Citrus Sinensis ID: 009080

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540----
Protein Sequence
MGKRGGTSWLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDDEKKREKRRWLFRKTTNQETVAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHAIAMEMATAAAAEAAAASAHAAAEVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDRPKLLDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRINHQNQYHQHQQQHGQYQRPASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRTYNTSQTPSLRSNYYYTGNVHQQSRGGASSSGTLPNYMAATESAKAKARSQSAPRQRPSTPERDRVGSAKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHFGLEQQSNYSSCYTDSIGGEISPSSTSDLRRWLR
Secondary Structure (PSIPRED)
cccccccccHHHHHHHcccccccHHHHHHHHHcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHcccccccccccHHHcccccccccccHHHccccccccccccccccccccccccccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHc
Coil and Loop (DISEMBL)
mgkrggtsWLTAVKRAfrsptkesekksSRQRreehdqedddEKKREKRRWLFRKTTNQETVAQQQTstkerssahhvtgstsQADRAAEEHKHAIAMEMATAAAAEAAAASAHAAAEVARlirpptfnaREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKlsqdgsrkstfsdtnttvWESRYLqdisdrrsmsregssiaddwderphTIEEVKVMLQQRKEAALKRERTLSHAFSQQMwrngrsssmgdadeledrpKLLDRWmatkpweskgrastdnrdhiktveidtsqpysylapnlrrinhqnqyHQHQqqhgqyqrpaspshrahqnpslhhspvtpspsktrpiqvrsasprcprddrtyntsqtpslrsnyyytgnvhqqsrggasssgtlpnyMAATESAKAkarsqsaprqrpstperdrvgsakkrlsfpvpepygvamgygnhgqnlrspsfksvagshfgleqqsnysscytdsiggeispsstSDLRRWLR
Flexible Loop (DISEMBL)
mgkrggtswltavkrafrsptkesekkssrqrreehdqedddekkrekrrwlfrkttnqetvaqqqtstkerssahhvtgstsqadRAAEEHKHAIAMEMATAAAAEAAAASAHAAAEVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVklqalvrghnvrkqaKMTLRCMQALVRVQARVLDQrvklsqdgsrkstfsdtnttvwesrylqdisdrrsmsregssiaddwderpHTIEEVKVMLQQRKEAALKRERTLshafsqqmwrngrsssmgdadELEDRPKLLDRWmatkpweskgrastdnrdhiktveidtsqpysYLAPNLRRINHQNQYHQHQQQHGQYQRPASPSHRAHQNPSlhhspvtpspsktrpiqvrsasprcprddrtyntsqtpslrsNYYYTGNVHQQSRGGASSSGTLPNYMAATESAkakarsqsaprqrpstperdrvgsakkrlsfpvpEPYGVAMGYGNHGQNLRSPSFKSVAGSHFGLEQQSNYSSCYtdsiggeispsstsdlrrwlr
Low Complexity Region (SEG)
MGKRGGTSWLTAVKRAFRSPTKESEKKSSrqrreehdqedddekkrekrrWLFRKTTNQETVAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHaiamemataaaaeaaaasahaaaevaRLIRPPTFNAREIYAAIVIQTAFRGYlarralralKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDRPKLLDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRInhqnqyhqhqqqhgqyqRPASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRTYNTSQTPSLRSNYYYTGNVHQQSRGGASSSGTLPNYMAATESAKAKARSQSAPRQRPSTPERDRVGSAKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHFGLEQQSNYSSCYTDSIGGEISPSSTSDLRRWLR
Disordered region (IsUnstruct)
*****************************************************************************************************************HAAAEVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRV******************VW**********************************************************************************************************************YL****************************************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
*G*RGGTSWLTAVK************************************************************************************************************************AAIVIQTAFRGYLARRALRALKGLV***************KMTLRCMQA*******************************************************DDWDE*******************************************************LDRWMATKPWE**********************************************************************************************************************************************************************************************************************************TSDLRRWLR
Disordered Region (DISEMBL)
MGKRGGTSWLTAVKRA******************************EKRRWLFRKT***********************************HKHAIAMEMAT***************EVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRV***************NTTVWESRYLQDISD************DDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDRPKLLDRWMATKPW*********NRDHIKTVEIDTSQPYSYLAPNLRRINHQN*************************************************************SQTPSLRSNYYYTGNV**********SGTLPNYMAA*****************************KKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHFGLEQQSNYSSCYTDSIGGE**************
Disordered Region (DISPRO)
******************************************************************************************************************************TFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSD**TTVWESRYLQDISDRRSMSREGS**ADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNG***********EDRPKLLDRWMATKPW*****************************************************************************************************************************************************************************************************************************************WLR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKRGGTSWLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDDEKKREKRRWLFRKTTNQETVAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHAIAMEMATAAAAEAAAASAHAAAEVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDRPKLLDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRINHQNQYHQHQQQHGQYQRPASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRTYNTSQTPSLRSNYYYTGNVHQQSRGGASSSGTLPNYMAATESAKAKARSQSAPRQRPSTPERDRVGSAKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHFGLEQQSNYSSCYTDSIGGEISPSSTSDLRRWLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	544	2.2.26 [Sep-21-2011]
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.242	0.197	0.344	7e-20
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.347	0.416	0.313	1e-19
Q9FXI5	794	Protein IQ-DOMAIN 32 OS=A	no	no	0.215	0.147	0.378	1e-13
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.130	0.120	0.541	4e-13

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score = 99.4 bits (246), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 95/151 (62%), Gaps = 19/151 (12%)

Query: 135 AAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQ 194
           +A  IQ AFRGY+AR++ RALKGLV+LQ +VRG++V++Q    ++ MQ +VRVQ+++  +
Sbjct: 324 SATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQIQSR 383

Query: 195 RVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDERPHTIEEVKVM 254
           R+K+ ++ ++     + +   W            + S  G+   D+WD+   T EE    
Sbjct: 384 RIKMLENQAQ----VEKDEAKW------------AASEAGN---DNWDDSVLTKEERDSR 424

Query: 255 LQQRKEAALKRERTLSHAFSQQMWRNGRSSS 285
            Q++ +A +KRER++++A+S+++W+N   S+
Sbjct: 425 SQRKTDAIIKRERSMAYAYSRKLWKNSPKST 455

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score = 98.2 bits (243), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 117/217 (53%), Gaps = 28/217 (12%)

Query: 112 SAHAAAEVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVR 171
           S H A  V R        ++E  AAI+IQ+ FRG+LARR  + ++G  +L+ L+ G  V+
Sbjct: 91  SVHQAIVVNRF----AGKSKEEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQ 146

Query: 172 KQAKMTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMS 231
           +QA +TL+CMQ L RVQ+++  +R+++S++               ++R+ Q +  + +  
Sbjct: 147 RQAAITLKCMQTLSRVQSQIRSRRIRMSEEN--------------QARHKQ-LLQKHAKE 191

Query: 232 REGSSIADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADE 291
             G     +W+    + E+V+  +  + EA ++RER L++AF+ Q  +N +S S      
Sbjct: 192 LGGLKNGGNWNYSNQSKEQVEAGMLHKYEATMRRERALAYAFTHQ--QNLKSFSKTANPM 249

Query: 292 LED--RP----KLLDRWMATKPWESKGRA-STDNRDH 321
             D   P      L+RWMA +PWES  +  +T N D+
Sbjct: 250 FMDPSNPTWGWSWLERWMAGRPWESSEKEQNTTNNDN 286

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3

 Score = 78.6 bits (192), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 72/140 (51%), Gaps = 23/140 (16%)

Query: 91  EHKHAIAMEMATAAAAEAAAASAHAAAEV--ARLIRPPTFNAREIYAA------------ 136
           E    I  E+   +AA+AA       +EV  A  + P    + ++               
Sbjct: 154 EEDDLIGTELQGPSAADAAKIEEDVTSEVEMASKVEPEESESDDVIIVRKESDEKVDEKL 213

Query: 137 -----IVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARV 191
                +VIQ A RG+LARR L   K ++KLQA VRGH VR QA  +LRC+QA+V++QA V
Sbjct: 214 DESVIVVIQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMV 273

Query: 192 LDQRVKLS-QDGSRKSTFSD 210
              R + S +DGSR S  SD
Sbjct: 274 ---RARHSTKDGSRVSATSD 290

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 76.6 bits (187), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 1/72 (1%)

Query: 131 REIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQAR 190
           REI AA  +Q AFRGYLARRA  ALKG+++LQAL+RGH VR+QA  TL  +  +VR+QA 
Sbjct: 112 REI-AATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAF 170

Query: 191 VLDQRVKLSQDG 202
              + ++ S  G
Sbjct: 171 ARGREIRKSDIG 182

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	544
255578224	545	calmodulin binding protein, putative [Ri	0.948	0.946	0.694	0.0
356559797	550	PREDICTED: uncharacterized protein LOC10	0.981	0.970	0.710	0.0
356522486	546	PREDICTED: uncharacterized protein LOC10	0.979	0.976	0.710	0.0
225453606	557	PREDICTED: protein IQ-DOMAIN 14 [Vitis v	0.985	0.962	0.730	0.0
224068133	381	predicted protein [Populus trichocarpa]	0.674	0.963	0.725	1e-152
225426562	533	PREDICTED: uncharacterized protein LOC10	0.957	0.977	0.597	1e-150
147790453	537	hypothetical protein VITISV_042862 [Viti	0.957	0.970	0.596	1e-149
449478027	469	PREDICTED: protein IQ-DOMAIN 14-like [Cu	0.834	0.968	0.572	1e-148
255555773	534	conserved hypothetical protein [Ricinus	0.968	0.986	0.562	1e-147
297814259	534	IQ-domain 17 [Arabidopsis lyrata subsp.	0.926	0.943	0.580	1e-146

>gi|255578224|ref|XP_002529980.1| calmodulin binding protein, putative [Ricinus communis] gi|223530542|gb|EEF32423.1| calmodulin binding protein, putative [Ricinus communis]

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/573 (69%), Positives = 444/573 (77%), Gaps = 57/573 (9%)

Query: 1   MGKRGGTSWLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDD------------------ 42
           MGK+GG+SWLTAVKRAFRSPTK+++K+SSR RRE+HDQE+                    
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPTKDADKRSSR-RREDHDQEEXXVSLICFGTMLMSFLLVLL 59

Query: 43  ---EKKREKRRWLFRKTTNQETVAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHAIAME 99
               +KREKRRWLFRK + QE V QQ  S      A     ST     AA + KHA    
Sbjct: 60  WGFMQKREKRRWLFRKPSVQEPVIQQAPSKAATDKATGGVISTDHVSNAAVDQKHA---- 115

Query: 100 MATAAAAEAAAASAHAAAEVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLV 159
                       ++ AAAE ARL RP T++ARE YAAIVIQTAFRGYLARRALRALKGLV
Sbjct: 116 -----------TASQAAAEAARLTRP-TYHAREHYAAIVIQTAFRGYLARRALRALKGLV 163

Query: 160 KLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESR 219
           KLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRV+LS +GSRKS FSDTN+ + ESR
Sbjct: 164 KLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVRLSHEGSRKSAFSDTNSVI-ESR 222

Query: 220 YLQDISDRRSMSREGSSIADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWR 279
           YLQDISDR+SMSREGSSIADDWDER HT+EEVK MLQ RKEAA+KRE+TLS   SQQ+WR
Sbjct: 223 YLQDISDRKSMSREGSSIADDWDERAHTVEEVKAMLQHRKEAAMKREKTLSQGLSQQIWR 282

Query: 280 NGRSSSMGDADELEDRPKLLDRWMATKPWE-SKGRASTDNRDHIKTVEIDTSQPYSYLAP 338
             RS S+G+ DEL++RP+ LDRW+ATKPW+ S+ RASTD RD IKTVEIDTSQPYSYLAP
Sbjct: 283 TRRSPSIGNDDELQERPQWLDRWIATKPWDSSRARASTDQRDPIKTVEIDTSQPYSYLAP 342

Query: 339 NLRRINHQNQYHQHQQQHGQYQRPASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPR 398
           N RR NH +QYHQ      Q QRP+SP HRAHQ    HHSPVTPSPSK+RP+QVRSASPR
Sbjct: 343 NFRRTNH-SQYHQ------QRQRPSSPLHRAHQTAPHHHSPVTPSPSKSRPVQVRSASPR 395

