Citrus Sinensis ID: 009005

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540------
MELGASSRVLSNNTLLRFSPESTFRRRYQVPVNPTSLNHHQRRFSNASFQLSNSYSIRETTYKKVVNMSKVDSREFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKANLLNLTPHNYVGAAAELARNVDVAVNLVNGRKVLETV
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccHHHHccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
cccccccHccccccccccccHHHcccccccccccccccccccccccccEEccccccccccccccHHHcccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHEEHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHccEccccccccHHHcccccccHHHHHHHHHHHccccEcccEEEcccHHHHHHHHHHHHHHcHEEEcccHHHHHHHHHHHccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccEEEEcc
melgassrvlsnntllrfspestfrrryqvpvnptslnhhqrrfsnasfqlsnsysireTTYKKVVNMSkvdsrefelssltalspldgrywskvkdlapymseyGLIYFRVLVEIKWLLKlskipevtevpsfsEEAKSYLQGLidgfnmddalevkniervtnHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMlsrthgqpaspttlgKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNahlsaypdvnwpqiTEDFVKSlglsfnpyvtqIETHDYMAKLFYAFVRFNnilidfdrdVWGYISLAYFKQVTkageigsstmphkvnpidfensegnlgkanedlsflsmklpisrwqrdltdstvlrnmggglgHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVmrrygvpepyeklkeltrgkvvtKESIREFIIGLELPEEAKANllnltphnyVGAAAELARNVDVAVNLVNGRKVLETV
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
MELGASSRVLSNNTLLRFSPESTFRRRYQVPVNPTSLNHHQRRFSNASFQLSNSYSIRETTYKKVVNMSKVDSREFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKANLLNLTPHNYVGAAAELARNVDVAVNLVNGRKVLETV
******************************************************YSIRETTYKKVVNMSKVDSREFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISM*************LGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEI***************************LSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKANLLNLTPHNYVGAAAELARNVDVAVNLVNGRK*****
***************LRF*********************************************************FELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVT*******STMPHKVNPIDFENSEGNLGKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKANLLNLTPHNYVGAAAELARNVDVAVNLVNGRKVLE**
MELGASSRVLSNNTLLRFSPESTFRRRYQVPVNPTSLNHHQRRFSNASFQLSNSYSIRETTYKKVVNMSKVDSREFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLS*********TTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKANLLNLTPHNYVGAAAELARNVDVAVNLVNGRKVLETV
*************TLLRFSPESTFRRRYQVPVNPTSLNHHQRRFSNASFQLSNSYSIR*T*YKK*V*M**VDSREFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKANLLNLTPHNYVGAAAELARNVDVAVNLVNGRKVLET*
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MELGASSRVLSNNTLLRFSPESTFRRRYQVPVNPTSLNHHQRRFSNASFQLSNSYSIRETTYKKVVNMSKVDSREFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKANLLNLTPHNYVGAAAELARNVDVAVNLVNGRKVLETV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query546 2.2.26 [Sep-21-2011]
P44797456 Adenylosuccinate lyase OS yes no 0.833 0.997 0.613 1e-168
P0AB89456 Adenylosuccinate lyase OS N/A no 0.820 0.982 0.618 1e-167
P0AB90456 Adenylosuccinate lyase OS yes no 0.820 0.982 0.618 1e-167
Q9I0K9456 Adenylosuccinate lyase OS yes no 0.833 0.997 0.607 1e-165
A5IGB3456 Adenylosuccinate lyase OS yes no 0.826 0.989 0.538 1e-146
Q5ZXD1456 Adenylosuccinate lyase OS yes no 0.826 0.989 0.536 1e-146
P57351456 Adenylosuccinate lyase OS yes no 0.833 0.997 0.503 1e-141
Q8K9Q7456 Adenylosuccinate lyase OS yes no 0.824 0.986 0.515 1e-137
Q89AM3460 Adenylosuccinate lyase OS yes no 0.820 0.973 0.517 1e-135
Q54J34466 Adenylosuccinate lyase OS yes no 0.816 0.957 0.485 1e-119
>sp|P44797|PUR8_HAEIN Adenylosuccinate lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=purB PE=3 SV=1 Back     alignment and function desciption
 Score =  593 bits (1528), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 279/455 (61%), Positives = 352/455 (77%)

Query: 76  FELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFS 135
            +LS+LTALSPLDGRY  KV  L    SE+GL+ FRV VE++WL KL+   ++TEVP FS
Sbjct: 1   MQLSTLTALSPLDGRYQDKVTPLRAIFSEFGLMKFRVAVEVRWLQKLASTADITEVPPFS 60

Query: 136 EEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFA 195
            +A ++L G++  FN  DA  +K IER TNHDVKAVEYFLK+K Q++ E+ KV EF HFA
Sbjct: 61  TQANAFLDGIVANFNEADAARIKEIERTTNHDVKAVEYFLKEKIQNEVELVKVSEFIHFA 120

Query: 196 CTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTL 255
           CTSEDINNL+HALML  A ++V+ P   KLI  +  +A++   I +LSRTHGQPASP+T+
Sbjct: 121 CTSEDINNLSHALMLSTARDEVILPEWQKLIDEITRLAEEYKTIPLLSRTHGQPASPSTV 180

Query: 256 GKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLS 315
           GKE++    RL R+ +++   EI+GK  GAVGNYNAHLSAYP+++W + +E+FV SLG+ 
Sbjct: 181 GKEMANVVYRLKRQFKQLQNAEILGKINGAVGNYNAHLSAYPNIDWHKFSEEFVTSLGIQ 240

Query: 316 FNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPH 375
           +NPY TQIE HDY+ + F A VRFN I+IDFDRD+WGYI+L +FKQ T AGEIGSSTMPH
Sbjct: 241 WNPYTTQIEPHDYITEFFDAVVRFNTIIIDFDRDLWGYIALNHFKQRTIAGEIGSSTMPH 300

Query: 376 KVNPIDFENSEGNLGKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSA 435
           KVNPIDFENSEGNLG AN  ++ L  KLPISRWQRDLTDSTVLRN+G GLG+ L+AY S 
Sbjct: 301 KVNPIDFENSEGNLGLANAVMTHLGQKLPISRWQRDLTDSTVLRNLGVGLGYCLIAYAST 360

Query: 436 LQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIR 495
            +GI+KL+VN+  L ++LN  WEVLAEPIQTVMRRYG+ +PYEKLKELTRGK VT++++R
Sbjct: 361 RKGISKLEVNQPHLLEELNQNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVTEQAMR 420

Query: 496 EFIIGLELPEEAKANLLNLTPHNYVGAAAELARNV 530
           EFI  L++P+E K  L  LTP  Y+GAA EL   +
Sbjct: 421 EFIDKLDIPQEEKLRLQKLTPATYIGAAVELVEKL 455

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)
EC: 4EC: .EC: 3EC: .EC: 2EC: .EC: 2
>sp|P0AB89|PUR8_ECOLI Adenylosuccinate lyase OS=Escherichia coli (strain K12) GN=purB PE=1 SV=1 Back     alignment and function description
>sp|P0AB90|PUR8_ECOL6 Adenylosuccinate lyase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=purB PE=3 SV=1 Back     alignment and function description
>sp|Q9I0K9|PUR8_PSEAE Adenylosuccinate lyase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=purB PE=3 SV=1 Back     alignment and function description
>sp|A5IGB3|PUR8_LEGPC Adenylosuccinate lyase OS=Legionella pneumophila (strain Corby) GN=purB PE=3 SV=1 Back     alignment and function description
>sp|Q5ZXD1|PUR8_LEGPH Adenylosuccinate lyase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=purB PE=1 SV=1 Back     alignment and function description
>sp|P57351|PUR8_BUCAI Adenylosuccinate lyase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=purB PE=3 SV=1 Back     alignment and function description
>sp|Q8K9Q7|PUR8_BUCAP Adenylosuccinate lyase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=purB PE=3 SV=1 Back     alignment and function description
>sp|Q89AM3|PUR8_BUCBP Adenylosuccinate lyase OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=purB PE=3 SV=1 Back     alignment and function description
>sp|Q54J34|PUR8_DICDI Adenylosuccinate lyase OS=Dictyostelium discoideum GN=purB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query546
359486726553 PREDICTED: adenylosuccinate lyase-like [ 0.981 0.969 0.776 0.0
147854045533 hypothetical protein VITISV_004401 [Viti 0.965 0.988 0.783 0.0
224112593549 predicted protein [Populus trichocarpa] 0.979 0.974 0.747 0.0
255579132473 adenylosuccinate lyase, putative [Ricinu 0.862 0.995 0.817 0.0
356501123537 PREDICTED: adenylosuccinate lyase-like [ 0.954 0.970 0.744 0.0
17978590537 adenylosuccinate-AMP lyase [Vigna unguic 0.930 0.945 0.758 0.0
356551534532 PREDICTED: adenylosuccinate lyase-like [ 0.908 0.932 0.775 0.0
357509879530 Adenylosuccinate lyase [Medicago truncat 0.950 0.979 0.731 0.0
449465025533 PREDICTED: adenylosuccinate lyase-like [ 0.963 0.986 0.714 0.0
449526201533 PREDICTED: adenylosuccinate lyase-like [ 0.963 0.986 0.714 0.0
>gi|359486726|ref|XP_002276177.2| PREDICTED: adenylosuccinate lyase-like [Vitis vinifera] gi|296086100|emb|CBI31541.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  886 bits (2289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/556 (77%), Positives = 480/556 (86%), Gaps = 20/556 (3%)

