|EEF49559.1| Exoenzymes regulatory protein aepA precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/583 (69%), Positives = 473/583 (81%), Gaps = 45/583 (7%)

Query: 1   MNIYVAISATIALALSIFSFPLLNNFYLLKLTPATTTTTT----TNLEADLVVTNGVIFT 56
           MN    ISAT+ LALSIF         LL+ +    TTT+      L ADL+V NGVIFT
Sbjct: 1   MNFSTIISATVVLALSIF---------LLQWSKFGITTTSFSSSRELTADLIVKNGVIFT 51

Query: 57  GDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGG 116
            DDSL FADS A++NGRI+ VGNYS++Q LA +GT V+NL+GK+VVPGFIDSHVH I GG
Sbjct: 52  SDDSLPFADSFAVQNGRILRVGNYSSLQDLAGNGTKVVNLEGKLVVPGFIDSHVHLIFGG 111

Query: 117 LQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPH 176
           LQM RV+LRGV+ KDEFVRRV++AV+N K+GSW+LGGGWNNDLWGG+LP ASWIDDI P 
Sbjct: 112 LQMIRVELRGVNQKDEFVRRVRDAVRNLKEGSWVLGGGWNNDLWGGELPAASWIDDIAPK 171

Query: 177 NPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPW 236
           NPVWL+RMDGHMGLANSVAL+L GI NL EDPNGGTIM++++GEPTGL+IDAAMKLIL +
Sbjct: 172 NPVWLTRMDGHMGLANSVALKLAGINNLLEDPNGGTIMRSANGEPTGLIIDAAMKLILSY 231

Query: 237 IPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKM 296
           IPEVSVDE+REALL A NLAL RGVTTVVDFGRY+PG SV+ SWED +DVYQWA    KM
Sbjct: 232 IPEVSVDEKREALLIAGNLALMRGVTTVVDFGRYFPGASVEHSWEDLSDVYQWADSLGKM 291

Query: 297 KIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHE------- 349
           +IRVCLFFP+ETWS L+DLI K G  LSDW+YLGGVKAFADGSLGSNSALF+E       
Sbjct: 292 RIRVCLFFPMETWSRLSDLITKVGRALSDWIYLGGVKAFADGSLGSNSALFYEPYIGEPH 351

Query: 350 -------------------------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIE 384
                                    VAIHAIGDRAND+VLDMY+SVV T GKRD+RFRIE
Sbjct: 352 NYGLQVTDVENLFNMTVASDKVGLQVAIHAIGDRANDMVLDMYESVVSTNGKRDRRFRIE 411

Query: 385 HAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALL 444
           HAQHLASGTAARFG+QGI+AS+QP HLLDDADSA KKLG+DRA+  SY F+SLL++NA L
Sbjct: 412 HAQHLASGTAARFGEQGIIASVQPDHLLDDADSAIKKLGMDRAQNGSYQFRSLLSSNAQL 471

Query: 445 ALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEND 504
           ALGSDWPVA+INPL  I+TA+KRIPPGW+NAWIPSE +SL DA+IAHT+SAARACFL+ D
Sbjct: 472 ALGSDWPVANINPLGGIKTAVKRIPPGWENAWIPSECLSLKDAIIAHTISAARACFLDCD 531

Query: 505 VGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547
           +GSLSPGK+ADFVILST+SW+DF  E SA++EATYV+G QAYP
Sbjct: 532 LGSLSPGKLADFVILSTNSWDDFETEASAAVEATYVAGAQAYP 574

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359495042|ref|XP_002265500.2| PREDICTED: putative amidohydrolase ytcJ-like [Vitis vinifera] gi|296090331|emb|CBI40150.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356546356|ref|XP_003541592.1| PREDICTED: putative amidohydrolase ytcJ-like [Glycine max] Back     alignment and taxonomy information
>gi|31616517|gb|AAP55750.1| LAF3 isoform 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|186511115|ref|NP_567027.2| amidohydrolase family protein [Arabidopsis thaliana] gi|332645927|gb|AEE79448.1| amidohydrolase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297820330|ref|XP_002878048.1| LAF3/LAF3 ISF1/LAF3 ISF2 [Arabidopsis lyrata subsp. lyrata] gi|297323886|gb|EFH54307.1| LAF3/LAF3 ISF1/LAF3 ISF2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224075862|ref|XP_002304801.1| predicted protein [Populus trichocarpa] gi|222842233|gb|EEE79780.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|186511117|ref|NP_974445.2| amidohydrolase family protein [Arabidopsis thaliana] gi|332645928|gb|AEE79449.1| amidohydrolase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|31616515|gb|AAP55749.1| LAF3 isoform 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449449292|ref|XP_004142399.1| PREDICTED: putative amidohydrolase YtcJ-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query547
TAIR|locus:2081998583 LAF3 "LAF3 ISOFORM 2" [Arabido 0.590 0.554 0.587 5.2e-175
TIGR_CMR|CPS_2795557 CPS_2795 "amidohydrolase famil 0.528 0.518 0.317 5.5e-48
UNIPROTKB|Q0BWH5551 HNE_3497 "Putative lipoprotein 0.347 0.344 0.345 8.2e-37
UNIPROTKB|Q5LQG1554 SPO2529 "Uncharacterized prote 0.323 0.319 0.381 9.5e-37
TIGR_CMR|SPO_2529554 SPO_2529 "conserved hypothetic 0.323 0.319 0.381 9.5e-37
UNIPROTKB|Q81KU4522 BAS4541 "Uncharacterized prote 0.343 0.360 0.3 3.2e-32
TIGR_CMR|BA_4894522 BA_4894 "conserved hypothetica 0.343 0.360 0.3 3.2e-32
UNIPROTKB|Q5LKR5551 Q5LKR5 "Amidohydrolase domain 0.513 0.509 0.270 1.1e-31
TIGR_CMR|SPO_A0316551 SPO_A0316 "amidohydrolase doma 0.513 0.509 0.270 1.1e-31
ASPGD|ASPL0000004201549 AN10795 [Emericella nidulans ( 0.347 0.346 0.316 8.2e-31
TAIR|locus:2081998 LAF3 "LAF3 ISOFORM 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 997 (356.0 bits), Expect = 5.2e-175, Sum P(2) = 5.2e-175
 Identities = 195/332 (58%), Positives = 239/332 (71%)

Query:    21 PLLNNFY---LLKLTPAXXXXXXXNLEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSV 77
             PLLN+ Y   L  LTP         + ADL+VTNG IFT D SL FADSMAI+NGRI+ V
Sbjct:    28 PLLNDLYWSTLKSLTPPA------GIVADLLVTNGTIFTSDSSLPFADSMAIRNGRILKV 81

Query:    78 GNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRV 137
             G+++ ++    DGT  +NL+GK+VVPG IDSHVH I GGLQMA+V LRGVS KDEF + V
Sbjct:    82 GSFATLKGFIGDGTMEVNLEGKIVVPGLIDSHVHLISGGLQMAQVGLRGVSQKDEFCKMV 141

Query:   138 KEAVKNSKKGSWIXXXXXXXXXXXXXXPMASWIDDITPHNPVWLSRMDGHMGLANSVALQ 197
             K+AV+N+K+GSWI              P ASWID+I+P NPVWL RMDGHM LANS+AL+
Sbjct:   142 KDAVQNAKEGSWILGGGWNNDFWGGELPSASWIDEISPRNPVWLIRMDGHMALANSLALK 201

Query:   198 LVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDXXXXXXXXXXXXXX 257
             + G+ +L+EDP GGTIM+  SGEPTGLLIDAAM+L+ PW+ E+SVD              
Sbjct:   202 IAGVISLTEDPVGGTIMRMPSGEPTGLLIDAAMELVTPWVKEISVDERREALFRASKYAL 261

Query:   258 XXGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLIN 317
               GVTTV+D GRY+PG + +LSW+DF DVY +A  S+KM IR CLFFP+ TWS L DL  
Sbjct:   262 TRGVTTVIDLGRYFPGTTDELSWKDFQDVYLYADSSKKMMIRTCLFFPITTWSRLLDLKL 321

Query:   318 KTGHVLSDWVYLGGVKAFADGSLGSNSALFHE 349
             + G VLS+W+YLGGVKAF DGSLGSNSALF+E
Sbjct:   322 QKGSVLSEWLYLGGVKAFIDGSLGSNSALFYE 353
GO:0005737 "cytoplasm" evidence=ISM
GO:0016787 "hydrolase activity" evidence=ISS
GO:0016810 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds" evidence=IEA
GO:0048471 "perinuclear region of cytoplasm" evidence=IDA
GO:0007346 "regulation of mitotic cell cycle" evidence=RCA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TIGR_CMR|CPS_2795 CPS_2795 "amidohydrolase family protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|Q0BWH5 HNE_3497 "Putative lipoprotein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms
UNIPROTKB|Q5LQG1 SPO2529 "Uncharacterized protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2529 SPO_2529 "conserved hypothetical protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q81KU4 BAS4541 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4894 BA_4894 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q5LKR5 Q5LKR5 "Amidohydrolase domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_A0316 SPO_A0316 "amidohydrolase domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
ASPGD|ASPL0000004201 AN10795 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
cd01300479 cd01300, YtcJ_like, YtcJ_like metal dependent amid 1e-160
COG1574535 COG1574, COG1574, Predicted metal-dependent hydrol 1e-123
pfam07969392 pfam07969, Amidohydro_3, Amidohydrolase family 1e-45
cd01292275 cd01292, metallo-dependent_hydrolases, Superfamily 6e-13
cd01297415 cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D 1e-10
PRK09228433 PRK09228, PRK09228, guanine deaminase; Provisional 3e-10
PRK09356406 PRK09356, PRK09356, imidazolonepropionase; Validat 8e-10
pfam1359466 pfam13594, Amidohydro_5, Amidohydrolase 2e-09
cd01296371 cd01296, Imidazolone-5PH, Imidazolonepropionase/im 4e-09
cd01314447 cd01314, D-HYD, D-hydantoinases (D-HYD) also calle 4e-09
cd01315447 cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and A 6e-09
PRK08323459 PRK08323, PRK08323, phenylhydantoinase; Validated 8e-09
TIGR02967401 TIGR02967, guan_deamin, guanine deaminase 1e-08
cd01309359 cd01309, Met_dep_hydrolase_C, Metallo-dependent hy 1e-08
COG1001584 COG1001, AdeC, Adenine deaminase [Nucleotide trans 1e-07
cd01298411 cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enz 2e-07
COG0402421 COG0402, SsnA, Cytosine deaminase and related meta 2e-07
PRK13404477 PRK13404, PRK13404, dihydropyrimidinase; Provision 6e-07
PRK10657388 PRK10657, PRK10657, isoaspartyl dipeptidase; Provi 6e-07
pfam01979307 pfam01979, Amidohydro_1, Amidohydrolase family 6e-07
TIGR01178552 TIGR01178, ade, adenine deaminase 7e-07
COG3653579 COG3653, COG3653, N-acyl-D-aspartate/D-glutamate d 8e-07
cd01296371 cd01296, Imidazolone-5PH, Imidazolonepropionase/im 1e-06
PRK09237380 PRK09237, PRK09237, dihydroorotase; Provisional 1e-06
COG1228406 COG1228, HutI, Imidazolonepropionase and related a 1e-06
TIGR03178443 TIGR03178, allantoinase, allantoinase 2e-06
PRK12394379 PRK12394, PRK12394, putative metallo-dependent hyd 2e-06
PRK13207568 PRK13207, ureC, urease subunit alpha; Reviewed 2e-06
COG1228406 COG1228, HutI, Imidazolonepropionase and related a 3e-06
COG0804568 COG0804, UreC, Urea amidohydrolase (urease) alpha 4e-06
COG0044430 COG0044, PyrC, Dihydroorotase and related cyclic a 5e-06
PRK06038430 PRK06038, PRK06038, N-ethylammeline chlorohydrolas 6e-06
PRK09228433 PRK09228, PRK09228, guanine deaminase; Provisional 7e-06
PRK06189451 PRK06189, PRK06189, allantoinase; Provisional 9e-06
TIGR01224377 TIGR01224, hutI, imidazolonepropionase 1e-05
cd00854374 cd00854, NagA, N-acetylglucosamine-6-phosphate dea 2e-05
TIGR01792567 TIGR01792, urease_alph, urease, alpha subunit 2e-05
PRK09357423 PRK09357, pyrC, dihydroorotase; Validated 2e-05
cd00375567 cd00375, Urease_alpha, Urease alpha-subunit; Ureas 2e-05
COG3964386 COG3964, COG3964, Predicted amidohydrolase [Genera 3e-05
PRK09060444 PRK09060, PRK09060, dihydroorotase; Validated 3e-05
COG1820380 COG1820, NagA, N-acetylglucosamine-6-phosphate dea 4e-05
TIGR01975389 TIGR01975, isoAsp_dipep, isoaspartyl dipeptidase I 4e-05
cd01303429 cd01303, GDEase, Guanine deaminase (GDEase) 4e-05
PRK07203442 PRK07203, PRK07203, putative chlorohydrolase/amino 5e-05
cd01308387 cd01308, Isoaspartyl-dipeptidase, Isoaspartyl dipe 5e-05
PRK09356406 PRK09356, PRK09356, imidazolonepropionase; Validat 7e-05
cd00854374 cd00854, NagA, N-acetylglucosamine-6-phosphate dea 8e-05
PRK08204449 PRK08204, PRK08204, hypothetical protein; Provisio 8e-05
PRK08044449 PRK08044, PRK08044, allantoinase; Provisional 2e-04
PRK05985391 PRK05985, PRK05985, cytosine deaminase; Provisiona 2e-04
PRK07228445 PRK07228, PRK07228, N-ethylammeline chlorohydrolas 3e-04
PRK02382443 PRK02382, PRK02382, dihydroorotase; Provisional 3e-04
PRK13985568 PRK13985, ureB, urease subunit beta; Provisional 3e-04
TIGR02033454 TIGR02033, D-hydantoinase, D-hydantoinase 3e-04
TIGR01224377 TIGR01224, hutI, imidazolonepropionase 4e-04
cd01293398 cd01293, Bact_CD, Bacterial cytosine deaminase and 4e-04
cd01295 422 cd01295, AdeC, Adenine deaminase (AdeC) directly d 5e-04
PRK09061509 PRK09061, PRK09061, D-glutamate deacylase; Validat 5e-04
PRK13308569 PRK13308, ureC, urease subunit alpha; Reviewed 5e-04
PRK07572426 PRK07572, PRK07572, cytosine deaminase; Validated 6e-04
PRK08203451 PRK08203, PRK08203, hydroxydechloroatrazine ethyla 6e-04
TIGR00857411 TIGR00857, pyrC_multi, dihydroorotase, multifuncti 7e-04
PRK09045443 PRK09045, PRK09045, N-ethylammeline chlorohydrolas 7e-04
PRK09059429 PRK09059, PRK09059, dihydroorotase; Validated 7e-04
TIGR03583365 TIGR03583, EF_0837, probable amidohydrolase EF_083 8e-04
COG1820380 COG1820, NagA, N-acetylglucosamine-6-phosphate dea 0.001
PRK08393424 PRK08393, PRK08393, N-ethylammeline chlorohydrolas 0.001
cd01307338 cd01307, Met_dep_hydrolase_B, Metallo-dependent hy 0.001
TIGR02967401 TIGR02967, guan_deamin, guanine deaminase 0.002
PRK11170382 PRK11170, nagA, N-acetylglucosamine-6-phosphate de 0.002
PRK04250398 PRK04250, PRK04250, dihydroorotase; Provisional 0.002
PLN02303837 PLN02303, PLN02303, urease 0.002
PRK08204449 PRK08204, PRK08204, hypothetical protein; Provisio 0.003
PRK10027588 PRK10027, PRK10027, cryptic adenine deaminase; Pro 0.003
TIGR03314441 TIGR03314, Se_ssnA, putative selenium metabolism p 0.003
PRK09236444 PRK09236, PRK09236, dihydroorotase; Reviewed 0.003
PLN02795505 PLN02795, PLN02795, allantoinase 0.004
>gnl|CDD|238625 cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases Back     alignment and domain information 
 Score =  463 bits (1194), Expect = e-160
 Identities = 196/487 (40%), Positives = 271/487 (55%), Gaps = 44/487 (9%)