Query: 399 CPRDDRTYNTSQTPSLRSNYYYTGNVHQQ----SRGGASSSGTLPNYMAATESAKAKARS 454
           C R+DR YN SQTPSLRSNY+YTGN HQ+    S    +S+  LPNYMAATESAKA+ RS
Sbjct: 396 CIREDRIYNPSQTPSLRSNYHYTGNSHQRASGSSNNSNASTAALPNYMAATESAKARIRS 455

Query: 455 QSAPRQRPSTPERDRVGS--AKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHF- 511
           QSAPRQRPSTPERDRVGS  AKKRLSFPVP+PY V MGYG HG  LRSPSFKSV+G HF 
Sbjct: 456 QSAPRQRPSTPERDRVGSATAKKRLSFPVPDPYNVGMGYG-HG--LRSPSFKSVSGVHFG 512

Query: 512 GLEQQSNYSSCYTDSIGGEISPSSTSDLRRWLR 544
           GLEQQSNYSSC T+S+GGEISPSSTSDLRRWLR
Sbjct: 513 GLEQQSNYSSCCTESLGGEISPSSTSDLRRWLR 545

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559797|ref|XP_003548183.1| PREDICTED: uncharacterized protein LOC100799284 [Glycine max]

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/560 (71%), Positives = 460/560 (82%), Gaps = 26/560 (4%)

Query: 1   MGKRG-GTSWLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDDEKKREKRRWLFRKT-TN 58
           MGK+G G+SWLTAVKRAFRSPTK+S+K+S R RRE+ DQE+D+EKKREKRRW+FRKT  +
Sbjct: 1   MGKKGSGSSWLTAVKRAFRSPTKDSDKRSGR-RREDCDQEEDEEKKREKRRWIFRKTHMS 59

Query: 59  QETVAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHAIAMEMATAAAAEAAAASAHAAAE 118
            E V      T ++   H V  S     R  ++ KHA+A+ MATA AA A A +A   A 
Sbjct: 60  HEGVNNNSNHTTQQKVQHDVAASGG-GSRTDQDQKHALAVAMATAEAAMATAQAAAEVAR 118

Query: 119 VARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTL 178
           +++    P  +ARE +AA+VIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTL
Sbjct: 119 LSK----PASHAREHFAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTL 174

Query: 179 RCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIA 238
           RCMQALVRVQARVLDQR++ S +GSRKSTFSDT  +VW+SRYLQDISDR+S+SREGSSIA
Sbjct: 175 RCMQALVRVQARVLDQRIRSSLEGSRKSTFSDT-ASVWDSRYLQDISDRKSISREGSSIA 233

Query: 239 DDWDERPHTIEEVKVMLQQRKEAA-LKRERTLSHAFSQQMWRNGRSSSMGDADELEDRPK 297
           DDWDER H++EEVK ML QRKEAA +KR++TLS AFS+Q+WRNGR+SS+G+ DELE+RPK
Sbjct: 234 DDWDERHHSVEEVKAMLMQRKEAAAMKRDKTLSQAFSEQIWRNGRTSSIGNEDELEERPK 293

Query: 298 LLDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRINHQNQYHQHQQQHG 357
            LDRWMATKPWE++GRASTD RD IKTVEIDTSQPYSYL  N RR +H N  +Q+   H 
Sbjct: 294 WLDRWMATKPWENRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRR-SHPN--YQYNPNHH 350

Query: 358 QYQR--PASPSHRAHQN-PSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRTYNTSQTPSL 414
           Q QR   ASP HR+HQN  SLH SP TPSP+K+RPIQVRSASPRC RDDR+Y+TSQTPSL
Sbjct: 351 QPQRHSIASPLHRSHQNGSSLHQSPATPSPAKSRPIQVRSASPRCVRDDRSYHTSQTPSL 410

Query: 415 RSNYYYTGNVHQQSR---GGASSSG---TLPNYMAATESAKAKARSQSAPRQRPSTPERD 468
           RSNY+YTGN++Q  R    G SS G   TLPNYMAATESAKA+ RSQSAPRQRPSTPERD
Sbjct: 411 RSNYHYTGNLYQNGRIVSTGTSSGGATATLPNYMAATESAKARIRSQSAPRQRPSTPERD 470

Query: 469 RVGSAKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHF-GLEQQSNYSSCYTDSI 527
           RVGSAKKRLSFP P+PYGV + YGN+G +LRSPSFKSV+GSHF GLEQQSNYSSCYT+SI
Sbjct: 471 RVGSAKKRLSFPAPDPYGVGVSYGNYGHSLRSPSFKSVSGSHFGGLEQQSNYSSCYTESI 530

Query: 528 ---GGEISPSSTSDLRRWLR 544
              GGE+SPSST DLRRWLR
Sbjct: 531 GGGGGEVSPSSTGDLRRWLR 550

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522486|ref|XP_003529877.1| PREDICTED: uncharacterized protein LOC100786729 [Glycine max]

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/557 (71%), Positives = 458/557 (82%), Gaps = 24/557 (4%)

Query: 1   MGKRG-GTSWLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDDEKKREKRRWLFRKTTNQ 59
           MGK+G G+SWLTAVKRAFRSPTK+S+K+S R RRE+ DQE+D+EKKREKRRW+FRKT   
Sbjct: 1   MGKKGSGSSWLTAVKRAFRSPTKDSDKRSGR-RREDCDQEEDEEKKREKRRWIFRKTHMS 59

Query: 60  ETVAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHAIAMEMATAAAAEAAAASAHAAAEV 119
                   +T+++    H   ++    R  ++ KHA        A AEAA A+A AA EV
Sbjct: 60  HEGGNNNNNTQQK--LKHDVAASGGGSRTDQDQKHA---VAVAVATAEAAMATAQAAVEV 114

Query: 120 ARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLR 179
           ARL +P + +ARE YAA+VIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLR
Sbjct: 115 ARLSKPAS-HAREHYAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLR 173

Query: 180 CMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIAD 239
           CMQALVRVQARVLDQR++ S +GSRKSTFSDT  +VW+SRYLQDISDR+S+SREGSSI D
Sbjct: 174 CMQALVRVQARVLDQRIRSSLEGSRKSTFSDT-ASVWDSRYLQDISDRKSISREGSSITD 232

Query: 240 DWDERPHTIEEVKVMLQQRKEAA-LKRERTLSHAFSQQMWRNGRSSSMGDADELEDRPKL 298
           DWDER HT+EEVK ML QRKEAA +KR++TLS AFSQQ+WRNGR+SS+G+ DELE+RPK 
Sbjct: 233 DWDERHHTVEEVKAMLMQRKEAAAMKRDKTLSQAFSQQIWRNGRTSSIGNEDELEERPKW 292

Query: 299 LDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRINHQNQYHQHQQQHGQ 358
           LDRWMATKPWE++GRASTD RDHIKTVEIDTSQPYSYL  N RR +H N  +Q+   H Q
Sbjct: 293 LDRWMATKPWENRGRASTDQRDHIKTVEIDTSQPYSYLGTNYRR-SHPN--YQYNPNHHQ 349

Query: 359 YQR--PASPSHRAHQN-PSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRTYNTSQTPSLR 415
            QR   ASP HR+HQN  SLH SP TPSP+K+RPIQVRSASPRC RDDR+Y+TSQTPSLR
Sbjct: 350 PQRHSIASPLHRSHQNGSSLHQSPATPSPAKSRPIQVRSASPRCIRDDRSYHTSQTPSLR 409

Query: 416 SNYYYTGNVHQQSR--GGASSSG----TLPNYMAATESAKAKARSQSAPRQRPSTPERDR 469
           SNY+Y GN++Q  R  G  +S+G    TLPNYMAATESAKA+ RSQSAPRQRPSTPERDR
Sbjct: 410 SNYHYAGNLYQNGRVVGTGTSNGGATATLPNYMAATESAKARIRSQSAPRQRPSTPERDR 469

Query: 470 VGSAKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHF-GLEQQSNYSSCYTDSI- 527
           VGSAKKRLSFP P+PYGV + YGN+G +LRSPSFKSV+GSHF GLEQQSNYSSC T+SI 
Sbjct: 470 VGSAKKRLSFPAPDPYGVGVSYGNYGHSLRSPSFKSVSGSHFGGLEQQSNYSSCCTESIG 529

Query: 528 GGEISPSSTSDLRRWLR 544
           GG++SPSST DLRRWLR
Sbjct: 530 GGQVSPSSTGDLRRWLR 546

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453606|ref|XP_002265121.1| PREDICTED: protein IQ-DOMAIN 14 [Vitis vinifera] gi|296089000|emb|CBI38703.3| unnamed protein product [Vitis vinifera]

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/565 (73%), Positives = 462/565 (81%), Gaps = 29/565 (5%)

Query: 1   MGKRGGTSWLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDDEKKREKRRWLFRKTTNQE 60
           MGK+GG+SWLTAVKRAFRSPTKE++K+S R RREEHDQE+D+EKKREKRRW+FRK TNQE
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPTKETDKRSGR-RREEHDQEEDEEKKREKRRWIFRKPTNQE 59

Query: 61  TVAQQQTSTKERSSAHHVTGSTSQAD-----RAAEEHKHAIAMEMATAAAAEAAAASAHA 115
           T + Q  S    S +    G  +  +      AA E +HAIAM +ATAAAAEAA A+A A
Sbjct: 60  TASPQTQSKVAASFSAGGGGGVAPVNDDVSASAAAEQRHAIAMAVATAAAAEAAVATAQA 119

Query: 116 AAEVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAK 175
           A EVARL RP    A+E YAAIVIQTAFRGYLA+RALRALKGLVKLQALVRGHNVRKQAK
Sbjct: 120 AVEVARLTRPSNHYAKENYAAIVIQTAFRGYLAKRALRALKGLVKLQALVRGHNVRKQAK 179

Query: 176 MTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGS 235
           MTLRCMQALVRVQARVLDQR++LS +GSRKSTFSDTN+ +WESRYLQDI++R+S+SREGS
Sbjct: 180 MTLRCMQALVRVQARVLDQRLRLSHEGSRKSTFSDTNS-LWESRYLQDIAERKSISREGS 238

Query: 236 SIADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDR 295
           SIADDWDERPHTIEEVK MLQ RKEAALKRE+ LS A SQQ+WR GRS SMG+ DELE++
Sbjct: 239 SIADDWDERPHTIEEVKAMLQTRKEAALKREKNLSQALSQQIWRTGRSPSMGNEDELEEK 298

Query: 296 PKLLDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRINHQNQYHQHQQQ 355
           PK LDRWMATKPWES+GRASTD RD IKTVEIDTSQPYSYLAPN RR N QNQY     Q
Sbjct: 299 PKWLDRWMATKPWESRGRASTDQRDPIKTVEIDTSQPYSYLAPNFRRSN-QNQY-----Q 352

Query: 356 HGQYQRP-----ASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRTYNTSQ 410
             Q+QRP     ASP HRAHQN S H SP+TPSPSKTRP+QVRSASPRC R+DR+ +TSQ
Sbjct: 353 PNQFQRPNSHSVASPLHRAHQNVSHHQSPITPSPSKTRPLQVRSASPRCGREDRSLHTSQ 412

Query: 411 TPSLRSNYYYTGNVHQQSRGGASSSG-----TLPNYMAATESAKAKARSQSAPRQRPSTP 465
           TPSLRSNYYY G +HQQ RG  +S G      LPNYMAATES KA+ RSQSAPRQRPSTP
Sbjct: 413 TPSLRSNYYYNGGLHQQGRGATTSGGGSGGPALPNYMAATESTKARVRSQSAPRQRPSTP 472

Query: 466 ERDR------VGSAKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHFGLEQQSNY 519
           ER+R       GSA+KRLSFP P+PY   +GYG +G NLRSPSFKSV G + GLEQQSNY
Sbjct: 473 ERERGGPGSVSGSARKRLSFPAPDPYSGGIGYGGYGHNLRSPSFKSVGGGYLGLEQQSNY 532

Query: 520 SSCYTDSIGGEISPSSTSDLRRWLR 544
           SSC TDS+GGEISPSSTSDLRRW+R
Sbjct: 533 SSCCTDSLGGEISPSSTSDLRRWMR 557

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068133|ref|XP_002302670.1| predicted protein [Populus trichocarpa] gi|222844396|gb|EEE81943.1| predicted protein [Populus trichocarpa]

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 278/383 (72%), Positives = 316/383 (82%), Gaps = 16/383 (4%)

Query: 176 MTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGS 235
           MTLRCMQAL RVQARVLDQRV+LS +GSRKS FSDTN+ V ESRYLQDISDR+SMSRE S
Sbjct: 1   MTLRCMQALARVQARVLDQRVRLSHEGSRKSAFSDTNS-VLESRYLQDISDRKSMSRESS 59