Query: 1   MELGASSRVLSNNTLLRFSPESTFRRRYQV--PVNPTSLNHHQRRFSNASFQLSNSYSIR 58
           ME GASSRVL+ N    F+P S++ +   +    NP    HH    SN SF +S + S R
Sbjct: 1   MEFGASSRVLNPNQRSLFNPISSYHKSIGLFCSYNP----HHP---SNVSFHISAANSRR 53

Query: 59  ETTYKKVVNMSKVDS-----------REFELSSLTALSPLDGRYWSKVKDLAPYMSEYGL 107
           +   K +V  + + S            +FEL+SLTALSPLDGRYWSKVKDLAPYMSEYGL
Sbjct: 54  DCICKAIVKDNSIKSEKGKRMPGEYSHDFELTSLTALSPLDGRYWSKVKDLAPYMSEYGL 113

Query: 108 IYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHD 167
           I+FRVLVEIKWLLKLS+IPEVTEVP FS+EA+SYLQGL+DGF+M DALEVKNIE+VTNHD
Sbjct: 114 IHFRVLVEIKWLLKLSQIPEVTEVPQFSKEAQSYLQGLVDGFSMSDALEVKNIEKVTNHD 173

Query: 168 VKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIK 227
           VKAVEYFLKQKCQS PEIAKVLEFFHFACTSEDINNLAHALMLKEA+N V+FPVMD+LIK
Sbjct: 174 VKAVEYFLKQKCQSHPEIAKVLEFFHFACTSEDINNLAHALMLKEAMNTVIFPVMDELIK 233

Query: 228 ALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVG 287
            +C +AKDNA+I+MLSRTHGQPASPTTLGKE+++FA+RL RERQ+ISQVEIMGKFAGAVG
Sbjct: 234 VICNMAKDNAHIAMLSRTHGQPASPTTLGKEMAIFAVRLSRERQDISQVEIMGKFAGAVG 293

Query: 288 NYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFD 347
           NYNAHL AYPD+NWPQI E+FVKSLGLSFNPYVTQIETHDYMAKLF+  ++FNNILIDFD
Sbjct: 294 NYNAHLIAYPDINWPQIAEEFVKSLGLSFNPYVTQIETHDYMAKLFHGIIQFNNILIDFD 353

Query: 348 RDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLSMKLPISR 407
           RD+W YIS+ YFKQ+TKAGEIGSSTMPHKVNPIDFENSEGNLGKAN  LS LSMKLPISR
Sbjct: 354 RDIWSYISVGYFKQITKAGEIGSSTMPHKVNPIDFENSEGNLGKANGGLSHLSMKLPISR 413

Query: 408 WQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTV 467
           WQRDLTDSTVLRNMG GLGHSLLAYKS+LQGIAKLQVNEA LS+DLN +WEVLAEPIQTV
Sbjct: 414 WQRDLTDSTVLRNMGEGLGHSLLAYKSSLQGIAKLQVNEACLSEDLNQSWEVLAEPIQTV 473

Query: 468 MRRYGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKANLLNLTPHNYVGAAAELA 527
           MRRYGVPEPYEKLKELTRG+ VT+ESIREFI GLELP+EAK NLLNLTPH YVGAA ELA
Sbjct: 474 MRRYGVPEPYEKLKELTRGRAVTRESIREFIEGLELPKEAKTNLLNLTPHTYVGAAIELA 533

Query: 528 RNVDVAVNLVNGRKVL 543
           R V+ AVNLVNG K L
Sbjct: 534 RAVERAVNLVNGFKAL 549

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147854045|emb|CAN81287.1| hypothetical protein VITISV_004401 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224112593|ref|XP_002316236.1| predicted protein [Populus trichocarpa] gi|222865276|gb|EEF02407.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255579132|ref|XP_002530414.1| adenylosuccinate lyase, putative [Ricinus communis] gi|223530063|gb|EEF31984.1| adenylosuccinate lyase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356501123|ref|XP_003519378.1| PREDICTED: adenylosuccinate lyase-like [Glycine max] Back     alignment and taxonomy information
>gi|17978590|gb|AAL48316.1| adenylosuccinate-AMP lyase [Vigna unguiculata] Back     alignment and taxonomy information
>gi|356551534|ref|XP_003544129.1| PREDICTED: adenylosuccinate lyase-like [Glycine max] Back     alignment and taxonomy information
>gi|357509879|ref|XP_003625228.1| Adenylosuccinate lyase [Medicago truncatula] gi|124360652|gb|ABN08641.1| Fumarate lyase; Adenylosuccinate lyase [Medicago truncatula] gi|355500243|gb|AES81446.1| Adenylosuccinate lyase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449465025|ref|XP_004150229.1| PREDICTED: adenylosuccinate lyase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449526201|ref|XP_004170102.1| PREDICTED: adenylosuccinate lyase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query546
TAIR|locus:2013215527 AT1G36280 [Arabidopsis thalian 0.917 0.950 0.745 3.4e-203
TAIR|locus:2124494536 AT4G18440 [Arabidopsis thalian 0.970 0.988 0.707 9.7e-199
UNIPROTKB|P0AB89456 purB [Escherichia coli K-12 (t 0.818 0.980 0.619 8.8e-150
TIGR_CMR|CPS_2902456 CPS_2902 "adenylosuccinate lya 0.818 0.980 0.617 3.8e-149
UNIPROTKB|Q9KSY0456 VC_1126 "Adenylosuccinate lyas 0.824 0.986 0.618 3.4e-148
TIGR_CMR|VC_1126456 VC_1126 "adenylosuccinate lyas 0.824 0.986 0.618 3.4e-148
TIGR_CMR|SO_2635456 SO_2635 "adenylosuccinate lyas 0.818 0.980 0.619 1.2e-147
TIGR_CMR|CBU_0824461 CBU_0824 "adenylosuccinate lya 0.831 0.984 0.535 4.6e-128
DICTYBASE|DDB_G0288333466 purB "adenylosuccinate lyase" 0.815 0.954 0.486 7.8e-110
GENEDB_PFALCIPARUM|PFB0295w471 PFB0295w "adenylosuccinate lya 0.833 0.966 0.458 5.1e-106
TAIR|locus:2013215 AT1G36280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1966 (697.1 bits), Expect = 3.4e-203, P = 3.4e-203
 Identities = 377/506 (74%), Positives = 437/506 (86%)

Query:    32 VNPT-SLNHHQRRFSNASFQLSNSYSIRETTYKKVVNMSKVDSREFELSSLTALSPLDGR 90
             +NP+ SL+H  R     SF +S+ +S++  T  K++ M+   SR+FE+S+LTALSPLDGR
Sbjct:    24 LNPSKSLSHLPR----VSFSVSSPHSLKLMTSTKLIAMASASSRDFEMSNLTALSPLDGR 79

Query:    91 YWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFN 150
             YW KVKDLA  MSE+GLIYFRVLVEIKWL+KLS IP+VTEVPSFS+EA  YLQG+IDGF+
Sbjct:    80 YWGKVKDLASSMSEFGLIYFRVLVEIKWLIKLSNIPQVTEVPSFSKEAHKYLQGIIDGFS 139

Query:   151 MDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALML 210
             MDDAL+VK IERVTNHDVKAVEYFLKQKC+S PEIAKVLEFFHFACTSEDINNL+HALML
Sbjct:   140 MDDALQVKKIERVTNHDVKAVEYFLKQKCESHPEIAKVLEFFHFACTSEDINNLSHALML 199

Query:   211 KEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRER 270
             +EA++ V+ P MD+LIK++  +AK  A + MLSRTHGQPASPTTLGKE+++FA+RL  ER
Sbjct:   200 QEALSSVILPTMDELIKSISLMAKSFAYVPMLSRTHGQPASPTTLGKEMAIFAVRLSVER 259

Query:   271 QEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQIETHDYMA 330
             + +S+ +I GKFAGAVGNYNAH+SAY +++WP + E+FV SLGL+FNPYVTQIE HDYMA
Sbjct:   260 RYLSETKIKGKFAGAVGNYNAHISAYSNIDWPHVAEEFVTSLGLTFNPYVTQIEPHDYMA 319

Query:   331 KLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLG 390
             +LF    +FNN+LIDFDRD+W YISL YFKQ+TKAGEIGSSTMPHKVNPIDFENSEGNLG
Sbjct:   320 RLFNTISQFNNVLIDFDRDIWSYISLGYFKQITKAGEIGSSTMPHKVNPIDFENSEGNLG 379

Query:   391 KANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLS 450
             KAN +L+FLSMKLPISR QRDLTDSTVLRNMGG LGHSLLAYKSA+QGI KLQVNEARL 
Sbjct:   380 KANAELAFLSMKLPISRMQRDLTDSTVLRNMGGALGHSLLAYKSAIQGIGKLQVNEARLK 439

Query:   451 DDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKAN 510
             DDL+H WEVLAEPIQTVMRRYGVPEPYEKLKELTRG+ V +ESIR+FI  LELPEEAK  
Sbjct:   440 DDLDHTWEVLAEPIQTVMRRYGVPEPYEKLKELTRGRAVNEESIRKFIKSLELPEEAKDQ 499