Query: 67  MAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRG 126
           +A+++GRIV+VG+ +  + L    T V++L+GK V+PGFIDSH H + GGL +  + L G
Sbjct: 2   VAVRDGRIVAVGSDAEAKALKGPATEVIDLKGKTVLPGFIDSHSHLLLGGLSLLWLDLSG 61

Query: 127 VSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGD-LPMASWIDDITPHNPVWLSRMD 185
           V+ K+E + R++E    +  G WILG GW+  L G    P  + +D ++P  PV L R D
Sbjct: 62  VTSKEEALARIREDAAAAPPGEWILGFGWDESLLGEGRYPTRAELDAVSPDRPVLLLRRD 121

Query: 186 GHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDER 245
           GH    NS AL+L GIT  + DP GG I++ + GEPTG+L++AA  L+L  +P  + +ER
Sbjct: 122 GHSAWVNSAALRLAGITRDTPDPPGGEIVRDADGEPTGVLVEAAAALVLEAVPPPTPEER 181

Query: 246 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSE-KMKIRVCLFF 304
           R AL  A+    S GVTTV D G             D     + A+  E  +++RV L+ 
Sbjct: 182 RAALRAAARELASLGVTTVHDAGGGAAD--------DIEAYRRLAAAGELTLRVRVALYV 233

Query: 305 PLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHE--------------- 349
                  L +L  +      D + LGGVK FADGSLGS +A   E               
Sbjct: 234 SPLAEDLLEELGARKNGAGDDRLRLGGVKLFADGSLGSRTAALSEPYLDSPGTGGLLLIS 293

Query: 350 -----------------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASG 392
                            VAIHAIGDRA D VLD  ++ +    + D R RIEHAQ ++  
Sbjct: 294 PEELEELVRAADEAGLQVAIHAIGDRAVDTVLDALEAALKDNPRADHRHRIEHAQLVSPD 353

Query: 393 TAARFGDQGIVASMQPQHLLDDADSA-RKKLGVDRAERESYLFQSLLANNALLALGSDWP 451
              RF   G++AS+QP HL  D D+A  ++LG +RA+R SY F+SLL     +ALGSD P
Sbjct: 354 DIPRFAKLGVIASVQPNHLYSDGDAAEDRRLGEERAKR-SYPFRSLLDAGVPVALGSDAP 412

Query: 452 VADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPG 511
           VA  +PL  I  A+ R  PG      P ER+SL +AL A+T+ AA A   E++ GSL PG
Sbjct: 413 VAPPDPLLGIWAAVTRKTPGGGVLGNPEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPG 472