Query: 236 SIADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDR 295
           SIADDWD+RPH+IEEVK MLQ+RKEAA KRE+TLS AFSQQ+WRNGRS S G+ DEL++R
Sbjct: 60  SIADDWDDRPHSIEEVKAMLQRRKEAAFKREKTLSQAFSQQIWRNGRSPSNGNEDELQER 119

Query: 296 PKLLDRWMATKPWE--SKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRINHQNQYHQHQ 353
           P+ LD+WM  KPW+  S+ RASTD RD IKTVEIDTSQPYSYL PN RR N QNQ+HQHQ
Sbjct: 120 PQWLDQWMPAKPWDNSSRARASTDQRDPIKTVEIDTSQPYSYLVPNFRRTN-QNQHHQHQ 178

Query: 354 Q----QHGQYQRPASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRTYNTS 409
           +     +G      SP HRAHQ   LHHSP+TPSPSKTRP+QVRSASPRC R+DR+ N+S
Sbjct: 179 RSNSSNNGVAHSAPSPLHRAHQTAPLHHSPITPSPSKTRPLQVRSASPRCAREDRSCNSS 238

Query: 410 QTPSLRSNYYYTGNVHQQS-RGGASSS----GTLPNYMAATESAKAKARSQSAPRQRPST 464
           QTPSLRSNY+Y G+++Q   RGGAS S     TLPNYMAATESAKA+ RSQSAPRQRPST
Sbjct: 239 QTPSLRSNYFYNGSLNQHGIRGGASVSSNGNATLPNYMAATESAKARLRSQSAPRQRPST 298

Query: 465 PERDRVGSAKKRLSFPVPEPYGVAMGYG--NHGQNLRSPSFKSVAGSHF-GLEQQSNYSS 521
           PERDR+GSA+KRLS+P P+P  V + YG   +G  LRSPSFKSV+GS   GLEQQSNYSS
Sbjct: 299 PERDRIGSARKRLSYPAPDPCDVGIVYGGAGYGHGLRSPSFKSVSGSRLGGLEQQSNYSS 358

Query: 522 CYTDSIGGEISPSSTSDLRRWLR 544
           C TDS GGE+SPSST+DLRRWLR
Sbjct: 359 CCTDSFGGELSPSSTNDLRRWLR 381

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426562|ref|XP_002272492.1| PREDICTED: uncharacterized protein LOC100263362 [Vitis vinifera]

 Score =  536 bits (1381), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 332/556 (59%), Positives = 412/556 (74%), Gaps = 35/556 (6%)

Query: 1   MGKRGGTSWLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDDEKKREKRRWLFRKTTNQE 60
           MGK+GG+SWLT VKRAFRSP K++EKKSSR+R E  + E+++E+KREKRRW+FRK T   
Sbjct: 1   MGKKGGSSWLTVVKRAFRSPIKDNEKKSSRRREEH-ELEEEEEEKREKRRWIFRKPTTTT 59

Query: 61  T----VAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHAIAMEMATAAAAEAAAASAHAA 116
           T    V  Q+  TK       +  S         E +HAIA+  ATAAAAEAA A+A AA
Sbjct: 60  TTTNHVQVQECETK-------MISSVPTNPILVAEQRHAIAVAAATAAAAEAAVATAQAA 112

Query: 117 AEVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKM 176
            E+ RL RP +F  RE YAA+VIQTAFRGYLAR ALRALKGLVKLQALVRGHNVRKQAKM
Sbjct: 113 VEIVRLTRPSSF-FREHYAAVVIQTAFRGYLARTALRALKGLVKLQALVRGHNVRKQAKM 171

Query: 177 TLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSS 236
           TL+CMQALVRVQ+RV DQR +LS +GSR+S F++TN+ +WESRYLQ+I  R+SMSR+ SS
Sbjct: 172 TLKCMQALVRVQSRVRDQRARLSHEGSRRSMFAETNS-LWESRYLQEIRHRKSMSRDRSS 230

Query: 237 IADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDRP 296
           IAD+   RPH IEE++ M + RKE ALKRE+ L++AFS Q+WR+GR+   GD ++LE+R 
Sbjct: 231 IADECCGRPHEIEEIEAMFRSRKEGALKREKALAYAFSHQVWRSGRNPFAGDEEDLEERT 290

Query: 297 KLLDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRIN-HQNQYHQHQQQ 355
           K L RWMATK WES  RASTD RD IKTVEIDTS+PYSY A N+RR + +QNQ+ +    
Sbjct: 291 KWLQRWMATKRWESSSRASTDKRDAIKTVEIDTSRPYSYSASNVRRSSVYQNQHLRPPTP 350

Query: 356 HGQYQRPASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRTYNTSQTPSLR 415
           H      ASP H+AH N SLH SPVTPSPSKTRP+QVRSASPRC +++ +++T+ TP+L 
Sbjct: 351 HST----ASPFHKAHHNLSLHLSPVTPSPSKTRPLQVRSASPRCLKEEESHSTAHTPNLA 406

Query: 416 SNYYYTGNVHQQ--SRGGASSSGTLPNYMAATESAKAKARSQSAPRQRPSTPERDR-VGS 472
           S + + G++ +Q  S  G  +S  LPNYMAATESAKA+ RS+SAPRQ+PSTPER+R  GS
Sbjct: 407 SIHCFNGSMCRQGASTNGDVASAVLPNYMAATESAKARVRSESAPRQKPSTPERERGGGS 466

Query: 473 AKKRLSFPVPE-PYGVAMGYGNH--GQNLRSPSFKSVAGSHFGLEQQSNYSSCYTDSIGG 529
           A+KRLS+PVPE P        +    ++LRSPSFKSV          +N SSCYTDS+GG
Sbjct: 467 ARKRLSYPVPEAPLSSTSTTCSSMLSKSLRSPSFKSV---------HANLSSCYTDSLGG 517

Query: 530 EISPSSTS-DLRRWLR 544
           EISP++TS + R WLR
Sbjct: 518 EISPTTTSTEQRGWLR 533

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790453|emb|CAN76669.1| hypothetical protein VITISV_042862 [Vitis vinifera]

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 334/560 (59%), Positives = 412/560 (73%), Gaps = 39/560 (6%)

Query: 1   MGKRGGTSWLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDDEKKREKRRWLFRK----- 55
           MGK+GG+SWLTAVKRAFRSP K++EKKSSR+R +   +E+++EKKREKRRW+FRK     
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPXKDNEKKSSRRREDHELEEEEEEKKREKRRWIFRKPTTTT 60

Query: 56  TTNQETVAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHAIAMEMATAAAAEAAAASAHA 115
           TT +     Q+  TK  SS    T     A     E +HAIA+  ATAAAAEAA A+A A
Sbjct: 61  TTTKSCFKFQECETKMISSTTVPTNPILVA-----EQRHAIAVAAATAAAAEAAVATAQA 115

Query: 116 AAEVARLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAK 175
           A E+ RL RP +F  RE YAA+VIQTAFRGYLAR ALRALKGLVKLQALVRGHNVRKQAK
Sbjct: 116 AVEIVRLTRPSSF-FREHYAAVVIQTAFRGYLARTALRALKGLVKLQALVRGHNVRKQAK 174

Query: 176 MTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGS 235
           MTL+CMQALVRVQ+RV DQR +LS +GSR+S F++TN+ +WESRYLQ+I  R+SMSR+ S
Sbjct: 175 MTLKCMQALVRVQSRVRDQRARLSHEGSRRSMFAETNS-LWESRYLQEIRHRKSMSRDRS 233

Query: 236 SIADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDR 295
           SIAD+    PH IEE++ M + RKE ALKRE+ L++AFS Q+WR+GR+   GD ++LE+R
Sbjct: 234 SIADECCGXPHXIEEIEAMFRSRKEGALKREKALAYAFSHQVWRSGRNPFAGDEEDLEER 293

Query: 296 PKLLDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRIN-HQNQYHQHQQ 354
            K L RWMATK WES  RASTD RD IKTVEIDTS+PYS  A N+RR + +QNQ+ +   
Sbjct: 294 TKWLQRWMATKRWESSSRASTDKRDAIKTVEIDTSRPYSXSASNVRRSSVYQNQHLRPPT 353

Query: 355 QHGQYQRPASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRTYNTSQTPSL 414
            H      ASP H+AH N SLH SPVTPSPSKTRP+QVRSASPRC +++ +++T+ TP+L
Sbjct: 354 PHST----ASPFHKAHHNLSLHXSPVTPSPSKTRPLQVRSASPRCLKEEESHSTAHTPNL 409

Query: 415 RSNYYYTGNVHQQSRGGASSSG-----TLPNYMAATESAKAKARSQSAPRQRPSTPERDR 469
            S + + G+     R GAS++G      LPNYMAATESAKA+ RS+SAPRQ PSTPER+R
Sbjct: 410 ASIHCFNGS---XCRXGASTNGDVASAVLPNYMAATESAKARVRSESAPRQXPSTPERER 466

Query: 470 -VGSAKKRLSFPVPE-PYGVAMGYGNH--GQNLRSPSFKSVAGSHFGLEQQSNYSSCYTD 525
             GSA+KRLS+PVPE P        +    ++LRSPSFKSV          +N SSCYTD
Sbjct: 467 GGGSARKRLSYPVPEAPLSSTSTTCSSMLSKSLRSPSFKSV---------HANXSSCYTD 517

Query: 526 SIGGEISPSSTS-DLRRWLR 544
           S+GGEISP++TS + R WLR
Sbjct: 518 SLGGEISPTTTSTEQRGWLR 537

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478027|ref|XP_004155200.1| PREDICTED: protein IQ-DOMAIN 14-like [Cucumis sativus]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 320/559 (57%), Positives = 366/559 (65%), Gaps = 105/559 (18%)

Query: 1   MGKRGGTSWLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDDEKKREKRRWLFRKTTNQE 60
           MGK+GG+SWLTAVKRAFRSP+K                 D+D KK EKRRW FR++TN  
Sbjct: 1   MGKKGGSSWLTAVKRAFRSPSK-----------------DEDHKKTEKRRWGFRRSTN-- 41

Query: 61  TVAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHAIAMEMATAAAAEAAAASAHAAAEVA 120
            +  Q T         H T S   +D A           M TA           AA +VA
Sbjct: 42  -LHDQVT---------HQTPSNPSSDAALAAAVATAEAAMVTA----------QAAVQVA 81

Query: 121 RLIRP--PTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTL 178
           RL     P+ NAR+ YAAI+IQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTL
Sbjct: 82  RLTTSTRPSNNARDHYAAILIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTL 141

Query: 179 RCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIA 238
           RCMQALVRVQARVLDQR++LS + S  ST SD +T +  SRYLQ +SDR           
Sbjct: 142 RCMQALVRVQARVLDQRMRLSHEESGNSTLSDPSTAL-GSRYLQYLSDR----------- 189

Query: 239 DDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDRPKL 298
                               KE A+KR+R LS    QQ+WR GRS SMG  D+LE+RPK 
Sbjct: 190 --------------------KEFAMKRDRNLS----QQIWRRGRSPSMGSGDDLEERPKW 225

Query: 299 LDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRINHQNQYHQHQQQHGQ 358
           LD+W + K WES+GRASTD RD IKTVEIDT QPY+  + N RR+    Q  Q    H  
Sbjct: 226 LDQWNSRKAWESRGRASTDQRDPIKTVEIDTFQPYTRTSSNFRRM---AQNLQRTNPHSG 282

Query: 359 YQRPASPSHRAHQNP-SLHHSPVTPSPSKTRP-IQVRSASPRCPRDDRTYNTSQTPSLRS 416
               +SP +R  QN  S HHSP TPSPSKTRP +QVRSASPR  R+D++ NTSQTPSLRS
Sbjct: 283 ----SSPLNRMQQNVYSFHHSPATPSPSKTRPMLQVRSASPRFVREDKSDNTSQTPSLRS 338

Query: 417 NYYYTGNVHQQSRGGASSS-----GTLPNYMAATESAKAKARSQSAPRQRPSTPERDR-- 469
           NYYY+GN+ QQ R GASSS       LPNYMAATESAKA+ RSQSAPRQR STPER+R  
Sbjct: 339 NYYYSGNLVQQGRSGASSSYGGDGNCLPNYMAATESAKARLRSQSAPRQRASTPERERER 398

Query: 470 ----VGSAKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHFGLEQQSNYSSCYTD 525
               VG AKKRLSFPV +P G       HG  LRSPSFKSV+G++ G+EQQSNYSSC T+
Sbjct: 399 EKGGVGCAKKRLSFPVADPIG-------HGV-LRSPSFKSVSGTYLGMEQQSNYSSCCTE 450