Query:   511 LLNLTPHNYVGAAAELARNVDVAVNL 536
             LL LTPH YVGAAA LA  VD AV+L
Sbjct:   500 LLKLTPHTYVGAAAALALAVDDAVHL 525
GO:0003824 "catalytic activity" evidence=IEA
GO:0004018 "N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity" evidence=IEA;ISS
GO:0006188 "IMP biosynthetic process" evidence=IEA
GO:0009152 "purine ribonucleotide biosynthetic process" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
TAIR|locus:2124494 AT4G18440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P0AB89 purB [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_2902 CPS_2902 "adenylosuccinate lyase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KSY0 VC_1126 "Adenylosuccinate lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_1126 VC_1126 "adenylosuccinate lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2635 SO_2635 "adenylosuccinate lyase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0824 CBU_0824 "adenylosuccinate lyase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0288333 purB "adenylosuccinate lyase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFB0295w PFB0295w "adenylosuccinate lyase, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P0AB89PUR8_ECOLI4, ., 3, ., 2, ., 20.61830.82050.9824N/Ano
P44797PUR8_HAEIN4, ., 3, ., 2, ., 20.61310.83330.9978yesno
A5IGB3PUR8_LEGPC4, ., 3, ., 2, ., 20.53880.82600.9890yesno
Q54J34PUR8_DICDI4, ., 3, ., 2, ., 20.48570.81680.9570yesno
Q89AM3PUR8_BUCBP4, ., 3, ., 2, ., 20.51770.82050.9739yesno
Q9I0K9PUR8_PSEAE4, ., 3, ., 2, ., 20.60740.83330.9978yesno
P0AB90PUR8_ECOL64, ., 3, ., 2, ., 20.61830.82050.9824yesno
P57351PUR8_BUCAI4, ., 3, ., 2, ., 20.50320.83330.9978yesno
Q5ZXD1PUR8_LEGPH4, ., 3, ., 2, ., 20.53650.82600.9890yesno
Q8K9Q7PUR8_BUCAP4, ., 3, ., 2, ., 20.51550.82410.9868yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.3.2.20.946
3rd Layer4.3.2LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query546
PLN02848458 PLN02848, PLN02848, adenylosuccinate lyase 0.0
PRK09285456 PRK09285, PRK09285, adenylosuccinate lyase; Provis 0.0
cd01598425 cd01598, PurB, PurB_like adenylosuccinases (adenyl 0.0
cd01595381 cd01595, Adenylsuccinate_lyase_like, Adenylsuccina 1e-135
TIGR00928435 TIGR00928, purB, adenylosuccinate lyase 1e-126
COG0015438 COG0015, PurB, Adenylosuccinate lyase [Nucleotide 1e-123
pfam08328115 pfam08328, ASL_C, Adenylosuccinate lyase C-termina 8e-75
cd01334325 cd01334, Lyase_I, Lyase class I family; a group of 2e-70
pfam00206312 pfam00206, Lyase_1, Lyase 7e-54
cd01594231 cd01594, Lyase_I_like, Lyase class I_like superfam 2e-33
cd01360387 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate 4e-32
cd01597437 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muco 1e-27
PRK08540449 PRK08540, PRK08540, adenylosuccinate lyase; Review 4e-27
PRK06390451 PRK06390, PRK06390, adenylosuccinate lyase; Provis 1e-16
PRK07492435 PRK07492, PRK07492, adenylosuccinate lyase; Provis 3e-16
PRK08470442 PRK08470, PRK08470, adenylosuccinate lyase; Provis 1e-14
cd03302436 cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate 1e-11
TIGR02426338 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-mucona 2e-11
PRK09053452 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cyc 2e-11
PRK07380431 PRK07380, PRK07380, adenylosuccinate lyase; Provis 2e-11
COG1027471 COG1027, AspA, Aspartate ammonia-lyase [Amino acid 3e-08
cd01357450 cd01357, Aspartase, Aspartase 1e-06
COG0165459 COG0165, ArgH, Argininosuccinate lyase [Amino acid 3e-06
cd01362455 cd01362, Fumarase_classII, Class II fumarases 4e-06
cd01596450 cd01596, Aspartase_like, aspartase (L-aspartate am 5e-06
TIGR00979458 TIGR00979, fumC_II, fumarate hydratase, class II 7e-06
cd01359435 cd01359, Argininosuccinate_lyase, Argininosuccinat 1e-05
COG0114462 COG0114, FumC, Fumarase [Energy production and con 3e-05
PRK05975351 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cyc 3e-05
PRK12273472 PRK12273, aspA, aspartate ammonia-lyase; Provision 4e-05
PRK12425464 PRK12425, PRK12425, fumarate hydratase; Provisiona 5e-05
PRK00485464 PRK00485, fumC, fumarate hydratase; Reviewed 9e-05
TIGR00838455 TIGR00838, argH, argininosuccinate lyase 1e-04
PRK08937216 PRK08937, PRK08937, adenylosuccinate lyase; Provis 1e-04
PLN00134458 PLN00134, PLN00134, fumarate hydratase; Provisiona 3e-04
PRK13353473 PRK13353, PRK13353, aspartate ammonia-lyase; Provi 7e-04
PRK00855459 PRK00855, PRK00855, argininosuccinate lyase; Provi 0.003
TIGR00839468 TIGR00839, aspA, aspartate ammonia-lyase 0.004
>gnl|CDD|178440 PLN02848, PLN02848, adenylosuccinate lyase Back     alignment and domain information 
 Score =  912 bits (2358), Expect = 0.0
 Identities = 358/458 (78%), Positives = 408/458 (89%)

Query: 73  SREFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVP 132
           SR+ ELS+LTALSPLDGRYWSKVKDL P  SE+GLI +RVLVE+KWLLKLS+IPEVTEVP
Sbjct: 1   SRDLELSNLTALSPLDGRYWSKVKDLRPIFSEFGLIRYRVLVEVKWLLKLSQIPEVTEVP 60

Query: 133 SFSEEAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFF 192
            FS+EA S+L+G+I GF++DDALEVK IERVTNHDVKAVEYFLKQKC+S PE+AKVLEFF
Sbjct: 61  PFSDEANSFLEGIIAGFSVDDALEVKKIERVTNHDVKAVEYFLKQKCKSHPELAKVLEFF 120

Query: 193 HFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASP 252
           HFACTSEDINNL+HALMLKE +N V+ P MD++IKA+  +A + A + MLSRTHGQPASP
Sbjct: 121 HFACTSEDINNLSHALMLKEGVNSVVLPTMDEIIKAISSLAHEFAYVPMLSRTHGQPASP 180

Query: 253 TTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSL 312
           TTLGKE++ FA RL R+R+++S+V+I GKFAGAVGNYNAH+SAYP+V+WP + E+FV SL
Sbjct: 181 TTLGKEMANFAYRLSRQRKQLSEVKIKGKFAGAVGNYNAHMSAYPEVDWPAVAEEFVTSL 240

Query: 313 GLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSST 372
           GL+FNPYVTQIE HDYMA+LF A  RFNNILIDFDRD+W YISL YFKQ+TKAGE+GSST
Sbjct: 241 GLTFNPYVTQIEPHDYMAELFNAVSRFNNILIDFDRDIWSYISLGYFKQITKAGEVGSST 300

Query: 373 MPHKVNPIDFENSEGNLGKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAY 432
           MPHKVNPIDFENSEGNLG AN +LS LSMKLPISR QRDLTDSTVLRNMG GLGHSLLAY
Sbjct: 301 MPHKVNPIDFENSEGNLGLANAELSHLSMKLPISRMQRDLTDSTVLRNMGVGLGHSLLAY 360

Query: 433 KSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKE 492
           KS L+GI KLQVNEARL++DL+  WEVLAEPIQTVMRRYGVPEPYEKLKELTRG+ VTKE
Sbjct: 361 KSTLRGIGKLQVNEARLAEDLDQTWEVLAEPIQTVMRRYGVPEPYEKLKELTRGRAVTKE 420

Query: 493 SIREFIIGLELPEEAKANLLNLTPHNYVGAAAELARNV 530
           S+REFI GLELPEEAK  LL LTPH Y+GAAA LA N+
Sbjct: 421 SMREFIEGLELPEEAKDQLLKLTPHTYIGAAAALALNI 458