Query: 512 KIADFVI 518
           K+ADFV+
Sbjct: 473 KLADFVV 479

YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling. Length = 479
>gnl|CDD|224490 COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>gnl|CDD|219672 pfam07969, Amidohydro_3, Amidohydrolase family Back     alignment and domain information
>gnl|CDD|238617 cd01292, metallo-dependent_hydrolases, Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>gnl|CDD|238622 cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics Back     alignment and domain information
>gnl|CDD|236419 PRK09228, PRK09228, guanine deaminase; Provisional Back     alignment and domain information
>gnl|CDD|236478 PRK09356, PRK09356, imidazolonepropionase; Validated Back     alignment and domain information
>gnl|CDD|222250 pfam13594, Amidohydro_5, Amidohydrolase Back     alignment and domain information
>gnl|CDD|238621 cd01296, Imidazolone-5PH, Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate Back     alignment and domain information
>gnl|CDD|238639 cd01314, D-HYD, D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin Back     alignment and domain information
>gnl|CDD|238640 cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology) Back     alignment and domain information
>gnl|CDD|236240 PRK08323, PRK08323, phenylhydantoinase; Validated Back     alignment and domain information
>gnl|CDD|132012 TIGR02967, guan_deamin, guanine deaminase Back     alignment and domain information
>gnl|CDD|238634 cd01309, Met_dep_hydrolase_C, Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>gnl|CDD|223933 COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|238623 cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases Back     alignment and domain information
>gnl|CDD|223479 COG0402, SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|184033 PRK13404, PRK13404, dihydropyrimidinase; Provisional Back     alignment and domain information
>gnl|CDD|182623 PRK10657, PRK10657, isoaspartyl dipeptidase; Provisional Back     alignment and domain information
>gnl|CDD|216825 pfam01979, Amidohydro_1, Amidohydrolase family Back     alignment and domain information
>gnl|CDD|130246 TIGR01178, ade, adenine deaminase Back     alignment and domain information
>gnl|CDD|226179 COG3653, COG3653, N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|238621 cd01296, Imidazolone-5PH, Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate Back     alignment and domain information
>gnl|CDD|236423 PRK09237, PRK09237, dihydroorotase; Provisional Back     alignment and domain information
>gnl|CDD|224149 COG1228, HutI, Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|163175 TIGR03178, allantoinase, allantoinase Back     alignment and domain information
>gnl|CDD|183497 PRK12394, PRK12394, putative metallo-dependent hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|237305 PRK13207, ureC, urease subunit alpha; Reviewed Back     alignment and domain information
>gnl|CDD|224149 COG1228, HutI, Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|223875 COG0804, UreC, Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|223122 COG0044, PyrC, Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|180363 PRK06038, PRK06038, N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|236419 PRK09228, PRK09228, guanine deaminase; Provisional Back     alignment and domain information
>gnl|CDD|235732 PRK06189, PRK06189, allantoinase; Provisional Back     alignment and domain information
>gnl|CDD|233321 TIGR01224, hutI, imidazolonepropionase Back     alignment and domain information
>gnl|CDD|238434 cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate Back     alignment and domain information
>gnl|CDD|130852 TIGR01792, urease_alph, urease, alpha subunit Back     alignment and domain information
>gnl|CDD|236479 PRK09357, pyrC, dihydroorotase; Validated Back     alignment and domain information
>gnl|CDD|238221 cd00375, Urease_alpha, Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide Back     alignment and domain information
>gnl|CDD|226473 COG3964, COG3964, Predicted amidohydrolase [General function prediction only] Back     alignment and domain information
>gnl|CDD|181632 PRK09060, PRK09060, dihydroorotase; Validated Back     alignment and domain information
>gnl|CDD|224733 COG1820, NagA, N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|131030 TIGR01975, isoAsp_dipep, isoaspartyl dipeptidase IadA Back     alignment and domain information
>gnl|CDD|238628 cd01303, GDEase, Guanine deaminase (GDEase) Back     alignment and domain information
>gnl|CDD|235963 PRK07203, PRK07203, putative chlorohydrolase/aminohydrolase; Validated Back     alignment and domain information
>gnl|CDD|238633 cd01308, Isoaspartyl-dipeptidase, Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid Back     alignment and domain information
>gnl|CDD|236478 PRK09356, PRK09356, imidazolonepropionase; Validated Back     alignment and domain information
>gnl|CDD|238434 cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate Back     alignment and domain information
>gnl|CDD|181288 PRK08204, PRK08204, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|169193 PRK08044, PRK08044, allantoinase; Provisional Back     alignment and domain information
>gnl|CDD|180337 PRK05985, PRK05985, cytosine deaminase; Provisional Back     alignment and domain information
>gnl|CDD|180895 PRK07228, PRK07228, N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|179417 PRK02382, PRK02382, dihydroorotase; Provisional Back     alignment and domain information
>gnl|CDD|184438 PRK13985, ureB, urease subunit beta; Provisional Back     alignment and domain information
>gnl|CDD|233694 TIGR02033, D-hydantoinase, D-hydantoinase Back     alignment and domain information
>gnl|CDD|233321 TIGR01224, hutI, imidazolonepropionase Back     alignment and domain information
>gnl|CDD|238618 cd01293, Bact_CD, Bacterial cytosine deaminase and related metal-dependent hydrolases Back     alignment and domain information
>gnl|CDD|238620 cd01295, AdeC, Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine Back     alignment and domain information
>gnl|CDD|236369 PRK09061, PRK09061, D-glutamate deacylase; Validated Back     alignment and domain information
>gnl|CDD|183965 PRK13308, ureC, urease subunit alpha; Reviewed Back     alignment and domain information
>gnl|CDD|181039 PRK07572, PRK07572, cytosine deaminase; Validated Back     alignment and domain information
>gnl|CDD|236184 PRK08203, PRK08203, hydroxydechloroatrazine ethylaminohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|233153 TIGR00857, pyrC_multi, dihydroorotase, multifunctional complex type Back     alignment and domain information
>gnl|CDD|236366 PRK09045, PRK09045, N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|181631 PRK09059, PRK09059, dihydroorotase; Validated Back     alignment and domain information
>gnl|CDD|132622 TIGR03583, EF_0837, probable amidohydrolase EF_0837/AHA_3915 Back     alignment and domain information
>gnl|CDD|224733 COG1820, NagA, N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|181411 PRK08393, PRK08393, N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|238632 cd01307, Met_dep_hydrolase_B, Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>gnl|CDD|132012 TIGR02967, guan_deamin, guanine deaminase Back     alignment and domain information
>gnl|CDD|183010 PRK11170, nagA, N-acetylglucosamine-6-phosphate deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|235265 PRK04250, PRK04250, dihydroorotase; Provisional Back     alignment and domain information
>gnl|CDD|215172 PLN02303, PLN02303, urease Back     alignment and domain information
>gnl|CDD|181288 PRK08204, PRK08204, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|182201 PRK10027, PRK10027, cryptic adenine deaminase; Provisional Back     alignment and domain information
>gnl|CDD|132357 TIGR03314, Se_ssnA, putative selenium metabolism protein SsnA Back     alignment and domain information
>gnl|CDD|181716 PRK09236, PRK09236, dihydroorotase; Reviewed Back     alignment and domain information
>gnl|CDD|178392 PLN02795, PLN02795, allantoinase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 547
COG1574535 Predicted metal-dependent hydrolase with the TIM-b 100.0
cd01300479 YtcJ_like YtcJ_like metal dependent amidohydrolase 100.0
PF07969404 Amidohydro_3: Amidohydrolase family; InterPro: IPR 100.0
PRK06687419 chlorohydrolase; Validated 100.0
PRK15493435 5-methylthioadenosine/S-adenosylhomocysteine deami 100.0
PRK09045443 N-ethylammeline chlorohydrolase; Provisional 100.0
PRK07228445 N-ethylammeline chlorohydrolase; Provisional 100.0
PRK08204449 hypothetical protein; Provisional 100.0
cd01298411 ATZ_TRZ_like TRZ/ATZ family contains enzymes from 100.0
PRK06038430 N-ethylammeline chlorohydrolase; Provisional 100.0
PRK09356406 imidazolonepropionase; Validated 100.0
PRK08203451 hydroxydechloroatrazine ethylaminohydrolase; Revie 100.0
PRK12393457 amidohydrolase; Provisional 100.0
PRK06380418 metal-dependent hydrolase; Provisional 100.0
PRK09228433 guanine deaminase; Provisional 100.0
PRK07203442 putative chlorohydrolase/aminohydrolase; Validated 100.0
PRK07213375 chlorohydrolase; Provisional 100.0
TIGR03314441 Se_ssnA putative selenium metabolism protein SsnA. 100.0
cd01303429 GDEase Guanine deaminase (GDEase). Guanine deamina 100.0
PRK06151488 N-ethylammeline chlorohydrolase; Provisional 100.0
PRK08393424 N-ethylammeline chlorohydrolase; Provisional 100.0
COG1228406 HutI Imidazolonepropionase and related amidohydrol 100.0
cd01293398 Bact_CD Bacterial cytosine deaminase and related m 100.0
TIGR02967401 guan_deamin guanine deaminase. This model describe 100.0
PRK09229456 N-formimino-L-glutamate deiminase; Validated 99.98
PRK07572426 cytosine deaminase; Validated 99.98
PRK08418408 chlorohydrolase; Provisional 99.98
cd01313418 Met_dep_hydrolase_E Metallo-dependent hydrolases, 99.97
PRK14085382 imidazolonepropionase; Provisional 99.97
TIGR01224377 hutI imidazolonepropionase. This enzyme catalyzes 99.97
PRK09230426 cytosine deaminase; Provisional 99.97
TIGR02022455 hutF formiminoglutamate deiminase. In some species 99.97
PRK05985391 cytosine deaminase; Provisional 99.97
PRK07583438 cytosine deaminase-like protein; Validated 99.97
cd01296371 Imidazolone-5PH Imidazolonepropionase/imidazolone- 99.97
PLN02942486 dihydropyrimidinase 99.97
COG0402421 SsnA Cytosine deaminase and related metal-dependen 99.97
cd01312381 Met_dep_hydrolase_D Metallo-dependent hydrolases, 99.96
PRK13309 572 ureC urease subunit alpha; Reviewed 99.96
KOG3968439 consensus Atrazine chlorohydrolase/guanine deamina 99.96
TIGR02033454 D-hydantoinase D-hydantoinase. This model represen 99.96
PRK09357423 pyrC dihydroorotase; Validated 99.96
cd01314447 D-HYD D-hydantoinases (D-HYD) also called dihydrop 99.96
cd01297415 D-aminoacylase D-aminoacylases (N-acyl-D-Amino aci 99.96
PRK07627425 dihydroorotase; Provisional 99.96
PRK15446383 phosphonate metabolism protein PhnM; Provisional 99.96
PRK13207 568 ureC urease subunit alpha; Reviewed 99.96
cd01299342 Met_dep_hydrolase_A Metallo-dependent hydrolases, 99.95
TIGR02318376 phosphono_phnM phosphonate metabolism protein PhnM 99.95
PRK08323459 phenylhydantoinase; Validated 99.95
PRK13206 573 ureC urease subunit alpha; Reviewed 99.95
cd01309359 Met_dep_hydrolase_C Metallo-dependent hydrolases, 99.95
PRK09236444 dihydroorotase; Reviewed 99.95
PRK06189451 allantoinase; Provisional 99.95
PRK07575438 dihydroorotase; Provisional 99.95
PRK12394379 putative metallo-dependent hydrolase; Provisional 99.95
cd01315447 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinas 99.95
PLN02795505 allantoinase 99.95
TIGR03178443 allantoinase allantoinase. This enzyme carries out 99.94
PRK09060444 dihydroorotase; Validated 99.94
PRK06846410 putative deaminase; Validated 99.94
PRK13985 568 ureB urease subunit beta; Provisional 99.94
PRK13404477 dihydropyrimidinase; Provisional 99.94
PRK09059429 dihydroorotase; Validated 99.94
PRK09061509 D-glutamate deacylase; Validated 99.94
TIGR01792 567 urease_alph urease, alpha subunit. This model desc 99.94
TIGR01975389 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-i 99.93
PRK02382443 dihydroorotase; Provisional 99.93
PRK09237380 dihydroorotase; Provisional 99.93
PRK13308 569 ureC urease subunit alpha; Reviewed 99.93
cd00375 567 Urease_alpha Urease alpha-subunit; Urease is a nic 99.93
PRK08044449 allantoinase; Provisional 99.93
COG0044430 PyrC Dihydroorotase and related cyclic amidohydrol 99.93
PRK10657388 isoaspartyl dipeptidase; Provisional 99.93
PLN02303 837 urease 99.93
COG1820380 NagA N-acetylglucosamine-6-phosphate deacetylase [ 99.92
TIGR01178 552 ade adenine deaminase. The family described by thi 99.92
PRK07369418 dihydroorotase; Provisional 99.92
KOG2584522 consensus Dihydroorotase and related enzymes [Nucl 99.91
PRK08417386 dihydroorotase; Provisional 99.91
PRK04250398 dihydroorotase; Provisional 99.9
TIGR00857411 pyrC_multi dihydroorotase, multifunctional complex 99.9
COG1001 584 AdeC Adenine deaminase [Nucleotide transport and m 99.89
PRK01211409 dihydroorotase; Provisional 99.89
COG3454377 Metal-dependent hydrolase involved in phosphonate 99.89
cd01308387 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hy 99.89
PRK10027588 cryptic adenine deaminase; Provisional 99.89
TIGR00221380 nagA N-acetylglucosamine-6-phosphate deacetylase. 99.89
PRK11170382 nagA N-acetylglucosamine-6-phosphate deacetylase; 99.88
PRK00369392 pyrC dihydroorotase; Provisional 99.88
cd01304541 FMDH_A Formylmethanofuran dehydrogenase (FMDH) sub 99.87
cd00854374 NagA N-acetylglucosamine-6-phosphate deacetylase, 99.87
COG3964386 Predicted amidohydrolase [General function predict 99.87
TIGR03121556 one_C_dehyd_A formylmethanofuran dehydrogenase sub 99.87
TIGR03583365 EF_0837 probable amidohydrolase EF_0837/AHA_3915. 99.82
cd01295 422 AdeC Adenine deaminase (AdeC) directly deaminates 99.82
cd01307338 Met_dep_hydrolase_B Metallo-dependent hydrolases, 99.81
COG3653579 N-acyl-D-aspartate/D-glutamate deacylase [Secondar 99.8
cd01318361 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; 99.8
cd01317374 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; 99.76
COG0804 568 UreC Urea amidohydrolase (urease) alpha subunit [A 99.76
cd01306325 PhnM PhnM is believed to be a subunit of the membr 99.76
PF01979333 Amidohydro_1: Amidohydrolase family; InterPro: IPR 99.74
cd01302337 Cyclic_amidohydrolases Cyclic amidohydrolases, inc 99.72
cd01305263 archeal_chlorohydrolases Predicted chlorohydrolase 99.7
COG1229575 FwdA Formylmethanofuran dehydrogenase subunit A [E 99.62
PRK06886329 hypothetical protein; Validated 99.59
PF13147304 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2 99.55
cd01316344 CAD_DHOase The eukaryotic CAD protein is a trifunc 99.47
KOG3892407 consensus N-acetyl-glucosamine-6-phosphate deacety 99.35
cd01292275 metallo-dependent_hydrolases Superfamily of metall 99.27
PF1359468 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1 99.16
cd01294335 DHOase Dihydroorotase (DHOase) catalyzes the rever 99.08
cd01320325 ADA Adenosine deaminase (ADA) is a monomeric zinc 99.0
TIGR01430324 aden_deam adenosine deaminase. This family include 98.88
PRK09358340 adenosine deaminase; Provisional 98.74
TIGR00856341 pyrC_dimer dihydroorotase, homodimeric type. This 98.32
PTZ00124362 adenosine deaminase; Provisional 98.27
cd00443305 ADA_AMPD Adenosine/AMP deaminase. Adenosine deamin 98.25
PRK05451345 dihydroorotase; Provisional 98.07
PLN02599364 dihydroorotase 97.97
cd01321345 ADGF Adenosine deaminase-related growth factors (A 97.89
TIGR00010252 hydrolase, TatD family. Several genomes have multi 97.77
PRK10812265 putative DNAse; Provisional 97.73
cd01310251 TatD_DNAse TatD like proteins; E.coli TatD is a cy 97.7
COG1816345 Add Adenosine deaminase [Nucleotide transport and 97.68
PF00962331 A_deaminase: Adenosine/AMP deaminase immunodeficie 97.51
PRK11449258 putative deoxyribonuclease YjjV; Provisional 97.25
cd00530293 PTE Phosphotriesterase (PTE) catalyzes the hydroly 97.15
TIGR01431479 adm_rel adenosine deaminase-related growth factor. 97.14
PRK09875292 putative hydrolase; Provisional 97.09
PRK10425258 DNase TatD; Provisional 97.03
COG0084256 TatD Mg-dependent DNase [DNA replication, recombin 96.83
KOG1097399 consensus Adenine deaminase/adenosine deaminase [N 96.77
PLN03055602 AMP deaminase; Provisional 95.52
cd01319496 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic 95.47
TIGR01429611 AMP_deaminase AMP deaminase. This model describes 95.31
PF00449121 Urease_alpha: Urease alpha-subunit, N-terminal dom 95.2
COG1099254 Predicted metal-dependent hydrolases with the TIM- 95.18
PLN02768835 AMP deaminase 94.64
PF02126308 PTE: Phosphotriesterase family; InterPro: IPR00155 94.57
PRK06361212 hypothetical protein; Provisional 93.82
PTZ00310 1453 AMP deaminase; Provisional 93.7
PTZ00310 1453 AMP deaminase; Provisional 93.51
PF12890142 DHOase: Dihydro-orotase-like; InterPro: IPR024403 92.75
PF01026255 TatD_DNase: TatD related DNase The Pfam entry find 91.48
COG0418344 PyrC Dihydroorotase [Nucleotide transport and meta 90.3
PRK00912237 ribonuclease P protein component 3; Provisional 86.56
PRK07328269 histidinol-phosphatase; Provisional 83.73
KOG2902344 consensus Dihydroorotase [Nucleotide transport and 83.35
PRK08392215 hypothetical protein; Provisional 81.09
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=1.7e-66  Score=532.58  Aligned_cols=495  Identities=38%  Similarity=0.592  Sum_probs=438.9

Q ss_pred             CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccc
Q 008993           43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV  122 (547)
Q Consensus        43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~  122 (547)
                      .+.++++.|++|++++...+....|.|+||||++||+......+..+.+++||++|++|+|||||+|.|+..++......
T Consensus         3 ~~adlil~nG~i~T~~~~~p~aeAvaI~dGrI~avG~~~~~~~~~~~~t~viDL~Gk~v~PGfvDaH~Hl~~~G~~~~~~   82 (535)
T COG1574           3 MAADLILHNGRIYTMDEARPTAEAVAIKDGRIVAVGSDAELKALAGPATEVIDLKGKFVLPGFVDAHLHLISGGLSLLEL   82 (535)
T ss_pred             cccceeEECCEEEeccCCCcceeEEEEcCCEEEEEcChHHHHhhcCCCceEEeCCCCEeccccchhhHHHHHhhhhhhcc
Confidence            45689999999999998777888999999999999999888777667889999999999999999999999999988777


Q ss_pred             ccCCCCCHHHHHHHHHHHHHcCCCCCeEE--EeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcC
Q 008993          123 KLRGVSHKDEFVRRVKEAVKNSKKGSWIL--GGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG  200 (547)
Q Consensus       123 ~~~g~~t~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g  200 (547)
                      .+.++++.+++.+.+++..+..+..+|+.  |++|+...|....|++..+|+++++.|+++.+.++|.+++|+++|+.+|
T Consensus        83 ~~~~~~~~~~~~~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~~~G  162 (535)
T COG1574          83 NLDGVRSLDDLLAALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALRLAG  162 (535)
T ss_pred             cccccCCHHHHHHHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHHHcC
Confidence            88899999999999999999888776655  5667788888889999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHH-HHHHHHhCCccEEEeCccCCCCcccccc
Q 008993          201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLR-ASNLALSRGVTTVVDFGRYYPGESVQLS  279 (547)
Q Consensus       201 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~  279 (547)
                      ++..++.+.||.+.+..+|+++|.+.|.+...+....+..+++...+.... +++.+.+.|+|+++++..+       ..
T Consensus       163 i~~~t~~p~gg~~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~~~-------~~  235 (535)
T COG1574         163 ITRDTPDPPGGIIGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMAGY-------QG  235 (535)
T ss_pred             CCCCCCCCCCCcccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEccccc-------cc
Confidence            999999999998889999999999999988888888888776666666555 8999999999999999851       23