Query: 526 SIGGEISPSSTSDLRRWLR 544
           S+GGEISPSSTSDLRRWLR
Sbjct: 451 SLGGEISPSSTSDLRRWLR 469

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555773|ref|XP_002518922.1| conserved hypothetical protein [Ricinus communis] gi|223541909|gb|EEF43455.1| conserved hypothetical protein [Ricinus communis]

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 309/549 (56%), Positives = 389/549 (70%), Gaps = 22/549 (4%)

Query: 1   MGKRGGTSWLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDDEKKREKRRWLFRKTTNQE 60
           M K+ GTSWLT VKRAFRSP KE+E KSSR+R E   +E++ ++++ +  WLFRKT +  
Sbjct: 1   MEKKSGTSWLTIVKRAFRSPIKENETKSSRRREEHVQEEEEKKREKRR--WLFRKTNSNS 58

Query: 61  TVAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHAIAMEMATAAAAEAAAASAHAAAEVA 120
              QQ  +    ++    T +   +     +  HAIA+   TAAAAEAAAA+A AA E+ 
Sbjct: 59  IHVQQYEAKTVTNTNDAATNTIPVSPALGAQQSHAIAVAAVTAAAAEAAAATAQAAVEIV 118

Query: 121 RLIRPPTFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRC 180
           RL RP  F  RE  AA++IQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAK+TL+C
Sbjct: 119 RLTRPSGF-VRERRAAVIIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKLTLKC 177

Query: 181 MQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADD 240
           MQALVRVQ RV DQR +LS +GSRKS F++T+  +WESRYLQ++ +RRS+SR+ S I DD
Sbjct: 178 MQALVRVQDRVRDQRARLSHEGSRKSMFAETD-GLWESRYLQEVRERRSLSRDLSFILDD 236

Query: 241 WDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDRPKLLD 300
           WD+R +T  E++ ++Q +KEAALKRE+ L++AFS Q+WR+ R+ S GD  ELE+R + LD
Sbjct: 237 WDDRQYTSGELEAIVQNKKEAALKREKALAYAFSSQIWRSRRNPSAGDEKELEERTRWLD 296

Query: 301 RWMATKPWESK-GRASTDNRDHIKTVEIDTSQPYSYLAPNLRRINHQNQYHQHQQQHGQY 359
           RWMATK WES   R STD R+ IKTVEIDTS+PYSY  P       Q+Q HQ +Q     
Sbjct: 297 RWMATKQWESNSSRGSTDRREAIKTVEIDTSRPYSYSTPTSFVRRSQSQNHQQKQPSPSL 356

Query: 360 QRPASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRTYNTSQTPSLRSNYY 419
            R        H N  LH SP+TPSP KT+P+QVRSASPRCP++++ ++ + TPSL S Y 
Sbjct: 357 LRAP-----VHHNLCLHQSPITPSPCKTKPLQVRSASPRCPKEEKCFSAAHTPSLSSRYR 411

Query: 420 YTGNVHQQSRGGASSSGTLPNYMAATESAKAKARSQSAPRQRPSTPERDRVG--SAKKRL 477
           Y          G +++  +PNYMAATESAKA+ RSQSAPRQRPSTPER+R G  SAKKRL
Sbjct: 412 YGMGA-----SGVNTAAAIPNYMAATESAKARVRSQSAPRQRPSTPERERGGSSSAKKRL 466

Query: 478 SFPVPEPYG---VAMGYGNHGQNLRSPSFKSVAGSHFGLEQQSNYSSCYTDSIGGEISPS 534
           S+P PEP+    +     +  QNLRSPSFKSV     G++ +SNY S YT+SIGGEISP 
Sbjct: 467 SYPAPEPHCSNIIGCSNSSFSQNLRSPSFKSVQCGLLGMDHRSNY-SFYTESIGGEISPC 525

Query: 535 STSDLRRWL 543
           ST+DL RWL
Sbjct: 526 STTDL-RWL 533

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297814259|ref|XP_002875013.1| IQ-domain 17 [Arabidopsis lyrata subsp. lyrata] gi|297320850|gb|EFH51272.1| IQ-domain 17 [Arabidopsis lyrata subsp. lyrata]

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 322/555 (58%), Positives = 381/555 (68%), Gaps = 51/555 (9%)

Query: 9   WLTAVKRAFRSPTKESEKKSSRQRREEHDQEDDDEKKREKRRWLFRKTTNQETVAQQQTS 68
           WLTAVKRAFRSPTK+    ++      +  ++D++KK+EK+RWLFRK TN ++  +    
Sbjct: 12  WLTAVKRAFRSPTKKEHNNNA----HGNAVDEDEDKKKEKKRWLFRKPTNHDSPVKTSGV 67

Query: 69  TKERSSAHHVTGSTSQADRAAEEHKHAIAMEMATAAAAEAAAASAHAAAEVARLIRPP-- 126
            KE  +      +T     ++   K       +T     +AA+  H       L+     
Sbjct: 68  GKEVPAQKSTDTTTINPTASSSVTKQRYTA--STPPTTFSAASETHPPPPTMELLNLTRR 125

Query: 127 TFNAREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVR 186
           T+ ARE YAA+VIQT FRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVR
Sbjct: 126 TYTAREDYAAVVIQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVR 185

Query: 187 VQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDERPH 246
           VQ+RVLDQR +LS DGSRKS FSDT  +V ESRYLQDISDRRSMSREGSSIA+DWD+RPH
Sbjct: 186 VQSRVLDQRKRLSHDGSRKSAFSDTQ-SVLESRYLQDISDRRSMSREGSSIAEDWDDRPH 244

Query: 247 TIEEVKVMLQQRKEAALKRE--RTLSHAFSQQMWRNGRSSSMGDADELEDRPKLLDRWMA 304
           TIEEVK MLQQR++ AL+RE   +LS A+S Q+ R   S S GD DE E+RPK LDRWMA
Sbjct: 245 TIEEVKAMLQQRRDNALRRESNNSLSQAYSHQVRRTRGSYSTGDEDE-EERPKWLDRWMA 303

Query: 305 TKPWESKGRASTDNR--DHIKTVEIDTSQPYSYLAPNLRRINHQNQYHQHQQQHGQYQRP 362
           +KPW+   RASTD R     KTVEIDTSQPY      L R N +      +      QRP
Sbjct: 304 SKPWDK--RASTDQRVPPVYKTVEIDTSQPY------LTRGNSRTGASPSRN-----QRP 350

Query: 363 ASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRT-YN-TSQTPSLRSNYYY 420
           +SPS  +H     + S  TPSP+K+RPIQ+RSASPR  RDDR+ YN TS TPSLRSNY +
Sbjct: 351 SSPSRTSHHYQQHNFSSATPSPAKSRPIQIRSASPRIQRDDRSAYNYTSNTPSLRSNYSF 410

Query: 421 TGNVHQQSRGGASSS--------GTLPNYMAATESAKAKARSQSAPRQRPSTPERDRVGS 472
           T      +R G S S          LPNYMA TESAKA+ RSQSAPRQRPSTPE++R+GS
Sbjct: 411 T------ARSGYSVSTATTTATNAALPNYMAITESAKARIRSQSAPRQRPSTPEKERIGS 464

Query: 473 AKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHFG-LEQQSNYSSCYTDSI--GG 529
           A+KRLSFPVP      +     GQ+LRSPSFKS+ GS  G LEQQSNYSSC T+S+  GG
Sbjct: 465 ARKRLSFPVP-----PLPQQIDGQSLRSPSFKSIGGSQLGALEQQSNYSSCCTESLGGGG 519

Query: 530 EISPSSTSDLRRWLR 544
           EISP+STSD RRWLR
Sbjct: 520 EISPASTSDYRRWLR 534

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	544
TAIR|locus:2134628	534	iqd17 "AT4G00820" [Arabidopsis	0.952	0.970	0.539	6.4e-131
TAIR|locus:2200945	527	IQD18 "AT1G01110" [Arabidopsis	0.935	0.965	0.517	1.4e-126
TAIR|locus:2139187	423	IQD16 "AT4G10640" [Arabidopsis	0.393	0.505	0.441	2e-45
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.316	0.413	0.422	6.9e-31
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.599	0.772	0.301	1.3e-28
TAIR|locus:2130200	387	IQD19 "AT4G14750" [Arabidopsis	0.128	0.180	0.541	3.3e-22
TAIR|locus:2082946	352	iqd15 "AT3G49380" [Arabidopsis	0.202	0.312	0.414	4.4e-22
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.610	0.720	0.272	1.5e-21
TAIR|locus:2181635	443	IQD11 "AT5G13460" [Arabidopsis	0.240	0.295	0.337	2.2e-20
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.365	0.462	0.318	5.8e-19

TAIR|locus:2134628 iqd17 "AT4G00820" [Arabidopsis thaliana (taxid:3702)]

 Score = 1284 (457.0 bits), Expect = 6.4e-131, P = 6.4e-131
 Identities = 302/560 (53%), Positives = 358/560 (63%)

Query:     1 MGKRGGTS--WLTAVKRAFRSPTKESEKKSSXXXXXXXXXXXXXXXXXXXXXWLFRKTTN 58
             MGK+ G+S  WLTAVKRAFRSPTK+    ++                     WLFRK+TN
Sbjct:     1 MGKKSGSSSSWLTAVKRAFRSPTKKEHNNNAHGNEVDEDEDKKKEKRR----WLFRKSTN 56

Query:    59 QETVAQQQTSTKERSSAHHVTGSTSQADR---AAEEHKHXXXXXXXXXXXXXXXXXXXXX 115
              ++  +     K+ + A   T +T+  +    ++   +                      
Sbjct:    57 HDSPVKTSGVGKD-APAQKSTETTTIINPTVLSSVTEQRYDASTPPATVSAASETHPPST 115

Query:   116 XXXXXRLIRPPTFNAREIYAAIVIQTAFRGYXXXXXXXXXKGLVKLQALVRGHNVRKQAK 175
                   L R  T+ ARE YAA+VIQT FRGY         KGLVKLQALVRGHNVRKQAK
Sbjct:   116 TKELPNLTRR-TYTAREDYAAVVIQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAK 174

Query:   176 MTLRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGS 235
             MTLRCMQALVRVQ+RVLDQR +LS DGSRKS FSDT + V ESRYLQ+ISDRRSMSREGS
Sbjct:   175 MTLRCMQALVRVQSRVLDQRKRLSHDGSRKSAFSDTQS-VLESRYLQEISDRRSMSREGS 233

Query:   236 SIADDWDERPHTIEEVKVMLQQRKEAALKRE--RTLSHAFSQQMWRNGRSSSMGDADELE 293
             SIA+DWD+RPHTIEEVK MLQQR++ AL+RE   ++S AFS Q+ R   S S GD  E E
Sbjct:   234 SIAEDWDDRPHTIEEVKAMLQQRRDNALRRESNNSISQAFSHQVRRTRGSYSTGDEYE-E 292

Query:   294 DRPKLLDRWMATKPWESKGRASTDNR--DHIKTVEIDTSQPYSYLAPNLRRIXXXXXXXX 351
             +RPK LDRWMA+KPW+   RASTD R     KTVEIDTSQPY      L R         
Sbjct:   293 ERPKWLDRWMASKPWDK--RASTDQRVPPVYKTVEIDTSQPY------LTR-----GNSR 339

Query:   352 XXXXXXXXXRPASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRCPRDDRT-YN-TS 409
                      RP+SPS  +H     + S  TPSP+K+RPIQ+RSASPR  RDDR+ YN TS
Sbjct:   340 TGASPSRSQRPSSPSRTSHHYQQHNFSSATPSPAKSRPIQIRSASPRIQRDDRSAYNYTS 399

Query:   410 QTPSLRSNYYYTGNVHQQ--SRGGASSSGTLPNYMAATESAKAKARSQSAPRQRPSTPER 467
              TPSLRSNY +T        +    +++  LPNYMA TESAKA+ RSQSAPRQRPSTPE+
Sbjct:   400 NTPSLRSNYSFTARSGYSVCTTTTTATNAALPNYMAITESAKARIRSQSAPRQRPSTPEK 459

Query:   468 DRVGSAKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHFG-LEQQSNYSSCYTDS 526
             +R+ SA+KRLSFPVP P    M     GQ+LRSPSFKS+ GS  G LEQQSNYSSC T+S
Sbjct:   460 ERISSARKRLSFPVP-PLPQQMD----GQSLRSPSFKSIGGSQLGALEQQSNYSSCCTES 514