Length = 458
>gnl|CDD|236452 PRK09285, PRK09285, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176470 cd01598, PurB, PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>gnl|CDD|176467 cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>gnl|CDD|233192 TIGR00928, purB, adenylosuccinate lyase Back     alignment and domain information
>gnl|CDD|223094 COG0015, PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|203911 pfam08328, ASL_C, Adenylosuccinate lyase C-terminal Back     alignment and domain information
>gnl|CDD|176461 cd01334, Lyase_I, Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|215787 pfam00206, Lyase_1, Lyase Back     alignment and domain information
>gnl|CDD|176466 cd01594, Lyase_I_like, Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|176464 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>gnl|CDD|176469 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>gnl|CDD|236283 PRK08540, PRK08540, adenylosuccinate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|235792 PRK06390, PRK06390, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|181000 PRK07492, PRK07492, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|181437 PRK08470, PRK08470, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176471 cd03302, Adenylsuccinate_lyase_2, Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>gnl|CDD|233863 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>gnl|CDD|181627 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|180954 PRK07380, PRK07380, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|223958 COG1027, AspA, Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|176462 cd01357, Aspartase, Aspartase Back     alignment and domain information
>gnl|CDD|223243 COG0165, ArgH, Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|176465 cd01362, Fumarase_classII, Class II fumarases Back     alignment and domain information
>gnl|CDD|176468 cd01596, Aspartase_like, aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>gnl|CDD|130052 TIGR00979, fumC_II, fumarate hydratase, class II Back     alignment and domain information
>gnl|CDD|176463 cd01359, Argininosuccinate_lyase, Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>gnl|CDD|223192 COG0114, FumC, Fumarase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|168324 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|237031 PRK12273, aspA, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|171490 PRK12425, PRK12425, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|234779 PRK00485, fumC, fumarate hydratase; Reviewed Back     alignment and domain information
>gnl|CDD|129918 TIGR00838, argH, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|236352 PRK08937, PRK08937, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|215069 PLN00134, PLN00134, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|183992 PRK13353, PRK13353, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|179143 PRK00855, PRK00855, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|213564 TIGR00839, aspA, aspartate ammonia-lyase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 546
PLN02848458 adenylosuccinate lyase 100.0
COG0015438 PurB Adenylosuccinate lyase [Nucleotide transport 100.0
PRK09285456 adenylosuccinate lyase; Provisional 100.0
cd01598425 PurB PurB_like adenylosuccinases (adenylsuccinate 100.0
PRK07492435 adenylosuccinate lyase; Provisional 100.0
PRK07380431 adenylosuccinate lyase; Provisional 100.0
PRK08470442 adenylosuccinate lyase; Provisional 100.0
PRK08540449 adenylosuccinate lyase; Reviewed 100.0
cd03302436 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL 100.0
PRK06390451 adenylosuccinate lyase; Provisional 100.0
PRK09053452 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
TIGR00928435 purB adenylosuccinate lyase. This family consists 100.0
cd01597437 pCLME prokaryotic 3-carboxy-cis,cis-muconate cyclo 100.0
cd01360387 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL 100.0
cd01595381 Adenylsuccinate_lyase_like Adenylsuccinate lyase ( 100.0
PRK06705502 argininosuccinate lyase; Provisional 100.0
COG0165459 ArgH Argininosuccinate lyase [Amino acid transport 100.0
PRK04833455 argininosuccinate lyase; Provisional 100.0
cd01359435 Argininosuccinate_lyase Argininosuccinate lyase (a 100.0
TIGR00838455 argH argininosuccinate lyase. This model describes 100.0
PLN02646474 argininosuccinate lyase 100.0
PRK12308 614 bifunctional argininosuccinate lyase/N-acetylgluta 100.0
PRK05975351 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
TIGR02426338 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisom 100.0
PRK00485464 fumC fumarate hydratase; Reviewed 100.0
PRK02186887 argininosuccinate lyase; Provisional 100.0
PRK00855459 argininosuccinate lyase; Provisional 100.0
TIGR00979458 fumC_II fumarate hydratase, class II. Putative fum 100.0
PRK12273472 aspA aspartate ammonia-lyase; Provisional 100.0
PRK13353473 aspartate ammonia-lyase; Provisional 100.0
cd01357450 Aspartase Aspartase. This subgroup contains Escher 100.0
TIGR00839468 aspA aspartate ammonia-lyase. Fumarate hydratase s 100.0
cd01362455 Fumarase_classII Class II fumarases. This subgroup 100.0
PLN00134458 fumarate hydratase; Provisional 100.0
PRK12425464 fumarate hydratase; Provisional 100.0
cd01334325 Lyase_I Lyase class I family; a group of proteins 100.0
cd01596450 Aspartase_like aspartase (L-aspartate ammonia-lyas 100.0
KOG1316464 consensus Argininosuccinate lyase [Amino acid tran 100.0
PRK06389434 argininosuccinate lyase; Provisional 100.0
PRK14515479 aspartate ammonia-lyase; Provisional 100.0
PF00206312 Lyase_1: Lyase; InterPro: IPR022761 This entry rep 100.0
KOG2700481 consensus Adenylosuccinate lyase [Nucleotide trans 100.0
COG0114462 FumC Fumarase [Energy production and conversion] 100.0
COG1027471 AspA Aspartate ammonia-lyase [Amino acid transport 100.0
KOG1317487 consensus Fumarase [Energy production and conversi 100.0
cd01594231 Lyase_I_like Lyase class I_like superfamily: conta 100.0
PRK08937216 adenylosuccinate lyase; Provisional 99.96
PF08328115 ASL_C: Adenylosuccinate lyase C-terminal; InterPro 99.85
KOG2700481 consensus Adenylosuccinate lyase [Nucleotide trans 99.78
PF1039781 ADSL_C: Adenylosuccinate lyase C-terminus; InterPr 98.69
PF1041555 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR0 95.27
PF1469870 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1 95.09
>PLN02848 adenylosuccinate lyase Back     alignment and domain information 
Probab=100.00  E-value=1.5e-91  Score=753.59  Aligned_cols=451  Identities=78%  Similarity=1.231  Sum_probs=409.0

Q ss_pred             ccccccccccCccCccCCCCccchHhhcccchhHHHHHHHHHHHHHHHhcCCCCCCC---CcccHHHHHHHHHHHhcCCc
Q 009005           75 EFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEV---PSFSEEAKSYLQGLIDGFNM  151 (546)
Q Consensus        75 ~~~~~~~~~~sp~~~ry~~~~~~m~~ifsd~~~~~~~l~vE~A~a~aLa~~~~~GiI---p~~aa~ai~~l~~~~~~~~~  151 (546)
                      +|+++++.++||+++||++++++|+.+|||++++++|++||+||+++|+   +.|+|   |+.+.++++.|.+.+..|+.
T Consensus         3 ~~~~~~~~~~~pl~~ry~~~~~e~~~ifSd~a~~~~~l~vE~ala~a~a---~~g~i~~~P~i~~~aa~~i~~~~~~~~~   79 (458)
T PLN02848          3 DLELSNLTALSPLDGRYWSKVKDLRPIFSEFGLIRYRVLVEVKWLLKLS---QIPEVTEVPPFSDEANSFLEGIIAGFSV   79 (458)
T ss_pred             CCCccccccCCCchhhhcCCcHHHHHHcCHHHHHHHHHHHHHHHHHHHH---hcCCCCCCCCCCHHHHHHHHHHHHhcCH
Confidence            4778899999999999998778999999999999999999999999999   89998   87444444444444335655


Q ss_pred             ccHHHHHHHHhhhCCchhhHHHHHHHHhhcCchhhhhcCccccCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 009005          152 DDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKV-MFPVMDKLIKALC  230 (546)
Q Consensus       152 ~d~~~i~~~~~~~~hdv~a~e~~L~e~~g~~~~~~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~-l~~~L~~l~~~L~  230 (546)
                      .|+++++++++.++|||+++|++|+++++..+++.+.++|||+|+|||||+||+++|++|+++. . +.+.|..++++|.
T Consensus        80 ~d~~~~~~~e~~t~hdv~a~~~~l~~~~~~~~~~~~~~~~vH~G~TsqDi~dTa~~L~lr~a~~-~~l~~~L~~l~~aL~  158 (458)
T PLN02848         80 DDALEVKKIERVTNHDVKAVEYFLKQKCKSHPELAKVLEFFHFACTSEDINNLSHALMLKEGVN-SVVLPTMDEIIKAIS  158 (458)
T ss_pred             hhHHHHHHHHHHhCCCcHHHHHHHHHHhccccchhhhhCcccCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence            5889999999999999999999999999742111236799999999999999999999999998 5 9999999999999


Q ss_pred             HHHHHcccccccccccccCCcccchhhHHHHHHHHHHHHHHHHHHhhhcccccccccCccccccCCCCCChhhHHHHHHH
Q 009005          231 EIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVK  310 (546)
Q Consensus       231 ~lA~~~~~t~m~gRTH~Q~A~PtTfG~~la~~~~~L~R~~~rL~~~~~~g~~gGAvGT~aa~~~~~p~~d~~~v~~~la~  310 (546)
                      ++|++|++|+|+||||+|||+|||||+|+++|+++|.|+++||.++.+.|+++|||||+++++..||++||+.+.+++++
T Consensus       159 ~lA~~~~dt~m~GRTH~Q~A~PiTfG~~~a~w~~~L~r~~~rL~~~~l~g~~~GAvGt~aa~~~~~~~~d~~~v~~~la~  238 (458)
T PLN02848        159 SLAHEFAYVPMLSRTHGQPASPTTLGKEMANFAYRLSRQRKQLSEVKIKGKFAGAVGNYNAHMSAYPEVDWPAVAEEFVT  238 (458)
T ss_pred             HHHHHhcCCeeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHHhccEeecccchhhhhhhccCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999997779999999999998767888999999999999


Q ss_pred             HcCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcceecccCCCCCCCCCCCCCCChhhHhhhhhchh
Q 009005          311 SLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLG  390 (546)
Q Consensus       311 ~LGl~~~~~~~~~~~rD~~~e~~~~la~la~~L~kia~Dl~~~~s~G~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~  390 (546)
                      .|||..++..+|+.+||+++|++++++.++++|.|||+|+|.++++|++.+...++++|||||||||||+.+|+++|+++
T Consensus       239 ~LGL~~~~~~~~v~~rD~~~e~~~~La~~a~~l~kia~Di~~~~e~ge~~e~~~~~~~GSS~MP~KrNPv~~E~i~~~a~  318 (458)
T PLN02848        239 SLGLTFNPYVTQIEPHDYMAELFNAVSRFNNILIDFDRDIWSYISLGYFKQITKAGEVGSSTMPHKVNPIDFENSEGNLG  318 (458)
T ss_pred             HhCCCCCCchhhHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcccccCCCCCCcCCCCCCcCcHHHHHHHHHHH
Confidence            99999866655789999999999999999999999999999999999998767778999999999999999999999888