Q ss_pred             hhHHHHHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhc----------
Q 008993          280 WEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHE----------  349 (547)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----------  349 (547)
                      ....+..++.+...+.+++++..........+ ...-.........++..+++|.|.||++++.++.+.+          
T Consensus       236 ~~~~~~~~r~~~~~~~l~~rv~~~l~~~~~~~-~~~~~~~~~~~~~~~~~g~~K~f~Dgslg~rtA~l~~~y~d~~~~~G  314 (535)
T COG1574         236 YYADYEAYRALAAGGELPVRVALLLFTEDLKE-ERLDLLRQTGAKGLLQGGGVKLFADGSLGERTALLAAPYADGPGPSG  314 (535)
T ss_pred             chhHHHHHHHHHhcCcceEEEEeeccccchhh-HHHhhcccCCccceeecCceEEEEeCCCCcchhhccCcccCCCCCCC
Confidence            35667899999999999999998776655443 1111112233456788899999999999999886544          


Q ss_pred             ----------------------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEec
Q 008993          350 ----------------------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQ  407 (547)
Q Consensus       350 ----------------------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~  407 (547)
                                            +.+|+.|+.+++.+++++|+....++..+.+.+++|..++++++++++++.|+.+++|
T Consensus       315 ~~l~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~LdafE~~~~~~~~~~~r~rieH~~~v~~~~i~R~~~Lgv~~svQ  394 (535)
T COG1574         315 ELLLTEEELEELVRAADERGLPVAVHAIGDGAVDAALDAFEKARKKNGLKGLRHRIEHAELVSPDQIERFAKLGVIASVQ  394 (535)
T ss_pred             CcccCHHHHHHHHHHHHHCCCcEEEEEechHHHHHHHHHHHHHhhhcCCccCCceeeeeeecCHhHHHHHHhcCceEeec
Confidence                                  9999999999999999999999999888889999999999999999999999999999


Q ss_pred             CccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHH
Q 008993          408 PQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDA  487 (547)
Q Consensus       408 p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a  487 (547)
                      |.+..++.+++..++|.+|. ...+|++.|.++|++++.|||+|+++.|||.+++.++.|....+.... .+..||.+||
T Consensus       395 P~f~~~~~~~~~~rlG~~r~-~~~~p~~~ll~~G~~la~gSD~Pv~~~dP~~~i~~AVtr~~~~g~~~~-~~~~L~~~eA  472 (535)
T COG1574         395 PNFLFSDGEWYVDRLGEERA-SRSYPFRSLLKAGVPLAGGSDAPVEPYDPWLGIYAAVTRKTPGGRVLG-PEERLTREEA  472 (535)
T ss_pred             cccccccchHHHHhhhhhhh-hccCcHHHHHHCCCeEeccCCCCCCCCChHHHHHHHHcCCCCCCCCCc-cccccCHHHH
Confidence            99998887899999999999 999999999999999999999999999999999999998765442211 2227999999


Q ss_pred             HHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcCCeEEEEEECcEEeCC
Q 008993          488 LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP  547 (547)
Q Consensus       488 l~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~~~v~~v~v~G~~v~~  547 (547)
                      |+++|.++|++.|.++++|+|++||.|||+|+|.|+|. +...+...+|..|+++|++||.
T Consensus       473 L~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~d~f~~~~~~i~~~~v~~T~~~Gk~VY~  533 (535)
T COG1574         473 LRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDRDPFTVDPDSIKDTKVVLTIVAGKVVYR  533 (535)
T ss_pred             HHHHhhhhHHhhhccccccccccCceeeEEEecCCcccCChHHhccceEEEEEEcCeEeec
Confidence            99999999999999999999999999999999999999 8888889999999999999995

>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases Back     alignment and domain information
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ] Back     alignment and domain information
>PRK06687 chlorohydrolase; Validated Back     alignment and domain information
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional Back     alignment and domain information
>PRK09045 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>PRK07228 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>PRK08204 hypothetical protein; Provisional Back     alignment and domain information
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases Back     alignment and domain information
>PRK06038 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>PRK09356 imidazolonepropionase; Validated Back     alignment and domain information
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed Back     alignment and domain information
>PRK12393 amidohydrolase; Provisional Back     alignment and domain information
>PRK06380 metal-dependent hydrolase; Provisional Back     alignment and domain information
>PRK09228 guanine deaminase; Provisional Back     alignment and domain information
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated Back     alignment and domain information
>PRK07213 chlorohydrolase; Provisional Back     alignment and domain information
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA Back     alignment and domain information
>cd01303 GDEase Guanine deaminase (GDEase) Back     alignment and domain information
>PRK06151 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>PRK08393 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases Back     alignment and domain information
>TIGR02967 guan_deamin guanine deaminase Back     alignment and domain information
>PRK09229 N-formimino-L-glutamate deiminase; Validated Back     alignment and domain information
>PRK07572 cytosine deaminase; Validated Back     alignment and domain information
>PRK08418 chlorohydrolase; Provisional Back     alignment and domain information
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PRK14085 imidazolonepropionase; Provisional Back     alignment and domain information
>TIGR01224 hutI imidazolonepropionase Back     alignment and domain information
>PRK09230 cytosine deaminase; Provisional Back     alignment and domain information
>TIGR02022 hutF formiminoglutamate deiminase Back     alignment and domain information
>PRK05985 cytosine deaminase; Provisional Back     alignment and domain information
>PRK07583 cytosine deaminase-like protein; Validated Back     alignment and domain information
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate Back     alignment and domain information
>PLN02942 dihydropyrimidinase Back     alignment and domain information
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only] Back     alignment and domain information
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PRK13309 ureC urease subunit alpha; Reviewed Back     alignment and domain information
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02033 D-hydantoinase D-hydantoinase Back     alignment and domain information
>PRK09357 pyrC dihydroorotase; Validated Back     alignment and domain information
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin Back     alignment and domain information
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics Back     alignment and domain information
>PRK07627 dihydroorotase; Provisional Back     alignment and domain information
>PRK15446 phosphonate metabolism protein PhnM; Provisional Back     alignment and domain information
>PRK13207 ureC urease subunit alpha; Reviewed Back     alignment and domain information
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM Back     alignment and domain information
>PRK08323 phenylhydantoinase; Validated Back     alignment and domain information
>PRK13206 ureC urease subunit alpha; Reviewed Back     alignment and domain information
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PRK09236 dihydroorotase; Reviewed Back     alignment and domain information
>PRK06189 allantoinase; Provisional Back     alignment and domain information
>PRK07575 dihydroorotase; Provisional Back     alignment and domain information
>PRK12394 putative metallo-dependent hydrolase; Provisional Back     alignment and domain information
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology) Back     alignment and domain information
>PLN02795 allantoinase Back     alignment and domain information
>TIGR03178 allantoinase allantoinase Back     alignment and domain information
>PRK09060 dihydroorotase; Validated Back     alignment and domain information
>PRK06846 putative deaminase; Validated Back     alignment and domain information
>PRK13985 ureB urease subunit beta; Provisional Back     alignment and domain information
>PRK13404 dihydropyrimidinase; Provisional Back     alignment and domain information
>PRK09059 dihydroorotase; Validated Back     alignment and domain information
>PRK09061 D-glutamate deacylase; Validated Back     alignment and domain information
>TIGR01792 urease_alph urease, alpha subunit Back     alignment and domain information
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA Back     alignment and domain information
>PRK02382 dihydroorotase; Provisional Back     alignment and domain information
>PRK09237 dihydroorotase; Provisional Back     alignment and domain information
>PRK13308 ureC urease subunit alpha; Reviewed Back     alignment and domain information
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide Back     alignment and domain information
>PRK08044 allantoinase; Provisional Back     alignment and domain information
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK10657 isoaspartyl dipeptidase; Provisional Back     alignment and domain information
>PLN02303 urease Back     alignment and domain information
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01178 ade adenine deaminase Back     alignment and domain information
>PRK07369 dihydroorotase; Provisional Back     alignment and domain information
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK08417 dihydroorotase; Provisional Back     alignment and domain information
>PRK04250 dihydroorotase; Provisional Back     alignment and domain information
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type Back     alignment and domain information
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK01211 dihydroorotase; Provisional Back     alignment and domain information
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid Back     alignment and domain information
>PRK10027 cryptic adenine deaminase; Provisional Back     alignment and domain information
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase Back     alignment and domain information
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional Back     alignment and domain information
>PRK00369 pyrC dihydroorotase; Provisional Back     alignment and domain information
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor Back     alignment and domain information
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate Back     alignment and domain information
>COG3964 Predicted amidohydrolase [General function prediction only] Back     alignment and domain information
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A Back     alignment and domain information
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915 Back     alignment and domain information
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine Back     alignment and domain information
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis Back     alignment and domain information
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis Back     alignment and domain information
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism] Back     alignment and domain information
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex Back     alignment and domain information
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily [] Back     alignment and domain information
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids Back     alignment and domain information
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases Back     alignment and domain information
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion] Back     alignment and domain information
>PRK06886 hypothetical protein; Validated Back     alignment and domain information
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F Back     alignment and domain information
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis Back     alignment and domain information
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B Back     alignment and domain information
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis Back     alignment and domain information
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively Back     alignment and domain information
>TIGR01430 aden_deam adenosine deaminase Back     alignment and domain information
>PRK09358 adenosine deaminase; Provisional Back     alignment and domain information
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type Back     alignment and domain information
>PTZ00124 adenosine deaminase; Provisional Back     alignment and domain information
>cd00443 ADA_AMPD Adenosine/AMP deaminase Back     alignment and domain information
>PRK05451 dihydroorotase; Provisional Back     alignment and domain information
>PLN02599 dihydroorotase Back     alignment and domain information
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase Back     alignment and domain information
>TIGR00010 hydrolase, TatD family Back     alignment and domain information
>PRK10812 putative DNAse; Provisional Back     alignment and domain information
>cd01310 TatD_DNAse TatD like proteins; E Back     alignment and domain information
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3 Back     alignment and domain information
>PRK11449 putative deoxyribonuclease YjjV; Provisional Back     alignment and domain information
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon Back     alignment and domain information
>TIGR01431 adm_rel adenosine deaminase-related growth factor Back     alignment and domain information
>PRK09875 putative hydrolase; Provisional Back     alignment and domain information
>PRK10425 DNase TatD; Provisional Back     alignment and domain information
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN03055 AMP deaminase; Provisional Back     alignment and domain information
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring Back     alignment and domain information
>TIGR01429 AMP_deaminase AMP deaminase Back     alignment and domain information
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3 Back     alignment and domain information
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>PLN02768 AMP deaminase Back     alignment and domain information
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3 Back     alignment and domain information
>PRK06361 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00310 AMP deaminase; Provisional Back     alignment and domain information
>PTZ00310 AMP deaminase; Provisional Back     alignment and domain information
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria Back     alignment and domain information
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition Back     alignment and domain information
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK00912 ribonuclease P protein component 3; Provisional Back     alignment and domain information
>PRK07328 histidinol-phosphatase; Provisional Back     alignment and domain information
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK08392 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
3igh_X486 Crystal Structure Of An Uncharacterized Metal-Depen 6e-21
3icj_A534 Crystal Structure Of An Uncharacterized Metal-Depen 5e-20
2fty_A559 Crystal Structure Of Dihydropyrimidinase From Sacch 1e-04
3ggm_A81 Crystal Structure Of Bt9727_2919 From Bacillus Thur 4e-04
2aqo_A390 Crystal Structure Of E. Coli Isoaspartyl Dipeptidas 8e-04
>pdb|3IGH|X Chain X, Crystal Structure Of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Horikoshii Ot3 Length = 486 Back     alignment and structure 
Iteration: 1