Query:   527 IGG--EISPSSTSDLRRWLR 544
             +GG  EISP+STSD RRWLR
Sbjct:   515 LGGGGEISPASTSDYRRWLR 534

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2200945 IQD18 "AT1G01110" [Arabidopsis thaliana (taxid:3702)]

 Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
 Identities = 291/562 (51%), Positives = 352/562 (62%)

Query:     1 MGKRGGTS-WLTAVKRAFRSPTKESEKKSSXXXXXXXXXXXXXXXXXXXXXWLFRKTTNQ 59
             MGK+ G+S WLTAVKRAFRSPTK+                           W FRK   Q
Sbjct:     1 MGKKNGSSSWLTAVKRAFRSPTKKDHSND---------VEEDEEKKREKRRW-FRKPATQ 50

Query:    60 ETVAQQQTSTKERSSAHHVTGSTSQADRAAEEHKHXXXXXXXXXXXXXXXXXXXXXXXXX 119
             E+  +    +        +  ++  +   A  +                           
Sbjct:    51 ESPVKSSGISPPAPQEDSLNVNSKPSPETAPSY----ATTTPPSNAGKPPSAVVPIATSA 106

Query:   120 XRLIRPPT-FNAREIYAAIVIQTAFRGYXXXXXXXXXKGLVKLQALVRGHNVRKQAKMTL 178
              + + P   + ARE YAA+VIQT+FRGY         KGLVKLQALVRGHNVRKQAKMTL
Sbjct:   107 SKTLAPRRIYYARENYAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTL 166

Query:   179 RCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIA 238
             RCMQALVRVQ+RVLDQR +LS DGSRKS FSD++  V+ESRYLQD+SDR+SMSREGSS A
Sbjct:   167 RCMQALVRVQSRVLDQRKRLSHDGSRKSAFSDSHA-VFESRYLQDLSDRQSMSREGSSAA 225

Query:   239 DDWDERPHTIEEVKVMLQQRKEAALKRERT-LSHAFSQQMWRN-GRSSSMGDAD-ELED- 294
             +DWD+RPHTI+ VKVMLQ+R++ AL+ ++T LS AFSQ+MWR  G  S+ G  + ELE+ 
Sbjct:   226 EDWDDRPHTIDAVKVMLQRRRDTALRHDKTNLSQAFSQKMWRTVGNQSTEGHHEVELEEE 285

Query:   295 RPKLLDRWMATKPWESKG--RASTDNRDHIKTVEIDTSQPYSYLAPNLRRIXXXXXXXXX 352
             RPK LDRWMAT+PW+ +   RAS D R  +KTVEIDTSQPYS                  
Sbjct:   286 RPKWLDRWMATRPWDKRASSRASVDQRVSVKTVEIDTSQPYS---------------RTG 330

Query:   353 XXXXXXXXRPASPSHRAHQNPSLHHSPVTPSPSKTRPIQVRSASPRC---PRDDR---TY 406
                     RP+SPS  +H   S ++   TPSP+K+RPI +RSASPRC   PR+DR    Y
Sbjct:   331 AGSPSRGQRPSSPSRTSHHYQSRNNFSATPSPAKSRPILIRSASPRCQRDPREDRDRAAY 390

Query:   407 N-TSQTPSLRSNYYYTGNVHQQ-SRGGASSSGTLPNYMAATESAKAKARSQSAPRQRPST 464
             + TS TPSLRSNY +T       S    +++  LPNYMA+TESAKA+ RS SAPRQRPST
Sbjct:   391 SYTSNTPSLRSNYSFTARSGCSISTTMVNNASLLPNYMASTESAKARIRSHSAPRQRPST 450

Query:   465 PERDRVGSAKKRLSFPVPEPYGVAMGYGNHGQNLRSPSFKSVAGSHFG--LEQQSNYSSC 522
             PERDR G  KKRLS+PVP P      Y ++  +LRSPSFKSVAGSHFG  LEQQSNYSSC
Sbjct:   451 PERDRAGLVKKRLSYPVPPP----AEYEDNN-SLRSPSFKSVAGSHFGGMLEQQSNYSSC 505

Query:   523 YTDSIGGEISPSSTSDLRRWLR 544
              T+S G EISP+STSD R WLR
Sbjct:   506 CTESNGVEISPASTSDFRNWLR 527

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2139187 IQD16 "AT4G10640" [Arabidopsis thaliana (taxid:3702)]

 Score = 399 (145.5 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
 Identities = 106/240 (44%), Positives = 148/240 (61%)

Query:   121 RLIRPPTFNAREIYAAIVIQTAFRGYXXXXXXXXXKGLVKLQALVRGHNVRKQAKMTLRC 180
             +L   P F  R  +AAI+IQTAFRGY         KG+VKLQALVRG+NVR QAK+TLRC
Sbjct:    89 KLTATPGFIRRH-WAAIIIQTAFRGYLSRRALRALKGIVKLQALVRGNNVRNQAKLTLRC 147

Query:   181 MQALVRVQARVLDQ------RVKLSQ-------DGSRKSTFSDTNTTVWESR-YLQDISD 226
             ++ALVRVQ +VL+       RV LS        +  R S F+++N   W+++ YLQDI  
Sbjct:   148 IKALVRVQDQVLNHHQQQRSRVLLSPPSRNYNIEARRNSMFAESNG-FWDTKTYLQDIRS 206

Query:   227 RRSMSREGSSIADDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMW-RNGRSSS 285
             RRS+SR+ +   +++       EE +++LQ++ E A+KRE+  + A S Q+  R+ R+ S
Sbjct:   207 RRSLSRDMNRCNNEFYS-----EETELILQKKLEIAIKREKAQALALSNQIRSRSSRNQS 261

Query:   286 MGDADELEDRPKLLDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPY--SYLA--PNLR 341
              GD  EL +R + LDRWMATK W+     ST+ RD IKT+E  T+  +  SY A  P+ R
Sbjct:   262 AGDDRELLERTQWLDRWMATKQWDDTITNSTNVRDPIKTLEAVTTHHHQRSYPATPPSCR 321

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 84/199 (42%), Positives = 118/199 (59%)

Query:   125 PPTFNA-REIYAAIVIQTAFRGYXXXXXXXXXKGLVKLQALVRGHNVRKQAKMTLRCMQA 183
             P  F A RE +AAI IQTAFRG+         KG+V+LQALVRG  VRKQA +TLRCMQA
Sbjct:    75 PKDFKAVREEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQA 134

Query:   184 LVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDE 243
             LVRVQARV  +RV+++ +G       D + T  +S  L+++        EG      W +
Sbjct:   135 LVRVQARVRARRVRMTVEGQAVQKLLDEHRT--KSDLLKEVE-------EG------WCD 179

Query:   244 RPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELE-------DRP 296
             R  T++++K  LQQR+E A KRER L++A +Q+ WR+  SS++     +        D+ 
Sbjct:   180 RKGTVDDIKSKLQQRQEGAFKRERALAYALAQKQWRSTTSSNLKTNSSISYLKSQEFDKN 239

Query:   297 KL----LDRWMATKPWESK 311
                   L+RWMA +PWE++
Sbjct:   240 SWGWSWLERWMAARPWETR 258

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.3e-28, P = 1.3e-28
 Identities = 106/352 (30%), Positives = 164/352 (46%)

Query:   130 AREIYAAIVIQTAFRGYXXXXXXXXXKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQA 189
             +RE  AA  IQTA+RG+         KGLV+LQALVRGH VRKQA +TLRCMQALVRVQA
Sbjct:    85 SRENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQA 144

Query:   190 RVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDERPHTIE 249
             RV  +RV+L+ +       S+T+    +    Q ++D   + RE   I + W +   ++E
Sbjct:   145 RVRARRVRLALELE-----SETSQQTLQ----QQLADEARV-RE---IEEGWCDSIGSVE 191

Query:   250 EVKVMLQQRKEAALKRERTLSHAFSQQMWRNGR---SSSMG-DADELEDRPKLLDRWMAT 305
             +++  L +R+EAA KRER +++A + Q W+ G    S+  G   D+       L+RWMA 
Sbjct:   192 QIQAKLLKRQEAAAKRERAMAYALTHQ-WQAGTRLLSAHSGFQPDKNNWGWNWLERWMAV 250

Query:   306 KPWESKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRIXXXXXXXXXXXXXXXXXRPASP 365
             +PWE++   S + RD  K  E    Q  +     ++ +                      
Sbjct:   251 RPWENRFLDS-NLRDDAKLGENGMEQSENVPKTQIKSVSKMPNTSNLVSGVSSQMTGPCQ 309

Query:   366 SHRAHQNPSLHHSPVTPSPSKTRP------IQVRSASPRCPRD-DRTYNTSQTPSLRSNY 418
             S     +P +  S    S +K++P      ++V S     PR        S+ P+  S  
Sbjct:   310 SDGDSSSPGISSSIPVVSKAKSKPAKDDLAVEVNSRPGAGPRSHSNPKERSREPNRSSKE 369

Query:   419 YYTGNVHQQSRGGASSSGTLPNYMAATESAKAKARSQSAPRQRPSTPERDRV 470
               +     +S G  S+       +        + +S    R+R S P + R+
Sbjct:   370 RLSLPNSGKSLGSQSTKANRAGKLTPASQKVVEEKSAQNQRRRNSDPIKQRL 421

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2130200 IQD19 "AT4G14750" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.3e-22, Sum P(3) = 3.3e-22
 Identities = 39/72 (54%), Positives = 50/72 (69%)

Query:   129 NAREI--YAAIVIQTAFRGYXXXXXXXXXKGLVKLQALVRGHNVRKQAKMTLRCMQALVR 186
             +A EI  +AAI IQ  +R +         KGLVKLQALVRGH VRKQA  TLRCMQAL+ 
Sbjct:    99 SAEEIEEFAAIKIQACYRSHLARKALRALKGLVKLQALVRGHLVRKQATATLRCMQALIT 158

Query:   187 VQARVLDQRVKL 198
             +QA+  +QR+++
Sbjct:   159 LQAKAREQRIRM 170

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2082946 iqd15 "AT3G49380" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 4.4e-22, Sum P(3) = 4.4e-22
 Identities = 51/123 (41%), Positives = 71/123 (57%)

Query:   124 RPPTFNAREIYAAIVIQTAFRGYXXXXXXXXXKGLVKLQALVRGHNVRKQAKMTLRCMQA 183
             R   +  R + AAI+IQTAFRG          KG+VKLQALVRGHNVR++  +TL+ +QA
Sbjct:   102 RTSVYLKRHV-AAILIQTAFRGCLARTAVRALKGVVKLQALVRGHNVRRRTSITLQRVQA 160

Query:   184 LVRVQARVLDQRVKLSQDGSRKSTFSDT-NTTVWESRYLQDISDRRSMSREGSSIADDWD 242
             LVR+QA  LD R KL+     + ++S   +  +W           R+M RE  S ++  D
Sbjct:   161 LVRIQALALDHRKKLTTKLGDEISYSHAFSKQMW-----------RTMEREAHSESELED 209

Query:   243 ERP 245
             +RP
Sbjct:   210 KRP 212

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
 Identities = 101/370 (27%), Positives = 167/370 (45%)

Query:   121 RLIRPPTF--NAREIYAAIVIQTAFRGYXXXXXXXXXKGLVKLQALVRGHNVRKQAKMTL 178
             R   P  F   + E  AAI+IQT FRGY         +GLV+L+ L+ G  V++QA  TL
Sbjct:   101 RRATPTRFAGKSNEEAAAILIQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAANTL 160

Query:   179 RCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIA 238
             +CMQ L RVQ+++  +R+++S++   +           + + LQ    + +    G    
Sbjct:   161 KCMQTLSRVQSQIRARRIRMSEENQAR-----------QKQLLQ----KHAKELAGLKNG 205

Query:   239 DDWDERPHTIEEVKVMLQQRKEAALKRERTLSHAFS-QQMWRNGRSSSMGDADELE-DRP 296
             D+W++   + E+V+  L  + EA ++RER L++++S QQ W+N  +S  G+   ++   P
Sbjct:   206 DNWNDSIQSKEKVEANLLSKYEATMRRERALAYSYSHQQNWKN--NSKSGNPMFMDPSNP 263

Query:   297 ----KLLDRWMATKPWESKGRA-STDNRDHIKTVEIDTSQPYSYLAPNLRRIXXXXXXXX 351
                   L+RWMA +P ES  +  S  N D+  +V+   ++  +  A +L R         
Sbjct:   264 TWGWSWLERWMAGRPLESSEKEQSNSNNDNAASVKGSINR--NEAAKSLTRNGSTQPNTP 321