Q ss_pred             hhhhHHHHHHhhcchhhhcccCCcchhHHhHHhhHHHHHHHHHHHHHhhhccccCHHHHHHHHhhhhhHHHHHHHHHHHh
Q 009005          391 KANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRR  470 (546)
Q Consensus       391 la~~~~~~~~~~l~~~~~erDl~~s~~~~~l~~~~~~~~~~l~~~~~~l~~L~Vn~erm~~nl~~~~~i~aE~~~~~l~~  470 (546)
                      +++.....+..+++.++||||+++|.++|.+++++..+..+++.+..++++|+||++||++|++.+++++||.+++.|+.
T Consensus       319 ~~~~~~~~~~~~~~~~~~eRD~~~s~~e~~~~~~~~~~~~al~~~~~~l~~L~v~~~rm~~nl~~~~~~~sE~~~~~l~~  398 (458)
T PLN02848        319 LANAELSHLSMKLPISRMQRDLTDSTVLRNMGVGLGHSLLAYKSTLRGIGKLQVNEARLAEDLDQTWEVLAEPIQTVMRR  398 (458)
T ss_pred             HHHHHHHHHHhcCcchhhccccchhhhhccHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHccchhHHHHHHHHHHH
Confidence            77766666667767767899999999999889999999999999999999999999999999999999999999999977


Q ss_pred             cCchhHHHHHHHHhhccccccccHHHHHhhCCCCHHHHHhccccCcCcccCchHHHHHH
Q 009005          471 YGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKANLLNLTPHNYVGAAAELARN  529 (546)
Q Consensus       471 ~G~~~Ah~iv~~~~~~a~~~~~~l~e~~~~~~l~~~~~~~l~~ldP~~~~G~a~~~v~~  529 (546)
                      +|+++||++|+++++....+++++++|++.+.++++..++|+.|.|.+|+|.|++++++
T Consensus       399 ~G~~~A~e~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~g~~~~~~~~  457 (458)
T PLN02848        399 YGVPEPYEKLKELTRGRAVTKESMREFIEGLELPEEAKDQLLKLTPHTYIGAAAALALN  457 (458)
T ss_pred             hChHHHHHHHHHHHHHccCCHHHHHHHHHHcCCCHHHHHHHHhCCchhhhchHHHHHhh
Confidence            99999999999999988888889999999988999998888789999999999999874

>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09285 adenylosuccinate lyase; Provisional Back     alignment and domain information
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>PRK07492 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK07380 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK08470 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK08540 adenylosuccinate lyase; Reviewed Back     alignment and domain information
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>PRK06390 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>TIGR00928 purB adenylosuccinate lyase Back     alignment and domain information
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>PRK06705 argininosuccinate lyase; Provisional Back     alignment and domain information
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK04833 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>TIGR00838 argH argininosuccinate lyase Back     alignment and domain information
>PLN02646 argininosuccinate lyase Back     alignment and domain information
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>PRK00485 fumC fumarate hydratase; Reviewed Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK00855 argininosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00979 fumC_II fumarate hydratase, class II Back     alignment and domain information
>PRK12273 aspA aspartate ammonia-lyase; Provisional Back     alignment and domain information
>PRK13353 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>cd01357 Aspartase Aspartase Back     alignment and domain information
>TIGR00839 aspA aspartate ammonia-lyase Back     alignment and domain information
>cd01362 Fumarase_classII Class II fumarases Back     alignment and domain information
>PLN00134 fumarate hydratase; Provisional Back     alignment and domain information
>PRK12425 fumarate hydratase; Provisional Back     alignment and domain information
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06389 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK14515 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F Back     alignment and domain information
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0114 FumC Fumarase [Energy production and conversion] Back     alignment and domain information
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1317 consensus Fumarase [Energy production and conversion] Back     alignment and domain information
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>PRK08937 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli) Back     alignment and domain information
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) [] Back     alignment and domain information
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle Back     alignment and domain information
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query546
3gzh_A482 Crystal Structure Of Phosphate-Bound Adenylosuccina 1e-168
2ptq_A462 Crystal Structure Of Escherichia Coli Adenylosuccin 1e-168
2ptr_A462 Crystal Structure Of Escherichia Coli Adenylosuccin 1e-167
2pts_A462 Crystal Structure Of Wild Type Escherichia Coli Ade 1e-165
3bhg_A459 Crystal Structure Of Adenylosuccinate Lyase From Le 1e-142
4efc_A472 Crystal Structure Of Adenylosuccinate Lyase From Tr 1e-120
2qga_B465 Plasmodium Vivax Adenylosuccinate Lyase Pv003765 Wi 1e-110
2hvg_A482 Crystal Structure Of Adenylosuccinate Lyase From Pl 1e-107
1c3u_A431 T. Maritima Adenylosuccinate Lyase Length = 431 3e-19
1c3c_A429 T. Maritima Adenylosuccinate Lyase Length = 429 3e-19
2x75_A431 Staphylococcus Aureus Adenylosuccinate Lyase Length 2e-18
1f1o_A431 Structural Studies Of Adenylosuccinate Lyases Lengt 1e-17
2pfm_A444 Crystal Structure Of Adenylosuccinate Lyase (Purb) 4e-17
4eei_A438 Crystal Structure Of Adenylosuccinate Lyase From Fr 2e-15
1re5_A450 Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lac 9e-12
1dof_A403 The Crystal Structure Of Adenylosuccinate Lyase Fro 3e-11
4ffx_A487 Structural And Biochemical Characterization Of Huma 3e-08
2j91_A503 Crystal Structure Of Human Adenylosuccinate Lyase I 3e-08
3c8t_A451 Crystal Structure Of Fumarate Lyase From Mesorhizob 3e-08
4flc_A487 Structural And Biochemical Characterization Of Huma 3e-08
2vd6_A503 Human Adenylosuccinate Lyase In Complex With Its Su 3e-08
1vdk_A466 Crystal Structure Of Fumarase From Thermus Thermoph 3e-07
1q5n_A454 Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate 6e-07
1yfm_A488 Recombinant Yeast Fumarase Length = 488 9e-06
1fuo_A467 Fumarase C With Bound Citrate Length = 467 4e-05
1fup_A472 Fumarase With Bound Pyromellitic Acid Length = 472 4e-05
2fus_A467 Mutations Of Fumarase That Distinguish Between The 4e-05
1kq7_A467 E315q Mutant Form Of Fumarase C From E.Coli Length 6e-05
2fel_A359 3-carboxy-cis,cis-muconate Lactonizing Enzyme From 9e-05
1yis_A478 Structural Genomics Of Caenorhabditis Elegans: Aden 3e-04
1fur_A467 Fumarase Mutant H188n With Bound Substrate L-Malate 3e-04
3tv2_A459 Structure Of A Class Ii Fumarate Hydratase From Bur 4e-04
4hgv_A495 Crystal Structure Of A Fumarate Hydratase Length = 6e-04
>pdb|3GZH|A Chain A, Crystal Structure Of Phosphate-Bound Adenylosuccinate Lyase From E. Coli Length = 482 Back     alignment and structure 
Iteration: 1