 Score = 99.0 bits (245), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 120/517 (23%), Positives = 210/517 (40%), Gaps = 98/517 (18%)
Query: 49  VTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAA-DGTNVLNLQGKVVVPGFID 107
           + NG I+T  + L     + I +G+++  G+    +++    G  +++L+GK V+P F D
Sbjct: 6   LINGTIYTSFNPLKKVSGLVISHGKVIYAGDSEVAKKIVELSGGEIVDLKGKYVMPAFFD 65
Query: 108 SHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAV---------KNSKKGSWIXXXXXXXX 158
           SH+H    G+ +  V LRG    +E ++R+K               + G W         
Sbjct: 66  SHLHLDELGMSLEMVDLRGAKSIEELIQRLKRGKGRIIFGFGWDQDELGEW--------- 116
Query: 159 XXXXXXPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSE-DPNGGTIMKTS 217
                 P    ++ I    PV++ R   H+ +AN   L+L+ +T   + D + G I + S
Sbjct: 117 ------PTRKELNAI--DKPVFIYRKCFHVAVANDKMLELLNLTPSKDFDEDTGIIKEKS 168
Query: 218 SGEPTGLLIDAAMKLILPWIPEVSVDXXXXXXXXXXXXXXXXGVTTVVDFGRYYPGESVQ 277
                   ++ A K+I   +  ++V+                GV +V          S  
Sbjct: 169 --------LEEARKVINERV--LTVEDYVYYIKRAQEHLLDLGVKSV----------SFM 208
Query: 278 LSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFAD 337
              E       +     K+ I V  +   E    L  +    G    + + + GVK F D
Sbjct: 209 SVNEKALRALFYLEREGKLSINVFAYVTPEVLDKLESI--GLGRFQGNRLTIAGVKLFTD 266
Query: 338 GSLGSNSALFH--------------------------------EVAIHAIGDRANDLVLD 365
           GSLG+ +AL                                  +VAIHAIGD+A D+ LD
Sbjct: 267 GSLGARTALLSKPYSDDPSTSGQLVMEREELIRITEKARSLGLDVAIHAIGDKALDVALD 326
Query: 366 MYKSVVVTTGKRDQRF--RIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLG 423
           +++    TTG     F  RIEHA  +      R  +  +  S+QP  ++ D     +++G
Sbjct: 327 VFE----TTG-----FPGRIEHASLVRDDQLERVKNLKVRLSVQPHFIISDW-WIVERVG 376
Query: 424 VDRAERESYLFQSXXXXXXXXXXGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSER-I 482
            +R  +  Y F+            +D P+   +P   +  A+ R         +  ++ +
Sbjct: 377 EERV-KWVYRFKD-LMKVAELGFSTDSPIEPADPWLTVDAAVNRGKGKVKLYELTKDQAL 434
Query: 483 SLTDALIAHTLSAARACFLENDVGSLSPGKIADFVIL 519
            + DAL ++T  +AR   L +D+G L PG  A+++IL
Sbjct: 435 DIKDALHSYTYGSARVS-LASDIGKLEPGFKAEYIIL 470
>pdb|3ICJ|A Chain A, Crystal Structure Of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Furiosus Length = 534 Back     alignment and structure
>pdb|2FTY|A Chain A, Crystal Structure Of Dihydropyrimidinase From Saccharomyces Kluyveri Length = 559 Back     alignment and structure
>pdb|3GGM|A Chain A, Crystal Structure Of Bt9727_2919 From Bacillus Thuringiensis Subsp. Northeast Structural Genomics Target Bur228b Length = 81 Back     alignment and structure
>pdb|2AQO|A Chain A, Crystal Structure Of E. Coli Isoaspartyl Dipeptidase Mutant E77q Length = 390 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
3icj_A534 Uncharacterized metal-dependent hydrolase; structu 1e-162
3ggm_A81 Uncharacterized protein BT9727_2919; bacillus cere 3e-28
2vun_A386 Enamidase; nicotinate degradation, binuclear metal 5e-14
2vun_A386 Enamidase; nicotinate degradation, binuclear metal 9e-04
2puz_A419 Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino 5e-14
2puz_A419 Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino 2e-10
3nqb_A608 Adenine deaminase 2; PSI-II, structural genomics, 6e-13
2gwn_A452 Dihydroorotase; zinc-binding prote structural geno 6e-12
2vr2_A541 Dihydropyrimidinase; hydantoinase, metal-binding, 6e-12
3hm7_A448 Allantoinase; metallo-dependent hydrolase, protein 1e-11
1nfg_A457 D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2 1e-11
2fty_A559 Dihydropyrimidinase; alpha/beta barrel, beta-sandw 2e-11
1gkr_A458 Hydantoinase, non-ATP dependent L-selective hydant 2e-11
3sfw_A461 Dihydropyrimidinase; hydrolase, zinc binding; HET: 2e-11
3dc8_A490 Dihydropyrimidinase; TIM-barrel, hydrolase; HET: K 2e-11
3be7_A408 Zn-dependent arginine carboxypeptidase; unknown so 4e-11
3be7_A408 Zn-dependent arginine carboxypeptidase; unknown so 2e-04
2q09_A416 Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio 4e-11
2q09_A416 Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio 7e-11
3gip_A480 N-acyl-D-glutamate deacylase; amidohydrolase famil 5e-11
3e74_A473 Allantoinase; (beta/alpha)8-barrel domain, small b 7e-11
1gkp_A458 Hydantoinase; hydrolase, dihydropyrimidinase, cycl 7e-11
2ftw_A521 Dihydropyrimidine amidohydrolase; (beta-alpha)8-ba 1e-10
2qs8_A418 XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p 1e-10
2qs8_A418 XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p 3e-05
2bb0_A421 Imidazolonepropionase; TIM barrel, hydrolase; 2.00 1e-10
2bb0_A421 Imidazolonepropionase; TIM barrel, hydrolase; 2.00 2e-09
4dyk_A451 Amidohydrolase; adenosine deaminase, nysgrc, struc 2e-10
2ogj_A417 Dihydroorotase; TIM barrel, binuclear zinc, imidaz 2e-10
4dzh_A472 Amidohydrolase; adenosine deaminase, nysgrc, struc 3e-10
1rk6_A496 D-aminoacylase; TIM barrel, beta barrel, insertion 3e-10
2r8c_A426 Putative amidohydrolase; unknown source, sargasso 4e-10
2r8c_A426 Putative amidohydrolase; unknown source, sargasso 3e-06
4f0r_A447 5-methylthioadenosine/S-adenosylhomocysteine DEAM; 4e-10
3ooq_A396 Amidohydrolase; structural genomics, protein struc 4e-10
3ooq_A396 Amidohydrolase; structural genomics, protein struc 9e-08
1onw_A390 Isoaspartyl dipeptidase; amidohydrolase, hydrolase 5e-10
2vm8_A501 Dihydropyrimidinase-related protein 2; neurogenesi 6e-10
3lnp_A468 Amidohydrolase family protein OLEI01672_1_465; TIM 6e-10
3lnp_A468 Amidohydrolase family protein OLEI01672_1_465; TIM 6e-04
3feq_A423 Putative amidohydrolase; unknown source, sargasso 8e-10
3feq_A423 Putative amidohydrolase; unknown source, sargasso 6e-06
2ics_A379 Adenine deaminase; TIM barrel, binuclear zinc, ade 1e-09
2ics_A379 Adenine deaminase; TIM barrel, binuclear zinc, ade 2e-04
3gnh_A403 L-lysine, L-arginine carboxypeptidase CC2672; N-me 2e-09
3gnh_A403 L-lysine, L-arginine carboxypeptidase CC2672; N-me 2e-05
2imr_A420 Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, 2e-09
3h4u_A479 Amidohydrolase; signature of Zn ligands, structura 2e-09
2p9b_A458 Possible prolidase; protein structure initiative I 2e-09
2p9b_A458 Possible prolidase; protein structure initiative I 7e-05
2qt3_A403 N-isopropylammelide isopropyl amidohydrolase; N-is 2e-09
2qt3_A403 N-isopropylammelide isopropyl amidohydrolase; N-is 4e-08
1p1m_A406 Hypothetical protein TM0936; putative metal depend 3e-09
2paj_A492 Putative cytosine/guanine deaminase; NYSGXRC, PSI- 3e-09
3iv8_A381 N-acetylglucosamine-6-phosphate deacetylase; IDP01 1e-08
3iv8_A381 N-acetylglucosamine-6-phosphate deacetylase; IDP01 5e-06
3mpg_A428 Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus 1e-08
2vhl_A396 N-acetylglucosamine-6-phosphate deacetylase; N- ac 2e-08
2vhl_A396 N-acetylglucosamine-6-phosphate deacetylase; N- ac 6e-07
1ejx_C567 Urease alpha subunit; alpha-beta barrel, nickel me 3e-08
4ubp_C570 Protein (urease (chain C)); bacillus pasteurii, ni 3e-08
1yrr_A382 N-acetylglucosamine-6-phosphate deacetylase; (beta 3e-08
1yrr_A382 N-acetylglucosamine-6-phosphate deacetylase; (beta 8e-07
1e9y_B569 Urease subunit beta; hydrolase, dodecamer; HET: KC 3e-08
2ood_A475 BLR3880 protein; PSI-II, PSI-2, guanine deaminase, 4e-08
2ood_A475 BLR3880 protein; PSI-II, PSI-2, guanine deaminase, 5e-07
1xrt_A467 Dihydroorotase, dhoase; amidohydrolase, metalloenz 4e-08
3gri_A424 Dihydroorotase, dhoase; hydrolase, IDP00795, metal 9e-08
2i9u_A439 Cytosine/guanine deaminase related protein; protei 3e-07
2i9u_A439 Cytosine/guanine deaminase related protein; protei 2e-06
2z00_A426 Dihydroorotase; zinc binding protein, hydrolase, m 3e-07
4aql_A476 Guanine deaminase; hydrolase, purine metabolism; H 6e-07
3ls9_A456 Triazine hydrolase; atrazine chlorohydrolase TRZN; 1e-06
1o12_A376 N-acetylglucosamine-6-phosphate deacetylase; struc 2e-06
1o12_A376 N-acetylglucosamine-6-phosphate deacetylase; struc 3e-06
1ra0_A430 Cytosine deaminase; alpha-beta barrel, hexamer, co 2e-06
1ra0_A430 Cytosine deaminase; alpha-beta barrel, hexamer, co 1e-05
3la4_A840 Urease; JACK bean, hydrolase, ME binding, nickel; 4e-06
3v7p_A427 Amidohydrolase family protein; iron binding site, 7e-06
4f0l_A458 Amidohydrolase; ssgcid, structural genomics, seatt 9e-05
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X* Length = 534 Back     alignment and structure
 Score =  470 bits (1213), Expect = e-162
 Identities = 135/569 (23%), Positives = 227/569 (39%), Gaps = 86/569 (15%)

Query: 14  ALSIFSFPLLNNFYLLKLTPATTTTTTTNLEADLVVTNGVIFTGDDSLLFADSMAIKNGR 73
           +L I +F   N+   L              +    + NG I+T    +     + I N R
Sbjct: 5   SLPISNFFTFNHQSTLFTKVKNFMGVKHIGDCMKALINGTIYTSFSPVKKVSGLVISNER 64

Query: 74  IVSVGNYSAVQQLAA-DGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDE 132
           ++  G+ S   ++A   G  +++L+GK V+P F DSH+H    G+ +  V LRGV   +E
Sbjct: 65  VLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDLRGVKSMEE 124

Query: 133 FVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLAN 192
            V RVK+      +G  I G GW+ D  G   P    +D      PV+L R   H+ + N
Sbjct: 125 LVERVKKG-----RGRIIFGFGWDQDELGR-WPTREDLDV--IDRPVFLYRRCFHVAVMN 176

Query: 193 SVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPE--VSVDERREALL 250
           S  + L+ +    +             E TG++ + A++     I E  ++V + +  + 
Sbjct: 177 SKMIDLLNLKPSKDFD-----------ESTGIVRERALEESRKIINEKILTVKDYKHYIE 225

Query: 251 RASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWS 310
            A    LS GV +V             +  +             ++K+ V  +   E   
Sbjct: 226 SAQEHLLSLGVHSVGFMS---------VGEKAL-KALFELEREGRLKMNVFAYLSPELLD 275

Query: 311 SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHE--------------------- 349
            L +L    G      + + GVK F DGSLG+ +AL  E                     
Sbjct: 276 KLEEL--NLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVE 333

Query: 350 -----------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFG 398
                      VA+HAIGD+A D+ LD ++         +   RIEHA  +      R  
Sbjct: 334 VIERAKPLGLDVAVHAIGDKAVDVALDAFEEA-------EFSGRIEHASLVRDDQLERIK 386

Query: 399 DQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPL 458
           +  +  S QP  ++ D      ++G +RA+  +Y  ++ L++   L   +D P+   +P 
Sbjct: 387 ELKVRISAQPHFIVSDWW-IVNRVGEERAKW-AYRLKT-LSSITKLGFSTDSPIEPADPW 443

Query: 459 CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVI 518
            +I  A+ R          P ER+S  +AL  +T  +A+    E D+G L  G  A+++I
Sbjct: 444 VSIDAAVNRYVVD------PGERVSREEALHLYTHGSAQVTLAE-DLGKLERGFRAEYII 496