Query:   352 XXXXXXXXXRPA--SPSHRAHQNPSLHHSPVTPSPSKTRPIQVR----SASPRCPRDDRT 405
                      + +  SP   +  N S   S    S S    +  R    S +    RDD +
Sbjct:   322 SSARGTPRNKNSFFSPPTPSRLNQSSRKSNDDDSKSTISVLSERNRRHSIAGSSVRDDES 381

Query:   406 YNTSQTPSLRSNYYYTGNVHQQSRGGASSSGTLPNYMAATESAKAKARSQSAPRQRPSTP 465
                S  P+L S    T +   + +  +   GT       T+ A AK R  S P   P+ P
Sbjct:   382 LAGS--PALPSYMVPTKSARARLKPQSPLGGTTQENEGFTDKASAKKRL-SYPTS-PALP 437

Query:   466 ERDRVGSAKK 475
             +  R  +  K
Sbjct:   438 KPRRFSAPPK 447

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2181635 IQD11 "AT5G13460" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 49/145 (33%), Positives = 80/145 (55%)

Query:   132 EIYAAIVIQTAFRGYXXXXXXXXXKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARV 191
             E+ AA  IQTAFRG+         KG+VKLQA +RG  VR+QA  TL+C+Q++V +Q++V
Sbjct:   110 EVLAATRIQTAFRGHLARKALRALKGIVKLQAYIRGRAVRRQAMTTLKCLQSVVNIQSQV 169

Query:   192 LDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDERPHTIEEV 251
               +R ++   G     + ++N  ++    L+   D     R        WD+   T EE 
Sbjct:   170 CGKRTQIP--GGVHRDYEESN--IFNDNILK--VDTNGQKR--------WDDSLLTKEEK 215

Query:   252 KVMLQQRKEAALKRERTLSHAFSQQ 276
             + ++  +KEA+L+RER   +A + +
Sbjct:   216 EAVVMSKKEASLRRERIKEYAVTHR 240

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 5.8e-19, Sum P(3) = 5.8e-19
 Identities = 70/220 (31%), Positives = 109/220 (49%)

Query:   122 LIRPPTFNAREIYAAIVIQTAFRGYXXXXXXXXXKGLVKLQALVRGHNVRKQAKMTLRCM 181
             L R P  +  EI AAI IQTAFRGY         +GLV+L++LV+G  VR+QA  TL+ M
Sbjct:    98 LSRFPGKSMEEI-AAIKIQTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSM 156

Query:   182 QALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDW 241
             Q L RVQ ++ ++R++LS+D   K       T   + ++ +D  D+   +   S+++ + 
Sbjct:   157 QTLARVQYQIRERRLRLSED---KQAL----TRQLQQKHNKDF-DKTGENWNDSTLSREK 208

Query:   242 DERPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGR---SSSMGDADELEDRPKL 298
              E     ++V  M   R+E AL      SH   Q  W+N     S +  D +        
Sbjct:   209 VEANMLNKQVATM---RREKALAY--AFSH---QNTWKNSTKMGSQTFMDPNNPHWGWSW 260

Query:   299 LDRWMATKPWESKGRASTDNRDHIKTVEIDTSQPYSYLAP 338
             L+RWMA +P E+    + DN +   +     S+  S + P
Sbjct:   261 LERWMAARPNENHS-LTPDNAEKDSSARSVASRAMSEMIP 299

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00026156001 SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (494 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	544
pfam13178	105	pfam13178, DUF4005, Protein of unknown function (D	3e-23

>gnl|CDD|221960 pfam13178, DUF4005, Protein of unknown function (DUF4005)

 Score = 94.2 bits (234), Expect = 3e-23
 Identities = 47/112 (41%), Positives = 58/112 (51%), Gaps = 11/112 (9%)

Query: 395 ASPRCPRDDRTYNTSQTPSLRSNYYYTGNVHQQSRGGASSSGTLPNYMAATESAKAKARS 454
            +PR      + ++  +PS  +               ++SS +LPNYMAATESAKAK RS
Sbjct: 1   NTPRLLSSSSSKSSRSSPSNPTKSER-------DDNSSTSSPSLPNYMAATESAKAKVRS 53

Query: 455 QSAPRQRPSTPERDRVGSAKKRLSFPVPEPYGVAMGYGNHGQN----LRSPS 502
           QSAPRQRP T ER+   SA KRLS PV    G +             LRSPS
Sbjct: 54  QSAPRQRPETEERESGSSATKRLSLPVSSSSGGSSSSSPRTSGGKGALRSPS 105

This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins. Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	544
PF13178	102	DUF4005: Protein of unknown function (DUF4005)	99.66
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.74
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.3
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.13
KOG0520	975	consensus Uncharacterized conserved protein, conta	96.33
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	95.44
PTZ00014	821	myosin-A; Provisional	95.29
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	91.94
COG5022	1463	Myosin heavy chain [Cytoskeleton]	91.37
KOG2128	1401	consensus Ras GTPase-activating protein family - I	91.18
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	89.55
smart00015	26	IQ Short calmodulin-binding motif containing conse	85.68
PTZ00014	821	myosin-A; Provisional	82.78

>PF13178 DUF4005: Protein of unknown function (DUF4005)

Probab=99.66  E-value=1.3e-16  Score=140.52  Aligned_cols=65  Identities=63%  Similarity=0.795  Sum_probs=53.2

Q ss_pred             CCCccccchhhhhhhcccCCCCCCCCCCCCCccCCcccccccCCCCCCCCCC--CCC--CCCCCCCCCC
Q 009080          438 LPNYMAATESAKAKARSQSAPRQRPSTPERDRVGSAKKRLSFPVPEPYGVAM--GYG--NHGQNLRSPS  502 (544)
Q Consensus       438 ~PsYMa~T~SakAK~Rs~s~pkqr~~tpek~~~~s~KKRlS~p~~~~~~~~~--g~~--~~~~~~RSPs  502 (544)
                      +|||||+|||||||+|+||+||||+++++.+....++||+|||+.......+  +..  ...+.+||||
T Consensus        34 ~PsYMa~TeSakAK~RsqSaPrqR~~~~~~~~~~~~~kR~S~~~~~~~~~~~~~~~~~~~~~~~qrSps  102 (102)
T PF13178_consen   34 LPSYMAATESAKAKARSQSAPRQRPGTPERAEKQSSKKRLSLPGSSNSGSSSSRSPRTSSSSQSQRSPS  102 (102)
T ss_pred             CCCccchhhhhhhhhhccCCcccCCCccccccccccccccccCCCCCCCcCCCCCCccccccccCCCCC
Confidence            9999999999999999999999999988876566789999999865533332  222  3688999996

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.74  E-value=3.5e-05  Score=49.82  Aligned_cols=21  Identities=52%  Similarity=0.825  Sum_probs=19.0

Q ss_pred             HHHHHHHHHHhhhHHHHHHHH
Q 009080          133 IYAAIVIQTAFRGYLARRALR  153 (544)
Q Consensus       133 e~AAi~IQtafRGyLARralr  153 (544)
                      +.|||.||+.||||++|+.|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            368999999999999999885

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.30  E-value=0.00052  Score=79.73  Aligned_cols=66  Identities=27%  Similarity=0.339  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHHhh-hHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 009080          132 EIYAAIVIQTAFRGYLARRALRALK-GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQD  201 (544)
Q Consensus       132 ee~AAi~IQtafRGyLARralraLk-glVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~~  201 (544)
                      ...+++.||..||||+.|+.|..++ +++.||+++||.++|+.   ++ ...|++.+|..+|+...|+.|.
T Consensus       672 l~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~---~~-~~~aai~~q~~~r~~~~r~~y~  738 (862)
T KOG0160|consen  672 LSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRE---TE-REAAAIGIQKECRSYLNRRRYR  738 (862)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHh---hH-HHHHHHHhHHHHHHHHHHHHHH
Confidence            4467888999999999999999955 68888999999999992   22 6667777777777777777665

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.13  E-value=0.0004  Score=46.94  Aligned_cols=22  Identities=55%  Similarity=0.833  Sum_probs=19.9

Q ss_pred             HHHHHHHHHHHhhhHHHHHHHH
Q 009080          132 EIYAAIVIQTAFRGYLARRALR  153 (544)
Q Consensus       132 ee~AAi~IQtafRGyLARralr  153 (544)
                      .+.||+.||+.||||++|+.|+
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            5689999999999999999984

Calmodulin-binding motif.

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=96.33  E-value=0.0029  Score=74.15  Aligned_cols=72  Identities=28%  Similarity=0.324  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHHhhh-HHHHHHhhhhhhhhhhHHHHH-------HHHHHHHHHHHHHHHHHhhhhccCC
Q 009080          132 EIYAAIVIQTAFRGYLARRALRALKG-LVKLQALVRGHNVRKQAKMTL-------RCMQALVRVQARVLDQRVKLSQDGS  203 (544)
Q Consensus       132 ee~AAi~IQtafRGyLARralraLkg-lVrLQalvRG~~vRrqa~~tl-------r~mqA~v~iQs~iR~~r~R~s~~g~  203 (544)
                      ...||..||.-||||+.|+.+..++. +|+||+-|||++||+++....       +-+.++-++|+-+|+++.|...+..
T Consensus       809 ~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~  888 (975)
T KOG0520|consen  809 DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQ  888 (975)
T ss_pred             chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhcc
Confidence            34789999999999999999999775 999999999999999997332       2445666778888887777766544

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=95.44  E-value=0.042  Score=64.40  Aligned_cols=66  Identities=24%  Similarity=0.199  Sum_probs=56.8

Q ss_pred             hHHHHHHHHHHHHhhhHHHHHHHHHhhhHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009080          130 AREIYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKL  198 (544)
Q Consensus       130 ~~ee~AAi~IQtafRGyLARralraLkglVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~  198 (544)
                      ...-.+++.||+.+||+++|+........+.+|..+|+++.|+++   +....+++.+|+.+|+..+|.
T Consensus       693 ~~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y---~~~~~~~~~~qs~~r~~~~r~  758 (862)
T KOG0160|consen  693 LQLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRY---RALIPASITIQSGVRAMLARN  758 (862)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhcc
Confidence            456689999999999999998333455788899999999999999   566789999999999999998

>PTZ00014 myosin-A; Provisional

Probab=95.29  E-value=0.022  Score=66.78  Aligned_cols=40  Identities=28%  Similarity=0.372  Sum_probs=35.3

Q ss_pred             HHHHHHHHhhhHHHHHHHHH-hhhHHHHHHhhhhhhhhhhH
Q 009080          135 AAIVIQTAFRGYLARRALRA-LKGLVKLQALVRGHNVRKQA  174 (544)
Q Consensus       135 AAi~IQtafRGyLARralra-LkglVrLQalvRG~~vRrqa  174 (544)
                      .++.||+++|||++|+.|.. ..++++||+.+||+++++..
T Consensus       779 ~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            68899999999999999888 66899999999999998764

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=91.94  E-value=0.14  Score=32.95  Aligned_cols=19  Identities=32%  Similarity=0.368  Sum_probs=15.8

Q ss_pred             hhHHHHHHhhhhhhhhhhH
Q 009080          156 KGLVKLQALVRGHNVRKQA  174 (544)
Q Consensus       156 kglVrLQalvRG~~vRrqa  174 (544)
                      +++|.||+.+||+++|+++
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            4678889999999988876

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=91.37  E-value=0.4  Score=58.83  Aligned_cols=65  Identities=25%  Similarity=0.310  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHH-hhhHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009080          133 IYAAIVIQTAFRGYLARRALRA-LKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKL  198 (544)
Q Consensus       133 e~AAi~IQtafRGyLARralra-LkglVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~  198 (544)
                      ...|++||+++||++.||.+.+ ++.+..+|.+.+|..+++.....+. ....+++|..++...-|.
T Consensus       745 ~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~r~  810 (1463)
T COG5022         745 DNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELK-WRLFIKLQPLLSLLGSRK  810 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchH-HHhHHHhhHHhHHHhhHH
Confidence            4689999999999998888777 7888888888888888866643332 345566666666554443