 Score =  588 bits (1515), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 277/447 (61%), Positives = 350/447 (78%)
Query: 77  ELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSE 136
           ELSSLTA+SP+DGRY  KV  L    SEYGL+ FRV VE++WL KL+    + EVP+F+ 
Sbjct: 28  ELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAA 87
Query: 137 EAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFAC 196
           +A  YL  ++  F+ +DA  +K IER TNHDVKAVEYFLK+K    PE+  V EF HFAC
Sbjct: 88  DAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKEKVAEIPELHAVSEFIHFAC 147
Query: 197 TSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLG 256
           TSEDINNL+HALMLK A ++V+ P   +LI  + ++A    +I +LSRTHGQPA+P+T+G
Sbjct: 148 TSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQYRDIPLLSRTHGQPATPSTIG 207
Query: 257 KEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSF 316
           KE++  A R+ R+ ++++QVEI+GK  GAVGNYNAH++AYP+V+W Q +E+FV SLG+ +
Sbjct: 208 KEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQW 267
Query: 317 NPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHK 376
           NPY TQIE HDY+A+LF    RFN ILIDFDRDVWGYI+L +FKQ T AGEIGSSTMPHK
Sbjct: 268 NPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPHK 327
Query: 377 VNPIDFENSEGNLGKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSAL 436
           VNPIDFENSEGNLG +N  L  L+ KLP+SRWQRDLTDSTVLRN+G G+G++L+AY+S L
Sbjct: 328 VNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTL 387
Query: 437 QGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIRE 496
           +G++KL+VN   L D+L+H WEVLAEPIQTVMRRYG+ +PYEKLKELTRGK V  E +++
Sbjct: 388 KGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAEGMKQ 447
Query: 497 FIIGLELPEEAKANLLNLTPHNYVGAA 523
           FI GL LPEE KA L  +TP NY+G A
Sbjct: 448 FIDGLALPEEEKARLKAMTPANYIGRA 474
>pdb|2PTQ|A Chain A, Crystal Structure Of Escherichia Coli Adenylosuccinate Lyase Mutant H171n With Bound Amp And Fumarate Length = 462 Back     alignment and structure
>pdb|2PTR|A Chain A, Crystal Structure Of Escherichia Coli Adenylosuccinate Lyase Mutant H171a With Bound Adenylosuccinate Substrate Length = 462 Back     alignment and structure
>pdb|2PTS|A Chain A, Crystal Structure Of Wild Type Escherichia Coli Adenylosuccinate Lyase Length = 462 Back     alignment and structure
>pdb|3BHG|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Legionella Pneumophila Length = 459 Back     alignment and structure
>pdb|4EFC|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Trypanosoma Brucei, Tb427tmp.160.5560 Length = 472 Back     alignment and structure
>pdb|2QGA|B Chain B, Plasmodium Vivax Adenylosuccinate Lyase Pv003765 With Amp Bound Length = 465 Back     alignment and structure
>pdb|2HVG|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Plasmodium Vivax Length = 482 Back     alignment and structure
>pdb|1C3U|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|1C3C|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 429 Back     alignment and structure
>pdb|2X75|A Chain A, Staphylococcus Aureus Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|1F1O|A Chain A, Structural Studies Of Adenylosuccinate Lyases Length = 431 Back     alignment and structure
>pdb|2PFM|A Chain A, Crystal Structure Of Adenylosuccinate Lyase (Purb) From Bacillus Anthracis Length = 444 Back     alignment and structure
>pdb|4EEI|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Francisella Tularensis Complexed With Amp And Succinate Length = 438 Back     alignment and structure
>pdb|1RE5|A Chain A, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From Pseudomonas Putida Length = 450 Back     alignment and structure
>pdb|1DOF|A Chain A, The Crystal Structure Of Adenylosuccinate Lyase From Pyrobaculum Aerophilum: Insights Into Thermal Stability And Human Pathology Length = 403 Back     alignment and structure
>pdb|4FFX|A Chain A, Structural And Biochemical Characterization Of Human Adenylosuccinate Lyase (Adsl) And The R303c Adsl Deficiency Associated Mutation Length = 487 Back     alignment and structure
>pdb|2J91|A Chain A, Crystal Structure Of Human Adenylosuccinate Lyase In Complex With Amp Length = 503 Back     alignment and structure
>pdb|3C8T|A Chain A, Crystal Structure Of Fumarate Lyase From Mesorhizobium Sp. Bnc1 Length = 451 Back     alignment and structure
>pdb|4FLC|A Chain A, Structural And Biochemical Characterization Of Human Adenylosuccinate Lyase (Adsl) And The R303c Adsl Deficiency Associated Mutation Length = 487 Back     alignment and structure
>pdb|2VD6|A Chain A, Human Adenylosuccinate Lyase In Complex With Its Substrate N6-(1,2-Dicarboxyethyl)-Amp, And Its Products Amp And Fumarate. Length = 503 Back     alignment and structure
>pdb|1VDK|A Chain A, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466 Back     alignment and structure
>pdb|1Q5N|A Chain A, Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate Cycloisomerase (Cmle) From Acinetobacter Calcoaceticus Sp. Adp1 Length = 454 Back     alignment and structure
>pdb|1YFM|A Chain A, Recombinant Yeast Fumarase Length = 488 Back     alignment and structure
>pdb|1FUO|A Chain A, Fumarase C With Bound Citrate Length = 467 Back     alignment and structure
>pdb|1FUP|A Chain A, Fumarase With Bound Pyromellitic Acid Length = 472 Back     alignment and structure
>pdb|2FUS|A Chain A, Mutations Of Fumarase That Distinguish Between The Active Site And A Nearby Dicarboxylic Acid Binding Site Length = 467 Back     alignment and structure
>pdb|1KQ7|A Chain A, E315q Mutant Form Of Fumarase C From E.Coli Length = 467 Back     alignment and structure
>pdb|2FEL|A Chain A, 3-carboxy-cis,cis-muconate Lactonizing Enzyme From Agrobacterium Radiobacter S2 Length = 359 Back     alignment and structure
>pdb|1YIS|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Adenylosuccinate Lyase Length = 478 Back     alignment and structure
>pdb|1FUR|A Chain A, Fumarase Mutant H188n With Bound Substrate L-Malate At Putative Activator Site Length = 467 Back     alignment and structure
>pdb|3TV2|A Chain A, Structure Of A Class Ii Fumarate Hydratase From Burkholderia Pseudomallei Length = 459 Back     alignment and structure
>pdb|4HGV|A Chain A, Crystal Structure Of A Fumarate Hydratase Length = 495 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query546
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 0.0
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 0.0
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 0.0
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 1e-40
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 5e-40
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 1e-39
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 3e-39
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 1e-37
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 1e-37
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 4e-36
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 3e-32
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 4e-32
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 2e-30
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 1e-06
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 1e-06
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 1e-06
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 1e-06
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 2e-06
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 2e-06
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 1e-05
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 2e-05
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 4e-05
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Length = 462 Back     alignment and structure
 Score =  635 bits (1638), Expect = 0.0
 Identities = 277/454 (61%), Positives = 351/454 (77%)

Query: 77  ELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSE 136
           ELSSLTA+SP+DGRY  KV  L    SEYGL+ FRV VE++WL KL+    + EVP+F+ 
Sbjct: 2   ELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAA 61

Query: 137 EAKSYLQGLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFAC 196
           +A  YL  ++  F+ +DA  +K IER TNHDVKAVEYFLK+K    PE+  V EF HFAC
Sbjct: 62  DAIGYLDAIVASFSEEDAARIKTIERTTNHDVKAVEYFLKEKVAEIPELHAVSEFIHFAC 121

Query: 197 TSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLG 256
           TSEDINNL+HALMLK A ++V+ P   +LI  L ++A    +I +LSRT GQPA+P+T+G
Sbjct: 122 TSEDINNLSHALMLKTARDEVILPYWRQLIDGLKDLAVQYRDIPLLSRTAGQPATPSTIG 181

Query: 257 KEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSF 316
           KE++  A R+ R+ ++++QVEI+GK  GAVGNYNAH++AYP+V+W Q +E+FV SLG+ +
Sbjct: 182 KEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQW 241

Query: 317 NPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHK 376
           NPY TQIE HDY+A+LF    RFN ILIDFDRDVWGYI+L +FKQ T AGEIGSSTMPHK
Sbjct: 242 NPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPHK 301

Query: 377 VNPIDFENSEGNLGKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSAL 436
           VNPIDFENSEGNLG +N  L  L+ KLP+SRWQRDLTDSTVLRN+G G+G++L+AY+S L
Sbjct: 302 VNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTL 361

Query: 437 QGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMRRYGVPEPYEKLKELTRGKVVTKESIRE 496
           +G++KL+VN   L D+L+H WEVLAEPIQTVMRRYG+ +PYEKLKELTRGK V  E +++
Sbjct: 362 KGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAEGMKQ 421

Query: 497 FIIGLELPEEAKANLLNLTPHNYVGAAAELARNV 530
           FI GL LPEE KA L  +TP NY+G A  +   +
Sbjct: 422 FIDGLALPEEEKARLKAMTPANYIGRAITMVDEL 455
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Length = 459 Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Length = 465 Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Length = 444 Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Length = 429 Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Length = 438 Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Length = 454 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Length = 451 Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Length = 403 Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Length = 450 Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Length = 478 Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Length = 359 Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Length = 503 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Length = 490 Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Length = 488 Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Length = 482 Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Length = 467 Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Length = 466 Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Length = 495 Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} PDB: 1j3u_A 3r6v_A 3r6y_A Length = 468 Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Length = 478 Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Length = 478 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query546
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 100.0
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 100.0
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 100.0
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 100.0
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 100.0
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 100.0
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 100.0
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 100.0
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 100.0
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 100.0
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 100.0
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 100.0
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 100.0
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 100.0
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 100.0
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 100.0
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 100.0
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 100.0
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 100.0
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 100.0
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 100.0
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 100.0
4hgv_A495 Fumarase C, fumarate hydratase class II; nysgrc, P 100.0
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 100.0
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 100.0
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 100.0
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Back     alignment and structure
Probab=100.00  E-value=1e-93  Score=774.18  Aligned_cols=453  Identities=53%  Similarity=0.892  Sum_probs=403.0

Q ss_pred             cccccccccccCccCccCCCCccchHhhcccchhHHHHHHHHHHHHHHHhcCCCC-CC--CCcccHHHHHHHHHHHhcCC
Q 009005           74 REFELSSLTALSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEV-TE--VPSFSEEAKSYLQGLIDGFN  150 (546)
Q Consensus        74 ~~~~~~~~~~~sp~~~ry~~~~~~m~~ifsd~~~~~~~l~vE~A~a~aLa~~~~~-Gi--Ip~~aa~ai~~l~~~~~~~~  150 (546)
                      .+|+++.||++|||++||.+++++|+.+|||++++++|+.+|+||++||+   +. |+  ||+.+++++++|.+.+.+|.
T Consensus         2 ~~~~~~~~~~~s~~~gRy~~~~~~~~~~fsd~~~~~~~l~ve~a~~~ala---~~~gi~~ip~i~~~~~~~i~~~~~~~~   78 (459)
T 3bhg_A            2 NAMTLTALNAISPIDGRYVNKTRALSPYFSEFALTYYRLMVEIKWFESLA---ANDTIPEVPALDNKARKFLSDLISNFN   78 (459)
T ss_dssp             ----CCGGGCSSTTTTTTHHHHGGGTTTSSHHHHHHHHHHHHHHHHHHHH---TCTTCTTSCCCCHHHHHHHHHHHHTCC
T ss_pred             CCCCcccccccCcccccccCChHHHHHHcCHHHHHHHHHHHHHHHHHHHH---hccCCCCCCCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999998778999999999999999999999999999   77 66  55445666666666666776


Q ss_pred             cccHHHHHHHHhhhCCchhhHHHHHHHHhhcCchhhhhcCccccCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 009005          151 MDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAIN-KVMFPVMDKLIKAL  229 (546)
Q Consensus       151 ~~d~~~i~~~~~~~~hdv~a~e~~L~e~~g~~~~~~~~~~~vH~G~TsnDi~dTa~~L~lr~al~-~~l~~~L~~l~~~L  229 (546)
                      ..|+++++++++.++|||+++|++|++++|+.++++++++|||+|+|||||++|+++|++|+++. . |.+.|.+|+++|
T Consensus        79 ~~d~~~~~~~e~~~~~Dv~a~e~~l~e~~g~~~~~~~~~~~iH~g~SsnDv~~Ta~~L~lr~~l~~~-l~~~L~~l~~~L  157 (459)
T 3bhg_A           79 ESEAEKIKEFEKQTNHDVKAVEYYLQDKFQENEQLKSCVAFIHFACTSEDINNLAYALMIKQAIAQV-IQPTIAEIMGSI  157 (459)
T ss_dssp             HHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTSTTGGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHhcCCChHHHHHHHHHHhcccccCchhhhhhcCCCCHHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            55788899999999999999999999999854333468999999999999999999999999998 5 999999999999