Query: 519 LSTSSWEDFAAEVSASIEATYVSGVQAYP 547
           L     ++           T  +      
Sbjct: 497 LDRDPLKEMKG---IITITTDPNSSSVDK 522
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian} Length = 81 Back     alignment and structure
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} Length = 386 Back     alignment and structure
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} Length = 386 Back     alignment and structure
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A Length = 419 Back     alignment and structure
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A Length = 419 Back     alignment and structure
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A Length = 608 Back     alignment and structure
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis} Length = 452 Back     alignment and structure
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens} Length = 541 Back     alignment and structure
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans} Length = 448 Back     alignment and structure
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6 Length = 457 Back     alignment and structure
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A* Length = 559 Back     alignment and structure
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6 Length = 458 Back     alignment and structure
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A* Length = 461 Back     alignment and structure
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti} Length = 490 Back     alignment and structure
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A* Length = 408 Back     alignment and structure
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A* Length = 408 Back     alignment and structure
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A* Length = 416 Back     alignment and structure
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A* Length = 416 Back     alignment and structure
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A* Length = 480 Back     alignment and structure
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli} Length = 473 Back     alignment and structure
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A* Length = 458 Back     alignment and structure
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6 Length = 521 Back     alignment and structure
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18 Length = 418 Back     alignment and structure
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18 Length = 418 Back     alignment and structure
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A Length = 421 Back     alignment and structure
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A Length = 421 Back     alignment and structure
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa} Length = 451 Back     alignment and structure
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens} Length = 417 Back     alignment and structure
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV} Length = 472 Back     alignment and structure
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A Length = 496 Back     alignment and structure
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3mkv_A* Length = 426 Back     alignment and structure
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3mkv_A* Length = 426 Back     alignment and structure
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A* Length = 447 Back     alignment and structure
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima} Length = 396 Back     alignment and structure
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima} Length = 396 Back     alignment and structure
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A* Length = 390 Back     alignment and structure
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A Length = 501 Back     alignment and structure
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} Length = 468 Back     alignment and structure
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} Length = 468 Back     alignment and structure
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A* Length = 423 Back     alignment and structure
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A* Length = 423 Back     alignment and structure
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 Length = 379 Back     alignment and structure
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 Length = 379 Back     alignment and structure
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16 Length = 420 Back     alignment and structure
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17 Length = 458 Back     alignment and structure
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17 Length = 458 Back     alignment and structure
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} Length = 403 Back     alignment and structure
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} Length = 403 Back     alignment and structure
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A Length = 406 Back     alignment and structure
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9 Length = 492 Back     alignment and structure
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A* Length = 381 Back     alignment and structure
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A* Length = 381 Back     alignment and structure
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis} Length = 428 Back     alignment and structure
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis} Length = 396 Back     alignment and structure
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis} Length = 396 Back     alignment and structure
>1ejx_C Urease alpha subunit; alpha-beta barrel, nickel metalloenzyme, temperature depende structural changes, hydrolase; HET: KCX; 1.60A {Klebsiella aerogenes} SCOP: b.92.1.1 c.1.9.2 PDB: 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1ef2_A* 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1ejr_C* 1krc_C 1krb_C* 1fwi_C* 1fwa_C* 1fwb_C* 1fwc_C* 1fwd_C* 1fwe_C* 1fwg_C* 1a5k_C ... Length = 567 Back     alignment and structure
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C* Length = 570 Back     alignment and structure
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A* Length = 382 Back     alignment and structure
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A* Length = 382 Back     alignment and structure
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C* Length = 569 Back     alignment and structure
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9 Length = 475 Back     alignment and structure
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9 Length = 475 Back     alignment and structure
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A* Length = 467 Back     alignment and structure
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp} Length = 424 Back     alignment and structure
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9 Length = 439 Back     alignment and structure
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9 Length = 439 Back     alignment and structure
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus} Length = 426 Back     alignment and structure
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A Length = 476 Back     alignment and structure
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A* Length = 456 Back     alignment and structure
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10 Length = 376 Back     alignment and structure
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10 Length = 376 Back     alignment and structure
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A Length = 430 Back     alignment and structure
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A Length = 430 Back     alignment and structure
>3la4_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 2.05A {Canavalia ensiformis} Length = 840 Back     alignment and structure
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP} Length = 427 Back     alignment and structure
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus} Length = 458 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query547
3icj_A534 Uncharacterized metal-dependent hydrolase; structu 100.0
3gnh_A403 L-lysine, L-arginine carboxypeptidase CC2672; N-me 100.0
3h4u_A479 Amidohydrolase; signature of Zn ligands, structura 100.0
4dzh_A472 Amidohydrolase; adenosine deaminase, nysgrc, struc 100.0
3feq_A423 Putative amidohydrolase; unknown source, sargasso 100.0
3ls9_A456 Triazine hydrolase; atrazine chlorohydrolase TRZN; 100.0
3lnp_A468 Amidohydrolase family protein OLEI01672_1_465; TIM 100.0
4dyk_A451 Amidohydrolase; adenosine deaminase, nysgrc, struc 100.0
2r8c_A426 Putative amidohydrolase; unknown source, sargasso 100.0
4f0r_A447 5-methylthioadenosine/S-adenosylhomocysteine DEAM; 100.0
2bb0_A421 Imidazolonepropionase; TIM barrel, hydrolase; 2.00 100.0
2puz_A419 Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino 100.0
2paj_A492 Putative cytosine/guanine deaminase; NYSGXRC, PSI- 100.0
2qs8_A418 XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p 100.0
2p9b_A458 Possible prolidase; protein structure initiative I 100.0
2q09_A416 Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio 100.0
3be7_A408 Zn-dependent arginine carboxypeptidase; unknown so 100.0
4aql_A476 Guanine deaminase; hydrolase, purine metabolism; H 100.0
2ood_A475 BLR3880 protein; PSI-II, PSI-2, guanine deaminase, 100.0
2qt3_A403 N-isopropylammelide isopropyl amidohydrolase; N-is 100.0
4f0l_A458 Amidohydrolase; ssgcid, structural genomics, seatt 100.0
1ra0_A430 Cytosine deaminase; alpha-beta barrel, hexamer, co 100.0
2i9u_A439 Cytosine/guanine deaminase related protein; protei 100.0
3hpa_A479 Amidohydrolase; signature of Zn ligands, structura 100.0
3ooq_A396 Amidohydrolase; structural genomics, protein struc 100.0
3v7p_A427 Amidohydrolase family protein; iron binding site, 99.98
3mdu_A453 N-formimino-L-glutamate iminohydrolase; amonohydra 99.97
4ac7_C 570 Urease subunit alpha; hydrolase, bacillus pasteuri 99.97
4ubp_C 570 Protein (urease (chain C)); bacillus pasteurii, ni 99.97
3mtw_A403 L-arginine carboxypeptidase CC2672; hydrolase; HET 99.97
1p1m_A406 Hypothetical protein TM0936; putative metal depend 99.97
1gkr_A458 Hydantoinase, non-ATP dependent L-selective hydant 99.97
1yrr_A382 N-acetylglucosamine-6-phosphate deacetylase; (beta 99.96
3mkv_A426 Putative amidohydrolase; sargasso SEA, structural 99.96
1xrt_A467 Dihydroorotase, dhoase; amidohydrolase, metalloenz 99.96
2imr_A420 Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, 99.96
1e9y_B 569 Urease subunit beta; hydrolase, dodecamer; HET: KC 99.96
2vun_A386 Enamidase; nicotinate degradation, binuclear metal 99.96
3e74_A473 Allantoinase; (beta/alpha)8-barrel domain, small b 99.96
2gwn_A452 Dihydroorotase; zinc-binding prote structural geno 99.96
3hm7_A448 Allantoinase; metallo-dependent hydrolase, protein 99.96
3sfw_A461 Dihydropyrimidinase; hydrolase, zinc binding; HET: 99.96
2z00_A426 Dihydroorotase; zinc binding protein, hydrolase, m 99.96
1gkp_A458 Hydantoinase; hydrolase, dihydropyrimidinase, cycl 99.95
2fty_A559 Dihydropyrimidinase; alpha/beta barrel, beta-sandw 99.95
1nfg_A457 D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2 99.95
3gip_A480 N-acyl-D-glutamate deacylase; amidohydrolase famil 99.95
2vm8_A501 Dihydropyrimidinase-related protein 2; neurogenesi 99.95
3gri_A424 Dihydroorotase, dhoase; hydrolase, IDP00795, metal 99.95
3mpg_A428 Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus 99.95
2ogj_A417 Dihydroorotase; TIM barrel, binuclear zinc, imidaz 99.95
3dc8_A490 Dihydropyrimidinase; TIM-barrel, hydrolase; HET: K 99.95
2ics_A379 Adenine deaminase; TIM barrel, binuclear zinc, ade 99.94
1rk6_A496 D-aminoacylase; TIM barrel, beta barrel, insertion 99.94
4gy7_A 840 Urease; JACK bean, hydrolase, ME binding, nickel; 99.94
4ep8_C 566 Urease subunit alpha; alpha-beta barrel, nickel me 99.93
3nqb_A 608 Adenine deaminase 2; PSI-II, structural genomics, 99.93
2vhl_A396 N-acetylglucosamine-6-phosphate deacetylase; N- ac 99.93
3iv8_A381 N-acetylglucosamine-6-phosphate deacetylase; IDP01 99.93
2ftw_A521 Dihydropyrimidine amidohydrolase; (beta-alpha)8-ba 99.92
2vr2_A541 Dihydropyrimidinase; hydantoinase, metal-binding, 99.92
1onw_A390 Isoaspartyl dipeptidase; amidohydrolase, hydrolase 99.91
1o12_A376 N-acetylglucosamine-6-phosphate deacetylase; struc 99.84
3ggm_A81 Uncharacterized protein BT9727_2919; bacillus cere 99.59
3pnu_A359 Dihydroorotase; TIM barrel, zinc binding, hydrolas 99.33
2z26_A347 Dihydroorotase, dhoase; TIM barrel, hydrolase; HET 99.06
2pgf_A371 Adenosine deaminase; metallo-dependent hydrolase, 98.8
3iar_A367 Adenosine deaminase; purine metabolism structural 98.64
3rys_A343 Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2 98.63
3pao_A326 Adenosine deaminase; structural genomics, PSI-2, p 98.57
4gxw_A380 Adenosine deaminase; amidohydrolase, COG1816, EFI, 97.96
2ob3_A330 Parathion hydrolase; metalloenzyme, TIM barrel, ne 97.83
2a3l_A701 AMP deaminase, AMPD; atampd, AT2G38280, adenosine 97.83
1zzm_A259 Putative deoxyribonuclease YJJV; hydrolaze, zinc, 97.62
1bf6_A291 Phosphotriesterase homology protein; hypothetical 97.59
3rcm_A287 TATD family hydrolase; HET: CIT; 2.05A {Pseudomona 97.56
1xwy_A264 DNAse TATD, deoxyribonuclease TATD; TIM barrael, z 97.49
3ovg_A363 Amidohydrolase; structural genomics, PSI-2, protei 97.37
2vc7_A314 Aryldialkylphosphatase; phosphotriesterase, promis 97.2
3lgd_A508 Adenosine deaminase CECR1; TIM barrel, dimerizatio 96.96
3pnz_A330 Phosphotriesterase family protein; amidohydrolase 96.84
2xio_A301 Putative deoxyribonuclease tatdn1; hydrolase; 1.19 96.79
3k2g_A364 Resiniferatoxin-binding, phosphotriesterase- relat 96.68
3tn4_A360 Phosphotriesterase; lactonase, hydrolase; HET: KCX 96.64
2gzx_A265 Putative TATD related DNAse; deoxyribonuclease, NE 96.61
3gtx_A339 Organophosphorus hydrolase; mutant, amidohydrolase 96.29
3gg7_A254 Uncharacterized metalloprotein; structural genomic 96.02
1yix_A265 Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW 95.91
3rhg_A365 Putative phophotriesterase; hydrolase, amidohydrol 95.54
2y1h_A272 Putative deoxyribonuclease tatdn3; hydrolase; 2.50 94.2
1j6o_A268 TATD-related deoxyribonuclease; structural genomic 92.97
2ffi_A288 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; 89.86
4i6k_A294 Amidohydrolase family protein; enzyme function ini 89.18
3cjp_A272 Predicted amidohydrolase, dihydroorotase family; s 86.39
1v77_A212 PH1877P, hypothetical protein PH1877; RNAse P prot 83.66
3ipw_A325 Hydrolase TATD family protein; niaid, ssgcid, seat 80.88
3irs_A291 Uncharacterized protein BB4693; structural genomic 80.45
3guw_A261 Uncharacterized protein AF_1765; alpha-beta protei 80.19
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X* Back     alignment and structure
Probab=100.00  E-value=4.7e-60  Score=499.00  Aligned_cols=437  Identities=30%  Similarity=0.447  Sum_probs=377.4

Q ss_pred             cEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhh-cCCCeEEeCCCCeeecccccccccccccccccccccc
Q 008993           46 DLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLA-ADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL  124 (547)
Q Consensus        46 ~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~-~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~  124 (547)
                      +++|+|++|+++++..+..++|+|+||||++||+..+...+. ++.+++||+.|++|+|||||+|+|+..++......++
T Consensus        37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~dl  116 (534)
T 3icj_A           37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDL  116 (534)
T ss_dssp             EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSEEC
T ss_pred             CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCccCC
Confidence            489999999999877666779999999999999987654432 3567999999999999999999999999887778899