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=91.18  E-value=0.44  Score=58.22  Aligned_cols=70  Identities=26%  Similarity=0.336  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHhhhHHH---HHHHH-H-hhhHHHHHHhhhhhhhhhhHHHHH----HHHHHHHHHHHHHHHHHhhhhcc
Q 009080          132 EIYAAIVIQTAFRGYLA---RRALR-A-LKGLVKLQALVRGHNVRKQAKMTL----RCMQALVRVQARVLDQRVKLSQD  201 (544)
Q Consensus       132 ee~AAi~IQtafRGyLA---Rralr-a-LkglVrLQalvRG~~vRrqa~~tl----r~mqA~v~iQs~iR~~r~R~s~~  201 (544)
                      ..-..+.||.+.|||+.   +..+. . ++-||++|++.||+++|+.+...+    .||...+.||+-+|.+..|..+.
T Consensus       564 ~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~~y~  642 (1401)
T KOG2128|consen  564 QTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRKDYK  642 (1401)
T ss_pred             cCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccchHHH
Confidence            44567889999999994   22222 2 778999999999999999987443    69999999999999999998876

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=89.55  E-value=0.8  Score=53.02  Aligned_cols=58  Identities=21%  Similarity=0.305  Sum_probs=41.5

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHhhhHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 009080          134 YAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQD  201 (544)
Q Consensus       134 ~AAi~IQtafRGyLARralraLkglVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~~  201 (544)
                      .-|+.||+++||+++|..|+.++....|=...|.+.++          ..+..||.++|+.+.++.|.
T Consensus       697 ~lvtllQK~~RG~~~R~ry~rmka~~~ii~wyR~~K~k----------s~v~el~~~~rg~k~~r~yg  754 (1001)
T KOG0164|consen  697 SLVTLLQKAWRGWLARQRYRRMKASATIIRWYRRYKLK----------SYVQELQRRFRGAKQMRDYG  754 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHhhhhccccC
Confidence            45789999999999999999987654432244533332          23456888999988877664

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=85.68  E-value=0.68  Score=31.18  Aligned_cols=19  Identities=32%  Similarity=0.361  Sum_probs=15.4

Q ss_pred             hhHHHHHHhhhhhhhhhhH
Q 009080          156 KGLVKLQALVRGHNVRKQA  174 (544)
Q Consensus       156 kglVrLQalvRG~~vRrqa  174 (544)
                      +.++.||+.+||+++|+++
T Consensus         4 ~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        4 RAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            4678888888888888876

Calmodulin-binding motif.

>PTZ00014 myosin-A; Provisional

Probab=82.78  E-value=2.6  Score=49.90  Aligned_cols=40  Identities=23%  Similarity=0.283  Sum_probs=34.4

Q ss_pred             hHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 009080          157 GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLS  199 (544)
Q Consensus       157 glVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s  199 (544)
                      -++.||+.+||++.|+.+   ++..++++.||+.+|++..++.
T Consensus       779 ~~~~iq~~~r~~~~r~~~---~~~~~~~~~iQ~~~R~~l~~~~  818 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKV---RKNIKSLVRIQAHLRRHLVIAE  818 (821)
T ss_pred             HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc
Confidence            356789999999999998   5558899999999999888754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	544
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	6e-07
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-06
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	8e-06
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	7e-05
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	3e-05
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	4e-05
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	1e-04
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	2e-04
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	5e-04

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 135 AAIVIQTAFRGYLARRA-LRALKGLVKLQALVRGHNVRKQAKMTLRCMQA 183
           A I IQ   RG+L R+  L   +  + +Q  VRG+  R  AK  LR  +A
Sbjct: 7   ACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK-FLRRTKA 55

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 49.7 bits (119), Expect = 2e-06
 Identities = 30/165 (18%), Positives = 56/165 (33%), Gaps = 20/165 (12%)

Query: 114 HAAAEVARLIRPPTFNAREIY-----AAIVIQTAFRGYLARR---ALRALKGLVKLQALV 165
            A   + + IR   +  R+ Y     AAI IQ   RG+ AR     LR  +  + +Q   
Sbjct: 769 AACIRIQKTIR--GWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQ 826

Query: 166 RGHNVRKQAKMT----------LRCMQALVRVQARVLDQRVKLSQDGSRKSTFSDTNTTV 215
           R + VRK+ +            LR      + Q  + + +  + Q   R           
Sbjct: 827 RMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRT 886

Query: 216 WESRYLQDISDRRSMSREGSSIADDWDERPHTIEEVKVMLQQRKE 260
            ++        RR M++                +++ + L+ +  
Sbjct: 887 LKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIM 931

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 47.7 bits (114), Expect = 8e-06
 Identities = 18/227 (7%), Positives = 63/227 (27%), Gaps = 9/227 (3%)

Query: 137 IVIQTAFRGYLARRA----LRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQA--R 190
                  +    ++A          +  +Q+ +  H   K+ +      Q +  ++A   
Sbjct: 765 KRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTE-KPPKGQEVSELEAIYN 823

Query: 191 VLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDERPHTIEE 250
            L  +++L +     +    T   +  +    + +  +  +           +    +++
Sbjct: 824 SLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKA-EQEHAEALRIELKRQKKIAVLLQK 882

Query: 251 VKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDRPKLLDRWMATKP-WE 309
              +L++ +  A  +   L    +       ++          +   L  +  +      
Sbjct: 883 YNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSIL 942

Query: 310 SKGRASTDNRDHIKTVEIDTSQPYSYLAPNLRRINHQNQYHQHQQQH 356
           ++      N     T   DT     +         ++N      ++ 
Sbjct: 943 AQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERL 989

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 44.7 bits (106), Expect = 7e-05
 Identities = 4/67 (5%), Positives = 18/67 (26%), Gaps = 3/67 (4%)

Query: 135 AAIVIQTAFRGYLARRALRAL---KGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARV 191
           +   +Q+    +   +        + + +L+A+      + +       +         +
Sbjct: 789 SIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEI 848

Query: 192 LDQRVKL 198
                 L
Sbjct: 849 DSTWSAL 855

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 46.2 bits (110), Expect = 3e-05
 Identities = 21/247 (8%), Positives = 57/247 (23%), Gaps = 26/247 (10%)

Query: 135  AAIVIQTAFRGYLARRALRALK----------GLVKLQALVRGHNVRKQAKMTLRCMQAL 184
                     R     + +   +           +  +Q+ +  H   K+ +      Q +
Sbjct: 765  EQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTE-KPPKGQEV 823

Query: 185  VRVQARVLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDI-SDRRSMSREGSSIADDWDE 243
              ++A     + KL              T          +    +  +           +
Sbjct: 824  SELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKK 883

Query: 244  RPHTIEEVKVMLQQRKEAALKRERTLSHAFSQQMWRNGRSSSMGDADELEDRPKLLDRWM 303
                +++   +L++ +  A  +   L    +       ++          +   L  +  
Sbjct: 884  IAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSN 943

Query: 304  AT-KPWESKGRASTDNRDH-------------IKTVEIDTSQPYSYLAPNLRRINHQNQY 349
            +      ++      N                   V+       + L   L R+      
Sbjct: 944  SDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIEDL 1003

Query: 350  HQHQQQH 356
            H H   H
Sbjct: 1004 HHHHHHH 1010

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 45.4 bits (108), Expect = 4e-05
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 135 AAIVIQTAFRGYLARRALRALK----GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQA 189
              + Q   RGYL R+A + L+    GL  +Q  +R   V +  +      +   +V+ 
Sbjct: 781 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQW----WKLYSKVKP 835

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 38/165 (23%), Positives = 55/165 (33%), Gaps = 21/165 (12%)

Query: 329  TSQPYSYLAPNLRRIN--HQNQYHQHQQQHGQYQRPASPSHRAHQNPSLHHSPVTPSPSK 386
            TS  YS  +P+    +  +      +      Y  P SPS+      S  +SP +PS S 
Sbjct: 1573 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPT---SPSYSPTSPSYSP 1628

Query: 387  TRPIQVRSASPRCPRDDRTYNTSQTPSLRSNYY-------------YTGNVHQQSRGGAS 433
            T P    ++    P       TS + S  S  Y             Y+      S    S
Sbjct: 1629 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1688

Query: 434  SSGTLPNYMAA--TESAKAKARSQSAPRQRPSTPERDRVGSAKKR 476
             S T PNY     + S  +   S  +P   P   E+    +   R
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENSR 1733

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 41.7 bits (97), Expect = 2e-04
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 12/78 (15%)

Query: 18  RSPTKESEKKSSRQRREEHD---QEDDDEKKREKRRWLFRKTTNQETVAQQQTSTKERSS 74
           ++     E +S R+ REE     QE D   K  ++ W  +   + E   Q+Q+   E++ 
Sbjct: 76  QADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNK 135

Query: 75  AHHVTGSTSQADRAAEEH 92
            +         +R A++ 
Sbjct: 136 IN---------NRIADKA 144

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 42.1 bits (99), Expect = 5e-04
 Identities = 17/149 (11%), Positives = 45/149 (30%), Gaps = 11/149 (7%)

Query: 135 AAIVIQTAFRGYLARRALRALK----GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQAR 190
             I  Q   RGYLAR+A    +     +  +Q  VR                    ++  
Sbjct: 794 VIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWPWMXLFFXIXPLLKVT 853

Query: 191 VLDQRVKLSQDGSRKSTFSDTNTTVWESRYLQDISDRRSMSREGSSIADDWDERPHTIEE 250
             ++ ++     ++      T     ++    ++ +      +     +   E+     E
Sbjct: 854 RQEEEMQ-----AKDEELQRTKERQQKAE--AELKELEQKHTQLCEEKNLLQEKLQAETE 906

Query: 251 VKVMLQQRKEAALKRERTLSHAFSQQMWR 279
           +    ++ +     +++ L     +   R
Sbjct: 907 LYAEAEEMRVRLAAKKQELEEILHEMEAR 935

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	544
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	98.93
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.61
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.5
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.47
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	97.84
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	97.8
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.7
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	97.01
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.74
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.66
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	96.43
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	96.4
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	96.18
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	95.57
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	94.42
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	91.55
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	91.24
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	87.16
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	83.38

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=98.93  E-value=1.8e-09  Score=84.24  Aligned_cols=53  Identities=32%  Similarity=0.400  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhh-hHHHHHHhhhhhhhhhhHHHHHHHHHHH
Q 009080          131 REIYAAIVIQTAFRGYLARRALRALK-GLVKLQALVRGHNVRKQAKMTLRCMQAL  184 (544)
Q Consensus       131 ~ee~AAi~IQtafRGyLARralraLk-glVrLQalvRG~~vRrqa~~tlr~mqA~  184 (544)
                      +.+.|||.||+.||||++|+.|..++ ++|.||+.+||+++|+.+ ..++...|+
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~~r~~~aA   56 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYA-KFLRRTKAA   56 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCc
Confidence            56789999999999999999999976 899999999999999999 445555554

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.61  E-value=5.1e-08  Score=73.07  Aligned_cols=41  Identities=27%  Similarity=0.415  Sum_probs=36.2

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHhh---hHHHHHHhhhhhhhhhhH
Q 009080          134 YAAIVIQTAFRGYLARRALRALK---GLVKLQALVRGHNVRKQA  174 (544)
Q Consensus       134 ~AAi~IQtafRGyLARralraLk---glVrLQalvRG~~vRrqa  174 (544)
                      .|||.||+.+||||+|+.+..++   ..|.||+.+||+.+|+.+
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            48999999999999999998854   788899999999998865

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.50  E-value=1.6e-07  Score=109.59  Aligned_cols=72  Identities=26%  Similarity=0.327  Sum_probs=60.8

Q ss_pred             hHHHHHHHHHHHHhhhHHHHHHHHHhh-hHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 009080          130 AREIYAAIVIQTAFRGYLARRALRALK-GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQDG  202 (544)
Q Consensus       130 ~~ee~AAi~IQtafRGyLARralraLk-glVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~~g  202 (544)
                      .+++.||++||+.||||++|+.|..++ ++|.||+.+||+++|+++ ..++...+++.||+.+|++..|+.|..
T Consensus       813 lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~-~~lr~~~aav~IQ~~~Rg~l~R~~y~~  885 (1080)
T 2dfs_A          813 LRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKY-QMMLREHKSIIIQKHVRGWLARVHYHR  885 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTTTHHHHHTTT
T ss_pred             cccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            467899999999999999999999955 799999999999999998 445566778888888888888777653

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.47  E-value=2.7e-07  Score=107.68  Aligned_cols=68  Identities=29%  Similarity=0.346  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHHhh-hHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 009080          133 IYAAIVIQTAFRGYLARRALRALK-GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQD  201 (544)
Q Consensus       133 e~AAi~IQtafRGyLARralraLk-glVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~~  201 (544)
                      ..||+.||++||||++|+.|+.++ +++.||+.+||+++|+.+ ..++...|++.||+.+|++.+|+.|.
T Consensus       768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~Rk~y~  836 (1080)
T 2dfs_A          768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVRKRYQ  836 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHHHHHH
Confidence            579999999999999999999955 799999999999999998 56788999999999999999999876

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=97.84  E-value=7.8e-06  Score=57.26  Aligned_cols=24  Identities=46%  Similarity=0.607  Sum_probs=21.5

Q ss_pred             hHHHHHHHHHHHHhhhHHHHHHHH
Q 009080          130 AREIYAAIVIQTAFRGYLARRALR  153 (544)
Q Consensus       130 ~~ee~AAi~IQtafRGyLARralr  153 (544)
                      .+||.||+.||.|||+||.|+.+.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~rr~~~   26 (31)
T 2l53_B            3 GSEEVSAMVIQRAFRRHLLQRSLK   26 (31)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc
Confidence            369999999999999999998764

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=97.80  E-value=3.5e-05  Score=57.47  Aligned_cols=44  Identities=14%  Similarity=0.175  Sum_probs=39.0

Q ss_pred             hhHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009080          156 KGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQ  200 (544)
Q Consensus       156 kglVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~  200 (544)
                      +.+|.||+.+||+++|+++ ..++...|++.||+.+|++.+|+.|
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            4789999999999999999 5566778999999999999998764

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.70  E-value=1.6e-05  Score=54.02  Aligned_cols=22  Identities=45%  Similarity=0.665  Sum_probs=19.8

Q ss_pred             hHHHHHHHHHHHHhhhHHHHHH
Q 009080          130 AREIYAAIVIQTAFRGYLARRA  151 (544)
Q Consensus       130 ~~ee~AAi~IQtafRGyLARra  151 (544)
                      .+||.||+.||.|||+||+|+.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~~~~   24 (27)
T 2kxw_B            3 KQEEVSAIVIQRAYRRYLLKQK   24 (27)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh
Confidence            3689999999999999999865

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=97.01  E-value=0.00088  Score=51.79  Aligned_cols=43  Identities=23%  Similarity=0.294  Sum_probs=37.7

Q ss_pred             hhHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 009080          156 KGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQD  201 (544)
Q Consensus       156 kglVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~~  201 (544)
                      ..+|.||+.+||+++|+.+   ++...+++.||+.+|++.+|+.+.
T Consensus         6 ~aai~IQ~~~Rg~~~Rk~~---~~~r~aai~IQ~~~Rg~~aR~~~~   48 (58)
T 2ix7_C            6 AACIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQARCYAK   48 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999   444579999999999999998764

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.74  E-value=0.0021  Score=50.82  Aligned_cols=39  Identities=33%  Similarity=0.458  Sum_probs=20.2

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHh----hhHHHHHHhhhhhhhhh
Q 009080          134 YAAIVIQTAFRGYLARRALRAL----KGLVKLQALVRGHNVRK  172 (544)
Q Consensus       134 ~AAi~IQtafRGyLARralraL----kglVrLQalvRG~~vRr  172 (544)
                      ..++.||+..||||+|+.|..+    .++..||.-+|+++.++
T Consensus         7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~   49 (64)
T 1wdc_A            7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR   49 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3455666666666666655552    23334455555444444

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.66  E-value=0.002  Score=50.83  Aligned_cols=41  Identities=17%  Similarity=0.026  Sum_probs=20.1

Q ss_pred             HHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 009080          158 LVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKL  198 (544)
Q Consensus       158 lVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~  198 (544)
                      ++.||+.+||+++|+.+...+....|+..||.-+|++..++
T Consensus         7 ~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr   47 (63)
T 2bl0_A            7 VKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK   47 (63)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            34444444444444444444444445555555555555544

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=96.43  E-value=0.0051  Score=48.59  Aligned_cols=44  Identities=23%  Similarity=0.095  Sum_probs=39.6

Q ss_pred             hHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009080          157 GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQ  200 (544)
Q Consensus       157 glVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~  200 (544)
                      -++.|||.+||+++|+.+...+....|+..||.-+|++..++..
T Consensus         8 i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w   51 (64)
T 1wdc_A            8 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW   51 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            48889999999999999998888899999999999999887654

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=96.40  E-value=0.0047  Score=48.70  Aligned_cols=41  Identities=24%  Similarity=0.225  Sum_probs=35.8

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHh----hhHHHHHHhhhhhhhhhhH
Q 009080          134 YAAIVIQTAFRGYLARRALRAL----KGLVKLQALVRGHNVRKQA  174 (544)
Q Consensus       134 ~AAi~IQtafRGyLARralraL----kglVrLQalvRG~~vRrqa  174 (544)
                      ..++.||+..||||+|+.|..+    .++..||.-+|+++.++.-
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w   49 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW   49 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            5689999999999999999985    4677889999999998765

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=96.18  E-value=0.0066  Score=69.49  Aligned_cols=41  Identities=32%  Similarity=0.413  Sum_probs=34.7

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHh----hhHHHHHHhhhhhhhhhhH
Q 009080          134 YAAIVIQTAFRGYLARRALRAL----KGLVKLQALVRGHNVRKQA  174 (544)
Q Consensus       134 ~AAi~IQtafRGyLARralraL----kglVrLQalvRG~~vRrqa  174 (544)
                      .+|+.||+++||||+|+.|+.+    .+++.||..+||+++||..
T Consensus       780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            5789999999999999999885    4678888888888888776

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=95.57  E-value=0.013  Score=54.40  Aligned_cols=36  Identities=31%  Similarity=0.452  Sum_probs=31.1

Q ss_pred             hHHHHHHHHHHHHhhhHHHHHHHHH-hhhHHHHHHhh
Q 009080          130 AREIYAAIVIQTAFRGYLARRALRA-LKGLVKLQALV  165 (544)
Q Consensus       130 ~~ee~AAi~IQtafRGyLARralra-LkglVrLQalv  165 (544)
                      .-+..|+|+||++.||||+|+.++- +.|++++.+|.
T Consensus        42 ~yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~   78 (148)
T 3gn4_A           42 KYRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK   78 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            3467899999999999999999988 78998887764

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=94.42  E-value=0.033  Score=65.69  Aligned_cols=41  Identities=29%  Similarity=0.318  Sum_probs=37.1

Q ss_pred             HHHHHHHHHhhhHHHHHHHHHh----hhHHHHHHhhhhhhhhhhH
Q 009080          134 YAAIVIQTAFRGYLARRALRAL----KGLVKLQALVRGHNVRKQA  174 (544)
Q Consensus       134 ~AAi~IQtafRGyLARralraL----kglVrLQalvRG~~vRrqa  174 (544)
                      .+|+.||+.+||||+|+.|..+    .+++.||..+||++.+|..
T Consensus       793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            6789999999999999999985    4899999999999999864

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=91.55  E-value=0.28  Score=56.26  Aligned_cols=45  Identities=22%  Similarity=0.100  Sum_probs=39.5

Q ss_pred             hHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 009080          157 GLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQD  201 (544)
Q Consensus       157 glVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~~  201 (544)
                      -++.||+.+||+++|+.+...+....|++.||..+|++..|+.+.
T Consensus       781 ~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~  825 (837)
T 1kk8_A          781 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ  825 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence            478899999999999999776667789999999999999987653

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=91.24  E-value=0.14  Score=48.31  Aligned_cols=25  Identities=44%  Similarity=0.571  Sum_probs=22.7

Q ss_pred             hHHHHHHHHHHHHhhhHHHHHHHHH
Q 009080          130 AREIYAAIVIQTAFRGYLARRALRA  154 (544)
Q Consensus       130 ~~ee~AAi~IQtafRGyLARralra  154 (544)
                      ..|+.||+.||.|||.|+.|+.+..
T Consensus       127 ~~e~~aA~~IQra~R~~~~r~~~~~  151 (168)
T 4dck_A          127 KHEEVSAMVIQRAFRRHLLQRSLKH  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccc
Confidence            5789999999999999999988776

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=87.16  E-value=0.96  Score=53.40  Aligned_cols=45  Identities=18%  Similarity=0.118  Sum_probs=39.3

Q ss_pred             hhHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009080          156 KGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQ  200 (544)
Q Consensus       156 kglVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~  200 (544)
                      .-++.||+.+||+++|+.+...+....|++.||+.+|++..++.+
T Consensus       793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            357889999999999999977777788999999999999888754

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=83.38  E-value=0.74  Score=52.55  Aligned_cols=25  Identities=32%  Similarity=0.489  Sum_probs=22.0

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHHhhh
Q 009080          133 IYAAIVIQTAFRGYLARRALRALKG  157 (544)
Q Consensus       133 e~AAi~IQtafRGyLARralraLkg  157 (544)
                      ..+|+.||+++||||+|+.|+.++.
T Consensus       768 ~~~~~~iQ~~~Rg~l~R~~~~~~r~  792 (795)
T 1w7j_A          768 RAACIRIQKTIRGWLMRKKYMRMRR  792 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3589999999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	544
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	1e-04
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	9e-04
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	1e-04

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 42.8 bits (100), Expect = 1e-04
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 8/59 (13%)

Query: 135 AAIVIQTAFRGYLARRALRAL----KGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQA 189
                Q   RG+L R   RA+    + +  +Q  VR     K        M+   +++ 
Sbjct: 737 IITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPW----MKLFFKIKP 791

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 39.7 bits (92), Expect = 9e-04
 Identities = 6/32 (18%), Positives = 15/32 (46%)

Query: 135 AAIVIQTAFRGYLARRALRALKGLVKLQALVR 166
           +   IQ   R ++  +    +K   K++ L++
Sbjct: 763 SIFCIQYNVRSFMNVKHWPWMKLFFKIKPLLK 794

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 42.4 bits (99), Expect = 1e-04
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 4/45 (8%)

Query: 135 AAIVIQTAFRGYLARRALRALK----GLVKLQALVRGHNVRKQAK 175
              + Q   RGYL R+A + L+    GL  +Q  +R   V +  +
Sbjct: 733 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ 777

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	544
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	96.77
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	96.74
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	93.45
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	90.82
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	87.71

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=96.77  E-value=0.00081  Score=73.64  Aligned_cols=42  Identities=31%  Similarity=0.417  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHHhh----hHHHHHHhhhhhhhhhhH
Q 009080          133 IYAAIVIQTAFRGYLARRALRALK----GLVKLQALVRGHNVRKQA  174 (544)
Q Consensus       133 e~AAi~IQtafRGyLARralraLk----glVrLQalvRG~~vRrqa  174 (544)
                      ..+|+.||+.||||++|+.|+.+|    .++.||..+||+++||.+
T Consensus       731 ~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         731 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            468999999999999999999876    678889999999888876

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=96.74  E-value=0.00078  Score=73.84  Aligned_cols=42  Identities=26%  Similarity=0.262  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHHh----hhHHHHHHhhhhhhhhhhH
Q 009080          133 IYAAIVIQTAFRGYLARRALRAL----KGLVKLQALVRGHNVRKQA  174 (544)
Q Consensus       133 e~AAi~IQtafRGyLARralraL----kglVrLQalvRG~~vRrqa  174 (544)
                      ..+|+.||+.+|||++|+.|+.+    +.++.||+.+||+++||..
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            46899999999999999999774    3788899999999998886

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=93.45  E-value=0.052  Score=59.01  Aligned_cols=45  Identities=16%  Similarity=0.066  Sum_probs=40.1

Q ss_pred             hhHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 009080          156 KGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQ  200 (544)
Q Consensus       156 kglVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~  200 (544)
                      +.++.||+.+||+++|+++...+....|++.||+.+|++..|+.|
T Consensus       736 ~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         736 EIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            457899999999999999987777778999999999999998765

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=90.82  E-value=0.17  Score=54.77  Aligned_cols=46  Identities=24%  Similarity=0.121  Sum_probs=38.3

Q ss_pred             hhHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 009080          156 KGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRVKLSQD  201 (544)
Q Consensus       156 kglVrLQalvRG~~vRrqa~~tlr~mqA~v~iQs~iR~~r~R~s~~  201 (544)
                      +.++.||+.+||+++|+++........+++.||+.+|++.+|+.|.
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~  777 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ  777 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence            3577889999999999999655455568999999999999998763

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=87.71  E-value=0.16  Score=54.40  Aligned_cols=24  Identities=33%  Similarity=0.523  Sum_probs=21.0

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHHhh
Q 009080          133 IYAAIVIQTAFRGYLARRALRALK  156 (544)
Q Consensus       133 e~AAi~IQtafRGyLARralraLk  156 (544)
                      ..+||+||+.+||||+||.|..+|
T Consensus       706 ~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         706 RAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            458999999999999999998765