Q ss_pred             HHHHHHcccccccccccccCCcccchhhHHHHHHHHHHHHHHHHHHhhhcccccccccCccccccCCCCCChhhHHHHHH
Q 009005          230 CEIAKDNANISMLSRTHGQPASPTTLGKEISVFAIRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFV  309 (546)
Q Consensus       230 ~~lA~~~~~t~m~gRTH~Q~A~PtTfG~~la~~~~~L~R~~~rL~~~~~~g~~gGAvGT~aa~~~~~p~~d~~~v~~~la  309 (546)
                      .++|++|++|+|+||||+||||||||||||++|+++|.|+++||.++.++|+++|||||+|++...||++||+.++++++
T Consensus       158 ~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~GAvGT~~a~~~~~~~~~~~~~~~~~~  237 (459)
T 3bhg_A          158 TLLGKQHADVAMLSRTHGQPATPTTMGKELVNFVARLKRPQQQLAEVLIPAKFNGAVGNYNAHVAAYPEVDWRKHCANFV  237 (459)
T ss_dssp             HHHHHHTTTCEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEECCCCSSSSCHHHHHHCTTSCHHHHHHHHH
T ss_pred             HHHHHHccCCEeeccccCccceechHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCcccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888889999999998877789999999999999


Q ss_pred             HHcCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcceecccCCCCCCCCCCCCCCChhhHhhhhhch
Q 009005          310 KSLGLSFNPYVTQIETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNL  389 (546)
Q Consensus       310 ~~LGl~~~~~~~~~~~rD~~~e~~~~la~la~~L~kia~Dl~~~~s~G~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~  389 (546)
                      +.|||..|++++|+.+||+++|++++++.++++|+|||+|+|+|++.|++++.++++++|||||||||||+.+|+++|++
T Consensus       238 ~~LGl~~~~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~~~~~e~~~~~~~GSSiMP~K~NP~~~e~~~g~~  317 (459)
T 3bhg_A          238 TSLGLSFNAYTTQIEPHDGIAEVSQIMVRINNILLDYTQDIWSYISLGYFKQKTIAEEVGSSTMPHKVNPIDFENAEGNL  317 (459)
T ss_dssp             HHTTCEECSSCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEECC------CCSSCCCCCTHHHHHHHHHH
T ss_pred             HHhCCCCCccccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceehccCCCCCCCCCCCCCcChHHHHHHHHHH
Confidence            99999999999899999999999999999999999999999999988888888999999999999999999999999999


Q ss_pred             hhhhhHHHHHHhhcchhhhcccCCcchhHHhHHhhHHHHHHHHHHHHHhhhccccCHHHHHHHHhhhhhHHHHHHHHHHH
Q 009005          390 GKANEDLSFLSMKLPISRWQRDLTDSTVLRNMGGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWEVLAEPIQTVMR  469 (546)
Q Consensus       390 ~la~~~~~~~~~~l~~~~~erDl~~s~~~~~l~~~~~~~~~~l~~~~~~l~~L~Vn~erm~~nl~~~~~i~aE~~~~~l~  469 (546)
                      ++++...+.+..+++.++||||+++|..+|.++..+..+..+++.+..++++|+||++||++|++.+++++||.++++|.
T Consensus       318 ~l~~~~~~~~~~~l~~~~~~rdl~~s~~~r~l~~~~~~~~~~l~~~~~~l~gl~vn~e~m~~~l~~~~~~~te~~~~~L~  397 (459)
T 3bhg_A          318 GLSNALFIHFANKLTQSRMQRDLSDSTVLRNLGVAFSYSLIAYHSVAKGNDKLQINKSALQKDLSENWEVLAEAIQTVMR  397 (459)
T ss_dssp             HHHHHHHHHHHHHTTCCSTTCCTHHHHHHTTHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTCGGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccchhhhhhhhHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHcCCchHHHHHHHHHH
Confidence            98888887777788766799999999988888889999999999999999999999999999999999989999999996


Q ss_pred             hcCchhHHHHHHHHhhccccccccHHHHHhhCCCCHHHHHhccccCcCcccCchHHHHHHH
Q 009005          470 RYGVPEPYEKLKELTRGKVVTKESIREFIIGLELPEEAKANLLNLTPHNYVGAAAELARNV  530 (546)
Q Consensus       470 ~~G~~~Ah~iv~~~~~~a~~~~~~l~e~~~~~~l~~~~~~~l~~ldP~~~~G~a~~~v~~~  530 (546)
                      ++|+++||++|+++++++..++.++++++..+.++++..++|+.|||.+|+|.++++++++
T Consensus       398 ~~G~~~A~~iv~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~l~~~dp~~y~g~a~~~~~~~  458 (459)
T 3bhg_A          398 RYNEPNAYEQLKELTRGQMIDAENLKKFIKTLSIPEEAKAELMKLTPETYTGLATQLVKAF  458 (459)
T ss_dssp             HTTCTTHHHHHHHHHTTSCCCHHHHHHHHHTSCSCHHHHHHHHHCCGGGCCTTHHHHHHHC
T ss_pred             HhChHHHHHHHHHHHhhcccccccHHHHHHhcCCCchhHHHHHhCCHHHHhCcHHHHHHhc
Confidence            6699999999999999655666789999988777665545555699999999999999874
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Back     alignment and structure
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Back     alignment and structure
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti} Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 546
d1dofa_402 a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Py 3e-51
d1c3ca_429 a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga 2e-50
d1re5a_448 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 5e-42
d1q5na_444 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 1e-33
d1yfma_459 a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomy 7e-30
d1vdka_460 a.127.1.1 (A:) Fumarase {Thermus thermophilus [Tax 2e-26
d1jswa_459 a.127.1.1 (A:) L-aspartate ammonia lyase {Escheric 3e-17
d1fuoa_456 a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 3e-13
d1j3ua_462 a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus 1e-10
d1tj7a_455 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 3e-10
d1k62b_459 a.127.1.1 (B:) Argininosuccinate lyase/delta-cryst 1e-08
d1tjva_449 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 1e-08
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 402 Back     information, alignment and structure

class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Adenylosuccinate lyase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

 Score =  178 bits (451), Expect = 3e-51
 Identities = 87/420 (20%), Positives = 160/420 (38%), Gaps = 32/420 (7%)

Query: 84  LSPLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQ 143
           +SP D RY S+  ++    +   +I   + VE   +  L ++             +   +
Sbjct: 2   VSPFDWRYGSE--EIRRLFTNEAIINAYLEVERALVCALEELGVAER-----GCCEKVNK 54

Query: 144 GLIDGFNMDDALEVKNIERVTNHDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINN 203
             +       A EV  +ER T HD+ ++   L+QK            + H+  TS DI +
Sbjct: 55  ASVS------ADEVYRLERETGHDILSLVLLLEQKSGC--------RYVHYGATSNDIID 100

Query: 204 LAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRTHGQPASPTTLGKEISVFA 263
            A AL+        +      +   L  +A+    + M+ RTHGQ A P TLG + + + 
Sbjct: 101 TAWALL-IRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYY 159

Query: 264 IRLGRERQEISQVEIMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQI 323
             L    ++++  E   +    +G     ++++ ++          + LGL  +   TQ+
Sbjct: 160 YELYIACRQLALAEEFIR--AKIGGAVGTMASWGELGLEVRRR-VAERLGLPHHVITTQV 216

Query: 324 ETHDYMAKLFYAFVRFNNILIDFDRDVWGYISLAYFKQVTKAGEIGSSTMPHKVNPIDFE 383
              +  A L  A      +      ++               G  GSS MPHK NP   E
Sbjct: 217 APRESFAVLASALALMAAVFERLAVEIRELSR--PEIGEVVEGGGGSSAMPHKANPTASE 274

Query: 384 NSEGNLGKANEDLSFLSMKLPISRWQRDLT-DSTVLRNMGGGLGHSLLAYKSALQGIAKL 442
                        + ++ +      +RDLT  +     +   L        SAL+ +  +
Sbjct: 275 RIVSLARYVRAL-THVAFENVALWHERDLTNSANERVWIPEALLALDEILTSALRVLKNV 333

Query: 443 QVNEARLSDDLNHAWE-VLAEPIQTVMRRYGVP--EPYEKLKELTRGKVVTKESIREFII 499
            ++E R++++L  A   +L E     M + G    E Y+K KE+       ++   E +I
Sbjct: 334 YIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLI 393
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Length = 429 Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Length = 448 Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Length = 444 Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 459 Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Length = 460 Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Length = 459 Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Length = 456 Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Length = 462 Back     information, alignment and structure
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Length = 455 Back     information, alignment and structure
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Length = 459 Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Length = 449 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query546
d1re5a_448 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1c3ca_429 Adenylosuccinate lyase {Thermotoga maritima [TaxId 100.0
d1q5na_444 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1f1oa_408 Adenylosuccinate lyase {Bacillus subtilis [TaxId: 100.0
d1dofa_402 Adenylosuccinate lyase {Archaeon Pyrobaculum aerop 100.0
d1tj7a_455 Argininosuccinate lyase/delta-crystallin {Escheric 100.0
d1k62b_459 Argininosuccinate lyase/delta-crystallin {Human (H 100.0
d1tjva_449 Argininosuccinate lyase/delta-crystallin {Domestic 100.0
d1vdka_460 Fumarase {Thermus thermophilus [TaxId: 274]} 100.0
d1j3ua_462 L-aspartate ammonia lyase {Bacillus sp., ym55-1 [T 100.0
d1yfma_459 Fumarase {Baker's yeast (Saccharomyces cerevisiae) 100.0
d1jswa_459 L-aspartate ammonia lyase {Escherichia coli [TaxId 100.0
d1fuoa_456 Fumarase {Escherichia coli [TaxId: 562]} 100.0
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Back     information, alignment and structure
class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)
species: Pseudomonas putida, strain KT2440 [TaxId: 303]