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCC
Q 008993          125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL  204 (547)
Q Consensus       125 ~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~  204 (547)
                      .+++|.+++.++++++.+.     |+.|+||+++.| ++.|++.+||++  ++|+++.+.++|..++|+++|+.+|+ .+
T Consensus       117 ~~~~s~~e~~~~l~~~~~~-----wi~g~G~~~~~~-~~~pt~~~LD~~--~~Pv~l~~~~~H~~~~Ns~AL~~~gi-~~  187 (534)
T 3icj_A          117 RGVKSMEELVERVKKGRGR-----IIFGFGWDQDEL-GRWPTREDLDVI--DRPVFLYRRCFHVAVMNSKMIDLLNL-KP  187 (534)
T ss_dssp             TTCCSHHHHHHHHHTCCSS-----SEEEEEECHHHH-SSCCCHHHHTTS--SSCEEEEETTSSEEEECHHHHHHHCC-CC
T ss_pred             CCCCCHHHHHHHHHHHHhh-----CEEEcccCHHHh-cCCCCHHHHhhC--CCeEEEEecCCcHhHHhHHHHHHcCC-CC
Confidence            9999999999999987764     999999999999 899999999999  99999999999999999999999999 66


Q ss_pred             CCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCC-C-CHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhH
Q 008993          205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPE-V-SVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED  282 (547)
Q Consensus       205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~  282 (547)
                      ++.+.         |+ +|.+.|.++..+...++. . +.++..+.++.+++.+.+.|+|++.+++..          ..
T Consensus       188 t~~p~---------G~-tG~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~----------~~  247 (534)
T 3icj_A          188 SKDFD---------ES-TGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVG----------EK  247 (534)
T ss_dssp             CTTEE---------TT-TTEEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEC----------HH
T ss_pred             CCCCC---------CC-CceeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCC----------HH
Confidence            65543         67 899999998888877776 6 889999999999999999999999998632          46


Q ss_pred             HHHHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhc-------------
Q 008993          283 FADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHE-------------  349 (547)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------------  349 (547)
                      ..+.++++.+++.+++|++.+...+..+...+...  .....++++.+++|++.||++...++.+.+             
T Consensus       248 ~~~~~~~l~~~g~l~~rv~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~  325 (534)
T 3icj_A          248 ALKALFELEREGRLKMNVFAYLSPELLDKLEELNL--GKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELV  325 (534)
T ss_dssp             HHHHHHHHHHTTCCCSEEEEEECGGGHHHHHHHTC--CSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCS
T ss_pred             HHHHHHHHHhCCCCcEEEEEecCHHHHHHHHHhcc--ccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCccc
Confidence            67899999999999999998765544433333211  224568899999999999999887765432             


Q ss_pred             -------------------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCcc
Q 008993          350 -------------------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH  410 (547)
Q Consensus       350 -------------------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~  410 (547)
                                         +.+|+.++.+++.+++++++..       .+..++|+.+++++++++|++.|+.+++||.+
T Consensus       326 ~~~e~l~~~v~~A~~~G~~v~~Ha~gd~ai~~~l~a~~~~~-------~r~~ieH~~~~~~e~i~~la~~gv~~~~~P~~  398 (534)
T 3icj_A          326 MNKDEIVEVIERAKPLGLDVAVHAIGDKAVDVALDAFEEAE-------FSGRIEHASLVRDDQLERIKELKVRISAQPHF  398 (534)
T ss_dssp             SCHHHHHHHHHHHTTTTCEEEEEECSHHHHHHHHHHHHHHT-------CCCEEEECCBCCHHHHHHHHHHTCEEEECTTH
T ss_pred             CCHHHHHHHHHHHHHCCCEEEEEEcChHHHHHHHHHHHhcc-------CCCEEEECCCCCHHHHHHHHHcCCeEEEcccc
Confidence                               9999999999999999998763       58899999999999999999999999999998


Q ss_pred             ccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHH
Q 008993          411 LLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIA  490 (547)
Q Consensus       411 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~  490 (547)
                      ...+. .+..++|+++. ...+|++.++++ +++++|||+|..+.+|+.+++.++.|      ..+..++++|+++||++
T Consensus       399 ~~~~~-~~~~~lg~~r~-~~~~p~~~l~~~-v~valGSD~p~~~~~p~~~~~~av~r------~~~~~~~~ls~~eaL~~  469 (534)
T 3icj_A          399 IVSDW-WIVNRVGEERA-KWAYRLKTLSSI-TKLGFSTDSPIEPADPWVSIDAAVNR------YVVDPGERVSREEALHL  469 (534)
T ss_dssp             HHHCT-THHHHHHHHHG-GGBTCHHHHHHH-SCEEECCTTTTSCCCHHHHHHHHHHC------CSSCGGGCCCHHHHHHH
T ss_pred             ccchh-HHHHhhCHHHH-hccHHHHHHHHh-CCEEeecCCCCCCCCHHHHHHHHHhc------cccCcccCCCHHHHHHH
Confidence            76555 56678888888 888899999999 99999999999889999999999987      22557789999999999


Q ss_pred             HHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhh
Q 008993          491 HTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAE  530 (547)
Q Consensus       491 aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~  530 (547)
                      +|.|+|+.+|++ ++|+|+|||.|||+|+|.||++++..+
T Consensus       470 ~T~~~A~~lg~e-~~GsLe~Gk~ADlvvld~dpl~~~~~~  508 (534)
T 3icj_A          470 YTHGSAQVTLAE-DLGKLERGFRAEYIILDRDPLKEMKGI  508 (534)
T ss_dssp             TTHHHHHHTTCT-TCSCCSTTSBCCEEEESSCTTC-----
T ss_pred             HHHHHHHHhCCC-CCeEECCCCCcCEEEECCChhhccccc
Confidence            999999999999 899999999999999999999865543
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV} Back     alignment and structure
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A* Back     alignment and structure
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A* Back     alignment and structure
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} Back     alignment and structure
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa} Back     alignment and structure
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A* Back     alignment and structure
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A* Back     alignment and structure
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A Back     alignment and structure
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A Back     alignment and structure
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9 Back     alignment and structure
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18 Back     alignment and structure
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17 Back     alignment and structure
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A* Back     alignment and structure
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A* Back     alignment and structure
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A Back     alignment and structure
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9 Back     alignment and structure
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} Back     alignment and structure
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus} Back     alignment and structure
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A Back     alignment and structure
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9 Back     alignment and structure
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} Back     alignment and structure
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima} Back     alignment and structure
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP} Back     alignment and structure
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A* Back     alignment and structure
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C* Back     alignment and structure
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C* Back     alignment and structure
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides} Back     alignment and structure
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A Back     alignment and structure
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6 Back     alignment and structure
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A* Back     alignment and structure
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined} Back     alignment and structure
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A* Back     alignment and structure
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16 Back     alignment and structure
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C* Back     alignment and structure
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} Back     alignment and structure
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli} Back     alignment and structure
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis} Back     alignment and structure
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans} Back     alignment and structure
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A* Back     alignment and structure
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus} Back     alignment and structure
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A* Back     alignment and structure
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A* Back     alignment and structure
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6 Back     alignment and structure
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A* Back     alignment and structure
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A Back     alignment and structure
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp} Back     alignment and structure
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis} Back     alignment and structure
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens} Back     alignment and structure
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti} Back     alignment and structure
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 Back     alignment and structure
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A Back     alignment and structure
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A* Back     alignment and structure
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ... Back     alignment and structure
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A Back     alignment and structure
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis} Back     alignment and structure
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A* Back     alignment and structure
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6 Back     alignment and structure
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens} Back     alignment and structure
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A* Back     alignment and structure
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10 Back     alignment and structure
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian} Back     alignment and structure
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp} Back     alignment and structure
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A* Back     alignment and structure
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A Back     alignment and structure
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ... Back     alignment and structure
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0 Back     alignment and structure
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A* Back     alignment and structure
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria} Back     alignment and structure
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ... Back     alignment and structure
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1 Back     alignment and structure
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12 Back     alignment and structure
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3 Back     alignment and structure
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida} Back     alignment and structure
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12 Back     alignment and structure
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A* Back     alignment and structure
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A* Back     alignment and structure
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A* Back     alignment and structure
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0 Back     alignment and structure
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens} Back     alignment and structure
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2} Back     alignment and structure
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A* Back     alignment and structure
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp} Back     alignment and structure
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A* Back     alignment and structure
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0 Back     alignment and structure
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12 Back     alignment and structure
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis} Back     alignment and structure
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens} Back     alignment and structure
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12 Back     alignment and structure
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15 Back     alignment and structure
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii} Back     alignment and structure
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A* Back     alignment and structure
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1} Back     alignment and structure
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A Back     alignment and structure
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 547
d1onwa1105 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidas 8e-10
d2bb0a1113 b.92.1.10 (A:3-73,A:374-415) Imidazolonepropionase 2e-09
d1m7ja155 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolas 2e-08
d2fvka1156 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine amid 1e-07
d1ejxc1181 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit o 1e-07
d1yrra185 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6- 1e-06
d2r8ca1102 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protei 4e-06
d1ra0a2320 c.1.9.5 (A:56-375) Cytosine deaminase catalytic do 5e-06
d2vhla191 b.92.1.5 (A:3-57,A:359-394) N-acetylglucosamine-6- 5e-05
d2i9ua1109 b.92.1.4 (A:9-66,A:377-427) Guanine deaminase {Clo 6e-05
d2p9ba1118 b.92.1.10 (A:9-70,A:395-450) Uncharacterized prote 9e-05
d2p9ba2324 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 1e-04
d1nfga1127 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkho 2e-04
d2puza1103 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionas 2e-04
d2puza1103 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionas 0.001
d1e9yb1180 b.92.1.1 (B:1-131,B:432-480) alpha-Subunit of urea 4e-04
d1ynya1127 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacill 9e-04
d1k1da1128 b.92.1.3 (A:1-52,A:385-460) D-hydantoinase {Bacill 0.003
>d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase {Escherichia coli [TaxId: 562]} Length = 105 Back     information, alignment and structure

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Isoaspartyl dipeptidase
domain: Isoaspartyl dipeptidase
species: Escherichia coli [TaxId: 562]

 Score = 54.2 bits (130), Expect = 8e-10
 Identities = 17/101 (16%), Positives = 41/101 (40%), Gaps = 11/101 (10%)

Query: 45  ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPG 104
              ++    ++  +D       + + NG+I++V +             V++L G+++ P 
Sbjct: 8   GFTLLQGAHLYAPED--RGICDVLVANGKIIAVASNIPSDI--VPNCTVVDLSGQILCPE 63

Query: 105 FIDSH---VHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVK 142
            +  +   +  +   L++ +V  RG       V+  K  VK
Sbjct: 64  ILPGNDADLLVMTPELRIEQVYARGKLM----VKDGKACVK 100
>d2bb0a1 b.92.1.10 (A:3-73,A:374-415) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]} Length = 113 Back     information, alignment and structure
>d1m7ja1 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]} Length = 55 Back     information, alignment and structure
>d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 156 Back     information, alignment and structure
>d1ejxc1 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit of urease {Klebsiella aerogenes [TaxId: 28451]} Length = 181 Back     information, alignment and structure
>d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate deacetylase, NagA {Escherichia coli [TaxId: 562]} Length = 85 Back     information, alignment and structure
>d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]} Length = 102 Back     information, alignment and structure
>d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]} Length = 320 Back     information, alignment and structure
>d2i9ua1 b.92.1.4 (A:9-66,A:377-427) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]} Length = 109 Back     information, alignment and structure
>d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} Length = 118 Back     information, alignment and structure
>d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} Length = 324 Back     information, alignment and structure
>d1nfga1 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkholderia pickettii [TaxId: 329]} Length = 127 Back     information, alignment and structure
>d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Length = 103 Back     information, alignment and structure
>d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Length = 103 Back     information, alignment and structure
>d1e9yb1 b.92.1.1 (B:1-131,B:432-480) alpha-Subunit of urease {Helicobacter pylori [TaxId: 210]} Length = 180 Back     information, alignment and structure
>d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} Length = 127 Back     information, alignment and structure
>d1k1da1 b.92.1.3 (A:1-52,A:385-460) D-hydantoinase {Bacillus stearothermophilus [TaxId: 1422]} Length = 128 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query547
d2uz9a2313 Guanine deaminase {Human (Homo sapiens) [TaxId: 96 99.78
d2i9ua2310 Guanine deaminase {Clostridium acetobutylicum [Tax 99.76
d1p1ma2281 Hypothetical protein TM0936, probable catalytic do 99.73
d2paja2336 Hypothetical protein GOS_1943094 {Environmental sa 99.67
d1ra0a2320 Cytosine deaminase catalytic domain {Escherichia c 99.65
d2bb0a2300 Imidazolonepropionase {Bacillus subtilis [TaxId: 1 99.64
d2q09a2301 Probable 4-imidazolone-5-propanoate amidohydrolase 99.62
d2imra2308 Hypothetical protein DR0824 {Deinococcus radiodura 99.58
d2p9ba1118 Uncharacterized protein BL1453 {Bifidobacterium lo 99.56
d1yrra185 N-acetylglucosamine-6-phosphate deacetylase, NagA 99.55
d2puza2301 Imidazolonepropionase {Agrobacterium tumefaciens [ 99.54
d1onwa1105 Isoaspartyl dipeptidase {Escherichia coli [TaxId: 99.5
d2ooda2325 Guanine deaminase {Bradyrhizobium japonicum [TaxId 99.47
d2p9ba2324 Uncharacterized protein BL1453 {Bifidobacterium lo 99.45
d2bb0a1113 Imidazolonepropionase {Bacillus subtilis [TaxId: 1 99.42
d2r8ca1102 Uncharacterized protein EAJ56179 {Unidentified org 99.38
d2qs8a2310 Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 99.34
d1nfga1127 D-hydantoinase {Burkholderia pickettii [TaxId: 329 99.33
d2fvka1156 Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc 99.32
d1ejxc1181 alpha-Subunit of urease {Klebsiella aerogenes [Tax 99.31
d2r8ca2311 Uncharacterized protein EAJ56179 {Unidentified org 99.3
d1ynya1127 D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} 99.29
d3be7a2303 Zn-dependent arginine carboxypeptidase {Unidentifi 99.29
d2qs8a196 Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 99.28
d1k1da1128 D-hydantoinase {Bacillus stearothermophilus [TaxId 99.2
d3be7a195 Zn-dependent arginine carboxypeptidase {Unidentifi 99.2
d1m7ja155 N-acyl-D-aminoacid amidohydrolase {Alcaligenes fae 99.2
d1gkra1126 L-hydantoinase {Arthrobacter aurescens [TaxId: 436 99.16
d1gkpa2335 D-hydantoinase {Thermus sp. [TaxId: 275]} 99.1
d1gkpa1123 D-hydantoinase {Thermus sp. [TaxId: 275]} 99.05
d2vhla191 N-acetylglucosamine-6-phosphate deacetylase, NagA 99.01
d1kcxa1142 Dihydropyrimidinase related protein-1 {Mouse (Mus 98.93
d2ftwa2334 Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli 98.93
d1ynya2332 D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} 98.92
d1kcxa2334 Dihydropyrimidinase related protein-1 {Mouse (Mus 98.92
d1nfga2330 D-hydantoinase {Burkholderia pickettii [TaxId: 329 98.89
d1gkra2325 L-hydantoinase {Arthrobacter aurescens [TaxId: 436 98.87
d2fvka2384 Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc 98.86
d2ftwa1150 Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli 98.72
d2i9ua1109 Guanine deaminase {Clostridium acetobutylicum [Tax 98.71
d1i0da_331 Phosphotriesterase (parathion hydrolase, PTE) {Pse 98.68
d2icsa2267 Putative adenine deaminase EF0837 {Enterococcus fa 98.68
d2paja1139 Hypothetical protein GOS_1943094 {Environmental sa 98.61
d1xrta2310 Two-domain dihydroorotase {Aquifex aeolicus [TaxId 98.55
d1p1ma1123 Hypothetical protein TM0936 {Thermotoga maritima [ 98.54
d1xrta1112 Two-domain dihydroorotase {Aquifex aeolicus [TaxId 98.53
d4ubpc2390 alpha-subunit of urease, catalytic domain {Bacillu 98.46
d2puza1103 Imidazolonepropionase {Agrobacterium tumefaciens [ 98.38
d1onwa2284 Isoaspartyl dipeptidase, catalytic domain {Escheri 98.36
d1e9yb1180 alpha-Subunit of urease {Helicobacter pylori [TaxI 98.28
d1m7ja3358 N-acyl-D-aminoacid amidohydrolase, catalytic domai 98.23
d1e9yb2389 alpha-subunit of urease, catalytic domain {Helicob 98.21
d1m7ja261 N-acyl-D-aminoacid amidohydrolase {Alcaligenes fae 98.2
d4ubpc1180 alpha-Subunit of urease {Bacillus pasteurii [TaxId 98.19
d2puza1103 Imidazolonepropionase {Agrobacterium tumefaciens [ 98.12
d2q09a1103 Probable 4-imidazolone-5-propanoate amidohydrolase 98.03
d1yrra2297 N-acetylglucosamine-6-phosphate deacetylase, NagA, 97.92
d1bf6a_291 Phosphotriesterase homology protein {Escherichia c 97.84
d1a4ma_349 Adenosine deaminase (ADA) {Mouse (Mus musculus) [T 97.81
d2amxa1357 Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI 97.74
d1yixa1265 Putative deoxyribonuclease YcfH {Escherichia coli 97.72
d2ooda1140 Guanine deaminase {Bradyrhizobium japonicum [TaxId 97.67
d2eg6a1343 Dihydroorotase {Escherichia coli [TaxId: 562]} 97.64
d1zzma1259 Putative deoxyribonuclease YjjV {Escherichia coli 97.34
d1xrta1112 Two-domain dihydroorotase {Aquifex aeolicus [TaxId 97.34
d1xwya1260 Deoxyribonuclease TatD (MttC) {Escherichia coli [T 97.32
d2uz9a1131 Guanine deaminase {Human (Homo sapiens) [TaxId: 96 97.17
d2q09a1103 Probable 4-imidazolone-5-propanoate amidohydrolase 97.14
d2vhla2301 N-acetylglucosamine-6-phosphate deacetylase, NagA, 96.75
d1o12a176 N-acetylglucosamine-6-phosphate deacetylase, NagA 96.71
d1o12a2288 N-acetylglucosamine-6-phosphate deacetylase, NagA, 96.6
d1kcxa1142 Dihydropyrimidinase related protein-1 {Mouse (Mus 96.55
d1j6oa_260 Hypothetical protein TM0667 {Thermotoga maritima [ 96.49
d1ejxc2385 alpha-subunit of urease, catalytic domain {Klebsie 96.37
d2ftwa1150 Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli 96.36
d1gkra1126 L-hydantoinase {Arthrobacter aurescens [TaxId: 436 95.81
d2qs8a196 Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 95.8
d1o12a176 N-acetylglucosamine-6-phosphate deacetylase, NagA 95.71
d1ra0a1103 Cytosine deaminase {Escherichia coli [TaxId: 562]} 95.64
d2icsa1101 Putative adenine deaminase EF0837 {Enterococcus fa 95.6
d2icsa1101 Putative adenine deaminase EF0837 {Enterococcus fa 94.26
d2ooda1140 Guanine deaminase {Bradyrhizobium japonicum [TaxId 92.08
d3be7a195 Zn-dependent arginine carboxypeptidase {Unidentifi 89.42
>d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Guanine deaminase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=9.5e-18  Score=163.59  Aligned_cols=124  Identities=19%  Similarity=0.176  Sum_probs=98.4

Q ss_pred             HHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993          370 VVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSD  449 (547)
Q Consensus       370 ~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD  449 (547)
                      .....+..+++..+.|+.++++++++++++.|+.+++||..+.        .++     ...+|+++|.++|+++++|||
T Consensus       189 ~~~~~g~l~~~~~~~H~~~l~~~e~~~l~~~g~~~~~~P~~~~--------~~~-----~~~~~v~~l~~~Gv~valGTD  255 (313)
T d2uz9a2         189 VYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNL--------SLS-----SGFLNVLEVLKHEVKIGLGTD  255 (313)
T ss_dssp             HHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHH--------HTT-----CCCCCHHHHHHTTCEEEECCC
T ss_pred             HHHHcCCcCCcceEEeeeecchhHHHHHhhhcccccccchhhh--------hcc-----ccccchhhhhccCceEEEeCC
Confidence            3445677788999999999999999999999999999998543        222     456789999999999999999


Q ss_pred             CCC-CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCccc
Q 008993          450 WPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGS  507 (547)
Q Consensus       450 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~Gs  507 (547)
                      +.. .+.+++.+++.+....... ........+++++|+|+|||+|+|++||+++++||
T Consensus       256 ~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~e~l~~AT~ngA~aLg~~~~iGS  313 (313)
T d2uz9a2         256 VAGGYSYSMLDAIRRAVMVSNIL-LINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGN  313 (313)
T ss_dssp             TTTSCCCCHHHHHHHHHHHHHHH-HHTTSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSS
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHH-hhcCCCCCCCCHHHHHHHHHHHHHHHhCCCCCcCc
Confidence            754 3578999998776421100 00012455799999999999999999999999997
>d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094 {Environmental samples} Back     information, alignment and structure
>d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bb0a2 c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2q09a2 c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples} Back     information, alignment and structure
>d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824 {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} Back     information, alignment and structure
>d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate deacetylase, NagA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} Back     information, alignment and structure
>d2bb0a1 b.92.1.10 (A:3-73,A:374-415) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]} Back     information, alignment and structure
>d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]} Back     information, alignment and structure
>d1nfga1 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkholderia pickettii [TaxId: 329]} Back     information, alignment and structure
>d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1ejxc1 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit of urease {Klebsiella aerogenes [TaxId: 28451]} Back     information, alignment and structure
>d2r8ca2 c.1.9.18 (A:58-368) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]} Back     information, alignment and structure
>d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} Back     information, alignment and structure
>d3be7a2 c.1.9.18 (A:57-359) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]} Back     information, alignment and structure
>d2qs8a1 b.92.1.9 (A:7-63,A:374-412) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]} Back     information, alignment and structure
>d1k1da1 b.92.1.3 (A:1-52,A:385-460) D-hydantoinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d3be7a1 b.92.1.9 (A:3-56,A:360-400) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]} Back     information, alignment and structure
>d1m7ja1 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]} Back     information, alignment and structure
>d1gkra1 b.92.1.3 (A:1-54,A:380-451) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]} Back     information, alignment and structure
>d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId: 275]} Back     information, alignment and structure
>d1gkpa1 b.92.1.3 (A:2-54,A:390-459) D-hydantoinase {Thermus sp. [TaxId: 275]} Back     information, alignment and structure
>d1kcxa1 b.92.1.3 (A:15-66,A:401-490) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} Back     information, alignment and structure
>d1kcxa2 c.1.9.6 (A:67-400) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii [TaxId: 329]} Back     information, alignment and structure
>d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]} Back     information, alignment and structure
>d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d2ftwa1 b.92.1.3 (A:7-59,A:394-490) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d2i9ua1 b.92.1.4 (A:9-66,A:377-427) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE) {Pseudomonas diminuta [TaxId: 293]} Back     information, alignment and structure
>d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2paja1 b.92.1.4 (A:10-69,A:406-484) Hypothetical protein GOS_1943094 {Environmental samples} Back     information, alignment and structure
>d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1p1ma1 b.92.1.4 (A:1-49,A:331-404) Hypothetical protein TM0936 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xrta1 b.92.1.3 (A:1-55,A:366-422) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]} Back     information, alignment and structure
>d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1onwa2 c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e9yb1 b.92.1.1 (B:1-131,B:432-480) alpha-Subunit of urease {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase, catalytic domain {Alcaligenes faecalis [TaxId: 511]} Back     information, alignment and structure
>d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1m7ja2 b.92.1.6 (A:420-480) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]} Back     information, alignment and structure
>d4ubpc1 b.92.1.1 (C:1-131,C:435-483) alpha-Subunit of urease {Bacillus pasteurii [TaxId: 1474]} Back     information, alignment and structure
>d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2q09a1 b.92.1.10 (A:4-65,A:367-407) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples} Back     information, alignment and structure
>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} Back     information, alignment and structure
>d1yixa1 c.1.9.12 (A:1-265) Putative deoxyribonuclease YcfH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ooda1 b.92.1.4 (A:3-72,A:398-467) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d2eg6a1 c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zzma1 c.1.9.12 (A:1-259) Putative deoxyribonuclease YjjV {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xrta1 b.92.1.3 (A:1-55,A:366-422) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1xwya1 c.1.9.12 (A:1-260) Deoxyribonuclease TatD (MttC) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2uz9a1 b.92.1.4 (A:8-75,A:389-451) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2q09a1 b.92.1.10 (A:4-65,A:367-407) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples} Back     information, alignment and structure
>d1o12a1 b.92.1.5 (A:1-43,A:332-364) N-acetylglucosamine-6-phosphate deacetylase, NagA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kcxa1 b.92.1.3 (A:15-66,A:401-490) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1j6oa_ c.1.9.12 (A:) Hypothetical protein TM0667 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]} Back     information, alignment and structure
>d2ftwa1 b.92.1.3 (A:7-59,A:394-490) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1gkra1 b.92.1.3 (A:1-54,A:380-451) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]} Back     information, alignment and structure
>d2qs8a1 b.92.1.9 (A:7-63,A:374-412) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]} Back     information, alignment and structure
>d1o12a1 b.92.1.5 (A:1-43,A:332-364) N-acetylglucosamine-6-phosphate deacetylase, NagA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ra0a1 b.92.1.2 (A:4-55,A:376-426) Cytosine deaminase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2icsa1 b.92.1.8 (A:4-54,A:322-371) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2icsa1 b.92.1.8 (A:4-54,A:322-371) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2ooda1 b.92.1.4 (A:3-72,A:398-467) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d3be7a1 b.92.1.9 (A:3-56,A:360-400) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]} Back     information, alignment and structure