Probab=100.00  E-value=6.4e-81  Score=671.08  Aligned_cols=429  Identities=21%  Similarity=0.214  Sum_probs=363.0

Q ss_pred             ccCccCCCCccchHhhcccchhHHHHHHHHHHHHHHHhcCCCCCCCCcccHHHHHHHHHHHhcCCcccHHHHHHHHhhhC
Q 009005           86 PLDGRYWSKVKDLAPYMSEYGLIYFRVLVEIKWLLKLSKIPEVTEVPSFSEEAKSYLQGLIDGFNMDDALEVKNIERVTN  165 (546)
Q Consensus        86 p~~~ry~~~~~~m~~ifsd~~~~~~~l~vE~A~a~aLa~~~~~GiIp~~aa~ai~~l~~~~~~~~~~d~~~i~~~~~~~~  165 (546)
                      .|++||+  +++|+++|||++++++|++||.||+++++   ++|+||++++++|.+.+   ... ..|.+.+.+.+..++
T Consensus         3 l~~~~y~--~~~~~~ifsd~~~~~~~l~ve~A~a~a~~---e~G~ip~~~~~~I~~~~---~~~-~~d~~~~~~~~~~~~   73 (448)
T d1re5a_           3 LFDAYFT--APAMREIFSDRGRLQGMLDFEAALARAEA---SAGLVPHSAVAAIEAAC---QAE-RYDTGALANAIATAG   73 (448)
T ss_dssp             TTHHHHS--CHHHHHHTSHHHHHHHHHHHHHHHHHHHH---TTTSSCHHHHHHHHHHC---CGG-GSCHHHHHHHHHHHS
T ss_pred             ccccccC--cHHHHHHhChHHHHHHHHHHHHHHHHHHH---HcCCCCHHHHHHHHHhc---ccc-CcCHHHHHHHHhHhc
Confidence            4888998  57999999999999999999999999999   99999987777775432   221 236788889999999


Q ss_pred             CchhhHHHHHHHHhhcCchhhhhcCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Q 009005          166 HDVKAVEYFLKQKCQSQPEIAKVLEFFHFACTSEDINNLAHALMLKEAINKVMFPVMDKLIKALCEIAKDNANISMLSRT  245 (546)
Q Consensus       166 hdv~a~e~~L~e~~g~~~~~~~~~~~vH~G~TsnDi~dTa~~L~lr~al~~~l~~~L~~l~~~L~~lA~~~~~t~m~gRT  245 (546)
                      ||+++++.++.+.++..  .++.++|||+|+|||||++|+++|++|+++.. +.+.|..|+++|.++|++|++|+|||||
T Consensus        74 ~~~~~~v~~~~~~~~~~--~g~~~~~vH~G~TsnDi~~Ta~~L~lr~~~~~-l~~~l~~l~~~L~~~a~~~~~~~m~grT  150 (448)
T d1re5a_          74 NSAIPLVKALGKVIATG--VPEAERYVHLGATSQDAMDTGLVLQLRDALDL-IEADLGKLADTLSQQALKHADTPLVGRT  150 (448)
T ss_dssp             SSHHHHHHHHHHHHHHH--CGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCcHHHHHHHHHHHhhc--CcchHhHccCCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhhHHH
Confidence            99999999988887641  12578999999999999999999999999995 9999999999999999999999999999


Q ss_pred             cccCCcccchhhHHHHHHHHHHHHHHHHHHhh---hcccccccccCccccccCCCCCChhhHHHHHHHHcCCCCCCCCcc
Q 009005          246 HGQPASPTTLGKEISVFAIRLGRERQEISQVE---IMGKFAGAVGNYNAHLSAYPDVNWPQITEDFVKSLGLSFNPYVTQ  322 (546)
Q Consensus       246 H~Q~A~PtTfG~~la~~~~~L~R~~~rL~~~~---~~g~~gGAvGT~aa~~~~~p~~d~~~v~~~la~~LGl~~~~~~~~  322 (546)
                      |+||||||||||||++|+++|.|+++||.++.   ..+++||++|++++++.     ++..+++.+++.|||..|+.+ +
T Consensus       151 H~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~~~~~~~-----~~~~~~~~l~~~lgl~~~~~~-~  224 (448)
T d1re5a_         151 WLQHATPVTLGMKLAGVLGALTRHRQRLQELRPRLLVLQFGGASGSLAALGS-----KAMPVAEALAEQLKLTLPEQP-W  224 (448)
T ss_dssp             TTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHSBCCCCCTTSSCGGGGG-----GHHHHHHHHHHHHTCBCCSSC-C
T ss_pred             HHHHHhhhHHHHHHHHHHhhhhhHHHHHHHHHHhhhhcccCcCccchhcccc-----hhHHHHHHHHHHhCCCCCCCc-c
Confidence            99999999999999999999999999999985   67888999999877643     344578889999999887665 5


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcceecccCCCCCCCCCCCCCCChhhHhhhhhchhhhhhHHHHHH
Q 009005          323 IETHDYMAKLFYAFVRFNNILIDFDRDVWGYIS--LAYFKQVTKAGEIGSSTMPHKVNPIDFENSEGNLGKANEDLSFLS  400 (546)
Q Consensus       323 ~~~rD~~~e~~~~la~la~~L~kia~Dl~~~~s--~G~~~~~~~~~~~GSS~MPhKrNPv~~E~~~g~~~la~~~~~~~~  400 (546)
                      +.+||++++++++++.++++|+|||+|+++|++  +|++.++.+.+++|||||||||||+.+|+++++++.+......+.
T Consensus       225 ~~~rd~~~e~~~~l~~~~~~l~kia~di~~l~~~~~~~~~e~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~  304 (448)
T d1re5a_         225 HTQRDRLVEFASVLGLVAGSLGKFGRDISLLMQTEAGEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAATRVPGLLSTLF  304 (448)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHhhhHHHHHHHHHHHHHhhHHHHHHHHHHhhhhhhhhhhccccccCCccchhhhccCcchHHHHHHHHHHHHHHHHHHh
Confidence            668999999999999999999999999999874  888887777889999999999999999999997775544444444


Q ss_pred             hhcchhhhcccCCcchhHHhH-HhhHHHHHHHHHHHHHhhhccccCHHHHHHHHhhhhh-HHHHHHHHHH-HhcCchhHH
Q 009005          401 MKLPISRWQRDLTDSTVLRNM-GGGLGHSLLAYKSALQGIAKLQVNEARLSDDLNHAWE-VLAEPIQTVM-RRYGVPEPY  477 (546)
Q Consensus       401 ~~l~~~~~erDl~~s~~~~~l-~~~~~~~~~~l~~~~~~l~~L~Vn~erm~~nl~~~~~-i~aE~~~~~l-~~~G~~~Ah  477 (546)
                      ..++. .++||++++...|.. ..++..+..++..+..++++|+||++||++|++.+++ ++||.++++| +.+|+++||
T Consensus       305 ~~~~~-~~erd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~vn~~~m~~~l~~s~~~~~ae~~~~~L~~~ig~~~Ah  383 (448)
T d1re5a_         305 AAMPQ-EHERSLGLWHAEWETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVLAQRLGRDRAH  383 (448)
T ss_dssp             HTCCC-CTTBCSSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHTTSTTGGGHHHHHHHHHHHSCHHHHH
T ss_pred             hhcch-hhHhhhhhhhhhhhhhhhhhHHHHHHHHhhhcccccCcccHHHHHHHHHhccCHHHHHHHHHHHhhcCCHHHHH
Confidence            55554 489999999877753 4566677778888899999999999999999998876 6899999998 789999999


Q ss_pred             HHHHHHhhccccccccHHHHHhhC-----CCCHHHHHhccccCcCcccCchHHHHHHHHHHhh
Q 009005          478 EKLKELTRGKVVTKESIREFIIGL-----ELPEEAKANLLNLTPHNYVGAAAELARNVDVAVN  535 (546)
Q Consensus       478 ~iv~~~~~~a~~~~~~l~e~~~~~-----~l~~~~~~~l~~ldP~~~~G~a~~~v~~~~~~~~  535 (546)
                      ++|+++++.+..++.++++++.+.     .+++++++.+  |||++|+|.|+++|++++++++
T Consensus       384 ~iv~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~~~l~~~--ldP~~~iG~a~~~v~r~l~~~~  444 (448)
T d1re5a_         384 HLLEQCCQRAVAEQRHLRAVLGDEPQVSAELSGEELDRL--LDPAHYLGQARVWVARAVSEHQ  444 (448)
T ss_dssp             HHHHHHHHHHHHTTCCHHHHHHTCHHHHHHSCHHHHHHH--TCGGGCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHhhHhhhCCCCHHHHHHh--CCHHHhCCcHHHHHHHHHHHHH
Confidence            999999998888899999988643     4888888875  9999999999999999998874
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure