Citrus Sinensis ID: 009127
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 543 | 2.2.26 [Sep-21-2011] | |||||||
| P29162 | 554 | L-ascorbate oxidase homol | N/A | no | 0.968 | 0.949 | 0.518 | 1e-161 | |
| Q00624 | 555 | L-ascorbate oxidase homol | N/A | no | 0.941 | 0.920 | 0.541 | 1e-159 | |
| Q9SU40 | 587 | Monocopper oxidase-like p | no | no | 0.968 | 0.896 | 0.499 | 1e-150 | |
| Q8VXX5 | 589 | Monocopper oxidase-like p | no | no | 0.970 | 0.894 | 0.489 | 1e-142 | |
| Q9FHN6 | 592 | Monocopper oxidase-like p | no | no | 0.939 | 0.861 | 0.487 | 1e-142 | |
| Q0IQU1 | 564 | Laccase-22 OS=Oryza sativ | no | no | 0.955 | 0.920 | 0.278 | 9e-47 | |
| P24792 | 579 | L-ascorbate oxidase OS=Cu | N/A | no | 0.902 | 0.846 | 0.272 | 2e-44 | |
| Q8RYM9 | 562 | Laccase-2 OS=Oryza sativa | no | no | 0.913 | 0.882 | 0.271 | 3e-44 | |
| Q1PDH6 | 566 | Laccase-16 OS=Arabidopsis | no | no | 0.872 | 0.837 | 0.287 | 4e-44 | |
| P37064 | 552 | L-ascorbate oxidase OS=Cu | N/A | no | 0.902 | 0.887 | 0.272 | 1e-43 |
| >sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 570 bits (1469), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/542 (51%), Positives = 366/542 (67%), Gaps = 16/542 (2%)
Query: 9 SLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDN 68
+ +ALLL L+V GV + PY +F W +TYG I PLGV QQGILINGQFPGP+I+ +N+N
Sbjct: 7 TFVALLLCLSV-GVIAEDPYLYFNWNVTYGTIAPLGVPQQGILINGQFPGPRINCTSNNN 65
Query: 69 LIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYF 128
++++V+N L EPFL +WNG+Q R+NSWQDG GT CPI PG+NFTY Q KDQIGSY YF
Sbjct: 66 IVVNVFNNLDEPFLFTWNGVQHRKNSWQDGTPGTMCPIMPGQNFTYRFQVKDQIGSYSYF 125
Query: 129 PSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLP 188
P+ H+AAG +G + + SR IPVPF PA ++ V GDWY H L+++LD G +
Sbjct: 126 PTTALHRAAGGYGALNVHSRALIPVPFDNPADEYNVFVGDWYNKGHKTLKKILDGGRTIG 185
Query: 189 FPDGLLINGRG-----WNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGS 243
PDG++ING+ FT+E G+TYR+R N+G+ +S+N R QGH MKLVE+EGS
Sbjct: 186 RPDGIIINGKSAKVGEAKEPLFTMEAGKTYRYRFCNLGMRSSVNIRFQGHPMKLVELEGS 245
Query: 244 HTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVS 303
HT+QN Y +LD+H+GQ SVLVT DQ P+DYY+VVSSRF + L++ AI+ Y+N + S
Sbjct: 246 HTVQNIYDSLDLHVGQCLSVLVTADQEPKDYYLVVSSRFLKQALSSVAIIRYANGKGPAS 305
Query: 304 GPIPGGP---TTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPY 360
+P P T IAWS+NQ RS RWNLTAS RPNPQGSYHYG I I+RTI + NS
Sbjct: 306 PELPTPPPENTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKIFNSMSQ 365
Query: 361 MNGKQRYAINSVSFVPADTPLKLADYFKIPGV-----FTLGSMPTSPNWGNAYLQTSVMA 415
+ GK RY +N +S +TPLKL +YF P P+ + T+V
Sbjct: 366 VGGKLRYGLNGISHTNGETPLKLVEYFGATNKAFKYDLMADEAPADPS--KLTIATNVKN 423
Query: 416 ANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVY 475
A +R FVEI+F+N E T+++YH+DGYSFF V ++ G+W+P R YNL D ++R+ QVY
Sbjct: 424 ATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGRWSPEKRKNYNLVDGLSRNNIQVY 483
Query: 476 PRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRA 535
P SW AI + DN GMWN+RSE W + YLG+Q Y V SP+ S RDE IP N LCG
Sbjct: 484 PNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPDNHPLCGIV 543
Query: 536 RG 537
+G
Sbjct: 544 KG 545
|
Probable oxidoreductase that may be involved in pollen tube growth. Nicotiana tabacum (taxid: 4097) EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: - |
| >sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 282/521 (54%), Positives = 358/521 (68%), Gaps = 10/521 (1%)
Query: 25 DSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLIS 84
+ PY W +TYG PLGV QQ ILINGQFPGP I++ +N+N+II+V+N L EPFL++
Sbjct: 24 EDPYFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLT 83
Query: 85 WNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIR 144
WNG+Q R+N WQDG GT CPI PG N+TY Q KDQIGSYFY+P+ H+AAG +GG+R
Sbjct: 84 WNGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPTTGMHRAAGGYGGLR 143
Query: 145 IWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGR-----G 199
+ SR IPVP+ P D+TVL GDWY +H L++ LD G + PDG++ING+ G
Sbjct: 144 VNSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDGGRTIGRPDGIVINGKSGKGDG 203
Query: 200 WNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQ 259
+ FT++PG+TYR RI NVG+ TSINFRIQ H MKLVE+EGSH LQN Y +LD+H+GQ
Sbjct: 204 SDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQ 263
Query: 260 TYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLN 319
+ +VT +Q P+DYY+V SSRF V+TTT +L Y + S +P GP AWSLN
Sbjct: 264 CFGTIVTANQEPKDYYMVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGPVG-WAWSLN 322
Query: 320 QARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADT 379
Q RS RWNLTAS RPNPQGSYHYG I I+RTI L N+ ++GK R+A+N VS +T
Sbjct: 323 QFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHTEPET 382
Query: 380 PLKLADYFKIPG-VF---TLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQS 435
PLKLA+YF I VF T+ PT N ++ +V+ R FVE+VF+N E +VQS
Sbjct: 383 PLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQS 442
Query: 436 YHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIR 495
+H+DGYSFF V ++ G WTP R YNL D V+R T QVYP+ W AI + DN GMWN+R
Sbjct: 443 WHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVR 502
Query: 496 SENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRAR 536
SEN R+YLGQQ Y V SP S RDE +P+ +L CG +
Sbjct: 503 SENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVK 543
|
Probable oxidase that may be involved in pollen tube growth. Brassica napus (taxid: 3708) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: - |
| >sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/547 (49%), Positives = 357/547 (65%), Gaps = 21/547 (3%)
Query: 7 LCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTN 66
L ++ L+ + + + PY F+ ++++Y PLGV QQ I ING+FPGP I+ TN
Sbjct: 3 LFKILLLVFFVNISFCFAADPYSFYNFEVSYITASPLGVPQQVIAINGKFPGPTINVTTN 62
Query: 67 DNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYF 126
+NL+++V N L E L+ WNG+QQRR SWQDGV GT CPIPP N+TY Q KDQIGS+F
Sbjct: 63 ENLVVNVRNKLDEGLLLHWNGIQQRRVSWQDGVLGTNCPIPPKWNWTYEFQVKDQIGSFF 122
Query: 127 YFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHN 186
YFPS F +A+G FG + R IPVPF P GD TV GDWY NH LR+ LD G +
Sbjct: 123 YFPSLHFQRASGGFGSFVVNPRAIIPVPFSTPDGDITVTIGDWYIRNHTALRKALDDGKD 182
Query: 187 LPFPDGLLINGRGWNGY------------TFTVEPGRTYRFRISNVGLTTSINFRIQGHS 234
L PDG+LING+G Y T TV PG+TYR R+SNVG++TS+NFRIQGH+
Sbjct: 183 LGMPDGVLINGKGPYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHN 242
Query: 235 MKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ-APQDYYIVVSSRFTP----RVLTT 289
+ L E EGS+T+Q Y +LDIH+GQ+YS LVTMDQ A DYYIV S+R R +T
Sbjct: 243 LVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTG 302
Query: 290 TAILHYSNSRRGVSGPIPGGPTTEI--AWSLNQARSIRWNLTASGPRPNPQGSYHYGMIK 347
IL Y+NS+ G +P GP E +S+NQARSIRWN++ASG RPNPQGS+ YG I
Sbjct: 303 VGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSIN 362
Query: 348 ISRTITLANSAPY-MNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGN 406
++ L N P ++GK+R +N +SF TP++LAD K+ V+ L P P G
Sbjct: 363 VTDVYVLRNMPPVTISGKRRTTLNGISFKNPSTPIRLADKLKVKDVYKL-DFPKRPLTGP 421
Query: 407 AYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDT 466
A + TS++ +R F+E+V QN + +QSYH+ GY+FFVVGMD G+WT SR YN D
Sbjct: 422 AKVATSIINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDG 481
Query: 467 VARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIP 526
+ARST QVYP +W+AI ++LDN G WN+R+EN YLGQ+ Y+RV +P + + E P
Sbjct: 482 IARSTIQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHP 541
Query: 527 KNALLCG 533
N L CG
Sbjct: 542 DNVLYCG 548
|
May be a monocopper oxidase of unknown specificity. Involved in directional growth processes, possibly by participating in cell wall expansion. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 270/552 (48%), Positives = 362/552 (65%), Gaps = 25/552 (4%)
Query: 8 CSLIA---LLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAV 64
CSL+A L +L + P+ + ++++Y PLGV QQ I +NGQFPGP ++A
Sbjct: 5 CSLLASFLLCFALLSAVSFAADPFVSYDFRVSYLTASPLGVPQQVIAVNGQFPGPLLNAT 64
Query: 65 TNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGS 124
TN N++++V+N+L EP L++W G+Q RRNSWQDGV GT CPIPP NFTY Q KDQIGS
Sbjct: 65 TNYNVVVNVFNHLDEPLLLTWPGIQMRRNSWQDGVLGTNCPIPPRWNFTYQFQVKDQIGS 124
Query: 125 YFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSG 184
+FY PS F +A+G FG I I +R IP+PFP P G+ + GDWY +H LRR LDSG
Sbjct: 125 FFYSPSLNFQRASGGFGPIVINNRDIIPIPFPQPDGELIFIIGDWYTQDHKALRRALDSG 184
Query: 185 HNLPFPDGLLINGRGWNGY-----------TFTVEPGRTYRFRISNVGLTTSINFRIQGH 233
L PDG+LING+G Y TF VEPG+TYR R+ NVG++TS+NFRIQ H
Sbjct: 185 KELGMPDGVLINGKGPYKYNSSVPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQNH 244
Query: 234 SMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ-APQDYYIVVSSRFTPRV----LT 288
S+ LVE EG +T Q + D+H+GQ+YS LVTMDQ A DYYIV S+RF +T
Sbjct: 245 SLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRVT 304
Query: 289 TTAILHYSNSRRGVSGPIPGGPTTEIA--WS-LNQARSIRWNLTASGPRPNPQGSYHYGM 345
AILHYSNS+ VSGP+P P T+++ WS ++Q ++IR N +ASG RPNPQGS+HYG
Sbjct: 305 GVAILHYSNSKGPVSGPLP-VPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQ 363
Query: 346 IKISRTITLANSAP-YMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNW 404
I I+ T L + P +NG R +N +SFV TP++LAD K+ G + L P P
Sbjct: 364 INITNTYILRSLPPTIINGALRATLNGISFVNPSTPVRLADRNKVKGAYKL-DFPDRPFN 422
Query: 405 GNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLR 464
L S++ A ++ F+++VFQN + +QS+H+DGYSFFVVGMD G W+ + YN
Sbjct: 423 RPLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNW 482
Query: 465 DTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELP 524
D ++RST +VYP WTA+ ++LDNVG+WNIR EN R YLG++ Y+R+ +P + E+
Sbjct: 483 DAISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMD 542
Query: 525 IPKNALLCGRAR 536
P N L CG +
Sbjct: 543 PPDNVLYCGALK 554
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/531 (48%), Positives = 347/531 (65%), Gaps = 21/531 (3%)
Query: 23 YGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFL 82
+ PY + + ++Y PLGV QQ I +NG+FPGP I+A TN N+ ++V N+L EP L
Sbjct: 22 FAGDPYVSYDFTLSYITASPLGVPQQVIAVNGKFPGPVINATTNYNVHVNVLNHLDEPLL 81
Query: 83 ISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGG 142
++W G+Q RRNSWQDGV GT CPIPP NFTY Q KDQIGSYFY PS F +A+G FG
Sbjct: 82 LTWPGVQMRRNSWQDGVLGTNCPIPPNWNFTYDFQLKDQIGSYFYSPSLNFQRASGGFGA 141
Query: 143 IRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNG 202
+ I +R +P+PF P G+ + GDWY NH LRR+LDSG L PDG+LING+G
Sbjct: 142 LIINNRDLVPIPFTEPDGEIIFIIGDWYTQNHTALRRILDSGKELGMPDGVLINGKGPFK 201
Query: 203 Y-----------TFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYA 251
Y T V+PG+TYR R+ NVG++TS+NFRIQ H + L+E EG +T Q +
Sbjct: 202 YNSSVPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRYTSQMNFT 261
Query: 252 ALDIHLGQTYSVLVTMDQ-APQDYYIVVSSRFTPRV----LTTTAILHYSNSRRGVSGPI 306
D+H+GQ+YS LVTMDQ A DYYIV S+RF +T ILHYSNS+ SGP+
Sbjct: 262 DFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSKGPASGPL 321
Query: 307 PGGPT-TEIAWS-LNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAP-YMNG 363
P T WS +NQ R+I+ N +ASG RPNPQGS+HYG I I+RT L + P +NG
Sbjct: 322 PVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQINITRTYILRSLPPTKING 381
Query: 364 KQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSP-NWGNAYLQTSVMAANFREFV 422
K R +N +SFV TP++LAD K+ G + L P P + L +S++ A ++ F+
Sbjct: 382 KLRATLNGISFVNPSTPMRLADDHKVKGDYML-DFPDRPLDEKLPRLSSSIINATYKGFI 440
Query: 423 EIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAI 482
+++FQN + +QS+HIDGY+F+VV MD G W+ + YN D VARST +VYP +WTA+
Sbjct: 441 QVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVYPGAWTAV 500
Query: 483 YMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCG 533
++LDNVG+WNIR EN R YLGQ+ Y+R+ +P + E+ P+N + CG
Sbjct: 501 LISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYCG 551
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 158/568 (27%), Positives = 250/568 (44%), Gaps = 49/568 (8%)
Query: 2 RDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQI 61
R S +L + LL +L+ H + R + + + ++ L + + +NG+FPGP +
Sbjct: 9 RLSLLLMAACFLLQALSAHAIT-----RHYKFNVVMRNMTRLCSTKPILTVNGKFPGPTL 63
Query: 62 DAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDG-VYGTTCPIPPGKNFTYVLQAKD 120
A DN+++ V N++ I W+G++Q R W DG Y T CPI PG +F Y
Sbjct: 64 YAREGDNVLVKVVNHVAHNVTIHWHGVRQIRTGWYDGPAYITQCPIQPGSSFLYNFTITG 123
Query: 121 QIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSN-HYVLRR 179
Q G+ + + +A G I I + +P PFP P + ++ G+W++ + V+ +
Sbjct: 124 QRGTLLWHAHINWLRAT-VHGAIVILPKLGVPYPFPAPHKEAVIVLGEWWKEDTETVINQ 182
Query: 180 LLDSGHNLPFPDGLLINGR---------GWNGYTFTVEPGRTYRFRISNVGLTTSINFRI 230
+ G D ING +G+ +VE G+TY RI N L + F++
Sbjct: 183 AMQLGVGPNISDSHTINGHPGPLSECASSQDGFKLSVENGKTYMLRIINAALNDDLFFKV 242
Query: 231 QGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRV---- 286
GH + +VEV+ +T L I GQT +VLV +Q Y + VS V
Sbjct: 243 AGHELTVVEVDAVYTKPFKTDTLLITPGQTTNVLVRANQGAGRYLLSVSPFMDAPVQVDN 302
Query: 287 LTTTAILHYSNSRRG------VSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGS 340
T TA LHY+N+ + P P T ++ + S+ + P PQ
Sbjct: 303 KTGTATLHYANTVSSSMASLTLVKPPPQNATHIVSKFTDSLHSLN---SKEYPANVPQTV 359
Query: 341 YHYGMIKISRTITLANSAPYMNGKQRYA-INSVSFVPADTPLKLADYFKIPGVFTLGSMP 399
H ++ + + S +NG + IN+V+F+ TP+ A Y+ IPGVFT P
Sbjct: 360 DHSLLLTVGVGVNPCPSC--INGTRVVGTINNVTFIMPSTPILQAHYYNIPGVFT-EDFP 416
Query: 400 TSP-------NWGNAYLQ----TSVMAANFREFVEIVFQN---WEDTVQSYHIDGYSFFV 445
+P G LQ T V + V++V Q+ H+ G++FFV
Sbjct: 417 ATPLHKFNYTGSGPKNLQTMNGTRVYRLPYNASVQVVLQDTGIISPESHPIHLHGFNFFV 476
Query: 446 VGMDGGQWTP-ASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYL 504
VG G + P S + +NL D + R+T V WTAI DN G+W +
Sbjct: 477 VGKGVGNYNPRTSPSTFNLIDPIERNTIGVPTGGWTAIRFRSDNPGVWFMHCHFEVHTSW 536
Query: 505 GQQFYLRVYSPANSWRDELPIPKNALLC 532
G + V + +P PK+ C
Sbjct: 537 GLKMAFVVDNGKRPSETLIPPPKDLPQC 564
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 | Back alignment and function description |
|---|
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 239/557 (42%), Gaps = 67/557 (12%)
Query: 26 SPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLIS 84
S R + W++ Y P + + INGQFPGP I A D +++ + N L E +I
Sbjct: 31 SQIRHYKWEVEYMFWAPDCNENIVMGINGQFPGPTIRANAGDTVVVELINKLHTEGVVIH 90
Query: 85 WNGLQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGI 143
W+G+ QR W DG + C I PG+ F Y D G++FY ++AG +G +
Sbjct: 91 WHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSL 149
Query: 144 RIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSG--HNLPFPDGLLINGRG-- 199
+ PF G+ +L DW+ + + L S + P +L+NGRG
Sbjct: 150 IVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQF 208
Query: 200 ----------------------WNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKL 237
Y F V P +TYR RI++ ++NF I H + +
Sbjct: 209 DCSIAAKYDSNLEPCKLKGSEPCAPYIFHVMPKKTYRIRIASTTALAALNFAIGNHPLLV 268
Query: 238 VEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAP-QDYYIVVSSR----FTPRVLTTTAI 292
VE +G++ + +DI+ G++YSVL+T DQ P ++Y++ V +R TP LT
Sbjct: 269 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRGRHPNTPPGLTLLNY 328
Query: 293 LHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTI 352
L S S+ S P P T +++++ + +TA+ P P +K +R I
Sbjct: 329 LPNSVSKLPTSPP----PETPAWDDFDRSKNFTYRITAAMGSPKPP-------VKSNRRI 377
Query: 353 TLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMP----------TSP 402
L N+ +NG ++AIN VS TP A F + F P T P
Sbjct: 378 FLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVFPEDYDIDTPP 437
Query: 403 NWGNAYLQTSVMAANFREFVEIVFQNWE------DTVQSYHIDGYSFFVVGMDGGQWTPA 456
+ V E V+++ QN + +H+ G+ F+V+G G++T
Sbjct: 438 TNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGKFTAE 497
Query: 457 SRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPA 516
+ NL++ R+T ++P WTAI DN G+W ++G A
Sbjct: 498 EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF-----A 552
Query: 517 NSWRDELPIPKNALLCG 533
IP AL CG
Sbjct: 553 EGVEKVGRIPTKALACG 569
|
May be involved in a redox system involving ascorbic acid. Cucurbita maxima (taxid: 3661) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 240/542 (44%), Gaps = 46/542 (8%)
Query: 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGL 88
+ + + I ++ L ++ + +NG +PGP I A D +I++V N+++ I W+GL
Sbjct: 29 KRYQFDIVMSNVSRLCHEKAMVTVNGSYPGPTIYAREGDRVIVNVTNHVKHNMTIHWHGL 88
Query: 89 QQRRNSWQDG-VYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWS 147
+QRRN W DG Y T CPI G ++ Y Q G+ ++ + +A G I I
Sbjct: 89 KQRRNGWADGPAYVTQCPIGSGGSYVYDFNVTRQRGTLWWHAHIAWMRAT-VHGAIVILP 147
Query: 148 RPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRR---LLDSGHNLPFPDGLLINGR------ 198
+P PFP P + ++ G+W+ ++ + R +L N+ D ING+
Sbjct: 148 AAGVPYPFPKPDDEAEIVLGEWWHADVETVERQGSMLGMAPNM--SDAHTINGKPGPLVP 205
Query: 199 ---GWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDI 255
+ Y V+ G+TY RI N + + F I GH+M +VE++ ++T + + +
Sbjct: 206 FCSEKHTYALQVQSGKTYLLRIINAAVNDELFFSIAGHNMTVVEIDATYTKPFAASTVQL 265
Query: 256 HLGQTYSVLVTMDQAPQDYYIVVSS----RFTPRVLTTTAILHYSNSRRGVSGPIP---- 307
GQT +VLV+ DQ+P Y++V T TAIL Y+ V +P
Sbjct: 266 SPGQTMNVLVSADQSPGRYFMVAKPFNDVPIPADNKTATAILQYAGVPTSVVPALPQTMP 325
Query: 308 -GGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQR 366
T +A ++ RS+ + P P + + I I + +
Sbjct: 326 ATNSTGSVAAFHDKLRSLN---SPRYPADVPLAVDRHLLYTIGLNIDPCETC-LNRSRLA 381
Query: 367 YAINSVSFVPADTPLKLADYFKIPGVFTLG------------SMPTSPNWGNAYLQTSVM 414
++N+++FV T L A Y+ GVF +P + G + L T +
Sbjct: 382 ASLNNITFVMPRTALLQAHYYGQKGVFAADFPDRPPARFNYTGVPLTAGLGTS-LGTRLS 440
Query: 415 AANFREFVEIVFQNWE-DTVQS--YHIDGYSFFVVGMDGGQWTPASR-TRYNLRDTVARS 470
+ VE+V Q+ +V+S +H+ GY+FFVVG G + PA +YNL D R+
Sbjct: 441 KIAYNATVELVLQDTNLLSVESHPFHLHGYNFFVVGRGVGNFDPAKDPAKYNLVDPPERN 500
Query: 471 TTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNAL 530
T V WTAI DN G+W + G + V + LP PK+
Sbjct: 501 TVGVPAGGWTAIRFRADNPGVWFLHCHLEVHTSWGLKMAFLVEDGSGPDESVLPPPKDLP 560
Query: 531 LC 532
C
Sbjct: 561 KC 562
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 231/526 (43%), Gaps = 52/526 (9%)
Query: 50 ILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDG-VYGTTCPIPP 108
+ +NGQFPGP I A D ++I V N+++ I W+G++Q R W DG Y T CPI P
Sbjct: 50 VTVNGQFPGPTIVAREGDTILIKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQP 109
Query: 109 GKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGD 168
G+N+ + Q G+ ++ L+ +A G I I + +P PFP P + T++ +
Sbjct: 110 GQNYLHNFTLTGQRGTLWWHAHILWLRAT-VHGAIVILPKLGVPYPFPKPYKEKTIVLSE 168
Query: 169 WYRSNHYVLRRLLDSG------------HNLPFPDGLLINGRGWNGYTFTVEPGRTYRFR 216
W++S+ + L++ H + G + N + Y V G+TY R
Sbjct: 169 WWKSD---VEELINEASRIGTAPSASDAHTINGHSGSISNCPSQSSYGLPVRAGKTYMLR 225
Query: 217 ISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYI 276
I N L + F+I GH + +VEV+ +T + I GQT +VL+T + Y+
Sbjct: 226 IINAALNEELFFKIAGHVLTVVEVDAVYTKPYKTDTVFIAPGQTTNVLLTANANAGSNYM 285
Query: 277 VVSSRFTPRVL-----TTTAILHY-------SNSRRGVSGPIPGGPTTEIAWSLNQARSI 324
V ++ FT + T TA LHY S S++ V +P T +A RS+
Sbjct: 286 VAATTFTDAHIPYDNVTATATLHYIGHTSTVSTSKKTVLASLPPQNATWVATKF--TRSL 343
Query: 325 RWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYA--INSVSFVPADTPLK 382
R + P P H + AN N R IN+V+F T L
Sbjct: 344 RSLNSLEYPARVPTTVEHSLFFTVGLG---ANPCQSCNNGVRLVAGINNVTFTMPKTALL 400
Query: 383 LADYFKIPGVFT--LGSMPTSPNWGNAYLQTSVMAANFR----------EFVEIVFQNWE 430
A +F I GVFT + P++P A ++ V AA + V+IV QN
Sbjct: 401 QAHFFNISGVFTDDFPAKPSNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIVLQNTA 460
Query: 431 DTVQS---YHIDGYSFFVVGMDGGQWTPASRTR-YNLRDTVARSTTQVYPRSWTAIYMAL 486
+ +H+ G++FF VG G + P + +NL D V R+T V WTAI
Sbjct: 461 MILSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGWTAIRFIA 520
Query: 487 DNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLC 532
DN G+W + G + V + + LP P + C
Sbjct: 521 DNPGVWFMHCHLELHTTWGLKMAFVVDNGHGPDQSLLPPPADLPKC 566
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 | Back alignment and function description |
|---|
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 240/557 (43%), Gaps = 67/557 (12%)
Query: 26 SPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLIS 84
S R + W++ Y P + + INGQFPGP I A D++++ + N L E +I
Sbjct: 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 85 WNGLQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGI 143
W+G+ QR W DG + C I PG+ F Y D G++FY ++AG +G +
Sbjct: 61 WHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSL 119
Query: 144 RIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSG--HNLPFPDGLLINGRG-- 199
+ PF G+ +L DW+ + + L S + P +L+NGRG
Sbjct: 120 IVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQF 178
Query: 200 ----------------------WNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKL 237
Y F V P +TYR RI++ ++NF I H + +
Sbjct: 179 DCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238
Query: 238 VEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAP-QDYYIVVSSRF----TPRVLTTTAI 292
VE +G++ + +DI+ G++YSVL+T DQ P ++Y++ V +R TP LT
Sbjct: 239 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNY 298
Query: 293 LHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTI 352
L S S+ S P P T +++++ + +TA+ P P +K +R I
Sbjct: 299 LPNSVSKLPTSPP----PQTPAWDDFDRSKNFTYRITAAMGSPKPP-------VKFNRRI 347
Query: 353 TLANSAPYMNGKQRYAINSVSFVPADTP---------LKLADYFKIPGVFTLG-SMPTSP 402
L N+ +NG ++AIN VS TP L D P VF + T P
Sbjct: 348 FLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPP 407
Query: 403 NWGNAYLQTSVMAANFREFVEIVFQNWE------DTVQSYHIDGYSFFVVGMDGGQWTPA 456
+ V E V+++ QN +H+ G+ F+V+G G+++
Sbjct: 408 TNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAE 467
Query: 457 SRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPA 516
+ NL++ R+T ++P WTAI DN G+W ++G A
Sbjct: 468 EESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF-----A 522
Query: 517 NSWRDELPIPKNALLCG 533
IP AL CG
Sbjct: 523 EGVEKVGRIPTKALACG 539
|
May be involved in a redox system involving ascorbic acid. Cucurbita pepo var. melopepo (taxid: 3665) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 543 | ||||||
| 449454744 | 542 | PREDICTED: L-ascorbate oxidase homolog [ | 0.998 | 1.0 | 0.837 | 0.0 | |
| 307136224 | 542 | multicopper oxidase [Cucumis melo subsp. | 0.998 | 1.0 | 0.836 | 0.0 | |
| 118487967 | 544 | unknown [Populus trichocarpa] | 1.0 | 0.998 | 0.856 | 0.0 | |
| 224113273 | 544 | predicted protein [Populus trichocarpa] | 1.0 | 0.998 | 0.854 | 0.0 | |
| 255554849 | 541 | multicopper oxidase, putative [Ricinus c | 0.966 | 0.970 | 0.860 | 0.0 | |
| 225444480 | 540 | PREDICTED: L-ascorbate oxidase homolog [ | 0.994 | 1.0 | 0.832 | 0.0 | |
| 15234688 | 541 | protein SKU5 similar 4 [Arabidopsis thal | 0.994 | 0.998 | 0.790 | 0.0 | |
| 297803930 | 541 | hypothetical protein ARALYDRAFT_914433 [ | 0.994 | 0.998 | 0.788 | 0.0 | |
| 356563035 | 549 | PREDICTED: L-ascorbate oxidase homolog [ | 1.0 | 0.989 | 0.779 | 0.0 | |
| 356522001 | 547 | PREDICTED: L-ascorbate oxidase homolog [ | 1.0 | 0.992 | 0.784 | 0.0 |
| >gi|449454744|ref|XP_004145114.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] gi|449471151|ref|XP_004153223.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] gi|449488325|ref|XP_004158002.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/543 (83%), Positives = 504/543 (92%), Gaps = 1/543 (0%)
Query: 1 MRDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQ 60
MR+ RVLCSLI L+L AV+ V D+PYRFFTWK+TYGDIYPLGVKQQGILINGQFPGPQ
Sbjct: 1 MREYRVLCSLIILVL-FAVNEVNADNPYRFFTWKVTYGDIYPLGVKQQGILINGQFPGPQ 59
Query: 61 IDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKD 120
IDAVTNDNLII+VYNYL+EPFLISWNGLQQRRNSWQDGVYGTTC IPP +NFTY LQAKD
Sbjct: 60 IDAVTNDNLIINVYNYLKEPFLISWNGLQQRRNSWQDGVYGTTCAIPPMRNFTYTLQAKD 119
Query: 121 QIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL 180
QIGSYFYFPS FHKAAGAFGGIRIWSRP IPVPF PPAGDFTVLAGDWY++NHY++R++
Sbjct: 120 QIGSYFYFPSTAFHKAAGAFGGIRIWSRPGIPVPFAPPAGDFTVLAGDWYKTNHYIMRQV 179
Query: 181 LDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEV 240
LDSG N+P PDGLLINGRGWNGYTF V+PG+TYRFRISNVG++ SINFRIQGH MKLVEV
Sbjct: 180 LDSGKNIPSPDGLLINGRGWNGYTFNVDPGKTYRFRISNVGISASINFRIQGHLMKLVEV 239
Query: 241 EGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRR 300
EGSHTLQNTY++LDIHLGQ+YSVLVT +Q P+DYY+VVSSRFT +LTTTA+LHYSNS +
Sbjct: 240 EGSHTLQNTYSSLDIHLGQSYSVLVTANQPPKDYYVVVSSRFTSPILTTTAVLHYSNSWQ 299
Query: 301 GVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPY 360
VSGP+PGGPTTEIAWSL QARSIRWNLTASGPRPNPQGSYHYG+IK SRTI LANSAP
Sbjct: 300 KVSGPVPGGPTTEIAWSLQQARSIRWNLTASGPRPNPQGSYHYGLIKTSRTIVLANSAPV 359
Query: 361 MNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFRE 420
+NGKQR+A+NSVSFV ADTPLKLADYFKIPGVF L ++PT+P WGNAYLQTSVM +NFRE
Sbjct: 360 INGKQRFAVNSVSFVQADTPLKLADYFKIPGVFNLNNIPTNPTWGNAYLQTSVMGSNFRE 419
Query: 421 FVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWT 480
++EIVFQNWE+TVQS+HI GYSFFVVGMDGGQWTPASR+RYNLRDTVAR TTQVYP+SWT
Sbjct: 420 YIEIVFQNWENTVQSWHISGYSFFVVGMDGGQWTPASRSRYNLRDTVARCTTQVYPKSWT 479
Query: 481 AIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHT 540
AIYMALDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S+RDELPIP+NALLCGRA GRHT
Sbjct: 480 AIYMALDNVGMWNVRSESWARQYLGQQFYLRVYTSSTSFRDELPIPRNALLCGRASGRHT 539
Query: 541 RPL 543
RPL
Sbjct: 540 RPL 542
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|307136224|gb|ADN34061.1| multicopper oxidase [Cucumis melo subsp. melo] | Back alignment and taxonomy information |
|---|
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/543 (83%), Positives = 501/543 (92%), Gaps = 1/543 (0%)
Query: 1 MRDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQ 60
MR+ RVLCSLI L+L AV+ D+PYRFFTWK+TYG+IYPLGV+QQGILINGQFPGPQ
Sbjct: 1 MREYRVLCSLIILVL-FAVNEANADNPYRFFTWKVTYGNIYPLGVRQQGILINGQFPGPQ 59
Query: 61 IDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKD 120
IDAVTNDNLII+VYNYL+EPFLISWNGLQQRRNSWQDGVYGTTC IPP +NFTY LQAKD
Sbjct: 60 IDAVTNDNLIINVYNYLKEPFLISWNGLQQRRNSWQDGVYGTTCAIPPMRNFTYTLQAKD 119
Query: 121 QIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL 180
QIGSYFYFPS FHKAAGAFGGIRIWSRP IPVPFP PAGDFTVLAGDWY++NHY+LRR+
Sbjct: 120 QIGSYFYFPSTAFHKAAGAFGGIRIWSRPGIPVPFPSPAGDFTVLAGDWYKTNHYILRRV 179
Query: 181 LDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEV 240
LDSG NLP PDGLLINGRGWNGYTF V+PG+TYRFRISNVG++ SINFRIQGH MKLVEV
Sbjct: 180 LDSGKNLPSPDGLLINGRGWNGYTFNVDPGKTYRFRISNVGISASINFRIQGHLMKLVEV 239
Query: 241 EGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRR 300
EGSHTLQNTY++LDIHLGQ+YSVLVT +Q P+DYY+VVSSRFT +LTTTA+LHYSNS +
Sbjct: 240 EGSHTLQNTYSSLDIHLGQSYSVLVTANQPPKDYYVVVSSRFTSPILTTTAVLHYSNSWQ 299
Query: 301 GVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPY 360
VSGP+PGGPTTEIAWSL QARSIRWNLTASGPRPNPQGSYHYG+IK SRTI LANSAP
Sbjct: 300 KVSGPVPGGPTTEIAWSLQQARSIRWNLTASGPRPNPQGSYHYGLIKTSRTIVLANSAPV 359
Query: 361 MNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFRE 420
+NGKQR+A+N VSFV ADTPLKLADYFKIPGVF L S+PT+P WGNAYLQTSVM +NFRE
Sbjct: 360 INGKQRFAVNGVSFVQADTPLKLADYFKIPGVFNLNSIPTNPTWGNAYLQTSVMGSNFRE 419
Query: 421 FVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWT 480
++EIVFQNWE+TVQS+HI GYSFFVVGMDGGQWTPASR RYNLRDTVAR TTQVYP++WT
Sbjct: 420 YIEIVFQNWENTVQSWHISGYSFFVVGMDGGQWTPASRGRYNLRDTVARCTTQVYPKAWT 479
Query: 481 AIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHT 540
AIYMALDNVGMWN+RSE+WARQYLGQQFYLRVY+ + S+RDELPIP+NALLCGRA GRHT
Sbjct: 480 AIYMALDNVGMWNVRSESWARQYLGQQFYLRVYTSSTSFRDELPIPRNALLCGRASGRHT 539
Query: 541 RPL 543
RPL
Sbjct: 540 RPL 542
|
Source: Cucumis melo subsp. melo Species: Cucumis melo Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118487967|gb|ABK95805.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/544 (85%), Positives = 501/544 (92%), Gaps = 1/544 (0%)
Query: 1 MRDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQ 60
M D R C+ + + L +GV + PYRF TWKITYGDIYPLGVKQQGILINGQFPGPQ
Sbjct: 1 MGDYRAFCASLVVFLLFLGNGVNCEDPYRFITWKITYGDIYPLGVKQQGILINGQFPGPQ 60
Query: 61 IDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKD 120
IDAVTN+NLIISVYNYLREPFLISWNG+QQRRNSWQDGVYGT+CPIPPGKNFTY LQ KD
Sbjct: 61 IDAVTNENLIISVYNYLREPFLISWNGIQQRRNSWQDGVYGTSCPIPPGKNFTYALQVKD 120
Query: 121 QIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL 180
QIGS+FYFPS FHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWY+ NHY LRR+
Sbjct: 121 QIGSFFYFPSLGFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYKRNHYQLRRI 180
Query: 181 LDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEV 240
LD GHNLPFPDGLLINGRGWNGYTFTV+PG+TYRFRISNVGLTTSINFRIQGH MKLVEV
Sbjct: 181 LDGGHNLPFPDGLLINGRGWNGYTFTVDPGKTYRFRISNVGLTTSINFRIQGHKMKLVEV 240
Query: 241 EGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRR 300
EGSHTLQNTY+ LDIHLGQ+YSVLVT DQ +DYYIVVSSRFT VL TTA+LHYSNS +
Sbjct: 241 EGSHTLQNTYSDLDIHLGQSYSVLVTADQPAKDYYIVVSSRFTKPVLATTAVLHYSNSWQ 300
Query: 301 GVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPY 360
VSGPIPGGPTT+I WSLNQARS RWNLTASGPRPNPQGSYHYG+IK SRTITLANS P
Sbjct: 301 RVSGPIPGGPTTQIDWSLNQARSFRWNLTASGPRPNPQGSYHYGLIKTSRTITLANSGPI 360
Query: 361 MNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWG-NAYLQTSVMAANFR 419
+N KQRYA+N VS++PADTPLK+ADYF IPGVF+LGSMP+SP+WG NAYLQT+VM+ANFR
Sbjct: 361 INRKQRYAVNGVSYIPADTPLKIADYFNIPGVFSLGSMPSSPSWGNNAYLQTAVMSANFR 420
Query: 420 EFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSW 479
EF+EIVFQNWEDTVQS+HIDG+SFFVVGMDGGQWTPASR RYNLRDTVAR TTQVYP+SW
Sbjct: 421 EFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTPASRARYNLRDTVARCTTQVYPKSW 480
Query: 480 TAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRH 539
TAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPA+SWRDELPIPKNALLCGRARGRH
Sbjct: 481 TAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLCGRARGRH 540
Query: 540 TRPL 543
TRPL
Sbjct: 541 TRPL 544
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224113273|ref|XP_002332613.1| predicted protein [Populus trichocarpa] gi|222832814|gb|EEE71291.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/544 (85%), Positives = 500/544 (91%), Gaps = 1/544 (0%)
Query: 1 MRDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQ 60
M D R C+ + + L + V + PYRF TWKITYGDIYPLGVKQQGILINGQFPGPQ
Sbjct: 1 MGDYRAFCASLVVFLLFLGNDVNCEDPYRFITWKITYGDIYPLGVKQQGILINGQFPGPQ 60
Query: 61 IDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKD 120
IDAVTN+NLIISVYNYLREPFLISWNG+QQRRNSWQDGVYGT+CPIPPGKNFTY LQ KD
Sbjct: 61 IDAVTNENLIISVYNYLREPFLISWNGIQQRRNSWQDGVYGTSCPIPPGKNFTYALQVKD 120
Query: 121 QIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL 180
QIGS+FYFPS FHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWY+ NHY LRR+
Sbjct: 121 QIGSFFYFPSLGFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYKRNHYQLRRI 180
Query: 181 LDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEV 240
LD GHNLPFPDGLLINGRGWNGYTFTV+PG+TYRFRISNVGLTTSINFRIQGH MKLVEV
Sbjct: 181 LDGGHNLPFPDGLLINGRGWNGYTFTVDPGKTYRFRISNVGLTTSINFRIQGHKMKLVEV 240
Query: 241 EGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRR 300
EGSHTLQNTY+ LDIHLGQ+YSVLVT DQ +DYYIVVSSRFT VL TTA+LHYSNS +
Sbjct: 241 EGSHTLQNTYSDLDIHLGQSYSVLVTADQPAKDYYIVVSSRFTKPVLATTAVLHYSNSWQ 300
Query: 301 GVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPY 360
VSGPIPGGPTT+I WSLNQARS RWNLTASGPRPNPQGSYHYG+IK SRTITLANS P
Sbjct: 301 RVSGPIPGGPTTQIDWSLNQARSFRWNLTASGPRPNPQGSYHYGLIKTSRTITLANSGPI 360
Query: 361 MNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWG-NAYLQTSVMAANFR 419
+N KQRYA+N VS++PADTPLK+ADYF IPGVF+LGSMP+SP+WG NAYLQT+VM+ANFR
Sbjct: 361 INRKQRYAVNGVSYIPADTPLKIADYFNIPGVFSLGSMPSSPSWGNNAYLQTAVMSANFR 420
Query: 420 EFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSW 479
EF+EIVFQNWEDTVQS+HIDG+SFFVVGMDGGQWTPASR RYNLRDTVAR TTQVYP+SW
Sbjct: 421 EFIEIVFQNWEDTVQSWHIDGHSFFVVGMDGGQWTPASRARYNLRDTVARCTTQVYPKSW 480
Query: 480 TAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRH 539
TAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPA+SWRDELPIPKNALLCGRARGRH
Sbjct: 481 TAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPAHSWRDELPIPKNALLCGRARGRH 540
Query: 540 TRPL 543
TRPL
Sbjct: 541 TRPL 544
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554849|ref|XP_002518462.1| multicopper oxidase, putative [Ricinus communis] gi|223542307|gb|EEF43849.1| multicopper oxidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/525 (86%), Positives = 492/525 (93%)
Query: 19 VHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR 78
+ V G++PYRFFTWK+TYGDIYPLGVKQQGILINGQFPGPQID VTNDNLII+V+NYLR
Sbjct: 17 IQSVNGENPYRFFTWKVTYGDIYPLGVKQQGILINGQFPGPQIDVVTNDNLIINVFNYLR 76
Query: 79 EPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAG 138
EPFLISWNG+QQRRNSWQDGVYGT CPI PG+NFTY+LQ KDQIGSYFYFPS HKAAG
Sbjct: 77 EPFLISWNGIQQRRNSWQDGVYGTNCPILPGRNFTYILQVKDQIGSYFYFPSLGMHKAAG 136
Query: 139 AFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGR 198
FGGIR+WSRPRIPVPFPPP+GDFTVLAGDWY+ NHY LRR+LD+GH+LPFPDGLLINGR
Sbjct: 137 GFGGIRVWSRPRIPVPFPPPSGDFTVLAGDWYKRNHYQLRRILDAGHDLPFPDGLLINGR 196
Query: 199 GWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLG 258
GWNGYTFTV+P +TYRFRISNVGL+TSINFRIQGH MKLVEVEGSHTLQNTY+ALDIHLG
Sbjct: 197 GWNGYTFTVDPVKTYRFRISNVGLSTSINFRIQGHKMKLVEVEGSHTLQNTYSALDIHLG 256
Query: 259 QTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSL 318
Q+YSVLVT DQ +DYYIVVS+RFT RVLTTTAILHYSNSR GVSGPIPGGPTT+I WSL
Sbjct: 257 QSYSVLVTADQPAKDYYIVVSTRFTARVLTTTAILHYSNSRDGVSGPIPGGPTTQIDWSL 316
Query: 319 NQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPAD 378
NQARS+RWNLTASGPRPNPQGSYHYG+IK SRTITLANSAP +N KQR+A+NSVSF+P D
Sbjct: 317 NQARSLRWNLTASGPRPNPQGSYHYGLIKTSRTITLANSAPLINRKQRFAVNSVSFIPPD 376
Query: 379 TPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHI 438
TPLKLADYFKIPGVF LGS+P+ P WGNAYLQTSVM+ANFREF+EI+FQNWED+VQS+HI
Sbjct: 377 TPLKLADYFKIPGVFNLGSIPSYPTWGNAYLQTSVMSANFREFIEIIFQNWEDSVQSWHI 436
Query: 439 DGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSEN 498
DG+SFFVVGMDGGQWT ASR RYNLRD VAR TTQVYP+SWTA+YMALDNVGMWNIRSEN
Sbjct: 437 DGHSFFVVGMDGGQWTTASRARYNLRDAVARCTTQVYPKSWTAVYMALDNVGMWNIRSEN 496
Query: 499 WARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHTRPL 543
WARQYLGQQ YLRVYSPANSWRDELPIP+NALLCGRARGRHTRPL
Sbjct: 497 WARQYLGQQLYLRVYSPANSWRDELPIPRNALLCGRARGRHTRPL 541
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444480|ref|XP_002272880.1| PREDICTED: L-ascorbate oxidase homolog [Vitis vinifera] gi|302144125|emb|CBI23230.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/543 (83%), Positives = 490/543 (90%), Gaps = 3/543 (0%)
Query: 1 MRDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQ 60
MRD LC +L L + GV+G+ PYRF+TWK+TYGDIYPLGVKQQGILINGQFPGPQ
Sbjct: 1 MRD---LCFFTIFILGLLLPGVHGEDPYRFYTWKVTYGDIYPLGVKQQGILINGQFPGPQ 57
Query: 61 IDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKD 120
IDAVTNDNLIISVYNYLREPFLISW+GLQQRRNSWQDG+YGT CPIPPG+N TY LQ KD
Sbjct: 58 IDAVTNDNLIISVYNYLREPFLISWSGLQQRRNSWQDGMYGTNCPIPPGRNMTYALQVKD 117
Query: 121 QIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL 180
QIGS+FYFPS FHKAAG FGGIRI SRPRIPVPFP P+GDFTVLAGDW++ +H VL+ +
Sbjct: 118 QIGSFFYFPSLAFHKAAGGFGGIRILSRPRIPVPFPAPSGDFTVLAGDWFKRDHAVLKGI 177
Query: 181 LDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEV 240
LD GHNLPFPDGLLINGRGWNGYTF V+ G+TYRFRISNVGLTTSINFRIQGH MKLVEV
Sbjct: 178 LDRGHNLPFPDGLLINGRGWNGYTFQVDQGKTYRFRISNVGLTTSINFRIQGHKMKLVEV 237
Query: 241 EGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRR 300
EGSHTLQNTY+ALDIHLGQ+YSVLVT DQ PQDYY+VVSSRFT VLTTTAILHYS S +
Sbjct: 238 EGSHTLQNTYSALDIHLGQSYSVLVTADQPPQDYYVVVSSRFTSPVLTTTAILHYSWSTK 297
Query: 301 GVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPY 360
G+SGP PGGPT ++ WSLNQARSIRWNLTASGPRPNPQGSYHYG+I SRTITLANSAP
Sbjct: 298 GLSGPPPGGPTIQVDWSLNQARSIRWNLTASGPRPNPQGSYHYGLITTSRTITLANSAPM 357
Query: 361 MNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFRE 420
+NGKQRYA+NSVSFVPA TPLKLADYFKIPGVF LGS+P+ P WGN YLQTSVM A+FR
Sbjct: 358 INGKQRYAVNSVSFVPASTPLKLADYFKIPGVFNLGSIPSYPTWGNGYLQTSVMHADFRS 417
Query: 421 FVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWT 480
+VEIVFQNWED VQS+HIDGYSFFV+GMDGGQWTPASR YNLRDTVAR T QVYP++WT
Sbjct: 418 YVEIVFQNWEDIVQSWHIDGYSFFVMGMDGGQWTPASRASYNLRDTVARCTVQVYPKAWT 477
Query: 481 AIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHT 540
AIYMALDNVGMWN+RSENWARQYLGQQFYLRV+SPANSWRDELPIPKNALLCGRA GRHT
Sbjct: 478 AIYMALDNVGMWNVRSENWARQYLGQQFYLRVFSPANSWRDELPIPKNALLCGRASGRHT 537
Query: 541 RPL 543
RPL
Sbjct: 538 RPL 540
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15234688|ref|NP_193932.1| protein SKU5 similar 4 [Arabidopsis thaliana] gi|2961346|emb|CAA18104.1| pectinesterase like protein [Arabidopsis thaliana] gi|7269046|emb|CAB79156.1| pectinesterase like protein [Arabidopsis thaliana] gi|19698977|gb|AAL91224.1| pectinesterase-like protein [Arabidopsis thaliana] gi|31711964|gb|AAP68338.1| At4g22010 [Arabidopsis thaliana] gi|332659142|gb|AEE84542.1| protein SKU5 similar 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/544 (79%), Positives = 490/544 (90%), Gaps = 4/544 (0%)
Query: 1 MRDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQ 60
MR S C + +LL + ++GV GD+PYRFFTWKITYGDIYPLGVKQQGILINGQFPGP
Sbjct: 1 MRGS---CKVSIVLLLVLINGVLGDNPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPH 57
Query: 61 IDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKD 120
IDA+TNDN+IISV+NYL+EPFLISWNG+QQR+NSWQDGV GTTCPIPPGKNFTYV+Q KD
Sbjct: 58 IDAITNDNIIISVFNYLKEPFLISWNGVQQRKNSWQDGVVGTTCPIPPGKNFTYVIQVKD 117
Query: 121 QIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL 180
QIGS++YFPS FHKAAGAFG IR+WSRPRIPVPF PP GDF +LAGDWY++NHYVLRRL
Sbjct: 118 QIGSFYYFPSLAFHKAAGAFGAIRVWSRPRIPVPFSPPDGDFWLLAGDWYKTNHYVLRRL 177
Query: 181 LDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEV 240
L++G NLP PDG+LINGRGW G TFTV+PG+TYRFRISNVG+ TS+NFRIQGH+MKLVEV
Sbjct: 178 LEAGRNLPNPDGVLINGRGWGGNTFTVQPGKTYRFRISNVGVATSLNFRIQGHTMKLVEV 237
Query: 241 EGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRR 300
EGSHT+QN Y +LDIHLGQ+YSVLVT +QAPQDYYIV+SSRFT +VLTTT+ILHYSNSR+
Sbjct: 238 EGSHTVQNIYTSLDIHLGQSYSVLVTANQAPQDYYIVISSRFTRKVLTTTSILHYSNSRK 297
Query: 301 GVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPY 360
GVSGP+P GPT +IA SL QAR+IR NLTASGPRPNPQGSYHYG+IK RTI LANSAP+
Sbjct: 298 GVSGPVPNGPTLDIASSLYQARTIRRNLTASGPRPNPQGSYHYGLIKPGRTIILANSAPW 357
Query: 361 MNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGN-AYLQTSVMAANFR 419
+NGKQRYA+N SFV DTPLKLADYFKIPGVF LGS+PTSP+ GN YLQ+SVMAANFR
Sbjct: 358 INGKQRYAVNGASFVAPDTPLKLADYFKIPGVFNLGSIPTSPSGGNGGYLQSSVMAANFR 417
Query: 420 EFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSW 479
EF+E+VFQNWE++VQS+H+ GYSFFVVGMDGGQWTP SR +YNLRD V+RST QVYPR+W
Sbjct: 418 EFIEVVFQNWENSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVSRSTVQVYPRAW 477
Query: 480 TAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRH 539
TAIY+ALDNVGMWNIRSENWARQYLGQQFYLRVY+ + S+RDE P PKNAL+CGRA+GRH
Sbjct: 478 TAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALMCGRAKGRH 537
Query: 540 TRPL 543
TRP
Sbjct: 538 TRPF 541
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297803930|ref|XP_002869849.1| hypothetical protein ARALYDRAFT_914433 [Arabidopsis lyrata subsp. lyrata] gi|297315685|gb|EFH46108.1| hypothetical protein ARALYDRAFT_914433 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/544 (78%), Positives = 490/544 (90%), Gaps = 4/544 (0%)
Query: 1 MRDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQ 60
MR S C + +LL + ++GV+GD+PYRFFTWKITYGDIYPLGVKQQGILINGQFPGP
Sbjct: 1 MRGS---CKISIVLLLVLINGVFGDNPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPH 57
Query: 61 IDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKD 120
IDA+TNDN+IISV+NYL+EPFLISWNG+QQR+NSWQDGV GTTCPIPPGKNFTYV+Q KD
Sbjct: 58 IDAITNDNIIISVFNYLKEPFLISWNGVQQRKNSWQDGVVGTTCPIPPGKNFTYVIQVKD 117
Query: 121 QIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL 180
QIGS++YFPS FHKAAGAFG IR+WSRPRIPVPF PP GDF +LAGDWY++NHYVLRRL
Sbjct: 118 QIGSFYYFPSLAFHKAAGAFGAIRVWSRPRIPVPFSPPDGDFWLLAGDWYKTNHYVLRRL 177
Query: 181 LDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEV 240
L++G NLP PDG+LINGRGW G TFTV+PG+TYRFRISNVG+ TS+NFRIQGH+MKLVEV
Sbjct: 178 LEAGRNLPNPDGVLINGRGWGGNTFTVQPGKTYRFRISNVGVATSLNFRIQGHTMKLVEV 237
Query: 241 EGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRR 300
EGSHT+QN Y +LDIHLGQ+YSVLVT +QAPQDYYIV+SSRFT +VLTTT+ILHYSNSR+
Sbjct: 238 EGSHTVQNIYTSLDIHLGQSYSVLVTANQAPQDYYIVISSRFTRKVLTTTSILHYSNSRK 297
Query: 301 GVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPY 360
GVSGP+P GPT +IA SL QAR+IR NLTASGPRPNPQGSYHYG+IK RTI LANSAP+
Sbjct: 298 GVSGPVPNGPTLDIASSLYQARTIRRNLTASGPRPNPQGSYHYGLIKPGRTIILANSAPW 357
Query: 361 MNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGN-AYLQTSVMAANFR 419
+NGKQR+A+N SFV DTPLKLADYFKIPGVF LGS+PTSP GN YLQ+SVMAANFR
Sbjct: 358 INGKQRFAVNGASFVAPDTPLKLADYFKIPGVFNLGSIPTSPPGGNGGYLQSSVMAANFR 417
Query: 420 EFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSW 479
EF+E+VFQNWE +VQS+H+ GYSFFVVGMDGG+WTP SR++YNLRD V+RST QVYPR+W
Sbjct: 418 EFIEVVFQNWESSVQSWHVSGYSFFVVGMDGGEWTPGSRSKYNLRDAVSRSTVQVYPRAW 477
Query: 480 TAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRH 539
TAIY+ALDNVGMWNIRSENWARQYLGQQFYLRVY+ + S+RDE P PKNAL+CGRARGRH
Sbjct: 478 TAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALMCGRARGRH 537
Query: 540 TRPL 543
TRP
Sbjct: 538 TRPF 541
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563035|ref|XP_003549771.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/549 (77%), Positives = 478/549 (87%), Gaps = 6/549 (1%)
Query: 1 MRDSRVLCSLIALLLSLA-----VHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQ 55
MR + C++++ L+ L V+ + PYR+ TWK+TYGDIYPLGVKQQGILINGQ
Sbjct: 1 MRPCKCKCNVLSALILLVTFLFIASSVHCEDPYRYLTWKVTYGDIYPLGVKQQGILINGQ 60
Query: 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYV 115
FPGPQIDAVTNDNLII+VYNYLREPFLISWNGLQ RRNSWQDGVYGT CPIPPG+N TY
Sbjct: 61 FPGPQIDAVTNDNLIINVYNYLREPFLISWNGLQHRRNSWQDGVYGTNCPIPPGRNLTYA 120
Query: 116 LQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHY 175
+Q KDQIGSYFYFPS HKAAGAFGGIRIWSRP+IPVPFP PAGD T+LAGDW++ +H
Sbjct: 121 IQVKDQIGSYFYFPSLGMHKAAGAFGGIRIWSRPQIPVPFPSPAGDITILAGDWFKLDHR 180
Query: 176 VLRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSM 235
LRRLL++GHNLPFPDGLLINGRGWNG TFTV+ G+TYRFRISNVGLTTSINFRIQGHS+
Sbjct: 181 RLRRLLENGHNLPFPDGLLINGRGWNGNTFTVDQGKTYRFRISNVGLTTSINFRIQGHSL 240
Query: 236 KLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHY 295
KLVEVEGSHTLQNTY++LD+HLGQ+YSVLVT DQ +DYY+VVS+RFT R+LTTT++LHY
Sbjct: 241 KLVEVEGSHTLQNTYSSLDVHLGQSYSVLVTADQPVKDYYMVVSTRFTRRILTTTSVLHY 300
Query: 296 SNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLA 355
S S+ GVSGP+P GPT +IA S+ QAR+IRWNLTASGPRPNPQGSYHYG+IK SRTI LA
Sbjct: 301 SYSKTGVSGPVPPGPTLDIASSVYQARTIRWNLTASGPRPNPQGSYHYGLIKPSRTIMLA 360
Query: 356 NSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWG-NAYLQTSVM 414
NSAPY+NGKQRYA+N VS+ DTPLKLADYF IPGVF +GS+PT PN G NAYLQTSVM
Sbjct: 361 NSAPYINGKQRYAVNGVSYNEPDTPLKLADYFNIPGVFYVGSIPTYPNGGNNAYLQTSVM 420
Query: 415 AANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQV 474
ANF E VEIVFQNWED+VQS+HIDGYSFFVVG GQWT SR +YNLRDTVAR TTQV
Sbjct: 421 GANFHELVEIVFQNWEDSVQSWHIDGYSFFVVGYGSGQWTADSRVQYNLRDTVARCTTQV 480
Query: 475 YPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGR 534
YPRSWTAIYMALDNVGMWNIRSENW RQYLGQQ YLRVY+P+ SWRDE P+PKNALLCGR
Sbjct: 481 YPRSWTAIYMALDNVGMWNIRSENWGRQYLGQQLYLRVYTPSKSWRDEYPVPKNALLCGR 540
Query: 535 ARGRHTRPL 543
A GR TRP
Sbjct: 541 ASGRRTRPF 549
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522001|ref|XP_003529638.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/547 (78%), Positives = 478/547 (87%), Gaps = 4/547 (0%)
Query: 1 MRDSRVLCSLIA---LLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFP 57
MR + C++++ LL++ V+ + PYR+ TWK+TYGDIYPLGVKQQGILINGQFP
Sbjct: 1 MRPCKCKCNVLSALILLVTFLFASVHCEDPYRYLTWKVTYGDIYPLGVKQQGILINGQFP 60
Query: 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQ 117
GPQIDAVTNDNLII+VYNYLREPFLISWNGLQ RRNSWQDGVYGT CPIPPG+N TY +Q
Sbjct: 61 GPQIDAVTNDNLIINVYNYLREPFLISWNGLQHRRNSWQDGVYGTNCPIPPGRNLTYAIQ 120
Query: 118 AKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVL 177
KDQIGSYFYFPS HKAAGAFGGIRIWSRP IPVPFPPPAGDFT+LAGDW++ +H L
Sbjct: 121 VKDQIGSYFYFPSLGMHKAAGAFGGIRIWSRPLIPVPFPPPAGDFTILAGDWFKLDHRRL 180
Query: 178 RRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKL 237
RRLL++GHNLPFPDGLLINGRGWNG TFTV+ G+TYRFRISNVGLTTSINFRIQGH +KL
Sbjct: 181 RRLLENGHNLPFPDGLLINGRGWNGNTFTVDQGKTYRFRISNVGLTTSINFRIQGHRLKL 240
Query: 238 VEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSN 297
VEVEGSHTLQN+Y++LDIHLGQ+YSVLVT DQ +DYYIVVS+RFT R+LTTT++LHYS
Sbjct: 241 VEVEGSHTLQNSYSSLDIHLGQSYSVLVTADQPVKDYYIVVSTRFTRRILTTTSVLHYSY 300
Query: 298 SRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANS 357
S+ GVSGP+P GPT +I S+ QAR+IRWNLTASGPRPNPQGSYHYG+IK SRTI LANS
Sbjct: 301 SKTGVSGPVPPGPTLDITSSVYQARTIRWNLTASGPRPNPQGSYHYGLIKPSRTIMLANS 360
Query: 358 APYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWG-NAYLQTSVMAA 416
APY+NGKQRYA+N VS+ DTPLKLADYF IPGVF +GS+PT PN G NAYLQTSVM A
Sbjct: 361 APYINGKQRYAVNGVSYNAPDTPLKLADYFNIPGVFYVGSIPTYPNGGNNAYLQTSVMGA 420
Query: 417 NFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYP 476
NF EFVEIVFQNWED+VQS+HIDGYSFFVVG GQWT SR YNLRDTVAR TTQVYP
Sbjct: 421 NFHEFVEIVFQNWEDSVQSWHIDGYSFFVVGFGSGQWTADSRVHYNLRDTVARCTTQVYP 480
Query: 477 RSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRAR 536
RSWTAIYM+LDNVGMWNIRSENW RQYLGQQ YLRVY+P+ SWRDE P+PKNALLCGRA
Sbjct: 481 RSWTAIYMSLDNVGMWNIRSENWGRQYLGQQLYLRVYTPSKSWRDEYPVPKNALLCGRAS 540
Query: 537 GRHTRPL 543
GR TRP
Sbjct: 541 GRRTRPF 547
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 543 | ||||||
| TAIR|locus:2120648 | 541 | sks4 "SKU5 similar 4" [Arabido | 0.965 | 0.968 | 0.790 | 2e-239 | |
| TAIR|locus:2199798 | 541 | sks5 "SKU5 similar 5" [Arabido | 0.959 | 0.963 | 0.720 | 2.2e-208 | |
| TAIR|locus:2033513 | 542 | SKS6 "SKU5-similar 6" [Arabido | 0.959 | 0.961 | 0.689 | 1.8e-204 | |
| TAIR|locus:2036911 | 551 | sks8 "SKU5 similar 8" [Arabido | 0.952 | 0.938 | 0.670 | 2.4e-195 | |
| TAIR|locus:2201133 | 538 | sks7 "SKU5 similar 7" [Arabido | 0.948 | 0.957 | 0.657 | 7.5e-192 | |
| TAIR|locus:2121823 | 549 | sks9 "SKU5 similar 9" [Arabido | 0.959 | 0.948 | 0.656 | 2.3e-190 | |
| TAIR|locus:2132927 | 547 | sks10 "SKU5 similar 10" [Arabi | 0.935 | 0.928 | 0.6 | 1.7e-169 | |
| TAIR|locus:2174954 | 546 | sks17 "SKU5 similar 17" [Arabi | 0.950 | 0.945 | 0.563 | 2.1e-164 | |
| TAIR|locus:2092865 | 551 | sks13 "SKU5 similar 13" [Arabi | 0.942 | 0.929 | 0.538 | 3.6e-153 | |
| TAIR|locus:2115154 | 541 | sks15 "SKU5 similar 15" [Arabi | 0.952 | 0.955 | 0.539 | 7.4e-153 |
| TAIR|locus:2120648 sks4 "SKU5 similar 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2308 (817.5 bits), Expect = 2.0e-239, P = 2.0e-239
Identities = 415/525 (79%), Positives = 472/525 (89%)
Query: 19 VHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR 78
++GV GD+PYRFFTWKITYGDIYPLGVKQQGILINGQFPGP IDA+TNDN+IISV+NYL+
Sbjct: 16 INGVLGDNPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPHIDAITNDNIIISVFNYLK 75
Query: 79 EPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAG 138
EPFLISWNG+QQR+NSWQDGV GTTCPIPPGKNFTYV+Q KDQIGS++YFPS FHKAAG
Sbjct: 76 EPFLISWNGVQQRKNSWQDGVVGTTCPIPPGKNFTYVIQVKDQIGSFYYFPSLAFHKAAG 135
Query: 139 AFGGIRIWSRXXXXXXXXXXAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGR 198
AFG IR+WSR GDF +LAGDWY++NHYVLRRLL++G NLP PDG+LINGR
Sbjct: 136 AFGAIRVWSRPRIPVPFSPPDGDFWLLAGDWYKTNHYVLRRLLEAGRNLPNPDGVLINGR 195
Query: 199 GWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLG 258
GW G TFTV+PG+TYRFRISNVG+ TS+NFRIQGH+MKLVEVEGSHT+QN Y +LDIHLG
Sbjct: 196 GWGGNTFTVQPGKTYRFRISNVGVATSLNFRIQGHTMKLVEVEGSHTVQNIYTSLDIHLG 255
Query: 259 QTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSL 318
Q+YSVLVT +QAPQDYYIV+SSRFT +VLTTT+ILHYSNSR+GVSGP+P GPT +IA SL
Sbjct: 256 QSYSVLVTANQAPQDYYIVISSRFTRKVLTTTSILHYSNSRKGVSGPVPNGPTLDIASSL 315
Query: 319 NQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPAD 378
QAR+IR NLTASGPRPNPQGSYHYG+IK RTI LANSAP++NGKQRYA+N SFV D
Sbjct: 316 YQARTIRRNLTASGPRPNPQGSYHYGLIKPGRTIILANSAPWINGKQRYAVNGASFVAPD 375
Query: 379 TPLKLADYFKIPGVFTLGSMPTSPNWGNA-YLQTSVMAANFREFVEIVFQNWEDTVQSYH 437
TPLKLADYFKIPGVF LGS+PTSP+ GN YLQ+SVMAANFREF+E+VFQNWE++VQS+H
Sbjct: 376 TPLKLADYFKIPGVFNLGSIPTSPSGGNGGYLQSSVMAANFREFIEVVFQNWENSVQSWH 435
Query: 438 IDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSE 497
+ GYSFFVVGMDGGQWTP SR +YNLRD V+RST QVYPR+WTAIY+ALDNVGMWNIRSE
Sbjct: 436 VSGYSFFVVGMDGGQWTPGSRAKYNLRDAVSRSTVQVYPRAWTAIYIALDNVGMWNIRSE 495
Query: 498 NWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHTRP 542
NWARQYLGQQFYLRVY+ + S+RDE P PKNAL+CGRA+GRHTRP
Sbjct: 496 NWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALMCGRAKGRHTRP 540
|
|
| TAIR|locus:2199798 sks5 "SKU5 similar 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2015 (714.4 bits), Expect = 2.2e-208, P = 2.2e-208
Identities = 376/522 (72%), Positives = 427/522 (81%)
Query: 22 VYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPF 81
V + PYRFF W ITYGDIYPLGV+QQGILING FPGP I +VTNDNLII+VYN L EPF
Sbjct: 21 VTAEDPYRFFEWNITYGDIYPLGVRQQGILINGAFPGPDIHSVTNDNLIINVYNSLDEPF 80
Query: 82 LISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFG 141
L+SWNG+QQRRNS+ DGVYGTTCPIPPGKN+TY+LQ KDQIGS++YFPS FHKAAG FG
Sbjct: 81 LLSWNGIQQRRNSFVDGVYGTTCPIPPGKNYTYILQMKDQIGSFYYFPSLGFHKAAGGFG 140
Query: 142 GIRIWSRXXXXXXXXXXAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWN 201
GIRI SR AGD TVL GDWY++NH LR LD+G LP PDG+LINGR +
Sbjct: 141 GIRILSRPRIPVPFPDPAGDTTVLIGDWYKANHTDLRAQLDNGKKLPLPDGILINGRS-S 199
Query: 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTY 261
G T VE G+TYRFRISNVGL S+NFRIQ H MK+VEVEG+HTLQ T+++LD+H+GQ+Y
Sbjct: 200 GATLNVEQGKTYRFRISNVGLQDSLNFRIQDHKMKVVEVEGTHTLQTTFSSLDVHVGQSY 259
Query: 262 SVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQA 321
SVLVT DQ P+DYY+VVSSRFT VLTTT I YSNS GVSGPIPGGPT +I WSLNQA
Sbjct: 260 SVLVTADQTPRDYYVVVSSRFTSNVLTTTGIFRYSNSAGGVSGPIPGGPTIQIDWSLNQA 319
Query: 322 RSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPL 381
R+IR NL+ASGPRPNPQGSYHYGMI +RTI LA+SA ++GKQRYA+NSVSF PADTPL
Sbjct: 320 RAIRTNLSASGPRPNPQGSYHYGMINTTRTIRLASSAGQVDGKQRYAVNSVSFKPADTPL 379
Query: 382 KLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGY 441
K+ADYFKI GV+ GS+ P G YL TSVM ++R FVEI+F+N ED VQS+H+DGY
Sbjct: 380 KIADYFKIDGVYRSGSIQYQPTGGGIYLDTSVMQVDYRTFVEIIFENSEDIVQSWHLDGY 439
Query: 442 SFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWAR 501
SF+VVGMDGGQW+P SR YNLRD VAR T QVYP SWTAI +ALDNVGMWN+RSE WAR
Sbjct: 440 SFWVVGMDGGQWSPDSRNEYNLRDAVARCTVQVYPSSWTAILIALDNVGMWNLRSEFWAR 499
Query: 502 QYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHTRPL 543
QYLGQQ YLRVY+P+ S RDE PIPKNALLCGRA GR TRPL
Sbjct: 500 QYLGQQLYLRVYTPSTSLRDEYPIPKNALLCGRASGRSTRPL 541
|
|
| TAIR|locus:2033513 SKS6 "SKU5-similar 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1978 (701.3 bits), Expect = 1.8e-204, P = 1.8e-204
Identities = 360/522 (68%), Positives = 423/522 (81%)
Query: 22 VYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPF 81
V +SPYRFF W +TYGDIYPLGV+QQGILINGQFPGP I +VTNDNLII+V+N L EPF
Sbjct: 22 VTAESPYRFFDWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVHNSLDEPF 81
Query: 82 LISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFG 141
LISWNG+Q RRNS+ DG+YGTTCPIPP N+TY+LQ KDQIGS++YFPS FHKAAG FG
Sbjct: 82 LISWNGVQNRRNSYVDGMYGTTCPIPPRSNYTYILQVKDQIGSFYYFPSLAFHKAAGGFG 141
Query: 142 GIRIWSRXXXXXXXXXXAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWN 201
GIRI SR AGD+TVL GDWY+ NH L+ LD G LP PDG+LINGR N
Sbjct: 142 GIRILSRPGIPVPFADPAGDYTVLIGDWYKFNHTDLKSRLDRGRKLPSPDGILINGRS-N 200
Query: 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTY 261
G T VE G+TYR RISNVGL S+NFRIQ H MKLVEVEG+HTLQ +++LD+H+GQ+Y
Sbjct: 201 GATLNVEQGKTYRLRISNVGLQDSLNFRIQNHRMKLVEVEGTHTLQTMFSSLDVHVGQSY 260
Query: 262 SVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQA 321
SVL+T DQ+P+DYY+VVSSRFT +++TTT +L YS S SGPIPGGPT ++ WSLNQA
Sbjct: 261 SVLITADQSPRDYYVVVSSRFTDKIITTTGVLRYSGSSTPASGPIPGGPTIQVDWSLNQA 320
Query: 322 RSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPL 381
R+IR NLTASGPRPNPQGSYHYG+I + RTI +SA +NGKQRY +NSVSFVPADTPL
Sbjct: 321 RAIRTNLTASGPRPNPQGSYHYGLIPLIRTIVFGSSAGQINGKQRYGVNSVSFVPADTPL 380
Query: 382 KLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGY 441
KLAD+FKI GV+ + S+ P +G YL TSV+ ++R F+EIVF+N ED VQSYH++GY
Sbjct: 381 KLADFFKISGVYKINSISDKPTYGGLYLDTSVLQVDYRTFIEIVFENQEDIVQSYHLNGY 440
Query: 442 SFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWAR 501
SF+VVGMDGGQW SR YNLRD V+RST QVYP+SWTAIY+ALDNVGMWN+RSE WAR
Sbjct: 441 SFWVVGMDGGQWKTGSRNGYNLRDAVSRSTVQVYPKSWTAIYIALDNVGMWNLRSEFWAR 500
Query: 502 QYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHTRPL 543
QYLGQQ YLRV++ + S RDE PIPKN+ LCGRARGRHTRPL
Sbjct: 501 QYLGQQLYLRVFTSSTSLRDEYPIPKNSRLCGRARGRHTRPL 542
|
|
| TAIR|locus:2036911 sks8 "SKU5 similar 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1892 (671.1 bits), Expect = 2.4e-195, P = 2.4e-195
Identities = 348/519 (67%), Positives = 415/519 (79%)
Query: 22 VYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPF 81
V + PY+FF W +TYG+I PL V QQGILING+FPGP I AVTNDNLII+V+N+L EPF
Sbjct: 22 VAAEDPYKFFEWHVTYGNISPLKVAQQGILINGKFPGPDIAAVTNDNLIINVFNHLDEPF 81
Query: 82 LISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFG 141
LISW+G++ RNS+QDGVYGTTCPIPPGKN+TY LQ KDQIGS++YFPS FHKAAG FG
Sbjct: 82 LISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFG 141
Query: 142 GIRIWSRXXXXXXXXXXAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWN 201
IRI SR AGD+TVL GDWY++NH LR LD+G LPFPDG+LINGRG +
Sbjct: 142 AIRISSRPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGILINGRG-S 200
Query: 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTY 261
G T +EPG+TYR RISNVGL S+NFRIQ H MKLVEVEG+HT+Q +++LD+H+GQ+Y
Sbjct: 201 GATLNIEPGKTYRLRISNVGLQNSLNFRIQNHKMKLVEVEGTHTIQTPFSSLDVHVGQSY 260
Query: 262 SVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQA 321
SVL+T DQ +DYYIVVSSRFT ++L T +LHYSNS VSGPIP P ++ WS +QA
Sbjct: 261 SVLITADQPAKDYYIVVSSRFTSKILITAGVLHYSNSAGPVSGPIPEAPI-QLRWSFDQA 319
Query: 322 RSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPL 381
R+I+ NL ASGPRPNPQG+YHYG IK++RTI LA+SA +NGKQRYA+NS SF P DTPL
Sbjct: 320 RAIKTNLAASGPRPNPQGTYHYGKIKVTRTIKLASSAGNINGKQRYAVNSASFYPTDTPL 379
Query: 382 KLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGY 441
KLADYFKI GV+ GS+P P G Y TSVM +++ FVEIVF+NWED VQ++H+DGY
Sbjct: 380 KLADYFKIAGVYNPGSIPDQPTHGAIYPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGY 439
Query: 442 SFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWAR 501
SFFVVGM+ G+W+ ASR YNL D V+R T QVYPRSWTAIY++LDNVGMWN+RSE W R
Sbjct: 440 SFFVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWER 499
Query: 502 QYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHT 540
QYLGQQFY+RVY+P+ S RDE IPKNALLCGRA G HT
Sbjct: 500 QYLGQQFYMRVYTPSTSLRDEYLIPKNALLCGRATGHHT 538
|
|
| TAIR|locus:2201133 sks7 "SKU5 similar 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1859 (659.5 bits), Expect = 7.5e-192, P = 7.5e-192
Identities = 340/517 (65%), Positives = 413/517 (79%)
Query: 23 YGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFL 82
+ + PYRFF W +TYG+I PLGV QQGILING+FPGP I ++TNDNLII+V+N+L EPFL
Sbjct: 23 FAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISITNDNLIINVFNHLDEPFL 82
Query: 83 ISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGG 142
+SWNG++ +NS+QDGVYGT CPIPPGKN+TY LQ KDQIGS++YFPS FHKAAG FGG
Sbjct: 83 LSWNGIRNWKNSFQDGVYGTMCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGG 142
Query: 143 IRIWSRXXXXXXXXXXAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNG 202
IRI SR A D+T+L GDWY++NH L+ LD+G LP PDG+LINGR +G
Sbjct: 143 IRISSRALIPVPFPTPADDYTLLVGDWYKTNHKDLKAQLDNGGKLPLPDGILINGRS-SG 201
Query: 203 YTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYS 262
T +EPG+TYR RISNVGL S+NFRIQ H+MKLVEVEG +T+QN +++LD+H+GQ+YS
Sbjct: 202 ATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGRYTIQNLFSSLDVHVGQSYS 261
Query: 263 VLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQAR 322
VL+T DQ +DYY+VVSSRFT ++LTTT +LHYSNS VSGPIP GP +++WS NQAR
Sbjct: 262 VLITADQPAKDYYVVVSSRFTSKILTTTGVLHYSNSVAPVSGPIPDGPI-KLSWSFNQAR 320
Query: 323 SIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLK 382
+IR NLTASGPRPNPQGSY YG+I I+RTI LAN+ ++ GKQRYA+NS SF PADTPLK
Sbjct: 321 AIRTNLTASGPRPNPQGSYRYGVINITRTIRLANNLGHIEGKQRYAVNSASFYPADTPLK 380
Query: 383 LADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYS 442
L DYFKI GV+ GS+ P G + TSVM A+FR FVE++F+N ED VQS+H+DGYS
Sbjct: 381 LVDYFKIDGVYKPGSISDQPTNGAIFPTTSVMQADFRAFVEVIFENSEDIVQSWHLDGYS 440
Query: 443 FFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQ 502
F+VVGM+ G+W+PASR YNL D + R T QVYPRSWTAIY+ALDNVGMWN+RSE W RQ
Sbjct: 441 FYVVGMELGKWSPASRKVYNLNDAILRCTIQVYPRSWTAIYIALDNVGMWNMRSEIWERQ 500
Query: 503 YLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRH 539
YLGQQFY+RVY+ + S RDE IPKNALLCGRA H
Sbjct: 501 YLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRASSSH 537
|
|
| TAIR|locus:2121823 sks9 "SKU5 similar 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1845 (654.5 bits), Expect = 2.3e-190, P = 2.3e-190
Identities = 346/527 (65%), Positives = 410/527 (77%)
Query: 22 VYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPF 81
V D PYRFF W++TYG+I PLG+ Q+GILINGQ+PGP I +VTNDNLII+V+N L EPF
Sbjct: 23 VQADDPYRFFDWRVTYGNISPLGIPQRGILINGQYPGPDIYSVTNDNLIINVHNDLDEPF 82
Query: 82 LISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFG 141
L+SWNG+Q R+NS+QDGVYGTTCPIPPGKN+TY +Q KDQIGS+FYFPS HKAAG FG
Sbjct: 83 LLSWNGVQLRKNSYQDGVYGTTCPIPPGKNYTYAIQVKDQIGSFFYFPSLAVHKAAGGFG 142
Query: 142 GIRIWSRXXXXXXXXXXAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWN 201
G RI SR AGDFT L GDW++ +H VL+ +LD GH LP P G+LING+G +
Sbjct: 143 GFRILSRPRIPVPFPEPAGDFTFLIGDWFKHDHKVLKAILDRGHKLPLPQGVLINGQGVS 202
Query: 202 GYT-FTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQT 260
+ TV G+TYRFRISNVGL ++NFRIQGH MKLVEVEG+HT+Q+ Y +LDIH+GQ+
Sbjct: 203 YMSSITVHKGKTYRFRISNVGLQHTLNFRIQGHQMKLVEVEGTHTVQSMYTSLDIHVGQS 262
Query: 261 YSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPG----GPTTEIAW 316
YSVLVTMDQ QDY IVVS++F + L ++ +HYSNSR S P E+ W
Sbjct: 263 YSVLVTMDQPDQDYDIVVSTKFVAKKLLVSSTIHYSNSRHSHSSSANSVHVQQPADELDW 322
Query: 317 SLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVP 376
S+ QARSIR NLTASGPRPNPQGSYHYG IKISRT+ L +SA + KQRYAIN VSFVP
Sbjct: 323 SIKQARSIRTNLTASGPRPNPQGSYHYGRIKISRTLILESSAALVKRKQRYAINGVSFVP 382
Query: 377 ADTPLKLADYFKIPGVFTLGSMPTSPNWGNAY-LQTSVMAANFREFVEIVFQNWEDTVQS 435
DTPLKLADYFKI GVF +GS+P P G ++TSVM A+ R+F+EI+FQN E VQS
Sbjct: 383 GDTPLKLADYFKIKGVFKMGSIPDKPRRGRGMRMETSVMGAHHRDFLEIIFQNREKIVQS 442
Query: 436 YHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIR 495
YH+DGYSF+VVG D G W+ ASR YNLRD ++RSTTQVYP SWTA+Y+ALDNVGMWN+R
Sbjct: 443 YHLDGYSFWVVGTDRGTWSKASRREYNLRDAISRSTTQVYPESWTAVYVALDNVGMWNLR 502
Query: 496 SENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHTRP 542
SE WARQYLGQQFYLRVYSP +S RDE +PKNALLCGRA +HT P
Sbjct: 503 SEYWARQYLGQQFYLRVYSPTHSLRDEYLLPKNALLCGRASNKHTTP 549
|
|
| TAIR|locus:2132927 sks10 "SKU5 similar 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1648 (585.2 bits), Expect = 1.7e-169, P = 1.7e-169
Identities = 309/515 (60%), Positives = 392/515 (76%)
Query: 30 FFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQ 89
F+ W++TYG I + ++GILINGQFPGP+I ++TNDNL+I+V N L +PFL+SWNG+
Sbjct: 29 FYNWRVTYGKIALDTLPRRGILINGQFPGPEIRSLTNDNLVINVQNDLDDPFLLSWNGVH 88
Query: 90 QRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRX 149
R+NS+QDGVYGT CPIPPGKN+TY Q KDQ+GSYFYFPS KAAG +G +RI+S
Sbjct: 89 MRKNSYQDGVYGTNCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLP 148
Query: 150 XXXXXXXXXAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPF-PDGLLINGRGWNG-YTFTV 207
A DFT L DWYR NH L+++LD G LP PDG++ING+G + Y+ TV
Sbjct: 149 RIPVPFPEPAEDFTFLVNDWYRRNHTTLKKILDGGRKLPLMPDGVMINGQGVSTVYSITV 208
Query: 208 EPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTM 267
+ G+TYRFR+SNVGL TS+N I GH +KL+EVEG+HT+Q Y +LDIH+GQTYS LVTM
Sbjct: 209 DKGKTYRFRVSNVGLQTSLNLEILGHQLKLIEVEGTHTVQTMYTSLDIHVGQTYSFLVTM 268
Query: 268 DQAPQDYYIVVSSRFTPRVLTTTAILHYSNSR--RGVSGPIPGGPTTEIAWSLNQARSIR 325
DQ PQ+Y IVVS+RF + A LHYSNS+ + ++ P P ++ WS+ QA+SIR
Sbjct: 269 DQPPQNYSIVVSTRFINAEVVIRATLHYSNSKGHKIITARRPD-PD-DVEWSIKQAQSIR 326
Query: 326 WNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLAD 385
NLTASGPR NPQGSYHYG +KISRT+ L +SA + KQRYAIN VSFVP+DTPLKLAD
Sbjct: 327 TNLTASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDTPLKLAD 386
Query: 386 YFKIPGVFTLGSMPTSPNWGNAY-LQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFF 444
+FKI VF +G++P P G L T+VM A+ F+EI+FQN E VQSYH+DGY+F+
Sbjct: 387 HFKIKDVFKVGTIPDKPRRGGGIRLDTAVMGAHHNAFLEIIFQNREKIVQSYHLDGYNFW 446
Query: 445 VVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYL 504
VVG++ G W+ ASR YNL+D ++RSTTQVYP+SWTA+Y+ALDNVGMWN+RS+ WARQYL
Sbjct: 447 VVGINKGIWSRASRREYNLKDAISRSTTQVYPKSWTAVYVALDNVGMWNLRSQFWARQYL 506
Query: 505 GQQFYLRVYSPANSWRDELPIPKNALLCGRARGRH 539
GQQFYLRV+SP +S +DE P+PKNALLCGRA ++
Sbjct: 507 GQQFYLRVHSPNHSPKDEYPLPKNALLCGRASNKN 541
|
|
| TAIR|locus:2174954 sks17 "SKU5 similar 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1600 (568.3 bits), Expect = 2.1e-164, P = 2.1e-164
Identities = 292/518 (56%), Positives = 383/518 (73%)
Query: 22 VYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPF 81
V G+SPY+F+TW +TYG I PLGV QQ ILINGQFPGP+++ VTNDN+I+++ N L +PF
Sbjct: 30 VKGESPYKFYTWTVTYGIISPLGVPQQVILINGQFPGPKLEVVTNDNIILNLINKLDQPF 89
Query: 82 LISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFG 141
L++WNG++QR+NSWQDGV GT CPI P NFTY Q KDQIG++ YFPS FHKAAG FG
Sbjct: 90 LLTWNGIKQRKNSWQDGVLGTNCPIQPNSNFTYKFQTKDQIGTFNYFPSTAFHKAAGGFG 149
Query: 142 GIRIWSRXXXXXXXXXXAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWN 201
I +++R DFT+L GDW+++NH L++ LDSG LPFPDG+LING+ +
Sbjct: 150 AINVYARPGIPIPYPLPTADFTLLVGDWFKTNHKTLQQRLDSGGVLPFPDGMLINGQTQS 209
Query: 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTY 261
TF+ + G+TY RISNVGL+++ NFRIQGH+MK+VEVEGSH +Q Y +LDIH+GQ+
Sbjct: 210 --TFSGDQGKTYMLRISNVGLSSTFNFRIQGHTMKVVEVEGSHVIQTDYDSLDIHVGQSL 267
Query: 262 SVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQA 321
+VLVT++Q+P+DYYIV S+RF L+ +L YSNSR SG P P E+ WS+ QA
Sbjct: 268 AVLVTLNQSPKDYYIVASTRFIRSKLSVMGLLRYSNSRVPASGDPPALPPGELVWSMRQA 327
Query: 322 RSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPL 381
R+ RWNLTA+ RPNPQGS+HYGMI ++T +NSAP +NGKQRYA+N VS+V ++TPL
Sbjct: 328 RTFRWNLTANAARPNPQGSFHYGMISPTKTFVFSNSAPLINGKQRYAVNGVSYVKSETPL 387
Query: 382 KLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGY 441
KLAD+F I GVF+ ++ + P+ + TSV+ + +F+EIVFQN E ++QS+H+DGY
Sbjct: 388 KLADHFGISGVFSTNAIQSVPSNSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGY 447
Query: 442 SFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWAR 501
F+VVG GQWTPA R+ +NL D + R TTQVYP SWT I ++LDN GMWN+RS W R
Sbjct: 448 DFWVVGFGSGQWTPAKRSLHNLVDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWER 507
Query: 502 QYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRH 539
QY GQQFYL+V++ S +E P N LCG+A GRH
Sbjct: 508 QYSGQQFYLKVWNSVQSLANEYNPPDNLQLCGKAVGRH 545
|
|
| TAIR|locus:2092865 sks13 "SKU5 similar 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1494 (531.0 bits), Expect = 3.6e-153, P = 3.6e-153
Identities = 281/522 (53%), Positives = 358/522 (68%)
Query: 24 GDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLI 83
GD PY ++TW +TYG PLG+ QQ ILINGQFPGP +++ +N+N++I+V+N L EPFL+
Sbjct: 23 GD-PYFYYTWNVTYGTAAPLGIPQQVILINGQFPGPNLNSTSNNNVVINVFNNLDEPFLL 81
Query: 84 SWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGI 143
+W+GLQ R+NSWQDGV GT+CPIP G NFTY Q KDQIGSYFY+PS H+ AG FGG+
Sbjct: 82 TWSGLQHRKNSWQDGVTGTSCPIPAGTNFTYHFQPKDQIGSYFYYPSTALHRFAGGFGGL 141
Query: 144 RIWSRXXXXXXXXXXAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGR----- 198
R+ SR D T+L DWY +H L+ LDSG L PDG+LING+
Sbjct: 142 RVNSRLLIPVPYADPEDDRTILINDWYAKSHTALKNFLDSGRTLGSPDGVLINGKSGKLG 201
Query: 199 GWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLG 258
G N FT++PG+TY++RI NVG +++NFRIQGH MKLVE+EGSH LQN Y +LD+H+G
Sbjct: 202 GNNAPLFTMKPGKTYKYRICNVGFKSTLNFRIQGHKMKLVEMEGSHVLQNDYDSLDVHVG 261
Query: 259 QTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSL 318
Q ++VLVT DQ ++YY+V S+RF + ++T ++ Y S S IP P AWSL
Sbjct: 262 QCFAVLVTADQVAKNYYMVASTRFLKKEVSTVGVMSYEGSNVQASSDIPKAPVGW-AWSL 320
Query: 319 NQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPAD 378
NQ RS RWNLTAS RPNPQGSYHYG I I+RTI LAN+ +NGK R+ N VS V +
Sbjct: 321 NQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLANTKNLVNGKVRFGFNGVSHVDTE 380
Query: 379 TPLKLADYFKIPG-VFTLGSMPTSP--NWGNAYLQTSVMAANFREFVEIVFQNWEDTVQS 435
TPLKLA+YF + VF + P ++ +V+ FR FVE+VF+N E ++QS
Sbjct: 381 TPLKLAEYFGMSEKVFKYNVIKDEPAAKITTLTVEPNVLNITFRTFVEVVFENHEKSMQS 440
Query: 436 YHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIR 495
+H+DGYSFF V + G+WTP R YNL D V+R T QVYP+SW+AI + DN GMWNIR
Sbjct: 441 FHLDGYSFFAVASEPGRWTPEKRNNYNLLDAVSRHTVQVYPKSWSAILLTFDNAGMWNIR 500
Query: 496 SENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARG 537
SENW R+YLGQQ Y+ V SP S RDE IP N LCG +G
Sbjct: 501 SENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCGIVKG 542
|
|
| TAIR|locus:2115154 sks15 "SKU5 similar 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
Identities = 282/523 (53%), Positives = 364/523 (69%)
Query: 22 VYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPF 81
V + PY F+TW +TYG PLGV QQ ILINGQFPGP I+AVTN+N+++++ N L EPF
Sbjct: 24 VNAEDPYMFYTWTVTYGTRSPLGVPQQVILINGQFPGPAIEAVTNNNIVVNLINKLDEPF 83
Query: 82 LISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFG 141
LI+WNG++QRR SWQDGV GT CPI P N+TY Q KDQIG+Y YF S H+A+GAFG
Sbjct: 84 LITWNGVKQRRTSWQDGVLGTNCPIQPNSNWTYQFQLKDQIGTYTYFASTSLHRASGAFG 143
Query: 142 GIRIWSRXXXXXXXXXXAGDFTVLAGDWYRS-NHYVLRRLLDSGHNLPFPDGLLINGRGW 200
+ I R GDFT+L DW+ + H LR+ LD+G LP PD LLING
Sbjct: 144 ALNINQRSVITTPYPTPDGDFTLLVSDWFSNMTHKDLRKSLDAGSALPLPDALLINGVS- 202
Query: 201 NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQT 260
G FT + G+TY+FR+SNVG+ TSINFRIQ H+M L+EVEG+HTLQ +Y +LD+H+GQ+
Sbjct: 203 KGLIFTGQQGKTYKFRVSNVGIATSINFRIQNHTMSLIEVEGAHTLQESYESLDVHVGQS 262
Query: 261 YSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQ 320
+VLVT+ + +DY+IV S+RFT VLTTTA L Y S+ GP+P GPT I WS+ Q
Sbjct: 263 MTVLVTLKASVRDYFIVASTRFTKPVLTTTASLRYQGSKNAAYGPLPIGPTYHIHWSMKQ 322
Query: 321 ARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTP 380
AR+IR NLTA+ RPNPQGS+HYG I I+RT+ LAN+A + GK RY +N +S++ TP
Sbjct: 323 ARTIRMNLTANAARPNPQGSFHYGTIPINRTLVLANAATLIYGKLRYTVNRISYINPTTP 382
Query: 381 LKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDG 440
LKLAD++ I GVF ++ ++P G A++ TSV+ EFVEIVFQN E ++QS+H+DG
Sbjct: 383 LKLADWYNISGVFDFKTIISTPTTGPAHIGTSVIDVELHEFVEIVFQNDERSIQSWHMDG 442
Query: 441 YSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWA 500
S + VG G W R RYNL D V R T QVYP SWT I ++LDN GMWN+RS+ W+
Sbjct: 443 TSAYAVGYGSGTWNVTMRKRYNLVDAVPRHTFQVYPLSWTTILVSLDNKGMWNLRSQIWS 502
Query: 501 RQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHTRPL 543
R+YLGQ+ Y+RV++ S E P N L CG+A+ RPL
Sbjct: 503 RRYLGQELYVRVWNDEKSLYTEAEPPLNVLYCGKAK----RPL 541
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P29162 | ASOL_TOBAC | 1, ., 1, 0, ., 3, ., - | 0.5184 | 0.9686 | 0.9494 | N/A | no |
| Q00624 | ASOL_BRANA | 1, ., 1, 0, ., 3, ., - | 0.5412 | 0.9410 | 0.9207 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.10.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
 |
 |
 |
 |
 |
 |
 |
 |
||
 | eugene3.02520012 | SubName- Full=Putative uncharacterized protein; (545 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 543 | |||
| PLN02991 | 543 | PLN02991, PLN02991, oxidoreductase | 0.0 | |
| PLN02835 | 539 | PLN02835, PLN02835, oxidoreductase | 0.0 | |
| PLN02792 | 536 | PLN02792, PLN02792, oxidoreductase | 0.0 | |
| PLN02354 | 552 | PLN02354, PLN02354, copper ion binding / oxidoredu | 0.0 | |
| PLN02168 | 545 | PLN02168, PLN02168, copper ion binding / pectinest | 0.0 | |
| PLN00044 | 596 | PLN00044, PLN00044, multi-copper oxidase-related p | 0.0 | |
| TIGR03388 | 541 | TIGR03388, ascorbase, L-ascorbate oxidase, plant t | 6e-64 | |
| TIGR03389 | 539 | TIGR03389, laccase, laccase, plant | 2e-58 | |
| PLN02604 | 566 | PLN02604, PLN02604, oxidoreductase | 1e-57 | |
| PLN02191 | 574 | PLN02191, PLN02191, L-ascorbate oxidase | 1e-55 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 5e-47 | |
| pfam07732 | 119 | pfam07732, Cu-oxidase_3, Multicopper oxidase | 1e-42 | |
| pfam07731 | 135 | pfam07731, Cu-oxidase_2, Multicopper oxidase | 2e-33 | |
| TIGR03390 | 538 | TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu | 3e-26 | |
| COG2132 | 451 | COG2132, SufI, Putative multicopper oxidases [Seco | 1e-18 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 1e-13 |
| >gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase | Back alignment and domain information |
|---|
Score = 785 bits (2028), Expect = 0.0
Identities = 357/519 (68%), Positives = 425/519 (81%), Gaps = 2/519 (0%)
Query: 22 VYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPF 81
V + PYRFF W +TYG+I PLGV QQGILING+FPGP I +VTNDNLII+V+N+L EPF
Sbjct: 22 VAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNHLDEPF 81
Query: 82 LISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFG 141
LISW+G++ RNS+QDGVYGTTCPIPPGKN+TY LQ KDQIGS++YFPS FHKAAG FG
Sbjct: 82 LISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFG 141
Query: 142 GIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWN 201
IRI SRP IPVPFP PA D+TVL GDWY++NH LR LD+G LP PDG+LINGRG +
Sbjct: 142 AIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLDNGGKLPLPDGILINGRG-S 200
Query: 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTY 261
G T +EPG+TYR RISNVGL S+NFRIQ H+MKLVEVEG+HT+Q +++LD+H+GQ+Y
Sbjct: 201 GATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSY 260
Query: 262 SVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQA 321
SVL+T DQ +DYYIVVSSRFT ++L TT +LHYSNS VSGPIP GP +++WS +QA
Sbjct: 261 SVLITADQPAKDYYIVVSSRFTSKILITTGVLHYSNSAGPVSGPIPDGPI-QLSWSFDQA 319
Query: 322 RSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPL 381
R+I+ NLTASGPRPNPQGSYHYG I I+RTI LANSA + GKQRYA+NS SF PADTPL
Sbjct: 320 RAIKTNLTASGPRPNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNSASFYPADTPL 379
Query: 382 KLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGY 441
KLADYFKI GV+ GS+P P G + TSVM +++ FVEIVF+NWED VQ++H+DGY
Sbjct: 380 KLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDIVQTWHLDGY 439
Query: 442 SFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWAR 501
SF+VVGM+ G+W+ ASR YNL D V+R T QVYPRSWTAIY++LDNVGMWN+RSE W R
Sbjct: 440 SFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWER 499
Query: 502 QYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHT 540
QYLGQQFY+RVY+ + S RDE IPKNALLCGRA G HT
Sbjct: 500 QYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATGHHT 538
|
Length = 543 |
| >gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase | Back alignment and domain information |
|---|
Score = 770 bits (1989), Expect = 0.0
Identities = 331/535 (61%), Positives = 428/535 (80%), Gaps = 4/535 (0%)
Query: 6 VLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVT 65
+L ++A+L S+++ V G+ PY+++TW +TYG I PLGV QQ ILINGQFPGP++D VT
Sbjct: 9 LLLGVLAVLSSVSL--VNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVT 66
Query: 66 NDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSY 125
NDN+I+++ N L +PFL++WNG++QR+NSWQDGV GT CPIPP N+TY Q KDQIG++
Sbjct: 67 NDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTF 126
Query: 126 FYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGH 185
YFPS LFHKAAG FG I ++ RPRIP+PFP P GDFT+L GDWY+++H L++ LDSG
Sbjct: 127 TYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQRLDSGK 186
Query: 186 NLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT 245
LPFPDG+LING+ + TF+ + G+TY FRISNVGL+TS+NFRIQGH+MKLVEVEGSHT
Sbjct: 187 VLPFPDGVLINGQTQS--TFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHT 244
Query: 246 LQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGP 305
+QN Y +LD+H+GQ+ +VLVT++Q+P+DYYIV S+RFT ++LT TA+LHYSNSR SGP
Sbjct: 245 IQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGP 304
Query: 306 IPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQ 365
+P P+ E+ WS+ QAR+ RWNLTAS RPNPQGS+HYG I ++TI LANSAP +NGKQ
Sbjct: 305 LPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLINGKQ 364
Query: 366 RYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIV 425
RYA+N VS+V +DTPLKLADYF IPGVF++ S+ + P+ G A++ TSVM + +F+E+V
Sbjct: 365 RYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDFLEVV 424
Query: 426 FQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMA 485
FQN E T+QS+H+DGY F+VVG GQWTPA R+ YNL D + R T QVYP+SWT I ++
Sbjct: 425 FQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVS 484
Query: 486 LDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHT 540
LDN GMWN+RS W RQYLGQQFYLRV++ +S +E IP NALLCG+A GRH
Sbjct: 485 LDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIGRHP 539
|
Length = 539 |
| >gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase | Back alignment and domain information |
|---|
Score = 747 bits (1930), Expect = 0.0
Identities = 329/522 (63%), Positives = 408/522 (78%), Gaps = 4/522 (0%)
Query: 22 VYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPF 81
V D F+ W++TYG+I L + ++GILINGQFPGP+I ++TNDNL+I+V+N L EPF
Sbjct: 11 VKADDTL-FYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPF 69
Query: 82 LISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFG 141
L+SWNG+ R+NS+QDGVYGTTCPIPPGKN+TY Q KDQ+GSYFYFPS KAAG +G
Sbjct: 70 LLSWNGVHMRKNSYQDGVYGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYG 129
Query: 142 GIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLP-FPDGLLINGRGW 200
+RI+S PRIPVPFP PAGDFT L GDWYR NH L+++LD G LP PDG++ING+G
Sbjct: 130 SLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKKILDGGRKLPLMPDGVMINGQGV 189
Query: 201 NG-YTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQ 259
+ Y+ TV+ G+TYRFRISNVGL TS+NF I GH +KL+EVEG+HT+Q+ Y +LDIH+GQ
Sbjct: 190 SYVYSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQ 249
Query: 260 TYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLN 319
TYSVLVTMDQ PQ+Y IVVS+RF + ++ LHYSNS+ ++ WS+
Sbjct: 250 TYSVLVTMDQPPQNYSIVVSTRFIAAKVLVSSTLHYSNSKGHKIIHARQPDPDDLEWSIK 309
Query: 320 QARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADT 379
QA+SIR NLTASGPR NPQGSYHYG +KISRT+ L +SA + KQRYAIN VSFVP+DT
Sbjct: 310 QAQSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDT 369
Query: 380 PLKLADYFKIPGVFTLGSMPTSPNWGNAY-LQTSVMAANFREFVEIVFQNWEDTVQSYHI 438
PLKLAD+FKI GVF +GS+P P G L TSVM A+ F+EI+FQN E VQSYH+
Sbjct: 370 PLKLADHFKIKGVFKVGSIPDKPRRGGGMRLDTSVMGAHHNAFLEIIFQNREKIVQSYHL 429
Query: 439 DGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSEN 498
DGY+F+VVG++ G W+ ASR YNL+D ++RSTTQVYP SWTA+Y+ALDNVGMWN+RS+
Sbjct: 430 DGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPESWTAVYVALDNVGMWNLRSQF 489
Query: 499 WARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHT 540
WARQYLGQQFYLRVYSP +S +DE P+PKNALLCGRA ++
Sbjct: 490 WARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRASNKNM 531
|
Length = 536 |
| >gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Score = 735 bits (1898), Expect = 0.0
Identities = 311/546 (56%), Positives = 387/546 (70%), Gaps = 12/546 (2%)
Query: 1 MRDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQ 60
M R+L L+ L + V + PY FFTW +TYG PLGV QQ ILINGQFPGP
Sbjct: 1 MMGGRLLAVLL-CLAAAVALVVRAEDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPN 59
Query: 61 IDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKD 120
I++ +N+N++I+V+N L EPFL++W+G+QQR+NSWQDGV GT CPIPPG NFTY Q KD
Sbjct: 60 INSTSNNNIVINVFNNLDEPFLLTWSGIQQRKNSWQDGVPGTNCPIPPGTNFTYHFQPKD 119
Query: 121 QIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL 180
QIGSYFY+PS H+AAG FGG+R+ SR IPVP+ P D+TVL GDWY +H L++
Sbjct: 120 QIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTALKKF 179
Query: 181 LDSGHNLPFPDGLLINGR-----GWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSM 235
LDSG L PDG+LING+ G + FT++PG+TYR+RI NVGL +S+NFRIQGH M
Sbjct: 180 LDSGRTLGRPDGVLINGKSGKGDGKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKM 239
Query: 236 KLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHY 295
KLVE+EGSH LQN Y +LD+H+GQ +SVLVT +QAP+DYY+V S+RF +VLTTT I+ Y
Sbjct: 240 KLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQAPKDYYMVASTRFLKKVLTTTGIIRY 299
Query: 296 SNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLA 355
+ S +P P AWSLNQ RS RWNLTAS RPNPQGSYHYG I I+RTI L
Sbjct: 300 EGGKGPASPELPEAPVG-WAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLV 358
Query: 356 NSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIP-GVF---TLGSMPTSPNWGNAYLQT 411
NSA ++GK RYA+N VS V +TPLKLA+YF + VF T+ P +Q
Sbjct: 359 NSASKVDGKLRYALNGVSHVDPETPLKLAEYFGVADKVFKYDTIKDNPP-AKITKIKIQP 417
Query: 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARST 471
+V+ FR FVEI+F+N E ++QS+H+DGYSFF V ++ G WTP R YNL D V+R T
Sbjct: 418 NVLNITFRTFVEIIFENHEKSMQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHT 477
Query: 472 TQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALL 531
QVYP+SW AI + DN GMWNIRSENW R+YLGQQ Y V SP S RDE +P+NALL
Sbjct: 478 VQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMPENALL 537
Query: 532 CGRARG 537
CG+ +G
Sbjct: 538 CGKVKG 543
|
Length = 552 |
| >gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Score = 596 bits (1538), Expect = 0.0
Identities = 269/542 (49%), Positives = 350/542 (64%), Gaps = 17/542 (3%)
Query: 6 VLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVT 65
VL SL+ L LS Y +P + W ++Y + LG +Q I+IN FPGP ++A
Sbjct: 10 VLISLVILELS------YAFAPIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATA 63
Query: 66 NDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSY 125
ND + ++++N L EPFL++WNGLQ R+NSWQDGV GT CPI PG N+TY Q KDQIGSY
Sbjct: 64 NDVINVNIFNNLTEPFLMTWNGLQLRKNSWQDGVRGTNCPILPGTNWTYRFQVKDQIGSY 123
Query: 126 FYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGH 185
FYFPS L KAAG +G IRI++ +PVPFP P ++ +L GDW+ ++H V+R LD+GH
Sbjct: 124 FYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRASLDNGH 183
Query: 186 NLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT 245
+LP PDG+L NGRG F EPG+TYR RISNVGL T +NFRIQ H M LVE EG++
Sbjct: 184 SLPNPDGILFNGRGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYV 243
Query: 246 LQNTYAALDIHLGQTYSVLVTMDQAP----QDYYIVVSSRFTPRVLTTTAILHYSNSRRG 301
+ Y++LDIH+GQ+YSVLVT P + YYIV ++RFT L A++ Y NS
Sbjct: 244 QKRVYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTDAYLGGVALIRYPNSPLD 303
Query: 302 VSGPIPGGPTT-EIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPY 360
GP+P P + S+ QA SIR +L R NPQGSYHYG I ++RTI L N
Sbjct: 304 PVGPLPLAPALHDYFSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVML 363
Query: 361 MNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFRE 420
+GK RY IN VSFV TPLKL D+F++ G P P+ L TSV+ ++++
Sbjct: 364 SSGKLRYTINGVSFVYPGTPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKD 423
Query: 421 FVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWT 480
F IVFQN +++SYHIDGY+FFVVG G W+ + + YNL D V+RST QVYP SWT
Sbjct: 424 FYHIVFQNPLFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWT 483
Query: 481 AIYMALDNVGMWNIRSENWARQYLGQQFYLRVY-----SPAN-SWRDELPIPKNALLCGR 534
AI +A+DN GMWN+RS+ + YLGQ+ Y+RV P+ RDE PIP N + CG+
Sbjct: 484 AILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPIPGNVIRCGK 543
Query: 535 AR 536
Sbjct: 544 VS 545
|
Length = 545 |
| >gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Score = 533 bits (1374), Expect = 0.0
Identities = 279/548 (50%), Positives = 359/548 (65%), Gaps = 25/548 (4%)
Query: 10 LIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLG--VKQQGILINGQFPGPQIDAVTND 67
L+A L+LA PY ++ W+++Y PLG KQ+ I INGQFPGP ++ TN
Sbjct: 9 LLAAALALAPAPAGAGDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVTTNW 68
Query: 68 NLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFY 127
NL+++V N L EP L++W+G+QQR+++WQDGV GT C IP G N+TY Q KDQ+GS+FY
Sbjct: 69 NLVVNVRNALDEPLLLTWHGVQQRKSAWQDGVGGTNCAIPAGWNWTYQFQVKDQVGSFFY 128
Query: 128 FPSFLFHKAAGAFGGIRIWSRPRIPVPFP-PPAGDFTVLAGDWYRSNHYVLRRLLDSGHN 186
PS H+AAG +G I I +R IP+PF P GD T+ DWY +H LRR LD+G
Sbjct: 129 APSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALRRALDAGDL 188
Query: 187 LPFPDGLLINGRGWNGYTFT------------VEPGRTYRFRISNVGLTTSINFRIQGHS 234
L PDG+LIN G Y + V+PG+TYRFR+ NVG+ TS+NFRIQGH+
Sbjct: 189 LGAPDGVLINAFGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHN 248
Query: 235 MKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ-APQDYYIVVSSRFTPRV----LTT 289
+ LVE EGS+T Q Y LDIH+GQ+YS L+TMDQ A DYY+V S+RF LT
Sbjct: 249 LLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTG 308
Query: 290 TAILHYSNSRRGVSGPIPGGPTTE--IAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIK 347
AILHYSNS+ SGP+P P + A+S+NQARSIRWN+TASG RPNPQGS+HYG I
Sbjct: 309 VAILHYSNSQGPASGPLPDAPDDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDIT 368
Query: 348 ISRTITLANSAP-YMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGN 406
++ L + AP ++GK R +N +S++ TPL LA F +PGVF L P P
Sbjct: 369 VTDVYLLQSMAPELIDGKLRATLNEISYIAPSTPLMLAQIFNVPGVFKL-DFPNHPMNRL 427
Query: 407 AYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDT 466
L TS++ ++ F+EI+FQN VQSYH+DGY+FFVVGMD G WT SR YN D
Sbjct: 428 PKLDTSIINGTYKGFMEIIFQNNATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDG 487
Query: 467 VARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPA-NSWRDELPI 525
VARST QV+P +WTAI + LDN G+WN+R EN YLGQ+ Y+ V +P NS + LPI
Sbjct: 488 VARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPI 547
Query: 526 PKNALLCG 533
P NA+ CG
Sbjct: 548 PDNAIFCG 555
|
Length = 596 |
| >gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Score = 217 bits (555), Expect = 6e-64
Identities = 151/521 (28%), Positives = 231/521 (44%), Gaps = 76/521 (14%)
Query: 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNG 87
R + W++ Y P ++ I INGQFPGP I A D +++ + N L E +I W+G
Sbjct: 2 RHYKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHG 61
Query: 88 LQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIW 146
++Q W DG G T C I PG+ F Y D+ G+YFY + ++AG +G + +
Sbjct: 62 IRQIGTPWADGTAGVTQCAINPGETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVD 120
Query: 147 SRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPF-----PDGLLINGRG-- 199
PF G+F +L DW+ + + L S P P LLINGRG
Sbjct: 121 VPDGEKEPFHYD-GEFNLLLSDWWHKSIHEQEVGLSS---KPMRWIGEPQSLLINGRGQF 176
Query: 200 -----------------------WNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMK 236
VEPG+TYR RI++ ++NF I+GH +
Sbjct: 177 NCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLT 236
Query: 237 LVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAP-QDYYIVVSSRF-TPRVLTTTAILH 294
+VE +G++ T +DI+ G+TYSVL+T DQ P ++Y+I V R P +L+
Sbjct: 237 VVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNTPPGLTVLN 296
Query: 295 Y--SNSRRGVSGPIPGGPT-TEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRT 351
Y ++ R P P P + S + +I A G P+ S R
Sbjct: 297 YYPNSPSRLPPTPPPVTPAWDDFDRSKAFSLAI---KAAMGSPKPPETS--------DRR 345
Query: 352 ITLANSAPYMNGKQRYAINSVSFVPADTP--------LKLADYFKIPG-----VFTLGSM 398
I L N+ +NG ++AIN+VS TP L A K P + +
Sbjct: 346 IVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYDIFKP 405
Query: 399 PTSPNWGNAYLQTSVMAANFREFVEIVFQNWE------DTVQSYHIDGYSFFVVGMDGGQ 452
P +P N + F V+++ QN +H+ G+ F+V+G G+
Sbjct: 406 PPNP---NTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLGYGEGK 462
Query: 453 WTPASRTR-YNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492
+ P + YNL++ R+T ++P WTA+ DN G+W
Sbjct: 463 FRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVW 503
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. Length = 541 |
| >gnl|CDD|234194 TIGR03389, laccase, laccase, plant | Back alignment and domain information |
|---|
Score = 203 bits (517), Expect = 2e-58
Identities = 157/508 (30%), Positives = 240/508 (47%), Gaps = 56/508 (11%)
Query: 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGL 88
R +T+ + ++ L + + +NG+FPGP + A D +I++V N ++ I W+G+
Sbjct: 4 RHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGV 63
Query: 89 QQRRNSWQDG-VYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWS 147
+Q RN W DG Y T CPI PG+++ Y Q G+ ++ + +A +G I I
Sbjct: 64 RQLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLRAT-VYGAIVILP 122
Query: 148 RPRIPVPFPPPAGDFTVLAGDWYRSN-HYVLRRLLDSGHNLPFPDGLLINGR-------- 198
+P +P PFP P + ++ G+W+ ++ V+ + +G D ING
Sbjct: 123 KPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNCS 182
Query: 199 GWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLG 258
+ + TVEPG+TY RI N L + F I H++ +VEV+ ++T + I G
Sbjct: 183 SKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPG 242
Query: 259 QTYSVLVTMDQAPQDYYIVVSSRFTPRV----LTTTAILHY---SNSRRGVSGPIPGGPT 311
QT +VL+T DQ+P Y++ TTTAIL Y SNS + + +P
Sbjct: 243 QTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYND 302
Query: 312 TEIAWS-LNQARSIRWNLTASGPRPNPQGSYHYGMIKISR----TITLA------NSAPY 360
T A + N+ RS+ +A P P I R TI L N+
Sbjct: 303 TAAATNFSNKLRSLN---SAQYPANVPV--------TIDRRLFFTIGLGLDPCPNNTCQG 351
Query: 361 MNGKQRYA-INSVSFVPADTPLKLADYFKIPGVFTL---GSMPTSPNW-GN---AYLQTS 412
NG + A +N++SFV T L A YF I GVFT + PT N+ G L T+
Sbjct: 352 PNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNLFTT 411
Query: 413 ----VMAANFREFVEIVFQNWED-TVQSY--HIDGYSFFVVGMDGGQWTPASRT-RYNLR 464
V+ F VE+V Q+ +++ H+ GY+FFVVG G + P ++NL
Sbjct: 412 NGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLV 471
Query: 465 DTVARSTTQVYPRSWTAIYMALDNVGMW 492
D R+T V W AI DN G+W
Sbjct: 472 DPPERNTVGVPTGGWAAIRFVADNPGVW 499
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539 |
| >gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 1e-57
Identities = 164/541 (30%), Positives = 248/541 (45%), Gaps = 74/541 (13%)
Query: 6 VLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVT 65
L L+ +L+ ++ R + W++ Y P K+ I ING+ PGP I A
Sbjct: 6 ALFFLLFSVLNFPA----AEARIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQ 61
Query: 66 NDNLIISVYN-YLREPFLISWNGLQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIG 123
D +I+ + N L E I W+G++Q W DG G T CPI PG+ FTY D+ G
Sbjct: 62 GDTVIVELKNSLLTENVAIHWHGIRQIGTPWFDGTEGVTQCPILPGETFTYEFVV-DRPG 120
Query: 124 SYFYFPSFLFHKAAGAFGGIRIWSRPR-IPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLD 182
+Y Y + + AG +G IR+ S PR PF D +++ DWY + Y L
Sbjct: 121 TYLYHAHYGMQREAGLYGSIRV-SLPRGKSEPFSYDY-DRSIILTDWYHKSTYEQALGLS 178
Query: 183 SGHNLPF-----PDGLLINGRG-----------------------WNGYTFTVEPGRTYR 214
S +PF P LLI G+G + Y TV PG+TYR
Sbjct: 179 S---IPFDWVGEPQSLLIQGKGRYNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKTYR 235
Query: 215 FRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDY 274
RIS++ ++++F+I+GH+M +VE +G + L I+ G+TYSVLV DQ P
Sbjct: 236 LRISSLTALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRN 295
Query: 275 YIVVSSRFT--PRVLTTTAILHY--SNSRRGVSGPIPGGPT-TEIAWSLNQARSIRWNLT 329
Y V +S + AI +Y ++ RR P GP ++ LNQ+ +I+
Sbjct: 296 YWVTTSVVSRNNTTPPGLAIFNYYPNHPRRSPPTVPPSGPLWNDVEPRLNQSLAIKAR-- 353
Query: 330 ASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKI 389
G H + R I L N+ +NG +R+++N+VSF TP +A +
Sbjct: 354 --------HGYIHPPPLTSDRVIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALKENL 405
Query: 390 PGVFTLGSMPTS-----------PNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQS--- 435
G F P PN NA S+ F V+I+ QN +
Sbjct: 406 TGAFDQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSE 465
Query: 436 ---YHIDGYSFFVVGMDGGQWTPASRTR-YNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491
+H+ G+ F+V+G G++ +S + YNL D + ++T V+P WTA+ DN G+
Sbjct: 466 THPWHLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGV 525
Query: 492 W 492
W
Sbjct: 526 W 526
|
Length = 566 |
| >gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase | Back alignment and domain information |
|---|
Score = 196 bits (498), Expect = 1e-55
Identities = 150/532 (28%), Positives = 244/532 (45%), Gaps = 65/532 (12%)
Query: 13 LLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIIS 72
++ +AV + R +TW++ Y +P + + +NGQFPGP IDAV D +++
Sbjct: 8 IVTVVAVLTHTASAAVREYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVH 67
Query: 73 VYNYLR-EPFLISWNGLQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPS 130
+ N L E +I W+G++Q+ + W DG G T C I PG+ FTY ++ G++FY
Sbjct: 68 LTNKLTTEGLVIHWHGIRQKGSPWADGAAGVTQCAINPGETFTYKFTV-EKPGTHFYHGH 126
Query: 131 FLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSG--HNLP 188
+ ++AG +G + I + P G+F +L DW+ + L S +
Sbjct: 127 YGMQRSAGLYGSL-IVDVAKGPKERLRYDGEFNLLLSDWWHESIPSQELGLSSKPMRWIG 185
Query: 189 FPDGLLINGRGW----------NG----------------YTFTVEPGRTYRFRISNVGL 222
+LINGRG NG T VEP +TYR R+++
Sbjct: 186 EAQSILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTA 245
Query: 223 TTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAP-QDYYIVVSSR 281
S+N +QGH + +VE +G++ T +DI+ G++YSVL+T DQ P Q+YYI V R
Sbjct: 246 LASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVR 305
Query: 282 ----FTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNP 337
T + LT + S+ S P P T ++++ + ++ P+P
Sbjct: 306 GRKPNTTQALTILNYVTAPASKLPSSPP----PVTPRWDDFERSKNFSKKIFSAMGSPSP 361
Query: 338 QGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGS 397
Y +I L N+ ++G ++AIN+VS V TP + + + F S
Sbjct: 362 PKKYRKRLI-------LLNTQNLIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKS 414
Query: 398 MPTS----------PNWGNAYLQTSVMAANFREFVEIVFQNWE------DTVQSYHIDGY 441
P S P + N + F V+++ QN + +H+ G+
Sbjct: 415 PPRSYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGH 474
Query: 442 SFFVVGMDGGQWTPA-SRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492
F+V+G G++ P YNL++ R+T +YP WTAI DN G+W
Sbjct: 475 DFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVW 526
|
Length = 574 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 5e-47
Identities = 61/146 (41%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 160 GDFTVLAGDWYRSNHYVLRRLLD-----SGHNLPFPDGLLINGRGW-NGYTFTVEPGRTY 213
D+ + DWY + L + L P PD +LING+ + T TV PG+TY
Sbjct: 1 EDYVITLSDWYHKDAKDLEKELLASGKAPTDFPPVPDAVLINGKDGASLATLTVTPGKTY 60
Query: 214 RFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQD 273
R RI NV L S+NF I+GH M +VEV+G + T +LDI GQ YSVLVT +Q P +
Sbjct: 61 RLRIINVALDDSLNFSIEGHKMTVVEVDGVYVNPFTVDSLDIFPGQRYSVLVTANQDPGN 120
Query: 274 YYIVVSSRFT-PRVLTTTAILHYSNS 298
Y+IV S T AIL YS +
Sbjct: 121 YWIVASPNIPAFDNGTAAAILRYSGA 146
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 1e-42
Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 34 KITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRN 93
+TYG + PLG +Q I +NGQFPGP I D ++++V N L EP I W+GL+Q
Sbjct: 1 TVTYGTVTPLGGTRQVIGVNGQFPGPTIRVREGDTVVVNVTNNLDEPTTIHWHGLRQPGT 60
Query: 94 SWQDGV-YGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHK-AAGAFGGIRIWSRP 149
W DGV T CPIPPG++FTY K Q G+Y+Y + + AAG +G I I
Sbjct: 61 PWADGVPGVTQCPIPPGESFTYRFTVKQQAGTYWYHSHTSWLQQAAGLYGAIIIEDPA 118
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 119 |
| >gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 2e-33
Identities = 49/141 (34%), Positives = 60/141 (42%), Gaps = 6/141 (4%)
Query: 378 DTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYH 437
DTP KL +I G SP+ G T V+ + VEIV QN +H
Sbjct: 1 DTPPKLPTLLQITGGND--RANWSPDNGPPLGTTEVITLPNGDRVEIVLQNNTMGPHPFH 58
Query: 438 IDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSE 497
+ G+SF V+G GG WTP + YNL D V R T QV P W AI DN G W
Sbjct: 59 LHGHSFQVLGRGGGPWTPTA--TYNLVDPVRRDTVQVPPGGWVAIRFKADNPGPWLFHCH 116
Query: 498 NWARQYLGQQFYLRVYSPANS 518
+L Q + S
Sbjct: 117 IL--WHLDQGMMGQFVVDPGS 135
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135 |
| >gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 3e-26
Identities = 125/536 (23%), Positives = 213/536 (39%), Gaps = 94/536 (17%)
Query: 39 DIYPLG-VKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFL-ISWNGLQQRRNSWQ 96
D + + +++NG PGP+I I VYN + + + + W+GL QR +
Sbjct: 18 DNIKIACSSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFS 77
Query: 97 DGV-YGTTCPIPPGKNFTYVLQAK-DQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVP 154
DG + PIPPG F Y ++ + GSYFY S + +A AFG + + P
Sbjct: 78 DGTPLASQWPIPPGHFFDYEIKPEPGDAGSYFYH-SHVGFQAVTAFGPLIVEDCEPPPYK 136
Query: 155 FPPPAGDFTVLAGDWY-RSNHYVLRRLLDSGHNLPF-----PDGLLINGRGWN-GYT--- 204
+ + +L D++ ++ + + LL + PF + +L+NG+ N +
Sbjct: 137 YD---DERILLVSDFFSATDEEIEQGLLST----PFTWSGETEAVLLNGKSGNKSFYAQI 189
Query: 205 ----------FTVEPGRTYRFR-ISNVGLTTSINFRIQGH-SMKLVEVEGSHTLQNTYAA 252
VEPG+TYR R I L+ I+ I+ H ++ ++E +GS+T
Sbjct: 190 NPSGSCMLPVIDVEPGKTYRLRFIGATALSL-ISLGIEDHENLTIIEADGSYTKPAKIDH 248
Query: 253 LDIHLGQTYSVLVT---------MDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVS 303
L + GQ YSVL D+ + Y+I +R P+V A+L Y + +
Sbjct: 249 LQLGGGQRYSVLFKAKTEDELCGGDK--RQYFIQFETRDRPKVYRGYAVLRYRSDKASKL 306
Query: 304 GPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITL---ANSAPY 360
+P P + S W P + +++R + + N P
Sbjct: 307 PSVPETPPLPLPNSTYD-----WLEYELEPLSEENNQDFPTLDEVTRRVVIDAHQNVDP- 360
Query: 361 MNGKQRYAINSVSFVPA--DTPLKLADYFKIPGVFTLGSMPTSPNWGNAYL------QTS 412
+NG+ + N +S+ + TP L D ++ +P +PN+ A +T
Sbjct: 361 LNGRVAWLQNGLSWTESVRQTPY-LVDIYE-------NGLPATPNYTAALANYGFDPETR 412
Query: 413 VMAANFREFVEIVFQN----------WEDTVQSYHIDGYSFFVVGMDGGQWTPASR---- 458
A E +EIV+QN + +H G F+ +G G++ +
Sbjct: 413 AFPAKVGEVLEIVWQNTGSYTGPNGGVD--THPFHAHGRHFYDIGGGDGEYNATANEAKL 470
Query: 459 --TRYNLRDTV-----ARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQ 507
LRDT A P W A + + N G+W + +G Q
Sbjct: 471 ENYTPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQ 526
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538 |
| >gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 1e-18
Identities = 65/280 (23%), Positives = 95/280 (33%), Gaps = 35/280 (12%)
Query: 52 INGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCPIPPGK 110
NG PGP I D + + + N L + W+GL DGV T P PG+
Sbjct: 57 YNGALPGPTIRVKKGDTVTLDLTNRLLVDTSVHWHGLPVP--GEMDGVPPLTQIPPGPGE 114
Query: 111 NFTYVLQAKDQIGSYFYFPSFLFHKA-------AGAFGGIRIWSRPRIPVPFPPPAG--- 160
TY D G+Y+Y P H AGA I P G
Sbjct: 115 TPTYTFTQ-DVPGTYWYHP----HTHGQVYDGLAGALI---------IEDENSEPLGVDD 160
Query: 161 DFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNV 220
+ +L DW + L + + P D LL+NG F PG R R+ N
Sbjct: 161 EPVILQDDWLDEDGTDLYQEGPAMGGFPG-DTLLVNGAIL---PFKAVPGGVVRLRLLNA 216
Query: 221 GLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSS 280
G + + + G + ++ V+G + L + G+ Y VLV M+ + +
Sbjct: 217 GNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVDMN--DGGAVTLTAL 274
Query: 281 RFTPRVLTTTAILHYSNSR--RGVSGPIPGGPTTEIAWSL 318
V G PT ++A
Sbjct: 275 GEDMPDTLKGFRAPNPILTPSYPVLNGRVGAPTGDMADHA 314
|
Length = 451 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 73.0 bits (179), Expect = 1e-13
Identities = 70/268 (26%), Positives = 102/268 (38%), Gaps = 52/268 (19%)
Query: 44 GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103
G + I +NG PGP + D + + V N L E I W+G+ DGV G +
Sbjct: 61 GRARPAITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGILLPFQ--MDGVPGVS 118
Query: 104 CP-IPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDF 162
I PG+ FTY + Q G+Y+Y F + AG +G + I P P P +
Sbjct: 119 FAGIAPGETFTYRFPVR-QSGTYWYHSHSGFQEQAGLYGPLII--DPAEPDPVRADR-EH 174
Query: 163 TVLAGDW-YRSNHYVLRRL-LDSGH------------NLPFPDGL---LINGRGW----- 200
VL DW + R+L + +GH DGL L + + W
Sbjct: 175 VVLLSDWTDLDPAALFRKLKVMAGHDNYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRM 234
Query: 201 --------NGYTFT---------------VEPGRTYRFRISNVGLTTSINFRIQGHSMKL 237
NG T+T PG R R N T + RI G + +
Sbjct: 235 TPTDLADVNGSTYTYLMNGTTPAGNWTGLFRPGEKVRLRFINGSAMTYFDVRIPGLKLTV 294
Query: 238 VEVEGSHTLQNTYAALDIHLGQTYSVLV 265
V V+G + + I +T+ V+V
Sbjct: 295 VAVDGQYVHPVSVDEFRIAPAETFDVIV 322
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 543 | |||
| PLN02835 | 539 | oxidoreductase | 100.0 | |
| PLN02991 | 543 | oxidoreductase | 100.0 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 100.0 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 100.0 | |
| PLN02792 | 536 | oxidoreductase | 100.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 100.0 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 100.0 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 100.0 | |
| PLN02604 | 566 | oxidoreductase | 100.0 | |
| PLN02191 | 574 | L-ascorbate oxidase | 100.0 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 100.0 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 100.0 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 100.0 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 100.0 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 100.0 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 100.0 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 100.0 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 100.0 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 99.97 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 99.93 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 99.78 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.7 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 99.65 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 99.43 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 99.39 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 99.32 | |
| PLN02835 | 539 | oxidoreductase | 99.31 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 99.3 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 99.11 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 99.05 | |
| PLN02792 | 536 | oxidoreductase | 99.01 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 99.01 | |
| PLN02604 | 566 | oxidoreductase | 99.0 | |
| PLN02991 | 543 | oxidoreductase | 99.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 98.97 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 98.93 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 98.85 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 98.83 | |
| PLN02191 | 574 | L-ascorbate oxidase | 98.79 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 98.73 | |
| PRK02710 | 119 | plastocyanin; Provisional | 98.72 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 98.54 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 98.53 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 98.34 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 98.13 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 98.07 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 98.0 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.98 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 97.88 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 97.69 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 97.64 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 97.64 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 97.54 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 97.53 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 97.31 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 97.17 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 96.74 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 96.53 | |
| PRK02710 | 119 | plastocyanin; Provisional | 96.1 | |
| PRK10378 | 375 | inactive ferrous ion transporter periplasmic prote | 96.04 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.01 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 95.54 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 95.34 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 95.23 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 94.85 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 94.77 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 94.63 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 94.41 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 94.11 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 92.93 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 89.5 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 88.65 | |
| COG4263 | 637 | NosZ Nitrous oxide reductase [Energy production an | 87.43 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 87.26 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 86.25 | |
| COG1622 | 247 | CyoA Heme/copper-type cytochrome/quinol oxidases, | 86.07 | |
| COG1622 | 247 | CyoA Heme/copper-type cytochrome/quinol oxidases, | 80.93 |
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-111 Score=896.27 Aligned_cols=529 Identities=62% Similarity=1.131 Sum_probs=428.3
Q ss_pred hHHHHHHHHHHHHHhhccccCCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceee
Q 009127 5 RVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLIS 84 (543)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH 84 (543)
-|++++++.+.+++ ...+.+++++|+|+|++..+++||+++.+|+||||+|||+||+++||+|+|+|+|+|+++|+||
T Consensus 8 ~~~~~~~~~~~~~~--~~~~~~~~~~y~~~v~~~~~~~dg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~L~~~ttiH 85 (539)
T PLN02835 8 HLLLGVLAVLSSVS--LVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLT 85 (539)
T ss_pred HHHHHHHHHHHHHh--hhhccCcEEEEEEEEEEEEeccCCeEEEEEEECCcCCCCCEEEECCCEEEEEEEeCCCCCCcEE
Confidence 34555555543333 3344568899999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEE
Q 009127 85 WNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTV 164 (543)
Q Consensus 85 ~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l 164 (543)
|||++|++++++||++++||||+||++|+|+|++++++||||||||++.|+.+||+|+|||++++..+.++..+|+|+++
T Consensus 86 WHGl~~~~~~~~DGv~~tQ~pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~e~~l 165 (539)
T PLN02835 86 WNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTL 165 (539)
T ss_pred eCCcccCCCCCCCCCccCcCCCCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCCCCCCceEEE
Confidence 99999999999999999999999999999999986689999999999999999999999998765555566678999999
Q ss_pred EeeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcc
Q 009127 165 LAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSH 244 (543)
Q Consensus 165 ~~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~ 244 (543)
+++||++.....+...+..+...+.++.+||||+. .+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+
T Consensus 166 ~l~Dw~~~~~~~~~~~~~~g~~~~~~d~~liNG~~--~~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~ 243 (539)
T PLN02835 166 LVGDWYKTSHKTLQQRLDSGKVLPFPDGVLINGQT--QSTFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSH 243 (539)
T ss_pred EeeccccCCHHHHHHHhhcCCCCCCCceEEEcccc--CceEEECCCCEEEEEEEEcCCCccEEEEECCCEEEEEEECCcc
Confidence 99999999877666556566666788999999999 8999999999999999999999999999999999999999999
Q ss_pred ccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCCCcccccccccccc
Q 009127 245 TLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSI 324 (543)
Q Consensus 245 ~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 324 (543)
++|..++++.|++||||||+|++++.+|+|||++...+........|+|+|.++..+.+.++|..|..+.......+...
T Consensus 244 v~p~~~~~l~i~~GqRydvlv~~~~~~g~y~i~a~~~~~~~~~~~~ail~Y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 323 (539)
T PLN02835 244 TIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQARTY 323 (539)
T ss_pred CCCceeeEEEECcCceEEEEEEcCCCCCcEEEEEEccccCCCcceEEEEEECCCCCCCCCCCCCCCccccccccchhhcc
Confidence 99999999999999999999999988899999986544333467899999988653332233332211111122222222
Q ss_pred ccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCC
Q 009127 325 RWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNW 404 (543)
Q Consensus 325 ~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~ 404 (543)
...+.+....+.+...........++++.+.......+|...|.|||++|..|+.|++++.+.+.++.|+.++....+..
T Consensus 324 ~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~iN~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~ 403 (539)
T PLN02835 324 RWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSG 403 (539)
T ss_pred ccccCccccCCCCCccccccccCCCceEEEeccccccCCeEEEEECCcccCCCCCChhhhhhhcCCCccccCccccCCCC
Confidence 22233222223322211111223345554432222234667899999999999999987766656666664433333333
Q ss_pred CCCccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEE
Q 009127 405 GNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYM 484 (543)
Q Consensus 405 ~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf 484 (543)
...+.+++++.++.|++|||+|+|.+...||||||||+||||++|.|.|++.....+|+.+|++|||+.|+++||++|||
T Consensus 404 ~~~~~~t~~~~~~~~~~Veivi~N~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP~~RDTv~vp~~gw~~IrF 483 (539)
T PLN02835 404 GPAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILV 483 (539)
T ss_pred CccccCCeEEEcCCCCEEEEEEECCCCCCCCCCCCCccEEEEeccCCCCCcccccccCCCCCCccceEEeCCCCEEEEEE
Confidence 33455688899999999999999998889999999999999999999897655556788999999999999999999999
Q ss_pred EecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCcchhccccCC
Q 009127 485 ALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARG 537 (543)
Q Consensus 485 ~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~ 537 (543)
++||||.|+|||||++|+..||+++|+|.++.+....+.++|++++.||..++
T Consensus 484 ~aDNPG~Wl~HCHi~~H~~~Gm~~~~~V~~~~~~~~~~~~~P~~~~~Cg~~~~ 536 (539)
T PLN02835 484 SLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIG 536 (539)
T ss_pred ECcCCEEeeeeecchhhhhcccEEEEEEccCCCccccccCCCccccccccCcc
Confidence 99999999999999999999999999999987777778899999999998777
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-110 Score=882.67 Aligned_cols=515 Identities=69% Similarity=1.214 Sum_probs=425.9
Q ss_pred cccCCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC
Q 009127 22 VYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG 101 (543)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~ 101 (543)
..+.+++++|+|+|++..+++||+++.+++||||+|||+|++++||+|+|+|+|+|+++++|||||++|.+++++||+++
T Consensus 22 ~~~~~~~~~~~~~vt~~~~~pdG~~r~~~~vNG~~PGP~I~~~~GD~v~V~V~N~L~~~ttiHWHGi~q~~~~~~DGv~~ 101 (543)
T PLN02991 22 VAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNHLDEPFLISWSGIRNWRNSYQDGVYG 101 (543)
T ss_pred hhccCceEEEEEEEEEEEeCCCCEEEEEEEEcCCCCCCcEEEECCCEEEEEecCCCCCCccEEECCcccCCCccccCCCC
Confidence 34456889999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHh
Q 009127 102 TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLL 181 (543)
Q Consensus 102 tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 181 (543)
+||||+||++|+|+|++++|+||||||||.+.|+.+||+|+|||++++..+.|+..+++|++++|+||+++....+...+
T Consensus 102 tQcpI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~d~~i~l~DW~~~~~~~~~~~~ 181 (543)
T PLN02991 102 TTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQL 181 (543)
T ss_pred CCCccCCCCcEEEEEEeCCCCcceEEecCcchhhhCCCeeeEEEeCCcccCcccccccceeEEEecceecCCHHHHHHHh
Confidence 99999999999999999768999999999999999999999999998766666666789999999999999876665555
Q ss_pred ccCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeE
Q 009127 182 DSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTY 261 (543)
Q Consensus 182 ~~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~ 261 (543)
..+...+.+|.+|||||.. .+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|..++++.|++||||
T Consensus 182 ~~~~~~~~~d~~liNG~~~-~~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~~~~p~~~~~l~i~~GQRy 260 (543)
T PLN02991 182 DNGGKLPLPDGILINGRGS-GATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSY 260 (543)
T ss_pred hcCCCCCCCCEEEEccCCC-CceEEECCCCEEEEEEEeccCCeeEEEEECCCEEEEEEeCCccccceeeeEEEEcCCcEE
Confidence 5555567889999999973 578999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCC
Q 009127 262 SVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSY 341 (543)
Q Consensus 262 dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 341 (543)
||+|++++++|+|||++...+........|||+|+++..+...+.|..|. ...+..++.......+.+....+.|...+
T Consensus 261 dvlv~a~~~~~~y~i~~~~~~~~~~~~~~AIl~Y~g~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~l~p~~~~~~p~~~~ 339 (543)
T PLN02991 261 SVLITADQPAKDYYIVVSSRFTSKILITTGVLHYSNSAGPVSGPIPDGPI-QLSWSFDQARAIKTNLTASGPRPNPQGSY 339 (543)
T ss_pred EEEEECCCCCCcEEEEEeeccCCCCcceEEEEEeCCCCCCCCCCCCCCCc-cccccccchhhhhhcccCCCCCCCCCccc
Confidence 99999999899999999865444446789999999875322223333221 11122222112223333322233333222
Q ss_pred CcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcE
Q 009127 342 HYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREF 421 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~ 421 (543)
......+++.+.+.......++...|.|||.+|..|+.|+|++.+..++++|+.+.+.+.|.........+++.++.|++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~s~~~p~~p~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 419 (543)
T PLN02991 340 HYGKINITRTIRLANSAGNIEGKQRYAVNSASFYPADTPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAF 419 (543)
T ss_pred cccccccceeEEEeecccccCceEEEEECCCccCCCCCChhhhhhhcccCccccccccccCCCCccccCCcEEEcCCCCE
Confidence 22223344444443211112456789999999999999999887777778877654444444333445577888999999
Q ss_pred EEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhh
Q 009127 422 VEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWAR 501 (543)
Q Consensus 422 v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~H 501 (543)
|||+|+|.+...||||||||+||||++|.|.|++.+...||+.||++|||+.||++||++|||++||||.|+|||||..|
T Consensus 420 VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G~f~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~W~~HCHi~~h 499 (543)
T PLN02991 420 VEIVFENWEDIVQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWER 499 (543)
T ss_pred EEEEEeCCCCCCCCeeeCCcceEEEEeCCCCCCcccccccCCCCCCcccEEEECCCCEEEEEEECCCCEEeeeeeCcccc
Confidence 99999999888999999999999999999999876666799999999999999999999999999999999999999999
Q ss_pred hhcccEEEEEEecCCCCCCCcCCCCCcchhccccCCC
Q 009127 502 QYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGR 538 (543)
Q Consensus 502 ed~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~~ 538 (543)
+..||.+.+.|.++++..+.+.++|++.++||..++.
T Consensus 500 ~~~gm~~~~~v~~~~~~~~~~~~~P~~~~~Cg~~~~~ 536 (543)
T PLN02991 500 QYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATGH 536 (543)
T ss_pred ccccEEEEEEecCCCCccccccCCCcccCccccCCCC
Confidence 9999999999999888777788999999999987764
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-109 Score=882.26 Aligned_cols=538 Identities=57% Similarity=1.037 Sum_probs=430.6
Q ss_pred CCchhHHHHHHHHHHHHHhhccccCCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCC
Q 009127 1 MRDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREP 80 (543)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~ 80 (543)
|-..|+++++++++++.++.+. +.+++++|+|+|++...++||+.+.+++||||+|||+|++++||+|+|+|+|+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~y~~~v~~~~~~pdG~~r~~~~iNGq~PGP~I~~~~GD~v~V~v~N~l~~~ 79 (552)
T PLN02354 1 MMGGRLLAVLLCLAAAVALVVR-AEDPYFFFTWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNNLDEP 79 (552)
T ss_pred CchHHHHHHHHHHHHHHHHhhh-ccccEEEEEEEEEEEEecCCCeEEEEEEECCCCcCCcEEEeCCCEEEEEEEECCCCC
Confidence 4556888777777755554333 345789999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCC
Q 009127 81 FLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAG 160 (543)
Q Consensus 81 ~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~ 160 (543)
++|||||++|++++++||+++|||||+||++|+|+|++.+++||||||||.+.|+.+||+|+|||+++...+.+|+.+++
T Consensus 80 ttiHWHGi~q~~~~~~DGv~~TQcpI~PG~sf~Y~F~~~~q~GT~WYHsH~~~Q~~~Gl~G~lII~~~~~~~~p~~~~d~ 159 (552)
T PLN02354 80 FLLTWSGIQQRKNSWQDGVPGTNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPED 159 (552)
T ss_pred cccccccccCCCCcccCCCcCCcCCCCCCCcEEEEEEeCCCCcceEEecCccceecCCccceEEEcCCcCCCCCCCCcCc
Confidence 99999999999999999999999999999999999998668999999999999999999999999998766667766789
Q ss_pred ceEEEeeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCC-----CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCee
Q 009127 161 DFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW-----NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSM 235 (543)
Q Consensus 161 e~~l~~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~-----~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~ 235 (543)
|++++++||+++....+...+..+...+.++.+||||+.. ..+.++|++||+|||||||+|....+.|+|+||+|
T Consensus 160 e~~l~l~Dw~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~v~~Gk~yRlRiINa~~~~~~~f~IdgH~~ 239 (552)
T PLN02354 160 DYTVLIGDWYTKSHTALKKFLDSGRTLGRPDGVLINGKSGKGDGKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKM 239 (552)
T ss_pred eEEEEeeeeccCCHHHHHHHHhcCCCCCCCCeEEEeCCcCCCCCCCceEEEECCCCEEEEEEEecCCCceEEEEECCceE
Confidence 9999999999998777666666565456689999999962 24789999999999999999999999999999999
Q ss_pred EEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCCCccc
Q 009127 236 KLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIA 315 (543)
Q Consensus 236 ~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~ 315 (543)
+|||+||.+++|..++++.|++||||||+|++++.+|+|||++...+........|+|+|.++..+.+...|..+. ...
T Consensus 240 tVIa~DG~~v~p~~~~~l~i~~GqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~ail~Y~g~~~~~~~~~p~~~~-~~~ 318 (552)
T PLN02354 240 KLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQAPKDYYMVASTRFLKKVLTTTGIIRYEGGKGPASPELPEAPV-GWA 318 (552)
T ss_pred EEEEeCCcccCCcceeEEEEccCceEEEEEECCCCCCcEEEEEeccccCCCccEEEEEEECCCCCCCCCCCCCCCc-ccc
Confidence 9999999999999999999999999999999998899999999864444446789999998875432222222221 111
Q ss_pred cccccccccccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCC-Ccccc
Q 009127 316 WSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKI-PGVFT 394 (543)
Q Consensus 316 ~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~-~~~~~ 394 (543)
+..........++.+....+.+..........+++++.+.......++...|.|||++|..|+.|+|.+.+.++ .+.++
T Consensus 319 ~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNn~s~~~p~~P~L~~~~~~~~~g~~~ 398 (552)
T PLN02354 319 WSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNSASKVDGKLRYALNGVSHVDPETPLKLAEYFGVADKVFK 398 (552)
T ss_pred cchhhhhhhhhcccccccCCCCCCccccccccccceEEEecccccCCceEEEEECCccCCCCCCChHHhhhhcccCCccc
Confidence 11222222222233222222222211111233455555543221234567899999999999999987765433 24444
Q ss_pred cCCCCCC-CC-CCCCccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeE
Q 009127 395 LGSMPTS-PN-WGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTT 472 (543)
Q Consensus 395 ~~~~~~~-p~-~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv 472 (543)
.+..+.. |. ......+.+++.++.|++|||+|+|.+...||||||||+||||++|.|.|++.....+|+.||++|||+
T Consensus 399 ~~~~~~~pp~~~~~~~~~~~v~~~~~~~~VeiVi~n~~~~~HP~HLHGh~F~Vlg~G~G~~~~~~~~~~nl~nP~rRDTv 478 (552)
T PLN02354 399 YDTIKDNPPAKITKIKIQPNVLNITFRTFVEIIFENHEKSMQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTV 478 (552)
T ss_pred cCccccCCccccCccccCCeeEEcCCCCEEEEEEeCCCCCCCCCcCCCccEEEEeecCCCCCccccccCCcCCCCccceE
Confidence 3311121 11 112334568889999999999999998889999999999999999999998766667899999999999
Q ss_pred EeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCcchhccccCCCCC
Q 009127 473 QVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRHT 540 (543)
Q Consensus 473 ~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~~~~ 540 (543)
.||++||++|||++||||.|+|||||..|+..||.+.+.|.++.+..+...++|++.+.|+..++...
T Consensus 479 ~vp~~Gw~vIRF~aDNPGvW~~HCHi~~H~~~g~~l~~~v~~~~~~~~~~~~~P~~~~~C~~~~~~~~ 546 (552)
T PLN02354 479 QVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMPENALLCGKVKGLPK 546 (552)
T ss_pred EeCCCCeEEEEEEecCCeEEeeeccccccccccceEEEEEeCCccccCcCCCCCccccccccccCCCC
Confidence 99999999999999999999999999999999999999998877666666678999999998887653
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-108 Score=875.09 Aligned_cols=532 Identities=51% Similarity=0.907 Sum_probs=425.7
Q ss_pred HHHHHHHHHhhccccCCCeEEEEEEEEEEEecCCC--eeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCc
Q 009127 10 LIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLG--VKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNG 87 (543)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g--~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG 87 (543)
+++.+++++.+.+.|.+++++|+|+|++..+++|| ..+.+++||||+|||+|++++||+|+|+|+|+|+++++|||||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~pdg~~~~~~vi~vNGq~PGPtI~~~~GD~v~V~V~N~L~~~ttIHWHG 88 (596)
T PLN00044 9 LLAAALALAPAPAGAGDPYAYYDWEVSYVSAAPLGGVKKQEAIGINGQFPGPALNVTTNWNLVVNVRNALDEPLLLTWHG 88 (596)
T ss_pred HHHHHHhcCCCccccCCceEEEEEEEEEEEEccCCCceeeEEEEEcCcCCCCcEEEECCCEEEEEEEeCCCCCccEEECC
Confidence 34444445555566778899999999999999999 5568999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCC-CceEEEe
Q 009127 88 LQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPA-GDFTVLA 166 (543)
Q Consensus 88 ~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~-~e~~l~~ 166 (543)
++|+.++|+||+++|||||+||++|+|+|++++|+||||||||++.|+.+||+|+|||++++..+.||..++ +|.+++|
T Consensus 89 l~q~~t~w~DGv~~TQcPI~PG~sftY~F~~~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~~~~~P~~~~~~~e~~i~l 168 (596)
T PLN00044 89 VQQRKSAWQDGVGGTNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFI 168 (596)
T ss_pred ccCCCCccccCCCCCcCCcCCCCcEEEEEEeCCCCceeEeeccchhhhhCcCeeEEEEcCcccccccccCCcccceEEEe
Confidence 999999999999889999999999999999977899999999999999999999999999876666665434 7999999
Q ss_pred eeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCC------------CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCe
Q 009127 167 GDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW------------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHS 234 (543)
Q Consensus 167 ~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~------------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~ 234 (543)
+||++.+..++...+..|.....++.++|||++. ..+.++|++|++|||||||++..+.+.|+|+||+
T Consensus 169 ~DW~~~~~~~~~~~l~~g~~~~~~d~~lING~g~~~~n~~~~~~~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~ 248 (596)
T PLN00044 169 ADWYARDHRALRRALDAGDLLGAPDGVLINAFGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHN 248 (596)
T ss_pred cccccCCHHHHHHHHhcCCCCCCCCceEEcccCccccCCccccCCCccceEEECCCCEEEEEEEEccCCceEEEEECCCE
Confidence 9999998776665666565556789999999863 1247999999999999999999999999999999
Q ss_pred eEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCc-ceEEEEeeccC----CCccceEEEEEecCCCCCCCCCCCCC
Q 009127 235 MKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQ-DYYIVVSSRFT----PRVLTTTAILHYSNSRRGVSGPIPGG 309 (543)
Q Consensus 235 ~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g-~y~i~~~~~~~----~~~~~~~~il~y~~~~~~~~~~~p~~ 309 (543)
|+||++||.+++|+.+++|.|++||||||+|++++.++ +|||++...+. .+...+.|||+|.++......+.|..
T Consensus 249 mtVIa~DG~~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~a~~~~~~~~~~~~~~~~AIl~Y~~~~~~~~~~~P~~ 328 (596)
T PLN00044 249 LLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASGPLPDA 328 (596)
T ss_pred EEEEEeCCcccCceeeeeEEEcCCceEEEEEECCCCCCCceEEEEecccccCccccCcceeEEEEECCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999998765 89999864321 24467889999988653222223332
Q ss_pred C--CCccccccccccccccccCCCCCCCCCCCCCCcccccceEEEEEecc-CCCcCCeEEEEEcCeeecCCCCchhhhcc
Q 009127 310 P--TTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANS-APYMNGKQRYAINSVSFVPADTPLKLADY 386 (543)
Q Consensus 310 p--~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~iNg~~f~~~~~p~~~~~~ 386 (543)
| ..+..++.+....+..+.......+.|.+........+.+.+.+... .....|+..|+|||++|..|+.|++++.+
T Consensus 329 p~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~Nnvsf~~p~~p~L~a~~ 408 (596)
T PLN00044 329 PDDQYDTAFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELIDGKLRATLNEISYIAPSTPLMLAQI 408 (596)
T ss_pred CcccCCchhhhhhhHhhhhccCCCcCCCCCcccceeeEEeeeeeeeeccccccccCCeEEEEECcccCCCCCCcchhhhh
Confidence 2 12222222222233322222222233332221111222222222110 01112567899999999999999998877
Q ss_pred cCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCC
Q 009127 387 FKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDT 466 (543)
Q Consensus 387 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p 466 (543)
.++.++|+.+ +++.|........+.++.+++|++|||+|+|.....||||||||+|+||++|.|.|++.+...||+.||
T Consensus 409 ~~~~gv~~~~-fp~~pp~~~~~~~t~v~~~~~n~~VeiV~qn~~~~~HP~HLHGh~F~Vvg~G~G~~~~~~~~~~Nl~nP 487 (596)
T PLN00044 409 FNVPGVFKLD-FPNHPMNRLPKLDTSIINGTYKGFMEIIFQNNATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDG 487 (596)
T ss_pred ccCCCcccCC-CCCCCCccccccCceEEEcCCCCEEEEEEeCCCCCCCCeeEcCccEEEEeecCCCCCCCcccccccCCC
Confidence 7777877654 344333333334678899999999999999987779999999999999999999999877778999999
Q ss_pred CcceeEEeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCC-CCCcCCCCCcchhccccCCCCCCC
Q 009127 467 VARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANS-WRDELPIPKNALLCGRARGRHTRP 542 (543)
Q Consensus 467 ~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~-~~~~~~~p~~~~~c~~~~~~~~~~ 542 (543)
++|||+.||++||++|||++||||.|++||||+.|++.||++.|.|.++.+. .+.+.++|++.+.||..+++..++
T Consensus 488 p~RdTv~vp~~gW~aIRF~aDNPG~W~lHCH~~~h~~~Gm~~~~~v~~~~~~~~~~~~~pP~~~~~Cg~~~~~~~~~ 564 (596)
T PLN00044 488 VARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPIPDNAIFCGALSSLQKEQ 564 (596)
T ss_pred CccceEEeCCCCeEEEEEecCCCEEehhhccCchhhcccCcEEEEEecCCCCccccccCCCcccCcccccccCCCCC
Confidence 9999999999999999999999999999999999999999999999987754 556788999999999988877654
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-107 Score=867.91 Aligned_cols=515 Identities=64% Similarity=1.120 Sum_probs=423.1
Q ss_pred ccCCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCC
Q 009127 23 YGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGT 102 (543)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~t 102 (543)
...+++.+|+|+|++...++||+.+++++||||+|||+|++++||+|+|+|+|+|+++++|||||++|++++|+||++++
T Consensus 11 ~~~~~~~~~~~~vt~~~~~pdg~~~~~~~vNGq~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~q~~~~~~DGv~~t 90 (536)
T PLN02792 11 VKADDTLFYNWRVTYGNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLDEPFLLSWNGVHMRKNSYQDGVYGT 90 (536)
T ss_pred hhcCCeEEEEEEEEEEEeCCCCeEEEEEEECCCCCCCcEEEECCCEEEEEEEeCCCCCcCEeCCCcccCCCCccCCCCCC
Confidence 45566789999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHhc
Q 009127 103 TCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLD 182 (543)
Q Consensus 103 q~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~ 182 (543)
||||+||++|+|+|++++|+||||||||.+.|+.+||+|+|||++++..+.+++.+++|++++++||++.....+...+.
T Consensus 91 qcPI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~liI~~~~~~~~p~~~~d~e~~i~l~Dw~~~~~~~~~~~~~ 170 (536)
T PLN02792 91 TCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKKILD 170 (536)
T ss_pred cCccCCCCcEEEEEEeCCCccceEEecCcchhhhcccccceEEeCCcccCcCCCcccceeEEEecccccCCHHHHHHHhh
Confidence 99999999999999997789999999999999999999999998866555666677899999999999988766665555
Q ss_pred cCCCCC-CCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCe
Q 009127 183 SGHNLP-FPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQT 260 (543)
Q Consensus 183 ~g~~~~-~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR 260 (543)
.+...+ .+|.+||||++. ..+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|..+++|.|+||||
T Consensus 171 ~g~~~~~~~d~~liNG~~~~~~~~~~v~~Gk~yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~~v~p~~~~~l~i~~GqR 250 (536)
T PLN02792 171 GGRKLPLMPDGVMINGQGVSYVYSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQT 250 (536)
T ss_pred ccCcCCCCCCEEEEeccCCCCcceEEECCCCEEEEEEEEcCCCceEEEEECCcEEEEEEeCCccCCCcceeEEEEccCce
Confidence 554333 789999999963 246799999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCC-CCccccccccccccccccCCCCCCCCCCC
Q 009127 261 YSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGP-TTEIAWSLNQARSIRWNLTASGPRPNPQG 339 (543)
Q Consensus 261 ~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p-~~~~~~~~~~~~~~~~~l~~~~~~~~p~~ 339 (543)
|||+|++++.+|+|||++...+........|||+|.++..... ..|..| ..+..+........+..+.+..+.+.|.+
T Consensus 251 ydVlV~a~~~~g~Y~i~a~~~~~~~~~~~~ail~Y~g~~~~~~-~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~ 329 (536)
T PLN02792 251 YSVLVTMDQPPQNYSIVVSTRFIAAKVLVSSTLHYSNSKGHKI-IHARQPDPDDLEWSIKQAQSIRTNLTASGPRTNPQG 329 (536)
T ss_pred EEEEEEcCCCCceEEEEEEeccCCCCCceEEEEEECCCCCCCC-CCCCCCCcCCccccccchhhhhhccCCCCCCCCCCc
Confidence 9999999988899999998754434467889999988653211 111111 12222222222222333332223334433
Q ss_pred CCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCC-CCCccceeEEecCC
Q 009127 340 SYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNW-GNAYLQTSVMAANF 418 (543)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~ 418 (543)
........+++++.+.......++...|+|||.+|..|++|+|++.++++.++++.+.+++.|.. +....++.++.++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~p~L~a~~~~~~g~~~~~~~~~~p~~~~~~~~~~~v~~~~~ 409 (536)
T PLN02792 330 SYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDTPLKLADHFKIKGVFKVGSIPDKPRRGGGMRLDTSVMGAHH 409 (536)
T ss_pred ccccceeccceeEEecccccccCceeEEEECCcccCCCCCchhhhhhhccCCCcCcccCccCCcccCCCccCceEEEcCC
Confidence 32222234455554433222233567899999999999999998877666677765444443332 22334678889999
Q ss_pred CcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecc
Q 009127 419 REFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSEN 498 (543)
Q Consensus 419 g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHi 498 (543)
|++|||+|+|.....||||||||+||||++|.|.|++.+...||+.||++||||.|+++||++|||++||||.|+||||+
T Consensus 410 ~~~VeiViqn~~~~~HP~HLHGh~F~Vvg~G~G~~~~~~~~~~Nl~nP~~RdTv~v~~~gw~aIRf~aDNPGvW~~HCh~ 489 (536)
T PLN02792 410 NAFLEIIFQNREKIVQSYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPESWTAVYVALDNVGMWNLRSQF 489 (536)
T ss_pred CCEEEEEEECCCCCCCCeeeCCCceEEEeecCCCCCcccccccCcCCCCccceEEECCCCEEEEEEEeeCCEEEeeeEcc
Confidence 99999999998888999999999999999999999887677899999999999999999999999999999999999999
Q ss_pred hhhhhcccEEEEEEecCCCCCCCcCCCCCcchhccccCCC
Q 009127 499 WARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGR 538 (543)
Q Consensus 499 l~Hed~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~~ 538 (543)
..|+..||++.|.|.++.+..+.+.++|++.++||..+++
T Consensus 490 ~~h~~~Gm~~~~~v~~~~~~~~~~~~pP~~~~~Cg~~~~~ 529 (536)
T PLN02792 490 WARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRASNK 529 (536)
T ss_pred hhccccceEEEEEEccCCCccccccCCCcccCccccccCC
Confidence 9999999999999998887777788999999999987764
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-107 Score=861.36 Aligned_cols=510 Identities=51% Similarity=0.916 Sum_probs=405.3
Q ss_pred CCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCC
Q 009127 25 DSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTC 104 (543)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~ 104 (543)
.+++++|+|+|++...++||+.+++++||||+|||+||+++||+|+|+|+|+|+++|+|||||++|.+++++||+++|||
T Consensus 23 ~a~~~~~~~~vt~~~~~pdG~~~~~~~vNG~~PGP~I~~~~GD~v~V~v~N~L~~~ttiHWHGl~~~~~~~~DGv~gtQc 102 (545)
T PLN02168 23 FAPIVSYQWVVSYSQRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNNLTEPFLMTWNGLQLRKNSWQDGVRGTNC 102 (545)
T ss_pred cccEEEEEEEEEEEEecCCCeEEEEEEECCcCCCCcEEEECCCEEEEEEEeCCCCCccEeeCCccCCCCCCcCCCCCCcC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHhccC
Q 009127 105 PIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSG 184 (543)
Q Consensus 105 ~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~g 184 (543)
||+||++|+|+|++++++||||||||.+.|+.+||+|+|||++++..+.++..+++|++|+++||++.+...+...+..+
T Consensus 103 pI~PG~sftY~F~~~~q~GT~WYHsH~~~Q~~~GL~G~lII~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~g 182 (545)
T PLN02168 103 PILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRASLDNG 182 (545)
T ss_pred CCCCCCcEEEEEEeCCCCceEEEecChhhhhhCcceeEEEEcCCcccCcCcCcccceeeEEEEecCCCCHHHHHhhhhcC
Confidence 99999999999999768999999999999999999999999998766666667789999999999998765554444444
Q ss_pred CCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEE
Q 009127 185 HNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVL 264 (543)
Q Consensus 185 ~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~ 264 (543)
...+.++.+||||++...+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|..+++|.|++||||||+
T Consensus 183 ~~~~~~d~~liNG~~~~~~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~~tVIa~DG~~v~p~~~~~l~i~~GqRydvl 262 (545)
T PLN02168 183 HSLPNPDGILFNGRGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSLDIHVGQSYSVL 262 (545)
T ss_pred CCCCCCCEEEEeccCCCcceEEeCCCCEEEEEEEeccCCceEEEEECCcEEEEEEECCeECCCceeeEEEEcCCceEEEE
Confidence 44567899999999643679999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCC----cceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCC-CccccccccccccccccCCCCCCCCCCC
Q 009127 265 VTMDQAP----QDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPT-TEIAWSLNQARSIRWNLTASGPRPNPQG 339 (543)
Q Consensus 265 v~~~~~~----g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~ 339 (543)
|++++.+ ++|||++............|+|+|.++......++|..|. .+..........+...+.+....+.|..
T Consensus 263 v~a~~~~~g~~~~Y~i~a~~~~~~~~~~~~ail~Y~~~~~~~~~p~p~~p~~~~~~~~~~~~~~~~~~l~p~~~~~~p~~ 342 (545)
T PLN02168 263 VTAKTDPVGIYRSYYIVATARFTDAYLGGVALIRYPNSPLDPVGPLPLAPALHDYFSSVEQALSIRMDLNVGAARSNPQG 342 (545)
T ss_pred EEcCCCCCCCcceEEEEEEecccCCCcceEEEEEECCCCCCCCCCCCCCCcccccccccchhhhhhhcCCCCCCCCCCcc
Confidence 9998654 3899999875444456788999998865322223333221 1111111111111112222222223322
Q ss_pred CCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCC
Q 009127 340 SYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFR 419 (543)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g 419 (543)
.+......+++++.+.......++...|.|||++|..|++|+++..++++++.+..+.++..|.+.....+++++.++.|
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~~ 422 (545)
T PLN02168 343 SYHYGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPGTPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYK 422 (545)
T ss_pred cccccccccceeEEecccccccCceEEEEECCCccCCCCCchhhhhhcccccccccCCCccCCCcCccccCceEEEecCC
Confidence 22122223445554433111124567899999999999999987665544443333322222322112234678899999
Q ss_pred cEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecch
Q 009127 420 EFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENW 499 (543)
Q Consensus 420 ~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil 499 (543)
++|||+|+|.....||||||||+||||++|.|.|++.....+|+.||++|||+.||++||++|||++||||.|+|||||.
T Consensus 423 ~~VeiViqn~~~~~HP~HLHGh~F~Vvg~g~g~~~~~~~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~Wl~HCHi~ 502 (545)
T PLN02168 423 DFYHIVFQNPLFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKA 502 (545)
T ss_pred CEEEEEEeCCCCCCCCeeeCCCceEEEECCCCCCCccccccCCCCCCCccceEEeCCCCEEEEEEEccCCeEEeeeecCc
Confidence 99999999998889999999999999999999998766667999999999999999999999999999999999999999
Q ss_pred hhhhcccEEEEEEe-----cCCCC-CCCcCCCCCcchhccc
Q 009127 500 ARQYLGQQFYLRVY-----SPANS-WRDELPIPKNALLCGR 534 (543)
Q Consensus 500 ~Hed~GMm~~~~V~-----~p~~~-~~~~~~~p~~~~~c~~ 534 (543)
.|++.||++.+.|. +|++. .+.+.++|++.++||.
T Consensus 503 ~~~h~g~gl~~~v~~~~~e~p~~~~~~~~~~~P~~~~~cg~ 543 (545)
T PLN02168 503 EQWYLGQELYMRVKGEGEEDPSTIPVRDENPIPGNVIRCGK 543 (545)
T ss_pred ccceecCcEEEEEEcccccCccccccccccCCChhhccccc
Confidence 99999999999885 34333 3445689999999984
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-100 Score=801.97 Aligned_cols=520 Identities=50% Similarity=0.830 Sum_probs=452.6
Q ss_pred hhccccCCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCC
Q 009127 19 VHGVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDG 98 (543)
Q Consensus 19 ~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG 98 (543)
+++..+.++.+.|+|+++...+.++|.+++++++||++|||+|+|++||+|.|+|.|+++++++|||||++|..++|+||
T Consensus 19 ~~~~~a~~~~~~~~~~v~~~~~s~l~~~~~vi~iNG~fPGP~I~~~~gD~ivV~v~N~~~~~~sihWhGv~q~kn~w~DG 98 (563)
T KOG1263|consen 19 VFFSQAEAPIRFHTWKVTYGTASPLCVEKQVITINGQFPGPTINAEEGDTIVVNVVNRLDEPFSIHWHGVRQRKNPWQDG 98 (563)
T ss_pred HHHhhhcCceEEEEeeEEeeeeccCCccceeEeecCCCCCCeEEEEeCCEEEEEEEeCCCCceEEEeccccccCCccccC
Confidence 34567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeec-cHHHH
Q 009127 99 VYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRS-NHYVL 177 (543)
Q Consensus 99 ~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~-~~~~~ 177 (543)
+.+|||||+||++|+|+|++++|.||||||+|++.|+++|++|+|||.++...+.|++.+++|++|+++||+.+ ....+
T Consensus 99 ~~~TqCPI~Pg~~~tY~F~v~~q~GT~~yh~h~~~~Ra~G~~G~liI~~~~~~p~pf~~pd~E~~ill~dW~~~~~~~~l 178 (563)
T KOG1263|consen 99 VYITQCPIQPGENFTYRFTVKDQIGTLWYHSHVSWQRATGVFGALIINPRPGLPVPFPKPDKEFTILLGDWYKNLNHKNL 178 (563)
T ss_pred CccccCCcCCCCeEEEEEEeCCcceeEEEeeccccccccCceeEEEEcCCccCCCCCCCCCceeEEEeEeeccccCHHHH
Confidence 33499999999999999999889999999999999999999999999999887778888999999999999996 77777
Q ss_pred HHHhccCCCCCC-CCeEEEcCCCCCc----ceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCe
Q 009127 178 RRLLDSGHNLPF-PDGLLINGRGWNG----YTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAA 252 (543)
Q Consensus 178 ~~~~~~g~~~~~-~~~~liNG~~~~~----p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~ 252 (543)
...++.+...+. +|..+|||+.... +.++|++||+|||||+|+|....+.|+|++|+|+||++||.+++|..+++
T Consensus 179 ~~~~~~~~~~p~~~D~~~iNg~~g~~~~~~~~l~v~pGktY~lRiiN~g~~~~l~F~I~~H~ltvVe~Dg~y~~p~~~~~ 258 (563)
T KOG1263|consen 179 KNFLDRTGALPNPSDGVLINGRSGFLYNCTPTLTVEPGKTYRLRIINAGLNTSLNFSIANHQLTVVEVDGAYTKPFTTDS 258 (563)
T ss_pred HHhhccCCCCCCCCCceEECCCCCcccCceeEEEEcCCCEEEEEEEccccccceEEEECCeEEEEEEecceEEeeeeece
Confidence 777766554444 8999999998422 78999999999999999999889999999999999999999999999999
Q ss_pred EEEcCCCeEEEEEEeCCCCcceEEEEeeccCCC----ccceEEEEEecCCCCCCCCCCC----CCCCCcccccccccccc
Q 009127 253 LDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPR----VLTTTAILHYSNSRRGVSGPIP----GGPTTEIAWSLNQARSI 324 (543)
Q Consensus 253 v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~----~~~~~~il~y~~~~~~~~~~~p----~~p~~~~~~~~~~~~~~ 324 (543)
+.|.||||+||++++++.+++|+|.+...+... ...+.++++|.++..+.+...+ ..|..+..++..+.+.+
T Consensus 259 l~i~~GQ~~~vLvtadq~~~~Y~i~~~~~~~~~~~~~~~t~~~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~s~~~~~~~ 338 (563)
T KOG1263|consen 259 LDIHPGQTYSVLLTADQSPGDYYIAASPYFDASNVPFNLTTTGILRYSGSTHPASEKLPIYPFLPPGNDTAWSTYQARSI 338 (563)
T ss_pred EEEcCCcEEEEEEeCCCCCCcEEEEEEeeeccCCcceeeeEEEEEEEeCCcccCcccCcccccCCcccCchhhhhhhhcc
Confidence 999999999999999999999999999876654 6789999999985544333322 22224555667777777
Q ss_pred ccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccC-CCcccccCCCCCCC-
Q 009127 325 RWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFK-IPGVFTLGSMPTSP- 402 (543)
Q Consensus 325 ~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~-~~~~~~~~~~~~~p- 402 (543)
+..+....+.++|.+.+......+.+.+.+.......+++..++||+.+|..|+.|.+++.++. +++.++ +.+++.|
T Consensus 339 r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~siN~isf~~P~tp~~l~~~~~~~~~~~~-~d~p~~P~ 417 (563)
T KOG1263|consen 339 RSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDNKNNGKLRASINNISFVTPKTPSLLAAYFKNIPGYFT-NDFPDKPP 417 (563)
T ss_pred cccccccCcccCCCccccccceeeeccEEeccCCCCCCcEEEEEEcceEEECCCCchhhhhhhccCCcccc-CccCCCCc
Confidence 7777777778888887776666777777776654445778999999999999999998887655 444444 3355555
Q ss_pred -CCC--CCccceeEEecCCCcEEEEEEEeCCC---CCCCeeecCCCeEEEeecCCCCCC--CCCCCCCCCCCCcceeEEe
Q 009127 403 -NWG--NAYLQTSVMAANFREFVEIVFQNWED---TVQSYHIDGYSFFVVGMDGGQWTP--ASRTRYNLRDTVARSTTQV 474 (543)
Q Consensus 403 -~~~--~~~~~~~~~~~~~g~~v~~~i~N~~~---~~HP~HlHG~~F~Vl~~~~g~~~~--~~~~~~~~~~p~~rDTv~v 474 (543)
... +.+.+++++.+++++.+|++|+|.+. ..||||||||.|+||+.|.|.|++ +....||+.+|+.||||.|
T Consensus 418 ~~~~~~~~~~~t~v~~~~~~~~veIVlqN~~~~~~~~hp~HLHG~~F~Vvg~g~G~~~~~~d~~~~yNl~dp~~R~Tv~V 497 (563)
T KOG1263|consen 418 IKFDYTGPTLGTSVMKLEFNSFVEIVLQNTSTGTQENHPNHLHGYNFYVVGYGFGNWDPAKDPRKKYNLVDPVSRDTVQV 497 (563)
T ss_pred cccCCccccccceEEEeecCCEEEEEEeCCccccCCCCccceeceEEEEEEecccccCcCcChhhhcccCCCcccceEEe
Confidence 221 23788999999999999999999874 458999999999999999999998 4446799999999999999
Q ss_pred CCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCcchhccccCCCC
Q 009127 475 YPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRARGRH 539 (543)
Q Consensus 475 p~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~~~ 539 (543)
||+||++|||.|||||+|++|||+.+|...||++.|.|.++++..+.+.++|++.++||..++..
T Consensus 498 ~pggw~aIrf~adNPG~W~~HCHie~H~~~G~~~~f~V~~~~~~~~~~~~~P~~~~~cg~~~~~~ 562 (563)
T KOG1263|consen 498 PPGGWTAIRFVADNPGVWLMHCHIEDHLYLGMETVFIVGNGEESLSSEYPPPKNLPKCGRASGIP 562 (563)
T ss_pred CCCCEEEEEEEcCCCcEEEEEEecHHHHhccCeEEEEEeCCCccCCcCCCCCCCcccccccCCcC
Confidence 99999999999999999999999999999999999999999988888899999999999987754
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-99 Score=811.51 Aligned_cols=497 Identities=29% Similarity=0.505 Sum_probs=384.4
Q ss_pred CeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCCc
Q 009127 27 PYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCP 105 (543)
Q Consensus 27 ~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~~ 105 (543)
++|+|+|+|+++.+++||+++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||++|.+++++||+++ |||+
T Consensus 2 ~~r~y~~~it~~~~~pdG~~~~~~~~NG~~PGP~i~~~~GD~v~v~v~N~l~~~tsiHwHGl~q~~~~~~DGv~~vTq~p 81 (539)
T TIGR03389 2 EVRHYTFDVQEKNVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQYNVTIHWHGVRQLRNGWADGPAYITQCP 81 (539)
T ss_pred ceEEEEEEEEEEEeccCCcEeEEEEECCcccCCEEEEEcCCEEEEEEEeCCCCCeeEecCCCCCCCCCCCCCCcccccCC
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHH-HHHhccC
Q 009127 106 IPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVL-RRLLDSG 184 (543)
Q Consensus 106 i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~-~~~~~~g 184 (543)
|+||++|+|+|++++++||||||||...|+ +||+|+|||+++.+.+.++..+|+|++|+++||++....++ ......+
T Consensus 82 I~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~-~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 160 (539)
T TIGR03389 82 IQPGQSYVYNFTITGQRGTLWWHAHISWLR-ATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG 160 (539)
T ss_pred cCCCCeEEEEEEecCCCeeEEEecCchhhh-ccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHhcC
Confidence 999999999999966899999999998765 59999999999876556666779999999999999876554 3333344
Q ss_pred CCCCCCCeEEEcCCCC--------CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEc
Q 009127 185 HNLPFPDGLLINGRGW--------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIH 256 (543)
Q Consensus 185 ~~~~~~~~~liNG~~~--------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~ 256 (543)
..+..+|+++||||.. ..+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++++.|+
T Consensus 161 ~~~~~~d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~P~~~~~l~i~ 240 (539)
T TIGR03389 161 GAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIG 240 (539)
T ss_pred CCCCccceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCcccCceEeCeEEec
Confidence 4455779999999962 13579999999999999999999899999999999999999999999999999999
Q ss_pred CCCeEEEEEEeCCCCcceEEEEeeccCC----CccceEEEEEecCCCCCCCCCCCCCCC-CccccccccccccccccCCC
Q 009127 257 LGQTYSVLVTMDQAPQDYYIVVSSRFTP----RVLTTTAILHYSNSRRGVSGPIPGGPT-TEIAWSLNQARSIRWNLTAS 331 (543)
Q Consensus 257 pgeR~dv~v~~~~~~g~y~i~~~~~~~~----~~~~~~~il~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~ 331 (543)
+||||||+|++++.+|+|||++...... ......|+|+|.++........+..+. ........... .+...
T Consensus 241 ~GqRydVlv~a~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~l~~~ 316 (539)
T TIGR03389 241 PGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYNDTAAATNFSN----KLRSL 316 (539)
T ss_pred CCCEEEEEEECCCCCceEEEEEeccccCccCCCCcceEEEEEECCCCCCCCCCCCCCCCCCchhhhhHHHh----hcccc
Confidence 9999999999998889999999754221 235689999998865321111111110 01000000000 11111
Q ss_pred CCCCCCCCCCCcccccceEEEEEeccC-----------CCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCC
Q 009127 332 GPRPNPQGSYHYGMIKISRTITLANSA-----------PYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPT 400 (543)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~ 400 (543)
.....|.. .. ...++++.+.... ...+....|.|||++|..|+.|++.+.+.++.+.+..+....
T Consensus 317 ~~~~~~~~-~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~ 392 (539)
T TIGR03389 317 NSAQYPAN-VP---VTIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPAN 392 (539)
T ss_pred cccCCCCC-CC---CCCCeEEEEEeecccccCcccccccCCCcEEEEEECCcccCCCCcchhhhhhcccCCccccCCccC
Confidence 00000100 00 1223332221110 001234679999999998899988655443333322110000
Q ss_pred CCC-----------CCCCccceeEEecCCCcEEEEEEEeCC---CCCCCeeecCCCeEEEeecCCCCCCCC-CCCCCCCC
Q 009127 401 SPN-----------WGNAYLQTSVMAANFREFVEIVFQNWE---DTVQSYHIDGYSFFVVGMDGGQWTPAS-RTRYNLRD 465 (543)
Q Consensus 401 ~p~-----------~~~~~~~~~~~~~~~g~~v~~~i~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~-~~~~~~~~ 465 (543)
.|. +-..+.+.+++.++.|++|||+|+|.+ ...||||||||+||||++|.|.|+... ...+|+.|
T Consensus 393 ~p~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~~~nl~n 472 (539)
T TIGR03389 393 PPTKFNYTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVD 472 (539)
T ss_pred CCccccCCCCCcccccccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCccccccCC
Confidence 110 001223567899999999999999975 348999999999999999999887532 23689999
Q ss_pred CCcceeEEeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCcchhc
Q 009127 466 TVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLC 532 (543)
Q Consensus 466 p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~~~~c 532 (543)
|++|||+.||++||++|||++||||.|+|||||++|+..||++.|.+.+.+.....++++|++++.|
T Consensus 473 P~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~p~~~~~c 539 (539)
T TIGR03389 473 PPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539 (539)
T ss_pred CCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccCCCCccCCCC
Confidence 9999999999999999999999999999999999999999999999876655555678999999999
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-96 Score=793.10 Aligned_cols=500 Identities=32% Similarity=0.539 Sum_probs=386.0
Q ss_pred ccccCCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECC-CCCceeecCcccCCCCCCCCCC
Q 009127 21 GVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYL-REPFLISWNGLQQRRNSWQDGV 99 (543)
Q Consensus 21 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~~~DG~ 99 (543)
...+.+++++|+|+|+++.+++||+.+.+|+|||++|||+|++++||+|+|+|+|++ +++++|||||+++.+++++||+
T Consensus 17 ~~~~~~~~~~y~~~vt~~~~~pdG~~r~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~~~iH~HG~~~~~~~~~DG~ 96 (566)
T PLN02604 17 FPAAEARIRRYKWEVKYEYKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLLTENVAIHWHGIRQIGTPWFDGT 96 (566)
T ss_pred hhhccCcEEEEEEEEEEEEECCCCceeeEEEECCccCCCcEEEECCCEEEEEEEeCCCCCCCCEEeCCCCCCCCccccCC
Confidence 445557899999999999999999999999999999999999999999999999998 5899999999999999999999
Q ss_pred CC-CCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHH
Q 009127 100 YG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLR 178 (543)
Q Consensus 100 p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~ 178 (543)
++ +||+|+||++++|+|++ +++||||||||.+.|+.+||+|+|||+++.+.+.++ .++.|.+|+|+||++....+..
T Consensus 97 ~~~tq~~i~pg~s~~y~f~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~-~~d~d~~l~l~Dw~~~~~~~~~ 174 (566)
T PLN02604 97 EGVTQCPILPGETFTYEFVV-DRPGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPF-SYDYDRSIILTDWYHKSTYEQA 174 (566)
T ss_pred CccccCccCCCCeEEEEEEc-CCCEEEEEeeCcHHHHhCCCeEEEEEEecCCCCCcc-ccCcceEEEeeccccCCHHHHH
Confidence 98 99999999999999999 589999999999999999999999999986555555 4689999999999998765543
Q ss_pred HHhccC--CCCCCCCeEEEcCCCC-----------------------CcceEEEecCCEEEEEEEEcCCcceEEEEEeCC
Q 009127 179 RLLDSG--HNLPFPDGLLINGRGW-----------------------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGH 233 (543)
Q Consensus 179 ~~~~~g--~~~~~~~~~liNG~~~-----------------------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~ 233 (543)
...... .....++.++|||++. ..+.++|++|++|||||||+|+.+.+.|+|+||
T Consensus 175 ~~~~~~~~~~~~~~d~~liNG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRlINa~~~~~~~~sidgH 254 (566)
T PLN02604 175 LGLSSIPFDWVGEPQSLLIQGKGRYNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKTYRLRISSLTALSALSFQIEGH 254 (566)
T ss_pred HhhccCCCccCCCCCceEEcCCCCCCCccccCccccccccccCCCCCCceEEEecCCCEEEEEEEeccccceEEEEECCC
Confidence 222211 1123578999999853 123689999999999999999999999999999
Q ss_pred eeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCc-ceEEEEeeccC-CCccceEEEEEecCCCCCCCCC-C-CCC
Q 009127 234 SMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQ-DYYIVVSSRFT-PRVLTTTAILHYSNSRRGVSGP-I-PGG 309 (543)
Q Consensus 234 ~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g-~y~i~~~~~~~-~~~~~~~~il~y~~~~~~~~~~-~-p~~ 309 (543)
+|+|||+||.+++|+++++|.|++||||||+|++++.+| +|||++..... .+...+.|||+|.+.......+ . +..
T Consensus 255 ~~~VIa~DG~~v~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~~~~~~~~~~~~aIL~Y~~~~~~~~~~~~~~~~ 334 (566)
T PLN02604 255 NMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRNNTTPPGLAIFNYYPNHPRRSPPTVPPSG 334 (566)
T ss_pred EEEEEEeCCEecccceeeeEEEccCCeEEEEEECCCCCCCCEEEEEecccCCCCCcceeEEEEECCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999998765 89999864322 2346789999998653211111 0 101
Q ss_pred CC-CccccccccccccccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccC
Q 009127 310 PT-TEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFK 388 (543)
Q Consensus 310 p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~ 388 (543)
+. ......+++... +......+. ......++++.+.......++...|.||+.+|..|..|++++.+..
T Consensus 335 ~~~~~~~~~~~~~~~----~~~~~~~~~------~~~~~~d~~~~~~~~~~~~~~~~~w~in~~~~~~p~~p~L~~~~~~ 404 (566)
T PLN02604 335 PLWNDVEPRLNQSLA----IKARHGYIH------PPPLTSDRVIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALKEN 404 (566)
T ss_pred Ccccccchhhcchhc----ccccccCcC------CCCCCCCeEEEEeccccccCCeEEEEECcccCCCCCCchhHhhhhc
Confidence 10 000000000000 000000000 0012345555543322223356789999999998888988765544
Q ss_pred CCcccccCCCCC-----------CCCCCCCccceeEEecCCCcEEEEEEEeCC------CCCCCeeecCCCeEEEeecCC
Q 009127 389 IPGVFTLGSMPT-----------SPNWGNAYLQTSVMAANFREFVEIVFQNWE------DTVQSYHIDGYSFFVVGMDGG 451 (543)
Q Consensus 389 ~~~~~~~~~~~~-----------~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~------~~~HP~HlHG~~F~Vl~~~~g 451 (543)
..+.++.+.... .+.....+.+..++.++.|++||++|+|.+ ...||||||||+||||++|.|
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGH~F~Vlg~G~G 484 (566)
T PLN02604 405 LTGAFDQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPWHLHGHDFWVLGYGEG 484 (566)
T ss_pred CCCcccCCCCCcccccccccccCCccccccccCceEEEccCCCeEEEEEECCccccCCCCCCCCEEecCCceEEEEecCC
Confidence 445554221100 000112234567789999999999999985 357999999999999999999
Q ss_pred CCCCCC-CCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCcch
Q 009127 452 QWTPAS-RTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNAL 530 (543)
Q Consensus 452 ~~~~~~-~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~~~ 530 (543)
.|+... ...+|+.+|++|||+.||++||++|||++||||.|+|||||++|...||+++|.+. ++ ...++|++++
T Consensus 485 ~~~~~~~~~~~nl~nP~rRDTv~vp~~gwvvIRF~aDNPG~WlfHCHI~~Hl~~GM~~v~~e~-~~----~~~~~p~~~~ 559 (566)
T PLN02604 485 KFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESHFFMGMGVVFEEG-IE----RVGKLPSSIM 559 (566)
T ss_pred CCCccccccccCCCCCCccceEEeCCCceEEEEEECCCCeEeeEeecchhHhhcCCEEEEeeC-hh----hccCCCCCcC
Confidence 887542 34688999999999999999999999999999999999999999999999999754 33 2457899999
Q ss_pred hccccCC
Q 009127 531 LCGRARG 537 (543)
Q Consensus 531 ~c~~~~~ 537 (543)
+|+..+|
T Consensus 560 ~C~~~~~ 566 (566)
T PLN02604 560 GCGESKG 566 (566)
T ss_pred ccccCCC
Confidence 9997664
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-96 Score=792.27 Aligned_cols=496 Identities=30% Similarity=0.531 Sum_probs=377.3
Q ss_pred CCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-C
Q 009127 25 DSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-T 102 (543)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-t 102 (543)
.+++++|+|+|++..+++||+++++++||||+|||+||+++||+|+|+|+|+|+ ++++|||||+++++++++||+++ +
T Consensus 20 ~~~~~~~~~~vt~~~~~pdG~~~~v~~vNg~~pGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~gvt 99 (574)
T PLN02191 20 SAAVREYTWEVEYKYWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAGVT 99 (574)
T ss_pred ccceEEEEEEEEEEEeccCCceeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEECCCCCCCCCccccCCCccc
Confidence 357899999999999999999999999999999999999999999999999998 78999999999999999999999 9
Q ss_pred CCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHhc
Q 009127 103 TCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLD 182 (543)
Q Consensus 103 q~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~ 182 (543)
||+|+||++|+|+|+++ ++||||||||.+.|+.+||+|+|||+++.+.+.++ .+|+|++|+++||++....+....+.
T Consensus 100 q~pI~PG~s~~Y~f~~~-~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~ 177 (574)
T PLN02191 100 QCAINPGETFTYKFTVE-KPGTHFYHGHYGMQRSAGLYGSLIVDVAKGPKERL-RYDGEFNLLLSDWWHESIPSQELGLS 177 (574)
T ss_pred cCCcCCCCeEEEEEECC-CCeEEEEeeCcHHHHhCCCEEEEEEccCCCCCCCC-CCCeeEEEeeeccccCChHHHHHhhc
Confidence 99999999999999994 89999999999999999999999999754432233 46999999999999986443221121
Q ss_pred c--CCCCCCCCeEEEcCCCCC-------------------------cc-eEEEecCCEEEEEEEEcCCcceEEEEEeCCe
Q 009127 183 S--GHNLPFPDGLLINGRGWN-------------------------GY-TFTVEPGRTYRFRISNVGLTTSINFRIQGHS 234 (543)
Q Consensus 183 ~--g~~~~~~~~~liNG~~~~-------------------------~p-~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~ 234 (543)
. ......++.++|||++.. .| .++|++||+|||||||+|+.+.+.|+|+||+
T Consensus 178 ~~~~~~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~n~~~~p~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~ 257 (574)
T PLN02191 178 SKPMRWIGEAQSILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALASLNLAVQGHK 257 (574)
T ss_pred cCCCCcCCCCCceEECCCCCCCCcccccccCCcccccceeccCCCCCceEEEEcCCCEEEEEEEecCCceeEEEEECCCe
Confidence 1 111245788999987520 12 5999999999999999999999999999999
Q ss_pred eEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCC-cceEEEEeeccCC-CccceEEEEEecCCCCCCC--CCCCCCC
Q 009127 235 MKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAP-QDYYIVVSSRFTP-RVLTTTAILHYSNSRRGVS--GPIPGGP 310 (543)
Q Consensus 235 ~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~-g~y~i~~~~~~~~-~~~~~~~il~y~~~~~~~~--~~~p~~p 310 (543)
|+|||+||.+++|+.+++|.|++||||||+|++++.+ ++||||+...... ......|||+|.+...... .+.+..|
T Consensus 258 ~tVIa~DG~~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~p 337 (574)
T PLN02191 258 LVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKPNTTQALTILNYVTAPASKLPSSPPPVTP 337 (574)
T ss_pred EEEEEcCCeeccceEeeeEEEcCCCeEEEEEECCCCCCCCEEEEEEccccCCCCCCceEEEEECCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999876 5899998654321 1234579999987653211 1111111
Q ss_pred CCccccccccccccccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCC
Q 009127 311 TTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIP 390 (543)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~ 390 (543)
... . ..........+......+.+.. ...++++.+... ....+..+|.|||.+|..|..|+|++.+.+..
T Consensus 338 ~~~-~--~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~-~~~~~~~~~~~n~~s~~~p~~P~L~~~~~~~~ 407 (574)
T PLN02191 338 RWD-D--FERSKNFSKKIFSAMGSPSPPK------KYRKRLILLNTQ-NLIDGYTKWAINNVSLVTPATPYLGSVKYNLK 407 (574)
T ss_pred ccc-c--cchhhcccccccccccCCCCCC------cccceEEEeccc-ceeCCeEEEEECcccCcCCCcchHHHHhhccC
Confidence 100 0 0000011111100000011110 112344433321 11234568999999999899999877654444
Q ss_pred cccccCCCCC---------CCC-CCCCccceeEEecCCCcEEEEEEEeCC------CCCCCeeecCCCeEEEeecCCCCC
Q 009127 391 GVFTLGSMPT---------SPN-WGNAYLQTSVMAANFREFVEIVFQNWE------DTVQSYHIDGYSFFVVGMDGGQWT 454 (543)
Q Consensus 391 ~~~~~~~~~~---------~p~-~~~~~~~~~~~~~~~g~~v~~~i~N~~------~~~HP~HlHG~~F~Vl~~~~g~~~ 454 (543)
+.+..+.... .+. ....+.+.+++.++.|++|||+|+|.+ ...||||||||+||||++|.|.|+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~Vlg~G~g~~~ 487 (574)
T PLN02191 408 LGFNRKSPPRSYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDFWVLGYGDGKFK 487 (574)
T ss_pred cccccCCCcccccccccccCCCccccccccceeEEecCCCEEEEEEECCCcccCCCCCCCCEEeCCCCeEEEEecCCCCC
Confidence 3332211000 000 001234567888999999999999985 568999999999999999999998
Q ss_pred CCC-CCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCcchhcc
Q 009127 455 PAS-RTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCG 533 (543)
Q Consensus 455 ~~~-~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~ 533 (543)
++. ...+|+.||++|||+.||++||++|||++||||.|+|||||++|...||++.|. +.+++ +.++|++.+.|+
T Consensus 488 ~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRf~aDNPG~Wl~HCHi~~Hl~~Gm~~~~~-e~~~~----~~~~p~~~~~C~ 562 (574)
T PLN02191 488 PGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFA-EGLNR----IGKIPDEALGCG 562 (574)
T ss_pred cccCcccccCCCCCcCCeEEeCCCCEEEEEEECCCCEEEEEecCchhhhhcCCEEEEe-cChhh----ccCCCcchhhhh
Confidence 632 246899999999999999999999999999999999999999999999999994 44442 345788999999
Q ss_pred ccCC
Q 009127 534 RARG 537 (543)
Q Consensus 534 ~~~~ 537 (543)
.+.+
T Consensus 563 ~~~~ 566 (574)
T PLN02191 563 LTKQ 566 (574)
T ss_pred cccc
Confidence 7654
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-95 Score=785.11 Aligned_cols=489 Identities=31% Similarity=0.551 Sum_probs=376.9
Q ss_pred eEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-CCCc
Q 009127 28 YRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-TTCP 105 (543)
Q Consensus 28 ~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-tq~~ 105 (543)
+|+|+|+|+++.+++||+.+.+++|||++|||+|++++||+|+|+|+|+|. ++++|||||+++.+++++||+++ +||+
T Consensus 1 ~~~y~~~vt~~~~~pdG~~~~~~~~Ng~~pGP~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~vtq~~ 80 (541)
T TIGR03388 1 IRHYKWEVEYEFWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAGVTQCA 80 (541)
T ss_pred CEEEEEEEEEEEecCCCeEeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCccccCC
Confidence 478999999999999999999999999999999999999999999999985 88999999999999999999998 9999
Q ss_pred CCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHhcc-C
Q 009127 106 IPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDS-G 184 (543)
Q Consensus 106 i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~-g 184 (543)
|+||++++|+|++ +++||||||||.+.|+.+||+|+|||+++...+.++ .+|+|++|+|+||+++...+....... .
T Consensus 81 I~PG~s~~y~f~~-~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 158 (541)
T TIGR03388 81 INPGETFIYNFVV-DRPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPF-HYDGEFNLLLSDWWHKSIHEQEVGLSSKP 158 (541)
T ss_pred cCCCCEEEEEEEc-CCCEEEEEEecchHHhhccceEEEEEecCCCCCCCc-cccceEEEEeecccCCCHHHHHhhcccCC
Confidence 9999999999999 589999999999999999999999999986544555 468999999999999876543222221 1
Q ss_pred -CCCCCCCeEEEcCCCC-------------------------CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEE
Q 009127 185 -HNLPFPDGLLINGRGW-------------------------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLV 238 (543)
Q Consensus 185 -~~~~~~~~~liNG~~~-------------------------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~vi 238 (543)
.....++.++|||++. ....++|++|++|||||||+|+.+.+.|+|+||+|+||
T Consensus 159 ~~~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~VI 238 (541)
T TIGR03388 159 MRWIGEPQSLLINGRGQFNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVV 238 (541)
T ss_pred CcCCCCCcceEECCCCCCCCccccccCccccchhhccCCCCCCceEEEECCCCEEEEEEEcccccceEEEEECCCEEEEE
Confidence 1124578999999852 01348999999999999999999999999999999999
Q ss_pred EEcCccccccccCeEEEcCCCeEEEEEEeCCCC-cceEEEEeeccC-CCccceEEEEEecCCCCCCC--CCCCCCCCCcc
Q 009127 239 EVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAP-QDYYIVVSSRFT-PRVLTTTAILHYSNSRRGVS--GPIPGGPTTEI 314 (543)
Q Consensus 239 a~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~-g~y~i~~~~~~~-~~~~~~~~il~y~~~~~~~~--~~~p~~p~~~~ 314 (543)
|+||.+++|..+++|.|+|||||||+|++++.+ |+|||++..... .....+.|||+|.++..... .+.+..|. ..
T Consensus 239 a~DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~~~~~~~~~~~~aiL~Y~~~~~~~~p~~~~~~~p~-~~ 317 (541)
T TIGR03388 239 EADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNTPPGLTVLNYYPNSPSRLPPTPPPVTPA-WD 317 (541)
T ss_pred EeCCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEecccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCC-cc
Confidence 999999999999999999999999999999766 589999876433 22346789999987643211 11111121 00
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccc
Q 009127 315 AWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFT 394 (543)
Q Consensus 315 ~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~ 394 (543)
+... .......+......+.+. ...++++.+.......++...|.+||.+|..|..|+|.+.+.+..+.+.
T Consensus 318 ~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~p~l~~~~~~~~~~~~ 388 (541)
T TIGR03388 318 DFDR--SKAFSLAIKAAMGSPKPP-------ETSDRRIVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFD 388 (541)
T ss_pred ccch--hhccchhhhccccCCCCC-------CCCCcEEEEeccCcccCceEEEEECcccCCCCCccHHHHHhhcCCcccc
Confidence 0000 000000000000011111 1234554433322223455679999999988889998776544333332
Q ss_pred cCCCC----------CCCCCCCCccceeEEecCCCcEEEEEEEeCC------CCCCCeeecCCCeEEEeecCCCCCCC-C
Q 009127 395 LGSMP----------TSPNWGNAYLQTSVMAANFREFVEIVFQNWE------DTVQSYHIDGYSFFVVGMDGGQWTPA-S 457 (543)
Q Consensus 395 ~~~~~----------~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~------~~~HP~HlHG~~F~Vl~~~~g~~~~~-~ 457 (543)
.+... ..+.....+.+..++.++.|++||++|+|.+ ...||||||||+||||++|.|.|+.. .
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~vlg~g~g~~~~~~~ 468 (541)
T TIGR03388 389 QKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLGYGEGKFRPGVD 468 (541)
T ss_pred CCCCcccccccccccCCCcccccccCceEEEecCCCeEEEEEECCccccCCCCCCCcEEecCCceEEEeeccCCCCcccC
Confidence 11000 0011123345678889999999999999974 45799999999999999998888743 2
Q ss_pred CCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCcchhcc
Q 009127 458 RTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCG 533 (543)
Q Consensus 458 ~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~ 533 (543)
...+|+.+|++|||+.||++||++|||++||||.|+|||||++|+..||++.|.+. ++ ...++|+++++||
T Consensus 469 ~~~~n~~nP~~RDTv~vp~~gwvvIRF~adNPG~W~~HCHi~~H~~~GM~~~~~e~-~~----~~~~~P~~~~~C~ 539 (541)
T TIGR03388 469 EKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEG-VE----KVGKLPKEALGCG 539 (541)
T ss_pred cccccCCCCCEeceEEeCCCceEEEEEECCCCeEeeeeccchhhhhcccEEEEecc-cc----ccCCCCccccCCC
Confidence 34689999999999999999999999999999999999999999999999999654 33 2456899999997
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-93 Score=763.91 Aligned_cols=477 Identities=23% Similarity=0.388 Sum_probs=365.8
Q ss_pred EEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-CCCcC
Q 009127 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-TTCPI 106 (543)
Q Consensus 29 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-tq~~i 106 (543)
..|+|+|++..+++||+.+.+++|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|++++++||+|+ |||+|
T Consensus 9 ~~~~l~v~~~~~~~~g~~r~~~~~NG~~PGP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~vTQcpI 88 (538)
T TIGR03390 9 PDHILRVTSDNIKIACSSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQWPI 88 (538)
T ss_pred ccEEEEEEEeEeccCCeEEEEEEECCcCCCCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcccccCCC
Confidence 46999999999999999999999999999999999999999999999997 89999999999999999999999 99999
Q ss_pred CCCCeEEEEEEeC-CCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHhccCC
Q 009127 107 PPGKNFTYVLQAK-DQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGH 185 (543)
Q Consensus 107 ~PG~~~~y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~g~ 185 (543)
+||++|+|+|+++ +++||||||||.+.|+. ||+|+|||+++... ++ .+|+|++|+|+||+++...++...+..+.
T Consensus 89 ~PG~sf~Y~f~~~~~q~GT~WYHsH~~~Q~~-~l~G~lIV~~~~~~--~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 164 (538)
T TIGR03390 89 PPGHFFDYEIKPEPGDAGSYFYHSHVGFQAV-TAFGPLIVEDCEPP--PY-KYDDERILLVSDFFSATDEEIEQGLLSTP 164 (538)
T ss_pred CCCCcEEEEEEecCCCCeeeEEecCCchhhh-cceeEEEEccCCcc--CC-CccCcEEEEEeCCCCCCHHHHHhhhhccC
Confidence 9999999999984 47999999999999987 59999999987543 33 45899999999999998776543332221
Q ss_pred --CCCCCCeEEEcCCCC--------------CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCe-eEEEEEcCcccccc
Q 009127 186 --NLPFPDGLLINGRGW--------------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHS-MKLVEVEGSHTLQN 248 (543)
Q Consensus 186 --~~~~~~~~liNG~~~--------------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~-~~via~DG~~~~p~ 248 (543)
....++.++||||.. ..+.++|++||+|||||||+|+.+.+.|+|+||+ |+|||+||.+++|+
T Consensus 165 ~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa~DG~~~~P~ 244 (538)
T TIGR03390 165 FTWSGETEAVLLNGKSGNKSFYAQINPSGSCMLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYTKPA 244 (538)
T ss_pred CccCCCCceEEECCccccccccccccCCCCCcceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEEeCCCCCCce
Confidence 124568999999962 1368999999999999999999999999999999 99999999999999
Q ss_pred ccCeEEEcCCCeEEEEEEeCCC-------CcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCCCccccccccc
Q 009127 249 TYAALDIHLGQTYSVLVTMDQA-------PQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQA 321 (543)
Q Consensus 249 ~~~~v~l~pgeR~dv~v~~~~~-------~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 321 (543)
.++++.|++||||||+|++++. +|+||||+......+...+.|||+|.++........|..+...........
T Consensus 245 ~v~~l~l~~GqRydVlv~~~~~~~~~~~~~~~Y~ir~~~~~~~~~~~~~aiL~Y~~~~~~~~~~~p~~~~~~~~~~~~~~ 324 (538)
T TIGR03390 245 KIDHLQLGGGQRYSVLFKAKTEDELCGGDKRQYFIQFETRDRPKVYRGYAVLRYRSDKASKLPSVPETPPLPLPNSTYDW 324 (538)
T ss_pred EeCeEEEccCCEEEEEEECCCccccccCCCCcEEEEEeecCCCCcceEEEEEEeCCCCCCCCCCCCCCCCCCccCcchhh
Confidence 9999999999999999999975 489999997654444456899999986543211111111100000000000
Q ss_pred cccccccCCCCCCCCCCCCCCcccccceEEEEEeccCC--CcCCeEEEEEcCeeecC--CCCchhhhcccCCCcccccCC
Q 009127 322 RSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAP--YMNGKQRYAINSVSFVP--ADTPLKLADYFKIPGVFTLGS 397 (543)
Q Consensus 322 ~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~iNg~~f~~--~~~p~~~~~~~~~~~~~~~~~ 397 (543)
. ...+.+......+. +. ....+++++.+..... ..++...|.|||++|.. ++.|+|...+.+.. .....
T Consensus 325 ~--~~~l~pl~~~~~~~--~~-~~~~~d~~~~l~~~~~~~~~~g~~~~~~N~~s~~~~~~~~P~L~~~~~~~~--~~~~~ 397 (538)
T TIGR03390 325 L--EYELEPLSEENNQD--FP-TLDEVTRRVVIDAHQNVDPLNGRVAWLQNGLSWTESVRQTPYLVDIYENGL--PATPN 397 (538)
T ss_pred h--heeeEecCccccCC--CC-CCCcCceEEEEEccccccccCCeEEEEECCcccCCCCCCCchHHHHhcCCC--CcCCC
Confidence 0 01122111110000 00 0124566666555321 12456789999999985 78899876542210 00000
Q ss_pred CCCCCCCCCCccceeEEecCCCcEEEEEEEeCC--------CCCCCeeecCCCeEEEeecCCCCCCCC-CCCCCCCCCCc
Q 009127 398 MPTSPNWGNAYLQTSVMAANFREFVEIVFQNWE--------DTVQSYHIDGYSFFVVGMDGGQWTPAS-RTRYNLRDTVA 468 (543)
Q Consensus 398 ~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~--------~~~HP~HlHG~~F~Vl~~~~g~~~~~~-~~~~~~~~p~~ 468 (543)
.+..+........++++.++.|++|||+|+|.+ ...||||||||+||||++|.|.|++.. ...+++.||++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~V~ivi~n~~~~~~~~~~~~~HP~HlHGh~F~vlg~G~G~~~~~~~~~~~nl~nP~r 477 (538)
T TIGR03390 398 YTAALANYGFDPETRAFPAKVGEVLEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGDGEYNATANEAKLENYTPVL 477 (538)
T ss_pred cccccccCCcCcCceEEEcCCCCEEEEEEECCcccccCCCCCCCCCeeecCCcEEEEcccccccCCccChhhhccCCCCe
Confidence 000000111223466788999999999999974 468999999999999999999998543 23578889999
Q ss_pred ceeEEeC----------CCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCC
Q 009127 469 RSTTQVY----------PRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 469 rDTv~vp----------~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
|||+.|| +++|++|||++||||.|+|||||.+|...||++.|.|.+.+
T Consensus 478 RDTv~vp~~~~~~~~~~~~~~~~ir~~~dNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~ 535 (538)
T TIGR03390 478 RDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFGDAE 535 (538)
T ss_pred ecceeeccccccccccCCCceEEEEEEcCCCeeEEEeccchhhhhccceEEEEeCChH
Confidence 9999996 78999999999999999999999999999999999997654
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-80 Score=660.19 Aligned_cols=427 Identities=21% Similarity=0.273 Sum_probs=321.2
Q ss_pred EEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCCcCC
Q 009127 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCPIP 107 (543)
Q Consensus 29 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~ 107 (543)
++|+|++++..+.++|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++. +.+||+|+ +||+|+
T Consensus 46 ~~~~L~v~~~~~~~~G~~~~~~~~Ng~~PGP~ir~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DGvP~vt~~~I~ 123 (587)
T TIGR01480 46 TEFDLTIGETMVNFTGRARPAITVNGSIPGPLLRWREGDTVRLRVTNTLPEDTSIHWHGILLP--FQMDGVPGVSFAGIA 123 (587)
T ss_pred ceEEEEEEEEEEecCCeEEEEEEECCccCCceEEEECCCEEEEEEEcCCCCCceEEcCCCcCC--ccccCCCcccccccC
Confidence 799999999999999999999999999999999999999999999999999999999999764 57999998 999999
Q ss_pred CCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHhc-----
Q 009127 108 PGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLD----- 182 (543)
Q Consensus 108 PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~----- 182 (543)
||++|+|+|+++ ++||||||||.+.|+++||+|+|||++++..+ + .+|+|++|+|+||++....++...+.
T Consensus 124 PG~s~~Y~f~~~-~~GTyWYHsH~~~q~~~GL~G~lIV~~~~~~p--~-~~D~E~vl~L~Dw~~~~p~~i~~~l~~~~~~ 199 (587)
T TIGR01480 124 PGETFTYRFPVR-QSGTYWYHSHSGFQEQAGLYGPLIIDPAEPDP--V-RADREHVVLLSDWTDLDPAALFRKLKVMAGH 199 (587)
T ss_pred CCCeEEEEEECC-CCeeEEEecCchhHhhccceEEEEECCCcccc--C-CCCceEEEEeeecccCCHHHHHHhhhccccc
Confidence 999999999995 79999999999999999999999999865433 3 45899999999999765443311110
Q ss_pred -----------------cCCC----------------C------CCCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCC
Q 009127 183 -----------------SGHN----------------L------PFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGL 222 (543)
Q Consensus 183 -----------------~g~~----------------~------~~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~ 222 (543)
.|.. . .....+||||+.. ..+++.+++|++|||||||+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~d~~dv~G~~~~~LiNG~~~~~~~~~~v~~G~rvRLR~INas~ 279 (587)
T TIGR01480 200 DNYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADVNGSTYTYLMNGTTPAGNWTGLFRPGEKVRLRFINGSA 279 (587)
T ss_pred ccccccchhhhhhhhccccccccccccccccccccCCcccccccCccceEEEcCccCCCCceEEECCCCEEEEEEEecCC
Confidence 0100 0 0112489999973 2356899999999999999999
Q ss_pred cceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCCCCC
Q 009127 223 TTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGV 302 (543)
Q Consensus 223 ~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~ 302 (543)
.+.+.|+|+||+|+||++||.+++|+.++++.|+|||||||+|+.+ ..|.|+|.+..... .....++|.+.+.....
T Consensus 280 ~~~f~l~I~gh~m~VIa~DG~~v~Pv~vd~l~I~pGeRyDVlV~~~-~~g~~~i~a~~~~~--~~~~~~~l~~~~~~~~~ 356 (587)
T TIGR01480 280 MTYFDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVEPT-GDDAFTIFAQDSDR--TGYARGTLAVRLGLTAP 356 (587)
T ss_pred CceEEEEECCCEEEEEEcCCcCcCceEeCeEEEcCcceeEEEEecC-CCceEEEEEEecCC--CceEEEEEecCCCCCCC
Confidence 9999999999999999999999999999999999999999999987 46899999876432 23677788876542111
Q ss_pred CCCCCCCCCCcc-ccccccc---ccc-----------c---------------cc-------------------------
Q 009127 303 SGPIPGGPTTEI-AWSLNQA---RSI-----------R---------------WN------------------------- 327 (543)
Q Consensus 303 ~~~~p~~p~~~~-~~~~~~~---~~~-----------~---------------~~------------------------- 327 (543)
..+++..|.... +...... ... . .+
T Consensus 357 ~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (587)
T TIGR01480 357 VPALDPRPLLTMKDMGMGGMHHGMDHSKMSMGGMPGMDMSMRAQSNAPMDHSQMAMDASPKHPASEPLNPLVDMIVDMPM 436 (587)
T ss_pred CCCCCCccccChhhcccccccccccccccccCcccccCccccccccccCccccccccccccCcccccCCccccccccCcc
Confidence 111111110000 0000000 000 0 00
Q ss_pred --cCCCC--CCCCCCCCC----------CcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCccc
Q 009127 328 --LTASG--PRPNPQGSY----------HYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVF 393 (543)
Q Consensus 328 --l~~~~--~~~~p~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~ 393 (543)
+.... ......... .......++++.+... .....+.|+|||+.|.+ .
T Consensus 437 ~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~p~r~~~~~L~--g~m~~~~wtiNG~~~~~-~--------------- 498 (587)
T TIGR01480 437 DRMDDPGIGLRDNGRRVLTYADLHSLFPPPDGRAPGREIELHLT--GNMERFAWSFDGEAFGL-K--------------- 498 (587)
T ss_pred cccCCCCcccccCCcceeehhhccccccccCcCCCCceEEEEEc--CCCceeEEEECCccCCC-C---------------
Confidence 00000 000000000 0000124555554432 12235679999987731 0
Q ss_pred ccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEE
Q 009127 394 TLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQ 473 (543)
Q Consensus 394 ~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~ 473 (543)
..+.++.|++++|.|.|...+.||||||||.|+++..++ .+ +.++||+.
T Consensus 499 ------------------~pl~v~~Gervri~l~N~t~~~HpmHlHG~~f~v~~~~G-~~------------~~~~dTv~ 547 (587)
T TIGR01480 499 ------------------TPLRFNYGERLRVVLVNDTMMAHPIHLHGMWSELEDGQG-EF------------QVRKHTVD 547 (587)
T ss_pred ------------------CceEecCCCEEEEEEECCCCCCcceeEcCceeeeecCCC-cc------------cccCCcee
Confidence 114578999999999999999999999999999987643 11 35789999
Q ss_pred eCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEe
Q 009127 474 VYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 474 vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|+|++++.++|++||||.|+||||++.|++.|||..|+|.
T Consensus 548 V~Pg~t~~~~f~ad~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 548 VPPGGKRSFRVTADALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred eCCCCEEEEEEECCCCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 9999999999999999999999999999999999999883
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-79 Score=649.13 Aligned_cols=411 Identities=19% Similarity=0.220 Sum_probs=302.4
Q ss_pred eEEEEEEEEEEEecCCCee-EEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcC
Q 009127 28 YRFFTWKITYGDIYPLGVK-QQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPI 106 (543)
Q Consensus 28 ~~~~~l~~~~~~~~~~g~~-~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i 106 (543)
...|+|++++....++|.. ..+|+|||++|||+||+++||+|+|+++|+|+++|+|||||+++.+ .+||+| ||+|
T Consensus 45 ~~~~~L~~~~~~~~~~~~~~t~~~~yNg~~PGPtIr~~~Gd~v~v~~~N~L~~~ttiHwHGl~~~~--~~DG~p--q~~I 120 (523)
T PRK10965 45 RGRIQLTIQAGQSSFAGKTATATWGYNGNLLGPAVRLQRGKAVTVDITNQLPEETTLHWHGLEVPG--EVDGGP--QGII 120 (523)
T ss_pred CccEEEEEEEEEEEecCCceeEEEEECCCCCCceEEEECCCEEEEEEEECCCCCccEEcccccCCC--ccCCCC--CCCC
Confidence 3469999999999887644 4799999999999999999999999999999999999999998865 599998 8999
Q ss_pred CCCCeEEEEEEeCCCcccceecCCc----hhhhhccceeEEEEecCCCCCCCCCC--CCCceEEEeeeeeeccHHHHHHH
Q 009127 107 PPGKNFTYVLQAKDQIGSYFYFPSF----LFHKAAGAFGGIRIWSRPRIPVPFPP--PAGDFTVLAGDWYRSNHYVLRRL 180 (543)
Q Consensus 107 ~PG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~~ 180 (543)
.||++++|+|++++++||||||||. +.|+++||+|+|||+++.+.+.+++. ..+|++|+++||+++...++...
T Consensus 121 ~PG~s~~Y~f~~~q~aGT~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~~~~~~lp~~~~~~d~~lvlqD~~~~~~g~~~~~ 200 (523)
T PRK10965 121 APGGKRTVTFTVDQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVDDIPVILQDKRFSADGQIDYQ 200 (523)
T ss_pred CCCCEEEEEeccCCCCceEEEecCCCCCcHHHHhCcCeEEEEEcCccccccCCcccCCCceeeEEEEeeeeCCCCceecc
Confidence 9999999999996568999999995 79999999999999998754333332 34699999999999765543211
Q ss_pred hcc--CCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEE-eCCeeEEEEEcCccc-cccccCeEEEc
Q 009127 181 LDS--GHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRI-QGHSMKLVEVEGSHT-LQNTYAALDIH 256 (543)
Q Consensus 181 ~~~--g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i-~g~~~~via~DG~~~-~p~~~~~v~l~ 256 (543)
.+. ......++.++|||+. .|.+.++ +++|||||||+|+.+.+.|++ ++|+|+|||.||+++ +|..+++|.|+
T Consensus 201 ~~~~~~~~g~~gd~~lVNG~~--~p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~vIa~DG~~l~~P~~v~~l~la 277 (523)
T PRK10965 201 LDVMTAAVGWFGDTLLTNGAI--YPQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLYVIASDGGLLAEPVKVSELPIL 277 (523)
T ss_pred ccccccccCccCCeEEECCcc--cceeecC-CCEEEEEEEeccCCceEEEEEcCCceEEEEEeCCCcccCccEeCeEEEC
Confidence 111 1123467899999999 8999885 579999999999999999998 899999999999986 89999999999
Q ss_pred CCCeEEEEEEeCCCCcceEEEEeeccCCC-----ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCC
Q 009127 257 LGQTYSVLVTMDQAPQDYYIVVSSRFTPR-----VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTAS 331 (543)
Q Consensus 257 pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~ 331 (543)
|||||||+|+++ .+++|.+......... ......++++.........++|... ...
T Consensus 278 pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l------------------~~~ 338 (523)
T PRK10965 278 MGERFEVLVDTS-DGKAFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSL------------------ASL 338 (523)
T ss_pred ccceEEEEEEcC-CCceEEEEEecccCcccccccCCCceeEEEEeccCcCCCCcCChhh------------------ccC
Confidence 999999999998 4678998875432110 0112344444432211111121110 000
Q ss_pred CCCCCCCCCCCcccccceEEEEEeccC-------------------C---------Cc--------------CCe-----
Q 009127 332 GPRPNPQGSYHYGMIKISRTITLANSA-------------------P---------YM--------------NGK----- 364 (543)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------~---------~~--------------~g~----- 364 (543)
.+.+.+.. ...|++.+.... . .. .+.
T Consensus 339 ~~~~~~~~-------~~~r~~~l~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (523)
T PRK10965 339 PALPSLEG-------LTVRRLQLSMDPRLDMMGMQMLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFH 411 (523)
T ss_pred CCCCcccc-------cceeEEEEeeccccchhhhhhcccccccccccccccccccccccccccccccccccccccccccc
Confidence 00000000 000111110000 0 00 000
Q ss_pred EEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEeCCC-CCCCeeecCCCe
Q 009127 365 QRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWED-TVQSYHIDGYSF 443 (543)
Q Consensus 365 ~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F 443 (543)
..|+|||++|.. +. ..+.++.|++++|+|.|.+. +.|||||||++|
T Consensus 412 ~~~~ING~~~~~-~~--------------------------------~~~~~~~G~~e~w~i~N~~~~~~Hp~HlHg~~F 458 (523)
T PRK10965 412 HANKINGKAFDM-NK--------------------------------PMFAAKKGQYERWVISGVGDMMLHPFHIHGTQF 458 (523)
T ss_pred ccccCCCeECCC-CC--------------------------------cceecCCCCEEEEEEEeCCCCCccCeEEeCcEE
Confidence 114788887742 11 11457899999999999875 689999999999
Q ss_pred EEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEec----CcccceeeecchhhhhcccEEEEEEe
Q 009127 444 FVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALD----NVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 444 ~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad----npG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|||++++.... ...+.|||||.|++ +.+.|+++++ ++|.||||||||+|||.|||..|+|.
T Consensus 459 ~Vl~~~g~~~~--------~~~~~wkDTv~v~~-~~~~i~~~f~~~~~~~g~~~~HCHiL~Hed~GMM~~~~V~ 523 (523)
T PRK10965 459 RILSENGKPPA--------AHRAGWKDTVRVEG-GRSEVLVKFDHDAPKEHAYMAHCHLLEHEDTGMMLGFTVS 523 (523)
T ss_pred EEEEecCCCCC--------ccccccccEEEECC-cEEEEEEEecCCCCCCCCEEEEeCchhhhccCccceeEeC
Confidence 99999764221 12368999999988 6777776664 56799999999999999999999984
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-77 Score=626.59 Aligned_cols=399 Identities=19% Similarity=0.200 Sum_probs=295.2
Q ss_pred EEEEEEEEEEecCCC-eeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCC
Q 009127 30 FFTWKITYGDIYPLG-VKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPP 108 (543)
Q Consensus 30 ~~~l~~~~~~~~~~g-~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~P 108 (543)
.++|+++.+....+| ..+.+|+|||++|||+||+++||+|+|+|+|+|+++|++||||+++... .+||++ ++|.|
T Consensus 47 ~~~l~~~~~~~~~~~g~~~~v~~~ng~~pGPtir~~~Gd~v~v~v~N~L~~~ttiHwHGl~~~~~-~~~g~~---~~I~P 122 (471)
T PRK10883 47 PLFLTLQRAHWSFTGGTKASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTEPVSMTVSGLQVPGP-LMGGPA---RMMSP 122 (471)
T ss_pred cEEEEEEEeEEEecCCceeeEEEECCcccCCeEEEECCCEEEEEEEeCCCCCCceeECCccCCCC-CCCCcc---ccCCC
Confidence 378999999988774 6789999999999999999999999999999999999999999998764 577765 88999
Q ss_pred CCeEEEEEEeCCCcccceecCCc----hhhhhccceeEEEEecCCCCCCCCC-C-CCCceEEEeeeeeeccHHHHHHHhc
Q 009127 109 GKNFTYVLQAKDQIGSYFYFPSF----LFHKAAGAFGGIRIWSRPRIPVPFP-P-PAGDFTVLAGDWYRSNHYVLRRLLD 182 (543)
Q Consensus 109 G~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~-~-~~~e~~l~~~d~~~~~~~~~~~~~~ 182 (543)
|++|+|+|++.+++||||||||. ..|+++||+|+|||+++.+.+.+++ . ..+|++|+++||.++...... +..
T Consensus 123 G~~~~y~f~~~~~aGT~WYH~H~~~~t~~qv~~GL~G~lII~d~~~~~~~~p~~~~~~d~~l~l~D~~~~~~g~~~-~~~ 201 (471)
T PRK10883 123 NADWAPVLPIRQNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE-YNE 201 (471)
T ss_pred CCeEEEEEecCCCceeeEEccCCCCchhhhHhcCCeEEEEEeCCcccccCCcccCCCcceeEEeeeeeeccCCCcc-ccc
Confidence 99999999986669999999995 4699999999999999765443433 2 345999999999987543321 001
Q ss_pred cCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEE-eCCeeEEEEEcCccc-cccccCeEEEcCCCe
Q 009127 183 SGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRI-QGHSMKLVEVEGSHT-LQNTYAALDIHLGQT 260 (543)
Q Consensus 183 ~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i-~g~~~~via~DG~~~-~p~~~~~v~l~pgeR 260 (543)
.......++.++|||+. .|.++|++| +|||||||+|+.+.+.|+| ++|+|+||++||+++ +|..++++.|+||||
T Consensus 202 ~~~~g~~gd~~lvNG~~--~p~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~~vIa~DGg~~~~P~~~~~l~l~pGeR 278 (471)
T PRK10883 202 PGSGGFVGDTLLVNGVQ--SPYVEVSRG-WVRLRLLNASNARRYQLQMSDGRPLHVIAGDQGFLPAPVSVKQLSLAPGER 278 (471)
T ss_pred cccCCccCCeeEECCcc--CCeEEecCC-EEEEEEEEccCCceEEEEEcCCCeEEEEEeCCCcccCCcEeCeEEECCCCe
Confidence 11123467899999999 899999975 8999999999999999999 899999999997776 899999999999999
Q ss_pred EEEEEEeCCCCcceEEEEeeccCCC-cc----------ceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccC
Q 009127 261 YSVLVTMDQAPQDYYIVVSSRFTPR-VL----------TTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLT 329 (543)
Q Consensus 261 ~dv~v~~~~~~g~y~i~~~~~~~~~-~~----------~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~ 329 (543)
|||+|++++ .+.+.+++....... .. ....+++...... .+..+ ..++..+.
T Consensus 279 ~dvlVd~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-----------~~~p~~l~ 341 (471)
T PRK10883 279 REILVDMSN-GDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGL-----LPLVT-----------DNLPMRLL 341 (471)
T ss_pred EEEEEECCC-CceEEEECCCccccccccccccCCccccccceeEEEEcccc-----ccCCC-----------CcCChhhc
Confidence 999999984 556666653211000 00 0011111111100 00000 00000111
Q ss_pred CCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCcc
Q 009127 330 ASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYL 409 (543)
Q Consensus 330 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 409 (543)
+.. ..+ ......+++.+.. ..|.|||++|.+...
T Consensus 342 ~~~--~~~------~~~~~~~~~~l~~--------~~~~INg~~~~~~~~------------------------------ 375 (471)
T PRK10883 342 PDE--IME------GSPIRSREISLGD--------DLPGINGALWDMNRI------------------------------ 375 (471)
T ss_pred CCC--CCC------CCCcceEEEEecC--------CcCccCCcccCCCcc------------------------------
Confidence 000 000 0011233444321 136899999853110
Q ss_pred ceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCc
Q 009127 410 QTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNV 489 (543)
Q Consensus 410 ~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnp 489 (543)
.+.++.|++++|+|.|. +.||||||||.|||+++++.... ..+..|||||.|+ +.++|+++++++
T Consensus 376 ---~~~~~~g~~e~W~~~n~--~~HP~HlHg~~FqVl~~~G~~~~--------~~~~gwkDTV~v~--~~v~i~~~f~~~ 440 (471)
T PRK10883 376 ---DVTAQQGTWERWTVRAD--MPQAFHIEGVMFLIRNVNGAMPF--------PEDRGWKDTVWVD--GQVELLVYFGQP 440 (471)
T ss_pred ---eeecCCCCEEEEEEECC--CCcCEeECCccEEEEEecCCCCC--------ccccCcCcEEEcC--CeEEEEEEecCC
Confidence 13468999999999886 68999999999999999763211 1124799999996 469999999988
Q ss_pred c----cceeeecchhhhhcccEEEEEEec
Q 009127 490 G----MWNIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 490 G----~w~~HCHil~Hed~GMm~~~~V~~ 514 (543)
| .||||||||+|||.|||..|+|..
T Consensus 441 ~~~~~~~m~HCHiLeHeD~GMM~~~~V~~ 469 (471)
T PRK10883 441 SWAHFPFLFYSQTLEMADRGSIGQLLVNP 469 (471)
T ss_pred CCCCCcEEeecccccccccCCccCeEEec
Confidence 7 899999999999999999999965
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-61 Score=512.44 Aligned_cols=412 Identities=21% Similarity=0.225 Sum_probs=296.7
Q ss_pred EEEEEEEEEEe-cCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCCcCC
Q 009127 30 FFTWKITYGDI-YPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCPIP 107 (543)
Q Consensus 30 ~~~l~~~~~~~-~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~ 107 (543)
...+....... ..++.....|+|||++|||+||+++||+|+|+++|+|.+.|++||||+.++ +.+||++. +|+++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gP~i~~~~Gd~v~l~~~N~l~~~t~vh~HG~~~p--~~~dG~~~~~~~~~~ 111 (451)
T COG2132 34 RTFLTAQRAQLAFAPGTGATVWGYNGALPGPTIRVKKGDTVTLDLTNRLLVDTSVHWHGLPVP--GEMDGVPPLTQIPPG 111 (451)
T ss_pred ceEEeecccceeeecCCCceeEEecccccCceEEEecCCEEEEEEEeCCCCCceEEEcCcccC--ccccCCCcccccCCC
Confidence 33444444443 456677889999999999999999999999999999988899999998665 68999998 999999
Q ss_pred CCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHhccCCCC
Q 009127 108 PGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNL 187 (543)
Q Consensus 108 PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~g~~~ 187 (543)
||++++|.|+.+ ++||||||+|.+.|+++||+|++||++....+. .+|++..++..+|........... ......
T Consensus 112 ~~~~~~y~f~~~-~~gT~wyh~H~~~Q~~~Gl~G~~II~~~~~~~~---~~d~~~~i~~~~~~~~~~~~~~~~-~~~~~~ 186 (451)
T COG2132 112 PGETPTYTFTQD-VPGTYWYHPHTHGQVYDGLAGALIIEDENSEPL---GVDDEPVILQDDWLDEDGTDLYQE-GPAMGG 186 (451)
T ss_pred CCCcEEEeecCC-CCcceEeccCCCchhhcccceeEEEeCCCCCCC---CCCceEEEEEeeeecCCCCccccC-CccccC
Confidence 999999999995 677999999999999999999999999865443 447777777788876543322211 111123
Q ss_pred CCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEe
Q 009127 188 PFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTM 267 (543)
Q Consensus 188 ~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~ 267 (543)
..++..+|||+. .|.+.++.| +||||++|+++.+.+.+++.+++|+||++||.+++|..+|.+.|+||||+||++++
T Consensus 187 ~~g~~~~vnG~~--~p~~~~~~g-~~rlRl~n~~~~~~~~~~~~~~~~~Vi~~DG~~v~~~~~d~~~l~p~er~~v~v~~ 263 (451)
T COG2132 187 FPGDTLLVNGAI--LPFKAVPGG-VVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVDM 263 (451)
T ss_pred CCCCeEEECCCc--cceeecCCC-eEEEEEEecCCceEEEEEecCceEEEEEeCCcCcCceeeeeEEecCcceEEEEEEc
Confidence 456899999987 677777665 69999999998888999999999999999999999989999999999999999999
Q ss_pred CCCCcceEEEEeeccCCCccceEEEEEecCCCCCC---CCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcc
Q 009127 268 DQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGV---SGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYG 344 (543)
Q Consensus 268 ~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~---~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 344 (543)
++ .+.+.+.+...... ....+........... ..+....+..+. ....... .+... ...+.
T Consensus 264 ~~-~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~--~~~~~--~~~~~------ 327 (451)
T COG2132 264 ND-GGAVTLTALGEDMP--DTLKGFRAPNPILTPSYPVLNGRVGAPTGDM---ADHAPVG--LLVTI--LVEPG------ 327 (451)
T ss_pred CC-CCeEEEEeccccCC--ceeeeeeccccccccccccccccccCCCcch---hhccccc--cchhh--cCCCc------
Confidence 94 77788887652111 1122222111111000 000000010000 0000000 00000 00000
Q ss_pred cccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEE
Q 009127 345 MIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEI 424 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 424 (543)
...+..+.+.. ..+...|.+|++.|.+ + ...+.++.|++++|
T Consensus 328 -~~~~~~~~l~~----~~~~~~~~~n~~~~~~-~--------------------------------~~~~~~~~G~~~~~ 369 (451)
T COG2132 328 -PNRDTDFHLIG----GIGGYVWAINGKAFDD-N--------------------------------RVTLIAKAGTRERW 369 (451)
T ss_pred -ccccccchhhc----ccccccccccCccCCC-C--------------------------------cCceeecCCCEEEE
Confidence 00111111111 1123457777777642 1 11245789999999
Q ss_pred EEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhhhc
Q 009127 425 VFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYL 504 (543)
Q Consensus 425 ~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~ 504 (543)
+|.|.+.+.|||||||+.|+|++.+. ......+.||||+.+.+++.++|+|.+++||.||||||+++|++.
T Consensus 370 ~i~n~~~~~HP~HlHg~~F~v~~~~~---------~~~~~~~~~kDTv~v~~~~~~~v~~~a~~~g~~~~HCH~l~H~~~ 440 (451)
T COG2132 370 VLTNDTPMPHPFHLHGHFFQVLSGDA---------PAPGAAPGWKDTVLVAPGERLLVRFDADYPGPWMFHCHILEHEDN 440 (451)
T ss_pred EEECCCCCccCeEEcCceEEEEecCC---------CcccccCccceEEEeCCCeEEEEEEeCCCCCceEEeccchhHhhc
Confidence 99999999999999999999999971 112234689999999999999999999999999999999999999
Q ss_pred ccEEEEEEec
Q 009127 505 GQQFYLRVYS 514 (543)
Q Consensus 505 GMm~~~~V~~ 514 (543)
|||..+.|..
T Consensus 441 Gm~~~~~v~~ 450 (451)
T COG2132 441 GMMGQFGVVP 450 (451)
T ss_pred CCeeEEEecC
Confidence 9999998853
|
|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-49 Score=393.77 Aligned_cols=264 Identities=17% Similarity=0.183 Sum_probs=219.3
Q ss_pred ccCCCeEEEEEEEEEEEec-CCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC--CCceeecCcccCCCCCCCCCC
Q 009127 23 YGDSPYRFFTWKITYGDIY-PLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR--EPFLISWNGLQQRRNSWQDGV 99 (543)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~--~~~~iH~HG~~~~~~~~~DG~ 99 (543)
.+...+++|+|++++.++. .+|..+.+|+|||++|||+||+++||+|+|+|+|+++ ..+++||||.. .+||+
T Consensus 22 ~~~~~~~~~~l~a~~~~~~~~~G~~~~~~~~nG~~pGP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~-----~~dg~ 96 (311)
T TIGR02376 22 RSGPKVVEVTMTIEEKKMVIDDGVTYQAMTFDGSVPGPLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT-----GALGG 96 (311)
T ss_pred cCCCcEEEEEEEEEEEEEEeCCCeEEEEEEECCcccCceEEEECCCEEEEEEEeCCCCCCceeeeecCCC-----ccCCC
Confidence 3555789999999999987 5799999999999999999999999999999999986 57899999962 47888
Q ss_pred CC-CCCcCCCCCeEEEEEEeCCCcccceecCC----chhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccH
Q 009127 100 YG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPS----FLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNH 174 (543)
Q Consensus 100 p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~ 174 (543)
+. +| |.||++++|+|+++ ++|||||||| +..|+.+||+|+|||++++..+ ..|+|++|+++||+++..
T Consensus 97 ~~~~~--I~PG~t~ty~F~~~-~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~~~~----~~d~e~~l~l~d~~~~~~ 169 (311)
T TIGR02376 97 AALTQ--VNPGETATLRFKAT-RPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREGLP----EYDKEYYIGESDLYTPKD 169 (311)
T ss_pred Cccee--ECCCCeEEEEEEcC-CCEEEEEEcCCCCchhHHhhcCcceEEEeeccCCCc----CcceeEEEeeeeEecccc
Confidence 76 65 99999999999994 8999999999 4679999999999999875422 458999999999998754
Q ss_pred HHHHHHhc-c-C-CCCCCCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccc-
Q 009127 175 YVLRRLLD-S-G-HNLPFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNT- 249 (543)
Q Consensus 175 ~~~~~~~~-~-g-~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~- 249 (543)
........ . + .....++.++|||+.. ..+.+++++|+++||||+|++..+.+.||++|+.|++|+.||.+++|..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~~~v~~DG~~~~~~~~ 249 (311)
T TIGR02376 170 EGEGGAYEDDVAAMRTLTPTHVVFNGAVGALTGDNALTAGVGERVLFVHSQPNRDSRPHLIGGHGDYVWVTGKFANPPNR 249 (311)
T ss_pred ccccccccchHHHHhcCCCCEEEECCccCCCCCCcccccCCcEEEEEEcCCCCCCCCCeEecCCceEEEECCcccCCCCC
Confidence 32110000 0 0 0123568999999952 1467899999999999999999889999999999999999999998644
Q ss_pred -cCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCC
Q 009127 250 -YAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSR 299 (543)
Q Consensus 250 -~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~ 299 (543)
++++.|+||||+||+|+++ .+|.|+++++...........++|+|++..
T Consensus 250 ~~~~~~i~PG~R~dv~v~~~-~pG~y~~~~~~~~~~~~~g~~~~i~~~g~~ 299 (311)
T TIGR02376 250 DVETWFIPGGSAAAALYTFE-QPGVYAYVDHNLIEAFEKGAAAQVKVEGAW 299 (311)
T ss_pred CcceEEECCCceEEEEEEeC-CCeEEEEECcHHHHHHhCCCEEEEEECCCC
Confidence 8999999999999999999 589999999765433234578999998764
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=260.20 Aligned_cols=116 Identities=39% Similarity=0.704 Sum_probs=108.3
Q ss_pred EEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCCcCCCCCeE
Q 009127 34 KITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCPIPPGKNF 112 (543)
Q Consensus 34 ~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~PG~~~ 112 (543)
+|++..+.++|..+++|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++...+++||+++ +||+|.||+++
T Consensus 1 ~v~~~~~~~~~~~~~~~~~ng~~pGPtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~pG~~~ 80 (117)
T PF07732_consen 1 NVTETTVSPDGGTRKVWTYNGQFPGPTIRVREGDTVRITVTNNLDEPTSIHWHGLHQPPSPWMDGVPGVTQCPIAPGESF 80 (117)
T ss_dssp -EEEEEEETTSTEEEEEEETTBSSEEEEEEETTEEEEEEEEEESSSGBSEEEETSBSTTGGGGSGGTTTSGSSBSTTEEE
T ss_pred CeeEEEEEeCCcEEEEEEECCCCCCCEEEEEcCCeeEEEEEeccccccccccceeeeeeeeecCCcccccceeEEeecce
Confidence 47889999999889999999999999999999999999999999999999999999988889999998 99999999999
Q ss_pred EEEEEeCCCcccceecCCchhhhhccceeEEEEecCC
Q 009127 113 TYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRP 149 (543)
Q Consensus 113 ~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 149 (543)
+|+|++++++||||||||...|..+||+|+|||++++
T Consensus 81 ~Y~~~~~~~~Gt~wYH~H~~~~~~~GL~G~~iV~~~~ 117 (117)
T PF07732_consen 81 TYEFTANQQAGTYWYHSHVHGQQVMGLYGAIIVEPPE 117 (117)
T ss_dssp EEEEEESSCSEEEEEEECSTTHHHTTEEEEEEEE-TT
T ss_pred eeeEeeeccccceeEeeCCCchhcCcCEEEEEEcCCC
Confidence 9999997559999999998888889999999999863
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=230.98 Aligned_cols=108 Identities=30% Similarity=0.462 Sum_probs=97.5
Q ss_pred CccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 009127 407 AYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMAL 486 (543)
Q Consensus 407 ~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a 486 (543)
.+.+...+.++.|++++|+|+|.+...|||||||++|+|++++.+.++......+++.+|.||||+.|+++++++|||++
T Consensus 29 ~~~~~~~~~~~~g~~v~~~l~N~~~~~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~ 108 (138)
T PF07731_consen 29 FFGNTPVIEVKNGDVVEIVLQNNGSMPHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRA 108 (138)
T ss_dssp SSSTTSEEEEETTSEEEEEEEECTTSSEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEE
T ss_pred cCCCcceEEEeCCCEEEEEEECCCCCccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEe
Confidence 34567789999999999999999999999999999999999998776555555678889999999999999999999999
Q ss_pred cCcccceeeecchhhhhcccEEEEEEec
Q 009127 487 DNVGMWNIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 487 dnpG~w~~HCHil~Hed~GMm~~~~V~~ 514 (543)
||||.|+||||+++|+|.|||+.|+|.+
T Consensus 109 ~~~G~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 109 DNPGPWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp TSTEEEEEEESSHHHHHTT-EEEEEECH
T ss_pred ecceEEEEEEchHHHHhCCCeEEEEEcC
Confidence 9999999999999999999999999864
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=207.90 Aligned_cols=139 Identities=35% Similarity=0.644 Sum_probs=115.3
Q ss_pred CceEEEeeeeeeccHHHHHH-HhccC----CCCCCCCeEEEcCCCC-----------CcceEEEecCCEEEEEEEEcCCc
Q 009127 160 GDFTVLAGDWYRSNHYVLRR-LLDSG----HNLPFPDGLLINGRGW-----------NGYTFTVEPGRTYRFRISNVGLT 223 (543)
Q Consensus 160 ~e~~l~~~d~~~~~~~~~~~-~~~~g----~~~~~~~~~liNG~~~-----------~~p~~~v~~G~~~rlRiiN~~~~ 223 (543)
+|++|+++||+++....+.. .+..+ ..++.+++++|||++. ..+.+++++|++|||||||+|+.
T Consensus 1 ~e~~i~l~DW~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~v~~g~~~rlRliNa~~~ 80 (159)
T PF00394_consen 1 EEYVIMLSDWYHDDSDDLLQQYFAPGKGPMGMPPIPDSILINGKGRFDCSSADYTGGEPPVIKVKPGERYRLRLINAGAS 80 (159)
T ss_dssp GGGEEEEEEETSSCTTTHBH-HSSCHHHSHSCTSSCSEEEETTBTCBTTCTTGSTTSTSGEEEEETTTEEEEEEEEESSS
T ss_pred CeEEEEEeECCCCCHHHhhhhhccccccccCCCcCCcEEEECCccccccccccccccccceEEEcCCcEEEEEEEeccCC
Confidence 47899999999987665533 33222 2267899999999753 26899999999999999999999
Q ss_pred ceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeec----cCCCccceEEEEEecCC
Q 009127 224 TSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSR----FTPRVLTTTAILHYSNS 298 (543)
Q Consensus 224 ~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~----~~~~~~~~~~il~y~~~ 298 (543)
+.+.|+|+||+|+|||+||.+++|..++++.|+|||||||+|++++++|+|+|++... .........|+|+|.++
T Consensus 81 ~~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y~~~ 159 (159)
T PF00394_consen 81 TSFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQRYDVLVTADQPPGNYWIRASYQHDSINDPQNGNALAILRYDGA 159 (159)
T ss_dssp -BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEEEEEEEEECSCSSEEEEEEEESSSSSHSHGGGTTEEEEEETTS
T ss_pred eeEEEEeeccceeEeeeccccccccccceEEeeCCeEEEEEEEeCCCCCeEEEEEecccCCCccCCCcEEEEEEEECCC
Confidence 9999999999999999999999999999999999999999999997799999999522 12235679999999863
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-18 Score=154.63 Aligned_cols=103 Identities=20% Similarity=0.209 Sum_probs=82.3
Q ss_pred CCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC---CCceeecCcccCCCCCCCCCCCC-CCCcCCCC----Ce--
Q 009127 42 PLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR---EPFLISWNGLQQRRNSWQDGVYG-TTCPIPPG----KN-- 111 (543)
Q Consensus 42 ~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~---~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~PG----~~-- 111 (543)
..+....-+.++| .++|+|++++||+|+|+|+|.+. ....||+||...+..+.+||++. +|++|.|+ +.
T Consensus 36 ~~~~~~~~f~~~~-~~~P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~~~~~~~~i~p~~~~g~~~~ 114 (148)
T TIGR03095 36 MPGPSMYSFEIHD-LKNPTIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGLGFVAGTGFLPPPKSGKFGY 114 (148)
T ss_pred CCCCCceeEEecC-CCCCEEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCCCccccCcccCCCCCCccce
Confidence 3455566678888 46999999999999999999954 45677777776555567999998 99998884 11
Q ss_pred EEEEEEeCCCcccceecCCchhhhhccceeEEEEe
Q 009127 112 FTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 112 ~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (543)
.++.|+++ ++||||||||...|+.+||+|.|||+
T Consensus 115 ~~~tf~f~-~aGtywyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 115 TDFTYHFS-TAGTYWYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred eEEEEECC-CCeEEEEEcCChhHHHCCCEEEEEEC
Confidence 34556654 79999999999999999999999996
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-15 Score=152.26 Aligned_cols=244 Identities=13% Similarity=0.032 Sum_probs=157.9
Q ss_pred CCeEEEcCCCCCcceEEEecCCEEEEEEEEcCC-cceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeC
Q 009127 190 PDGLLINGRGWNGYTFTVEPGRTYRFRISNVGL-TTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMD 268 (543)
Q Consensus 190 ~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~-~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 268 (543)
.+.+++||+.. .|.++++.|+++++++.|... ...|.+|+|++. +.||.. ....|.|||++.+.|+++
T Consensus 47 ~~~~~~nG~~p-GP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~----~~dg~~------~~~~I~PG~t~ty~F~~~ 115 (311)
T TIGR02376 47 YQAMTFDGSVP-GPLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT----GALGGA------ALTQVNPGETATLRFKAT 115 (311)
T ss_pred EEEEEECCccc-CceEEEECCCEEEEEEEeCCCCCCceeeeecCCC----ccCCCC------cceeECCCCeEEEEEEcC
Confidence 45799999973 699999999999999999864 247889999874 456643 123489999999999998
Q ss_pred CCCcceEEEEeecc--CCC-ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCccc
Q 009127 269 QAPQDYYIVVSSRF--TPR-VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGM 345 (543)
Q Consensus 269 ~~~g~y~i~~~~~~--~~~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 345 (543)
.+|.||++|+... ..+ .....+.|.+..... .+ .. +....+. .. +|.+...... .
T Consensus 116 -~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~~-----~~-~~--d~e~~l~-l~--d~~~~~~~~~---~------- 173 (311)
T TIGR02376 116 -RPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREG-----LP-EY--DKEYYIG-ES--DLYTPKDEGE---G------- 173 (311)
T ss_pred -CCEEEEEEcCCCCchhHHhhcCcceEEEeeccCC-----Cc-Cc--ceeEEEe-ee--eEeccccccc---c-------
Confidence 6999999998532 111 123344455543221 11 00 1000000 00 0111100000 0
Q ss_pred ccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEE
Q 009127 346 IKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIV 425 (543)
Q Consensus 346 ~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~ 425 (543)
..+..............+.|||+.+.. .| .+.++.|++++|.
T Consensus 174 ----~~~~~~~~~~~~~~~~~~~iNG~~~~~--~~--------------------------------~~~v~~G~~~RlR 215 (311)
T TIGR02376 174 ----GAYEDDVAAMRTLTPTHVVFNGAVGAL--TG--------------------------------DNALTAGVGERVL 215 (311)
T ss_pred ----ccccchHHHHhcCCCCEEEECCccCCC--CC--------------------------------CcccccCCcEEEE
Confidence 000000000000111347888875410 00 1246789999999
Q ss_pred EEeCCC-CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCC-cceeEEeCCCCEEEEEEEecCcccceeeecchhhh-
Q 009127 426 FQNWED-TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTV-ARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQ- 502 (543)
Q Consensus 426 i~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~He- 502 (543)
|.|.+. ..+.||++|++|.++..++....+ +. ..|++.|.||+.+.|.++++.||.|++|||...|.
T Consensus 216 iiNa~~~~~~~~~~~g~~~~~v~~DG~~~~~----------~~~~~~~~~i~PG~R~dv~v~~~~pG~y~~~~~~~~~~~ 285 (311)
T TIGR02376 216 FVHSQPNRDSRPHLIGGHGDYVWVTGKFANP----------PNRDVETWFIPGGSAAAALYTFEQPGVYAYVDHNLIEAF 285 (311)
T ss_pred EEcCCCCCCCCCeEecCCceEEEECCcccCC----------CCCCcceEEECCCceEEEEEEeCCCeEEEEECcHHHHHH
Confidence 999976 568999999999999996543221 22 36999999999999999999999999999999887
Q ss_pred hcccEEEEEEec
Q 009127 503 YLGQQFYLRVYS 514 (543)
Q Consensus 503 d~GMm~~~~V~~ 514 (543)
..||++.++|..
T Consensus 286 ~~g~~~~i~~~g 297 (311)
T TIGR02376 286 EKGAAAQVKVEG 297 (311)
T ss_pred hCCCEEEEEECC
Confidence 779999998854
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.1e-16 Score=166.92 Aligned_cols=99 Identities=20% Similarity=0.336 Sum_probs=85.6
Q ss_pred eEEEEEECCcCCCc--eEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC---CCCCcCCCCCeEEEEEEeCC
Q 009127 46 KQQGILINGQFPGP--QIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY---GTTCPIPPGKNFTYVLQAKD 120 (543)
Q Consensus 46 ~~~~~~~Ng~~pgP--~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p---~tq~~i~PG~~~~y~f~~~~ 120 (543)
.+.+|+|||+.+++ .|++++||+|+|++.|.+...+.|||||+..... ..||.. .....|.||++++|+|++ +
T Consensus 484 ~~~~wtiNG~~~~~~~pl~v~~Gervri~l~N~t~~~HpmHlHG~~f~v~-~~~G~~~~~~dTv~V~Pg~t~~~~f~a-d 561 (587)
T TIGR01480 484 ERFAWSFDGEAFGLKTPLRFNYGERLRVVLVNDTMMAHPIHLHGMWSELE-DGQGEFQVRKHTVDVPPGGKRSFRVTA-D 561 (587)
T ss_pred ceeEEEECCccCCCCCceEecCCCEEEEEEECCCCCCcceeEcCceeeee-cCCCcccccCCceeeCCCCEEEEEEEC-C
Confidence 56789999998874 7999999999999999999999999999976432 336642 233789999999999999 5
Q ss_pred CcccceecCCchhhhhccceeEEEEe
Q 009127 121 QIGSYFYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 121 ~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (543)
++|+||||||...|...||++.+.|.
T Consensus 562 ~pG~w~~HCH~l~H~~~GM~~~~~v~ 587 (587)
T TIGR01480 562 ALGRWAYHCHMLLHMEAGMFREVTVR 587 (587)
T ss_pred CCeEEEEcCCCHHHHhCcCcEEEEeC
Confidence 79999999999999999999999874
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.6e-12 Score=111.72 Aligned_cols=97 Identities=19% Similarity=0.111 Sum_probs=78.6
Q ss_pred ccccCCCeEEEEEEEE--EEEe---cCCCeeEEEE-EECCcCCCceEEEecCCEEEEEEEECCCCCc--eeecCcccCCC
Q 009127 21 GVYGDSPYRFFTWKIT--YGDI---YPLGVKQQGI-LINGQFPGPQIDAVTNDNLIISVYNYLREPF--LISWNGLQQRR 92 (543)
Q Consensus 21 ~~~~~~~~~~~~l~~~--~~~~---~~~g~~~~~~-~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~--~iH~HG~~~~~ 92 (543)
+..+.++.++|+++|. +.++ ...|+....+ ++|+++..+.|+|++||+|++++.|..+.++ .+++||.
T Consensus 17 ~~~~~~~~~~f~~~i~~~~~~~~~~~~~~~~~~~i~a~n~~~~P~~I~VkaGD~Vtl~vtN~d~~~H~f~i~~~gi---- 92 (135)
T TIGR03096 17 MGTAQAAEQSFTVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPEALVVKKGTPVKVTVENKSPISEGFSIDAYGI---- 92 (135)
T ss_pred ccchhhccceeEEEEeccccEeeEEEeCCEEEEEEEeeeeEEcCCEEEECCCCEEEEEEEeCCCCccceEECCCCc----
Confidence 4456667789999999 6665 4678887666 9999999999999999999999999876543 4444432
Q ss_pred CCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCch
Q 009127 93 NSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL 132 (543)
Q Consensus 93 ~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (543)
+..|+||++.+|+|++ +++|+|||||-.+
T Consensus 93 ----------s~~I~pGet~TitF~a-dKpG~Y~y~C~~H 121 (135)
T TIGR03096 93 ----------SEVIKAGETKTISFKA-DKAGAFTIWCQLH 121 (135)
T ss_pred ----------ceEECCCCeEEEEEEC-CCCEEEEEeCCCC
Confidence 2568999999999999 5899999999754
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3e-11 Score=129.66 Aligned_cols=231 Identities=18% Similarity=0.192 Sum_probs=141.8
Q ss_pred EEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeec-CcccCCCCCCCCCCCC------CCCcCCCCCeEEEEEEe
Q 009127 47 QQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISW-NGLQQRRNSWQDGVYG------TTCPIPPGKNFTYVLQA 118 (543)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~-HG~~~~~~~~~DG~p~------tq~~i~PG~~~~y~f~~ 118 (543)
...+++||+. .|.+.++ |.++|+|+.|... ....+.+ .|..+. ....||.+. ....|.|||+++..+++
T Consensus 212 gd~~lVNG~~-~p~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~-vIa~DG~~l~~P~~v~~l~lapGeR~dvlv~~ 288 (523)
T PRK10965 212 GDTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLY-VIASDGGLLAEPVKVSELPILMGERFEVLVDT 288 (523)
T ss_pred CCeEEECCcc-cceeecC-CCEEEEEEEeccCCceEEEEEcCCceEE-EEEeCCCcccCccEeCeEEECccceEEEEEEc
Confidence 3568999996 7898885 6699999999965 4456665 443222 246898542 33569999999999998
Q ss_pred CCCcccceecCCchhhhh------ccceeEEEEecCC---CCCCC-----CCCC-------CCceEEEeeeeee------
Q 009127 119 KDQIGSYFYFPSFLFHKA------AGAFGGIRIWSRP---RIPVP-----FPPP-------AGDFTVLAGDWYR------ 171 (543)
Q Consensus 119 ~~~~Gt~wYH~H~~~q~~------~Gl~G~liV~~~~---~~~~~-----~~~~-------~~e~~l~~~d~~~------ 171 (543)
. +.|.++...-...+.. +.-+-.+.|.... ..+.| .+.. .+.+.+.+..+..
T Consensus 289 ~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~r~~~l~~~~~~~~~~m~~ 367 (523)
T PRK10965 289 S-DGKAFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSLASLPALPSLEGLTVRRLQLSMDPRLDMMGMQM 367 (523)
T ss_pred C-CCceEEEEEecccCcccccccCCCceeEEEEeccCcCCCCcCChhhccCCCCCcccccceeEEEEeeccccchhhhhh
Confidence 5 5677776653211111 0011123333211 10110 0000 0122222211100
Q ss_pred ----ccHHHHHH--------Hh--------ccCC--CCCCC---CeEEEcCCCC--CcceEEEecCCEEEEEEEEcCCcc
Q 009127 172 ----SNHYVLRR--------LL--------DSGH--NLPFP---DGLLINGRGW--NGYTFTVEPGRTYRFRISNVGLTT 224 (543)
Q Consensus 172 ----~~~~~~~~--------~~--------~~g~--~~~~~---~~~liNG~~~--~~p~~~v~~G~~~rlRiiN~~~~~ 224 (543)
........ .+ +.+. ..+.. ..++|||+.+ ..+.++++.|++++|+|+|.+...
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~~~~~~~G~~e~w~i~N~~~~~ 447 (523)
T PRK10965 368 LMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKINGKAFDMNKPMFAAKKGQYERWVISGVGDMM 447 (523)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCCCeECCCCCcceecCCCCEEEEEEEeCCCCC
Confidence 00000000 00 0000 00001 1248999986 356689999999999999999755
Q ss_pred eEEEEEeCCeeEEEEEcCcccc---ccccCeEEEcCCCeEEEEEEeCC---CCcceEEEEeecc
Q 009127 225 SINFRIQGHSMKLVEVEGSHTL---QNTYAALDIHLGQTYSVLVTMDQ---APQDYYIVVSSRF 282 (543)
Q Consensus 225 ~~~~~i~g~~~~via~DG~~~~---p~~~~~v~l~pgeR~dv~v~~~~---~~g~y~i~~~~~~ 282 (543)
.|+|||||++|+|++.||.+.. +.+.|+|.+.| ++++++++++. .+|.|.++|+...
T Consensus 448 ~Hp~HlHg~~F~Vl~~~g~~~~~~~~~wkDTv~v~~-~~~~i~~~f~~~~~~~g~~~~HCHiL~ 510 (523)
T PRK10965 448 LHPFHIHGTQFRILSENGKPPAAHRAGWKDTVRVEG-GRSEVLVKFDHDAPKEHAYMAHCHLLE 510 (523)
T ss_pred ccCeEEeCcEEEEEEecCCCCCccccccccEEEECC-cEEEEEEEecCCCCCCCCEEEEeCchh
Confidence 7999999999999999998764 35689999976 88999999973 4579999998753
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-10 Score=124.96 Aligned_cols=234 Identities=12% Similarity=0.147 Sum_probs=143.7
Q ss_pred EEEEECCcC-C--------CceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeE
Q 009127 48 QGILINGQF-P--------GPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNF 112 (543)
Q Consensus 48 ~~~~~Ng~~-p--------gP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~ 112 (543)
..+++||+. + .++|+|++|+++++|+.|... ....+|.+|..+.. .+.||++. ....|.|||++
T Consensus 167 d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~V-Ia~DG~~~~P~~~~~l~i~~GqRy 245 (539)
T TIGR03389 167 DAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTV-VEVDATYTKPFKTKTIVIGPGQTT 245 (539)
T ss_pred ceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEE-EEeCCcccCceEeCeEEecCCCEE
Confidence 568999984 1 248999999999999999964 45678888876543 57899863 23569999999
Q ss_pred EEEEEeCCCcccceecCCch--hh--hh-ccceeEEEEecCCCCCCCC----CCCCC---------ceE-EEeeeeee--
Q 009127 113 TYVLQAKDQIGSYFYFPSFL--FH--KA-AGAFGGIRIWSRPRIPVPF----PPPAG---------DFT-VLAGDWYR-- 171 (543)
Q Consensus 113 ~y~f~~~~~~Gt~wYH~H~~--~q--~~-~Gl~G~liV~~~~~~~~~~----~~~~~---------e~~-l~~~d~~~-- 171 (543)
+..+++.+.+|.||.+.+.. .+ .. ..-.+.|..++....+.+. +..+. ++. +....+..
T Consensus 246 dVlv~a~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 325 (539)
T TIGR03389 246 NVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYNDTAAATNFSNKLRSLNSAQYPANV 325 (539)
T ss_pred EEEEECCCCCceEEEEEeccccCccCCCCcceEEEEEECCCCCCCCCCCCCCCCCCchhhhhHHHhhcccccccCCCCCC
Confidence 99999954589999998742 11 11 1123333333322211110 00000 000 00000000
Q ss_pred -cc-HH----HHHHHhccCC-----C-CCCCCeEEEcCCCC---------------------------------------
Q 009127 172 -SN-HY----VLRRLLDSGH-----N-LPFPDGLLINGRGW--------------------------------------- 200 (543)
Q Consensus 172 -~~-~~----~~~~~~~~g~-----~-~~~~~~~liNG~~~--------------------------------------- 200 (543)
.. +. .+...+.... . ....-.+.|||..+
T Consensus 326 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 405 (539)
T TIGR03389 326 PVTIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLP 405 (539)
T ss_pred CCCCCeEEEEEeecccccCcccccccCCCcEEEEEECCcccCCCCcchhhhhhcccCCccccCCccCCCccccCCCCCcc
Confidence 00 00 0000000000 0 00001235555431
Q ss_pred -------CcceEEEecCCEEEEEEEEcCC--cceEEEEEeCCeeEEEEEc-Ccc-----------ccccccCeEEEcCCC
Q 009127 201 -------NGYTFTVEPGRTYRFRISNVGL--TTSINFRIQGHSMKLVEVE-GSH-----------TLQNTYAALDIHLGQ 259 (543)
Q Consensus 201 -------~~p~~~v~~G~~~rlRiiN~~~--~~~~~~~i~g~~~~via~D-G~~-----------~~p~~~~~v~l~pge 259 (543)
....+.++.|+++++.|.|.+. ...|+||||||.|+|++.+ |.+ ..|...|++.+.++.
T Consensus 406 ~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~~~nl~nP~rRDTv~vp~~g 485 (539)
T TIGR03389 406 NNLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGG 485 (539)
T ss_pred cccccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCccccccCCCCeeeeEEcCCCc
Confidence 0123677889999999999753 3379999999999999986 332 237778999999999
Q ss_pred eEEEEEEeCCCCcceEEEEeeccC
Q 009127 260 TYSVLVTMDQAPQDYYIVVSSRFT 283 (543)
Q Consensus 260 R~dv~v~~~~~~g~y~i~~~~~~~ 283 (543)
-+-+.++++ +||.|.+||+....
T Consensus 486 ~vvirf~ad-NPG~W~~HCHi~~H 508 (539)
T TIGR03389 486 WAAIRFVAD-NPGVWFMHCHLEVH 508 (539)
T ss_pred eEEEEEecC-CCeEEEEEecccch
Confidence 999999999 79999999997654
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-10 Score=125.27 Aligned_cols=245 Identities=13% Similarity=0.101 Sum_probs=150.5
Q ss_pred EEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeEEEEEEeCC
Q 009127 47 QQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNFTYVLQAKD 120 (543)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~~y~f~~~~ 120 (543)
...+++||+. .|+++|++|+++++|+.|... ....+|+.|..+. ..+.||.+. ....|.|||+++.-+++.+
T Consensus 191 ~d~~liNG~~-~~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~-VI~~DG~~v~p~~~~~l~i~~GqRydvlv~~~~ 268 (539)
T PLN02835 191 PDGVLINGQT-QSTFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMK-LVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQ 268 (539)
T ss_pred CceEEEcccc-CceEEECCCCEEEEEEEEcCCCccEEEEECCCEEE-EEEECCccCCCceeeEEEECcCceEEEEEEcCC
Confidence 3678999997 589999999999999999975 4678888887654 357899864 2355999999999999965
Q ss_pred CcccceecCCchhh-hhccceeEEEEecCCC---CCCCC-CCCCC--c------eEEEeeeeeeccHH----HH-----H
Q 009127 121 QIGSYFYFPSFLFH-KAAGAFGGIRIWSRPR---IPVPF-PPPAG--D------FTVLAGDWYRSNHY----VL-----R 178 (543)
Q Consensus 121 ~~Gt~wYH~H~~~q-~~~Gl~G~liV~~~~~---~~~~~-~~~~~--e------~~l~~~d~~~~~~~----~~-----~ 178 (543)
.+|.||.+.-.... ......+.|-.++... .+.|. +..+. + ....+......... .. .
T Consensus 269 ~~g~y~i~a~~~~~~~~~~~~ail~Y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~ 348 (539)
T PLN02835 269 SPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPT 348 (539)
T ss_pred CCCcEEEEEEccccCCCcceEEEEEECCCCCCCCCCCCCCCccccccccchhhccccccCccccCCCCCccccccccCCC
Confidence 58999998632111 1112234444433211 01111 00000 0 00000000000000 00 0
Q ss_pred HH--hccCCCC-CCCCeEEEcCCCCC---cc--------------------------------eEEEecCCEEEEEEEEc
Q 009127 179 RL--LDSGHNL-PFPDGLLINGRGWN---GY--------------------------------TFTVEPGRTYRFRISNV 220 (543)
Q Consensus 179 ~~--~~~g~~~-~~~~~~liNG~~~~---~p--------------------------------~~~v~~G~~~rlRiiN~ 220 (543)
.. +...... .....|.+||..+. .| .+.++.|+.+.|-|-|.
T Consensus 349 ~~~~~~~~~~~~~g~~~w~iN~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~Veivi~N~ 428 (539)
T PLN02835 349 KTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDFLEVVFQNN 428 (539)
T ss_pred ceEEEeccccccCCeEEEEECCcccCCCCCChhhhhhhcCCCccccCccccCCCCCccccCCeEEEcCCCCEEEEEEECC
Confidence 00 0000000 00124667776641 11 23445677889999998
Q ss_pred CCcceEEEEEeCCeeEEEEE-cCcc----------ccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccce
Q 009127 221 GLTTSINFRIQGHSMKLVEV-EGSH----------TLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTT 289 (543)
Q Consensus 221 ~~~~~~~~~i~g~~~~via~-DG~~----------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~ 289 (543)
+.. .|+||||||.|+|++. +|.+ ..|...|++.+.+++.+-+.|+++ +||.|.++|+.... .....
T Consensus 429 ~~~-~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP~~RDTv~vp~~gw~~IrF~aD-NPG~Wl~HCHi~~H-~~~Gm 505 (539)
T PLN02835 429 EKT-MQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLD-NQGMWNMRSAIWER-QYLGQ 505 (539)
T ss_pred CCC-CCCCCCCCccEEEEeccCCCCCcccccccCCCCCCccceEEeCCCCEEEEEEECc-CCEEeeeeecchhh-hhccc
Confidence 765 7999999999999987 5532 248899999999999999999999 79999999987432 22233
Q ss_pred EEEEEec
Q 009127 290 TAILHYS 296 (543)
Q Consensus 290 ~~il~y~ 296 (543)
..++++.
T Consensus 506 ~~~~~V~ 512 (539)
T PLN02835 506 QFYLRVW 512 (539)
T ss_pred EEEEEEc
Confidence 4455554
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-10 Score=124.22 Aligned_cols=221 Identities=13% Similarity=0.126 Sum_probs=135.3
Q ss_pred eeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeec-CcccCCCCCCCCCCC----C--CCCcCCCCCeEEEEE
Q 009127 45 VKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISW-NGLQQRRNSWQDGVY----G--TTCPIPPGKNFTYVL 116 (543)
Q Consensus 45 ~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~-HG~~~~~~~~~DG~p----~--tq~~i~PG~~~~y~f 116 (543)
.....+++||+. .|.|.|+.| ++++|+.|... ....+++ .|.... ....||.+ . .+..|.|||+++.-.
T Consensus 207 ~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNas~~~~~~l~l~d~~~~~-vIa~DGg~~~~P~~~~~l~l~pGeR~dvlV 283 (471)
T PRK10883 207 FVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNARRYQLQMSDGRPLH-VIAGDQGFLPAPVSVKQLSLAPGERREILV 283 (471)
T ss_pred ccCCeeEECCcc-CCeEEecCC-EEEEEEEEccCCceEEEEEcCCCeEE-EEEeCCCcccCCcEeCeEEECCCCeEEEEE
Confidence 345679999996 799999875 89999999976 4567777 554322 24678543 2 345689999999999
Q ss_pred EeCCCcccceecCCchhhhhcccee------------EEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHH-Hhcc
Q 009127 117 QAKDQIGSYFYFPSFLFHKAAGAFG------------GIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRR-LLDS 183 (543)
Q Consensus 117 ~~~~~~Gt~wYH~H~~~q~~~Gl~G------------~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~-~~~~ 183 (543)
++. +.+.+.+++-......+++.+ .+-++.....+ .. ...++..+............. .+..
T Consensus 284 d~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~p~~l~~~~~~~~~~~~~~~~~l 358 (471)
T PRK10883 284 DMS-NGDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLLP-LV---TDNLPMRLLPDEIMEGSPIRSREISL 358 (471)
T ss_pred ECC-CCceEEEECCCccccccccccccCCccccccceeEEEEcccccc-CC---CCcCChhhcCCCCCCCCCcceEEEEe
Confidence 984 566777766321111111111 11111111000 00 000010000000000000000 0000
Q ss_pred CCCCCCCCeEEEcCCCCC--cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccc---cccCeEEEcCC
Q 009127 184 GHNLPFPDGLLINGRGWN--GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQ---NTYAALDIHLG 258 (543)
Q Consensus 184 g~~~~~~~~~liNG~~~~--~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p---~~~~~v~l~pg 258 (543)
+ .+.++|||+.++ .+.++++.|++++|+|.|.. .|+||||+++|+|++.||....| .+.|+|.+.
T Consensus 359 ~-----~~~~~INg~~~~~~~~~~~~~~g~~e~W~~~n~~---~HP~HlHg~~FqVl~~~G~~~~~~~~gwkDTV~v~-- 428 (471)
T PRK10883 359 G-----DDLPGINGALWDMNRIDVTAQQGTWERWTVRADM---PQAFHIEGVMFLIRNVNGAMPFPEDRGWKDTVWVD-- 428 (471)
T ss_pred c-----CCcCccCCcccCCCcceeecCCCCEEEEEEECCC---CcCEeECCccEEEEEecCCCCCccccCcCcEEEcC--
Confidence 0 123479999863 33468999999999998862 69999999999999999986543 457999993
Q ss_pred CeEEEEEEeCCCCc---ceEEEEeeccC
Q 009127 259 QTYSVLVTMDQAPQ---DYYIVVSSRFT 283 (543)
Q Consensus 259 eR~dv~v~~~~~~g---~y~i~~~~~~~ 283 (543)
+++.+++++++..+ .|.++|+....
T Consensus 429 ~~v~i~~~f~~~~~~~~~~m~HCHiLeH 456 (471)
T PRK10883 429 GQVELLVYFGQPSWAHFPFLFYSQTLEM 456 (471)
T ss_pred CeEEEEEEecCCCCCCCcEEeecccccc
Confidence 57999999996444 79999987543
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.6e-09 Score=115.43 Aligned_cols=229 Identities=16% Similarity=0.156 Sum_probs=146.9
Q ss_pred CeeEEEEEECCcCCCceEEEecCCEEEEEEEECC-CCCceeecCcccCCCCCCCCCCC----C-CCCcCCCCCeEEEEEE
Q 009127 44 GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYL-REPFLISWNGLQQRRNSWQDGVY----G-TTCPIPPGKNFTYVLQ 117 (543)
Q Consensus 44 g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~~~DG~p----~-tq~~i~PG~~~~y~f~ 117 (543)
|.......+||+. -| +.+.++..+++|+.|.- .....+++.|..... ...||.+ . .+..+.|||+++....
T Consensus 186 ~~~g~~~~vnG~~-~p-~~~~~~g~~rlRl~n~~~~~~~~~~~~~~~~~V-i~~DG~~v~~~~~d~~~l~p~er~~v~v~ 262 (451)
T COG2132 186 GFPGDTLLVNGAI-LP-FKAVPGGVVRLRLLNAGNARTYHLALGGGPLTV-IAVDGGPLPPVSVDELYLAPGERYEVLVD 262 (451)
T ss_pred CCCCCeEEECCCc-cc-eeecCCCeEEEEEEecCCceEEEEEecCceEEE-EEeCCcCcCceeeeeEEecCcceEEEEEE
Confidence 4456677888855 24 44555566999999997 555666666555432 3567766 2 4567999999999999
Q ss_pred eCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeee-eeccHHHHHHHh-ccC----C-----C
Q 009127 118 AKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDW-YRSNHYVLRRLL-DSG----H-----N 186 (543)
Q Consensus 118 ~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~-~~~~~~~~~~~~-~~g----~-----~ 186 (543)
.. ..|++-+.|.. .+..+-+.+..-....... ++...+.+......|- ...........+ +.+ . .
T Consensus 263 ~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 338 (451)
T COG2132 263 MN-DGGAVTLTALG-EDMPDTLKGFRAPNPILTP--SYPVLNGRVGAPTGDMADHAPVGLLVTILVEPGPNRDTDFHLIG 338 (451)
T ss_pred cC-CCCeEEEEecc-ccCCceeeeeecccccccc--ccccccccccCCCcchhhccccccchhhcCCCcccccccchhhc
Confidence 86 48899998876 3333333333322221110 0111111111111110 000000000000 000 0 0
Q ss_pred CCCCCeEEEcCCCCC--cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccc---cccccCeEEEcCCCeE
Q 009127 187 LPFPDGLLINGRGWN--GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT---LQNTYAALDIHLGQTY 261 (543)
Q Consensus 187 ~~~~~~~liNG~~~~--~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~---~p~~~~~v~l~pgeR~ 261 (543)
......+.+||+.++ .+.+.++.|+++||+|.|-+. ..|+||+||+.|+|++.| ... .+..+|++.+.|++++
T Consensus 339 ~~~~~~~~~n~~~~~~~~~~~~~~~G~~~~~~i~n~~~-~~HP~HlHg~~F~v~~~~-~~~~~~~~~~kDTv~v~~~~~~ 416 (451)
T COG2132 339 GIGGYVWAINGKAFDDNRVTLIAKAGTRERWVLTNDTP-MPHPFHLHGHFFQVLSGD-APAPGAAPGWKDTVLVAPGERL 416 (451)
T ss_pred ccccccccccCccCCCCcCceeecCCCEEEEEEECCCC-CccCeEEcCceEEEEecC-CCcccccCccceEEEeCCCeEE
Confidence 012346899999873 467899999999999999998 589999999999999999 222 3577899999999999
Q ss_pred EEEEEeCCCCcceEEEEeecc
Q 009127 262 SVLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 262 dv~v~~~~~~g~y~i~~~~~~ 282 (543)
.+.++++ .+|.|.++|+...
T Consensus 417 ~v~~~a~-~~g~~~~HCH~l~ 436 (451)
T COG2132 417 LVRFDAD-YPGPWMFHCHILE 436 (451)
T ss_pred EEEEeCC-CCCceEEeccchh
Confidence 9999999 6889999998754
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.6e-09 Score=112.35 Aligned_cols=221 Identities=11% Similarity=0.079 Sum_probs=132.2
Q ss_pred ceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeEEEEEEeCCCc-ccceecCCc
Q 009127 59 PQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNFTYVLQAKDQI-GSYFYFPSF 131 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~~y~f~~~~~~-Gt~wYH~H~ 131 (543)
++|.|++|+++++|+.|... ....+++.|..+. ..+.||.+. ....|.|||+++.-+++.+.+ |.||.+.-.
T Consensus 203 ~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~-VIa~DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~ 281 (541)
T TIGR03388 203 QILHVEPGKTYRLRIASTTALAALNFAIEGHKLT-VVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGV 281 (541)
T ss_pred eEEEECCCCEEEEEEEcccccceEEEEECCCEEE-EEEeCCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEec
Confidence 35899999999999999863 5667777776553 357899763 235599999999999995334 589998653
Q ss_pred hhh---hhccceeEEEEecCC-CCCCC---C---CCCCC-------ceEEEeeeeeeccHHHHHHH--h-ccCCCCCCCC
Q 009127 132 LFH---KAAGAFGGIRIWSRP-RIPVP---F---PPPAG-------DFTVLAGDWYRSNHYVLRRL--L-DSGHNLPFPD 191 (543)
Q Consensus 132 ~~q---~~~Gl~G~liV~~~~-~~~~~---~---~~~~~-------e~~l~~~d~~~~~~~~~~~~--~-~~g~~~~~~~ 191 (543)
..+ ...+ .+++..... ....+ . +..+. +..++-.............. + ..+.......
T Consensus 282 ~~~~~~~~~~--~aiL~Y~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (541)
T TIGR03388 282 RGRKPNTPPG--LTVLNYYPNSPSRLPPTPPPVTPAWDDFDRSKAFSLAIKAAMGSPKPPETSDRRIVLLNTQNKINGYT 359 (541)
T ss_pred ccCCCCCccE--EEEEEECCCCCCCCCCCCCCCCCCccccchhhccchhhhccccCCCCCCCCCcEEEEeccCcccCceE
Confidence 322 1122 244443221 10000 0 00000 00000000000000000000 0 0000000011
Q ss_pred eEEEcCCCCC---------------------------------------------cceEEEecCCEEEEEEEEcCC----
Q 009127 192 GLLINGRGWN---------------------------------------------GYTFTVEPGRTYRFRISNVGL---- 222 (543)
Q Consensus 192 ~~liNG~~~~---------------------------------------------~p~~~v~~G~~~rlRiiN~~~---- 222 (543)
.+.+||..+. .-.+.++.|++|.+.|.|...
T Consensus 360 ~~~~n~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~ 439 (541)
T TIGR03388 360 KWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGN 439 (541)
T ss_pred EEEECcccCCCCCccHHHHHhhcCCccccCCCCcccccccccccCCCcccccccCceEEEecCCCeEEEEEECCccccCC
Confidence 2445554320 123677889999999999752
Q ss_pred -cceEEEEEeCCeeEEEEEc-Ccc-----------ccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccC
Q 009127 223 -TTSINFRIQGHSMKLVEVE-GSH-----------TLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFT 283 (543)
Q Consensus 223 -~~~~~~~i~g~~~~via~D-G~~-----------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~ 283 (543)
...|+||||||.|+|++.+ |.+ ..|...|++.+.++.-+-+.|+++ +||.|.+||+....
T Consensus 440 ~~~~HP~HLHGh~F~vlg~g~g~~~~~~~~~~~n~~nP~~RDTv~vp~~gwvvIRF~ad-NPG~W~~HCHi~~H 512 (541)
T TIGR03388 440 NSETHPWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVAD-NPGVWAFHCHIEPH 512 (541)
T ss_pred CCCCCcEEecCCceEEEeeccCCCCcccCcccccCCCCCEeceEEeCCCceEEEEEECC-CCeEeeeeccchhh
Confidence 3479999999999999987 433 147788999999999999999999 79999999987644
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.8e-08 Score=108.47 Aligned_cols=228 Identities=14% Similarity=0.130 Sum_probs=136.7
Q ss_pred CeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEE-EEcCccccccccCeEEEcCCCeEEEEEEeCC
Q 009127 191 DGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLV-EVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ 269 (543)
Q Consensus 191 ~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~vi-a~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 269 (543)
..++|||+.. .|.|+++.|+++++++.|-... ...+|.||....-- ..||.+. + +-.|.||+.+...|++++
T Consensus 36 ~~~~vNGq~P-GP~I~~~~GD~v~V~v~N~L~~-~ttiHWHGl~q~~~~~~DGv~~----t-qcPI~PG~sftY~F~~~~ 108 (536)
T PLN02792 36 RGILINGQFP-GPEIRSLTNDNLVINVHNDLDE-PFLLSWNGVHMRKNSYQDGVYG----T-TCPIPPGKNYTYDFQVKD 108 (536)
T ss_pred EEEEECCCCC-CCcEEEECCCEEEEEEEeCCCC-CcCEeCCCcccCCCCccCCCCC----C-cCccCCCCcEEEEEEeCC
Confidence 5799999974 7999999999999999999764 45555555443222 2799542 2 258999999999999965
Q ss_pred CCcceEEEEeeccCCCccceEEEE-EecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcccccc
Q 009127 270 APQDYYIVVSSRFTPRVLTTTAIL-HYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKI 348 (543)
Q Consensus 270 ~~g~y~i~~~~~~~~~~~~~~~il-~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~ 348 (543)
.+|+||.+++.... ......|-| .+.....+ .+.+. +..+.. .-+.+..... . ...
T Consensus 109 q~GT~WYHsH~~~q-~~~Gl~G~liI~~~~~~~--~p~~~-~d~e~~----------i~l~Dw~~~~--~-------~~~ 165 (536)
T PLN02792 109 QVGSYFYFPSLAVQ-KAAGGYGSLRIYSLPRIP--VPFPE-PAGDFT----------FLIGDWYRRN--H-------TTL 165 (536)
T ss_pred CccceEEecCcchh-hhcccccceEEeCCcccC--cCCCc-ccceeE----------EEecccccCC--H-------HHH
Confidence 69999999986321 112233322 23211111 01110 000000 0011100000 0 000
Q ss_pred eEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEe
Q 009127 349 SRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQN 428 (543)
Q Consensus 349 ~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N 428 (543)
...+ ........-.....|||+... ....++++.|++++|+|.|
T Consensus 166 ~~~~--~~g~~~~~~~d~~liNG~~~~----------------------------------~~~~~~v~~Gk~yRlRliN 209 (536)
T PLN02792 166 KKIL--DGGRKLPLMPDGVMINGQGVS----------------------------------YVYSITVDKGKTYRFRISN 209 (536)
T ss_pred HHHh--hccCcCCCCCCEEEEeccCCC----------------------------------CcceEEECCCCEEEEEEEE
Confidence 0000 000000000123667766321 0124678899999999999
Q ss_pred CCCC-CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC-cccceee
Q 009127 429 WEDT-VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN-VGMWNIR 495 (543)
Q Consensus 429 ~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn-pG~w~~H 495 (543)
.+.. ..-|+|.||+|.|++.++... .|...|++.|.+|+.+.+.++++. +|.|-+.
T Consensus 210 a~~~~~~~f~i~gH~~tVI~~DG~~v-----------~p~~~~~l~i~~GqRydVlV~a~~~~g~Y~i~ 267 (536)
T PLN02792 210 VGLQTSLNFEILGHQLKLIEVEGTHT-----------VQSMYTSLDIHVGQTYSVLVTMDQPPQNYSIV 267 (536)
T ss_pred cCCCceEEEEECCcEEEEEEeCCccC-----------CCcceeEEEEccCceEEEEEEcCCCCceEEEE
Confidence 9765 589999999999999976422 244569999999999999999976 4765544
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.5e-08 Score=109.69 Aligned_cols=233 Identities=12% Similarity=0.075 Sum_probs=141.8
Q ss_pred CeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEE-EEEcCccccccccCeEEEcCCCeEEEEEEeCC
Q 009127 191 DGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKL-VEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ 269 (543)
Q Consensus 191 ~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~v-ia~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 269 (543)
..++|||+.. .|.|+++.|+++++++.|.... ...+|.||....- -..||.+. ..-.|.||+.+...|++++
T Consensus 47 ~~~~iNGq~P-GP~I~~~~GD~v~V~v~N~l~~-~ttiHWHGi~q~~~~~~DGv~~-----TQcpI~PG~sf~Y~F~~~~ 119 (552)
T PLN02354 47 QVILINGQFP-GPNINSTSNNNIVINVFNNLDE-PFLLTWSGIQQRKNSWQDGVPG-----TNCPIPPGTNFTYHFQPKD 119 (552)
T ss_pred EEEEECCCCc-CCcEEEeCCCEEEEEEEECCCC-CcccccccccCCCCcccCCCcC-----CcCCCCCCCcEEEEEEeCC
Confidence 5799999974 7999999999999999999864 4556666654432 24788542 3458999999999999864
Q ss_pred CCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCC-CCCccccccccccccccccCCCCCCCCCCCCCCcccccc
Q 009127 270 APQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGG-PTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKI 348 (543)
Q Consensus 270 ~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~-p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~ 348 (543)
.+|+||.+++.... ......|-|...+... .+.|.. +..+.. .-+....-.. . ...
T Consensus 120 q~GT~WYHsH~~~Q-~~~Gl~G~lII~~~~~---~~~p~~~~d~e~~----------l~l~Dw~~~~--~-------~~~ 176 (552)
T PLN02354 120 QIGSYFYYPSTGMH-RAAGGFGGLRVNSRLL---IPVPYADPEDDYT----------VLIGDWYTKS--H-------TAL 176 (552)
T ss_pred CCcceEEecCccce-ecCCccceEEEcCCcC---CCCCCCCcCceEE----------EEeeeeccCC--H-------HHH
Confidence 68999999875321 1112333333332211 011110 000000 0000000000 0 000
Q ss_pred eEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEe
Q 009127 349 SRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQN 428 (543)
Q Consensus 349 ~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N 428 (543)
...+.... .........|||+..... . .....++++.|++++|+|+|
T Consensus 177 ~~~~~~g~---~~~~~d~~liNG~~~~~~----------------~--------------~~~~~~~v~~Gk~yRlRiIN 223 (552)
T PLN02354 177 KKFLDSGR---TLGRPDGVLINGKSGKGD----------------G--------------KDEPLFTMKPGKTYRYRICN 223 (552)
T ss_pred HHHHhcCC---CCCCCCeEEEeCCcCCCC----------------C--------------CCceEEEECCCCEEEEEEEe
Confidence 00000000 000112467777632100 0 01235788999999999999
Q ss_pred CCCC-CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC-cccceeeec
Q 009127 429 WEDT-VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN-VGMWNIRSE 497 (543)
Q Consensus 429 ~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn-pG~w~~HCH 497 (543)
.+.. ..-|||.||+|.||+.++... .|...|++.|.+|+...+.++++. +|.|-+.-.
T Consensus 224 a~~~~~~~f~IdgH~~tVIa~DG~~v-----------~p~~~~~l~i~~GqRydVlv~a~~~~g~Y~i~a~ 283 (552)
T PLN02354 224 VGLKSSLNFRIQGHKMKLVEMEGSHV-----------LQNDYDSLDVHVGQCFSVLVTANQAPKDYYMVAS 283 (552)
T ss_pred cCCCceEEEEECCceEEEEEeCCccc-----------CCcceeEEEEccCceEEEEEECCCCCCcEEEEEe
Confidence 8755 588999999999999976432 244569999999999999999975 788776654
|
|
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.2e-08 Score=111.15 Aligned_cols=222 Identities=12% Similarity=0.162 Sum_probs=132.5
Q ss_pred ceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeEEEEEEeCCCcc-cceecCCc
Q 009127 59 PQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNFTYVLQAKDQIG-SYFYFPSF 131 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~~y~f~~~~~~G-t~wYH~H~ 131 (543)
++|.+++|+++++|+.|... ....+++-|..+. ..+.||.+. ....|.|||+++.-+++.+.+| .||-+...
T Consensus 224 ~~~~v~~g~~~RlRlINa~~~~~~~~sidgH~~~-VIa~DG~~v~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~ 302 (566)
T PLN02604 224 YVLTVVPGKTYRLRISSLTALSALSFQIEGHNMT-VVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSV 302 (566)
T ss_pred eEEEecCCCEEEEEEEeccccceEEEEECCCEEE-EEEeCCEecccceeeeEEEccCCeEEEEEECCCCCCCCEEEEEec
Confidence 58999999999999999965 4556666666543 357899774 2356999999999999954445 79998642
Q ss_pred h---hhhhccceeEEEEecCCC-CCCCCCCC----CCceEEEeee---------eeeccHHHHHHHh---ccCCCCCCCC
Q 009127 132 L---FHKAAGAFGGIRIWSRPR-IPVPFPPP----AGDFTVLAGD---------WYRSNHYVLRRLL---DSGHNLPFPD 191 (543)
Q Consensus 132 ~---~q~~~Gl~G~liV~~~~~-~~~~~~~~----~~e~~l~~~d---------~~~~~~~~~~~~~---~~g~~~~~~~ 191 (543)
. .|...| .+.|-.++... .+.+.... -.+....+.. ............. ..........
T Consensus 303 ~~~~~~~~~~-~aIL~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 381 (566)
T PLN02604 303 VSRNNTTPPG-LAIFNYYPNHPRRSPPTVPPSGPLWNDVEPRLNQSLAIKARHGYIHPPPLTSDRVIVLLNTQNEVNGYR 381 (566)
T ss_pred ccCCCCCcce-eEEEEECCCCCCCCCCCCCCCCCcccccchhhcchhcccccccCcCCCCCCCCeEEEEeccccccCCeE
Confidence 2 133333 23333332111 10010000 0000000000 0000000000000 0000000011
Q ss_pred eEEEcCCCCC----------------------------------------------cceEEEecCCEEEEEEEEcCC---
Q 009127 192 GLLINGRGWN----------------------------------------------GYTFTVEPGRTYRFRISNVGL--- 222 (543)
Q Consensus 192 ~~liNG~~~~----------------------------------------------~p~~~v~~G~~~rlRiiN~~~--- 222 (543)
.|.|||..+. ...+.++.|++|.+.|.|...
T Consensus 382 ~w~in~~~~~~p~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~ 461 (566)
T PLN02604 382 RWSVNNVSFNLPHTPYLIALKENLTGAFDQTPPPEGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNA 461 (566)
T ss_pred EEEECcccCCCCCCchhHhhhhcCCCcccCCCCCcccccccccccCCccccccccCceEEEccCCCeEEEEEECCccccC
Confidence 3455554320 113677889999999999752
Q ss_pred --cceEEEEEeCCeeEEEEEc-Ccc-----------ccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccC
Q 009127 223 --TTSINFRIQGHSMKLVEVE-GSH-----------TLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFT 283 (543)
Q Consensus 223 --~~~~~~~i~g~~~~via~D-G~~-----------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~ 283 (543)
...|+||+|||.|+|++.+ |.+ ..|...|++.+.++.-+-|.++++ +||.|.+||+....
T Consensus 462 ~~~~~HP~HLHGH~F~Vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp~~gwvvIRF~aD-NPG~WlfHCHI~~H 535 (566)
T PLN02604 462 NNSETHPWHLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRAD-NPGVWAFHCHIESH 535 (566)
T ss_pred CCCCCCCEEecCCceEEEEecCCCCCccccccccCCCCCCccceEEeCCCceEEEEEECC-CCeEeeEeecchhH
Confidence 3479999999999999987 432 137778999999999999999998 79999999987543
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.8e-08 Score=108.47 Aligned_cols=224 Identities=13% Similarity=0.105 Sum_probs=137.2
Q ss_pred CeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeE-EEEEcCccccccccCeEEEcCCCeEEEEEEeCC
Q 009127 191 DGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMK-LVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ 269 (543)
Q Consensus 191 ~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~-via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 269 (543)
..++|||+.. .|.++++.|+++++++.|.... ...+|.||.... --..||.+ . + .-.|.||+++...|++++
T Consensus 48 ~~~~vNG~~P-GP~I~~~~GD~v~V~V~N~L~~-~ttiHWHGi~q~~~~~~DGv~---~-t-QcpI~PG~sftY~F~~~~ 120 (543)
T PLN02991 48 QGILINGKFP-GPDIISVTNDNLIINVFNHLDE-PFLISWSGIRNWRNSYQDGVY---G-T-TCPIPPGKNYTYALQVKD 120 (543)
T ss_pred EEEEEcCCCC-CCcEEEECCCEEEEEecCCCCC-CccEEECCcccCCCccccCCC---C-C-CCccCCCCcEEEEEEeCC
Confidence 4799999974 7999999999999999999864 556777776542 23479964 2 2 457999999999999965
Q ss_pred CCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCC-CCCCccccccccccccccccCCCCCCCCCCCCCCcccccc
Q 009127 270 APQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPG-GPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKI 348 (543)
Q Consensus 270 ~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~ 348 (543)
.+|+||.+++.... ......|-|...+... .+.|. ....+.. .-+.+..-.. . ...
T Consensus 121 q~GT~WYHsH~~~q-~~~Gl~G~lIV~~~~~---~~~p~~~~d~d~~----------i~l~DW~~~~--~-------~~~ 177 (543)
T PLN02991 121 QIGSFYYFPSLGFH-KAAGGFGAIRISSRPL---IPVPFPAPADDYT----------VLIGDWYKTN--H-------KDL 177 (543)
T ss_pred CCcceEEecCcchh-hhCCCeeeEEEeCCcc---cCcccccccceeE----------EEecceecCC--H-------HHH
Confidence 69999999986421 1122344333332211 01111 0000000 0000000000 0 000
Q ss_pred eEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEe
Q 009127 349 SRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQN 428 (543)
Q Consensus 349 ~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N 428 (543)
...+ ... ....-.....|||+.. ...++++.|++++|+|+|
T Consensus 178 ~~~~--~~~-~~~~~~d~~liNG~~~------------------------------------~~~~~v~~G~~yRlRiIN 218 (543)
T PLN02991 178 RAQL--DNG-GKLPLPDGILINGRGS------------------------------------GATLNIEPGKTYRLRISN 218 (543)
T ss_pred HHHh--hcC-CCCCCCCEEEEccCCC------------------------------------CceEEECCCCEEEEEEEe
Confidence 0000 000 0000011355666521 123667899999999999
Q ss_pred CCCC-CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCc-c-ccee
Q 009127 429 WEDT-VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNV-G-MWNI 494 (543)
Q Consensus 429 ~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnp-G-~w~~ 494 (543)
.+.. .+-|+|.||+|+|++.++.. ..|...|++.|.+|+.+-+.++++++ | .|+.
T Consensus 219 a~~~~~~~~~idgH~~tVIa~DG~~-----------~~p~~~~~l~i~~GQRydvlv~a~~~~~~y~i~ 276 (543)
T PLN02991 219 VGLQNSLNFRIQNHTMKLVEVEGTH-----------TIQTPFSSLDVHVGQSYSVLITADQPAKDYYIV 276 (543)
T ss_pred ccCCeeEEEEECCCEEEEEEeCCcc-----------ccceeeeEEEEcCCcEEEEEEECCCCCCcEEEE
Confidence 8765 47999999999999997532 23556799999999999999999874 5 3443
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.3e-08 Score=106.52 Aligned_cols=220 Identities=11% Similarity=0.080 Sum_probs=133.7
Q ss_pred CeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEE-EEcCccccccccCeEEEcCCCeEEEEEEeCC
Q 009127 191 DGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLV-EVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ 269 (543)
Q Consensus 191 ~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~vi-a~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 269 (543)
..+++||+.. .|.++++.|+++++++.|.-.. ...+|.||....-- ..||.+. .+-.|.||+++...|++++
T Consensus 46 ~~~~vNG~~P-GP~I~~~~GD~v~V~v~N~L~~-~ttiHWHGl~~~~~~~~DGv~g-----tQcpI~PG~sftY~F~~~~ 118 (545)
T PLN02168 46 QVIVINDMFP-GPLLNATANDVINVNIFNNLTE-PFLMTWNGLQLRKNSWQDGVRG-----TNCPILPGTNWTYRFQVKD 118 (545)
T ss_pred EEEEECCcCC-CCcEEEECCCEEEEEEEeCCCC-CccEeeCCccCCCCCCcCCCCC-----CcCCCCCCCcEEEEEEeCC
Confidence 4689999974 7999999999999999999875 56677777543222 2588652 2347999999999999965
Q ss_pred CCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcccccce
Q 009127 270 APQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKIS 349 (543)
Q Consensus 270 ~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~ 349 (543)
.+|+||.+++.... ......|.|...+.... +.+.+ .+..+.. + -+....... .. ...
T Consensus 119 q~GT~WYHsH~~~Q-~~~GL~G~lII~~~~~~-~~p~~-~~d~e~~--l--------~l~Dw~~~~-~~--------~~~ 176 (545)
T PLN02168 119 QIGSYFYFPSLLLQ-KAAGGYGAIRIYNPELV-PVPFP-KPDEEYD--I--------LIGDWFYAD-HT--------VMR 176 (545)
T ss_pred CCceEEEecChhhh-hhCcceeEEEEcCCccc-CcCcC-cccceee--E--------EEEecCCCC-HH--------HHH
Confidence 69999999985321 11223344444332210 00111 0100100 0 011000000 00 000
Q ss_pred EEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEeC
Q 009127 350 RTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNW 429 (543)
Q Consensus 350 ~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~ 429 (543)
.. +.... .........|||+... ...++++.|++++|+|.|.
T Consensus 177 ~~--~~~g~-~~~~~d~~liNG~~~~-----------------------------------~~~~~v~~G~~yRlRiiNa 218 (545)
T PLN02168 177 AS--LDNGH-SLPNPDGILFNGRGPE-----------------------------------ETFFAFEPGKTYRLRISNV 218 (545)
T ss_pred hh--hhcCC-CCCCCCEEEEeccCCC-----------------------------------cceEEeCCCCEEEEEEEec
Confidence 00 00000 0000113556665210 1246788999999999998
Q ss_pred CCC-CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC
Q 009127 430 EDT-VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN 488 (543)
Q Consensus 430 ~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn 488 (543)
+.. .+-|+|.||+|+|++.++... .|...|++.|.+|+.+.+.+++++
T Consensus 219 ~~~~~~~~~IdgH~~tVIa~DG~~v-----------~p~~~~~l~i~~GqRydvlv~a~~ 267 (545)
T PLN02168 219 GLKTCLNFRIQDHDMLLVETEGTYV-----------QKRVYSSLDIHVGQSYSVLVTAKT 267 (545)
T ss_pred cCCceEEEEECCcEEEEEEECCeEC-----------CCceeeEEEEcCCceEEEEEEcCC
Confidence 755 589999999999999876422 345569999999999999999974
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.4e-08 Score=104.44 Aligned_cols=235 Identities=11% Similarity=0.113 Sum_probs=140.7
Q ss_pred CeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEE-EEEcCccccccccCeEEEcCCCeEEEEEEeC-
Q 009127 191 DGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKL-VEVEGSHTLQNTYAALDIHLGQTYSVLVTMD- 268 (543)
Q Consensus 191 ~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~v-ia~DG~~~~p~~~~~v~l~pgeR~dv~v~~~- 268 (543)
..++|||+.. .|.|+++.|+++++++.|.-......+|.||..+.- -..||.+. +..-.|.||+.+...++++
T Consensus 28 ~~~~~NG~~P-GP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~----vTQcpI~PG~sf~Y~f~~~~ 102 (538)
T TIGR03390 28 YSVVVNGTSP-GPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPL----ASQWPIPPGHFFDYEIKPEP 102 (538)
T ss_pred EEEEECCcCC-CCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcc----cccCCCCCCCcEEEEEEecC
Confidence 4799999974 799999999999999999865345677888775432 24788763 2233688999999999875
Q ss_pred CCCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcccccc
Q 009127 269 QAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKI 348 (543)
Q Consensus 269 ~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~ 348 (543)
+.+|+||.+++... +.....|.|...+.... +.. .+.+ ...-+....-.. .+ ..
T Consensus 103 ~q~GT~WYHsH~~~--Q~~~l~G~lIV~~~~~~---~~~----~d~e--------~~l~l~Dw~~~~--~~-------~~ 156 (538)
T TIGR03390 103 GDAGSYFYHSHVGF--QAVTAFGPLIVEDCEPP---PYK----YDDE--------RILLVSDFFSAT--DE-------EI 156 (538)
T ss_pred CCCeeeEEecCCch--hhhcceeEEEEccCCcc---CCC----ccCc--------EEEEEeCCCCCC--HH-------HH
Confidence 36899999998632 21224444444432110 100 0100 000011110000 00 00
Q ss_pred eEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEe
Q 009127 349 SRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQN 428 (543)
Q Consensus 349 ~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N 428 (543)
...+. ..............|||+.......... + . ...| ....++++.|++++|+|+|
T Consensus 157 ~~~~~-~~~~~~~~~~d~~liNG~~~~~~~~~~~-------------~-----~--~~~~-~~~~~~v~~G~~yRlRlIN 214 (538)
T TIGR03390 157 EQGLL-STPFTWSGETEAVLLNGKSGNKSFYAQI-------------N-----P--SGSC-MLPVIDVEPGKTYRLRFIG 214 (538)
T ss_pred Hhhhh-ccCCccCCCCceEEECCccccccccccc-------------c-----C--CCCC-cceEEEECCCCEEEEEEEc
Confidence 00000 0000000111247788874321000000 0 0 0001 1346889999999999999
Q ss_pred CCCC-CCCeeecCCC-eEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCc
Q 009127 429 WEDT-VQSYHIDGYS-FFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNV 489 (543)
Q Consensus 429 ~~~~-~HP~HlHG~~-F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnp 489 (543)
.+.. ..-|+|.||+ |+|++.++. +..|...|++.|.+|+.+-|.++++.+
T Consensus 215 a~~~~~~~~~idgH~~~~VIa~DG~-----------~~~P~~v~~l~l~~GqRydVlv~~~~~ 266 (538)
T TIGR03390 215 ATALSLISLGIEDHENLTIIEADGS-----------YTKPAKIDHLQLGGGQRYSVLFKAKTE 266 (538)
T ss_pred cCCceEEEEEECCCCeEEEEEeCCC-----------CCCceEeCeEEEccCCEEEEEEECCCc
Confidence 9765 4789999999 999999764 234667899999999999999999764
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.6e-07 Score=101.84 Aligned_cols=237 Identities=11% Similarity=0.142 Sum_probs=140.3
Q ss_pred CeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEE-EEcCccccccccCeEEEcCCCeEEEEEEeCC
Q 009127 191 DGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLV-EVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ 269 (543)
Q Consensus 191 ~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~vi-a~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 269 (543)
..++|||+.- .|.|+++.|+++++++.|.... ...+|.||..+.-- -.||.. . ..-.|.||+++...|++++
T Consensus 49 ~vi~vNGq~P-GPtI~~~~GD~v~V~V~N~L~~-~ttIHWHGl~q~~t~w~DGv~---~--TQcPI~PG~sftY~F~~~d 121 (596)
T PLN00044 49 EAIGINGQFP-GPALNVTTNWNLVVNVRNALDE-PLLLTWHGVQQRKSAWQDGVG---G--TNCAIPAGWNWTYQFQVKD 121 (596)
T ss_pred EEEEEcCcCC-CCcEEEECCCEEEEEEEeCCCC-CccEEECCccCCCCccccCCC---C--CcCCcCCCCcEEEEEEeCC
Confidence 4799999974 7999999999999999999874 56778888654432 479853 2 3468999999999999965
Q ss_pred CCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCC-CccccccccccccccccCCCCCCCCCCCCCCcccccc
Q 009127 270 APQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPT-TEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKI 348 (543)
Q Consensus 270 ~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~ 348 (543)
.+|+||.+++..... .....|-|...+.... +.+.+. +. .+.. .-+.+..... . ...
T Consensus 122 q~GT~WYHsH~~~Q~-~~Gl~GalII~~~~~~-~~P~~~-~~~~e~~----------i~l~DW~~~~--~-------~~~ 179 (596)
T PLN00044 122 QVGSFFYAPSTALHR-AAGGYGAITINNRDVI-PIPFGF-PDGGDIT----------LFIADWYARD--H-------RAL 179 (596)
T ss_pred CCceeEeeccchhhh-hCcCeeEEEEcCcccc-cccccC-CcccceE----------EEecccccCC--H-------HHH
Confidence 699999999754211 1223343333332210 011110 00 0000 0011000000 0 000
Q ss_pred eEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEe
Q 009127 349 SRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQN 428 (543)
Q Consensus 349 ~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N 428 (543)
.+.+.... .........|||+.-...+...+ . +. .....++++.|++++|+|+|
T Consensus 180 ~~~l~~g~---~~~~~d~~lING~g~~~~n~~~~-----------~-------~~-----~~~~~i~V~~Gk~yRlRiIN 233 (596)
T PLN00044 180 RRALDAGD---LLGAPDGVLINAFGPYQYNDSLV-----------P-------PG-----ITYERINVDPGKTYRFRVHN 233 (596)
T ss_pred HHHHhcCC---CCCCCCceEEcccCccccCCccc-----------c-------CC-----CccceEEECCCCEEEEEEEE
Confidence 00000000 00001124466542100000000 0 00 01236889999999999999
Q ss_pred CCCC-CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCc-c--cce
Q 009127 429 WEDT-VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNV-G--MWN 493 (543)
Q Consensus 429 ~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnp-G--~w~ 493 (543)
.+.. .--|+|-||+|.|++.++. +..|..-|++.|.+|+.+.+.++++.+ | .|+
T Consensus 234 aa~~~~~~fsIdgH~mtVIa~DG~-----------~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i 291 (596)
T PLN00044 234 VGVATSLNFRIQGHNLLLVEAEGS-----------YTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYV 291 (596)
T ss_pred ccCCceEEEEECCCEEEEEEeCCc-----------ccCceeeeeEEEcCCceEEEEEECCCCCCCceEE
Confidence 8754 4679999999999999753 224667799999999999999999875 5 466
|
|
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.5e-08 Score=87.60 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=72.8
Q ss_pred CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccc-----------cccccCeEEEcCCCeEEEEEEeCC
Q 009127 201 NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT-----------LQNTYAALDIHLGQTYSVLVTMDQ 269 (543)
Q Consensus 201 ~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~-----------~p~~~~~v~l~pgeR~dv~v~~~~ 269 (543)
..+.++++.|++++|+|.|.+.. .|+||+||+.|+|++.++... .|...|++.+.+|+++.+.++++
T Consensus 32 ~~~~~~~~~g~~v~~~l~N~~~~-~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~~- 109 (138)
T PF07731_consen 32 NTPVIEVKNGDVVEIVLQNNGSM-PHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRAD- 109 (138)
T ss_dssp TTSEEEEETTSEEEEEEEECTTS-SEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEET-
T ss_pred CcceEEEeCCCEEEEEEECCCCC-ccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEee-
Confidence 46889999999999999998886 899999999999999998874 57789999999999999999998
Q ss_pred CCcceEEEEeec
Q 009127 270 APQDYYIVVSSR 281 (543)
Q Consensus 270 ~~g~y~i~~~~~ 281 (543)
.+|.|.++|+..
T Consensus 110 ~~G~w~~HCHi~ 121 (138)
T PF07731_consen 110 NPGPWLFHCHIL 121 (138)
T ss_dssp STEEEEEEESSH
T ss_pred cceEEEEEEchH
Confidence 899999999875
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=98.79 E-value=3e-07 Score=100.27 Aligned_cols=229 Identities=13% Similarity=0.103 Sum_probs=132.9
Q ss_pred ECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeEEEEEEeCCCc-cc
Q 009127 52 INGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNFTYVLQAKDQI-GS 124 (543)
Q Consensus 52 ~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~~y~f~~~~~~-Gt 124 (543)
+||+.-.++|.|++|++.++|+.|... ....+++.|..+. ..+.||.+. ....|.||||++.-+++.+.+ +.
T Consensus 219 ~n~~~~p~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~t-VIa~DG~~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~ 297 (574)
T PLN02191 219 EGDQCAPQTLRVEPNKTYRIRLASTTALASLNLAVQGHKLV-VVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQN 297 (574)
T ss_pred cCCCCCceEEEEcCCCEEEEEEEecCCceeEEEEECCCeEE-EEEcCCeeccceEeeeEEEcCCCeEEEEEECCCCCCCC
Confidence 444432237999999999999999954 4556777776553 357899874 235699999999999996445 58
Q ss_pred ceecCCchhhh---hccceeEEEEecCCCCCCCC------CCCCC-----ceEE-Eeeeee-eccHHHH-HHH--hccCC
Q 009127 125 YFYFPSFLFHK---AAGAFGGIRIWSRPRIPVPF------PPPAG-----DFTV-LAGDWY-RSNHYVL-RRL--LDSGH 185 (543)
Q Consensus 125 ~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~~~------~~~~~-----e~~l-~~~d~~-~~~~~~~-~~~--~~~g~ 185 (543)
||-+.-...+. ..++ +.|-.+.......+. +..+. +... .+.... ....... ... +....
T Consensus 298 y~ira~~~~~~~~~~~~~-ail~Y~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 376 (574)
T PLN02191 298 YYISVGVRGRKPNTTQAL-TILNYVTAPASKLPSSPPPVTPRWDDFERSKNFSKKIFSAMGSPSPPKKYRKRLILLNTQN 376 (574)
T ss_pred EEEEEEccccCCCCCCce-EEEEECCCCCCCCCCCCCCCCCcccccchhhcccccccccccCCCCCCcccceEEEecccc
Confidence 99886432211 1232 333333322110000 00000 0000 000000 0000000 000 00000
Q ss_pred CCCCCCeEEEcCCCCC---------------------------------------------cceEEEecCCEEEEEEEEc
Q 009127 186 NLPFPDGLLINGRGWN---------------------------------------------GYTFTVEPGRTYRFRISNV 220 (543)
Q Consensus 186 ~~~~~~~~liNG~~~~---------------------------------------------~p~~~v~~G~~~rlRiiN~ 220 (543)
.......+.+||..+. ...+.++.|+.+.+=|.|.
T Consensus 377 ~~~~~~~~~~n~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~Vdivi~n~ 456 (574)
T PLN02191 377 LIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRSYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNA 456 (574)
T ss_pred eeCCeEEEEECcccCcCCCcchHHHHhhccCcccccCCCcccccccccccCCCccccccccceeEEecCCCEEEEEEECC
Confidence 0000113445554320 1123455688899888887
Q ss_pred C-----CcceEEEEEeCCeeEEEEEc-Ccc-----------ccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccC
Q 009127 221 G-----LTTSINFRIQGHSMKLVEVE-GSH-----------TLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFT 283 (543)
Q Consensus 221 ~-----~~~~~~~~i~g~~~~via~D-G~~-----------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~ 283 (543)
. ....|+||+|||+|+|++.. |.+ ..|...|++.+.++.=+-+.++++ +||-|.+||+....
T Consensus 457 ~~~~~~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~~nl~nP~rRDTv~vp~~Gw~vIRf~aD-NPG~Wl~HCHi~~H 535 (574)
T PLN02191 457 NVLKGVVSEIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTD-NPGVWFFHCHIEPH 535 (574)
T ss_pred CcccCCCCCCCCEEeCCCCeEEEEecCCCCCcccCcccccCCCCCcCCeEEeCCCCEEEEEEECC-CCEEEEEecCchhh
Confidence 5 24579999999999999775 322 257789999999999999999998 79999999987644
|
|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.73 E-value=3e-08 Score=85.08 Aligned_cols=90 Identities=17% Similarity=0.153 Sum_probs=67.4
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC-cc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN-VG 490 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn-pG 490 (543)
+++.++.|+.+++.+.|....++.+|+||...-- ..+....+ .. -.-.|.||+..+.+|+++. +|
T Consensus 26 PtI~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~-----~~~~DG~~--------~~-~~~~i~pG~~~~Y~~~~~~~~G 91 (117)
T PF07732_consen 26 PTIRVREGDTVRITVTNNLDEPTSIHWHGLHQPP-----SPWMDGVP--------GV-TQCPIAPGESFTYEFTANQQAG 91 (117)
T ss_dssp EEEEEETTEEEEEEEEEESSSGBSEEEETSBSTT-----GGGGSGGT--------TT-SGSSBSTTEEEEEEEEESSCSE
T ss_pred CEEEEEcCCeeEEEEEeccccccccccceeeeee-----eeecCCcc--------cc-cceeEEeecceeeeEeeecccc
Confidence 3577889999999999998889999999965311 00110000 00 0123778999999999988 99
Q ss_pred cceeeecchhhhhcccEEEEEEecC
Q 009127 491 MWNIRSENWARQYLGQQFYLRVYSP 515 (543)
Q Consensus 491 ~w~~HCHil~Hed~GMm~~~~V~~p 515 (543)
.|.||||...|..+||.+.+.|.++
T Consensus 92 t~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 92 TYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp EEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred ceeEeeCCCchhcCcCEEEEEEcCC
Confidence 9999999999878999999998765
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.6e-07 Score=80.95 Aligned_cols=74 Identities=19% Similarity=0.357 Sum_probs=54.7
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
.+.|++++||+| +++|....++++.+.|.. +...+...+.||++++|.|+. +|+|-|+|- .|...
T Consensus 46 P~~i~v~~Gd~V--~~~N~~~~~H~v~~~~~~--------~~~~~~~~~~pg~t~~~tF~~---~G~y~y~C~--~H~~~ 110 (119)
T PRK02710 46 PSTLTIKAGDTV--KWVNNKLAPHNAVFDGAK--------ELSHKDLAFAPGESWEETFSE---AGTYTYYCE--PHRGA 110 (119)
T ss_pred CCEEEEcCCCEE--EEEECCCCCceEEecCCc--------cccccccccCCCCEEEEEecC---CEEEEEEcC--CCccC
Confidence 479999999985 556876677777665421 111122357899999999964 899999997 56668
Q ss_pred cceeEEEEe
Q 009127 138 GAFGGIRIW 146 (543)
Q Consensus 138 Gl~G~liV~ 146 (543)
||.|.|+|+
T Consensus 111 gM~G~I~V~ 119 (119)
T PRK02710 111 GMVGKITVE 119 (119)
T ss_pred CcEEEEEEC
Confidence 999999984
|
|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.9e-07 Score=78.52 Aligned_cols=70 Identities=16% Similarity=0.234 Sum_probs=46.1
Q ss_pred ceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhcc
Q 009127 59 PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAG 138 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 138 (543)
..|++++|+.|+|+++|.....+.+...++.. ...|.||++.++.|+. +++|+|=|+|-.+. .
T Consensus 35 ~~i~v~~G~~v~l~~~N~~~~~h~~~i~~~~~------------~~~l~~g~~~~~~f~~-~~~G~y~~~C~~~~---~- 97 (104)
T PF13473_consen 35 STITVKAGQPVTLTFTNNDSRPHEFVIPDLGI------------SKVLPPGETATVTFTP-LKPGEYEFYCTMHP---N- 97 (104)
T ss_dssp -EEEEETTCEEEEEEEE-SSS-EEEEEGGGTE------------EEEE-TT-EEEEEEEE--S-EEEEEB-SSS----T-
T ss_pred CEEEEcCCCeEEEEEEECCCCcEEEEECCCce------------EEEECCCCEEEEEEcC-CCCEEEEEEcCCCC---c-
Confidence 59999999999999999988777666666432 2568999999999987 58999999998555 2
Q ss_pred ceeEEEE
Q 009127 139 AFGGIRI 145 (543)
Q Consensus 139 l~G~liV 145 (543)
|.|-|+|
T Consensus 98 m~G~liV 104 (104)
T PF13473_consen 98 MKGTLIV 104 (104)
T ss_dssp TB-----
T ss_pred ceecccC
Confidence 6777765
|
|
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.53 E-value=7e-06 Score=88.30 Aligned_cols=228 Identities=18% Similarity=0.204 Sum_probs=141.9
Q ss_pred CeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCee-EEEEEcCccccccccCeEEEcCCCeEEEEEEeCC
Q 009127 191 DGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSM-KLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ 269 (543)
Q Consensus 191 ~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~-~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 269 (543)
..++|||+-. .|.|.++.|+++.++++|-.. ..+.+|.||-.. .--..||.+ ...=.|.|||.|-..++.++
T Consensus 48 ~vi~iNG~fP-GP~I~~~~gD~ivV~v~N~~~-~~~sihWhGv~q~kn~w~DG~~-----~TqCPI~Pg~~~tY~F~v~~ 120 (563)
T KOG1263|consen 48 QVITINGQFP-GPTINAEEGDTIVVNVVNRLD-EPFSIHWHGVRQRKNPWQDGVY-----ITQCPIQPGENFTYRFTVKD 120 (563)
T ss_pred eeEeecCCCC-CCeEEEEeCCEEEEEEEeCCC-CceEEEeccccccCCccccCCc-----cccCCcCCCCeEEEEEEeCC
Confidence 4789999974 799999999999999999966 467777777633 333459944 24457899999999999997
Q ss_pred CCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCCCcc-----ccccc-cccccccccCCCCCCCCCCCCCCc
Q 009127 270 APQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEI-----AWSLN-QARSIRWNLTASGPRPNPQGSYHY 343 (543)
Q Consensus 270 ~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~-----~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~ 343 (543)
..|+||.+++...... ....|-|........ +-|.+ .|..+. +|..+ ....+...+......+.
T Consensus 121 q~GT~~yh~h~~~~Ra-~G~~G~liI~~~~~~-p~pf~-~pd~E~~ill~dW~~~~~~~~l~~~~~~~~~~p~------- 190 (563)
T KOG1263|consen 121 QIGTLWYHSHVSWQRA-TGVFGALIINPRPGL-PVPFP-KPDKEFTILLGDWYKNLNHKNLKNFLDRTGALPN------- 190 (563)
T ss_pred cceeEEEeeccccccc-cCceeEEEEcCCccC-CCCCC-CCCceeEEEeEeeccccCHHHHHHhhccCCCCCC-------
Confidence 8999999998754322 113443433322110 01111 111110 11110 00011000000000000
Q ss_pred ccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEE
Q 009127 344 GMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVE 423 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ 423 (543)
. .....|||+.. ..+.|...+++..|++..
T Consensus 191 ----------------~---~D~~~iNg~~g-------------------------------~~~~~~~~l~v~pGktY~ 220 (563)
T KOG1263|consen 191 ----------------P---SDGVLINGRSG-------------------------------FLYNCTPTLTVEPGKTYR 220 (563)
T ss_pred ----------------C---CCceEECCCCC-------------------------------cccCceeEEEEcCCCEEE
Confidence 0 11245555541 122346678899999999
Q ss_pred EEEEeCCCC--CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCc-c-cceeeec
Q 009127 424 IVFQNWEDT--VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNV-G-MWNIRSE 497 (543)
Q Consensus 424 ~~i~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnp-G-~w~~HCH 497 (543)
|+|.|.+-. .+ |.|-||.+.||+.++- + ..|..-|++.|-+|++..+..++|.+ + -|+.=|=
T Consensus 221 lRiiN~g~~~~l~-F~I~~H~ltvVe~Dg~-y----------~~p~~~~~l~i~~GQ~~~vLvtadq~~~~Y~i~~~~ 286 (563)
T KOG1263|consen 221 LRIINAGLNTSLN-FSIANHQLTVVEVDGA-Y----------TKPFTTDSLDIHPGQTYSVLLTADQSPGDYYIAASP 286 (563)
T ss_pred EEEEccccccceE-EEECCeEEEEEEecce-E----------EeeeeeceEEEcCCcEEEEEEeCCCCCCcEEEEEEe
Confidence 999998633 34 9999999999999752 1 23556699999999999999999864 4 3555554
|
|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=98.34 E-value=2e-06 Score=71.61 Aligned_cols=84 Identities=17% Similarity=0.270 Sum_probs=56.7
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCC-CCCCCCCC-CCCcCCCCCeEEEEEEeCCCcccceecCCchh
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRN-SWQDGVYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLF 133 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~-~~~DG~p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~ 133 (543)
|-...|+|++||+| +++|.-..++++.++....... ....+... +...+.||+++++.|.. +|+|.|||. .
T Consensus 14 F~P~~i~v~~G~~V--~~~N~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~t~~~tF~~---~G~y~y~C~--~ 86 (99)
T TIGR02656 14 FEPAKISIAAGDTV--EWVNNKGGPHNVVFDEDAVPAGVKELAKSLSHKDLLNSPGESYEVTFST---PGTYTFYCE--P 86 (99)
T ss_pred EeCCEEEECCCCEE--EEEECCCCCceEEECCCCCccchhhhcccccccccccCCCCEEEEEeCC---CEEEEEEcC--C
Confidence 33478999999986 4558766667666654321100 00011111 22457899999998864 899999997 7
Q ss_pred hhhccceeEEEEe
Q 009127 134 HKAAGAFGGIRIW 146 (543)
Q Consensus 134 q~~~Gl~G~liV~ 146 (543)
+...||.|.|+|+
T Consensus 87 H~~aGM~G~I~V~ 99 (99)
T TIGR02656 87 HRGAGMVGKITVE 99 (99)
T ss_pred ccccCCEEEEEEC
Confidence 7788999999985
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.5e-06 Score=74.91 Aligned_cols=93 Identities=18% Similarity=0.233 Sum_probs=78.1
Q ss_pred eeEEecCCCcEEEEEEEeCCCC-CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC-
Q 009127 411 TSVMAANFREFVEIVFQNWEDT-VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN- 488 (543)
Q Consensus 411 ~~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn- 488 (543)
...+.++.|++++|.|.|.+.. .+.|++.||+|.|++.++... .|...|++.|.+|+.+.|.++++.
T Consensus 59 ~~~~~v~~g~~~rlRliNa~~~~~~~~~i~gh~~~Via~DG~~v-----------~p~~~~~l~l~~G~R~dvlv~~~~~ 127 (159)
T PF00394_consen 59 PPVIKVKPGERYRLRLINAGASTSFNFSIDGHPMTVIAADGVPV-----------EPYKVDTLVLAPGQRYDVLVTADQP 127 (159)
T ss_dssp SGEEEEETTTEEEEEEEEESSS-BEEEEETTBCEEEEEETTEEE-----------EEEEESBEEE-TTEEEEEEEEECSC
T ss_pred cceEEEcCCcEEEEEEEeccCCeeEEEEeeccceeEeeeccccc-----------cccccceEEeeCCeEEEEEEEeCCC
Confidence 3467889999999999998764 689999999999999976422 267789999999999999999987
Q ss_pred cccceeee----cchhhhhcccEEEEEEec
Q 009127 489 VGMWNIRS----ENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 489 pG~w~~HC----Hil~Hed~GMm~~~~V~~ 514 (543)
+|.|.++| +...+...|+...+.+.+
T Consensus 128 ~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y~ 157 (159)
T PF00394_consen 128 PGNYWIRASYQHDSINDPQNGNALAILRYD 157 (159)
T ss_dssp SSEEEEEEEESSSSSHSHGGGTTEEEEEET
T ss_pred CCeEEEEEecccCCCccCCCcEEEEEEEEC
Confidence 99999999 667788889888887764
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.4e-05 Score=71.30 Aligned_cols=90 Identities=10% Similarity=-0.004 Sum_probs=58.7
Q ss_pred eEEecCCCcEEEEEEEeCCC-CCCCeeecCCCeEEEeecCCCCCCC-CCCCCCCCCCCcceeEEeCC---C--CEEEEEE
Q 009127 412 SVMAANFREFVEIVFQNWED-TVQSYHIDGYSFFVVGMDGGQWTPA-SRTRYNLRDTVARSTTQVYP---R--SWTAIYM 484 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~-~~~~~~~~~p~~rDTv~vp~---~--g~v~irf 484 (543)
+.+.++.|++|++++.|.+. ..|.|-||.+.- .+... .... .+.......+|+ + ++..+.|
T Consensus 52 P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~--------~~~~~p~mdG----~~~~~~~~i~p~~~~g~~~~~~~tf 119 (148)
T TIGR03095 52 PTIVIPEGVTVHFTVINTDTDSGHNFDISKRGP--------PYPYMPGMDG----LGFVAGTGFLPPPKSGKFGYTDFTY 119 (148)
T ss_pred CEEEEcCCCEEEEEEEeCCCCccccEEeecCCC--------ccccccccCC----CCccccCcccCCCCCCccceeEEEE
Confidence 34778999999999999865 567766664321 11000 0000 011112222222 2 2467888
Q ss_pred EecCcccceeeecchhhhhcccEEEEEEe
Q 009127 485 ALDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 485 ~adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
+++.+|.+.||||+..|...||.+.+.|.
T Consensus 120 ~f~~aGtywyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 120 HFSTAGTYWYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred ECCCCeEEEEEcCChhHHHCCCEEEEEEC
Confidence 88999999999999999999999999873
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=98.00 E-value=9e-06 Score=67.67 Aligned_cols=79 Identities=22% Similarity=0.371 Sum_probs=53.9
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCC------CC-CCCcCCCCCeEEEEEEeCCCcccceec
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGV------YG-TTCPIPPGKNFTYVLQAKDQIGSYFYF 128 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~------p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH 128 (543)
|-.+.|++++||+|+ +.|....++++.+=-- ....|. +. ....+.||+++++.|+ ++|+|.|+
T Consensus 14 F~P~~i~V~~G~tV~--~~n~~~~~Hnv~~~~~-----~~~~~~~~~~~~~~~~~~~~~~G~~~~~tF~---~~G~y~y~ 83 (99)
T PF00127_consen 14 FDPSEITVKAGDTVT--FVNNDSMPHNVVFVAD-----GMPAGADSDYVPPGDSSPLLAPGETYSVTFT---KPGTYEYY 83 (99)
T ss_dssp EESSEEEEETTEEEE--EEEESSSSBEEEEETT-----SSHTTGGHCHHSTTCEEEEBSTTEEEEEEEE---SSEEEEEE
T ss_pred EeCCEEEECCCCEEE--EEECCCCCceEEEecc-----cccccccccccCccccceecCCCCEEEEEeC---CCeEEEEE
Confidence 334799999999865 5665555555544210 000110 00 1134789999999997 59999999
Q ss_pred CCchhhhhccceeEEEEe
Q 009127 129 PSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 129 ~H~~~q~~~Gl~G~liV~ 146 (543)
|- . |...||.|.|+|+
T Consensus 84 C~-P-H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 84 CT-P-HYEAGMVGTIIVE 99 (99)
T ss_dssp ET-T-TGGTTSEEEEEEE
T ss_pred cC-C-CcccCCEEEEEEC
Confidence 98 5 8888999999995
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.6e-05 Score=83.74 Aligned_cols=98 Identities=18% Similarity=0.255 Sum_probs=69.0
Q ss_pred EecCCCeeE--EEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEE
Q 009127 39 DIYPLGVKQ--QGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVL 116 (543)
Q Consensus 39 ~~~~~g~~~--~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f 116 (543)
.+..+|.+. .+.+..-+|--..|+|++||+|+++++|.-...=.+ ||+.+.+. |+ ...+.||++.+..|
T Consensus 533 ~v~R~G~kv~Vym~a~a~~f~p~~i~Vk~GDeVt~~lTN~d~~~DVi--HGF~Ip~~----nI---~~dv~PG~t~svtF 603 (635)
T PRK02888 533 KVIRDGNKVRVYMTSQAPAFGLREFTVKQGDEVTVIVTNLDKVEDLT--HGFAIPNY----GV---NMEVAPQATASVTF 603 (635)
T ss_pred ceEEeCCEEEEEEEEEecccCCceEEecCCCEEEEEEEeCCcccccc--cceeeccc----Cc---cEEEcCCceEEEEE
Confidence 355677554 445566677556899999999999999953211111 55543211 11 24578999999999
Q ss_pred EeCCCcccceecCCc---hhhhhccceeEEEEecC
Q 009127 117 QAKDQIGSYFYFPSF---LFHKAAGAFGGIRIWSR 148 (543)
Q Consensus 117 ~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~ 148 (543)
++ +++|+|||||.. ..| .+|.|.++|+++
T Consensus 604 ~a-dkPGvy~~~CtefCGa~H--~~M~G~~iVep~ 635 (635)
T PRK02888 604 TA-DKPGVYWYYCTWFCHALH--MEMRGRMLVEPK 635 (635)
T ss_pred Ec-CCCEEEEEECCcccccCc--ccceEEEEEEeC
Confidence 99 589999999984 234 389999999873
|
|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=97.88 E-value=7.5e-05 Score=59.91 Aligned_cols=73 Identities=12% Similarity=0.099 Sum_probs=51.0
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCCcCCCCCeEEEEEEeCCCcccceecCCchhhhh
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKA 136 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~ 136 (543)
.+.|++++||+|. ++|.....+++++.... ++... ....+.||+++++.| +++|+|-|||-.+.
T Consensus 10 P~~i~v~~GdtVt--~~N~d~~~Hnv~~~~g~-------~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~Hp--- 74 (83)
T TIGR02657 10 TPELHVKVGDTVT--WINREAMPHNVHFVAGV-------LGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPHP--- 74 (83)
T ss_pred CCEEEECCCCEEE--EEECCCCCccEEecCCC-------CccccccccccCCCCEEEEEC---CCCEEEEEEcCCCC---
Confidence 4789999999975 57887777787765421 11110 112357888888777 36999999997543
Q ss_pred ccceeEEEEe
Q 009127 137 AGAFGGIRIW 146 (543)
Q Consensus 137 ~Gl~G~liV~ 146 (543)
+|.|.++|+
T Consensus 75 -~M~G~v~V~ 83 (83)
T TIGR02657 75 -FMRGKVVVE 83 (83)
T ss_pred -CCeEEEEEC
Confidence 499999985
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00034 Score=64.10 Aligned_cols=100 Identities=22% Similarity=0.205 Sum_probs=71.9
Q ss_pred EEEECCcCCC-ceEEEecCCEEEEEEEECCCCCceeec--CcccC--CCCCCCCCCC----C------CCCcCCCCCeEE
Q 009127 49 GILINGQFPG-PQIDAVTNDNLIISVYNYLREPFLISW--NGLQQ--RRNSWQDGVY----G------TTCPIPPGKNFT 113 (543)
Q Consensus 49 ~~~~Ng~~pg-P~i~v~~Gd~v~i~~~N~l~~~~~iH~--HG~~~--~~~~~~DG~p----~------tq~~i~PG~~~~ 113 (543)
.+-|||..-| ++|.+-.|-+|.|+++|.-..++++-. -+..+ ......||.. | +...|.+|++..
T Consensus 75 ~~nfnGts~G~m~i~VPAGw~V~i~f~N~~~l~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s~~ 154 (196)
T PF06525_consen 75 PFNFNGTSNGQMTIYVPAGWNVQITFTNQESLPHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQSAS 154 (196)
T ss_pred ceeeecccCCcEEEEEcCCCEEEEEEEcCCCCCeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCceee
Confidence 5678887654 799999999999999998544433221 11111 1223455521 2 123688999998
Q ss_pred EEEEeCCCcccceecCCchhhhhccceeEEEEecCC
Q 009127 114 YVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRP 149 (543)
Q Consensus 114 y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 149 (543)
-.|... ++|+|||-|-...|...||++-|+|.+.-
T Consensus 155 ~~~~~l-~aG~YwlvC~ipGHA~sGMw~~LiVs~~v 189 (196)
T PF06525_consen 155 GVYNDL-PAGYYWLVCGIPGHAESGMWGVLIVSSNV 189 (196)
T ss_pred EEEccC-CCceEEEEccCCChhhcCCEEEEEEecCc
Confidence 778653 69999999999999999999999999754
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0002 Score=59.55 Aligned_cols=83 Identities=13% Similarity=0.046 Sum_probs=58.4
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
..+.++.|++|+|+ |.+...|-+.++...+..-. . ........+++.+.||+...+.|.. ||.
T Consensus 17 ~~i~v~~G~~V~~~--N~~~~~H~~~~~~~~~~~~~-----~--------~~~~~~~~~~~~~~pG~t~~~tF~~--~G~ 79 (99)
T TIGR02656 17 AKISIAAGDTVEWV--NNKGGPHNVVFDEDAVPAGV-----K--------ELAKSLSHKDLLNSPGESYEVTFST--PGT 79 (99)
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEECCCCCccch-----h--------hhcccccccccccCCCCEEEEEeCC--CEE
Confidence 35788999999887 66667888877543221100 0 0001123467888899998886654 999
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.|||- -|..+||.+.+.|.
T Consensus 80 y~y~C~--~H~~aGM~G~I~V~ 99 (99)
T TIGR02656 80 YTFYCE--PHRGAGMVGKITVE 99 (99)
T ss_pred EEEEcC--CccccCCEEEEEEC
Confidence 999998 69999999999873
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00056 Score=61.33 Aligned_cols=96 Identities=20% Similarity=0.184 Sum_probs=71.1
Q ss_pred EEECCcCCC-ceEEEecCCEEEEEEEECCCCCceeecCcccCCC-------CCCCCCCC----C-CC-----CcCCCCCe
Q 009127 50 ILINGQFPG-PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRR-------NSWQDGVY----G-TT-----CPIPPGKN 111 (543)
Q Consensus 50 ~~~Ng~~pg-P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~-------~~~~DG~p----~-tq-----~~i~PG~~ 111 (543)
+-|||+..| |+|-+..|-+|.|+++|.-..++++-. -+.+ ....||.. | ++ ..|.+|++
T Consensus 75 fNfnGts~G~mtIyiPaGw~V~V~f~N~e~~pHnl~i---v~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~Gqs 151 (195)
T TIGR03094 75 FNFNGTSYGAMTIYLPAGWNVYVTFTNYESLPHNLKL---LPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSGHS 151 (195)
T ss_pred ccccCccCCceEEEEeCCCEEEEEEEcCCCCCccEEE---ecCCCCCCCccccccCceeEeecccccCccccccccccce
Confidence 567887765 799999999999999999665554433 1111 12356643 3 21 33678888
Q ss_pred EEEEEEeCCCcccceecCCchhhhhccceeEEEEecCC
Q 009127 112 FTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRP 149 (543)
Q Consensus 112 ~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 149 (543)
..-.|+.. ++|+|||-|-...|..+||+|-+||...-
T Consensus 152 ~sg~~~~~-~~G~YwlvCgipGHAesGMw~~lIVSs~v 188 (195)
T TIGR03094 152 RSGWWNDT-SAGKYWLVCGITGHAESGMWAVVIVSSNV 188 (195)
T ss_pred eEEEeccC-CCeeEEEEcccCChhhcCcEEEEEEecCc
Confidence 66666654 79999999999999999999999999754
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00039 Score=59.82 Aligned_cols=75 Identities=19% Similarity=0.184 Sum_probs=52.9
Q ss_pred ceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhcc
Q 009127 59 PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAG 138 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 138 (543)
-.|+|++||+ |++.|.-...++++.-+.. ..+|.- ...-.+|+++++.|. ++|+|-|+|- -|..+|
T Consensus 54 A~v~v~pGDT--Vtw~~~d~~~Hnv~~~~~~-----~~~g~~--~~~~~~~~s~~~Tfe---~~G~Y~Y~C~--PH~~~g 119 (128)
T COG3794 54 AEVTVKPGDT--VTWVNTDSVGHNVTAVGGM-----DPEGSG--TLKAGINESFTHTFE---TPGEYTYYCT--PHPGMG 119 (128)
T ss_pred cEEEECCCCE--EEEEECCCCCceEEEeCCC-----Cccccc--ccccCCCcceEEEec---ccceEEEEec--cCCCCC
Confidence 4899999999 5677887667777665542 112221 233455677777774 5999999995 456779
Q ss_pred ceeEEEEec
Q 009127 139 AFGGIRIWS 147 (543)
Q Consensus 139 l~G~liV~~ 147 (543)
|.|.|+|++
T Consensus 120 M~G~IvV~~ 128 (128)
T COG3794 120 MKGKIVVGE 128 (128)
T ss_pred cEEEEEeCC
Confidence 999999974
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00036 Score=59.43 Aligned_cols=76 Identities=16% Similarity=0.162 Sum_probs=51.2
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeec-CcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhh
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISW-NGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKA 136 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~-HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~ 136 (543)
...|+|++||+|+....|. ++++.+ .+. .-+|.. ...-.+|+++++.| +++|+|=|+|- .|..
T Consensus 14 P~~v~V~~GdTV~f~n~d~---~Hnv~~~~~~------~p~g~~--~~~s~~g~~~~~tF---~~~G~Y~Y~C~--pH~~ 77 (116)
T TIGR02375 14 PAYIRAAPGDTVTFVPTDK---GHNVETIKGM------IPEGAE--AFKSKINEEYTVTV---TEEGVYGVKCT--PHYG 77 (116)
T ss_pred CCEEEECCCCEEEEEECCC---CeeEEEccCC------CcCCcc--cccCCCCCEEEEEe---CCCEEEEEEcC--CCcc
Confidence 4689999999987776664 344443 221 012221 12224577766666 36999999997 6778
Q ss_pred ccceeEEEEecCC
Q 009127 137 AGAFGGIRIWSRP 149 (543)
Q Consensus 137 ~Gl~G~liV~~~~ 149 (543)
.||.|.|+|.+++
T Consensus 78 ~GM~G~V~Vg~~~ 90 (116)
T TIGR02375 78 MGMVALIQVGDPP 90 (116)
T ss_pred CCCEEEEEECCCC
Confidence 8999999999853
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00092 Score=57.98 Aligned_cols=59 Identities=15% Similarity=0.242 Sum_probs=49.8
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|+.|+|++.|.+..+|.|-++++. -...+++++..+|+|.++.||.|
T Consensus 62 ~I~VkaGD~Vtl~vtN~d~~~H~f~i~~~g---------------------------is~~I~pGet~TitF~adKpG~Y 114 (135)
T TIGR03096 62 ALVVKKGTPVKVTVENKSPISEGFSIDAYG---------------------------ISEVIKAGETKTISFKADKAGAF 114 (135)
T ss_pred EEEECCCCEEEEEEEeCCCCccceEECCCC---------------------------cceEECCCCeEEEEEECCCCEEE
Confidence 477899999999999998888887776541 13456789999999999999999
Q ss_pred eeeecc
Q 009127 493 NIRSEN 498 (543)
Q Consensus 493 ~~HCHi 498 (543)
.|||-.
T Consensus 115 ~y~C~~ 120 (135)
T TIGR03096 115 TIWCQL 120 (135)
T ss_pred EEeCCC
Confidence 999987
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0022 Score=54.52 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=50.6
Q ss_pred CCCceEEEecCCEEEEEEEECC-CCCceeecCcccCCCCCCCCCCCCC-CCcCCCCCeEEEEEEeCCCcccceecCCchh
Q 009127 56 FPGPQIDAVTNDNLIISVYNYL-REPFLISWNGLQQRRNSWQDGVYGT-TCPIPPGKNFTYVLQAKDQIGSYFYFPSFLF 133 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~~~DG~p~t-q~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~ 133 (543)
|-...|+|++||+|+ ++|+. ..++++..-+ ++.+.+ .....||++|+|.|. ++|+|-|+|- .
T Consensus 39 F~P~~ltV~~GdTVt--w~~~~d~~~HnV~s~~---------~~~f~s~~~~~~~G~t~s~Tf~---~~G~Y~Y~C~--p 102 (115)
T TIGR03102 39 FDPPAIRVDPGTTVV--WEWTGEGGGHNVVSDG---------DGDLDESERVSEEGTTYEHTFE---EPGIYLYVCV--P 102 (115)
T ss_pred EeCCEEEECCCCEEE--EEECCCCCCEEEEECC---------CCCccccccccCCCCEEEEEec---CCcEEEEEcc--C
Confidence 334689999999966 66543 3555554311 111111 123578999999994 6999999996 4
Q ss_pred hhhccceeEEEEe
Q 009127 134 HKAAGAFGGIRIW 146 (543)
Q Consensus 134 q~~~Gl~G~liV~ 146 (543)
|...||.|.|+|+
T Consensus 103 H~~~gM~G~I~V~ 115 (115)
T TIGR03102 103 HEALGMKGAVVVE 115 (115)
T ss_pred CCCCCCEEEEEEC
Confidence 5666999999985
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0041 Score=52.13 Aligned_cols=67 Identities=10% Similarity=0.112 Sum_probs=44.2
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|+.+.+++.|.+...|-|.+-+. + -...+++|+..++.|.++.||.|
T Consensus 36 ~i~v~~G~~v~l~~~N~~~~~h~~~i~~~--------------------------~-~~~~l~~g~~~~~~f~~~~~G~y 88 (104)
T PF13473_consen 36 TITVKAGQPVTLTFTNNDSRPHEFVIPDL--------------------------G-ISKVLPPGETATVTFTPLKPGEY 88 (104)
T ss_dssp EEEEETTCEEEEEEEE-SSS-EEEEEGGG--------------------------T-EEEEE-TT-EEEEEEEE-S-EEE
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEECCC--------------------------c-eEEEECCCCEEEEEEcCCCCEEE
Confidence 47789999999999999877766655441 1 23778889999999999999999
Q ss_pred eeeecchhhhhcccEEEE
Q 009127 493 NIRSENWARQYLGQQFYL 510 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~ 510 (543)
-|||-+ |.+ |-+.+
T Consensus 89 ~~~C~~--~~~--m~G~l 102 (104)
T PF13473_consen 89 EFYCTM--HPN--MKGTL 102 (104)
T ss_dssp EEB-SS--S-T--TB---
T ss_pred EEEcCC--CCc--ceecc
Confidence 999997 554 44444
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.016 Score=48.04 Aligned_cols=82 Identities=10% Similarity=0.016 Sum_probs=55.1
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCC-CCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPA-SRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVG 490 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~-~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG 490 (543)
..+.++.|++|.|+.. +...|.+.+=- +.+... +.... +..-.+..+.+|....+.|. .+|
T Consensus 17 ~~i~V~~G~tV~~~n~--~~~~Hnv~~~~----------~~~~~~~~~~~~----~~~~~~~~~~~G~~~~~tF~--~~G 78 (99)
T PF00127_consen 17 SEITVKAGDTVTFVNN--DSMPHNVVFVA----------DGMPAGADSDYV----PPGDSSPLLAPGETYSVTFT--KPG 78 (99)
T ss_dssp SEEEEETTEEEEEEEE--SSSSBEEEEET----------TSSHTTGGHCHH----STTCEEEEBSTTEEEEEEEE--SSE
T ss_pred CEEEECCCCEEEEEEC--CCCCceEEEec----------cccccccccccc----CccccceecCCCCEEEEEeC--CCe
Confidence 3578899999988766 45677766422 111000 00000 11115677888888777776 999
Q ss_pred cceeeecchhhhhcccEEEEEEe
Q 009127 491 MWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 491 ~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|.|+|- - |...||-+.+.|.
T Consensus 79 ~y~y~C~-P-H~~~GM~G~i~V~ 99 (99)
T PF00127_consen 79 TYEYYCT-P-HYEAGMVGTIIVE 99 (99)
T ss_dssp EEEEEET-T-TGGTTSEEEEEEE
T ss_pred EEEEEcC-C-CcccCCEEEEEEC
Confidence 9999999 4 9999999999884
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.022 Score=48.99 Aligned_cols=72 Identities=14% Similarity=0.071 Sum_probs=50.6
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|+|+ |.+...|.+.+.+.. .+ ......+.+|+...+.|.. ||.|
T Consensus 48 ~i~v~~Gd~V~~~--N~~~~~H~v~~~~~~---------~~--------------~~~~~~~~pg~t~~~tF~~--~G~y 100 (119)
T PRK02710 48 TLTIKAGDTVKWV--NNKLAPHNAVFDGAK---------EL--------------SHKDLAFAPGESWEETFSE--AGTY 100 (119)
T ss_pred EEEEcCCCEEEEE--ECCCCCceEEecCCc---------cc--------------cccccccCCCCEEEEEecC--CEEE
Confidence 3678899998875 666678887654211 00 0112346678887766654 9999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|+|= -|...||-+.+.|+
T Consensus 101 ~y~C~--~H~~~gM~G~I~V~ 119 (119)
T PRK02710 101 TYYCE--PHRGAGMVGKITVE 119 (119)
T ss_pred EEEcC--CCccCCcEEEEEEC
Confidence 99998 59999999999883
|
|
| >PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.061 Score=55.20 Aligned_cols=78 Identities=14% Similarity=0.069 Sum_probs=54.1
Q ss_pred cCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC--CCCCcCCCCCeEEEEEEeCCCcccceecCCch
Q 009127 55 QFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY--GTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL 132 (543)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p--~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (543)
++--..+.|+.|+ +.+.|+|....++.+-. .+|+. +....|.||.+..+.+++ ++|+|-|+| +
T Consensus 40 ~c~p~~~tVpAG~-~~f~V~N~~~~~~Efe~----------~~~~~vv~e~EnIaPG~s~~l~~~L--~pGtY~~~C--~ 104 (375)
T PRK10378 40 QCEPMTLTVNAGK-TQFIIQNHSQKALEWEI----------LKGVMVVEERENIAPGFSQKMTANL--QPGEYDMTC--G 104 (375)
T ss_pred ccccCceeeCCCC-EEEEEEeCCCCcceEEe----------eccccccccccccCCCCceEEEEec--CCceEEeec--C
Confidence 3434689999996 89999999765533211 01221 123578999999988877 499999999 3
Q ss_pred hhhhccceeEEEEecCC
Q 009127 133 FHKAAGAFGGIRIWSRP 149 (543)
Q Consensus 133 ~q~~~Gl~G~liV~~~~ 149 (543)
.+ ..+.|.|+|.+..
T Consensus 105 ~~--~~~~g~l~Vtg~~ 119 (375)
T PRK10378 105 LL--TNPKGKLIVKGEA 119 (375)
T ss_pred cC--CCCCceEEEeCCC
Confidence 32 3358999998753
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.024 Score=61.50 Aligned_cols=75 Identities=13% Similarity=0.232 Sum_probs=56.6
Q ss_pred eEEecCCCcEEEEEEEeCC---CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC
Q 009127 412 SVMAANFREFVEIVFQNWE---DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN 488 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn 488 (543)
..+.++.|+.|.+++.|.+ +..|-|-|-++.. -..+.|+....+.|+++.
T Consensus 555 ~~i~Vk~GDeVt~~lTN~d~~~DViHGF~Ip~~nI---------------------------~~dv~PG~t~svtF~adk 607 (635)
T PRK02888 555 REFTVKQGDEVTVIVTNLDKVEDLTHGFAIPNYGV---------------------------NMEVAPQATASVTFTADK 607 (635)
T ss_pred ceEEecCCCEEEEEEEeCCcccccccceeecccCc---------------------------cEEEcCCceEEEEEEcCC
Confidence 3477899999999999974 4567777643321 124557899999999999
Q ss_pred cccceeeecchhhh-hcccEEEEEEe
Q 009127 489 VGMWNIRSENWARQ-YLGQQFYLRVY 513 (543)
Q Consensus 489 pG~w~~HCHil~He-d~GMm~~~~V~ 513 (543)
||.|.+||...-|. |.+|...+.|+
T Consensus 608 PGvy~~~CtefCGa~H~~M~G~~iVe 633 (635)
T PRK02888 608 PGVYWYYCTWFCHALHMEMRGRMLVE 633 (635)
T ss_pred CEEEEEECCcccccCcccceEEEEEE
Confidence 99999999885443 45888888875
|
|
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.12 Score=47.75 Aligned_cols=89 Identities=19% Similarity=0.208 Sum_probs=62.9
Q ss_pred CeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCC-----eeEEEEEcCcccc-----ccccCeEEEcCCCe
Q 009127 191 DGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGH-----SMKLVEVEGSHTL-----QNTYAALDIHLGQT 260 (543)
Q Consensus 191 ~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~-----~~~via~DG~~~~-----p~~~~~v~l~pgeR 260 (543)
+.+-+||.......+-+..|-++.++++|.+.. .|.|-+--- ..-.+..||.-+. +-....-=|.+||+
T Consensus 74 ~~~nfnGts~G~m~i~VPAGw~V~i~f~N~~~l-~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s 152 (196)
T PF06525_consen 74 NPFNFNGTSNGQMTIYVPAGWNVQITFTNQESL-PHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQS 152 (196)
T ss_pred CceeeecccCCcEEEEEcCCCEEEEEEEcCCCC-CeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCce
Confidence 478899987657899999999999999999875 677766322 1235667775541 11112224569999
Q ss_pred EEEEEEeCCCCcceEEEEeec
Q 009127 261 YSVLVTMDQAPQDYYIVVSSR 281 (543)
Q Consensus 261 ~dv~v~~~~~~g~y~i~~~~~ 281 (543)
+...+... ++|.||+.|.-.
T Consensus 153 ~~~~~~~l-~aG~YwlvC~ip 172 (196)
T PF06525_consen 153 ASGVYNDL-PAGYYWLVCGIP 172 (196)
T ss_pred eeEEEccC-CCceEEEEccCC
Confidence 99777544 699999998653
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.18 Score=44.59 Aligned_cols=89 Identities=17% Similarity=0.168 Sum_probs=65.5
Q ss_pred cCCCceEEEecCCEEEEEEEECCC--CCcee---------ecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcc
Q 009127 55 QFPGPQIDAVTNDNLIISVYNYLR--EPFLI---------SWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIG 123 (543)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~~~N~l~--~~~~i---------H~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~G 123 (543)
.+++-.+.++.|++++..++|.-. ...++ -.|.... +.+++--.....+.||++-+..|..+ ++|
T Consensus 59 ~f~p~~~~v~aG~tv~~v~~n~~el~hef~~~~~~~~~~~~~~~~~~---~Dme~d~~~~v~L~PG~s~elvv~ft-~~g 134 (158)
T COG4454 59 SFKPSSFEVKAGETVRFVLKNEGELKHEFTMDAPDKNLEHVTHMILA---DDMEHDDPNTVTLAPGKSGELVVVFT-GAG 134 (158)
T ss_pred ccCCCcccccCCcEEeeeecCcccceEEEeccCccccchhHHHhhhC---CccccCCcceeEeCCCCcEEEEEEec-CCc
Confidence 457778999999999999999743 11111 1123221 13333222336699999999999995 799
Q ss_pred cceecCCchhhhhccceeEEEEec
Q 009127 124 SYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 124 t~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
.|=+-|-..+++..||.|-|.|.+
T Consensus 135 ~ye~~C~iPGHy~AGM~g~itV~p 158 (158)
T COG4454 135 KYEFACNIPGHYEAGMVGEITVSP 158 (158)
T ss_pred cEEEEecCCCcccCCcEEEEEeCC
Confidence 999999999999999999999864
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.1 Score=44.49 Aligned_cols=75 Identities=13% Similarity=0.145 Sum_probs=48.3
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|.|+..+. .|- |....... +.+. +.+.-.++.. +.++++.+|.+
T Consensus 16 ~v~V~~GdTV~f~n~d~---~Hn---------v~~~~~~~--p~g~-----------~~~~s~~g~~--~~~tF~~~G~Y 68 (116)
T TIGR02375 16 YIRAAPGDTVTFVPTDK---GHN---------VETIKGMI--PEGA-----------EAFKSKINEE--YTVTVTEEGVY 68 (116)
T ss_pred EEEECCCCEEEEEECCC---Cee---------EEEccCCC--cCCc-----------ccccCCCCCE--EEEEeCCCEEE
Confidence 47789999999999875 232 22211100 0110 0111123454 44555789999
Q ss_pred eeeecchhhhhcccEEEEEEecCC
Q 009127 493 NIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
-|+|=. |..+||-+.+.|.+|.
T Consensus 69 ~Y~C~p--H~~~GM~G~V~Vg~~~ 90 (116)
T TIGR02375 69 GVKCTP--HYGMGMVALIQVGDPP 90 (116)
T ss_pred EEEcCC--CccCCCEEEEEECCCC
Confidence 999995 9999999999998863
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.074 Score=46.92 Aligned_cols=93 Identities=12% Similarity=0.071 Sum_probs=66.3
Q ss_pred EecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccce
Q 009127 414 MAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWN 493 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~ 493 (543)
+.++.|++++.++.|..+.-|=|=+= ++....+ .+.-. ....-..---..++.+.||.+..|-+.+.++|.+-
T Consensus 65 ~~v~aG~tv~~v~~n~~el~hef~~~---~~~~~~~--~~~~~--~~~~Dme~d~~~~v~L~PG~s~elvv~ft~~g~ye 137 (158)
T COG4454 65 FEVKAGETVRFVLKNEGELKHEFTMD---APDKNLE--HVTHM--ILADDMEHDDPNTVTLAPGKSGELVVVFTGAGKYE 137 (158)
T ss_pred ccccCCcEEeeeecCcccceEEEecc---Cccccch--hHHHh--hhCCccccCCcceeEeCCCCcEEEEEEecCCccEE
Confidence 45788999999999998877766553 2221111 01000 00000001234689999999999999999999999
Q ss_pred eeecchhhhhcccEEEEEEe
Q 009127 494 IRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 494 ~HCHil~Hed~GMm~~~~V~ 513 (543)
|-|=|-.|-+.||-..++|.
T Consensus 138 ~~C~iPGHy~AGM~g~itV~ 157 (158)
T COG4454 138 FACNIPGHYEAGMVGEITVS 157 (158)
T ss_pred EEecCCCcccCCcEEEEEeC
Confidence 99999999999999999884
|
|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.16 Score=40.50 Aligned_cols=72 Identities=10% Similarity=0.064 Sum_probs=46.4
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|++|.| .|.+...|-.+.+...+ +.. .+.. ..+.++.... ++++.||.|
T Consensus 12 ~i~v~~GdtVt~--~N~d~~~Hnv~~~~g~~-------~~~-------------~~~~-~~~~~g~~~~--~tf~~~G~y 66 (83)
T TIGR02657 12 ELHVKVGDTVTW--INREAMPHNVHFVAGVL-------GEA-------------ALKG-PMMKKEQAYS--LTFTEAGTY 66 (83)
T ss_pred EEEECCCCEEEE--EECCCCCccEEecCCCC-------ccc-------------cccc-cccCCCCEEE--EECCCCEEE
Confidence 467889999987 57777788888653211 000 0111 1234555444 566889999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|||=+ |. .|-+.+.|.
T Consensus 67 ~y~C~~--Hp--~M~G~v~V~ 83 (83)
T TIGR02657 67 DYHCTP--HP--FMRGKVVVE 83 (83)
T ss_pred EEEcCC--CC--CCeEEEEEC
Confidence 999998 65 588888773
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.15 Score=43.78 Aligned_cols=74 Identities=9% Similarity=0.006 Sum_probs=49.5
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCc-hhhhh
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSF-LFHKA 136 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~-~~q~~ 136 (543)
.+.|.+..|++|++.+++. +--+++...++.. +..+.||+.....|++ +++|+|++.|.- -..-.
T Consensus 45 ~~~l~lp~g~~v~~~ltS~-DViHsf~ip~~~~------------k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~gH 110 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSE-DVIHSFWIPELGI------------KMDAIPGRTNSVTFTP-DKPGTYYGQCAEYCGAGH 110 (120)
T ss_dssp SSEEEEETTSEEEEEEEES-SS-EEEEETTCTE------------EEEEBTTCEEEEEEEE-SSSEEEEEEE-SSSSTTG
T ss_pred cceecccccceEeEEEEcC-CccccccccccCc------------ccccccccceeeeeee-ccCCcEEEcCccccCcCc
Confidence 4789999999999999995 3333443333321 2446799999999999 589999999982 12222
Q ss_pred ccceeEEEE
Q 009127 137 AGAFGGIRI 145 (543)
Q Consensus 137 ~Gl~G~liV 145 (543)
.-|.|-++|
T Consensus 111 ~~M~~~v~V 119 (120)
T PF00116_consen 111 SFMPGKVIV 119 (120)
T ss_dssp GG-EEEEEE
T ss_pred CCCeEEEEE
Confidence 236666654
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.24 Score=42.33 Aligned_cols=87 Identities=18% Similarity=0.180 Sum_probs=54.7
Q ss_pred CCceEEEec-CCEEEEEEEECCCCCceeecC--------------------cccCCCCCCCC-CCCCCCCcCCCCCeEEE
Q 009127 57 PGPQIDAVT-NDNLIISVYNYLREPFLISWN--------------------GLQQRRNSWQD-GVYGTTCPIPPGKNFTY 114 (543)
Q Consensus 57 pgP~i~v~~-Gd~v~i~~~N~l~~~~~iH~H--------------------G~~~~~~~~~D-G~p~tq~~i~PG~~~~y 114 (543)
-=..|.|+. |.+|.|+|+|.-..+...--| |+...-.+..| -+.....-|.|||+.+.
T Consensus 14 d~~~i~V~a~~k~vtv~l~h~G~lpk~~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~sv 93 (125)
T TIGR02695 14 NTKSISVPKSCKEFTVNLKHTGKLPKAVMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKTSV 93 (125)
T ss_pred cccEEEEcCCCcEEEEEEecCCcCchhccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceEEE
Confidence 345899998 478999999984322111111 11111111111 11112245899999999
Q ss_pred EEEeCC-Cccc-ceecCCchhhhhccceeEEE
Q 009127 115 VLQAKD-QIGS-YFYFPSFLFHKAAGAFGGIR 144 (543)
Q Consensus 115 ~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~li 144 (543)
.|+++. ++|+ |-|-|....|.. .|.|.|.
T Consensus 94 tF~~~~l~~g~~Y~f~CSFPGH~~-~MkG~l~ 124 (125)
T TIGR02695 94 TFDVSKLSAGEDYTFFCSFPGHWA-MMRGTVK 124 (125)
T ss_pred EEECCCCCCCCcceEEEcCCCcHH-hceEEEe
Confidence 999863 4786 999999888876 5888875
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=94.11 E-value=1.1 Score=38.51 Aligned_cols=64 Identities=25% Similarity=0.369 Sum_probs=50.5
Q ss_pred cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeec
Q 009127 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSR 281 (543)
Q Consensus 202 ~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 281 (543)
...+.++.|++++|++-+... .|.|.|.+..++ +.+-||+.-.+.++++ .+|.|+++|...
T Consensus 45 ~~~l~lp~g~~v~~~ltS~DV--iHsf~ip~~~~k----------------~d~~PG~~~~~~~~~~-~~G~y~~~C~e~ 105 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSEDV--IHSFWIPELGIK----------------MDAIPGRTNSVTFTPD-KPGTYYGQCAEY 105 (120)
T ss_dssp SSEEEEETTSEEEEEEEESSS---EEEEETTCTEE----------------EEEBTTCEEEEEEEES-SSEEEEEEE-SS
T ss_pred cceecccccceEeEEEEcCCc--cccccccccCcc----------------cccccccceeeeeeec-cCCcEEEcCccc
Confidence 578999999999999998555 688888876544 3567888899999998 799999999865
Q ss_pred cCC
Q 009127 282 FTP 284 (543)
Q Consensus 282 ~~~ 284 (543)
.+.
T Consensus 106 CG~ 108 (120)
T PF00116_consen 106 CGA 108 (120)
T ss_dssp SST
T ss_pred cCc
Confidence 443
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.59 Score=39.77 Aligned_cols=73 Identities=11% Similarity=-0.005 Sum_probs=47.5
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|.|+-+.. ...|-. .+.+.+.|+. ......+++...+.| +.||.|
T Consensus 43 ~ltV~~GdTVtw~~~~d-~~~HnV---------~s~~~~~f~s--------------~~~~~~~G~t~s~Tf--~~~G~Y 96 (115)
T TIGR03102 43 AIRVDPGTTVVWEWTGE-GGGHNV---------VSDGDGDLDE--------------SERVSEEGTTYEHTF--EEPGIY 96 (115)
T ss_pred EEEECCCCEEEEEECCC-CCCEEE---------EECCCCCccc--------------cccccCCCCEEEEEe--cCCcEE
Confidence 36788999999886542 234443 2222233321 111234566665555 789999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|+|=. |..+||-..+.|.
T Consensus 97 ~Y~C~p--H~~~gM~G~I~V~ 115 (115)
T TIGR03102 97 LYVCVP--HEALGMKGAVVVE 115 (115)
T ss_pred EEEccC--CCCCCCEEEEEEC
Confidence 999997 9999999999883
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=89.50 E-value=1.1 Score=42.24 Aligned_cols=77 Identities=10% Similarity=0.141 Sum_probs=55.5
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
+.+.++.|+.+++.+.+.+ ..|.|.+- +-+ ...| +-||....+.|+++.||.
T Consensus 117 ~~l~vp~g~~v~~~~ts~D-V~Hsf~ip-------~~~-----------------~k~d---a~PG~~~~~~~~~~~~G~ 168 (201)
T TIGR02866 117 NELVVPAGTPVRLQVTSKD-VIHSFWVP-------ELG-----------------GKID---AIPGQYNALWFNADEPGV 168 (201)
T ss_pred CEEEEEcCCEEEEEEEeCc-hhhccccc-------ccC-----------------ceEE---ecCCcEEEEEEEeCCCEE
Confidence 3467899999999999864 34554442 221 1223 336788899999999999
Q ss_pred ceeeecchhhh-hcccEEEEEEecCC
Q 009127 492 WNIRSENWARQ-YLGQQFYLRVYSPA 516 (543)
Q Consensus 492 w~~HCHil~He-d~GMm~~~~V~~p~ 516 (543)
+...|--.-.. +..|...+.|.+++
T Consensus 169 y~~~c~e~cG~~h~~M~~~v~v~~~~ 194 (201)
T TIGR02866 169 YYGYCAELCGAGHSLMLFKVVVVERE 194 (201)
T ss_pred EEEEehhhCCcCccCCeEEEEEECHH
Confidence 99999884432 57899999988765
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=88.65 E-value=3.1 Score=39.20 Aligned_cols=78 Identities=13% Similarity=0.070 Sum_probs=55.4
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCc-hhhhh
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSF-LFHKA 136 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~-~~q~~ 136 (543)
...|.+..|+.|++++++.. .+ ||...+. . |+ +..+-||..-+..|++ +++|+|...|.- -....
T Consensus 116 ~~~l~vp~g~~v~~~~ts~D----V~--Hsf~ip~---~-~~---k~da~PG~~~~~~~~~-~~~G~y~~~c~e~cG~~h 181 (201)
T TIGR02866 116 VNELVVPAGTPVRLQVTSKD----VI--HSFWVPE---L-GG---KIDAIPGQYNALWFNA-DEPGVYYGYCAELCGAGH 181 (201)
T ss_pred cCEEEEEcCCEEEEEEEeCc----hh--hcccccc---c-Cc---eEEecCCcEEEEEEEe-CCCEEEEEEehhhCCcCc
Confidence 36899999999999999852 22 5554321 1 11 3456799999999998 589999999983 12222
Q ss_pred ccceeEEEEecCC
Q 009127 137 AGAFGGIRIWSRP 149 (543)
Q Consensus 137 ~Gl~G~liV~~~~ 149 (543)
..|.+.++|.+++
T Consensus 182 ~~M~~~v~v~~~~ 194 (201)
T TIGR02866 182 SLMLFKVVVVERE 194 (201)
T ss_pred cCCeEEEEEECHH
Confidence 4689999988753
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >COG4263 NosZ Nitrous oxide reductase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=87.43 E-value=0.78 Score=47.36 Aligned_cols=79 Identities=16% Similarity=0.224 Sum_probs=54.2
Q ss_pred ceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCch-hhhhc
Q 009127 59 PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL-FHKAA 137 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~-~q~~~ 137 (543)
-+..|++||.|.+.++|-......+| |.-.. .-|+- ..+.|-++-.|.|.+ +.+|.+||.|... .-+.+
T Consensus 558 ~ef~Vkq~DEVt~l~tnld~Ved~th--gfv~p----~~~v~---~~v~pq~tasvtf~a-~kpgv~w~ycs~fchalh~ 627 (637)
T COG4263 558 TEFKVKQGDEVTVLTTNLDEVEDLTH--GFVIP----NYGVN---MEVKPQRTASVTFYA-DKPGVAWYYCSWFCHALHM 627 (637)
T ss_pred EEEEEecCcEEEEEecccceeccccc--eeeec----cCceE---EEEccCCceEEEEEc-cCCeeeehhhhhHHHHHHH
Confidence 37889999999999888765444443 33211 12221 457889999999999 5899999998633 33344
Q ss_pred cceeEEEEec
Q 009127 138 GAFGGIRIWS 147 (543)
Q Consensus 138 Gl~G~liV~~ 147 (543)
-|+|-++|+.
T Consensus 628 em~~rmlve~ 637 (637)
T COG4263 628 EMAGRMLVEA 637 (637)
T ss_pred hhccceeecC
Confidence 5778888863
|
|
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
Probab=87.26 E-value=6.4 Score=31.25 Aligned_cols=65 Identities=14% Similarity=0.323 Sum_probs=36.6
Q ss_pred EEEEEEEcCCcceEEEEEe-CCe--eEEEEEcCccccc--------cccCeEEEcCCCeEEEEEEeCCC---CcceEEEE
Q 009127 213 YRFRISNVGLTTSINFRIQ-GHS--MKLVEVEGSHTLQ--------NTYAALDIHLGQTYSVLVTMDQA---PQDYYIVV 278 (543)
Q Consensus 213 ~rlRiiN~~~~~~~~~~i~-g~~--~~via~DG~~~~p--------~~~~~v~l~pgeR~dv~v~~~~~---~g~y~i~~ 278 (543)
..|.+.|.+.. ...|.+. |+. |.|...+|..+-- .......|.|||...+..+.+.. ||.|.+.+
T Consensus 4 ~~l~v~N~s~~-~v~l~f~sgq~~D~~v~d~~g~~vwrwS~~~~FtQal~~~~l~pGe~~~~~~~~~~~~~~~G~Y~~~a 82 (82)
T PF12690_consen 4 FTLTVTNNSDE-PVTLQFPSGQRYDFVVKDKEGKEVWRWSDGKMFTQALQEETLEPGESLTYEETWDLKDLSPGEYTLEA 82 (82)
T ss_dssp EEEEEEE-SSS--EEEEESSS--EEEEEE-TT--EEEETTTT-------EEEEE-TT-EEEEEEEESS----SEEEEEEE
T ss_pred EEEEEEeCCCC-eEEEEeCCCCEEEEEEECCCCCEEEEecCCchhhheeeEEEECCCCEEEEEEEECCCCCCCceEEEeC
Confidence 46778888875 5666653 444 4444446665521 12457899999999999988863 79998864
|
It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.25 E-value=2.9 Score=36.16 Aligned_cols=74 Identities=9% Similarity=-0.022 Sum_probs=47.6
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|+|+-. +...|-.+.= +... +..-+++....+.....-| +.||.+
T Consensus 55 ~v~v~pGDTVtw~~~--d~~~Hnv~~~---------~~~~-------------~~g~~~~~~~~~~s~~~Tf--e~~G~Y 108 (128)
T COG3794 55 EVTVKPGDTVTWVNT--DSVGHNVTAV---------GGMD-------------PEGSGTLKAGINESFTHTF--ETPGEY 108 (128)
T ss_pred EEEECCCCEEEEEEC--CCCCceEEEe---------CCCC-------------cccccccccCCCcceEEEe--cccceE
Confidence 367889999998765 3346664432 1111 1122333333345555544 459999
Q ss_pred eeeecchhhhhcccEEEEEEec
Q 009127 493 NIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~ 514 (543)
.|.|=. |.-+||-..+.|.+
T Consensus 109 ~Y~C~P--H~~~gM~G~IvV~~ 128 (128)
T COG3794 109 TYYCTP--HPGMGMKGKIVVGE 128 (128)
T ss_pred EEEecc--CCCCCcEEEEEeCC
Confidence 999999 99999999998853
|
|
| >COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.07 E-value=3.4 Score=40.19 Aligned_cols=78 Identities=10% Similarity=-0.046 Sum_probs=58.5
Q ss_pred ceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCC-chhhhhc
Q 009127 59 PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPS-FLFHKAA 137 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H-~~~q~~~ 137 (543)
..|.+..|.+|++.++=. +--++....++.. +...-||...++.+++ +++|+|.-+|+ ..+....
T Consensus 137 n~l~lPv~~~V~f~ltS~-DViHsF~IP~l~~------------k~d~iPG~~~~~~~~~-~~~G~Y~g~Cae~CG~gH~ 202 (247)
T COG1622 137 NELVLPVGRPVRFKLTSA-DVIHSFWIPQLGG------------KIDAIPGMTTELWLTA-NKPGTYRGICAEYCGPGHS 202 (247)
T ss_pred ceEEEeCCCeEEEEEEec-hhceeEEecCCCc------------eeeecCCceEEEEEec-CCCeEEEEEcHhhcCCCcc
Confidence 899999999999988766 3333444444321 3456789999999998 68999999998 3355555
Q ss_pred cceeEEEEecCCC
Q 009127 138 GAFGGIRIWSRPR 150 (543)
Q Consensus 138 Gl~G~liV~~~~~ 150 (543)
.|.|.++|.++++
T Consensus 203 ~M~~~v~vvs~~~ 215 (247)
T COG1622 203 FMRFKVIVVSQED 215 (247)
T ss_pred cceEEEEEEcHHH
Confidence 7999999998653
|
|
| >COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=80.93 E-value=4.6 Score=39.27 Aligned_cols=78 Identities=13% Similarity=0.148 Sum_probs=55.9
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
+.+.++.|+.|++.+... +--|.|.+-+-.+ -+.+-||-...+.+.++.||.
T Consensus 137 n~l~lPv~~~V~f~ltS~-DViHsF~IP~l~~---------------------------k~d~iPG~~~~~~~~~~~~G~ 188 (247)
T COG1622 137 NELVLPVGRPVRFKLTSA-DVIHSFWIPQLGG---------------------------KIDAIPGMTTELWLTANKPGT 188 (247)
T ss_pred ceEEEeCCCeEEEEEEec-hhceeEEecCCCc---------------------------eeeecCCceEEEEEecCCCeE
Confidence 446788999999999977 3445555443222 222335677889999999999
Q ss_pred ceeeecchhh-hhcccEEEEEEecCCC
Q 009127 492 WNIRSENWAR-QYLGQQFYLRVYSPAN 517 (543)
Q Consensus 492 w~~HCHil~H-ed~GMm~~~~V~~p~~ 517 (543)
|-.+|+.+-= -+..|-+.+.|+++++
T Consensus 189 Y~g~Cae~CG~gH~~M~~~v~vvs~~~ 215 (247)
T COG1622 189 YRGICAEYCGPGHSFMRFKVIVVSQED 215 (247)
T ss_pred EEEEcHhhcCCCcccceEEEEEEcHHH
Confidence 9999999764 3566777788877664
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 543 | ||||
| 1aoz_A | 552 | Refined Crystal Structure Of Ascorbate Oxidase At 1 | 7e-45 | ||
| 4a2f_A | 497 | Coriolopsis Gallica Laccase Collected At 12.65 Kev | 6e-24 | ||
| 4a2d_A | 496 | Coriolopsis Gallica Laccase T2 Copper Depleted At P | 6e-24 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 3e-23 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 3e-23 | ||
| 2hrg_A | 496 | Crystal Structure Of Blue Laccase From Trametes Tro | 1e-22 | ||
| 1kya_A | 499 | Active Laccase From Trametes Versicolor Complexed W | 8e-22 | ||
| 3fpx_A | 499 | Native Fungus Laccase From Trametes Hirsuta Length | 9e-22 | ||
| 3pxl_A | 499 | Type-2 Cu-Depleted Fungus Laccase From Trametes Hir | 1e-21 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 2e-21 | ||
| 3div_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 3e-21 | ||
| 3t6v_A | 495 | Crystal Structure Of Laccase From Steccherinum Ochr | 2e-20 | ||
| 2qt6_A | 498 | Crystal Structure Determination Of A Blue Laccase F | 1e-18 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 6e-18 | ||
| 2h5u_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 1e-17 | ||
| 2xyb_A | 497 | Crystal Structure Of A Fully Functional Laccase Fro | 2e-17 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 1e-16 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 1e-16 | ||
| 1v10_A | 521 | Structure Of Rigidoporus Lignosus Laccase From Hemi | 2e-16 | ||
| 3dkh_A | 559 | L559a Mutant Of Melanocarpus Albomyces Laccase Leng | 5e-16 | ||
| 1gw0_A | 559 | Crystal Structure Of Laccase From Melanocarpus Albo | 5e-16 | ||
| 2q9o_A | 559 | Near-Atomic Resolution Structure Of A Melanocarpus | 7e-16 | ||
| 2hzh_A | 499 | Crystal Structure Of Laccase From Coriolus Zonatus | 1e-15 | ||
| 1zpu_A | 534 | Crystal Structure Of Fet3p, A Multicopper Oxidase T | 3e-15 | ||
| 3pps_A | 604 | Crystal Structure Of An Ascomycete Fungal Laccase F | 2e-13 | ||
| 3g5w_A | 318 | Crystal Structure Of Blue Copper Oxidase From Nitro | 3e-06 | ||
| 3zx1_A | 481 | Multicopper Oxidase From Campylobacter Jejuni: A Me | 4e-06 | ||
| 2xu9_A | 439 | Crystal Structure Of Laccase From Thermus Thermophi | 7e-04 |
| >pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 | Back alignment and structure |
|
| >pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 | Back alignment and structure |
|
| >pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 | Back alignment and structure |
|
| >pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 | Back alignment and structure |
|
| >pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 | Back alignment and structure |
|
| >pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 | Back alignment and structure |
|
| >pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 | Back alignment and structure |
|
| >pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 | Back alignment and structure |
|
| >pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 | Back alignment and structure |
|
| >pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 | Back alignment and structure |
|
| >pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 | Back alignment and structure |
|
| >pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 | Back alignment and structure |
|
| >pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 543 bits (1401), Expect = 0.0
Identities = 143/556 (25%), Positives = 234/556 (42%), Gaps = 61/556 (10%)
Query: 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNG 87
R + W++ Y P + + INGQFPGP I A D++++ + N L E +I W+G
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 88 LQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIW 146
+ QR W DG + C I PG+ F Y D G++FY ++AG +G + +
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122
Query: 147 SRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHN--LPFPDGLLINGRGWNG-- 202
PF G+ +L DW+ + + L S + P +L+NGRG
Sbjct: 123 PPQGKKEPFHYD-GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181
Query: 203 ----------------------YTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEV 240
Y F V P +TYR RI++ ++NF I H + +VE
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241
Query: 241 EGSHTLQNTYAALDIHLGQTYSVLVTMDQAP-QDYYIVVSSRFT-PRVLTTTAILHYSNS 298
+G++ + +DI+ G++YSVL+T DQ P ++Y++ V +R P +L+Y +
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPN 301
Query: 299 RRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSA 358
P P T +++++ + +TA+ P P +K +R I L N+
Sbjct: 302 -SVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFLLNTQ 353
Query: 359 PYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMP----------TSPNWGNAY 408
+NG ++AIN VS TP A + + F P T P
Sbjct: 354 NVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTR 413
Query: 409 LQTSVMAANFREFVEIVFQNWE------DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYN 462
+ V E V+++ QN +H+ G+ F+V+G G+++ + N
Sbjct: 414 IGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLN 473
Query: 463 LRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDE 522
L++ R+T ++P WTAI DN G+W ++G
Sbjct: 474 LKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAE-----GVEKV 528
Query: 523 LPIPKNALLCGRARGR 538
IP AL CG
Sbjct: 529 GRIPTKALACGGTAKS 544
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 279 bits (716), Expect = 4e-88
Identities = 117/487 (24%), Positives = 173/487 (35%), Gaps = 66/487 (13%)
Query: 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFL-----I 83
T +T ++ P G + GIL+NG GP I NDN ++V N L P + I
Sbjct: 5 SVDTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSI 63
Query: 84 SWNGLQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGG 142
W+GL QR +W DG G CPI PG F Y G+++Y F G G
Sbjct: 64 HWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGP 123
Query: 143 IRIWSRP-RIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWN 201
+ I+ + + + DWY ++ PD LING+G
Sbjct: 124 MVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGRY 176
Query: 202 G-------YTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALD 254
VE G+ YR R+ ++ + F I GH + ++EV+G T +T L
Sbjct: 177 VGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQ 236
Query: 255 IHLGQTYSVLVTMDQAPQDYYIVVS-----SRFTPRVL--TTTAILHYSNSRRGVSGPIP 307
I GQ YS ++ +Q +Y+I + +AIL Y+ +
Sbjct: 237 IFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAA-------N 289
Query: 308 GGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRY 367
PTT + Q +L A P G G ++ L S R+
Sbjct: 290 ADPTTSANPNPAQLNE--ADLHALIDPAAP-GIPTPGAADVNLRFQLGFSGG------RF 340
Query: 368 AINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQ 427
IN ++ P L L SV + VE+V
Sbjct: 341 TINGTAYESPSVPTLLQIMSGAQSANDLLP------------AGSVYELPRNQVVELVVP 388
Query: 428 NWEDTVQ-SYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPR-SWTAIYMA 485
+H+ G++F VV A + YN + V R + I
Sbjct: 389 AGVLGGPHPFHLHGHAFSVVRS-------AGSSTYNFVNPVKRDVVSLGVTGDEVTIRFV 441
Query: 486 LDNVGMW 492
DN G W
Sbjct: 442 TDNPGPW 448
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 264 bits (678), Expect = 2e-82
Identities = 114/488 (23%), Positives = 174/488 (35%), Gaps = 70/488 (14%)
Query: 31 FTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFL-----ISW 85
IT + P G +Q +++NG PGP + D ++V + L + I W
Sbjct: 6 ADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHW 65
Query: 86 NGLQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIR 144
+G Q +W DG CPI PG +F Y Q DQ G+++Y G G
Sbjct: 66 HGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFV 125
Query: 145 IWSRPRIPV--PFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWN- 201
++ P P + D + DWY H D LING+G
Sbjct: 126 VYD-PNDPHASRYDVDNDDTVITLADWY---H---TAAKLGPRFPGGADATLINGKGRAP 178
Query: 202 ------GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDI 255
V G+ YRFR+ ++ + F I GH++ ++EV+ ++ ++ I
Sbjct: 179 SDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQI 238
Query: 256 HLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVL---TTTAILHYSNSRRGVSGPIPGGPTT 312
Q YS ++ +QA +Y+I + F +AIL Y + P T
Sbjct: 239 FAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGA----PAVEPTTNQT 294
Query: 313 EIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSV 372
LN+ +L P P + + I +A + NG + IN
Sbjct: 295 TSVKPLNEV-----DLHPLVSTPVPGAPSS---GGVDKAINMAFN---FNGS-NFFINGA 342
Query: 373 SFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDT 432
SFVP P+ L + + SV +EI F
Sbjct: 343 SFVPPTVPVLLQILS------------GAQTAQDLLPSGSVYVLPSNASIEISFPATAAA 390
Query: 433 VQS---YHIDGYSFFVVGMDGGQWTPASRTRYNL-----RDTVARSTTQVYPRSWTAIYM 484
+ +H+ G++F VV G T YN RD V ST I
Sbjct: 391 PGAPHPFHLHGHTFAVVRSAGS-------TVYNYDNPIFRDVV--STGTPAAGDNVTIRF 441
Query: 485 ALDNVGMW 492
+N G W
Sbjct: 442 DTNNPGPW 449
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 264 bits (676), Expect = 6e-82
Identities = 119/514 (23%), Positives = 178/514 (34%), Gaps = 67/514 (13%)
Query: 1 MRDSRVLCSLIALLLSLAVHGVYGDSPYRFFTWKITYGDIYPLGVKQ-QGILINGQFPGP 59
M L SL+ L L+ I ++ P G + G P
Sbjct: 1 MPSFASLKSLVVLSLTSLSLAAT-----VALDLHILNANLDPDGTGARSAVTAEGTTIAP 55
Query: 60 QIDAVTNDNLIISVYNYLREPFL-----ISWNGLQQRRNSWQDGVYGTT-CPIPPGKNFT 113
I +D I+V + L + + I W+G Q + DG CPI P ++F
Sbjct: 56 LITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFV 115
Query: 114 YVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPV--PFPPPAGDFTVLAGDWYR 171
Y Q G+Y+Y G G ++ P P + + DWY
Sbjct: 116 YDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYD-PNDPHLSLYDVDDASTVITIADWYH 174
Query: 172 SNHYVLRRLLDSGHNLPFPDGLLINGRGWNGY--------TFTVEPGRTYRFRISNVGLT 223
S VL + P PD LING G N +V+ G+ YRFRI +
Sbjct: 175 SLSTVL--FPNPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCF 232
Query: 224 TSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFT 283
+ F I GH M ++EV+G T +L I GQ YSV+V +QA +Y+I +
Sbjct: 233 PNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNG 292
Query: 284 PRVL---TTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGS 340
+AI Y G + P +LN+A I + P P
Sbjct: 293 RNGFTGGINSAIFRYQ----GAAVAEPTTSQNSGT-ALNEANLIPLINPGAPGNPVPG-- 345
Query: 341 YHYGMIKISRTITLANSAPYMNG-KQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMP 399
+ L N + IN F+P P+ L S
Sbjct: 346 ------GADINLNLRIG---RNATTADFTINGAPFIPPTVPVLLQIL----------SGV 386
Query: 400 TSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRT 459
T+PN + +V++ + +EI + +H+ G++F VV G +
Sbjct: 387 TNPN--DLLPGGAVISLPANQVIEISIPGGGN--HPFHLHGHNFDVVRTPGS-------S 435
Query: 460 RYNLRDTVARSTTQVYPR-SWTAIYMALDNVGMW 492
YN + V R + DN G W
Sbjct: 436 VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPW 469
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 256 bits (657), Expect = 2e-79
Identities = 102/485 (21%), Positives = 157/485 (32%), Gaps = 61/485 (12%)
Query: 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFL-----I 83
I DI P G + + G FPGP I DN I +N L E + I
Sbjct: 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSI 64
Query: 84 SWNGLQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGG 142
W+G Q+ +W DG T CPI G +F+Y G+Y+Y G G
Sbjct: 65 HWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGP 124
Query: 143 IRIWSRPRIPV--PFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRG- 199
++ P P + + DWY + D LI+G G
Sbjct: 125 FVVYD-PNDPDANLYDVDDDTTIITLADWYHVLAKEM-----GAGGAITADSTLIDGLGR 178
Query: 200 -------WNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAA 252
TVE G+ YR R+ ++ + +F I GH M ++E +G + + T
Sbjct: 179 THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDE 238
Query: 253 LDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVL---TTTAILHYSNSRRGVSGPIPGG 309
+ I Q YS ++ +Q +Y+I + +AIL Y +
Sbjct: 239 IQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGA--------TTA 290
Query: 310 PTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAI 369
+A +++ I +L P + + L+ + I
Sbjct: 291 DPVTVASTVHTKCLIETDLHPLSRNGVPGNPH---QGGADCNLNLSLG----FACGNFVI 343
Query: 370 NSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNW 429
N VSF P P+ L L SV++ +EI
Sbjct: 344 NGVSFTPPTVPVLLQICSGANTAADLLP------------SGSVISLPSNSTIEIALPAG 391
Query: 430 EDTVQ-SYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYP-RSWTAIYMALD 487
+H+ G+ F V N D + R + I D
Sbjct: 392 AAGGPHPFHLHGHDFAVSESASNST-------SNYDDPIWRDVVSIGGVGDNVTIRFCTD 444
Query: 488 NVGMW 492
N G W
Sbjct: 445 NPGPW 449
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 253 bits (649), Expect = 7e-78
Identities = 107/494 (21%), Positives = 170/494 (34%), Gaps = 67/494 (13%)
Query: 29 RFFTWKITYGDIYPLGV-KQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWN 86
F W + G+ + I NGQFP P I D + I + N + + ++
Sbjct: 3 HTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFH 62
Query: 87 GLQQRRNSWQDGVYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRI 145
GL Q + DGV T CPI PG Y +G+Y+Y G G I
Sbjct: 63 GLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFII 122
Query: 146 WSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNL----PFPDGLLINGRGWN 201
P + + ++ +WY L + S +N P P L++N
Sbjct: 123 -KDDSFPYDYD---EELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTM-- 176
Query: 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTY 261
T+ V+P TY RI NVG S F I+ H M +VE++G T +N L I + Q Y
Sbjct: 177 NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRY 236
Query: 262 SVLVTMDQAPQDYYIVVSSRFTPRV--------LTTTAILHYSNSRRGVSGPIPGGPTTE 313
+VLV + ++ + L T+ + Y+ + PT
Sbjct: 237 TVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKT--------AALPTQN 288
Query: 314 IAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLA-NSAPYMNGKQRYAINSV 372
S++ + L + IT+ NG N++
Sbjct: 289 YVDSIDNFLD-DFYLQPYEKEAIYG--------EPDHVITVDVVMDNLKNGVNYAFFNNI 339
Query: 373 SFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDT 432
++ P + V + G + + T E VEIV N +
Sbjct: 340 TYTAPKVPTLMT-------VLSSGDQANNSEIYGS--NTHTFILEKDEIVEIVLNNQDTG 390
Query: 433 VQSYHIDGYSFFVVGMDGGQWTPASRTRYN--------------LRDTVARSTTQVYPRS 478
+H+ G++F + D ++ RDT+ V P+S
Sbjct: 391 THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLY-----VRPQS 445
Query: 479 WTAIYMALDNVGMW 492
I DN G+W
Sbjct: 446 NFVIRFKADNPGVW 459
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 254 bits (650), Expect = 1e-77
Identities = 111/489 (22%), Positives = 172/489 (35%), Gaps = 59/489 (12%)
Query: 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNG 87
R + + I P G + + NG PGP I A DNLII V N L I W+G
Sbjct: 68 REYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHG 127
Query: 88 LQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIW 146
++Q + DGV G T CPI PG TY Q Q G+ +Y F G FG + I
Sbjct: 128 IRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLII- 185
Query: 147 SRPRIPVPFPPPAGDFTVLA-GDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRG-WNG-- 202
+ D V+ DW + + + G P + L+NG ++
Sbjct: 186 -NGPATADYD---EDVGVIFLQDWAHESVFEIWDTARLG-APPALENTLMNGTNTFDCSA 240
Query: 203 ------------YTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTY 250
+ T G YR R+ NVG+ + F I H++ ++ + + T
Sbjct: 241 STDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTT 300
Query: 251 AALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRV----LTTTAILHYSNSRRGVSGPI 306
L I +GQ Y V+V + A +Y+I + T T IL Y +S
Sbjct: 301 DTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSS------- 353
Query: 307 PGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQR 366
PT+ + + P ++ +
Sbjct: 354 IANPTSVGTTPRGTCEDE--PVASLVPHLALDVG--------GYSLVDEQVSSAFTNYFT 403
Query: 367 YAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVF 426
+ INS S + + F +F + NA E+V V
Sbjct: 404 WTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNA----------NEEWVVYVI 453
Query: 427 QNWEDTVQS--YHIDGYSFFVVGMDGGQWTP-ASRTRYNLRDTVARSTTQVYPRSWTAIY 483
++ H+ G+ FF+V + + S ++NL + R + + AI
Sbjct: 454 EDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIA 513
Query: 484 MALDNVGMW 492
LDN G W
Sbjct: 514 FKLDNPGSW 522
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 236 bits (604), Expect = 5e-71
Identities = 108/488 (22%), Positives = 169/488 (34%), Gaps = 52/488 (10%)
Query: 31 FTWKITYGDIYPLGV-KQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGL 88
F + P GV K++ +LING GP I A D + ++V N L I W+G+
Sbjct: 38 FNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGI 97
Query: 89 QQRRNSWQDGVYGTT-CPIPP-GKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIW 146
Q+ + DG G T CPIPP G TY +A Q G+ +Y F G G I+I
Sbjct: 98 XQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQIN 156
Query: 147 SRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNG---- 202
+P D+Y L + PF D +LING N
Sbjct: 157 GPASLPYDID----LGVFPITDYYYRAADDLVHFTQNNAP-PFSDNVLINGTAVNPNTGE 211
Query: 203 ---YTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQ 259
T+ PG+ +R RI N + H+M ++ + T +L + +GQ
Sbjct: 212 GQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQ 271
Query: 260 TYSVLVTMDQAPQDYYIVVSSR-----FTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEI 314
Y V++ +AP +Y+ V+ AI HY+ + G PT E
Sbjct: 272 RYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP-------GGLPTDEG 324
Query: 315 AWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSF 374
++ ++ PR P S+ T+ +A + +N
Sbjct: 325 TPPVDHQCLDTLDVRPVVPRSVPVNSFVKR---PDNTLPVALD-LTGTPLFVWKVNGSDI 380
Query: 375 VPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQ 434
P + + + TS + +Q + +E +
Sbjct: 381 NVDWGK---------PIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPH 431
Query: 435 SYHIDGYSFFVVGMDGGQWTP----------ASRTRYNLRDTVARSTTQVYPRSWTAIYM 484
H+ G+ F V+G R N + R TT + W +
Sbjct: 432 PMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAF 491
Query: 485 ALDNVGMW 492
DN G W
Sbjct: 492 RTDNPGAW 499
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 7e-55
Identities = 62/257 (24%), Positives = 96/257 (37%), Gaps = 18/257 (7%)
Query: 29 RFFTWKITYGDIYPLG-VKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNG 87
R F I I +G NGQ P P I + D++ ++V N P I W+G
Sbjct: 3 REFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHG 62
Query: 88 LQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFY---FPSFLFHKAAGAFGGI 143
+ QR DGV T I PG FTY +A + G+ +Y G +G +
Sbjct: 63 MLQRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPL 121
Query: 144 RIWSRPRIPVPFPPPA-GDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNG 202
+ P+ P+P D+ ++ DW + + G D IN + +
Sbjct: 122 IV--EPKNPLPIEKTVTKDYILMLSDWV---SSWANKPGEGGIPGDVFDYYTINAKSFPE 176
Query: 203 -YTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAA--LDIHLGQ 259
V+ G R R+ G GH ++ +G L + I G+
Sbjct: 177 TQPIRVKKGDVIRLRLIGAGDHV-HAIHTHGHISQIAFKDG-FPLDKPIKGDTVLIGPGE 234
Query: 260 TYSVLVTMDQAPQDYYI 276
Y V++ MD P + I
Sbjct: 235 RYDVILNMDN-PGLWMI 250
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 9e-53
Identities = 68/309 (22%), Positives = 109/309 (35%), Gaps = 24/309 (7%)
Query: 29 RFFTWKITYGDIYPL-GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNG 87
R F I I G+ + NGQ PGP I D++I++V N P I W+G
Sbjct: 4 REFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHG 63
Query: 88 LQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFY---FPSFLFHKAAGAFGGI 143
+ Q+ DGV G T PI G ++TY +A D+IG+ +Y G +G +
Sbjct: 64 VHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPL 122
Query: 144 RIWSRPRIPVPFPPP-AGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNG 202
+ P+ P+P D ++ W V + + G + D +N + +
Sbjct: 123 IV--DPKQPLPIEKRVTKDVIMMMSTWE---SAVADKYGEGGTPMNVADYFSVNAKSFPL 177
Query: 203 Y-TFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYA-ALDIHLGQT 260
V+ G + R G GH M + +G YA + + G+
Sbjct: 178 TQPLRVKKGDVVKIRFFGAGGGI-HAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGER 236
Query: 261 YSVLVTMDQAPQDYYIVVSSRF-----TPRVLTTTAILHY---SNSRRGVSGPIPGGPTT 312
Y V++ D P + ++ Y V P
Sbjct: 237 YDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVPVDDWYVWKDKDYDPNF 295
Query: 313 EIAWSLNQA 321
+ SL Q
Sbjct: 296 FYSESLKQG 304
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 4e-39
Identities = 76/474 (16%), Positives = 138/474 (29%), Gaps = 74/474 (15%)
Query: 25 DSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLIS 84
T + G + + G FPGP + D + +++ N L EP +
Sbjct: 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLH 72
Query: 85 WNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQI-GSYFYFPSFLFHKAAGAFGGI 143
W+GL D + IPPG+++TY ++ G+++Y P A F G+
Sbjct: 73 WHGLPIS--PKVDDPF---LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGL 127
Query: 144 R---IWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW 200
+ +P A + ++ D N D +L+NG
Sbjct: 128 LGALVVESSLDAIPELREAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGALR 187
Query: 201 NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHL--G 258
V T R R+ N +Q H + L+ +G L+ ++ L G
Sbjct: 188 ---PTLVAQKATLRLRLLNASNARYYRLALQDHPLYLIAADG-GFLEEPLEVSELLLAPG 243
Query: 259 QTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSL 318
+ VLV + + + + R + P IA
Sbjct: 244 ERAEVLVRLRK-EGRFLLQALP--YDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKN 300
Query: 319 NQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPAD 378
+ + L+ P P ++R + L R+ IN F
Sbjct: 301 PKPLPLPKALSPFPTLPAPV---------VTRRLVLTEDMMAA----RFFINGQVFDHRR 347
Query: 379 TPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHI 438
LK ++ +N D +H+
Sbjct: 348 VDLKGQ----------AQTV-----------------------EVWEVENQGDMDHPFHL 374
Query: 439 DGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492
+ F V+ + G + + +D V + + + L G
Sbjct: 375 HVHPFQVLSVGGRPFPYRAW-----KDVV-----NLKAGEVARLLVPLREKGRT 418
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 2e-31
Identities = 51/241 (21%), Positives = 81/241 (33%), Gaps = 29/241 (12%)
Query: 44 GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103
G+ +G NG+ PGP + A D L I N P I ++G+ + DG G
Sbjct: 51 GIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGV---HRATMDGTPGIG 107
Query: 104 -CPIPPGKNFTYVLQAKDQIGSYFY---FPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPA 159
I PG++FTY A G++ Y H A G +GG + P+ PP
Sbjct: 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIV--EPKE--GRPPAD 162
Query: 160 GDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFT--VEPGRTYRFRI 217
+ ++ + + +NG ++ F V+ R +
Sbjct: 163 DEMVMVMNGYNTDGG-------------DDNEFYSVNGLPFHFMDFPVKVKQHELVRIHL 209
Query: 218 SNVGLTTSIN-FRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYI 276
NV IN F I G+ T + GQ + + P +
Sbjct: 210 INVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPY-PGKFMF 268
Query: 277 V 277
Sbjct: 269 H 269
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 123 bits (309), Expect = 2e-30
Identities = 83/481 (17%), Positives = 136/481 (28%), Gaps = 79/481 (16%)
Query: 24 GDSPYRFFTWKITYG--DIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPF 81
+ T +I ++ G K NG P P+I+ D L I V N L+E
Sbjct: 46 KEKNIFHATLEIKENHIELIK-GKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEAT 104
Query: 82 LISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQA-KDQIGSYFYFPSFLF----HKA 136
I W+G+ QDG PI G+ Y + +D G+Y+Y P +
Sbjct: 105 TIHWHGVPVP--PDQDGS--PHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVF 160
Query: 137 AGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDW-YRSNHYVLRRLLDSGHNLPFPDGLLI 195
G G I + + ++ D N + L+ N + +LI
Sbjct: 161 MGLAGAFVI----KAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLI 216
Query: 196 NGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDI 255
NG+ ++ R RI N +N RIQG LV +G ++ T ++
Sbjct: 217 NGQFK----PKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDG-GLIEKTIYKEEL 271
Query: 256 HL--GQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTE 313
L VL+ + + + + P
Sbjct: 272 FLSPASRVEVLIDAPK--------------DGNFKLESAYYDRDKMMVKEEPNTLFLANI 317
Query: 314 IAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPY--MNGKQRYAINS 371
N + P + + S + + IN
Sbjct: 318 NLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINR 377
Query: 372 VSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWED 431
S+ L LG + + + N
Sbjct: 378 KSYDLKRIDLSSK----------LGVV-----------------------EDWIVINKSH 404
Query: 432 TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491
+HI G F ++ + R LRDT+ V P + M D G+
Sbjct: 405 MDHPFHIHGTQFELISSKLNGKVQKAEFRA-LRDTI-----NVRPNEELRLRMKQDFKGL 458
Query: 492 W 492
Sbjct: 459 R 459
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 8e-24
Identities = 66/483 (13%), Positives = 123/483 (25%), Gaps = 81/483 (16%)
Query: 27 PYRFFTWKITYGD--IYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLIS 84
++ +I +YP + +G PGP ++ N P +
Sbjct: 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVH 94
Query: 85 WNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKA----AGAF 140
+G R + DG PG Y + + +Y + A G
Sbjct: 95 LHGSFSR--AAFDGW--AEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQA 150
Query: 141 GGIRIWSRPRIPVPFPPPAGDFTV-LAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRG 199
G + + P G+F + + + + N + D + +NG+
Sbjct: 151 GLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQP 210
Query: 200 WNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHS-------MKLVEVEGSHTLQ-NTYA 251
W F R YRFR + ++ S K++ + +
Sbjct: 211 W---PFKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTS 267
Query: 252 ALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPT 311
L I + + Y V+ + + + + T ++ V + T
Sbjct: 268 LLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDT---DYDNTDKVMRFVVADDT 324
Query: 312 TEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINS 371
T+ S+ A P P+P T + + IN
Sbjct: 325 TQPDTSVVPAN------LRDVPFPSP-------------TTNTPRQFRFGRTGPTWTING 365
Query: 372 VSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWED 431
V+F L + G +
Sbjct: 366 VAFADVQNRLLA-----------------NVPVGTVERWE-------------LINAGNG 395
Query: 432 TVQSYHIDGYSFFVVGMDGGQWT-PASRTRYNLRDTVARSTTQVYPRSWTAIYMAL-DNV 489
HI F V+ G L+D V + R +
Sbjct: 396 WTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVV-----WLGRRETVVVEAHYAPFP 450
Query: 490 GMW 492
G++
Sbjct: 451 GVY 453
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-23
Identities = 78/451 (17%), Positives = 139/451 (30%), Gaps = 39/451 (8%)
Query: 31 FTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQ 90
I G G NG GP + + + +YN L E + W+GL+
Sbjct: 20 IQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEV 79
Query: 91 RRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFP----SFLFHKAAGAFGGIRIW 146
DG IPPG + L + ++ P A G G + I
Sbjct: 80 PGEV--DGG--PQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIE 135
Query: 147 SRPRIPVPFPPPAG--DFTVLAGDW--YRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNG 202
+ + P G D V+ D + + + F D LL NG +
Sbjct: 136 DDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY-- 193
Query: 203 YTFTVEPGRTYRFRISNVGLTTSINFRI-QGHSMKLVEVEGSHTLQ-NTYAALDIHLGQT 260
P R R+ N S+NF + ++ +G + + L + +G+
Sbjct: 194 -PQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGER 252
Query: 261 YSVLVTM-DQAPQDYYIVVSSRFTPRVLT---TTAILHYSNSRRGVSGPIPGGPTTEIAW 316
+ VLV + D P D + S+ + ++ SG +P ++ A
Sbjct: 253 FEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPAL 312
Query: 317 SLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVP 376
+ ++R + P + G + + + + M +N ++
Sbjct: 313 PSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGG 372
Query: 377 ADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSY 436
F + N A E I + + +
Sbjct: 373 K---------FDFHHANKINGQAFDMNKPMF-----AAAKGQYERWVISGVG-DMMLHPF 417
Query: 437 HIDGYSFFVVGMDGGQWTPASRTRYNLRDTV 467
HI G F ++ +G P + R +DTV
Sbjct: 418 HIHGTQFRILSENG---KPPAAHRAGWKDTV 445
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 1e-23
Identities = 55/323 (17%), Positives = 101/323 (31%), Gaps = 34/323 (10%)
Query: 53 NGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNF 112
P I + +++ N L EP ++ W+G D + I PG+++
Sbjct: 32 AEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAH--PSFAITPGESY 87
Query: 113 TYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIR---IWSRPRIPVPFPPPAGDFTVLAGDW 169
Y ++ G+Y Y P A + G I + F D ++ D
Sbjct: 88 NYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSDLGFKYGVNDLPLVISDR 147
Query: 170 YRSNHYVLRRL-LDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINF 228
+ + +L+NG F + G YR R+ N
Sbjct: 148 RFIGGAPVYNPTPMEMIAGFLGNAVLVNGVKDA--VFKLSGGS-YRLRLVNGSNARLYML 204
Query: 229 RIQGHS-----MKLVEVEGSHTLQNTYAALDIHL--GQTYSVLVTMDQAPQDYYIVVSSR 281
I + M+L+ V+ L + L + V+V + + Y++ ++
Sbjct: 205 SIVKKNGDVVPMRLIAVDQ-GFLARPIEVRALFLAPAERAEVVVEL---GEGVYLLKNTP 260
Query: 282 FTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSY 341
F P L G+ +P G IA L + + + A P
Sbjct: 261 FDPMHLEMG---------HGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPK- 310
Query: 342 HYGMIKISRTITLANSAPYMNGK 364
++L+ +NG
Sbjct: 311 --PTRTRRFALSLSGMQWTINGM 331
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 95.4 bits (237), Expect = 3e-21
Identities = 47/239 (19%), Positives = 80/239 (33%), Gaps = 18/239 (7%)
Query: 52 INGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKN 111
ING++ GP I D++ + N L E ++ GLQ G + P +
Sbjct: 43 INGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVP--GPLMGG--PARMMSPNAD 98
Query: 112 FTYVLQAKDQIGSYFYFPSFLFHKA----AGAFGGIRIWSRPRIPVPFPPPAG--DFTVL 165
+ VL + + +Y + A G G + +P P G DF V+
Sbjct: 99 WAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVI 158
Query: 166 AGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTS 225
D N + G D LL+NG V G R R+ N +
Sbjct: 159 IQDKRLDNFGTP-EYNEPGSGGFVGDTLLVNGVQS--PYVEVSRGW-VRLRLLNASNSRR 214
Query: 226 INFRI-QGHSMKLVEVEGSHTLQNTYAALDIHL--GQTYSVLVTMDQAPQDYYIVVSSR 281
++ G + ++ + L + + L G+ +LV M + +
Sbjct: 215 YQLQMNDGRPLHVISGDQGF-LPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAA 272
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 88.8 bits (220), Expect = 5e-19
Identities = 48/246 (19%), Positives = 78/246 (31%), Gaps = 25/246 (10%)
Query: 44 GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFL--ISWNGLQQRRNSWQDGVYG 101
GV+ PG I D + ++ N+ I + + G
Sbjct: 45 GVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT-------GPGGG 97
Query: 102 TT-CPIPPGKNFTYVLQAKDQIGSYFY---FPSFLFHKAAGAFGGIRIWSRPRIPVPFPP 157
PG T+ +A G Y Y H A G +G I + P+ P
Sbjct: 98 AESSFTAPGHTSTFNFKAL-NPGLYIYHCATAPVGMHIANGMYGLILV--EPK--EGLAP 152
Query: 158 PAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPF---PDGLLINGRG---WNGYTFTVEPGR 211
++ ++ GD+Y + L D ++ NG + + T + G
Sbjct: 153 VDREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTTDENSLTAKVGE 212
Query: 212 TYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAP 271
T R I N G +F + G V VEG + I G V ++ P
Sbjct: 213 TVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV-P 271
Query: 272 QDYYIV 277
+ +V
Sbjct: 272 GTFILV 277
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 88.0 bits (218), Expect = 8e-19
Identities = 46/248 (18%), Positives = 76/248 (30%), Gaps = 27/248 (10%)
Query: 44 GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFL--ISWNGLQQRRNSWQDGVYG 101
NG+ PGP + D + + + N+ + + ++G G
Sbjct: 180 NTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234
Query: 102 TTCPIPPGKNFTYVLQAKDQIGSYFY---FPSFLFHKAAGAFGGIRIWSRPRIPVPFPPP 158
T PG+ +A G Y Y PS H G +G + + P P
Sbjct: 235 FT-QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLV--EPE--GGLPQV 288
Query: 159 AGDFTVLAGDWYRSNHYVLRRLLDSGHNLPF---PDGLLINGRGWNGYT----FTVEPGR 211
+F V+ G+ Y + + + P+ L NG T G
Sbjct: 289 DREFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKPEYFLFNGS-VGSLTRSHPLYASVGE 347
Query: 212 TYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAA--LDIHLGQTYSVLVTMDQ 269
T R G + +F + G V GS + + G V +D+
Sbjct: 348 TVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR 407
Query: 270 APQDYYIV 277
Y +V
Sbjct: 408 -AGRYILV 414
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 89.2 bits (220), Expect = 1e-18
Identities = 47/273 (17%), Positives = 89/273 (32%), Gaps = 43/273 (15%)
Query: 21 GVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREP 80
Y YR +T + + V+++ + GPQ+ A D + I N P
Sbjct: 777 SKYKKVVYRQYT-----DSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATRP 831
Query: 81 FLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQI---------GSYFYFP-- 129
+ I +G+Q T P PG+ TYV + ++ + Y+
Sbjct: 832 YSIHAHGVQT--------ESSTVTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTV 883
Query: 130 SFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWY------------RSNHYVL 177
+ +G G + + RP + V P +F +L + + +
Sbjct: 884 DQVKDLYSGLIGPLIVCRRPYLKVFNPRRKLEFALLFLVFDENESWYLDDNIKTYSDHPE 943
Query: 178 RRLLDSGHNLPFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLTTSIN-FRIQGHSM 235
+ D + INGR + N T+ G + + +G ++ GHS
Sbjct: 944 KVNKDDEEFIESNKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSF 1003
Query: 236 KLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMD 268
+ + DI G ++ +
Sbjct: 1004 QYKHRGVYSS-----DVFDIFPGTYQTLEMFPR 1031
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 81.9 bits (201), Expect = 2e-16
Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 41/251 (16%)
Query: 52 INGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNS----WQDGVYG---TTC 104
+ F GP I A T D + + + N P+ +G+ + + D
Sbjct: 88 VWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADD 147
Query: 105 PIPPGKNFTYVLQAKDQ---------IGSYFYFP--SFLFHKAAGAFGGIRIWSR-PRIP 152
+ PG+ +TY+L A ++ + Y A+G G + I +
Sbjct: 148 KVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDK 207
Query: 153 VPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRG-------WNGYTF 205
+F V+ + + L + + + P NGYTF
Sbjct: 208 EKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSVNGYTF 267
Query: 206 ------TVEPGRTYRFRISNVGLTTSIN-FRIQGHSMKLVEVEGSHTLQNTYAALDIHLG 258
++ ++ + +G ++ G + + + +++
Sbjct: 268 GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQA---LTNKNYRI-----DTINLFPA 319
Query: 259 QTYSVLVTMDQ 269
+ +
Sbjct: 320 TLFDAYMVAQN 330
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 53.4 bits (127), Expect = 1e-07
Identities = 35/289 (12%), Positives = 79/289 (27%), Gaps = 53/289 (18%)
Query: 21 GVYGDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREP 80
G Y YR +T + ++ + GP I A D + ++ +N P
Sbjct: 418 GSYKKLVYREYTD-----ASFTNRKERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYP 472
Query: 81 FLISWNGLQQRRNS-----------WQDGVYGTTCPIPPGKNFTYVLQAKDQIG------ 123
I G++ +N+ V + + P + FTY ++G
Sbjct: 473 LSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADP 532
Query: 124 ---SYFYFP--SFLFHKAAGAFGGIRIWSRPRIPVPFPPPAG---DFTVL------AGDW 169
+ Y+ G G ++I + +F +
Sbjct: 533 VCLAKMYYSAVDPTKDIFTGLIGPMKI-CKKGSLHANGRQKDVDKEFYLFPTVFDENESL 591
Query: 170 YRSNHYVLRRLLDSGHNLPFPDGLLIN-GRGWNGYTF------TVEPGRTYRFRISNVG- 221
++ + + D N NG+ + T+ G + + + + G
Sbjct: 592 LLEDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGN 651
Query: 222 LTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQA 270
G++ ++ + ++ + D
Sbjct: 652 EADVHGIYFSGNTYLWRGERRDT--------ANLFPQTSLTLHMWPDTE 692
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 84.9 bits (210), Expect = 4e-18
Identities = 52/245 (21%), Positives = 86/245 (35%), Gaps = 21/245 (8%)
Query: 44 GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103
GV+ + +G PG I D + + N P + + + Q G T
Sbjct: 55 GVEYRYWTFDGDVPGRMIRVREGDTVEVEFSN---NPSSTVPHNVDFHAATGQGGGAAAT 111
Query: 104 CPIPPGKNFTYVLQAKDQIGSYFY---FPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAG 160
PG+ T+ +A Q G Y Y H A G +G I + + P
Sbjct: 112 -FTAPGRTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMYGLILVEPKE----GLPKVDK 165
Query: 161 DFTVLAGDWYRSNHYVLRRLLDSGHNLPF---PDGLLINGRGWNGYT----FTVEPGRTY 213
+F ++ GD+Y + L + P+ ++ NG T + G T
Sbjct: 166 EFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHV-GALTGDNALKAKAGETV 224
Query: 214 RFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQD 273
R + N G +F + G V VEG + + + G + V +D P +
Sbjct: 225 RMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGN 283
Query: 274 YYIVV 278
Y +V
Sbjct: 284 YTLVD 288
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 78.9 bits (194), Expect = 2e-16
Identities = 33/241 (13%), Positives = 58/241 (24%), Gaps = 52/241 (21%)
Query: 52 INGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKN 111
PGP I+ D L I N + + +GL DG + PG
Sbjct: 29 GKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGL--DYEISSDGTAMNKSDVEPGGT 86
Query: 112 FTYVLQAK------------DQIGSYFYFPSFLFHK------AAGAFGGIRIWSRPRIPV 153
TY + G + Y + + G +G + + R +
Sbjct: 87 RTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIV--RRKGD- 143
Query: 154 PFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTY 213
P T++ D +N G F G
Sbjct: 144 --VLPDATHTIVFNDMTINNRK-----------------------PHTGPDFEATVGDRV 178
Query: 214 RFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHL---GQTYSVLVTMDQA 270
+ G F + GH + +D + ++ + +
Sbjct: 179 EIVMITHGEYYH-TFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEG 237
Query: 271 P 271
Sbjct: 238 V 238
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 78.6 bits (193), Expect = 5e-16
Identities = 34/269 (12%), Positives = 61/269 (22%), Gaps = 52/269 (19%)
Query: 24 GDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLI 83
+ K+ + + PGP I+ D L I N + +
Sbjct: 42 APAGGEVRHLKMYAEKLADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASL 101
Query: 84 SWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKD------------QIGSYFY---- 127
+GL DG + PG TY + G + Y
Sbjct: 102 HVHGL--DYEISSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHV 159
Query: 128 --FPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGH 185
G +G + + R + P T++ D +N
Sbjct: 160 VGTEHGTGGIRNGLYGPVIV--RRKGD---VLPDATHTIVFNDMTINNRK---------- 204
Query: 186 NLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT 245
G F G + G F + GH
Sbjct: 205 -------------PHTGPDFEATVGDRVEIVMITHG-EYYHTFHMHGHRWADNRTGILTG 250
Query: 246 LQNTYAALDIHL---GQTYSVLVTMDQAP 271
+ +D + ++ + +
Sbjct: 251 PDDPSRVIDNKITGPADSFGFQIIAGEGV 279
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 74.3 bits (182), Expect = 2e-14
Identities = 69/509 (13%), Positives = 128/509 (25%), Gaps = 115/509 (22%)
Query: 40 IYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLRE-------------------- 79
++ + NG FPGP I+ N+N+ + N L
Sbjct: 39 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEP 98
Query: 80 --PFLISWNGLQQRRNSWQDGV---YGTTCPIPPGKNF---TYVLQAKDQIGSYFYFPSF 131
++ +G DG + + G F Y + + +Y
Sbjct: 99 EVKTVVHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHA 156
Query: 132 LFHKA----AGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWY-----------RSNHYV 176
+ AG G I + P D +L D +
Sbjct: 157 MALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPS 216
Query: 177 LRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRI-QGHSM 235
S + +L+NG+ W + R YRFR+ N T + N + G
Sbjct: 217 PSLPNPSIVPAFCGETILVNGKVW---PYLEVEPRKYRFRVINASNTRTYNLSLDNGGDF 273
Query: 236 KLVEVEGSHTLQ-NTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILH 294
+ +G + + + + Y +++ + I+ +S + +
Sbjct: 274 IQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDAN 333
Query: 295 YSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITL 354
R V+ P+ + L AS P I+ RT+ L
Sbjct: 334 IMQFR--VTKPLAQKDESRKPKYL-----------ASYPSVQH------ERIQNIRTLKL 374
Query: 355 ANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVM 414
A + G+ +N+ + + +G+
Sbjct: 375 AGT-QDEYGRPVLLLNNKRWHDP-----------VTETPKVGTT---------------- 406
Query: 415 AANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARS---- 470
N H+ SF V+ + A
Sbjct: 407 -------EIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPS 459
Query: 471 ------TTQVYPRSWTAIYMAL-DNVGMW 492
T Q + I G +
Sbjct: 460 EKGWKDTIQAHAGEVLRIAATFGPYSGRY 488
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 73.1 bits (178), Expect = 8e-14
Identities = 42/249 (16%), Positives = 75/249 (30%), Gaps = 39/249 (15%)
Query: 53 NGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNS----WQDGVYGTT-CPIP 107
GP + D L+I N P+ I +G+ R GV PI
Sbjct: 446 ESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPIL 505
Query: 108 PGKNFTYVLQAKDQIG---------SYFYFPSF--LFHKAAGAFGGIRIWSRPRIPVPFP 156
PG+ F Y + G + +Y A+G G + I + +
Sbjct: 506 PGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGN 565
Query: 157 PPAGD--FTVLAGDWYRSNHYVLRRLLDSGHNLP------------FPDGLLINGRGWNG 202
D +L + + + L + P ING ++
Sbjct: 566 QIMSDKRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLEDPEFQASNIMHSINGYVFDS 625
Query: 203 YTFTVEPGRTYRFRISNVGL-TTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTY 261
+V + I ++G T ++ G++ K V T L +
Sbjct: 626 LQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHKMVY-EDT-------LTLFPFSGE 677
Query: 262 SVLVTMDQA 270
+V ++M+
Sbjct: 678 TVFMSMENP 686
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 64.7 bits (156), Expect = 4e-11
Identities = 37/242 (15%), Positives = 71/242 (29%), Gaps = 36/242 (14%)
Query: 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNS----WQDGVYGTT---CPIPP 108
GP I A D ++I++ N P + G+ + S + D + P
Sbjct: 72 LLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVFP 131
Query: 109 GKNFTYVLQAKDQIG---------SYFYFP--SFLFHKAAGAFGGIRIWSRPRIPVPFPP 157
G + TYV Q + G +Y Y + +G G + + R
Sbjct: 132 GGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLV-CREGSLAKEKT 190
Query: 158 PAGDFTVL-------AGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW-NGYTFTVEP 209
+L W+ L + D+ +P +NG +
Sbjct: 191 QTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPGLIGCH 250
Query: 210 GRTYRFR-ISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMD 268
++ + I + ++GH+ V A+L+I + +
Sbjct: 251 RKSVYWHVIGMGTTPEVHSIFLEGHTF---LVRNHRQ-----ASLEISPITFLTAQTLLM 302
Query: 269 QA 270
Sbjct: 303 DL 304
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 67.5 bits (164), Expect = 2e-12
Identities = 28/234 (11%), Positives = 64/234 (27%), Gaps = 36/234 (15%)
Query: 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNS----WQDGVYG---TTCPIPP 108
GP + A D + + N +P I G++ + S + D + P
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 109 GKNFTYVLQAKDQIGS---------YFYFP--SFLFHKAAGAFGGIRIWSRPRI-PVPFP 156
G+ +TY + G + Y+ + + +G G + I + +
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQ 176
Query: 157 PPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFR 216
VL + + S + + TV +
Sbjct: 177 KMFEKQHVLMFAVFDESK--------SWNQTSSLMYTVNGYVNGTMPDITVCAHDHISWH 228
Query: 217 ISNVGLT-TSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ 269
+ + + G +E +A+ + + + +T+
Sbjct: 229 LIGMSSGPELFSIHFNGQV---LEQNHHKI-----SAITLVSATSTTANMTVSP 274
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 59.8 bits (144), Expect = 1e-09
Identities = 37/220 (16%), Positives = 67/220 (30%), Gaps = 27/220 (12%)
Query: 53 NGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNS-------WQDGVYGTTCP 105
+ GP I A +D + + N P+ + +GL ++S +
Sbjct: 63 HLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDNA 122
Query: 106 IPPGKNFTYVLQAKDQIGS---------YFYFPSF--LFHKAAGAFGGIRIWSRPRIPVP 154
I P K +TYV A + G + Y+ + +G G + I + +
Sbjct: 123 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKE 182
Query: 155 FPPPAG--DFTVLA------GDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFT 206
P +F +L WY S + ING +N
Sbjct: 183 TNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPGLR 242
Query: 207 VEPGRTYRFRISNVGLTTSI-NFRIQGHSMKLVEVEGSHT 245
+ R + N+G + I G ++ +
Sbjct: 243 MYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQHQL 282
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 8e-09
Identities = 44/259 (16%), Positives = 73/259 (28%), Gaps = 35/259 (13%)
Query: 44 GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103
G + + NG PGP + ND + + + N + + ++ + G
Sbjct: 56 GTEIHAMTFNGSVPGPLMVVHENDYVELRLIN---PDTNTLLHNI--DFHAATGALGGGA 110
Query: 104 -CPIPPGKNFTYVLQAKDQIGSYFY----FPSFLFHKAAGAFGGIRIWSRPRIPVPFPPP 158
+ PG+ T +A + G + Y +H +G G I + R + P
Sbjct: 111 LTQVNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQP 169
Query: 159 AGD---FTVLAGDWY--RSNHYVLRRLLDSGHNLPF---------PDGLLINGRGWNGYT 204
+ V D+Y + ++ G P ++ NG T
Sbjct: 170 LTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAV-GALT 228
Query: 205 ----FTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAA--LDIHLG 258
T G S T + G V G I G
Sbjct: 229 GDHALTAAVGERVLVVHSQANRDTR--PHLIGGHGDYVWATGKFRNPPDLDQETWLIPGG 286
Query: 259 QTYSVLVTMDQAPQDYYIV 277
+ T Q P Y V
Sbjct: 287 TAGAAFYTFRQ-PGVYAYV 304
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 1e-08
Identities = 44/259 (16%), Positives = 78/259 (30%), Gaps = 35/259 (13%)
Query: 44 GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103
G Q + NG PGP + D + +++ N + + + + G
Sbjct: 50 GTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAM---PHNV--DFHGATGALGGAK 104
Query: 104 CP-IPPGKNFTYVLQAKDQIGSYFYFPSF----LFHKAAGAFGGIRIWSRPRIPVPFPPP 158
+ PG+ T +A + G++ Y + +H +G G + + R + P P
Sbjct: 105 LTNVNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKP 163
Query: 159 AGD---FTVLAGDWY--RSNHYVLRRLLDSGHNLPF---------PDGLLINGRGWNGYT 204
+T+ D Y + + + P ++ NG+ T
Sbjct: 164 LHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKV-GALT 222
Query: 205 ----FTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAA--LDIHLG 258
T + G T S T + G V G I G
Sbjct: 223 GANALTAKVGETVLLIHSQANRDTR--PHLIGGHGDWVWETGKFANPPQRDLETWFIRGG 280
Query: 259 QTYSVLVTMDQAPQDYYIV 277
+ L T Q P Y +
Sbjct: 281 SAGAALYTFKQ-PGVYAYL 298
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 6e-07
Identities = 74/488 (15%), Positives = 131/488 (26%), Gaps = 163/488 (33%)
Query: 2 RDSRVLCSLIALLLSLAVHGVY-----GDSP-YRFFTWKITYGDIYPLGVKQQGILINGQ 55
S L L LLS V Y+F I P + + I
Sbjct: 60 AVSGTL-RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI----- 113
Query: 56 FPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYGTT-CPIPPGKNFT 113
Q D + NDN + + YN R +P+L L + R + + G GK
Sbjct: 114 ---EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS----GKT-- 164
Query: 114 YVLQAK----DQIGSYFYFPSF-------------------LFHKAAGAFGGIRIWSRPR 150
+ ++ F F L ++ + SR
Sbjct: 165 -WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT-----SRSD 218
Query: 151 IPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLI-----NGRGWNGYTF 205
LRRLL + P+ + LL+ N + WN +
Sbjct: 219 HSSNIKLRIHSIQ-----------AELRRLL---KSKPYENCLLVLLNVQNAKAWNAFNL 264
Query: 206 T----VEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTY 261
+ + T R +T ++ H + L + T + L +L
Sbjct: 265 SCKILL----TTR----FKQVTDFLSAATTTH-ISLDHHSMTLTPDEVKSLLLKYLDCRP 315
Query: 262 SVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQA 321
L PR + TT S I +
Sbjct: 316 QDL-------------------PREVLTTNPRRLS-----------------IIAESIRD 339
Query: 322 RSIRWNLTASGPRPNPQGSY-HYGMIKISRTI--TLANSAPYMNGKQRY---AINSVSFV 375
W+ ++ H K++ I +L P ++ + ++ F
Sbjct: 340 GLATWD------------NWKHVNCDKLTTIIESSLNVLEPA-EYRKMFDRLSV----F- 381
Query: 376 PADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVE--IVFQNWEDTV 433
P IP + L + W + ++ N + + +V + +++
Sbjct: 382 PPSA--------HIPTI-LLSLI-----WFDVIKSDVMVVVN--KLHKYSLVEKQPKEST 425
Query: 434 QSYHIDGY 441
S Y
Sbjct: 426 ISIP-SIY 432
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 4e-06
Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 37/201 (18%)
Query: 49 GILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPP 108
G+L GP I A DN++++ N P+ + + + G + P
Sbjct: 195 GLL------GPYIRAEVEDNIMVTFRNQASRPYSFYSSLISY-EEDQRQGAEPRKNFVKP 247
Query: 109 GKNFTYVLQAKDQIG---------SYFYFPS--FLFHKAAGAFGGIRIWSRPRIPVPFPP 157
+ TY + + + ++ Y +G G + + +
Sbjct: 248 NETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGR 307
Query: 158 PAGD------FTVLAGD--WYRSNHYVLRRLLDSGHNLPFPDGLL--------INGRGW- 200
FT+ WY + + + R + N+ D ING
Sbjct: 308 QVTVQEFALFFTIFDETKSWYFTEN--MERNCRAPCNIQMEDPTFKENYRFHAINGYIMD 365
Query: 201 NGYTFTVEPGRTYRFRISNVG 221
+ + R+ + ++G
Sbjct: 366 TLPGLVMAQDQRIRWYLLSMG 386
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 45/260 (17%), Positives = 72/260 (27%), Gaps = 36/260 (13%)
Query: 44 GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103
Q + +G PGP + D + +++ N P + + + + G
Sbjct: 49 DAYLQAMTFDGSIPGPLMIVHEGDYVELTLIN---PPENTMPHNIDFH--AATGALGGGG 103
Query: 104 CP-IPPGKNFTYVLQAKDQIGSYFY-----FPSFLFHKAAGAFGGIRIWSR-PRIPVPFP 156
I PG+ +A + G++ Y P +H +G G I + R
Sbjct: 104 LTLINPGEKVVLRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGK 162
Query: 157 PPAGDF--TVLAGDWY--RSNHYVLRRLLDSGHNLPF---------PDGLLINGRGWNGY 203
P D + D Y + R D P ++ NG
Sbjct: 163 PVRYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAV-GAL 221
Query: 204 T----FTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAA--LDIHL 257
T + G F S + + G LV G I
Sbjct: 222 TGEGALKAKVGDNVLFVHSQPNRDSR--PHLIGGHGDLVWETGKFHNAPERDLETWFIRG 279
Query: 258 GQTYSVLVTMDQAPQDYYIV 277
G + L Q P Y V
Sbjct: 280 GTAGAALYKFLQ-PGVYAYV 298
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 543 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 100.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 100.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 100.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 100.0 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 100.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 100.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 100.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 100.0 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 100.0 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 100.0 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 100.0 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 100.0 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 100.0 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 100.0 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 100.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 100.0 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 100.0 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 100.0 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 100.0 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 100.0 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 100.0 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 100.0 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 100.0 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 100.0 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 99.97 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 99.96 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 99.96 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.95 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 99.95 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 99.94 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 99.9 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 99.88 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.87 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 99.87 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.86 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 99.84 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.81 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 99.78 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 99.72 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 99.71 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 99.65 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 99.65 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.63 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 99.58 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 99.55 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 99.53 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 99.51 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 99.5 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 99.5 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 99.47 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 99.47 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 99.47 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 99.45 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 99.44 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.39 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 99.39 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 99.38 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.34 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 99.29 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 99.21 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 99.2 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 99.17 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.15 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 99.13 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 99.01 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.89 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.88 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.87 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 98.83 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.8 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.74 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.74 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.71 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.67 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.66 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 98.65 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.65 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.63 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 98.62 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.61 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 98.56 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.55 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.54 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.48 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 98.45 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.39 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.38 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 98.37 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 98.37 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 98.35 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 98.32 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.29 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 98.25 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 98.2 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 98.09 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 98.08 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.08 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 98.05 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 98.02 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 98.01 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 97.94 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 97.92 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.82 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 97.48 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 97.29 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 97.25 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 97.19 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 97.1 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 97.06 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 97.05 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 97.02 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 96.85 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 96.48 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 96.08 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 96.01 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 95.59 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 95.39 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 95.1 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 94.94 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 94.24 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 93.49 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 93.31 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 92.89 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 89.57 | |
| 3isy_A | 120 | Bsupi, intracellular proteinase inhibitor; intrace | 82.54 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-100 Score=830.03 Aligned_cols=492 Identities=29% Similarity=0.522 Sum_probs=392.1
Q ss_pred CCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-CC
Q 009127 26 SPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-TT 103 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-tq 103 (543)
+.+++|+|+|++..+.+||.++.+|+|||++|||+|||++||+|+|+|+|+|+ ++++|||||+++.+++++||+++ ||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 36899999999999999999999999999999999999999999999999998 99999999999999999999999 99
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHhcc
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDS 183 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 183 (543)
|+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||++++....++ .+|+|++|+|+||+++...++...+..
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999999 689999999999999999999999999986544555 457899999999999877655433332
Q ss_pred C--CCCCCCCeEEEcCCCCC------------------------cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEE
Q 009127 184 G--HNLPFPDGLLINGRGWN------------------------GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKL 237 (543)
Q Consensus 184 g--~~~~~~~~~liNG~~~~------------------------~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~v 237 (543)
. .....++.++|||+... .+.++|++|++|||||||+|..+.+.|+|+||+|+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v 238 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238 (552)
T ss_dssp SSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE
T ss_pred ccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE
Confidence 1 11235789999999831 017999999999999999999999999999999999
Q ss_pred EEEcCccccccccCeEEEcCCCeEEEEEEe-CCCCcceEEEEeeccC-CCccceEEEEEecCCCCC--CCCCCCCCCC-C
Q 009127 238 VEVEGSHTLQNTYAALDIHLGQTYSVLVTM-DQAPQDYYIVVSSRFT-PRVLTTTAILHYSNSRRG--VSGPIPGGPT-T 312 (543)
Q Consensus 238 ia~DG~~~~p~~~~~v~l~pgeR~dv~v~~-~~~~g~y~i~~~~~~~-~~~~~~~~il~y~~~~~~--~~~~~p~~p~-~ 312 (543)
|++||.+++|+.++++.|+|||||||+|++ ++.+|+|||++....+ .......|+|+|.++... +..+.|..|. .
T Consensus 239 i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~ 318 (552)
T 1aoz_A 239 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWD 318 (552)
T ss_dssp EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTT
T ss_pred EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccc
Confidence 999999999999999999999999999999 4568999999987543 234568899999876531 1111222221 1
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcc
Q 009127 313 EIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGV 392 (543)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~ 392 (543)
+...... ..+. .+....+.+.| ...++++.+.......++...|+|||++|..+..|+|.+.+.++++.
T Consensus 319 ~~~~~~~--~~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~ 387 (552)
T 1aoz_A 319 DFDRSKN--FTYR-ITAAMGSPKPP--------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHA 387 (552)
T ss_dssp CHHHHHH--HHTT-CCBCTTCCCCC--------SSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTS
T ss_pred ccccccc--cccc-ccccCCCCCCC--------CCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccc
Confidence 1000000 0000 01100011111 24567776654322234567899999999988999998776666665
Q ss_pred cccCCCCCC-----------CCCCCCccceeEEecCCCcEEEEEEEeCCC------CCCCeeecCCCeEEEeecCCCCCC
Q 009127 393 FTLGSMPTS-----------PNWGNAYLQTSVMAANFREFVEIVFQNWED------TVQSYHIDGYSFFVVGMDGGQWTP 455 (543)
Q Consensus 393 ~~~~~~~~~-----------p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~------~~HP~HlHG~~F~Vl~~~~g~~~~ 455 (543)
|..+ .+.. +.....+.++.++.++.|++|+|+|+|.+. +.||||||||+||||+++.|.|++
T Consensus 388 ~~~~-~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~ 466 (552)
T 1aoz_A 388 FDQN-PPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA 466 (552)
T ss_dssp SCCS-CCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCG
T ss_pred cccC-CCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCc
Confidence 5432 1110 111233456778899999999999999874 469999999999999999888876
Q ss_pred CCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCcchhcccc
Q 009127 456 ASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRA 535 (543)
Q Consensus 456 ~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~ 535 (543)
.....+|+.+|.|||||.|++++|++|||++||||.|+|||||++|++.|||+.|.|... .+.++|+++++||.+
T Consensus 467 ~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C~~~ 541 (552)
T 1aoz_A 467 EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGT 541 (552)
T ss_dssp GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHH
T ss_pred ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhhhcc
Confidence 445578899999999999999999999999999999999999999999999999987543 245689999999987
Q ss_pred C
Q 009127 536 R 536 (543)
Q Consensus 536 ~ 536 (543)
+
T Consensus 542 ~ 542 (552)
T 1aoz_A 542 A 542 (552)
T ss_dssp H
T ss_pred C
Confidence 6
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-96 Score=793.56 Aligned_cols=469 Identities=24% Similarity=0.349 Sum_probs=372.5
Q ss_pred CCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-CC
Q 009127 26 SPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-TT 103 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-tq 103 (543)
+.+++|+|+|+++.+.+||+++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+++ ||
T Consensus 65 ~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq 144 (580)
T 3sqr_A 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144 (580)
T ss_dssp CCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcccc
Confidence 35799999999999999999999999999999999999999999999999998 89999999999999999999999 99
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCce-EEEeeeeeeccHHHHHHHhc
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDF-TVLAGDWYRSNHYVLRRLLD 182 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~~ 182 (543)
|+|+||++|+|+|++. ++||||||||.+.|+.+||+|+|||+++.. . .+|.|. +|+|+||+++...++.....
T Consensus 145 ~pI~PG~sftY~f~~~-q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~---~yD~d~~~l~l~Dw~~~~~~~~~~~~~ 218 (580)
T 3sqr_A 145 CPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIINGPAT--A---DYDEDVGVIFLQDWAHESVFEIWDTAR 218 (580)
T ss_dssp CCBCTTCEEEEEEECC-CCEEEEEEECSTTGGGGTCEEEEEEECCCS--S---CCSEEEEEEEEEEECSSCHHHHHHHHT
T ss_pred CCCCCCCeEEEEEECC-CCcceEEeecccccccCcCEEEEEeeCccc--C---CCCccceEEEEEEEecCCHHHHHHHHh
Confidence 9999999999999995 899999999999999999999999998754 2 348887 99999999998777654443
Q ss_pred cCCCCCCCCeEEEcCCCC---------------CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccc
Q 009127 183 SGHNLPFPDGLLINGRGW---------------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQ 247 (543)
Q Consensus 183 ~g~~~~~~~~~liNG~~~---------------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p 247 (543)
.+ ..+.+++++|||+.. ..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 219 ~~-~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P 297 (580)
T 3sqr_A 219 LG-APPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297 (580)
T ss_dssp TS-CCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEE
T ss_pred cc-CCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCc
Confidence 32 356789999999974 13789999999999999999999999999999999999999999999
Q ss_pred cccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccC----CCccceEEEEEecCCCCCCCCCCCCCCC-Ccccccccccc
Q 009127 248 NTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFT----PRVLTTTAILHYSNSRRGVSGPIPGGPT-TEIAWSLNQAR 322 (543)
Q Consensus 248 ~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~----~~~~~~~~il~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~ 322 (543)
+.+++|.|+|||||||+|++++.+|+|||++..... ......+|||+|.++.... |..+. ......+..
T Consensus 298 ~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~----P~~~~~~~~~~~~~~-- 371 (580)
T 3sqr_A 298 YTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIAN----PTSVGTTPRGTCEDE-- 371 (580)
T ss_dssp EEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCC----CCCCCCCCCCCSCCS--
T ss_pred eEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCC----CCCCCCCccchhhcc--
Confidence 999999999999999999999888999999976431 1224689999998764221 11110 000000100
Q ss_pred ccccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeec-CCCCchhhhcccCCCcccccCCCCCC
Q 009127 323 SIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFV-PADTPLKLADYFKIPGVFTLGSMPTS 401 (543)
Q Consensus 323 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~-~~~~p~~~~~~~~~~~~~~~~~~~~~ 401 (543)
....|.+..+.+.|. ..+.++.+.. ..++...|+|||++|. +++.|+|++.+.+. ...
T Consensus 372 -~~~~L~P~~~~~~~~--------~~~~~~~l~~---~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~---------~~~ 430 (580)
T 3sqr_A 372 -PVASLVPHLALDVGG--------YSLVDEQVSS---AFTNYFTWTINSSSLLLDWSSPTTLKIFNNE---------TIF 430 (580)
T ss_dssp -CGGGCCBSSCCBCCS--------EEEEEEEEEE---EESSSEEEEETTBCCCCCTTSCHHHHHHTTC---------CCC
T ss_pred -cccccccCCCCCCCC--------ccceEEEEEe---ccCCceeEEECCEecccCCCCCchhhhhcCC---------ccC
Confidence 001233222222221 2233333332 1345678999999997 57889886543210 111
Q ss_pred CCCCCCccceeEEec----CCCcEEEEEEEeCC--CCCCCeeecCCCeEEEeecCCCCCCCC-CCCCCCCCCCcceeEEe
Q 009127 402 PNWGNAYLQTSVMAA----NFREFVEIVFQNWE--DTVQSYHIDGYSFFVVGMDGGQWTPAS-RTRYNLRDTVARSTTQV 474 (543)
Q Consensus 402 p~~~~~~~~~~~~~~----~~g~~v~~~i~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~-~~~~~~~~p~~rDTv~v 474 (543)
|. ..+++.+ +.|++|||+|+|.+ .+.||||||||+|+||++|.|.|++.. ...+|+.+|++|||+.|
T Consensus 431 ~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v 504 (580)
T 3sqr_A 431 PT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAAL 504 (580)
T ss_dssp CG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEE
T ss_pred CC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEe
Confidence 21 2344444 46999999999987 789999999999999999999998653 35789999999999999
Q ss_pred CCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCc-chhccccC
Q 009127 475 YPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKN-ALLCGRAR 536 (543)
Q Consensus 475 p~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~-~~~c~~~~ 536 (543)
+++||++|||++||||.|+|||||++|++.||++.|.+...+ . ....++|++ ...|..|.
T Consensus 505 ~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~-i-~~~~~~~~~~~~~C~~~~ 565 (580)
T 3sqr_A 505 PGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSS-I-AVKMTDTAIFEDTCANWN 565 (580)
T ss_dssp CTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGGG-C-CCCHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHH-H-hhccCCcHHHHHhhHHHh
Confidence 999999999999999999999999999999999999775433 2 122235555 45897764
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-95 Score=787.32 Aligned_cols=473 Identities=23% Similarity=0.325 Sum_probs=371.0
Q ss_pred CeEEEEEEEEEEEecCCC-eeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-CC
Q 009127 27 PYRFFTWKITYGDIYPLG-VKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-TT 103 (543)
Q Consensus 27 ~~~~~~l~~~~~~~~~~g-~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-tq 103 (543)
++++|+|+|++..+++|| .++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+++ ||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999999 99999999999998899999999 99
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHH-hc
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL-LD 182 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~-~~ 182 (543)
|+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.. |+ .+|+|++|+|+||+++...++... +.
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999976899999999999999999999999999753 33 558999999999999988776432 22
Q ss_pred c---CCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCC
Q 009127 183 S---GHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQ 259 (543)
Q Consensus 183 ~---g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pge 259 (543)
. ....+.++.+||||+. .+.++|++||+|||||||+|+.+.+.|+|+||+|+||++||.+++|+.++++.|+|||
T Consensus 157 ~~~~~g~~~~~d~~liNG~~--~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gq 234 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTM--NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQ 234 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBS--SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTC
T ss_pred cccCCCCCCCCceEEECCCC--ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccc
Confidence 1 2234578999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCC-CcceEEEEeeccC-------CCccceEEEEEecCCCCCCCCCCCCCCC-CccccccccccccccccCC
Q 009127 260 TYSVLVTMDQA-PQDYYIVVSSRFT-------PRVLTTTAILHYSNSRRGVSGPIPGGPT-TEIAWSLNQARSIRWNLTA 330 (543)
Q Consensus 260 R~dv~v~~~~~-~g~y~i~~~~~~~-------~~~~~~~~il~y~~~~~~~~~~~p~~p~-~~~~~~~~~~~~~~~~l~~ 330 (543)
||||+|++++. .++|||++..... .......++|+|.++... |..+. ......+.+ ..+.+
T Consensus 235 R~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~~~~~~~~~~~-----~~l~p 304 (534)
T 1zpu_A 235 RYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVDSIDNFLDD-----FYLQP 304 (534)
T ss_dssp EEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CCCCCCSCSSCSCCG-----GGCCB
T ss_pred eEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CCCCccccccccccc-----cccee
Confidence 99999999864 4789999875421 113467899999876421 11100 000000111 11221
Q ss_pred CCCCCCCCCCCCcccccceEEEEEeccCC-CcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCcc
Q 009127 331 SGPRPNPQGSYHYGMIKISRTITLANSAP-YMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYL 409 (543)
Q Consensus 331 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 409 (543)
....+.+ ...++++.+..... ..++...|.|||++|..+..|++++.+.. +.+. ..+.. ...
T Consensus 305 ~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~-----~~~~~--~~~ 367 (534)
T 1zpu_A 305 YEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQA-----NNSEI--YGS 367 (534)
T ss_dssp SSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGT-----TCGGG--GCS
T ss_pred CCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--Cccc-----CCCcc--cCC
Confidence 1111111 13456666544221 12455679999999998899988654321 1111 01110 112
Q ss_pred ceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCC----------CCCCCCCCCCCCCCCCcceeEEeCCCCE
Q 009127 410 QTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGG----------QWTPASRTRYNLRDTVARSTTQVYPRSW 479 (543)
Q Consensus 410 ~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g----------~~~~~~~~~~~~~~p~~rDTv~vp~~g~ 479 (543)
++..+.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++.....+ ..+|.|||||.|++++|
T Consensus 368 ~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~~RDTv~V~pgg~ 446 (534)
T 1zpu_A 368 NTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPMRRDTLYVRPQSN 446 (534)
T ss_dssp SSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCEEESEEEECTTCE
T ss_pred CceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCCeeeEEEeCCCCE
Confidence 356788999999999999999899999999999999999864 3443322222 46899999999999999
Q ss_pred EEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCc--CCCCCc-chhcccc
Q 009127 480 TAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDE--LPIPKN-ALLCGRA 535 (543)
Q Consensus 480 v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~--~~~p~~-~~~c~~~ 535 (543)
++|||++||||.|+|||||++|++.|||+.|.|...+ . ... .++|++ .+.|..+
T Consensus 447 v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~-~-~~~~~~~~p~~~~~~C~~~ 503 (534)
T 1zpu_A 447 FVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFG-I-QDAHSQQLSENHLEVCQSC 503 (534)
T ss_dssp EEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH-H-HHCGGGSCCHHHHHHHHHT
T ss_pred EEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccc-c-ccccccCCChhHhhhhhcc
Confidence 9999999999999999999999999999999875432 2 122 455655 4566554
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-95 Score=786.19 Aligned_cols=475 Identities=23% Similarity=0.319 Sum_probs=367.0
Q ss_pred CCCeEEEEEEEEEEEecCCCe-eEEEEEECCcCCCceEEEecCCEEEEEEEECCC-----CCceeecCcccCCCCCCCCC
Q 009127 25 DSPYRFFTWKITYGDIYPLGV-KQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-----EPFLISWNGLQQRRNSWQDG 98 (543)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~g~-~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-----~~~~iH~HG~~~~~~~~~DG 98 (543)
.+.+.+|+|++++..+.+||+ ++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 345568999999999999999 999999999999999999999999999999999 99999999999988899999
Q ss_pred CCC-CCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCC-CCCCCCCCCceEEEeeeeeeccHHH
Q 009127 99 VYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRI-PVPFPPPAGDFTVLAGDWYRSNHYV 176 (543)
Q Consensus 99 ~p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~ 176 (543)
+++ |||+|+||++|+|+|++.+++||||||||.+.|+.+||+|+|||+++.+. +.+|+..++|++|+++||+++...+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 999 99999999999999997678999999999999999999999999987531 1234333469999999999987665
Q ss_pred HHHHhccCCCCCCCCeEEEcCCCC--------CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcccccc
Q 009127 177 LRRLLDSGHNLPFPDGLLINGRGW--------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQN 248 (543)
Q Consensus 177 ~~~~~~~g~~~~~~~~~liNG~~~--------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~ 248 (543)
+.. ..+...+.++.++|||+.. ..+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+
T Consensus 180 ~~~--~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~ 257 (521)
T 1v10_A 180 LFP--NPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPL 257 (521)
T ss_dssp --------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEE
T ss_pred Hhh--ccCCCCCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccce
Confidence 431 1222345689999999983 018999999999999999999999999999999999999999999999
Q ss_pred ccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCC---ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccc
Q 009127 249 TYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPR---VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIR 325 (543)
Q Consensus 249 ~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~ 325 (543)
.++++.|+|||||||+|++++.+|+|||++....... .....++|+|.++....+...+. +.. .+..
T Consensus 258 ~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~~----~~~~----- 327 (521)
T 1v10_A 258 TVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SGT----ALNE----- 327 (521)
T ss_dssp EESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CSC----BCCG-----
T ss_pred eeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-ccc----ccch-----
Confidence 9999999999999999999977899999997653211 12346999998765321111000 000 1110
Q ss_pred cccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCC
Q 009127 326 WNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWG 405 (543)
Q Consensus 326 ~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~ 405 (543)
.++.+....+.|.... ....++++.+... ..+....|+|||++|..+..|++++.+.+ .... .
T Consensus 328 ~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~--~~~~~~~~~iNg~~~~~~~~P~l~~~~~g---~~~~---------~ 390 (521)
T 1v10_A 328 ANLIPLINPGAPGNPV---PGGADINLNLRIG--RNATTADFTINGAPFIPPTVPVLLQILSG---VTNP---------N 390 (521)
T ss_dssp GGCCBSSCCCCSSCSS---TTCSSEEEECCEE--CCSSSSCCEESSCCCCCCSSCHHHHHHHT---CCCG---------G
T ss_pred hhcccCCcccCCCccc---CCcceEEEEEEEe--cCCceeEEEECCCcccCCCCchhhhhhcC---Cccc---------c
Confidence 1122221111221100 0123455554321 11122369999999988888887654321 1100 0
Q ss_pred CCccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEe-CCCCEEEEEE
Q 009127 406 NAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQV-YPRSWTAIYM 484 (543)
Q Consensus 406 ~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~v-p~~g~v~irf 484 (543)
..+.+..++.++.|++++|+++| .+.||||||||+||||+++++. .+++.+|.|||||.| ++++|++|||
T Consensus 391 ~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~gg~v~Irf 461 (521)
T 1v10_A 391 DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRF 461 (521)
T ss_dssp GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEE
T ss_pred cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCCCcEEEEEE
Confidence 11124567889999999999999 7899999999999999998652 357788999999999 8999999999
Q ss_pred EecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCC-cchhccccCCCC
Q 009127 485 ALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPK-NALLCGRARGRH 539 (543)
Q Consensus 485 ~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~-~~~~c~~~~~~~ 539 (543)
++||||.|+|||||++|++.|||+.|.|...+. ....++|+ ..+.|..|....
T Consensus 462 ~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 462 VTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNI--PIANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp ECCSCEEEEEEESCHHHHTTTCEEEEEESGGGH--HHHSCCCHHHHTHHHHHTTCC
T ss_pred EeCCCeeEEEeeChHHHHhCCCeEEEEECCcch--hhccCCChHHhhhchhhhccC
Confidence 999999999999999999999999998865442 22345564 578999998764
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-95 Score=772.95 Aligned_cols=468 Identities=23% Similarity=0.357 Sum_probs=362.1
Q ss_pred EEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCC-----CceeecCcccCCCCCCCCCCCC-C
Q 009127 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLRE-----PFLISWNGLQQRRNSWQDGVYG-T 102 (543)
Q Consensus 29 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~-----~~~iH~HG~~~~~~~~~DG~p~-t 102 (543)
..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++++++++||+++ |
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999999999999999 9
Q ss_pred CCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCC-CCCCCCCCCceEEEeeeeeeccHHHHHHHh
Q 009127 103 TCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRI-PVPFPPPAGDFTVLAGDWYRSNHYVLRRLL 181 (543)
Q Consensus 103 q~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 181 (543)
||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999778999999999999999999999999986541 12343335678999999999865432
Q ss_pred ccCCCCCCCCeEEEcCCCC--------CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeE
Q 009127 182 DSGHNLPFPDGLLINGRGW--------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAAL 253 (543)
Q Consensus 182 ~~g~~~~~~~~~liNG~~~--------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v 253 (543)
.+..+..+++++|||++. ..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++++
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l 239 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEI 239 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeE
Confidence 122234789999999862 24789999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCeEEEEEEeCCCCcceEEEEeeccCCC---ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCC
Q 009127 254 DIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPR---VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTA 330 (543)
Q Consensus 254 ~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~ 330 (543)
.|+|||||||+|++++.+|+|||++....... .....|+|+|.++....+ ....+..... .+. +.+|.+
T Consensus 240 ~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p--~~~~~~~~~~-~~~-----~~~L~p 311 (495)
T 3t6v_A 240 QIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADP--VTVASTVHTK-CLI-----ETDLHP 311 (495)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCC--CCCCCSSCSS-BCC-----GGGCCB
T ss_pred EEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCC--CCCCCCCCcc-ccc-----cccccc
Confidence 99999999999999987899999997643221 124579999987643211 1111100000 010 112222
Q ss_pred CCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccc
Q 009127 331 SGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQ 410 (543)
Q Consensus 331 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 410 (543)
....+.|... . ...+++++.+... .++ ..|+|||++|..++.|+|++.+. +.+... .....
T Consensus 312 ~~~~~~p~~~-~--~~~~d~~~~l~~~---~~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~~---------~~~~~ 372 (495)
T 3t6v_A 312 LSRNGVPGNP-H--QGGADCNLNLSLG---FAC-GNFVINGVSFTPPTVPVLLQICS---GANTAA---------DLLPS 372 (495)
T ss_dssp SSCCCCSSCS-S--TTCSSEEEECCEE---EET-TEEEETTBCCCCCSSCHHHHHHT---TCCSST---------TSSST
T ss_pred cccccCCCcc-C--CCCCcEEEEEEEE---ecC-cEEEEcCEecCCCCCcchhhhhc---CCcCcc---------cccCC
Confidence 2111111100 0 1134555554431 112 26999999999889998876532 111100 01112
Q ss_pred eeEEecCCCcEEEEEEE-eCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCC-CCEEEEEEEecC
Q 009127 411 TSVMAANFREFVEIVFQ-NWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYP-RSWTAIYMALDN 488 (543)
Q Consensus 411 ~~~~~~~~g~~v~~~i~-N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~-~g~v~irf~adn 488 (543)
..++.++.|++|+|+|+ |...+.||||||||+|+||++++. ..+|+.+|.||||+.|++ ++|++|||++||
T Consensus 373 ~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~irf~adn 445 (495)
T 3t6v_A 373 GSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTIRFCTDN 445 (495)
T ss_dssp TSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEEEEECCS
T ss_pred cceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEEEEEcCC
Confidence 45788999999999998 677789999999999999987532 247888999999999997 899999999999
Q ss_pred cccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCc-chhccccCC
Q 009127 489 VGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKN-ALLCGRARG 537 (543)
Q Consensus 489 pG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~-~~~c~~~~~ 537 (543)
||.|+|||||++|++.|||+.|. +.|++. ....++|++ ...|..|..
T Consensus 446 PG~W~~HCHi~~H~~~Gm~~~~~-e~~~~~-~~~~~~p~~~~~~C~~~~~ 493 (495)
T 3t6v_A 446 PGPWFLHCHIDWHLDAGFAIVFA-EDIPNT-ASANPVPEAWSNLCPSYDS 493 (495)
T ss_dssp CEEEEEEESCHHHHHTTCEEEEE-ETHHHH-HHHCCCCHHHHHHHHHHHH
T ss_pred CeeEEEEecchhHhhcCCeEEEE-EChhHh-ccccCCCHHHHHHhhHhhc
Confidence 99999999999999999999995 444432 122345655 568987653
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-94 Score=766.94 Aligned_cols=468 Identities=24% Similarity=0.390 Sum_probs=363.7
Q ss_pred EEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCC-----CceeecCcccCCCCCCCCCCCC-C
Q 009127 29 RFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLRE-----PFLISWNGLQQRRNSWQDGVYG-T 102 (543)
Q Consensus 29 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~-----~~~iH~HG~~~~~~~~~DG~p~-t 102 (543)
..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++++++++||+++ |
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999999999999999 9
Q ss_pred CCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCC-CCCCCCCCCceEEEeeeeeeccHHHHHHHh
Q 009127 103 TCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRI-PVPFPPPAGDFTVLAGDWYRSNHYVLRRLL 181 (543)
Q Consensus 103 q~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 181 (543)
||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999778999999999999999999999999986541 1234333567899999999975432
Q ss_pred ccCCCCCCCCeEEEcCCCC-------CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEE
Q 009127 182 DSGHNLPFPDGLLINGRGW-------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALD 254 (543)
Q Consensus 182 ~~g~~~~~~~~~liNG~~~-------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~ 254 (543)
.+..+..+++++|||++. ..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++++.
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~ 237 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQ 237 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEE
Confidence 122334789999999963 257899999999999999999999999999999999999999999999999999
Q ss_pred EcCCCeEEEEEEeCCCCcceEEEEeeccCCC---ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCC
Q 009127 255 IHLGQTYSVLVTMDQAPQDYYIVVSSRFTPR---VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTAS 331 (543)
Q Consensus 255 l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~ 331 (543)
|+|||||||+|++++.+|+|||++....... .....|+|+|.++....+.. +..+ .. . .+. +.+|.+.
T Consensus 238 i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~-~~~~-~~-~-~~~-----~~~L~p~ 308 (499)
T 3pxl_A 238 IFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTT-NQTT-SV-K-PLN-----EVDLHPL 308 (499)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCC-CCCC-CS-S-BCC-----GGGCCBS
T ss_pred ECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCC-CCCC-CC-c-ccc-----ccccccc
Confidence 9999999999999987899999997643221 12457999998764321110 0000 00 0 010 1122222
Q ss_pred CCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccce
Q 009127 332 GPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQT 411 (543)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 411 (543)
...+.|... ....+++++.+... .++ ..|+|||++|..++.|+|++.+.+ ..... ......
T Consensus 309 ~~~~~p~~~---~~~~~d~~~~l~~~---~~~-~~w~iNg~s~~~~~~P~L~~~~~g---~~~~~---------~~~~~~ 369 (499)
T 3pxl_A 309 VSTPVPGAP---SSGGVDKAINMAFN---FNG-SNFFINGASFVPPTVPVLLQILSG---AQTAQ---------DLLPSG 369 (499)
T ss_dssp SCCCCSSCS---STTCSSEEEECCEE---ECS-SCEEETTBCCCCCSSCHHHHHHTT---CCSTT---------TSSSTT
T ss_pred ccccCCCcc---cCCCCcEEEEEEEE---ecC-cEEEEcCEecCCCCCchhhhhhcC---Ccccc---------ccCCCc
Confidence 211111100 01134566655432 122 269999999998899988765421 11100 011124
Q ss_pred eEEecCCCcEEEEEEE---eCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCC---CCEEEEEEE
Q 009127 412 SVMAANFREFVEIVFQ---NWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYP---RSWTAIYMA 485 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~---N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~---~g~v~irf~ 485 (543)
.++.++.|++|+|+|+ |...+.||||||||+|+||+.++. ..+|+.+|.+|||+.|++ ++|++|||+
T Consensus 370 ~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g~-------~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ 442 (499)
T 3pxl_A 370 SVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGS-------TVYNYDNPIFRDVVSTGTPAAGDNVTIRFD 442 (499)
T ss_dssp SEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCCGGGTCEEEEEEE
T ss_pred eeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccCC-------cccccCCCCccceEEcCCcCCCcEEEEEEE
Confidence 5788999999999999 566788999999999999987531 247888999999999997 999999999
Q ss_pred ecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCc-chhccccCCCC
Q 009127 486 LDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKN-ALLCGRARGRH 539 (543)
Q Consensus 486 adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~-~~~c~~~~~~~ 539 (543)
+||||.|+|||||++|++.|||+.| ++.+++. ....++|++ ...|..|...+
T Consensus 443 adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~-~~~~~~p~~~~~~C~~~~~~~ 495 (499)
T 3pxl_A 443 TNNPGPWFLHCHIDFHLEGGFAVVM-AEDTPDV-KAVNPVPQAWSDLCPTYDALD 495 (499)
T ss_dssp CCSCEEEEEEESSHHHHHTTCEEEE-EESGGGH-HHHSCCCHHHHTHHHHHHTSC
T ss_pred cCCCceEEEEeCChhHhhCCCcEEE-EEChhHh-ccccCCCHHHHHhhhHhhccC
Confidence 9999999999999999999999999 4555532 222345655 56998886654
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-93 Score=763.56 Aligned_cols=464 Identities=26% Similarity=0.404 Sum_probs=361.6
Q ss_pred EEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-----CCceeecCcccCCCCCCCCCCCC-CC
Q 009127 30 FFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-----EPFLISWNGLQQRRNSWQDGVYG-TT 103 (543)
Q Consensus 30 ~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-----~~~~iH~HG~~~~~~~~~DG~p~-tq 103 (543)
+|+|++++..+.+||+++.+|+|||++ ||+|||++||+|+|+|+|+|+ ++++|||||+++.+++++||+++ +|
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 699999999999999999999999999 999999999999999999999 99999999999988899999999 99
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCC-CCCCCCCCCceEEEeeeeeeccHHHHHHHhc
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRI-PVPFPPPAGDFTVLAGDWYRSNHYVLRRLLD 182 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~ 182 (543)
|+|+||++|+|+|++.+++||||||||.+.|+.+||+|+|||+++.+. +.+|...++|++|+++||+++...++.
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~---- 160 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ---- 160 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc----
Confidence 999999999999997678999999999999999999999999987531 223433346999999999998765432
Q ss_pred cCCCCCCCCeEEEcCCCC-------CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEE
Q 009127 183 SGHNLPFPDGLLINGRGW-------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDI 255 (543)
Q Consensus 183 ~g~~~~~~~~~liNG~~~-------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l 255 (543)
..+.++.++|||+.. ..+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+.++++.|
T Consensus 161 ---~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l 237 (503)
T 1hfu_A 161 ---GAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQI 237 (503)
T ss_dssp ------CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEE
T ss_pred ---CCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEE
Confidence 114689999999982 1189999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCCCcceEEEEeeccCCC-------ccceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccccc
Q 009127 256 HLGQTYSVLVTMDQAPQDYYIVVSSRFTPR-------VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNL 328 (543)
Q Consensus 256 ~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-------~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l 328 (543)
+|||||||+|++++.+|+|||++....... .....++|+|.++....+.. +..|. . ..+.. ..+
T Consensus 238 ~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~~-~--~~l~~-----~~l 308 (503)
T 1hfu_A 238 FTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANPN-P--AQLNE-----ADL 308 (503)
T ss_dssp CTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCSS-C--CBCCG-----GGC
T ss_pred cccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCCc-c--CCCcc-----ccc
Confidence 999999999999977899999997643211 12347999998765321110 00110 0 01111 112
Q ss_pred CCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCc
Q 009127 329 TASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAY 408 (543)
Q Consensus 329 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 408 (543)
.+....+.|.... ....++++.+... .++. .|+|||++|..+..|++++.+. +.+.. ...+
T Consensus 309 ~p~~~~~~p~~~~---~~~~~~~~~l~~~---~~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~---------~~~~ 369 (503)
T 1hfu_A 309 HALIDPAAPGIPT---PGAADVNLRFQLG---FSGG-RFTINGTAYESPSVPTLLQIMS---GAQSA---------NDLL 369 (503)
T ss_dssp BBSSSCSCSSCSS---TTCSSEEEECCEE---EETT-EEEETTBCCCCCSSCHHHHHHT---TCCSG---------GGSS
T ss_pred cccCccCCCCccc---CCcceEEEEEEee---ccCc-eEEECCCccCCCCCcchhhhhc---CCccc---------ccCC
Confidence 2221111121100 0123444544321 1122 7999999999888888766432 11110 0112
Q ss_pred cceeEEecCCCcEEEEEEE-eCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEe-CCCCEEEEEEEe
Q 009127 409 LQTSVMAANFREFVEIVFQ-NWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQV-YPRSWTAIYMAL 486 (543)
Q Consensus 409 ~~~~~~~~~~g~~v~~~i~-N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~v-p~~g~v~irf~a 486 (543)
.+..++.++.|+++||+++ |.+.+.||||||||+||||+++++. .+++.+|.|||||.| ++++|++|||++
T Consensus 370 ~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~a 442 (503)
T 1hfu_A 370 PAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVT 442 (503)
T ss_dssp STTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEEC
T ss_pred CCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCceEEEEEEc
Confidence 3457788999999999999 5557899999999999999998653 356788999999999 999999999999
Q ss_pred cCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCC-cchhccccCCC
Q 009127 487 DNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPK-NALLCGRARGR 538 (543)
Q Consensus 487 dnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~-~~~~c~~~~~~ 538 (543)
||||.|+|||||++|++.|||+.|.|...+. ....++|+ ..+.|+.|...
T Consensus 443 dnPG~W~~HCHil~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C~~~~~~ 493 (503)
T 1hfu_A 443 DNPGPWFFHCHIEFHLMNGLAIVFAEDMANT--VDANNPPVEWAQLCEIYDDL 493 (503)
T ss_dssp CSCEEEEEEESSHHHHHTTCEEEEEECHHHH--HHHCCCCHHHHHHHHHHHTC
T ss_pred CCCeeeeEecCchhHhhCCCeEEEEECchhh--hhccCCChHHhhhccchhhc
Confidence 9999999999999999999999998864432 12344564 47899988765
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-92 Score=767.56 Aligned_cols=479 Identities=23% Similarity=0.359 Sum_probs=368.5
Q ss_pred cCCCeEEEEEEEEEEE--ecCCCee-EEEEEECCcCCCceEEEecCCEEEEEEEECC-CCCceeecCcccCCCCCCCCCC
Q 009127 24 GDSPYRFFTWKITYGD--IYPLGVK-QQGILINGQFPGPQIDAVTNDNLIISVYNYL-REPFLISWNGLQQRRNSWQDGV 99 (543)
Q Consensus 24 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~~~DG~ 99 (543)
+.+.+++|+|++++.. +.+||+. +.+|+|||++|||+|||++||+|+|+|+|+| +++++|||||+++.+++++||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 3456899999999999 8999999 9999999999999999999999999999999 6899999999999888999999
Q ss_pred CC-CCCcCCC-CCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCce-EEEeeeeeeccHHH
Q 009127 100 YG-TTCPIPP-GKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDF-TVLAGDWYRSNHYV 176 (543)
Q Consensus 100 p~-tq~~i~P-G~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~ 176 (543)
++ +||+|+| |++|+|+|+++ ++||||||||.+.|+.+||+|+|||+++.. . .+|.|. +|+|+||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~~-q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~---~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPAS--L---PYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEECC-SCEEEEEEECSTTGGGGTCEEEEEEECCCS--S---CCSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEECC-CCEEEEEEEcccchhcCCceEEEEecCCCc--C---CCcccceEEEEeccccCCHHH
Confidence 99 9999999 99999999995 799999999999999999999999998754 2 347887 99999999998776
Q ss_pred HHHHhccCCCCCCCCeEEEcCCCCC-------cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccc
Q 009127 177 LRRLLDSGHNLPFPDGLLINGRGWN-------GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNT 249 (543)
Q Consensus 177 ~~~~~~~g~~~~~~~~~liNG~~~~-------~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~ 249 (543)
+..... ....+.++.++|||+... .+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+.
T Consensus 183 ~~~~~~-~~~~~~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~ 261 (559)
T 2q9o_A 183 LVHFTQ-NNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMT 261 (559)
T ss_dssp HHHHHT-TSCCCCBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred Hhhhhh-cCCCCccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceE
Confidence 543222 223456899999999841 368999999999999999999999999999999999999999999999
Q ss_pred cCeEEEcCCCeEEEEEEeCCCCcceEEEEee--cc---CCCccceEEEEEecCCCCCCCCCCCCCCCCcccccccccccc
Q 009127 250 YAALDIHLGQTYSVLVTMDQAPQDYYIVVSS--RF---TPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSI 324 (543)
Q Consensus 250 ~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~--~~---~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 324 (543)
++++.|+|||||||+|++++.+|+|||++.. .. ........++|+|.++....+...+... .+. ..++.
T Consensus 262 ~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~-~~~-~~~~~---- 335 (559)
T 2q9o_A 262 VDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPP-VDH-QCLDT---- 335 (559)
T ss_dssp ESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCC-CCC-TTCCC----
T ss_pred eCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcC-CCc-ccccc----
Confidence 9999999999999999999778999999976 21 1223456899999876531111110000 000 00110
Q ss_pred ccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecC-CCCchhhhcccCCCcccccCCCCCCCC
Q 009127 325 RWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVP-ADTPLKLADYFKIPGVFTLGSMPTSPN 403 (543)
Q Consensus 325 ~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~-~~~p~~~~~~~~~~~~~~~~~~~~~p~ 403 (543)
..+.+..+.+.|...+ ....++++.+.... ..++...|+|||++|.. +..|+|.+...+. ...|
T Consensus 336 -~~l~p~~~~~~p~~~~---~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~---------~~~~- 400 (559)
T 2q9o_A 336 -LDVRPVVPRSVPVNSF---VKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGN---------TSYP- 400 (559)
T ss_dssp -SCCCBSSCCBCCCTTC---CCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC---------CCCC-
T ss_pred -cccccCCCCCCCCccc---ccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCC---------ccCC-
Confidence 1122111111111110 01122344443211 12345689999999964 4678775433211 0111
Q ss_pred CCCCccceeEEecC-CCcEEEEEEEeCC----CCCCCeeecCCCeEEEeecC---------CCCCCC-CCCCCCCCCCCc
Q 009127 404 WGNAYLQTSVMAAN-FREFVEIVFQNWE----DTVQSYHIDGYSFFVVGMDG---------GQWTPA-SRTRYNLRDTVA 468 (543)
Q Consensus 404 ~~~~~~~~~~~~~~-~g~~v~~~i~N~~----~~~HP~HlHG~~F~Vl~~~~---------g~~~~~-~~~~~~~~~p~~ 468 (543)
.+.+++.++ .+++++|+|+|.+ .+.||||||||+||||+++. |.|++. +...+++.+|.|
T Consensus 401 -----~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~ 475 (559)
T 2q9o_A 401 -----VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPR 475 (559)
T ss_dssp -----GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCE
T ss_pred -----CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCc
Confidence 234566665 4689999999976 68999999999999999987 666542 124578889999
Q ss_pred ceeEEeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcCCC--CC-cchhccccCC
Q 009127 469 RSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPI--PK-NALLCGRARG 537 (543)
Q Consensus 469 rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~--p~-~~~~c~~~~~ 537 (543)
||||.|++++|++|||++||||.|||||||++|++.|||+.|.|...+ . ....++ |+ ..++|+.|..
T Consensus 476 RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~-~-~~~~~~~~p~~~~~~C~~~~~ 545 (559)
T 2q9o_A 476 RDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPAD-L-RQRISQEDEDDFNRVCDEWRA 545 (559)
T ss_dssp ESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH-H-GGGCCHHHHHHHHHHHHHHHH
T ss_pred cceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcch-h-hhccccCCchhhhhhcccccc
Confidence 999999999999999999999999999999999999999999885433 1 223333 54 4689998754
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-87 Score=704.58 Aligned_cols=400 Identities=19% Similarity=0.251 Sum_probs=324.8
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCC
Q 009127 24 GDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103 (543)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq 103 (543)
+...+++|+|+++++.+.++|+++.+|+|||++|||+|||++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---
Confidence 34567899999999999999999999999999999999999999999999999999999999999875 4899997
Q ss_pred CcCCCCCeEEEEEEeC-CCcccceecCCc----hhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHH--
Q 009127 104 CPIPPGKNFTYVLQAK-DQIGSYFYFPSF----LFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYV-- 176 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~-~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-- 176 (543)
+.|+||++|+|+|+++ +++||||||||. +.|+.+||+|+|||+++.+. .+...+++|++|+++||+++....
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~-~~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDA-IPELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGG-SHHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCcccc-CccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 6799999999999986 479999999996 57999999999999986532 111135789999999999875310
Q ss_pred --HHHHhccCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccc-cccccCeE
Q 009127 177 --LRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT-LQNTYAAL 253 (543)
Q Consensus 177 --~~~~~~~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~-~p~~~~~v 253 (543)
....+ . ...++.++|||+. .|.++|++| +|||||||+|+.+.+.|+|+||+|+||+.||.++ +|+.++++
T Consensus 166 ~~~~~~~-~---g~~~~~~~iNG~~--~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l 238 (439)
T 2xu9_A 166 HTPMDWM-N---GKEGDLVLVNGAL--RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSEL 238 (439)
T ss_dssp CCHHHHH-H---CCCCSEEEETTEE--SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCE
T ss_pred CCccccc-c---CCCCCEEEECCcc--CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceE
Confidence 00011 1 1346899999999 899999999 9999999999999999999999999999999997 89999999
Q ss_pred EEcCCCeEEEEEEeCCCCcceEEEEeeccCC------------------CccceEEEEEecCCCCCCCCCCCCCCCCccc
Q 009127 254 DIHLGQTYSVLVTMDQAPQDYYIVVSSRFTP------------------RVLTTTAILHYSNSRRGVSGPIPGGPTTEIA 315 (543)
Q Consensus 254 ~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~------------------~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~ 315 (543)
.|+|||||||+|++++ +|+|+|++...... ......++++|.++..+ .++|..
T Consensus 239 ~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~p~~------ 309 (439)
T 2xu9_A 239 LLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPLPKA------ 309 (439)
T ss_dssp EECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCCCSC------
T ss_pred EECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccCccc------
Confidence 9999999999999996 89999998643211 11246778888765421 111110
Q ss_pred cccccccccccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCccccc
Q 009127 316 WSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTL 395 (543)
Q Consensus 316 ~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~ 395 (543)
+ .+....+.+ ..++++.+.... .+ ..|.|||++|..+..+
T Consensus 310 --l----------~~~~~l~~~---------~~~r~~~l~~~~---~g-~~~~iNg~~~~~~~~~--------------- 349 (439)
T 2xu9_A 310 --L----------SPFPTLPAP---------VVTRRLVLTEDM---MA-ARFFINGQVFDHRRVD--------------- 349 (439)
T ss_dssp --C----------CCCCCCCCC---------SEEEEEEEEEEG---GG-TEEEETTBCCCTTCCC---------------
T ss_pred --C----------CCcccCCCC---------CcceEEEEEeec---cC-ceEeECCEECCCCCCc---------------
Confidence 0 000001111 123666665421 11 3699999998532111
Q ss_pred CCCCCCCCCCCCccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeC
Q 009127 396 GSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVY 475 (543)
Q Consensus 396 ~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp 475 (543)
+.++.|++++|+|+|.+.+.||||||||+||||+++++.+ .+|.|||||.|+
T Consensus 350 ------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~----------~~p~~rDTv~v~ 401 (439)
T 2xu9_A 350 ------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF----------PYRAWKDVVNLK 401 (439)
T ss_dssp ------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------SSCCCBSEEEEC
T ss_pred ------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------CCCCCeEEEEeC
Confidence 3467899999999999999999999999999999986543 368999999999
Q ss_pred CCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEe
Q 009127 476 PRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 476 ~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
++++++|||++||||.|+|||||++|||.|||+.|+|.
T Consensus 402 p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 402 AGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp TTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 99999999999999999999999999999999999984
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-86 Score=699.70 Aligned_cols=403 Identities=18% Similarity=0.175 Sum_probs=320.6
Q ss_pred CeEEEEEEEEEEEecC-CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCc
Q 009127 27 PYRFFTWKITYGDIYP-LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCP 105 (543)
Q Consensus 27 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~ 105 (543)
.+++|+|++++..+++ +|.++.+|+|||++|||+|||++||+|+|+|+|+|+++++|||||+++.+. +||++ ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 3578999999999987 899999999999999999999999999999999999999999999998764 99999 899
Q ss_pred CCCCCeEEEEEEeCCCcccceecCCc----hhhhhccceeEEEEecCCCCCCCCCC--CCCceEEEeeeeeeccHHHHHH
Q 009127 106 IPPGKNFTYVLQAKDQIGSYFYFPSF----LFHKAAGAFGGIRIWSRPRIPVPFPP--PAGDFTVLAGDWYRSNHYVLRR 179 (543)
Q Consensus 106 i~PG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 179 (543)
|+||++|+|+|++.+++||||||||. +.|+.+||+|+|||+++.+...+++. .++|++|+++||+++...++.
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~- 171 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE- 171 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE-
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee-
Confidence 99999999999996559999999997 78999999999999997643222322 478999999999997654321
Q ss_pred HhccCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEE-eCCeeEEEEEcCccc-cccccCeEEEcC
Q 009127 180 LLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRI-QGHSMKLVEVEGSHT-LQNTYAALDIHL 257 (543)
Q Consensus 180 ~~~~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i-~g~~~~via~DG~~~-~p~~~~~v~l~p 257 (543)
+...+.....++.++|||+. .|.++|++| +|||||||+|+.+.+.|+| +||+|+||++||+++ +|..++++.|+|
T Consensus 172 ~~~~~~~~~~~d~~liNG~~--~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~p 248 (451)
T 2uxt_A 172 YNEPGSGGFVGDTLLVNGVQ--SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAP 248 (451)
T ss_dssp CCCCSSSCCCCSEEEETTEE--SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECT
T ss_pred cccccCCCCcCCEEEECCcc--cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECc
Confidence 00112234568999999999 899999999 9999999999999999999 899999999999987 799999999999
Q ss_pred CCeEEEEEEeCCCCcceEEEEeeccCC-----------CccceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccc
Q 009127 258 GQTYSVLVTMDQAPQDYYIVVSSRFTP-----------RVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRW 326 (543)
Q Consensus 258 geR~dv~v~~~~~~g~y~i~~~~~~~~-----------~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 326 (543)
||||||+|+++ .++.|+|++...... ......++++|........ .....| .
T Consensus 249 geR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p---------------~ 311 (451)
T 2uxt_A 249 GERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLP---------------M 311 (451)
T ss_dssp TCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCC---------------S
T ss_pred eeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCc---------------c
Confidence 99999999999 478999997653210 1122356777765432110 000000 1
Q ss_pred ccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCC
Q 009127 327 NLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGN 406 (543)
Q Consensus 327 ~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~ 406 (543)
.|.+....+. ....++++.+.. .|+|||++|..+..
T Consensus 312 ~L~~~~~~~~--------~~~~~~~~~l~~---------~~~iNg~~f~~~~~--------------------------- 347 (451)
T 2uxt_A 312 RLLPTEIMAG--------SPIRSRDISLGD---------DPGINGQLWDVNRI--------------------------- 347 (451)
T ss_dssp CSSSSCCCCC--------CCSEEEEEEECS---------SSSBTTBCCCTTCC---------------------------
T ss_pred ccCCCCCCCC--------CCcceEEEEEee---------EEEECCEeCCCCCC---------------------------
Confidence 1111111110 123456665531 48999999853211
Q ss_pred CccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 009127 407 AYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMAL 486 (543)
Q Consensus 407 ~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a 486 (543)
.+.++.|++++|+|+|. +.||||||||+||||++++.. ++..+|.|||||.| +++++|+|++
T Consensus 348 ------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~~--------~~~~~p~~rDTv~v--g~~~~i~~~~ 409 (451)
T 2uxt_A 348 ------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGAM--------PFPEDRGWKDTVWV--DGQVELLVYF 409 (451)
T ss_dssp ------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTBC--------CCGGGSSCBSEEEE--EEEEEEEEEC
T ss_pred ------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCcC--------CCcccCCCccEEEE--CCEEEEEEEe
Confidence 13567899999999997 799999999999999997532 34567899999999 8999999999
Q ss_pred cCccc----ceeeecchhhhhcccEEEEEEecCC
Q 009127 487 DNVGM----WNIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 487 dnpG~----w~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
||||. |||||||++|||.|||+.|+|...+
T Consensus 410 dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 410 GQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp CSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred CCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 99988 9999999999999999999998654
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-83 Score=692.77 Aligned_cols=417 Identities=15% Similarity=0.168 Sum_probs=324.1
Q ss_pred CeEEEEEEEEEEE--ecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCC
Q 009127 27 PYRFFTWKITYGD--IYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTC 104 (543)
Q Consensus 27 ~~~~~~l~~~~~~--~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~ 104 (543)
.+++|+|++++.. +.++|..+.+|+|||++|||+|||++||+|+|+|+|+|+++++|||||+++.. .+||++ ||
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~ 110 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--ED 110 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SS
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CC
Confidence 3578999999755 57889899999999999999999999999999999999999999999998764 699997 89
Q ss_pred cCCCCCeEEEEEEeCCCcccceecCCch----hhhhccceeEEEEecCCCCCCCCCC--CCCceEEEeeeeeeccHHHHH
Q 009127 105 PIPPGKNFTYVLQAKDQIGSYFYFPSFL----FHKAAGAFGGIRIWSRPRIPVPFPP--PAGDFTVLAGDWYRSNHYVLR 178 (543)
Q Consensus 105 ~i~PG~~~~y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 178 (543)
+|+||++|+|+|++.+++||||||||.. .|+++||+|+|||+++.+.+.+++. .++|++|+|+||+++...++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999975689999999974 5899999999999998765444432 267899999999987543321
Q ss_pred HHhccC-CCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeC-------CeeEEEEEcCcc-ccccc
Q 009127 179 RLLDSG-HNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQG-------HSMKLVEVEGSH-TLQNT 249 (543)
Q Consensus 179 ~~~~~g-~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g-------~~~~via~DG~~-~~p~~ 249 (543)
. ..+ .....+|.++|||+. .|.++|++ ++|||||||+|+.+.+.|+|++ |+|+||++||++ .+|+.
T Consensus 191 ~--~~~~~~~~~gd~~lvNG~~--~p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~ 265 (534)
T 3abg_A 191 T--TNGELNSFWGDVIHVNGQP--WPFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPAD 265 (534)
T ss_dssp C--CTTCSSCCCCSEEEETTEE--SCBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEE
T ss_pred c--cCCCCccccCceeccCCcc--CceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceE
Confidence 0 111 123457999999999 89999998 5999999999999999999987 999999999985 58999
Q ss_pred cCeEEEcCCCeEEEEEEeCCCCc-ceEEEEeecc----C--CCccceEEEEEecCCCCCCCCCCCCCCCCcccccccccc
Q 009127 250 YAALDIHLGQTYSVLVTMDQAPQ-DYYIVVSSRF----T--PRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQAR 322 (543)
Q Consensus 250 ~~~v~l~pgeR~dv~v~~~~~~g-~y~i~~~~~~----~--~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~ 322 (543)
++++.|+|||||||+|++++.+| +|+|++.... . .......++++|..+..+.. +. + .
T Consensus 266 ~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~---~~-~------~----- 330 (534)
T 3abg_A 266 TSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQ---PD-T------S----- 330 (534)
T ss_dssp ESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSC---SC-C------C-----
T ss_pred eceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcC---CC-C------C-----
Confidence 99999999999999999997667 6999874311 0 11123457888875542100 00 0 0
Q ss_pred ccccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCC
Q 009127 323 SIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSP 402 (543)
Q Consensus 323 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p 402 (543)
.++..+.+.. .+.+ ....++++.+... ...|+|||++|.++..|++
T Consensus 331 ~~P~~L~~~~-~p~~-------~~~~~~~~~~~~~------~~~w~iNG~~f~~~~~p~l-------------------- 376 (534)
T 3abg_A 331 VVPANLRDVP-FPSP-------TTNTPRQFRFGRT------GPTWTINGVAFADVQNRLL-------------------- 376 (534)
T ss_dssp CCCCCCCCCS-CCCC-------CCCCCEEEECSCC------CSTTCCCCBTTBCTTSCCC--------------------
T ss_pred CCccccccCC-CCCC-------ccccceEEEEecc------CceeEECCcccCCCCCcce--------------------
Confidence 0001111110 0111 1134566665431 1259999999965444332
Q ss_pred CCCCCccceeEEecCCCcEEEEEEEeCCC-CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEE
Q 009127 403 NWGNAYLQTSVMAANFREFVEIVFQNWED-TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTA 481 (543)
Q Consensus 403 ~~~~~~~~~~~~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~ 481 (543)
+.++.|++++|+|+|.+. +.||||||||+||||+++.|.+.. ..+++.+ .|||||.|+++++++
T Consensus 377 -----------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~ 441 (534)
T 3abg_A 377 -----------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVV 441 (534)
T ss_dssp -----------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEE
T ss_pred -----------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEE
Confidence 235789999999999874 599999999999999996553321 1234455 899999999999999
Q ss_pred EEEE-ecCcccceeeecchhhhhcccEEEEEEecCC
Q 009127 482 IYMA-LDNVGMWNIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 482 irf~-adnpG~w~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
|||+ +||||.|||||||++|+|.|||+.|+|...+
T Consensus 442 I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 442 VEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 9999 8999999999999999999999999998655
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-83 Score=674.73 Aligned_cols=403 Identities=21% Similarity=0.221 Sum_probs=314.7
Q ss_pred cCCCeEEEEEEEEEEEecC-CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCC
Q 009127 24 GDSPYRFFTWKITYGDIYP-LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGT 102 (543)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~t 102 (543)
+.+++++|+|++++..+.. +|+.+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++. +++||++
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCCc--
Confidence 5567899999999999985 7999999999999999999999999999999999999999999999874 6799998
Q ss_pred CCcCCCCCeEEEEEEeCCC-cccceecCCc----hhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHH
Q 009127 103 TCPIPPGKNFTYVLQAKDQ-IGSYFYFPSF----LFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVL 177 (543)
Q Consensus 103 q~~i~PG~~~~y~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 177 (543)
||+|+||++|+|+|+++++ +||||||||. +.|+.+||+|+|||+++++.+.++ +.++ |+++||+++...++
T Consensus 122 q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~~ 197 (481)
T 3zx1_A 122 HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQI 197 (481)
T ss_dssp TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSCC
T ss_pred cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCcc
Confidence 8999999999999999643 7999999995 689999999999999977543322 4454 99999998754332
Q ss_pred H-----HHhccCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccc-cccccC
Q 009127 178 R-----RLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT-LQNTYA 251 (543)
Q Consensus 178 ~-----~~~~~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~-~p~~~~ 251 (543)
. ..+ . ...++.++|||+. .|.++|++|+ ||||||+|+.+.+.|+|+||+|+||++||+++ +|+.++
T Consensus 198 ~~~~~~~~~-~---g~~gd~~lvNG~~--~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~ 269 (481)
T 3zx1_A 198 PNNNLNDWL-N---GREGEFVLINGQF--KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKE 269 (481)
T ss_dssp CCCCHHHHH-H---CCCCSEEEETTEE--SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEES
T ss_pred ccccchhhc-c---CCcCCEEEECCcc--CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeC
Confidence 1 111 1 2357899999999 8999999998 99999999999999999999999999998765 799999
Q ss_pred eEEEcCCCeEEEEEEeCCCCcceEEEEeeccCC-----CccceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccc
Q 009127 252 ALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTP-----RVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRW 326 (543)
Q Consensus 252 ~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~-----~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 326 (543)
++.|+|||||||+|+++ .++.|.+.+...... .......++++..... ..++|.
T Consensus 270 ~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP~------------------ 328 (481)
T 3zx1_A 270 ELFLSPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NVELPK------------------ 328 (481)
T ss_dssp SEEECTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCCS------------------
T ss_pred eEEECCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCC--CccCCc------------------
Confidence 99999999999999999 578899887543210 0111222333322110 011111
Q ss_pred ccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcC-----Ce--------EEEEEcCeeecCCCCchhhhcccCCCccc
Q 009127 327 NLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMN-----GK--------QRYAINSVSFVPADTPLKLADYFKIPGVF 393 (543)
Q Consensus 327 ~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----g~--------~~~~iNg~~f~~~~~p~~~~~~~~~~~~~ 393 (543)
.+.+.+..+. ...++++.+........ +. ..|+|||+.|.. +.|
T Consensus 329 ~l~~~~~~~~---------~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~-~~~------------- 385 (481)
T 3zx1_A 329 NLKIFKPSEE---------PKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL-KRI------------- 385 (481)
T ss_dssp CSCCCCCCCC---------CCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-TCC-------------
T ss_pred cccCCCCCCC---------CCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC-CCc-------------
Confidence 0111111111 12456666643211000 01 139999998842 111
Q ss_pred ccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEee--cCCCCCCCCCCCCCCCCCCccee
Q 009127 394 TLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGM--DGGQWTPASRTRYNLRDTVARST 471 (543)
Q Consensus 394 ~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~--~~g~~~~~~~~~~~~~~p~~rDT 471 (543)
.+.++.|++|+|+|.|.+.+.||||||||+|||+++ ++... ...++.||||
T Consensus 386 -------------------~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~--------~~~~~~~kDT 438 (481)
T 3zx1_A 386 -------------------DLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQ--------KAEFRALRDT 438 (481)
T ss_dssp -------------------CEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEE--------ECSSCCEESE
T ss_pred -------------------eEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCC--------CcccCcccce
Confidence 145788999999999999999999999999999998 43221 1234789999
Q ss_pred EEeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEe
Q 009127 472 TQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 472 v~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.|+|+++++|+|+|||||.|||||||++|+|.|||..|+|.
T Consensus 439 v~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 439 INVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred EEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 999999999999999999999999999999999999999996
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-82 Score=679.54 Aligned_cols=427 Identities=15% Similarity=0.141 Sum_probs=319.9
Q ss_pred CeEEEEEEEEEEEec--CCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCC----------------------Cce
Q 009127 27 PYRFFTWKITYGDIY--PLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLRE----------------------PFL 82 (543)
Q Consensus 27 ~~~~~~l~~~~~~~~--~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~----------------------~~~ 82 (543)
....|+|++++.... +++..+.+|+|||++|||+|||++||+|+|+|+|+|++ +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 345699999998864 45578999999999999999999999999999999985 899
Q ss_pred eecCcccCCCCCCCCCCCC---CCCcCCCCCeE---EEEEEeCCCcccceecCCch----hhhhccceeEEEEecCCCCC
Q 009127 83 ISWNGLQQRRNSWQDGVYG---TTCPIPPGKNF---TYVLQAKDQIGSYFYFPSFL----FHKAAGAFGGIRIWSRPRIP 152 (543)
Q Consensus 83 iH~HG~~~~~~~~~DG~p~---tq~~i~PG~~~---~y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 152 (543)
|||||+++. +++||+++ +||+|+||++| +|+|++.+++||||||||.. .|+++||+|+|||+++.+.+
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999876 57999994 78999999555 99999866799999999974 58999999999999976544
Q ss_pred CCCCCCCCceEEEeeeeeeccHHHHHHHhc-----------cCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcC
Q 009127 153 VPFPPPAGDFTVLAGDWYRSNHYVLRRLLD-----------SGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVG 221 (543)
Q Consensus 153 ~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-----------~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~ 221 (543)
.+++.+++|++|+|+||+++...++..... .......+++++|||+. .|.++|++| +|||||||+|
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~--~p~~~v~~~-~~RlRliNa~ 258 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKV--WPYLEVEPR-KYRFRVINAS 258 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEE--SCEEECCSS-EEEEEEEECC
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCcc--cceEEecCC-EEEEEEEccC
Confidence 444456899999999999876533210000 00123467999999999 899999985 8999999999
Q ss_pred CcceEEEEEeCC-eeEEEEEcCccc-cccccCeEEEcCCCeEEEEEEeCCCCcceE-EEEeecc-CC-CccceEEEEEec
Q 009127 222 LTTSINFRIQGH-SMKLVEVEGSHT-LQNTYAALDIHLGQTYSVLVTMDQAPQDYY-IVVSSRF-TP-RVLTTTAILHYS 296 (543)
Q Consensus 222 ~~~~~~~~i~g~-~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~-i~~~~~~-~~-~~~~~~~il~y~ 296 (543)
+.+.+.|+|+|| +|+||++||+++ +|+.++++.|+|||||||+|++++.+|++. +...... .. ......++++|.
T Consensus 259 ~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~ 338 (513)
T 2wsd_A 259 NTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFR 338 (513)
T ss_dssp SSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEE
T ss_pred CcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCCCcceEEEE
Confidence 999999999999 999999999998 799999999999999999999997677643 3332211 01 112345788887
Q ss_pred CCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecC
Q 009127 297 NSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVP 376 (543)
Q Consensus 297 ~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~ 376 (543)
.+...........|. .+ ......+. .....++++.+.... ...+...|.|||++|..
T Consensus 339 ~~~~~~~~~~~~~p~-----~l----------~~~~~~~~-------~~~~~~~~~~l~~~~-~~~g~~~~~iNg~~~~~ 395 (513)
T 2wsd_A 339 VTKPLAQKDESRKPK-----YL----------ASYPSVQH-------ERIQNIRTLKLAGTQ-DEYGRPVLLLNNKRWHD 395 (513)
T ss_dssp CCSCCSSCCCCCCCS-----BC----------SCCGGGCC-------CCEEEEEEEEEEEEE-CTTSCEEEEETTBCTTS
T ss_pred eccCcccCccCCCCc-----cc----------cCCCCccc-------CCCcceEEEEEEeec-CCCCCceEeECCccCCC
Confidence 653111000000110 01 00000000 012345666665422 12345578999998843
Q ss_pred CCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCC---CC
Q 009127 377 ADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGG---QW 453 (543)
Q Consensus 377 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g---~~ 453 (543)
+. .+.++.|++++|+|+|.+.+.||||||||+||||+++++ .|
T Consensus 396 ~~----------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 396 PV----------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp CC----------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHH
T ss_pred cc----------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccc
Confidence 21 023568999999999998899999999999999998752 11
Q ss_pred CCCC------C-CCCCCCCCCcceeEEeCCCCEEEEEEEe-cCcccceeeecchhhhhcccEEEEEEecC
Q 009127 454 TPAS------R-TRYNLRDTVARSTTQVYPRSWTAIYMAL-DNVGMWNIRSENWARQYLGQQFYLRVYSP 515 (543)
Q Consensus 454 ~~~~------~-~~~~~~~p~~rDTv~vp~~g~v~irf~a-dnpG~w~~HCHil~Hed~GMm~~~~V~~p 515 (543)
++.. + ......++.|||||.|+++++++|+|++ ||||.|||||||++|+|.|||+.|+|..+
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 1100 0 0011223569999999999999999999 89999999999999999999999999754
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-81 Score=689.26 Aligned_cols=441 Identities=14% Similarity=0.101 Sum_probs=308.0
Q ss_pred CCeEEEEEEEEEEEe--cCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCC-----------------------
Q 009127 26 SPYRFFTWKITYGDI--YPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREP----------------------- 80 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~--~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~----------------------- 80 (543)
...+.|+|++.+... .+++..+++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 345778999988776 4566788999999999999999999999999999999754
Q ss_pred ------------------ceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCc----hhhhhcc
Q 009127 81 ------------------FLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSF----LFHKAAG 138 (543)
Q Consensus 81 ------------------~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~G 138 (543)
|+|||||+++. +.+||++ ||+|.||++|+|+|++.+++||||||||. +.|+++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~G 185 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhcc
Confidence 67899999874 5799998 99999999999999997668999999995 6899999
Q ss_pred ceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHH--h-------c-----c---CCCCCCCCeEEEcCCCCC
Q 009127 139 AFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL--L-------D-----S---GHNLPFPDGLLINGRGWN 201 (543)
Q Consensus 139 l~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~--~-------~-----~---g~~~~~~~~~liNG~~~~ 201 (543)
|+|+|||+++.+...+++.+++|++|+|+||+++........ + . . ......++.++|||+.
T Consensus 186 l~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~-- 263 (612)
T 3gyr_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI-- 263 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE--
T ss_pred ceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc--
Confidence 999999998776555555779999999999988754322100 0 0 0 0112356899999999
Q ss_pred cceEEEecCCEEEEEEEEcCCcceEEEEEeCC-------eeEEEEEcCcccc-c------cccCeEEEcCCCeEEEEEEe
Q 009127 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGH-------SMKLVEVEGSHTL-Q------NTYAALDIHLGQTYSVLVTM 267 (543)
Q Consensus 202 ~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~-------~~~via~DG~~~~-p------~~~~~v~l~pgeR~dv~v~~ 267 (543)
.|.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||++++ | ..+++|.|+|||||||+|++
T Consensus 264 ~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~ 342 (612)
T 3gyr_A 264 WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDF 342 (612)
T ss_dssp SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEEC
T ss_pred cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEEC
Confidence 89999986 58999999999999999999998 4999999999873 4 45678999999999999999
Q ss_pred CCCCcceEEEEeeccCC--------CccceEEEEEecCCCCCC--CCCCCCCCCCccc---cccccccccccccCCCCCC
Q 009127 268 DQAPQDYYIVVSSRFTP--------RVLTTTAILHYSNSRRGV--SGPIPGGPTTEIA---WSLNQARSIRWNLTASGPR 334 (543)
Q Consensus 268 ~~~~g~y~i~~~~~~~~--------~~~~~~~il~y~~~~~~~--~~~~p~~p~~~~~---~~~~~~~~~~~~l~~~~~~ 334 (543)
++.+|.++......... .......+++|....... ...+|........ .......... .+......
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 421 (612)
T 3gyr_A 343 RALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLI-VLTPPGTK 421 (612)
T ss_dssp TTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEE-EEECTTCT
T ss_pred CCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccccccccc-cccccccc
Confidence 98777665544322111 012234455554332111 1111110000000 0000000000 00000000
Q ss_pred CCCCCCCCcccccceEEEEEeccC----------------CCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCC
Q 009127 335 PNPQGSYHYGMIKISRTITLANSA----------------PYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSM 398 (543)
Q Consensus 335 ~~p~~~~~~~~~~~~~~~~~~~~~----------------~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~ 398 (543)
. . ........+.... ........|.+|++.|
T Consensus 422 -~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~------------------------ 468 (612)
T 3gyr_A 422 -G-S-------GGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTF------------------------ 468 (612)
T ss_dssp -T-T-------TTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECST------------------------
T ss_pred -c-c-------cccccccccccccccccccccccceeeeccCCCccccccccCccC------------------------
Confidence 0 0 0000000000000 0000011122222221
Q ss_pred CCCCCCCCCccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCC----------------CCCCC
Q 009127 399 PTSPNWGNAYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPAS----------------RTRYN 462 (543)
Q Consensus 399 ~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~----------------~~~~~ 462 (543)
.....+.++.|++|+|+|+|.+.+.||||||||+||||+++++.+.... ....+
T Consensus 469 ----------~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (612)
T 3gyr_A 469 ----------NDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLA 538 (612)
T ss_dssp ----------TSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCC
T ss_pred ----------CCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcc
Confidence 1123356789999999999999999999999999999998754332211 11245
Q ss_pred CCCCCcceeEEeCCCCEEEEEEE-ecCcccceeeecchhhhhcccEEEEEEecCCC
Q 009127 463 LRDTVARSTTQVYPRSWTAIYMA-LDNVGMWNIRSENWARQYLGQQFYLRVYSPAN 517 (543)
Q Consensus 463 ~~~p~~rDTv~vp~~g~v~irf~-adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~ 517 (543)
..++.|||||.|+++++++|||+ +||||.||||||||+|||.|||+.|+|.+|+.
T Consensus 539 ~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 539 PNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp TTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 56788999999999999999999 69999999999999999999999999998763
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-81 Score=664.58 Aligned_cols=381 Identities=17% Similarity=0.213 Sum_probs=298.7
Q ss_pred EEECCc-CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceec
Q 009127 50 ILINGQ-FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYF 128 (543)
Q Consensus 50 ~~~Ng~-~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH 128 (543)
|+|||+ +|||+|||++||+|+|+|+|+|+++++|||||+++. +++||+++ |+|.||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 999999 999999999999999999999999999999999875 56999996 9999999999999997579999999
Q ss_pred CC----chhhhhccceeEEEEecCCCCCCCCCCCC-CceEEEeeeeeeccHHHHHHH--hccCCCCCCCCeEEEcCCCCC
Q 009127 129 PS----FLFHKAAGAFGGIRIWSRPRIPVPFPPPA-GDFTVLAGDWYRSNHYVLRRL--LDSGHNLPFPDGLLINGRGWN 201 (543)
Q Consensus 129 ~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~~-~e~~l~~~d~~~~~~~~~~~~--~~~g~~~~~~~~~liNG~~~~ 201 (543)
|| ++.|+.+||+|+|||+++++. .+++ ++ +|++|+++||+++. .++... .........++.++|||+.
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~-- 178 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVK-- 178 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEE--
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCcc--
Confidence 99 789999999999999997653 2222 35 89999999999976 332110 0000112467999999999
Q ss_pred cceEEEecCCEEEEEEEEcCCcceEEEEE--eC---CeeEEEEEcCcccc-ccccCeEEEcCCCeEEEEEEeCCCCcceE
Q 009127 202 GYTFTVEPGRTYRFRISNVGLTTSINFRI--QG---HSMKLVEVEGSHTL-QNTYAALDIHLGQTYSVLVTMDQAPQDYY 275 (543)
Q Consensus 202 ~p~~~v~~G~~~rlRiiN~~~~~~~~~~i--~g---~~~~via~DG~~~~-p~~~~~v~l~pgeR~dv~v~~~~~~g~y~ 275 (543)
.|.++|++| +|||||||+|+.+.+.|+| +| |+|+||++||++++ |..++++.|+|||||||+|+++ .+.|+
T Consensus 179 ~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~ 255 (448)
T 3aw5_A 179 DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYL 255 (448)
T ss_dssp TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEE
T ss_pred cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECC--CCceE
Confidence 899999999 9999999999999999999 99 99999999999998 9999999999999999999998 36899
Q ss_pred EEEeeccC--------------CCccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCC
Q 009127 276 IVVSSRFT--------------PRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSY 341 (543)
Q Consensus 276 i~~~~~~~--------------~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 341 (543)
|++..... .......++++|.+...... |. .+. ..+..+.
T Consensus 256 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~-----~L~----------~lp~~~~----- 309 (448)
T 3aw5_A 256 LKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE-----ALS----------DPPPEPP----- 309 (448)
T ss_dssp EEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC-----CCS----------CCCCCCC-----
T ss_pred EEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc-----ccC----------CCCCCCC-----
Confidence 99865321 01124567778865432110 10 110 0000010
Q ss_pred CcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEe-cCCCc
Q 009127 342 HYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMA-ANFRE 420 (543)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~g~ 420 (543)
....++++.+... ...|+|||++|..+ .|. +. ++.|+
T Consensus 310 ---~~~~~~~~~l~~~------~~~~~iNg~~~~~~-~p~--------------------------------~~~~~~g~ 347 (448)
T 3aw5_A 310 ---KPTRTRRFALSLS------GMQWTINGMFWNAS-NPL--------------------------------FEHVSVEG 347 (448)
T ss_dssp ---CCSEEEEEEEEEE------TTEEEETTBCCCTT-CTT--------------------------------CCCEEECE
T ss_pred ---CCCceEEEEEeCC------CceeeECCCcCCCC-CCc--------------------------------eeccCCCC
Confidence 1235677766531 12599999998531 111 22 46799
Q ss_pred EEEEEEEeCC-CCCCCeeecCCCeEEEeecCCCCC-CCCCCCC----CCCCCCcceeEEeCCCCEEEEE--EE---ecCc
Q 009127 421 FVEIVFQNWE-DTVQSYHIDGYSFFVVGMDGGQWT-PASRTRY----NLRDTVARSTTQVYPRSWTAIY--MA---LDNV 489 (543)
Q Consensus 421 ~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~-~~~~~~~----~~~~p~~rDTv~vp~~g~v~ir--f~---adnp 489 (543)
+++|+|+|.+ .+.||||||||+||||++++ .+. ..+...+ +..++.|||||.|+++++++|+ |+ +|||
T Consensus 348 ~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G-~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp 426 (448)
T 3aw5_A 348 VELWEIVNDKASMPHPMHLHGFPMWIIERKD-SPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL 426 (448)
T ss_dssp EEEEEEEECSSSCCEEEEESSSCBEEEEEES-CCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE
T ss_pred eEEEEEEcCCCCCCcCEEECCceEEEEEecC-CCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc
Confidence 9999999998 88999999999999999963 332 0111122 2334579999999999999766 88 8999
Q ss_pred ccceeeecchhhhhcccEEEEEEe
Q 009127 490 GMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 490 G~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|||||||++|||.|||..|+|.
T Consensus 427 --w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 427 --FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp --EEEEESSHHHHHTTCEEEEEEC
T ss_pred --EEEEcCChHHHhCCCceEEEeC
Confidence 9999999999999999999984
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-80 Score=655.67 Aligned_cols=412 Identities=19% Similarity=0.230 Sum_probs=308.4
Q ss_pred CCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCc
Q 009127 26 SPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCP 105 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~ 105 (543)
...+.|+|++++..++++|+++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.+ .+||++ ||+
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~p--~~~ 90 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG--EVDGGP--QGI 90 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCH--HHHCCT--TCC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCc--ccCCCC--cCc
Confidence 3457899999999998899999999999999999999999999999999999999999999998764 699998 899
Q ss_pred CCCCCeEEEEEEeCCCcccceecCCc----hhhhhccceeEEEEecCCCCCCCCCC--CCCceEEEeeeeeeccHHHHHH
Q 009127 106 IPPGKNFTYVLQAKDQIGSYFYFPSF----LFHKAAGAFGGIRIWSRPRIPVPFPP--PAGDFTVLAGDWYRSNHYVLRR 179 (543)
Q Consensus 106 i~PG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 179 (543)
|.||++++|+|++.+++||||||||. +.|+++||+|+|||+++.+...+++. ..+|++|+++||+++...++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 99999999999996558999999996 68999999999999997653333322 3469999999999975432210
Q ss_pred Hh--ccCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEE-eCCeeEEEEEcCccc-cccccCeEEE
Q 009127 180 LL--DSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRI-QGHSMKLVEVEGSHT-LQNTYAALDI 255 (543)
Q Consensus 180 ~~--~~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i-~g~~~~via~DG~~~-~p~~~~~v~l 255 (543)
.. ........++.++|||+. .|.+.+ +|++|||||||+|+.+.+.|+| +||+|+||++||+++ +|+.++++.|
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~--~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l 247 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAI--YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPV 247 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBS--SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEE
T ss_pred cccccccccCCCCCEEEEcCCc--CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEE
Confidence 00 000012357899999999 788887 5689999999999999999999 699999999999986 8999999999
Q ss_pred cCCCeEEEEEEeCCCCcceEEEEeeccCCC-----ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCC
Q 009127 256 HLGQTYSVLVTMDQAPQDYYIVVSSRFTPR-----VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTA 330 (543)
Q Consensus 256 ~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~ 330 (543)
+|||||||+|+++ .++.|.+++....... ......+++......+....+|. .|..
T Consensus 248 ~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~------------------~L~~ 308 (488)
T 3od3_A 248 LMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPD------------------TLSS 308 (488)
T ss_dssp CTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCS------------------CCCC
T ss_pred CCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCc------------------cccc
Confidence 9999999999999 4778999875432110 01111222222110000001111 0111
Q ss_pred CCCCCCCCCCCCcccccceEEEEEeccC-------------------CCc----------CCe-------------EEEE
Q 009127 331 SGPRPNPQGSYHYGMIKISRTITLANSA-------------------PYM----------NGK-------------QRYA 368 (543)
Q Consensus 331 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------~~~----------~g~-------------~~~~ 368 (543)
.+..+.. ....+|++.+.... ... .|. ..|.
T Consensus 309 ~~~~~~~-------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ 381 (488)
T 3od3_A 309 LPALPSL-------EGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANK 381 (488)
T ss_dssp CCCCCCC-------TTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEE
T ss_pred CCCCccc-------ccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceee
Confidence 0000000 01224444442100 000 010 1389
Q ss_pred EcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEeCC-CCCCCeeecCCCeEEEe
Q 009127 369 INSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWE-DTVQSYHIDGYSFFVVG 447 (543)
Q Consensus 369 iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~ 447 (543)
|||+.|.. +.| .+.++.|++|+|+|.|.+ .+.|||||||++|+|++
T Consensus 382 ING~~~~~-~~~--------------------------------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~ 428 (488)
T 3od3_A 382 INGQAFDM-NKP--------------------------------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILS 428 (488)
T ss_dssp ETTBCCCT-TCC--------------------------------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEE
T ss_pred ECCeeCCC-CCC--------------------------------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEec
Confidence 99998842 111 145789999999999987 67999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEec----CcccceeeecchhhhhcccEEEEEE
Q 009127 448 MDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALD----NVGMWNIRSENWARQYLGQQFYLRV 512 (543)
Q Consensus 448 ~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad----npG~w~~HCHil~Hed~GMm~~~~V 512 (543)
+++.... ..++.|||||.|+ +++++|+|++| +||.||||||+|+|||.|||..|+|
T Consensus 429 ~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 429 ENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp BTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred cCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 9754322 1245799999999 99999999974 5789999999999999999999986
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-55 Score=502.64 Aligned_cols=390 Identities=14% Similarity=0.195 Sum_probs=272.1
Q ss_pred cccCCCeEEEEEEEEEEEe--cCCCe--------------------------eEEEE-------EECCc--------CCC
Q 009127 22 VYGDSPYRFFTWKITYGDI--YPLGV--------------------------KQQGI-------LINGQ--------FPG 58 (543)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~--~~~g~--------------------------~~~~~-------~~Ng~--------~pg 58 (543)
..+.+.+|+|-+.|.+..+ .+.|. .+++. +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 4455779999999999886 33332 23333 57877 999
Q ss_pred ceEEEecCCEEEEEEEECCCCCceeecCcccCC----CCCCCCCCCC---CCCcCCCCCeEEEEEEeCCC---------c
Q 009127 59 PQIDAVTNDNLIISVYNYLREPFLISWNGLQQR----RNSWQDGVYG---TTCPIPPGKNFTYVLQAKDQ---------I 122 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~----~~~~~DG~p~---tq~~i~PG~~~~y~f~~~~~---------~ 122 (543)
|+|||++||+|+|+|+|+|+++++|||||++++ +.+++||+++ +||+|+||++|+|+|+++++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 999999999999999999999999999999987 4567788774 79999999999999999754 4
Q ss_pred ccceecCCchh--hhhccceeEEEEecCCCCCCCCC-CCCCceEEEeee------eeeccHHHHHHHh-ccCCCC-----
Q 009127 123 GSYFYFPSFLF--HKAAGAFGGIRIWSRPRIPVPFP-PPAGDFTVLAGD------WYRSNHYVLRRLL-DSGHNL----- 187 (543)
Q Consensus 123 Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~~~d------~~~~~~~~~~~~~-~~g~~~----- 187 (543)
||||||||.+. |+.+||+|+|||++++..+.|.+ .+|+|++|+++| |++... +.... +.+...
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~~~ 252 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDNED 252 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTCHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccccc
Confidence 99999999874 56899999999999875433322 458899999995 444321 11121 111000
Q ss_pred --CCCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCc-ceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEE
Q 009127 188 --PFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLT-TSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSV 263 (543)
Q Consensus 188 --~~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~-~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv 263 (543)
..++.++|||+.+ ..+.+++++|++|||||+|+|.. ..+.|||+||+|+ ++|..+|++.|+||||+||
T Consensus 253 ~~~~~~~~~iNG~~~~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dV 324 (1065)
T 2j5w_A 253 FQQSNRMYSVNGYTFGSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDA 324 (1065)
T ss_dssp HHHHTEEEEETTEETTCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEEEE
T ss_pred ccccCcEEEECCccCCCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEE
Confidence 0235799999984 35789999999999999999975 6899999999999 3567899999999999999
Q ss_pred EEEeCCCCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCC------CCCC
Q 009127 264 LVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGP------RPNP 337 (543)
Q Consensus 264 ~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~------~~~p 337 (543)
+|++++ +|.|+|+|....... ....+.++|.+...+.+.+.|..+ .....+.+++.+.|++.+... .+++
T Consensus 325 lv~~~~-pG~y~i~~h~~~h~~-~Gm~~~~~V~~~~~~~~~~~~~g~--~~~~~~i~A~e~~wdy~~~~~~~~~~~~~~~ 400 (1065)
T 2j5w_A 325 YMVAQN-PGEWMLSCQNLNHLK-AGLQAFFQVQECNKSSSKDNIRGK--HVRHYYIAAEEIIWNYAPSGIDIFTKENLTA 400 (1065)
T ss_dssp EEECCS-CEEEEEEECSHHHHH-TTCEEEEEEECSCCCCCCCCCTTS--EEEEEEEEEEEEEEESCTTSBCTTTCCBTTC
T ss_pred EEEeCC-CeeEEEEecCcchhh-CCCEEEEEEecCCCcccccccccc--ceeEEEEeceecccccCCCCcccccccccCC
Confidence 999995 899999998753221 356788888776544333332221 111124456777787775542 1222
Q ss_pred CCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecC
Q 009127 338 QGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAAN 417 (543)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 417 (543)
.+++ ...+ |.......++++...++ +.|.+ +.|+.+ ....|.........+++.++
T Consensus 401 ~~s~-------~~~~-l~~~~~~ig~~y~k~v~-~~y~d--------------~~f~~~-~~~~~~~~~~g~lgpvi~a~ 456 (1065)
T 2j5w_A 401 PGSD-------SAVF-FEQGTTRIGGSYKKLVY-REYTD--------------ASFTNR-KERGPEEEHLGILGPVIWAE 456 (1065)
T ss_dssp TTCT-------THHH-HCCBTTBCCSEEEEEEE-EEESS--------------TTCCSB-CCCCGGGGGGTTSCCCEEEE
T ss_pred Cccc-------chhh-hccCCcccCceEeeeee-ecccC--------------CceEEc-CcCCcccccccccCceEEEe
Confidence 2211 1112 22222334556655665 55642 122211 11122111122335678999
Q ss_pred CCcEEEEEEEeCCCCCCCeeecCCCeEEEeec
Q 009127 418 FREFVEIVFQNWEDTVQSYHIDGYSFFVVGMD 449 (543)
Q Consensus 418 ~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~ 449 (543)
.|++++++|.|.....|+||+||+.|++++.|
T Consensus 457 ~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g 488 (1065)
T 2j5w_A 457 VGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEG 488 (1065)
T ss_dssp TTEEEEEEEEECSSSCBCCEEESSBCCGGGCS
T ss_pred CCCEEEEEEEECCCCCccCcccceeeeccCCC
Confidence 99999999999999999999999999988753
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-54 Score=434.88 Aligned_cols=266 Identities=23% Similarity=0.325 Sum_probs=225.5
Q ss_pred CeEEEEEEEEEEEecC-CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCC
Q 009127 27 PYRFFTWKITYGDIYP-LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTC 104 (543)
Q Consensus 27 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~ 104 (543)
++++|+|++++..+.+ +|..+.+|+|||++|||+|||++||+|+|+|+|.++.+++|||||+++.+..++||+|+ +||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4789999999999876 68889999999999999999999999999999999999999999999988789999998 999
Q ss_pred cCCCCCeEEEEEEeCCCcccceecCCchhhh---hccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHh
Q 009127 105 PIPPGKNFTYVLQAKDQIGSYFYFPSFLFHK---AAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLL 181 (543)
Q Consensus 105 ~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 181 (543)
+|+||++++|+|++ +++||||||||...+. .+||+|+|||++++..+.+. .+++|++|+++||+++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---G 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---c
Confidence 99999999999999 4899999999987543 48999999999875422111 458999999999987642211 1
Q ss_pred ccCCCCCCCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccc-cccccCeEEEcCCC
Q 009127 182 DSGHNLPFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT-LQNTYAALDIHLGQ 259 (543)
Q Consensus 182 ~~g~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~-~p~~~~~v~l~pge 259 (543)
..+.....++.++|||+.+ ..+.+++++|++|||||+|++.. .|+|||+||+|+||+.||.++ +|..+|++.|+|||
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pge 234 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGE 234 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTC
T ss_pred cCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCC
Confidence 1122223578999999984 12349999999999999999986 799999999999999999998 78999999999999
Q ss_pred eEEEEEEeCCCCcceEEEEeeccCCC-----ccceEEEEEecCCC
Q 009127 260 TYSVLVTMDQAPQDYYIVVSSRFTPR-----VLTTTAILHYSNSR 299 (543)
Q Consensus 260 R~dv~v~~~~~~g~y~i~~~~~~~~~-----~~~~~~il~y~~~~ 299 (543)
|+||+|+++ .+|.|.++|+...... .....++|+|.+..
T Consensus 235 r~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 235 RYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999 6999999998754332 13457889998764
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-55 Score=487.83 Aligned_cols=238 Identities=16% Similarity=0.200 Sum_probs=178.9
Q ss_pred EEEEEEEEecC-CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCC----CCCCCCCCC---CCC
Q 009127 32 TWKITYGDIYP-LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQR----RNSWQDGVY---GTT 103 (543)
Q Consensus 32 ~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~----~~~~~DG~p---~tq 103 (543)
.|++.++.... .|+.+..|+ ++|||+|||++||+|+|+|+|.|+++++|||||+++. +.+++||++ .+|
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq 126 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKED 126 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCccccccc
Confidence 44444444433 255555443 8999999999999999999999999999999999875 344455554 279
Q ss_pred CcCCCCCeEEEEEEeCC---------CcccceecCCchh--hhhccceeEEEEecCCCCCCCCCCCCCceEEEeee----
Q 009127 104 CPIPPGKNFTYVLQAKD---------QIGSYFYFPSFLF--HKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGD---- 168 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d---- 168 (543)
|+|+||++|+|+|++++ ++||||||||.+. |+.+||+|+|||+++...........+|+++++++
T Consensus 127 ~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~ 206 (742)
T 2r7e_A 127 DKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEG 206 (742)
T ss_dssp SSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCS
T ss_pred CcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCC
Confidence 99999999999999853 4699999999775 89999999999999765322111223788888764
Q ss_pred --eeeccHHHHHHHhccCCCCCCCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCcc-eEEEEEeCCeeEEEEEcCcc
Q 009127 169 --WYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLTT-SINFRIQGHSMKLVEVEGSH 244 (543)
Q Consensus 169 --~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~~-~~~~~i~g~~~~via~DG~~ 244 (543)
|++.........+.........+.++|||+.+ ..+.+++++|++|||||+|+++.. .|.||||||.|+|++.
T Consensus 207 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~---- 282 (742)
T 2r7e_A 207 KSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNRSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH---- 282 (742)
T ss_dssp SSSCCCCCC-------CCSCCCCCCCCEETTBCTBCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE----
T ss_pred ccccccccccccccCCCccccccCceEEECCccCCCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE----
Confidence 44432111000011111122356789999985 357899999999999999999864 7999999999999842
Q ss_pred ccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeec
Q 009127 245 TLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSR 281 (543)
Q Consensus 245 ~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 281 (543)
.+|++.|.|||+++|+++++ .+|.|+++|+..
T Consensus 283 ----~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 283 ----RQASLEISPITFLTAQTLLM-DLGQFLLFCHIS 314 (742)
T ss_dssp ----ECCSCCCCTTCCCEEEECCC-SCSEECCCCCSS
T ss_pred ----ecceEEeCCCcEEEEEEEeC-CCeeEEEEeCCh
Confidence 36889999999999999999 699999999865
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-53 Score=429.74 Aligned_cols=266 Identities=22% Similarity=0.363 Sum_probs=224.3
Q ss_pred CeEEEEEEEEEEEecC-CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCC
Q 009127 27 PYRFFTWKITYGDIYP-LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTC 104 (543)
Q Consensus 27 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~ 104 (543)
.+++|+|++++..+.+ +|.++.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++...+++||+|+ +||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 4689999999999876 59999999999999999999999999999999999999999999999988888999998 999
Q ss_pred cCCCCCeEEEEEEeCCCcccceecCCchh--hhh-ccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHHh
Q 009127 105 PIPPGKNFTYVLQAKDQIGSYFYFPSFLF--HKA-AGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLL 181 (543)
Q Consensus 105 ~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 181 (543)
+|.||++|+|+|+++ ++||||||||... |+. +||+|+|||+++.....+ ...++|++++++||+...... ..
T Consensus 82 ~I~PG~~~~y~f~~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~---~~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKAD-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK---YG 156 (339)
T ss_dssp CBCTTCEEEEEEECC-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC---TT
T ss_pred ccCCCCeEEEEEECC-CCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc---cC
Confidence 999999999999995 8999999999764 888 999999999986542211 135789999999998742110 00
Q ss_pred ccCCCCCCCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcccc-ccccCeEEEcCCC
Q 009127 182 DSGHNLPFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTL-QNTYAALDIHLGQ 259 (543)
Q Consensus 182 ~~g~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~-p~~~~~v~l~pge 259 (543)
..+.....++.++|||+.+ ..+.+++++|++|||||+|+++. .|+|||+||+|+||+.||.+++ |..+|++.|+|||
T Consensus 157 ~~g~~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~ 235 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGE 235 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTC
T ss_pred CCCCCccccceEEEccccCCCcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCC
Confidence 1111222578999999984 12349999999999999999965 8999999999999999999985 8889999999999
Q ss_pred eEEEEEEeCCCCcceEEEEeeccC-----CCccceEEEEEecCCC
Q 009127 260 TYSVLVTMDQAPQDYYIVVSSRFT-----PRVLTTTAILHYSNSR 299 (543)
Q Consensus 260 R~dv~v~~~~~~g~y~i~~~~~~~-----~~~~~~~~il~y~~~~ 299 (543)
|+||+|+++ .+|.|+++|+.... .......++|+|.+..
T Consensus 236 r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 236 RYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999998 58999999986542 1223457899998754
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-50 Score=428.78 Aligned_cols=396 Identities=16% Similarity=0.126 Sum_probs=263.8
Q ss_pred CeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcC
Q 009127 27 PYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPI 106 (543)
Q Consensus 27 ~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i 106 (543)
.++++.++++++.+..+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||.... ++|+|
T Consensus 27 ~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~----------~~~~i 92 (447)
T 2dv6_A 27 VVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAAR----------SAIVN 92 (447)
T ss_dssp EEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEE----------CCCBC
T ss_pred ceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCcc----------cceec
Confidence 445566666554454443 566999999 9999999999999999999988899999996311 47999
Q ss_pred CCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCCCCCC--CC---CCCCceEEEeeeeeeccHHH--HH-
Q 009127 107 PPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVP--FP---PPAGDFTVLAGDWYRSNHYV--LR- 178 (543)
Q Consensus 107 ~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~--~~---~~~~e~~l~~~d~~~~~~~~--~~- 178 (543)
.||++++|.|++. ++||||||||...|+.+||.|.|+|+++...... +. ....+++..+ |+....... +.
T Consensus 93 ~pG~~~~~~f~~~-~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~ 170 (447)
T 2dv6_A 93 GKNASSTFSFVAS-KVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDLET 170 (447)
T ss_dssp STTBEEEEEEECC-SCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEEEE
T ss_pred CCCCeEEEEEEcC-CCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEEEE
Confidence 9999999999995 6999999999989999999999999986542210 00 0001111100 100000000 00
Q ss_pred HHhccC-CCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCC-cceEEEEEeCCeeEEEEEcCccccccccCeEEEc
Q 009127 179 RLLDSG-HNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGL-TTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIH 256 (543)
Q Consensus 179 ~~~~~g-~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~-~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~ 256 (543)
...... ......+.+++||+.. .|.+++++|++||||++|.+. ...+.+|+||. ++.||.+ +++.|.
T Consensus 171 ~~~~~~~~~g~~~~~~~~NG~~p-gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------~~~~i~ 239 (447)
T 2dv6_A 171 VEVKGQLDDNTTYTYWTFNGKVP-GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------AFTQTD 239 (447)
T ss_dssp EEEEEEEETTEEEEEEEETTBBS-CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------GGCCBC
T ss_pred EEEEEeccCCceeEEEEECCccC-CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------ccEEeC
Confidence 000000 0012346799999953 689999999999999999985 34677888874 2578874 234599
Q ss_pred CCCeEEEEEEeCCCCcceEEEEeeccC-CC-ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCC
Q 009127 257 LGQTYSVLVTMDQAPQDYYIVVSSRFT-PR-VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPR 334 (543)
Q Consensus 257 pgeR~dv~v~~~~~~g~y~i~~~~~~~-~~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~ 334 (543)
||||++++|+++ .+|+||++++.... .+ .....+.|.|.+.. .+|. .+....+.. -++.....
T Consensus 240 pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~-----~~P~---~d~~~~~~~---~~~~~~~~--- 304 (447)
T 2dv6_A 240 PGEETVVTFKAL-IPGIYVYHCATPSVPTHITNGMYGLLLVEPEG-----GLPQ---VDREFYVMQ---GEIYTVKS--- 304 (447)
T ss_dssp TTCEEEEEEECC-SCEEEEEECCSSSHHHHHHTTCEEEEEEECTT-----CSCC---CSEEEEEEE---EEECBSSC---
T ss_pred CCCEEEEEEECC-CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCC-----CCCC---CCeeEEEEe---cccccCCc---
Confidence 999999999998 47999999975211 11 12345677776432 1221 111100000 00100000
Q ss_pred CCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEE
Q 009127 335 PNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVM 414 (543)
Q Consensus 335 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 414 (543)
.... +.. .+.+... .......|.|||+.+.... ...+
T Consensus 305 ~~~~-----g~~----~~~~~~~--~~~~~~~~~iNG~~~~~~~--------------------------------~~~~ 341 (447)
T 2dv6_A 305 FGTS-----GEQ----EMDYEKL--INEKPEYFLFNGSVGSLTR--------------------------------SHPL 341 (447)
T ss_dssp TTCC-----EEC----CBBHHHH--HTTCCSEEEETTSTTCCCC--------------------------------CCCE
T ss_pred cccc-----ccc----cCChHHh--hccCCCEEEECCcccCCCC--------------------------------Ccce
Confidence 0000 000 0000000 0011246899998763100 1236
Q ss_pred ecCCCcEEEEEEEeCC-CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCC-cceeEEeCCCCEEEEEEEecCcccc
Q 009127 415 AANFREFVEIVFQNWE-DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTV-ARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 415 ~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++.|++++|+|.|.+ ...||||||||+|+||+.+++.. ..|. +|||+.|+++++++|+|++||||.|
T Consensus 342 ~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~----------~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~ 411 (447)
T 2dv6_A 342 YASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVV----------SPPLIGVQTVSVPPGGATIVDFKIDRAGRY 411 (447)
T ss_dssp EECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSS----------SCCEEEESEEEECTTEEEEEEEECCSCEEE
T ss_pred EECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCccc----------CCCcccccEEEECCCcEEEEEEECCCCEEE
Confidence 7789999999999986 46899999999999999975422 2344 7999999999999999999999999
Q ss_pred eeeecchhhhhcccEEEEEEecCCC
Q 009127 493 NIRSENWARQYLGQQFYLRVYSPAN 517 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~p~~ 517 (543)
++|||+++|++.|||+.|+|..+..
T Consensus 412 ~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 412 ILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EEEESSGGGGGGTCCEEEEECSCSC
T ss_pred EEEecCcCccccCCEEEEEEeCCCC
Confidence 9999999999999999999987654
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=404.52 Aligned_cols=259 Identities=20% Similarity=0.277 Sum_probs=220.0
Q ss_pred cCCCeEEEEEEEEEEEecC-CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC--CCceeecCcccCCCCCCCCCCC
Q 009127 24 GDSPYRFFTWKITYGDIYP-LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR--EPFLISWNGLQQRRNSWQDGVY 100 (543)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~--~~~~iH~HG~~~~~~~~~DG~p 100 (543)
+.+++++|+|++++..+.+ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++ ..+++||||+. .+||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCC
Confidence 3456789999999999887 899999999999999999999999999999999997 58999999984 378877
Q ss_pred CCCCcCCCCCeEEEEEEeCCCcccceecCCc---hhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHH-
Q 009127 101 GTTCPIPPGKNFTYVLQAKDQIGSYFYFPSF---LFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYV- 176 (543)
Q Consensus 101 ~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~- 176 (543)
. ...|.||++++|+|++ +++||||||||. +.|+.+||+|+|||++++. .+.+|+|++++++||++.....
T Consensus 109 ~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 109 A-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp T-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTC
T ss_pred c-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCcccc
Confidence 4 2359999999999999 479999999996 6899999999999998653 2246899999999999874210
Q ss_pred -------HHHHhccCCCCCCCCeEEEcCCCCC---cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcccc
Q 009127 177 -------LRRLLDSGHNLPFPDGLLINGRGWN---GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTL 246 (543)
Q Consensus 177 -------~~~~~~~g~~~~~~~~~liNG~~~~---~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~ 246 (543)
..... ...++.++|||+.+. .+.+++++|++|||||+|+|+.+.+.|||+||+|+||+.||.+++
T Consensus 183 ~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~ 257 (327)
T 1kbv_A 183 QGLQPFDMDKAV-----AEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLI 257 (327)
T ss_dssp CEEECBCHHHHH-----HTCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCE
T ss_pred ccccccChhHhc-----cCCCceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCC
Confidence 11111 124689999999841 147999999999999999998889999999999999999999999
Q ss_pred ccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCC
Q 009127 247 QNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSR 299 (543)
Q Consensus 247 p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~ 299 (543)
|..++++.|+||||+||+|+++ .+|.|+|+++...........|+|+|.+..
T Consensus 258 p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 258 NENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp ECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CCceeEEEECCCCEEEEEEEeC-CCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 9999999999999999999999 589999999865432123578999998765
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-48 Score=386.59 Aligned_cols=234 Identities=21% Similarity=0.306 Sum_probs=205.4
Q ss_pred CCeEEEEEEEEEEEecC-CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CC
Q 009127 26 SPYRFFTWKITYGDIYP-LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TT 103 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq 103 (543)
..+++|+|++++..+.. +|..+.+|+|||++|||+|||++||+|+|+|+|.++++++|||||++ ..++||+|+ +|
T Consensus 32 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~ 108 (288)
T 3gdc_A 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGA 108 (288)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTT
T ss_pred CcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccc
Confidence 34689999999998765 59999999999999999999999999999999999999999999996 357999998 99
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCch---hhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHHHHHH
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSFL---FHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRL 180 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 180 (543)
++|+||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ ..++|++|+++||+.+.
T Consensus 109 ~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 109 GSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp CSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS-------
T ss_pred eeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC-------
Confidence 999999999999999 5899999999976 79999999999999976532 34799999999998762
Q ss_pred hccCCCCCCCCeEEEcCCCCC--cceEEEecCCEEEEEEEEcCCcc-eEEEEEeCCeeEEEEEcCccccccccCeEEEcC
Q 009127 181 LDSGHNLPFPDGLLINGRGWN--GYTFTVEPGRTYRFRISNVGLTT-SINFRIQGHSMKLVEVEGSHTLQNTYAALDIHL 257 (543)
Q Consensus 181 ~~~g~~~~~~~~~liNG~~~~--~p~~~v~~G~~~rlRiiN~~~~~-~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~p 257 (543)
+ ..++.++|||+.+. .+.++++.|++||||++|++... .|+|||+||.|+|++.++....|...|++.|.|
T Consensus 177 ---g---~~~~~~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~p 250 (288)
T 3gdc_A 177 ---G---DDNEFYSVNGLPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQ 250 (288)
T ss_dssp ---T---TCCSEEEETTSTTHHHHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEESEEEEET
T ss_pred ---C---CCcceEEECcccccccCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCceeeEEEeCC
Confidence 1 24679999999841 24799999999999999999653 799999999999998444333568899999999
Q ss_pred CCeEEEEEEeCCCCcceEEEEeec
Q 009127 258 GQTYSVLVTMDQAPQDYYIVVSSR 281 (543)
Q Consensus 258 geR~dv~v~~~~~~g~y~i~~~~~ 281 (543)
|||++|+++++ .||.|.++|+..
T Consensus 251 g~~~~v~~~~~-~pG~~~~hCH~~ 273 (288)
T 3gdc_A 251 GQRGILELRFP-YPGKFMFHAHKT 273 (288)
T ss_dssp TCEEEEEECCC-SCEEEEEECSSH
T ss_pred CceEEEEEECC-CCEEEEEEecCh
Confidence 99999999999 799999999764
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=391.33 Aligned_cols=241 Identities=18% Similarity=0.190 Sum_probs=191.2
Q ss_pred CCeEEEEEEEEEEEecCCCeeE-EEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCC
Q 009127 26 SPYRFFTWKITYGDIYPLGVKQ-QGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTC 104 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~g~~~-~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~ 104 (543)
..+++|+|++++. ++|... ..+.+||++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||++.+||
T Consensus 46 g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~~ 120 (343)
T 3cg8_A 46 GEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNKS 120 (343)
T ss_dssp CCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTTC
T ss_pred CeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcccccc
Confidence 3579999999875 345322 22235899999999999999999999999999999999999876 57999998899
Q ss_pred cCCCCCeEEEEEEeCC------------CcccceecCCc------hhhhhccceeEEEEecCCCCCCCCCCCCCceEEEe
Q 009127 105 PIPPGKNFTYVLQAKD------------QIGSYFYFPSF------LFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLA 166 (543)
Q Consensus 105 ~i~PG~~~~y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~ 166 (543)
+|.||++++|+|++.+ ++||||||||. ..|+.+||+|+|||+++... .+|+|+++++
T Consensus 121 ~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~~ 195 (343)
T 3cg8_A 121 DVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIVF 195 (343)
T ss_dssp SBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEEE
T ss_pred cccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEEc
Confidence 9999999999999842 35899999996 37899999999999987542 1356666665
Q ss_pred eeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcccc
Q 009127 167 GDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTL 246 (543)
Q Consensus 167 ~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~ 246 (543)
+|| +|||+.
T Consensus 196 ~d~------------------------~iNG~~----------------------------------------------- 204 (343)
T 3cg8_A 196 NDM------------------------TINNRK----------------------------------------------- 204 (343)
T ss_dssp ETT------------------------EETTCC-----------------------------------------------
T ss_pred ccc------------------------eecccC-----------------------------------------------
Confidence 442 344432
Q ss_pred ccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCCCCCCCCCCCCCCCcccccccccccccc
Q 009127 247 QNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRW 326 (543)
Q Consensus 247 p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 326 (543)
T Consensus 205 -------------------------------------------------------------------------------- 204 (343)
T 3cg8_A 205 -------------------------------------------------------------------------------- 204 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCC
Q 009127 327 NLTASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGN 406 (543)
Q Consensus 327 ~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~ 406 (543)
|. ..
T Consensus 205 -----------------------------------------------~~--~~--------------------------- 208 (343)
T 3cg8_A 205 -----------------------------------------------PH--TG--------------------------- 208 (343)
T ss_dssp -----------------------------------------------TT--CC---------------------------
T ss_pred -----------------------------------------------CC--CC---------------------------
Confidence 00 00
Q ss_pred CccceeEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe
Q 009127 407 AYLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMAL 486 (543)
Q Consensus 407 ~~~~~~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a 486 (543)
..+.++.|++++|+|.|.+.+.||||||||.|+|+.. |.+.. ....+.|+||+.|+|++++.|+|++
T Consensus 209 -----~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 209 -----PDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp -----CCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEET
T ss_pred -----ccEEeCCCCEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEE
Confidence 0023457889999999998899999999999999743 32221 1123578999999999999999995
Q ss_pred ---cCcccceeeecchhhhhcccEEEEEEecCC
Q 009127 487 ---DNVGMWNIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 487 ---dnpG~w~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
+|||.|+||||+++|++.|||..|.|.+++
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCC
Confidence 899999999999999999999999998765
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-48 Score=444.65 Aligned_cols=385 Identities=12% Similarity=0.113 Sum_probs=261.1
Q ss_pred eeEEEEEECCcCCC--ceEEEecCCEEEEEEEECCCCCceeecCcccCCC-CCCCCCCCC-CCCcCCCCCeEEEEEEeCC
Q 009127 45 VKQQGILINGQFPG--PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRR-NSWQDGVYG-TTCPIPPGKNFTYVLQAKD 120 (543)
Q Consensus 45 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~-~~~~DG~p~-tq~~i~PG~~~~y~f~~~~ 120 (543)
..+.+.++||++|| |+|++++||+|+|+|.|. .+.+||||+++.+ +.++||++. | |+|.||.+++|+|++.
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~~- 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWPD- 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECCC-
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEecC-
Confidence 46799999999999 889999999999999975 5569999999998 899999998 7 9999999999999994
Q ss_pred CcccceecCCchhhhhccceeEEEEecCCCCCCCCCCCCCceEEEe----eeeeeccHHHHHHHh-c-cCCC--------
Q 009127 121 QIGSYFYFPSFLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLA----GDWYRSNHYVLRRLL-D-SGHN-------- 186 (543)
Q Consensus 121 ~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~-~-~g~~-------- 186 (543)
++||||||||.+.|+.+||.|.++|++......+...++.|.++.+ +||++.....+...+ . .+..
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~p~~~~~n~ 770 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQNVSNAFLDK 770 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCCCCCTTTCC
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccCccceeecC
Confidence 8999999999999999999999999987554344346788999999 899998655432211 0 1110
Q ss_pred --CCCCC------eEEEcCCC---------------CCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCc
Q 009127 187 --LPFPD------GLLINGRG---------------WNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGS 243 (543)
Q Consensus 187 --~~~~~------~~liNG~~---------------~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~ 243 (543)
...+. ++.+.+.. ...|.|++++|+++++|+.|... ..+.+|.||... ... |
T Consensus 771 ~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl~~--~~~-~- 845 (1065)
T 2j5w_A 771 GEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGVQT--ESS-T- 845 (1065)
T ss_dssp TTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSCBC--SCS-C-
T ss_pred CCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccccc--cCC-C-
Confidence 00011 11111111 02489999999999999999976 467777777433 221 1
Q ss_pred cccccccCeEEEcCCCeEEEEEEeCCC---------CcceEEEEeeccCCCc-cceEEEEEecCCCCCCCCCCCCCCCCc
Q 009127 244 HTLQNTYAALDIHLGQTYSVLVTMDQA---------PQDYYIVVSSRFTPRV-LTTTAILHYSNSRRGVSGPIPGGPTTE 313 (543)
Q Consensus 244 ~~~p~~~~~v~l~pgeR~dv~v~~~~~---------~g~y~i~~~~~~~~~~-~~~~~il~y~~~~~~~~~~~p~~p~~~ 313 (543)
...+.||+++...+.+.+. +|.||.+++.....+. ....+.|.+....... +..+..+
T Consensus 846 --------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~----~~~~~~d 913 (1065)
T 2j5w_A 846 --------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK----VFNPRRK 913 (1065)
T ss_dssp --------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC---------CCCCE
T ss_pred --------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCccccc----ccCCCcc
Confidence 1256899998888887642 2589998764321111 1223334443221100 0001011
Q ss_pred cccccccc---ccccccc----CCCCCCCCCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcc
Q 009127 314 IAWSLNQA---RSIRWNL----TASGPRPNPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADY 386 (543)
Q Consensus 314 ~~~~~~~~---~~~~~~l----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~ 386 (543)
.+..+... ....+.+ .... +.|. .++ +.. .........|.|||+.|..
T Consensus 914 ~D~~l~~~~~d~~~~~y~~~n~~~~~--~~P~--------~v~----~~~-~~~~~~~~~~~iNG~~~~~---------- 968 (1065)
T 2j5w_A 914 LEFALLFLVFDENESWYLDDNIKTYS--DHPE--------KVN----KDD-EEFIESNKMHAINGRMFGN---------- 968 (1065)
T ss_dssp EEEEEEEEEEEGGGSTTHHHHHHHHC--SCGG--------GCC----TTC-HHHHHHTEEEEETTBCTTC----------
T ss_pred eEEEEEEEeecCCcceeeccCccccc--CCcc--------ccC----cch-hhhhccCceEEECCccCCC----------
Confidence 11100000 0000000 0000 0010 000 000 0000011347888887631
Q ss_pred cCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEeCC--CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCC
Q 009127 387 FKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWE--DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLR 464 (543)
Q Consensus 387 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~ 464 (543)
...+.++.|++|+|+|.|.+ .+.||||||||+|+|++++
T Consensus 969 ------------------------~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~--------------- 1009 (1065)
T 2j5w_A 969 ------------------------LQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG--------------- 1009 (1065)
T ss_dssp ------------------------CCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT---------------
T ss_pred ------------------------CccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC---------------
Confidence 11245789999999999985 5789999999999998753
Q ss_pred CCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCC
Q 009127 465 DTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 465 ~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
|.|||||.|+++++++|+|++||||.|+||||+++|++.|||+.|+|.+.+
T Consensus 1010 -p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1010 -VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp -CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred -CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 579999999999999999999999999999999999999999999998765
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=395.78 Aligned_cols=261 Identities=20% Similarity=0.229 Sum_probs=221.8
Q ss_pred ccCCCeEEEEEEEEEEEec-CCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC--CCceeecCcccCCCCCCCCCC
Q 009127 23 YGDSPYRFFTWKITYGDIY-PLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR--EPFLISWNGLQQRRNSWQDGV 99 (543)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~--~~~~iH~HG~~~~~~~~~DG~ 99 (543)
.+.+.+++|+|++++..+. .||..+.+|+|||++|||+|++++||+|+|+|+|.++ ..+++||||+.+ +||+
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 3556789999999999987 5899999999999999999999999999999999986 499999999853 6887
Q ss_pred CCCCCcCCCCCeEEEEEEeCCCcccceecCC---chhhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHHH
Q 009127 100 YGTTCPIPPGKNFTYVLQAKDQIGSYFYFPS---FLFHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHYV 176 (543)
Q Consensus 100 p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H---~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 176 (543)
+.+ .+|.||++++|+|++ +++|||||||| ...|+.+||+|+|||++++.. +.+|+|++|+++||++.....
T Consensus 98 ~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 98 AES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Ccc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 752 369999999999999 57999999997 468999999999999986532 245899999999999875310
Q ss_pred --------HHHHhccCCCCCCCCeEEEcCCCCC---cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccc
Q 009127 177 --------LRRLLDSGHNLPFPDGLLINGRGWN---GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT 245 (543)
Q Consensus 177 --------~~~~~~~g~~~~~~~~~liNG~~~~---~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~ 245 (543)
.. .+ ....+++++|||+.+. .+.+++++|++|||||+|+|....+.|||+||.|+||+.||.++
T Consensus 172 ~~~~~~~~~~-~~----~~~~~~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~ 246 (442)
T 2zoo_A 172 EAGLQPFDMA-KA----IDEDADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL 246 (442)
T ss_dssp CCEEECBCHH-HH----HTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC
T ss_pred ccccccCChh-Hh----ccCCCCEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC
Confidence 00 01 1135789999999842 16899999999999999999888999999999999999999999
Q ss_pred cccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCCC
Q 009127 246 LQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRR 300 (543)
Q Consensus 246 ~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~ 300 (543)
+|..++++.|.||||+||+|+++ .+|.|++++............++++|.+...
T Consensus 247 ~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 247 KNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EECSBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred CCccceEEEECCCeeEEEEEEcC-CCCeEEEEecccccccccCceEEEEecCCCC
Confidence 99999999999999999999999 5899999997654311245789999987653
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=362.64 Aligned_cols=239 Identities=15% Similarity=0.169 Sum_probs=199.7
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCC
Q 009127 24 GDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103 (543)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq 103 (543)
+...++.|+|+|++.. .+.....+++|||++|||+|||++||+|+|+|+|.|+++++|||||+++.. .+||++.+|
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~~t~ 78 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTAMNK 78 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCTTTT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCcCCc
Confidence 4567899999999843 344455778899999999999999999999999999999999999998864 699999889
Q ss_pred CcCCCCCeEEEEEEeCC------------CcccceecCCch------hhhhccceeEEEEecCCCCCCCCCCCCCceEEE
Q 009127 104 CPIPPGKNFTYVLQAKD------------QIGSYFYFPSFL------FHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVL 165 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~------------~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~ 165 (543)
|+|+||++++|+|++++ ++||||||||.. .|+.+||+|+|||+++... ..|+|++++
T Consensus 79 ~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l~ 153 (276)
T 3kw8_A 79 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 153 (276)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEEE
Confidence 99999999999999963 379999999973 6999999999999997642 138999998
Q ss_pred eeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcc
Q 009127 166 AGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSH 244 (543)
Q Consensus 166 ~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~ 244 (543)
+++| +|||+.+ ..+.++++.|+++||||+|.+.. .|+||||||.|++++ ||..
T Consensus 154 l~~~------------------------~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~~f~v~~-~G~~ 207 (276)
T 3kw8_A 154 FNDM------------------------TINNRKPHTGPDFEATVGDRVEIVMITHGEY-YHTFHMHGHRWADNR-TGIL 207 (276)
T ss_dssp EETT------------------------EETTCCTTCCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCEESSS-SSSC
T ss_pred eccc------------------------ccceecccCCCCEEEecCCEEEEEEecCCCc-ceeEEEccceeEEec-cCcc
Confidence 8653 7899875 46899999999999999999985 899999999999875 6654
Q ss_pred cc----ccccCeEEEcCCCeEEEEEEeCC--CCcceEEEEeeccCCCccceEEEEEecCC
Q 009127 245 TL----QNTYAALDIHLGQTYSVLVTMDQ--APQDYYIVVSSRFTPRVLTTTAILHYSNS 298 (543)
Q Consensus 245 ~~----p~~~~~v~l~pgeR~dv~v~~~~--~~g~y~i~~~~~~~~~~~~~~~il~y~~~ 298 (543)
.. +..+|++.|.|||++++++++++ .+|.|+++|+..... .....+.+.+...
T Consensus 208 ~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~-~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 208 TGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHS-DMGMVGLFLVKKP 266 (276)
T ss_dssp CSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH-HTTCEEEEEEECT
T ss_pred CCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHh-hCCCeEEEEEeCC
Confidence 32 35689999999999999999985 699999999864321 1234566666544
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=368.79 Aligned_cols=266 Identities=17% Similarity=0.174 Sum_probs=209.2
Q ss_pred ccCCCeEEEEEEEEEEEecC-CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC
Q 009127 23 YGDSPYRFFTWKITYGDIYP-LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG 101 (543)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~ 101 (543)
.+.+.+++|+|++++..+.+ +|.++.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.+.
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~ 103 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGG 103 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGG
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCc
Confidence 44557899999999999876 6999999999999999999999999999999999 5799999999876544555554
Q ss_pred -CCCcCCCCCeEEEEEEeCCCcccceecCCch-----hhhhccceeEEEEecCCCCC----CCCCCCCCceEEEeeeeee
Q 009127 102 -TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL-----FHKAAGAFGGIRIWSRPRIP----VPFPPPAGDFTVLAGDWYR 171 (543)
Q Consensus 102 -tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~ 171 (543)
+ .|.||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .++ .+|+|++|+++||++
T Consensus 104 ~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 104 LT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYI 179 (333)
T ss_dssp GC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECC
T ss_pred ee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeecc
Confidence 5 49999999999999 4799999999975 69999999999999865421 122 568999999999988
Q ss_pred cc--HHHH----------HHHhccCCCCCCCCeEEEcCCCCC---cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeE
Q 009127 172 SN--HYVL----------RRLLDSGHNLPFPDGLLINGRGWN---GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMK 236 (543)
Q Consensus 172 ~~--~~~~----------~~~~~~g~~~~~~~~~liNG~~~~---~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~ 236 (543)
.. ...+ ...+.. .....++.++|||+... .+.++|++||+||||.+|++....+ ..+++|.|+
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~h~~~ 257 (333)
T 1mzy_A 180 PKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRP-HLIGGHGDL 257 (333)
T ss_dssp CBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCE-EEETCCEEE
T ss_pred CccccccccccccccccccchhHH-hhccCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCcccc-EEECCCCeE
Confidence 31 1100 000000 01245789999999841 3679999999888877766543222 347899999
Q ss_pred EEEEcCcccccc--ccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCC
Q 009127 237 LVEVEGSHTLQN--TYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSR 299 (543)
Q Consensus 237 via~DG~~~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~ 299 (543)
|++ ||.++++. .+|++.|+||||+||+|+++ .+|+|+++|+...........++++|.+..
T Consensus 258 Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 258 VWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 999 99998753 48999999999999999999 589999999875432124677899998754
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-45 Score=366.94 Aligned_cols=242 Identities=15% Similarity=0.167 Sum_probs=199.0
Q ss_pred cccCCCeEEEEEEEEEEEecCCCee-EEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC
Q 009127 22 VYGDSPYRFFTWKITYGDIYPLGVK-QQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY 100 (543)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~g~~-~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p 100 (543)
+.+...++.++|.+. ..++|.. ..++.+||++|||+|||++||+|+|+|+|+|+++++|||||+++. +.+||++
T Consensus 7 ~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAE---RLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEE---ECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCST
T ss_pred CCCCceEEEEEEEEE---EcCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCc
Confidence 445567888888765 3456643 466778999999999999999999999999999999999999875 4699999
Q ss_pred CCCCcCCCCCeEEEEEEeC------------CCcccceecCCch------hhhhccceeEEEEecCCCCCCCCCCCCCce
Q 009127 101 GTTCPIPPGKNFTYVLQAK------------DQIGSYFYFPSFL------FHKAAGAFGGIRIWSRPRIPVPFPPPAGDF 162 (543)
Q Consensus 101 ~tq~~i~PG~~~~y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~ 162 (543)
.+||+|.||++|+|+|++. +++||||||||.. .|+.+||+|+|||+++... .+|+|+
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e~ 156 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRTH 156 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cccccc
Confidence 8999999999999999863 3579999999963 4688999999999997642 348999
Q ss_pred EEEeeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEc
Q 009127 163 TVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVE 241 (543)
Q Consensus 163 ~l~~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~D 241 (543)
+|+++||+. ||+.. ..+.++++.|++|||||+|++.. .++|||+||.|+|++.|
T Consensus 157 ~l~~~d~t~------------------------Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~-~hpfHlHGh~F~v~~~~ 211 (313)
T 3tas_A 157 TIVFNDMTI------------------------NNRPAHTGPDFEATVGDRVEFVMITHGEY-YHTFHLHGHRWADNRTG 211 (313)
T ss_dssp EEEEETTEE------------------------TTCCTTCCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCEESSTTS
T ss_pred eeeccchhc------------------------ccCCcccccccccccCCEEEEEEeccccc-ceeeeecCCeeEEEEEC
Confidence 999999854 34332 25789999999999999999975 89999999999999999
Q ss_pred Cccc---cccccCeEEEcCCCeEEEEEEeCC--CCcceEEEEeeccCCCccceEEEEEecCCC
Q 009127 242 GSHT---LQNTYAALDIHLGQTYSVLVTMDQ--APQDYYIVVSSRFTPRVLTTTAILHYSNSR 299 (543)
Q Consensus 242 G~~~---~p~~~~~v~l~pgeR~dv~v~~~~--~~g~y~i~~~~~~~~~~~~~~~il~y~~~~ 299 (543)
|... .|..+|++.|.||||++++|.+.+ .||.|.++|+..... .....+++.+....
T Consensus 212 ~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~-~~GM~~~f~V~~~d 273 (313)
T 3tas_A 212 MLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHS-DMGMVGLFLVKKPD 273 (313)
T ss_dssp SCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHH-HTTCEEEEEEECTT
T ss_pred CccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHH-HCCCeEEEEEECCC
Confidence 8765 367789999999999999998764 589999999864321 13455666665443
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-45 Score=364.01 Aligned_cols=242 Identities=17% Similarity=0.209 Sum_probs=196.2
Q ss_pred cccCCCeEEEEEEEEEEEecCCC-eeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC
Q 009127 22 VYGDSPYRFFTWKITYGDIYPLG-VKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY 100 (543)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~g-~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p 100 (543)
..+...++.|+|.+++.. ++ ....++.+||++|||+|||++||+|+|+|+|+|++++||||||+++. +.+||++
T Consensus 23 ~~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 23 VRAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp ----CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT
T ss_pred cccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCc
Confidence 456677899999988754 33 33455667999999999999999999999999999999999999765 5799998
Q ss_pred CCCCcCCCCCeEEEEEEeC------------CCcccceecCCch------hhhhccceeEEEEecCCCCCCCCCCCCCce
Q 009127 101 GTTCPIPPGKNFTYVLQAK------------DQIGSYFYFPSFL------FHKAAGAFGGIRIWSRPRIPVPFPPPAGDF 162 (543)
Q Consensus 101 ~tq~~i~PG~~~~y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~ 162 (543)
.+||+|+||++|+|+|+++ +++||||||||.. .|+.+||+|+|||+++... .+|+|+
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~ 172 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQF 172 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEE
T ss_pred cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccccc
Confidence 8999999999999999985 2589999999953 4789999999999987642 348999
Q ss_pred EEEeeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEc
Q 009127 163 TVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVE 241 (543)
Q Consensus 163 ~l~~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~D 241 (543)
++++++|. +||+.+ +.+.++++.||++||||+|++.. .++|||+||.|+++..|
T Consensus 173 ~l~~~~~~------------------------~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHGh~F~v~~~g 227 (299)
T 3t9w_A 173 TVVFNDMM------------------------INNRAHHDAPTFEANLGERVEWIAIGHGSN-FHTFHLHGHRWLDNRTG 227 (299)
T ss_dssp EEEEETTE------------------------ETTCCTTCCCEEEEETTCEEEEEEEEESSC-CCEEEETTCCEESSSSS
T ss_pred eeeeeeee------------------------ecCccccccccceecCCCEEEEEEEecccc-ceeeeEecceEEEEecc
Confidence 99997764 455543 46889999999999999999985 79999999999999888
Q ss_pred Ccccc---ccccCeEEEcCCCeEEEEEEeCC--CCcceEEEEeeccCCCccceEEEEEecCCC
Q 009127 242 GSHTL---QNTYAALDIHLGQTYSVLVTMDQ--APQDYYIVVSSRFTPRVLTTTAILHYSNSR 299 (543)
Q Consensus 242 G~~~~---p~~~~~v~l~pgeR~dv~v~~~~--~~g~y~i~~~~~~~~~~~~~~~il~y~~~~ 299 (543)
+.... +..+|++.|.||||++++|.+.+ .||.|.++|+...... ....+++.+....
T Consensus 228 ~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~-~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 228 MRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSD-MGMAGMFLVRNAD 289 (299)
T ss_dssp SCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHH-TTCEEEEEEECTT
T ss_pred cccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHh-cCCeEEEEEECCC
Confidence 87654 34579999999999999987653 5899999998643211 2345666665443
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=370.04 Aligned_cols=265 Identities=18% Similarity=0.199 Sum_probs=205.9
Q ss_pred cCCCeEEEEEEEEEEEec--CCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC
Q 009127 24 GDSPYRFFTWKITYGDIY--PLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG 101 (543)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~ 101 (543)
+.+.+++|+|++++..+. +||.++.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++++...+||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 355679999999998864 6699999999999999999999999999999999973 45677776665556666655
Q ss_pred -CCCcCCCCCeEEEEEEeCCCcccceecCCc----hhhhhccceeEEEEecCCCCC----CCCCCCCCceEEEeeeeeec
Q 009127 102 -TTCPIPPGKNFTYVLQAKDQIGSYFYFPSF----LFHKAAGAFGGIRIWSRPRIP----VPFPPPAGDFTVLAGDWYRS 172 (543)
Q Consensus 102 -tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~~ 172 (543)
++ |.||++++|+|++. ++||||||||. +.|+.+||+|+|||++++..+ .+. .+|+|++|+++||++.
T Consensus 105 ~~~--i~pG~~~~y~f~~~-~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~ 180 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIP 180 (336)
T ss_dssp GCC--BCTTEEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCC
T ss_pred eEE--eCCCCEEEEEEECC-CCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeec
Confidence 54 99999999999994 79999999996 379999999999999865421 122 5689999999999984
Q ss_pred cH--HHHH----------HHhccCCCCCCCCeEEEcCCCCC---cceEEEecCCEEEEEEEEcCCcceEEE-EEeCCeeE
Q 009127 173 NH--YVLR----------RLLDSGHNLPFPDGLLINGRGWN---GYTFTVEPGRTYRFRISNVGLTTSINF-RIQGHSMK 236 (543)
Q Consensus 173 ~~--~~~~----------~~~~~g~~~~~~~~~liNG~~~~---~p~~~v~~G~~~rlRiiN~~~~~~~~~-~i~g~~~~ 236 (543)
.+ .++. ..+.. .....++.++|||+.+. .+.++|++|++||| +|++..+.+.+ .|++|.|+
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~ 257 (336)
T 1oe1_A 181 KGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTGANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDW 257 (336)
T ss_dssp BCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEE
T ss_pred cccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCCCCcceEcCCCCEEEE--EecCCCCccceEEECCcCce
Confidence 21 1110 00000 01235789999999841 38899999997765 56665555554 46999999
Q ss_pred EEEEcCcccccc--ccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCCC
Q 009127 237 LVEVEGSHTLQN--TYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRR 300 (543)
Q Consensus 237 via~DG~~~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~~ 300 (543)
|++ ||.+++|. .++++.|+||||+||+|++++ +|.|+++++...........|+++|.+...
T Consensus 258 Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 258 VWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhccccCCCeEEEEECCCCC
Confidence 997 99999875 368999999999999999994 899999998753221245789999987653
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-45 Score=372.02 Aligned_cols=266 Identities=18% Similarity=0.170 Sum_probs=206.4
Q ss_pred ccCCCeEEEEEEEEEEEec--CCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC
Q 009127 23 YGDSPYRFFTWKITYGDIY--PLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY 100 (543)
Q Consensus 23 ~~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p 100 (543)
.+.+.+++|+|++++..+. +||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++.+....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 3455789999999999976 569999999999999999999999999999999998 77999999887654444444
Q ss_pred C-CCCcCCCCCeEEEEEEeCCCcccceecCCch----hhhhccceeEEEEecCCCCC----CCCCCCCCceEEEeeeeee
Q 009127 101 G-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL----FHKAAGAFGGIRIWSRPRIP----VPFPPPAGDFTVLAGDWYR 171 (543)
Q Consensus 101 ~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~ 171 (543)
. + .|.||++++|+|+++ ++||||||||.. .|+.+||+|+|||++++..+ .+. .+|+|++|+++||++
T Consensus 110 ~~~--~i~PG~~~~y~~~~~-~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALT--QVNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGC--CBCTTEEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cce--EeCCCCEEEEEEECC-CCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 3 4 499999999999995 799999999964 79999999999999865311 122 468999999999998
Q ss_pred c--cHHH----------HHHHhccCCCCCCCCeEEEcCCCCC---cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeE
Q 009127 172 S--NHYV----------LRRLLDSGHNLPFPDGLLINGRGWN---GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMK 236 (543)
Q Consensus 172 ~--~~~~----------~~~~~~~g~~~~~~~~~liNG~~~~---~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~ 236 (543)
. .... ....++. .....++.++|||+.+. .+.+++++|+++||+++|++.. .+..++++|.|+
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~-~~~~~i~gh~~~ 263 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRD-TRPHLIGGHGDY 263 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSC-BCEEEETCCEEE
T ss_pred ccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCccCCCceEcCCCCEEEEEECCCCCc-cceEEecCcceE
Confidence 3 1111 0000000 00235789999999841 2899999999887776665543 333458999999
Q ss_pred EEEEcCcccccc--ccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCC
Q 009127 237 LVEVEGSHTLQN--TYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSR 299 (543)
Q Consensus 237 via~DG~~~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~ 299 (543)
|++ ||.++++. .++++.|+||||+||+|++++ +|.|+++|+...........++++|.+..
T Consensus 264 Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 264 VWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp EET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 997 99988653 479999999999999999995 89999999875311123467889998755
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-41 Score=369.14 Aligned_cols=262 Identities=15% Similarity=0.160 Sum_probs=191.1
Q ss_pred CCeEEEEEEEEEEEe--cCCC------------eeE--EEEEE----------------CCcCCCceEEEecCCEEEEEE
Q 009127 26 SPYRFFTWKITYGDI--YPLG------------VKQ--QGILI----------------NGQFPGPQIDAVTNDNLIISV 73 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~--~~~g------------~~~--~~~~~----------------Ng~~pgP~i~v~~Gd~v~i~~ 73 (543)
..+|+|-+-+.+..+ ++.| +.. ....| ++++|||+|||++||+|+|+|
T Consensus 4 ~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~~ 83 (647)
T 1sdd_B 4 GNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVRF 83 (647)
T ss_dssp CCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEEE
T ss_pred CCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEEE
Confidence 567899999988886 3322 111 22334 347899999999999999999
Q ss_pred EECCCCCceeecCcccCCCCCCCCCCCC-C--------CCcCCCCCeEEEEEEeCCC-----cc----cceecCCch--h
Q 009127 74 YNYLREPFLISWNGLQQRRNSWQDGVYG-T--------TCPIPPGKNFTYVLQAKDQ-----IG----SYFYFPSFL--F 133 (543)
Q Consensus 74 ~N~l~~~~~iH~HG~~~~~~~~~DG~p~-t--------q~~i~PG~~~~y~f~~~~~-----~G----t~wYH~H~~--~ 133 (543)
+|.|+++++|||||+++. +.+||+|+ + ||+|+||++|+|+|+++++ +| |||||||.. .
T Consensus 84 ~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~~ 161 (647)
T 1sdd_B 84 KNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEK 161 (647)
T ss_dssp CCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHH
T ss_pred EECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCcc
Confidence 999999999999999875 57999997 6 8999999999999999754 57 999999984 7
Q ss_pred hhhccceeEEEEecCCCCCC--CCCCCCCceEEEee------eeeeccHHHHHHHhccCCCCCCCCeEEEcCCCCCcceE
Q 009127 134 HKAAGAFGGIRIWSRPRIPV--PFPPPAGDFTVLAG------DWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTF 205 (543)
Q Consensus 134 q~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~p~~ 205 (543)
|+.+||+|+|||+++..... ..+..++|++|+++ ||+++.................++.++|||+.+..|.+
T Consensus 162 q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~p~l 241 (647)
T 1sdd_B 162 DIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPGL 241 (647)
T ss_dssp HHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSSCCCCC
T ss_pred cccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEecCCCCe
Confidence 99999999999999764321 11234689999999 67665432210000001112346899999998434899
Q ss_pred EEecCCEEEEEEEEcCCcc-eEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCC
Q 009127 206 TVEPGRTYRFRISNVGLTT-SINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTP 284 (543)
Q Consensus 206 ~v~~G~~~rlRiiN~~~~~-~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~ 284 (543)
++++|++|||||+|++... .|.||+|||.|+|++.||. .+|++.|+||||+||+|+++ .+|.|.++|+.....
T Consensus 242 ~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~v~~~~~-~pG~w~~hch~~~h~ 315 (647)
T 1sdd_B 242 RMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKTLEMKAS-KPGWWLLDTEVGEIQ 315 (647)
T ss_dssp EEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EESSEEECTTEEEEEEEECC-SSEEEEEECCCHHHH
T ss_pred EEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccceEEECCCeEEEEEEEec-cceEeecccCccccc
Confidence 9999999999999999864 8999999999999998864 57999999999999999999 589999999864321
Q ss_pred CccceEEEEEec
Q 009127 285 RVLTTTAILHYS 296 (543)
Q Consensus 285 ~~~~~~~il~y~ 296 (543)
. ....+++.+.
T Consensus 316 ~-~Gm~~~~~V~ 326 (647)
T 1sdd_B 316 R-AGMQTPFLIV 326 (647)
T ss_dssp T-TTCEEEEEEE
T ss_pred c-cccccceeee
Confidence 1 2344555554
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=346.02 Aligned_cols=254 Identities=17% Similarity=0.196 Sum_probs=210.1
Q ss_pred CeEEEEEEEEEEEecC-CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC--CCceeecCcccCCCCCCCCCCCC-C
Q 009127 27 PYRFFTWKITYGDIYP-LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR--EPFLISWNGLQQRRNSWQDGVYG-T 102 (543)
Q Consensus 27 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~--~~~~iH~HG~~~~~~~~~DG~p~-t 102 (543)
.++.++|++.+..... +|....+|+|||++|||+|++++||+++|||+|.++ ..++|||||+. .+||++. +
T Consensus 162 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~~ 236 (447)
T 2dv6_A 162 KTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAFT 236 (447)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGGC
T ss_pred cEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCccE
Confidence 4567888887776655 688899999999999999999999999999999986 57899999984 3799886 4
Q ss_pred CCcCCCCCeEEEEEEeCCCcccceecCCch---hhhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHH----
Q 009127 103 TCPIPPGKNFTYVLQAKDQIGSYFYFPSFL---FHKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHY---- 175 (543)
Q Consensus 103 q~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~---- 175 (543)
.|.||++++|.|++. ++||||||||.. .|+.+||+|+|+|+++... +.+++|++++++||++....
T Consensus 237 --~i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~----P~~d~~~~~~~~~~~~~~~~~~~g 309 (447)
T 2dv6_A 237 --QTDPGEETVVTFKAL-IPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGL----PQVDREFYVMQGEIYTVKSFGTSG 309 (447)
T ss_dssp --CBCTTCEEEEEEECC-SCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCS----CCCSEEEEEEEEEECBSSCTTCCE
T ss_pred --EeCCCCEEEEEEECC-CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCC----CCCCeeEEEEecccccCCcccccc
Confidence 399999999999995 799999999963 7899999999999986532 24588999999999875210
Q ss_pred ----HHHHHhccCCCCCCCCeEEEcCCCCCc---ceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcccccc
Q 009127 176 ----VLRRLLDSGHNLPFPDGLLINGRGWNG---YTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQN 248 (543)
Q Consensus 176 ----~~~~~~~~g~~~~~~~~~liNG~~~~~---p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~ 248 (543)
...... + ..++.++|||+.+.. +.+++++|++|||||+|++....|+|||+||+|+||+.||.+++|.
T Consensus 310 ~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p 384 (447)
T 2dv6_A 310 EQEMDYEKLI--N---EKPEYFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPP 384 (447)
T ss_dssp ECCBBHHHHH--T---TCCSEEEETTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSCC
T ss_pred cccCChHHhh--c---cCCCEEEECCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCC
Confidence 011111 1 246789999998411 4799999999999999999878999999999999999999998765
Q ss_pred --ccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCC
Q 009127 249 --TYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSR 299 (543)
Q Consensus 249 --~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~ 299 (543)
.+|++.|.||||++|+|+++ .+|.|+|+|+..... .....++++|.+..
T Consensus 385 ~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h~-~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 385 LIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSRL-EHGLVGFLNVDGPK 435 (447)
T ss_dssp EEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGGG-GGTCCEEEEECSCS
T ss_pred cccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCcc-ccCCEEEEEEeCCC
Confidence 48999999999999999999 589999999876442 23457899997654
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-42 Score=343.45 Aligned_cols=211 Identities=13% Similarity=0.154 Sum_probs=159.6
Q ss_pred EEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-C--------CCcCCCCCeEEEEEEe
Q 009127 48 QGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-T--------TCPIPPGKNFTYVLQA 118 (543)
Q Consensus 48 ~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-t--------q~~i~PG~~~~y~f~~ 118 (543)
...++| ++|||+|||++||+|+|+|+|.|+++++|||||+++. +.+||++. + ||+|+||++|+|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYS--KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCC--TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecc--cccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 345678 6899999999999999999999999999999999843 34566553 2 7999999999999999
Q ss_pred CCCc---------ccceecCCchh--hhhccceeEEEEecCCCC---CCCCCCCCCceEEEeeeeeeccHHHHHHHhccC
Q 009127 119 KDQI---------GSYFYFPSFLF--HKAAGAFGGIRIWSRPRI---PVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSG 184 (543)
Q Consensus 119 ~~~~---------Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~g 184 (543)
++++ ||||||||... |+.+||+|+|||+++... +.+. ..|+|++|+++||..... .
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~--------~- 196 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS--------W- 196 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS--------S-
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc--------c-
Confidence 6433 79999999765 889999999999987431 1122 458899999999853211 0
Q ss_pred CCCCCCCeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCc-ceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEE
Q 009127 185 HNLPFPDGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLT-TSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYS 262 (543)
Q Consensus 185 ~~~~~~~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~-~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~d 262 (543)
....++.++|||+.+ ..|.+++++|++|||||+|++.. ..|.||||||.|.+ ||. .+|++.|.||||+|
T Consensus 197 -~~~~~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dtv~l~pger~~ 267 (306)
T 1sdd_A 197 -NQTSSLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISAITLVSATSTT 267 (306)
T ss_dssp -SCCCCEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSCCCEETTCCBC
T ss_pred -ccCCCcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----EcceEEECCCcEEE
Confidence 112467899999984 23889999999999999999986 57889999999875 884 37999999999999
Q ss_pred EEEEeCCCCcceEEEEeec
Q 009127 263 VLVTMDQAPQDYYIVVSSR 281 (543)
Q Consensus 263 v~v~~~~~~g~y~i~~~~~ 281 (543)
|+|+++ .+|.|+++|+..
T Consensus 268 v~~~~~-~pG~~~~hch~~ 285 (306)
T 1sdd_A 268 ANMTVS-PEGRWTIASLIP 285 (306)
T ss_dssp ---------CCCCCBCCST
T ss_pred EEEEcC-CCeEEEEEeCCh
Confidence 999998 689999999864
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=372.91 Aligned_cols=248 Identities=13% Similarity=0.107 Sum_probs=196.1
Q ss_pred CCCeEEEEEEEEEEEe--cCCCe----------------e-EEEEEE-----CC-----------cCCCceEEEecCCEE
Q 009127 25 DSPYRFFTWKITYGDI--YPLGV----------------K-QQGILI-----NG-----------QFPGPQIDAVTNDNL 69 (543)
Q Consensus 25 ~~~~~~~~l~~~~~~~--~~~g~----------------~-~~~~~~-----Ng-----------~~pgP~i~v~~Gd~v 69 (543)
...+|+|.|.+++..+ +++|. . ..++.| ++ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 4568999999999885 56653 1 223333 23 689999999999999
Q ss_pred EEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCC---------CcccceecCCchh--hhhcc
Q 009127 70 IISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKD---------QIGSYFYFPSFLF--HKAAG 138 (543)
Q Consensus 70 ~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~---------~~Gt~wYH~H~~~--q~~~G 138 (543)
+|+|+|.|+++++|||||+++..... ||++++||+|+||++|+|+|++++ ++||||||||.+. |+.+|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999876643 699888999999999999999974 7999999999875 89999
Q ss_pred ceeEEEEecCCCCCC--CCCCCCCceEEEeeee------eeccHHHHHHHhc-cCC----C---CCCCCeEEEcCCCC-C
Q 009127 139 AFGGIRIWSRPRIPV--PFPPPAGDFTVLAGDW------YRSNHYVLRRLLD-SGH----N---LPFPDGLLINGRGW-N 201 (543)
Q Consensus 139 l~G~liV~~~~~~~~--~~~~~~~e~~l~~~d~------~~~~~~~~~~~~~-~g~----~---~~~~~~~liNG~~~-~ 201 (543)
|+|+|||+++..... ....+++|++|+++++ +++.. +..+.. ... . ....+.++|||+.+ .
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~--~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~~~ 366 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTEN--MERNCRAPCNIQMEDPTFKENYRFHAINGYIMDT 366 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGG--GSSCSCCSSCCCSSSSSSTTTSCEECTTSCTTTT
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccc--hhhcccCccccccCCccccccCCccccCCccCCC
Confidence 999999999764211 1124578999887654 33321 111110 000 0 01235689999985 3
Q ss_pred cceEEEecCCEEEEEEEEcCCc-ceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEee
Q 009127 202 GYTFTVEPGRTYRFRISNVGLT-TSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSS 280 (543)
Q Consensus 202 ~p~~~v~~G~~~rlRiiN~~~~-~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~ 280 (543)
.+.+++++|++|||||+|++.. ..|+||||||.|+|++.||. .+|++.|.||||++|+|+++ .+|.|.++|+.
T Consensus 367 ~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad-~pG~w~~hcH~ 440 (770)
T 2r7e_B 367 LPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS-KAGIWRVECLI 440 (770)
T ss_dssp CCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-SCBCCCBCCCS
T ss_pred CCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-CCCceEEEecc
Confidence 5789999999999999999864 47999999999999999974 67999999999999999999 68999999986
Q ss_pred c
Q 009127 281 R 281 (543)
Q Consensus 281 ~ 281 (543)
.
T Consensus 441 ~ 441 (770)
T 2r7e_B 441 G 441 (770)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=342.66 Aligned_cols=218 Identities=17% Similarity=0.178 Sum_probs=169.4
Q ss_pred cCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCC-----CCC-CCCcCCCCCeEEEEEEeCCCcc-----
Q 009127 55 QFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDG-----VYG-TTCPIPPGKNFTYVLQAKDQIG----- 123 (543)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG-----~p~-tq~~i~PG~~~~y~f~~~~~~G----- 123 (543)
.+|||+||+++||+|+|+|+|.++++++|||||+++. .+++|| ++. +||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 456664 565 7999999999999999975554
Q ss_pred ----cceecCCch--hhhhccceeEEEEecCCCCC-CC-CCCCCCceEEEeeeeeeccH----HHHHHHhcc-CCC-CC-
Q 009127 124 ----SYFYFPSFL--FHKAAGAFGGIRIWSRPRIP-VP-FPPPAGDFTVLAGDWYRSNH----YVLRRLLDS-GHN-LP- 188 (543)
Q Consensus 124 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~~~d~~~~~~----~~~~~~~~~-g~~-~~- 188 (543)
|||||||.. .|+.+||+|+|||+++.... .. ....|+|++|++++|..+.+ ..+..+... ... ..
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~~~~~~p~~v~~~~ 606 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLED 606 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHHHHSSSSSCSCCCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchhhcccCchhccccc
Confidence 999999976 47899999999999875321 11 11458999999975432211 112222110 000 00
Q ss_pred -----CCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCc-ceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEE
Q 009127 189 -----FPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLT-TSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYS 262 (543)
Q Consensus 189 -----~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~-~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~d 262 (543)
....++|||+.+....+++++||+|||||+|+++. ..|.|||+||.|+|+ +..+|++.|.||||++
T Consensus 607 ~~~~~~~~~~~ING~~~~~~~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~Pg~~~~ 678 (742)
T 2r7e_A 607 PEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFPFSGET 678 (742)
T ss_dssp HHHHGGGCCBCTTTTCSSCCCCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSSCCCCCSSEE
T ss_pred ccccccCceeeecCcCCCCCcEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEEEECCCcEEE
Confidence 01247899998523348999999999999998763 468999999999986 5778999999999999
Q ss_pred EEEEeCCCCcceEEEEeecc
Q 009127 263 VLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 263 v~v~~~~~~g~y~i~~~~~~ 282 (543)
|+|+++ .+|.|.++|+...
T Consensus 679 v~~~ad-~pG~w~~hcH~~~ 697 (742)
T 2r7e_A 679 VFMSME-NPGLWILGCHNSD 697 (742)
T ss_dssp CCEECC-CCCCSCCEECCCS
T ss_pred EEEEcC-CCeEEEEEeCCch
Confidence 999998 6899999998754
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=258.45 Aligned_cols=228 Identities=16% Similarity=0.153 Sum_probs=165.7
Q ss_pred CCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCC
Q 009127 190 PDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ 269 (543)
Q Consensus 190 ~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 269 (543)
...+++||+.. .|.|+++.|+++++++.|.... .+.+|+||.. ..+.||.+. .+...|.|||++++.++++
T Consensus 54 ~~~~~~ng~~p-gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~- 124 (288)
T 3gdc_A 54 FKGWSYNGRIP-GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDAT- 124 (288)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECC-
T ss_pred EEEEEECCccC-CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcC-
Confidence 46899999974 6899999999999999999875 7889999975 456788763 2445789999999999997
Q ss_pred CCcceEEEEeeccC-CC-ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCccccc
Q 009127 270 APQDYYIVVSSRFT-PR-VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIK 347 (543)
Q Consensus 270 ~~g~y~i~~~~~~~-~~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 347 (543)
.+|.||++++.... .+ .....+.|.+..... .+..
T Consensus 125 ~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~--------~~~~----------------------------------- 161 (288)
T 3gdc_A 125 PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG--------RPPA----------------------------------- 161 (288)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECSSC--------CCCC-----------------------------------
T ss_pred CCccEEEEecCcchHHHHhCcCeEEEEEeCCcc--------CCCC-----------------------------------
Confidence 79999999986421 01 122334444432210 0000
Q ss_pred ceEEEEEecc---CCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEE
Q 009127 348 ISRTITLANS---APYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEI 424 (543)
Q Consensus 348 ~~~~~~~~~~---~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 424 (543)
++++.+... .........|.|||+.|.. . ...++++.|++++|
T Consensus 162 -d~e~~l~~~d~~~~~g~~~~~~~iNG~~~~~-----~----------------------------~~~l~v~~Ge~vr~ 207 (288)
T 3gdc_A 162 -DDEMVMVMNGYNTDGGDDNEFYSVNGLPFHF-----M----------------------------DFPVKVKQHELVRI 207 (288)
T ss_dssp -SEEEEEEEEEECCSSTTCCSEEEETTSTTHH-----H----------------------------HSCEEEETTCCEEE
T ss_pred -cceEEEEEeeEecCCCCCcceEEECcccccc-----c----------------------------CcccccCCCCEEEE
Confidence 011111000 0000112358999987631 0 01245788999999
Q ss_pred EEEeCCCC--CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhh
Q 009127 425 VFQNWEDT--VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQ 502 (543)
Q Consensus 425 ~i~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~He 502 (543)
.|.|.+.. .||||||||.|+|++.+.. +..+.++||+.|+|++++.|+|++++||.|+||||+++|+
T Consensus 208 ~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~ 276 (288)
T 3gdc_A 208 HLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFA 276 (288)
T ss_dssp EEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHH
T ss_pred EEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHH
Confidence 99999754 5999999999999975431 2235799999999999999999999999999999999999
Q ss_pred hcccEEEEEEec
Q 009127 503 YLGQQFYLRVYS 514 (543)
Q Consensus 503 d~GMm~~~~V~~ 514 (543)
+.|||+.|+|.+
T Consensus 277 ~~GM~~~~~V~~ 288 (288)
T 3gdc_A 277 ELGWMGFFEVSA 288 (288)
T ss_dssp TTTCEEEEEEEC
T ss_pred hcCCCEEEEEeC
Confidence 999999999964
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=251.09 Aligned_cols=246 Identities=16% Similarity=0.160 Sum_probs=169.0
Q ss_pred CeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEE-EEEcCccccccccCeEEEcCCCeEEEEEEeCC
Q 009127 191 DGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKL-VEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ 269 (543)
Q Consensus 191 ~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~v-ia~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 269 (543)
..+++||+.. .|.|+++.|+++++|+.|.... .+.+|+||....- .+.||.+. +....|.|||+++..++++
T Consensus 23 ~~~~~ng~~p-GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~- 95 (318)
T 3g5w_A 23 HTFAFNGQVP-APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAE- 95 (318)
T ss_dssp EEEEETTBSS-CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECC-
T ss_pred EEEEECCccC-CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcC-
Confidence 5799999964 7999999999999999999875 6889999986542 35788753 2346789999999999998
Q ss_pred CCcceEEEEeeccCCCc--cceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCccccc
Q 009127 270 APQDYYIVVSSRFTPRV--LTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIK 347 (543)
Q Consensus 270 ~~g~y~i~~~~~~~~~~--~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 347 (543)
.+|+||.+++.....+. ....+.|.+..... .+.+.....+....+. .+...... .....
T Consensus 96 ~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~---~~~~~~~d~e~~l~l~-----dw~~~~~~-~~~~~--------- 157 (318)
T 3g5w_A 96 PAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNP---LPIEKTVTKDYILMLS-----DWVSSWAN-KPGEG--------- 157 (318)
T ss_dssp SCEEEEEECCSSHHHHHHHSCCEEEEEEECSSC---CHHHHTCCEEEEEEEE-----EECGGGTT-CTTCC---------
T ss_pred CCEEEEEEccCChhhhhccCCCEEEEEEcCCCc---ccccccccceeEEEEE-----eecccccc-ccccC---------
Confidence 69999999986321110 12334444432211 0000000000000000 01000000 00000
Q ss_pred ceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEE
Q 009127 348 ISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQ 427 (543)
Q Consensus 348 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 427 (543)
.. .......|.|||+.|.. ...+.++.|++++|+|.
T Consensus 158 --------~~--~~~~~d~~~ING~~~~~----------------------------------~~~l~v~~G~~vrlrli 193 (318)
T 3g5w_A 158 --------GI--PGDVFDYYTINAKSFPE----------------------------------TQPIRVKKGDVIRLRLI 193 (318)
T ss_dssp --------CC--TTCCCCEEEETTBCBTS----------------------------------SCCEEECTTCEEEEEEE
T ss_pred --------CC--CCCcCcEEEEcCcCCCC----------------------------------CccEEeCCCCEEEEEEE
Confidence 00 00012358999987621 01256789999999999
Q ss_pred eCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhhh----
Q 009127 428 NWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQY---- 503 (543)
Q Consensus 428 N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed---- 503 (543)
|.+...||||||||+|+|++++++. +.+|.++||+.|+|++++.|+|+++|||.|+||||+++|++
T Consensus 194 N~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~ 263 (318)
T 3g5w_A 194 GAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDK 263 (318)
T ss_dssp ECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTB
T ss_pred eCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCc
Confidence 9988899999999999999986532 22467899999999999999999999999999999999998
Q ss_pred --cccEEEEEEecC
Q 009127 504 --LGQQFYLRVYSP 515 (543)
Q Consensus 504 --~GMm~~~~V~~p 515 (543)
.|||..++|...
T Consensus 264 ~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 264 PDGGIMTTIEYEEV 277 (318)
T ss_dssp SSCBSEEEEEETTT
T ss_pred CCCCCEEEEEECCC
Confidence 689999999654
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=251.24 Aligned_cols=245 Identities=16% Similarity=0.153 Sum_probs=165.2
Q ss_pred CCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEE---cCccccccccCeEEEcCCCeEEEEEE
Q 009127 190 PDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEV---EGSHTLQNTYAALDIHLGQTYSVLVT 266 (543)
Q Consensus 190 ~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~---DG~~~~p~~~~~v~l~pgeR~dv~v~ 266 (543)
...+++||+.. .|.|++++|+++|+|++|.... .+.+|.|| +.+.+. ||.+. ++...|.||||+++.|+
T Consensus 23 ~~~~~~NG~~p-GP~I~v~~Gd~v~v~v~N~l~~-~~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~ 94 (339)
T 2zwn_A 23 YKVFGFNGQVP-GPLIHVQEGDDVIVNVTNNTSL-PHTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFK 94 (339)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEEESSS-CBCCEEET--CCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEE
T ss_pred EEEEEECCccC-CCeEEEECCCEEEEEEEECCCC-CccEEeCC--CCcCCCcccCCCCc----cccCccCCCCeEEEEEE
Confidence 35799999953 7999999999999999999975 45555555 555554 99763 34567999999999999
Q ss_pred eCCCCcceEEEEeeccCCC-c-cceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcc
Q 009127 267 MDQAPQDYYIVVSSRFTPR-V-LTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYG 344 (543)
Q Consensus 267 ~~~~~g~y~i~~~~~~~~~-~-~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 344 (543)
++ .+|+||++++.....+ . ....+.+.+..... ..++.....+....+. ++..... ..+...
T Consensus 95 ~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~---~~~~~~~d~e~~l~l~-----d~~~~~~-~~~~~~------ 158 (339)
T 2zwn_A 95 AD-RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQP---LPIEKRVTKDVIMMMS-----TWESAVA-DKYGEG------ 158 (339)
T ss_dssp CC-SCEEEEEECCSSHHHHTTTSCCEEEEEEECSSC---CTTGGGCSEEEEEEEE-----EECGGGT-TCTTCC------
T ss_pred CC-CCEEEEEEecCCchhhhhcCCceEeEEecCCCc---ccccccCCceEEEEee-----heecccc-cccCCC------
Confidence 98 6999999987532111 1 12233333322211 0111100000000000 0111000 000000
Q ss_pred cccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEE
Q 009127 345 MIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEI 424 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 424 (543)
. . .......|.|||+.|.. ...+.++.|++++|
T Consensus 159 --g--------~---~~~~~~~~~ING~~~~~----------------------------------~~~~~v~~G~~vrl 191 (339)
T 2zwn_A 159 --G--------T---PMNVADYFSVNAKSFPL----------------------------------TQPLRVKKGDVVKI 191 (339)
T ss_dssp --C--------S---TTSCCCEEEETTBCTTS----------------------------------SCCEEECTTCEEEE
T ss_pred --C--------C---CccccceEEEccccCCC----------------------------------cccEEECCCCEEEE
Confidence 0 0 00012358899986521 11256788999999
Q ss_pred EEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhh---
Q 009127 425 VFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWAR--- 501 (543)
Q Consensus 425 ~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~H--- 501 (543)
+|.|.+...||||||||+|+|++.++.. +.+|.++||+.|++++++.|+|++|+||.|++|||+++|
T Consensus 192 rliN~~~~~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~ 261 (339)
T 2zwn_A 192 RFFGAGGGIHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTA 261 (339)
T ss_dssp EEEECSSSCEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCB
T ss_pred EEEeCCCceEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhccc
Confidence 9999988899999999999999996532 223678999999999999999999999999999999999
Q ss_pred ---hhcccEEEEEEecC
Q 009127 502 ---QYLGQQFYLRVYSP 515 (543)
Q Consensus 502 ---ed~GMm~~~~V~~p 515 (543)
++.|||+.++|...
T Consensus 262 ~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 262 GGKHPGGPITVIEYDGV 278 (339)
T ss_dssp TTBSSCSSEEEEEETTS
T ss_pred ccccCCCcEEEEEECCC
Confidence 88999999999654
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6e-28 Score=238.88 Aligned_cols=222 Identities=13% Similarity=0.064 Sum_probs=162.9
Q ss_pred EEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCC--
Q 009127 193 LLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQA-- 270 (543)
Q Consensus 193 ~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~-- 270 (543)
...||+.. .|.|+++.|+++++++.|... ....+|.||..+.. ..||.+ +..-.|.||+++...++++++
T Consensus 27 ~~~ng~~p-GP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~ 98 (276)
T 3kw8_A 27 EKGKASVP-GPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGR 98 (276)
T ss_dssp STTCCBSS-CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEE
T ss_pred eccCCccc-CCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccc
Confidence 34688864 799999999999999999976 47889999987654 478876 233568999999999999752
Q ss_pred ----------CcceEEEEeeccCC----C-ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCC
Q 009127 271 ----------PQDYYIVVSSRFTP----R-VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRP 335 (543)
Q Consensus 271 ----------~g~y~i~~~~~~~~----~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~ 335 (543)
+|.||.+++..... + .....+.|....... +
T Consensus 99 ~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~---------~------------------------- 144 (276)
T 3kw8_A 99 RDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD---------V------------------------- 144 (276)
T ss_dssp CTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------C-------------------------
T ss_pred cccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCC---------c-------------------------
Confidence 57899998753211 1 112233333321110 0
Q ss_pred CCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEe
Q 009127 336 NPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMA 415 (543)
Q Consensus 336 ~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 415 (543)
..++++.+.. ..|.|||+.|.. ...+.
T Consensus 145 -----------~~drE~~l~l--------~~~~iNG~~~~~----------------------------------~p~i~ 171 (276)
T 3kw8_A 145 -----------LPDATHTIVF--------NDMTINNRKPHT----------------------------------GPDFE 171 (276)
T ss_dssp -----------CCSEEEEEEE--------ETTEETTCCTTC----------------------------------CCCEE
T ss_pred -----------ccccceEEEe--------cccccceecccC----------------------------------CCCEE
Confidence 0123333322 127999987631 11256
Q ss_pred cCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEec---Ccccc
Q 009127 416 ANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALD---NVGMW 492 (543)
Q Consensus 416 ~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ad---npG~w 492 (543)
++.|++++|+|.|.+.+.||||||||.|++++.| .+... ...+.++||+.|+|++++.++|+++ |||.|
T Consensus 172 v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G--~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w 243 (276)
T 3kw8_A 172 ATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTG--ILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 243 (276)
T ss_dssp EETTCEEEEEEEEESSCCEEEEETTCCEESSSSS--SCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred EecCCEEEEEEecCCCcceeEEEccceeEEeccC--ccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeE
Confidence 7899999999999988899999999999997643 23211 1124689999999999999999997 89999
Q ss_pred eeeecchhhhhcccEEEEEEecCCC
Q 009127 493 NIRSENWARQYLGQQFYLRVYSPAN 517 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~p~~ 517 (543)
+||||+++|++.|||+.|.|.+++.
T Consensus 244 ~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 244 MYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEECCCchHhhCCCeEEEEEeCCCC
Confidence 9999999999999999999998864
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=238.73 Aligned_cols=220 Identities=14% Similarity=0.083 Sum_probs=155.8
Q ss_pred EcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCC-----
Q 009127 195 INGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ----- 269 (543)
Q Consensus 195 iNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~----- 269 (543)
.||..- .|.|+++.|+++++++.|.... ...+|.||..+. -+.||.++ ..-.|.|||++...++++.
T Consensus 51 ~~gt~P-GP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~-----~~~~i~PG~t~~Y~~~~~~~~~~~ 122 (299)
T 3t9w_A 51 GGATVP-GPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLM-----NGSAVMPGQTRRYTWRSHVGYRRA 122 (299)
T ss_dssp TCCBSS-CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCCBCTTCEEEEEEBCCCCEECT
T ss_pred CCCCcc-CceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCcc-----ccCccCCCCeEEEEEEeecccccC
Confidence 367653 6999999999999999999875 678899997654 25688653 2225789999999988752
Q ss_pred -------CCcceEEEEeeccCCC-----ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCC
Q 009127 270 -------APQDYYIVVSSRFTPR-----VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNP 337 (543)
Q Consensus 270 -------~~g~y~i~~~~~~~~~-----~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p 337 (543)
.+|.||.+++...... .....+.|...... .
T Consensus 123 ~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~---------~---------------------------- 165 (299)
T 3t9w_A 123 DGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQG---------D---------------------------- 165 (299)
T ss_dssp TSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT---------C----------------------------
T ss_pred CCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccc---------c----------------------------
Confidence 4688999886532111 01122333222110 0
Q ss_pred CCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecC
Q 009127 338 QGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAAN 417 (543)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 417 (543)
...++++.+.. ..|.+|++.+. + ...+.++
T Consensus 166 --------~~~d~e~~l~~--------~~~~~Ng~~~~--~--------------------------------~p~l~v~ 195 (299)
T 3t9w_A 166 --------LLPKRQFTVVF--------NDMMINNRAHH--D--------------------------------APTFEAN 195 (299)
T ss_dssp --------CCCSEEEEEEE--------ETTEETTCCTT--C--------------------------------CCEEEEE
T ss_pred --------cCccccceeee--------eeeeecCcccc--c--------------------------------cccceec
Confidence 01133443332 12778887552 1 1235678
Q ss_pred CCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEE---EEecCccccee
Q 009127 418 FREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIY---MALDNVGMWNI 494 (543)
Q Consensus 418 ~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~ir---f~adnpG~w~~ 494 (543)
.|++++|+|.|.+...||||||||.|+|+..+..... ...+.++||+.|.|++...++ |+++|||.|+|
T Consensus 196 ~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~~~--------~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~ 267 (299)
T 3t9w_A 196 LGERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTSE--------YDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMY 267 (299)
T ss_dssp TTCEEEEEEEEESSCCCEEEETTCCEESSSSSSCCST--------TCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEE
T ss_pred CCCEEEEEEEeccccceeeeEecceEEEEecccccCC--------cCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEE
Confidence 9999999999999899999999999999887653222 223568999999999766554 45689999999
Q ss_pred eecchhhhhcccEEEEEEecCCC
Q 009127 495 RSENWARQYLGQQFYLRVYSPAN 517 (543)
Q Consensus 495 HCHil~Hed~GMm~~~~V~~p~~ 517 (543)
||||++|++.|||+.|+|.+.+.
T Consensus 268 HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 268 HCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp EECSHHHHHTTCEEEEEEECTTS
T ss_pred EcCCHHHHhcCCeEEEEEECCCC
Confidence 99999999999999999988763
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=233.38 Aligned_cols=215 Identities=13% Similarity=0.091 Sum_probs=154.2
Q ss_pred cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCC------------
Q 009127 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ------------ 269 (543)
Q Consensus 202 ~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~------------ 269 (543)
.|.|+++.|++++++|.|.... ...+|.||..+.. +.||.+. ..-.|.||+++...+++..
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCCC-CccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 6999999999999999999875 6788999976542 4688653 2235899999999887652
Q ss_pred CCcceEEEEeeccCCC-----ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcc
Q 009127 270 APQDYYIVVSSRFTPR-----VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYG 344 (543)
Q Consensus 270 ~~g~y~i~~~~~~~~~-----~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 344 (543)
..|.||.+++.....+ .....+.|.+.....
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~-------------------------------------------- 149 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-------------------------------------------- 149 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--------------------------------------------
T ss_pred CceEEEEeecCcccccchhhhhccccCceEeecccc--------------------------------------------
Confidence 3588899886532211 012223333321100
Q ss_pred cccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEE
Q 009127 345 MIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEI 424 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 424 (543)
...++++.+.. ..|++|+..+.. ...+.++.|++++|
T Consensus 150 -~~~d~e~~l~~--------~d~t~Ng~~~~~----------------------------------~~~l~v~~Ge~vr~ 186 (313)
T 3tas_A 150 -VLPDRTHTIVF--------NDMTINNRPAHT----------------------------------GPDFEATVGDRVEF 186 (313)
T ss_dssp -BCCSEEEEEEE--------ETTEETTCCTTC----------------------------------CCCEEEETTCEEEE
T ss_pred -ccccccceeec--------cchhcccCCccc----------------------------------ccccccccCCEEEE
Confidence 01133443332 127888875421 11256788999999
Q ss_pred EEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe---cCcccceeeecchhh
Q 009127 425 VFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMAL---DNVGMWNIRSENWAR 501 (543)
Q Consensus 425 ~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a---dnpG~w~~HCHil~H 501 (543)
+|.|.+.+.||||||||.|+|+..+.... ....+.++||+.|.|++.+.+++.+ +|||.|+||||+++|
T Consensus 187 ~liN~g~~~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H 258 (313)
T 3tas_A 187 VMITHGEYYHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSH 258 (313)
T ss_dssp EEEEESSCCEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHH
T ss_pred EEecccccceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHH
Confidence 99999989999999999999988764321 1234679999999999998887764 689999999999999
Q ss_pred hhcccEEEEEEecCCCC
Q 009127 502 QYLGQQFYLRVYSPANS 518 (543)
Q Consensus 502 ed~GMm~~~~V~~p~~~ 518 (543)
++.|||+.|+|.+++..
T Consensus 259 ~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 259 SDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp HHTTCEEEEEEECTTCC
T ss_pred HHCCCeEEEEEECCCCC
Confidence 99999999999988753
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-25 Score=222.45 Aligned_cols=233 Identities=14% Similarity=0.083 Sum_probs=138.7
Q ss_pred eEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcccc----ccccCeEEEcCCCeEEEEEEe
Q 009127 192 GLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTL----QNTYAALDIHLGQTYSVLVTM 267 (543)
Q Consensus 192 ~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~----p~~~~~v~l~pgeR~dv~v~~ 267 (543)
..++||.. .|.|++++|+++++|+.|... ..+.+|.||..+.. +.||.+.. +...+...|.||||++..+++
T Consensus 51 ~~~~n~~p--GP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 51 QSRTSGLL--GPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCSSCCSC--CCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred ccccCCcc--CCEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 35689888 899999999999999999876 47888888887432 57887652 223335689999999999999
Q ss_pred CCCC---------cceEEEEeeccCC---CccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCC
Q 009127 268 DQAP---------QDYYIVVSSRFTP---RVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRP 335 (543)
Q Consensus 268 ~~~~---------g~y~i~~~~~~~~---~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~ 335 (543)
++.+ |+||++++..... ..+.+ ++|........ ..+.+.. .+ +.+..-+.
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G-~liV~~~~~~~-~~~~~~~--~d--------~e~~l~~~------ 188 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIG-PLLICKKGTLT-EDGTQKM--FE--------KQHVLMFA------ 188 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCE-EEEEECTTCBC-TTSSBSS--SC--------CCCCCBCC------
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceE-EEEEccCCCCC-ccCCcCc--cc--------ceEEEEEE------
Confidence 7643 6999999753211 12223 33333221100 0000000 00 00000000
Q ss_pred CCCCCCCcccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEe
Q 009127 336 NPQGSYHYGMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMA 415 (543)
Q Consensus 336 ~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 415 (543)
.+.-.. .-.......+.|||+.|.. .| .+.
T Consensus 189 ---------------d~d~~~-~~~~~~~~~~~ING~~~~~--~p--------------------------------~l~ 218 (306)
T 1sdd_A 189 ---------------VFDESK-SWNQTSSLMYTVNGYVNGT--MP--------------------------------DIT 218 (306)
T ss_dssp ---------------EEETTS-SSSCCCCEEECSSSCCSSC--CC--------------------------------CCC
T ss_pred ---------------eccccc-ccccCCCcceeeCCEecCC--Cc--------------------------------ceE
Confidence 000000 0000112357888876521 11 134
Q ss_pred cCCCcEEEEEEEeCCCC--CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccce
Q 009127 416 ANFREFVEIVFQNWEDT--VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWN 493 (543)
Q Consensus 416 ~~~g~~v~~~i~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~ 493 (543)
++.|++++|+|.|.+.. .||||+|||.|++ .| .++||+.|.|++.+.|+|++++||.|+
T Consensus 219 v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~ 279 (306)
T 1sdd_A 219 VCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWT 279 (306)
T ss_dssp CCCC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCC
T ss_pred EcCCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEE
Confidence 67899999999999764 6999999999986 11 358999999999999999999999999
Q ss_pred eeecchhhhhcccEEEEEEecC
Q 009127 494 IRSENWARQYLGQQFYLRVYSP 515 (543)
Q Consensus 494 ~HCHil~Hed~GMm~~~~V~~p 515 (543)
||||+++|++.|||+.|+|.+.
T Consensus 280 ~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 280 IASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CBCCSTTTGGGTCBCCC-----
T ss_pred EEeCChHHHhcCCeEEEEEecC
Confidence 9999999999999999999753
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.2e-22 Score=219.28 Aligned_cols=244 Identities=16% Similarity=0.189 Sum_probs=148.5
Q ss_pred cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccc----cccCeEEEcCCCeEEEEEEeCCC-----Cc
Q 009127 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQ----NTYAALDIHLGQTYSVLVTMDQA-----PQ 272 (543)
Q Consensus 202 ~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p----~~~~~v~l~pgeR~dv~v~~~~~-----~g 272 (543)
.|.|++++|+++++|+.|.... .+.+|.||.... .+.||.+... ..+....|.|||+++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 7999999999999999999875 678888887764 4789987421 22335679999999999999864 57
Q ss_pred ----ceEEEEeeccCCC---ccceEEEEEecCCCCCCCCCCCCCCCCcccccccccc-ccccccCCCCCCCCCCCCCCcc
Q 009127 273 ----DYYIVVSSRFTPR---VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQAR-SIRWNLTASGPRPNPQGSYHYG 344 (543)
Q Consensus 273 ----~y~i~~~~~~~~~---~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~-~~~~~l~~~~~~~~p~~~~~~~ 344 (543)
+||.+++.....+ .+.+.-|+.-.+.... ....|.. ..+....+.... ...+.+. ....
T Consensus 146 ~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~-~~~~~~~-~~e~~l~l~~~d~~~~w~~~-----~~~~------ 212 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDK-ETNMPVD-MREFVLLFMVFDEKKSWYYD-----KKPT------ 212 (647)
T ss_dssp CSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCT-TSCCCSS-CCEEEEEEEEEEGGGSSCCC---------------
T ss_pred CCceEEEEccCCCCcccccccCccCEEEeeCCCccc-ccCCCCc-ceeEEEEEEeecCccccccc-----cCcc------
Confidence 9999998632111 2233223333222110 0001110 011110110000 0001110 0000
Q ss_pred cccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEE
Q 009127 345 MIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEI 424 (543)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~ 424 (543)
..+.... .........+.|||+.|. .| .+.++.|++++|
T Consensus 213 -----~~~~~~~-~~~~~~~~~~~iNG~~~~---~p--------------------------------~l~v~~G~~vrl 251 (647)
T 1sdd_B 213 -----RSWRRAS-SEVKNSHEFHAINGMIYN---LP--------------------------------GLRMYEQEWVRL 251 (647)
T ss_dssp -----------------CCCEEEEETTBSSC---CC--------------------------------CCEEETTCEEEE
T ss_pred -----cccccCC-cchhhcCceeccCCEecC---CC--------------------------------CeEEcCCCEEEE
Confidence 0000000 000111345889998761 11 134678999999
Q ss_pred EEEeCCC--CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhh
Q 009127 425 VFQNWED--TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQ 502 (543)
Q Consensus 425 ~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~He 502 (543)
+|.|.+. +.||||+|||.|+|++.+ +.++||+.|.|++++.|+|++++||.|+||||+++|+
T Consensus 252 rliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~ 315 (647)
T 1sdd_B 252 HLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQ 315 (647)
T ss_dssp EEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHHHH
T ss_pred EEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCccccc
Confidence 9999875 479999999999998652 3478999999999999999999999999999999999
Q ss_pred hcccEEEEEEecCCC
Q 009127 503 YLGQQFYLRVYSPAN 517 (543)
Q Consensus 503 d~GMm~~~~V~~p~~ 517 (543)
+.|||+.|.|.++++
T Consensus 316 ~~Gm~~~~~V~~~~c 330 (647)
T 1sdd_B 316 RAGMQTPFLIVDREC 330 (647)
T ss_dssp TTTCEEEEEEECTTC
T ss_pred ccccccceeeecccc
Confidence 999999999976543
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7e-22 Score=200.14 Aligned_cols=246 Identities=16% Similarity=0.110 Sum_probs=163.2
Q ss_pred CeEEEcCCCCCcceEEEecCCEEEEEEEEcCCc-ceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCC
Q 009127 191 DGLLINGRGWNGYTFTVEPGRTYRFRISNVGLT-TSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ 269 (543)
Q Consensus 191 ~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~-~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~ 269 (543)
..+++||+.. .|.+++++|+++++|++|.... ..+.+|+||.. +.||... ...|.|||++++.++++
T Consensus 59 ~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~y~f~~~- 126 (327)
T 1kbv_A 59 RYWTFDGDVP-GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTSTFSFKAL- 126 (327)
T ss_dssp EEEEETTBSS-CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEEEEEECC-
T ss_pred EEEEECCccC-CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEEEEEECC-
Confidence 5799999953 7999999999999999999753 47888998863 4687642 12489999999999998
Q ss_pred CCcceEEEEeeccC-CC-ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCccccc
Q 009127 270 APQDYYIVVSSRFT-PR-VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMIK 347 (543)
Q Consensus 270 ~~g~y~i~~~~~~~-~~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 347 (543)
.+|+||++++.... .+ .....+.+.+.... ++|. .+....+-. -++...... .. . +...
T Consensus 127 ~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~-----~~p~---~d~e~~l~~---~d~~~~~~~--~~-~-----g~~~ 187 (327)
T 1kbv_A 127 QPGLYIYHCAVAPVGMHIANGMYGLILVEPKE-----GLPK---VDKEFYIVQ---GDFYTKGKK--GA-Q-----GLQP 187 (327)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC---CSEEEEEEE---EEECBSSCT--TC-C-----EEEC
T ss_pred CCeEEEEEeCCCChhhhhhcceEEEEEEecCC-----CCCC---CceEEEEEe---eeeeccCcc--cc-c-----cccc
Confidence 48999999875211 01 11223333333321 1221 111100000 011111000 00 0 0000
Q ss_pred ceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEE
Q 009127 348 ISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQ 427 (543)
Q Consensus 348 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 427 (543)
.+ +.... .. ....+.|||+.+... ....++++.|++++|+|.
T Consensus 188 ~~----~~~~~-~~-~~~~~~iNG~~~~~~--------------------------------~~~~l~v~~G~~vRlRli 229 (327)
T 1kbv_A 188 FD----MDKAV-AE-QPEYVVFNGHVGALT--------------------------------GDNALKAKAGETVRMYVG 229 (327)
T ss_dssp BC----HHHHH-HT-CCSEEEETTSTTTTS--------------------------------GGGCEEEETTEEEEEEEE
T ss_pred cC----hhHhc-cC-CCceEEEcCcccCCC--------------------------------CceeEEeCCCCEEEEEEE
Confidence 00 00000 01 123578898865210 012356788999999999
Q ss_pred eCCC-CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhh-hcc
Q 009127 428 NWED-TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQ-YLG 505 (543)
Q Consensus 428 N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~He-d~G 505 (543)
|.+. ..|+||||||+|+||+.+++.. .|.++|++.|.+|+.+.|.|++++||.|++|||+++|. ..|
T Consensus 230 N~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g 298 (327)
T 1kbv_A 230 NGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKG 298 (327)
T ss_dssp EEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSS
T ss_pred CCCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCC
Confidence 9864 6799999999999999976522 25789999999999999999999999999999999995 889
Q ss_pred cEEEEEEecCC
Q 009127 506 QQFYLRVYSPA 516 (543)
Q Consensus 506 Mm~~~~V~~p~ 516 (543)
|++.++|....
T Consensus 299 ~~a~l~~~g~~ 309 (327)
T 1kbv_A 299 ALGQLKVEGAE 309 (327)
T ss_dssp CEEEEEEESCC
T ss_pred cEEEEEECCCC
Confidence 99999997654
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-21 Score=196.22 Aligned_cols=259 Identities=12% Similarity=0.088 Sum_probs=156.3
Q ss_pred CCeEEEcCCCCCcceEEEecCCEEEEEEEEcCC-cceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeC
Q 009127 190 PDGLLINGRGWNGYTFTVEPGRTYRFRISNVGL-TTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMD 268 (543)
Q Consensus 190 ~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~-~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 268 (543)
...+++||+.. .|.|++++|+++|+|+.|... ...|.+++++... +.||.. . . .|.|||++++.++++
T Consensus 59 ~~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~---~--~--~i~PG~~~~y~~~~~ 127 (340)
T 2bw4_A 59 IHAMTFNGSVP-GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGA---L--T--QVNPGEETTLRFKAT 127 (340)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGG---G--C--CBCTTEEEEEEEECC
T ss_pred EEEEEECCCCC-CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCcc---c--e--EeCCCCEEEEEEECC
Confidence 46799999953 699999999999999999873 2456777777542 223322 2 1 399999999999998
Q ss_pred CCCcceEEEEeeccC--CC-ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCC-cc
Q 009127 269 QAPQDYYIVVSSRFT--PR-VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYH-YG 344 (543)
Q Consensus 269 ~~~g~y~i~~~~~~~--~~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~-~~ 344 (543)
.+|+||++++.... .+ .....+.+.+...... ....+.....+.+..+. .-.+.+. ..+.+.+. +.
T Consensus 128 -~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~-~~~~~~p~~~d~e~~l~---l~D~~~~-----~~~~g~~~~~~ 197 (340)
T 2bw4_A 128 -KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGL-KDEKGQPLTYDKIYYVG---EQDFYVP-----KDEAGNYKKYE 197 (340)
T ss_dssp -SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCE-ECTTSCEECCSEEEEEE---EEEECCC-----BCTTSCBCCCC
T ss_pred -CCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCc-ccccCCCcCcceeEEEe---eeeeeec-----cccCCcccccc
Confidence 49999999986321 11 0122232322222110 00000000011100000 0011110 00000000 00
Q ss_pred c-c-cceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEE
Q 009127 345 M-I-KISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFV 422 (543)
Q Consensus 345 ~-~-~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v 422 (543)
. . ...... .. . .......|.|||+.|.... ...++++.|+++
T Consensus 198 ~~~~~~~~~~--~~-~-~~~~~~~~~iNG~~~~~~~--------------------------------~~~l~v~~G~r~ 241 (340)
T 2bw4_A 198 TPGEAYEDAV--KA-M-RTLTPTHIVFNGAVGALTG--------------------------------DHALTAAVGERV 241 (340)
T ss_dssp SHHHHHHHHH--HH-H-HTTCCSEEEETTSTTTTSG--------------------------------GGCEEEETTCEE
T ss_pred cccccccchh--hH-h-hcCCCCEEEECCccCCccC--------------------------------CCceEcCCCCEE
Confidence 0 0 000000 00 0 0001235889998762100 123567889999
Q ss_pred EEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCC-CcceeEEeCCCCEEEEEEEecCcccceeeecch-h
Q 009127 423 EIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDT-VARSTTQVYPRSWTAIYMALDNVGMWNIRSENW-A 500 (543)
Q Consensus 423 ~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p-~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil-~ 500 (543)
+|++.|.+...|++|+|||.|+|+. +++ +. ..| .++||+.|.+|+.+.|.|++++||.|+||||++ +
T Consensus 242 Rl~n~~~~~~~~~~~i~gh~~~Vi~-dG~-~~---------~~p~~~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~~ 310 (340)
T 2bw4_A 242 LVVHSQANRDTRPHLIGGHGDYVWA-TGK-FR---------NPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLIE 310 (340)
T ss_dssp EEEEEESSSCBCEEEETCCEEEEET-TCC-TT---------SCCEEEESCCCBCTTEEEEEEEECCSCEEEEEEESSHHH
T ss_pred EEEECCCCCccceEEecCcceEEeC-CCc-cc---------CCccccceEEEeCCCceEEEEEECCCCeeeEEEcCchHH
Confidence 9988888778899999999999986 322 21 112 257999999999999999999999999999999 6
Q ss_pred hhhcccEEEEEEecCC
Q 009127 501 RQYLGQQFYLRVYSPA 516 (543)
Q Consensus 501 Hed~GMm~~~~V~~p~ 516 (543)
|++.|||+.|+|....
T Consensus 311 h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 311 AFELGAAGHFKVTGEW 326 (340)
T ss_dssp HHTTSCEEEEEEESCC
T ss_pred HHhCCCEEEEEECCCC
Confidence 9999999999998654
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=99.86 E-value=7.4e-23 Score=227.67 Aligned_cols=245 Identities=12% Similarity=0.077 Sum_probs=153.0
Q ss_pred cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCC---------CCc
Q 009127 202 GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQ---------APQ 272 (543)
Q Consensus 202 ~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~---------~~g 272 (543)
.|.|+++.|+++++++.|.... .+.+|.||..+..-.-||.+- ....|.||++++..+++++ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQASR-PYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSSS-CCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCCC-CcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 6999999999999999999874 778888887655443357642 2246899999999999885 579
Q ss_pred ceEEEEeeccCCC-ccceEEEEEecCCCCCCCCCCCCCCCCcccccccccc---c--cccccCCCCCCCCCCCCCCcccc
Q 009127 273 DYYIVVSSRFTPR-VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQAR---S--IRWNLTASGPRPNPQGSYHYGMI 346 (543)
Q Consensus 273 ~y~i~~~~~~~~~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~---~--~~~~l~~~~~~~~p~~~~~~~~~ 346 (543)
.||.+++.....+ .....|.|.+...........+.....+....+.... . +..++.... ..|.. ...
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~--~~p~~-~~~--- 345 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNC--RAPCN-IQM--- 345 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCS--CCSSC-CCS---
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcc--cCccc-ccc---
Confidence 9999987643211 1122333333322211000000000000000000000 0 000000000 00000 000
Q ss_pred cceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEE
Q 009127 347 KISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVF 426 (543)
Q Consensus 347 ~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i 426 (543)
.+. ........|.|||+.|. + ...+.++.|++++|+|
T Consensus 346 -~d~--------~~~~~~~~~~ING~~~~--~--------------------------------~~~l~v~~Ge~vr~rl 382 (770)
T 2r7e_B 346 -EDP--------TFKENYRFHAINGYIMD--T--------------------------------LPGLVMAQDQRIRWYL 382 (770)
T ss_dssp -SSS--------SSTTTSCEECTTSCTTT--T--------------------------------CCCCCCCSSSCEEEEC
T ss_pred -CCc--------cccccCCccccCCccCC--C--------------------------------CCCeEEeCCCEEEEEE
Confidence 000 00111224667776541 0 1124577899999999
Q ss_pred EeCCCC--CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhhhc
Q 009127 427 QNWEDT--VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYL 504 (543)
Q Consensus 427 ~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~ 504 (543)
.|.+.. .||||||||.|+|++.++ .++||+.|+|++++.|+|++|+||.|+||||+++|++.
T Consensus 383 iN~g~~~~~H~fHlhGh~f~Vv~~dg----------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~ 446 (770)
T 2r7e_B 383 LSMGSNENIHSIHFSGHVFTVRKKEE----------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHLHA 446 (770)
T ss_dssp CCCCSSSCCCEEEBSSCCEECCSSSC----------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHHTT
T ss_pred EeCCCCcceEEEEEcCCEEEEEecCC----------------ceeeEEEECCCeEEEEEEEeCCCCceEEEecccccccc
Confidence 998743 799999999999987642 28999999999999999999999999999999999999
Q ss_pred ccEEEEEEecCCC
Q 009127 505 GQQFYLRVYSPAN 517 (543)
Q Consensus 505 GMm~~~~V~~p~~ 517 (543)
|||..|.|.+.++
T Consensus 447 GM~~~~~V~s~~C 459 (770)
T 2r7e_B 447 GMSTLFLVYSNKC 459 (770)
T ss_dssp BCCCCCCBCCSSC
T ss_pred ccccccccccccc
Confidence 9999999965554
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.9e-20 Score=187.34 Aligned_cols=261 Identities=10% Similarity=0.020 Sum_probs=150.0
Q ss_pred CCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCc-ceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeC
Q 009127 190 PDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLT-TSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMD 268 (543)
Q Consensus 190 ~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~-~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 268 (543)
...+++||+.. .|.|++++|+++++|+.|.+.. ..|.+++++.. ..||.. +. . .|.||+++++.++++
T Consensus 52 ~~~~~~ng~~p-gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~--~--~i~PG~~~~y~f~~~ 120 (333)
T 1mzy_A 52 LQAMTFDGSIP-GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GL--T--LINPGEKVVLRFKAT 120 (333)
T ss_dssp EEEEEETTBSS-CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GG--C--CBCTTEEEEEEEECC
T ss_pred EEEEEECCccC-CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--ce--e--EeCCCCEEEEEEECC
Confidence 35799999964 7999999999999999999642 23445555432 122221 11 2 399999999999998
Q ss_pred CCCcceEEEEeecc---CCC-ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCC-c
Q 009127 269 QAPQDYYIVVSSRF---TPR-VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYH-Y 343 (543)
Q Consensus 269 ~~~g~y~i~~~~~~---~~~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~-~ 343 (543)
.+|.||++++... ..+ .....+.+....... ...+.......+.+..+. .. .+.+.. ...+.+. +
T Consensus 121 -~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~-~~~~~~~p~~~d~e~~l~-l~--D~~~~~-----~~~g~~~~~ 190 (333)
T 1mzy_A 121 -RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDG-LKDHEGKPVRYDTVYYIG-ES--DHYIPK-----DEDGTYMRF 190 (333)
T ss_dssp -SCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTC-CBCTTSCBCCCSEEEEEE-EE--EECCCB-----CTTSCBCCC
T ss_pred -CCEEEEEeecCCcccchhhhhCCCEEEEEEccCcC-ccccccCCCccchheeee-ee--eeccCc-----ccccccccc
Confidence 5999999998642 011 112233333322211 000000000011110000 00 111100 0000000 0
Q ss_pred ccccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEE
Q 009127 344 GMIKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVE 423 (543)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ 423 (543)
........-.+.. . .......|.|||+.+..+. ...++++.|++++
T Consensus 191 ~~~~~~~~~~~~~-~-~~~~~~~~~ING~~~~~~~--------------------------------~~~l~v~~Ger~R 236 (333)
T 1mzy_A 191 SDPSEGYEDMVAV-M-DTLIPSHIVFNGAVGALTG--------------------------------EGALKAKVGDNVL 236 (333)
T ss_dssp SSHHHHHHHHHHH-H-TTTCCSEEEETTSTTTTSG--------------------------------GGCEEEETTCEEE
T ss_pred ccccccccchhHH-h-hccCCcEEEECCcccccCC--------------------------------CcceEecCCCEEE
Confidence 0000000000000 0 0011235889998642110 1125678899988
Q ss_pred EEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCC-cceeEEeCCCCEEEEEEEecCcccceeeecchhhh
Q 009127 424 IVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTV-ARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQ 502 (543)
Q Consensus 424 ~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~-~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~He 502 (543)
|+..|.+...|++++|+|.|.|++ + |.+. ..|. ++||+.|.+|+.+.|.|.+++||.|+||||+++|+
T Consensus 237 l~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~---------~~p~~~~dtv~l~pGer~~v~v~a~~pG~y~~~ch~~~h~ 305 (333)
T 1mzy_A 237 FVHSQPNRDSRPHLIGGHGDLVWE-T-GKFH---------NAPERDLETWFIRGGTAGAALYKFLQPGVYAYVNHNLIEA 305 (333)
T ss_dssp EEEEESSSCBCEEEETCCEEEEET-T-CCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHH
T ss_pred EEECCCCCccccEEECCCCeEEEe-C-Cccc---------CCCccCcceEEECCCceEEEEEEcCCCEEEEEecChhhhH
Confidence 887776555556667888899887 3 3221 1122 68999999999999999999999999999999997
Q ss_pred -hcccEEEEEEecCC
Q 009127 503 -YLGQQFYLRVYSPA 516 (543)
Q Consensus 503 -d~GMm~~~~V~~p~ 516 (543)
+.|||+.|+|....
T Consensus 306 ~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 306 VHKGATAHVLVEGEW 320 (333)
T ss_dssp HTTCCEEEEEEESCC
T ss_pred hhCCCEEEEEEcCCC
Confidence 99999999998654
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=189.61 Aligned_cols=247 Identities=15% Similarity=0.108 Sum_probs=163.7
Q ss_pred CCeEEEcCCCCCcceEEEecCCEEEEEEEEcCC-cceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeC
Q 009127 190 PDGLLINGRGWNGYTFTVEPGRTYRFRISNVGL-TTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMD 268 (543)
Q Consensus 190 ~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~-~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 268 (543)
...+++||+.. .|.++++.|++++||+.|... ...+.+|+||+. ..||... ...|.||+++++.|+++
T Consensus 48 ~~~~~~ng~~p-gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~ 116 (442)
T 2zoo_A 48 YVFWSFGETVP-GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKAL 116 (442)
T ss_dssp EEEEEETTBSS-CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECC
T ss_pred EEEEEECCcCC-CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcC
Confidence 35799999964 799999999999999999964 247889999975 3577542 23589999999999998
Q ss_pred CCCcceEEEEeeccC-CC-ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcccc
Q 009127 269 QAPQDYYIVVSSRFT-PR-VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGMI 346 (543)
Q Consensus 269 ~~~g~y~i~~~~~~~-~~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~ 346 (543)
.+|.||++++.... .+ .....+.|.+.... ++|. .+.+..+. .. .+....... .+ +
T Consensus 117 -~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~-----~~~~---~d~e~~l~-l~--d~~~~~~~~--~~------~-- 174 (442)
T 2zoo_A 117 -NPGLYIYHCATAPVGMHIANGMYGLILVEPKE-----GLAP---VDREYYLV-QG--DFYTKGEFG--EA------G-- 174 (442)
T ss_dssp -SCEEEEEECCCSSHHHHHHTTCEEEEEEECTT-----CCCC---CSEEEEEE-EE--EECBSSCTT--CC------E--
T ss_pred -CCeEEEEecCCCChHHHHhCccEEEEEEeCCC-----CCCC---CCceEEEE-ee--eeeccCccc--cc------c--
Confidence 69999999953210 01 11234444444322 1111 11110000 00 011110000 00 0
Q ss_pred cceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEE
Q 009127 347 KISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVF 426 (543)
Q Consensus 347 ~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i 426 (543)
...+.+... .......+.|||+.+... ....+.++.|++++|+|
T Consensus 175 --~~~~~~~~~--~~~~~~~~liNG~~~~~~--------------------------------~~~~l~v~~G~~vrlrl 218 (442)
T 2zoo_A 175 --LQPFDMAKA--IDEDADYVVFNGSVGSTT--------------------------------DENSLTAKVGETVRLYI 218 (442)
T ss_dssp --EECBCHHHH--HTTCCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEEEEE
T ss_pred --cccCChhHh--ccCCCCEEEECCCcCCCC--------------------------------CCCceEeCCCCEEEEEE
Confidence 000000000 001123578898754210 00125677899999999
Q ss_pred EeCC-CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhh-hhc
Q 009127 427 QNWE-DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWAR-QYL 504 (543)
Q Consensus 427 ~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~H-ed~ 504 (543)
.|.+ ...|+||+|||.|.|++.+++.. .|.+.|++.|.+++.+.|.|++++||.|++|||.+.| .+.
T Consensus 219 iN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~ 287 (442)
T 2zoo_A 219 GNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNK 287 (442)
T ss_dssp EEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTT
T ss_pred EeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCCeEEEEeccccccccc
Confidence 9976 36799999999999999976421 2568899999999999999999999999999999999 599
Q ss_pred ccEEEEEEecCC
Q 009127 505 GQQFYLRVYSPA 516 (543)
Q Consensus 505 GMm~~~~V~~p~ 516 (543)
|||+.++|...+
T Consensus 288 g~~a~l~v~~~~ 299 (442)
T 2zoo_A 288 GALAMLKVEGPD 299 (442)
T ss_dssp SCEEEEEEESCC
T ss_pred CceEEEEecCCC
Confidence 999999997655
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-18 Score=173.94 Aligned_cols=260 Identities=14% Similarity=0.138 Sum_probs=153.9
Q ss_pred CCeEEEcCCCCCcceEEEecCCEEEEEEEEcCC-cceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeC
Q 009127 190 PDGLLINGRGWNGYTFTVEPGRTYRFRISNVGL-TTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMD 268 (543)
Q Consensus 190 ~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~-~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~ 268 (543)
...+++||+.. .|.|+++.|+++++|+.|... ...|.++++++.. .||.. +. . .|.||+++++.++++
T Consensus 53 ~~~~~~ng~~p-gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~~y~f~~~ 121 (336)
T 1oe1_A 53 LQAMTFNGSMP-GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQATLRFKAD 121 (336)
T ss_dssp EEEEEETTBSS-CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEEEEEEECC
T ss_pred EEEEEECCccC-CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEEEEEEECC
Confidence 35799999953 799999999999999999875 2467889998752 23332 11 1 399999999999998
Q ss_pred CCCcceEEEEeeccC--CC-ccceEEEEEecCCCCCCCCCCCCCCCCccccccccccccccccCCCCCCCCCCCCCC-cc
Q 009127 269 QAPQDYYIVVSSRFT--PR-VLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYH-YG 344 (543)
Q Consensus 269 ~~~g~y~i~~~~~~~--~~-~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~-~~ 344 (543)
.+|+||++++.... .+ .....+.+.+..... ...+.+.....+....+. .. .+.+.. ...+.+. +.
T Consensus 122 -~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~-~~~~~~~~~~~D~e~~l~-~~--D~~~~~-----~~~g~~~~~~ 191 (336)
T 1oe1_A 122 -RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG-LKDPQGKPLHYDRAYTIG-EF--DLYIPK-----GPDGKYKDYA 191 (336)
T ss_dssp -SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTC-CBCTTSCBCCCSEEEEEE-EE--EECCCB-----CTTSSBCCCS
T ss_pred -CCeEEEEecCCCCchhHHHhCCCeEEEEEecCcC-CcccccCcccCCceeEee-ee--eeeecc-----ccCCceeecc
Confidence 59999999986321 01 112233333322211 001111110011110000 00 011100 0000000 00
Q ss_pred c-ccceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEE
Q 009127 345 M-IKISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVE 423 (543)
Q Consensus 345 ~-~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~ 423 (543)
. ...... .+... ... ....+.|||+.+... +...+.++.|++++
T Consensus 192 ~~~~~~~~-~~~~~-~~~-~~~~~liNG~~~~~~--------------------------------~~~~l~v~~GervR 236 (336)
T 1oe1_A 192 TLAESYGD-TVQVM-RTL-TPSHIVFNGKVGALT--------------------------------GANALTAKVGETVL 236 (336)
T ss_dssp STGGGHHH-HHHHH-HTT-CCSEEEETTSTTTTS--------------------------------GGGCEEEETTCEEE
T ss_pred cccccccc-hhhHh-hcC-CCCEEEECCeeccCC--------------------------------CCcceEcCCCCEEE
Confidence 0 000000 00000 000 123578888754210 01236678899999
Q ss_pred EEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCC-CcceeEEeCCCCEEEEEEEecCcccceeeecchhhh
Q 009127 424 IVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDT-VARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQ 502 (543)
Q Consensus 424 ~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p-~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~He 502 (543)
|+..+.....+++++|||.|.|+. + |.+. ..+ .+.||+.|++|+.+.+.+.+++||.|+||||.+.|.
T Consensus 237 lin~~~~~~~~~~~i~gh~~~Vi~-D-G~~~---------~p~~~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~ 305 (336)
T 1oe1_A 237 LIHSQANRDTRPHLIGGHGDWVWE-T-GKFA---------NPPQRDLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEA 305 (336)
T ss_dssp EEEEESSSCBCEEETTCCEEEEET-T-CCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHH
T ss_pred EEecCCCCccceEEECCcCceEeC-C-CcCc---------CCccccceEEEECCCCcEEEEEEcCCCceEEEEechhhcc
Confidence 876666556677778999999996 3 3221 112 257999999999999999999999999999999986
Q ss_pred -hcccEEEEEEecCC
Q 009127 503 -YLGQQFYLRVYSPA 516 (543)
Q Consensus 503 -d~GMm~~~~V~~p~ 516 (543)
+.||++.|+|.+..
T Consensus 306 ~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 306 FELGAAGHIKVEGKW 320 (336)
T ss_dssp HTTSCEEEEEEESCC
T ss_pred ccCCCeEEEEECCCC
Confidence 99999999998644
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=99.72 E-value=3.6e-16 Score=164.95 Aligned_cols=234 Identities=14% Similarity=0.138 Sum_probs=153.6
Q ss_pred eEEEEEEEEEEEecCCC-----------eeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeec-CcccCCCCC
Q 009127 28 YRFFTWKITYGDIYPLG-----------VKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISW-NGLQQRRNS 94 (543)
Q Consensus 28 ~~~~~l~~~~~~~~~~g-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~-HG~~~~~~~ 94 (543)
.+++.|.++.-....+| .....+++||+. .|+|+|++| ++++|+.|... ....+|+ ||..+.. .
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 45777777765554433 335789999996 699999999 99999999976 4678999 8875542 4
Q ss_pred CCCCCC----C--CCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccce------------eEEEEecCCCCCCCCC
Q 009127 95 WQDGVY----G--TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAF------------GGIRIWSRPRIPVPFP 156 (543)
Q Consensus 95 ~~DG~p----~--tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~------------G~liV~~~~~~~~~~~ 156 (543)
..||.+ . .+..|.|||++++.+++. +.|+||++++........+. ..+-+........+
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 689964 2 457799999999999995 68999999986433221111 11112111100000
Q ss_pred CCCCceEEEeeeeeeccH-HHHHHHhccCCCCCCCCeEEEcCCCCC--cceEEEecCCEEEEEEEEcCCcceEEEEEeCC
Q 009127 157 PPAGDFTVLAGDWYRSNH-YVLRRLLDSGHNLPFPDGLLINGRGWN--GYTFTVEPGRTYRFRISNVGLTTSINFRIQGH 233 (543)
Q Consensus 157 ~~~~e~~l~~~d~~~~~~-~~~~~~~~~g~~~~~~~~~liNG~~~~--~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~ 233 (543)
..+++..|..+..-.. ......+... ..|+|||+.+. .+.+.++.|++++|+|+|. ..|+||||||
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh 374 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDVNRIDVTAQQGTWERWTVRAD---EPQAFHIEGV 374 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCTTCCCEEEETTCEEEEEEEEE---EEEEEEETTC
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCCCCCcEEcCCCCEEEEEEECC---CCcCeEECCc
Confidence 0000000000000000 0000000000 04789999862 4468999999999999998 4799999999
Q ss_pred eeEEEEEcCccc---cccccCeEEEcCCCeEEEEEEeCCCCcc----eEEEEeec
Q 009127 234 SMKLVEVEGSHT---LQNTYAALDIHLGQTYSVLVTMDQAPQD----YYIVVSSR 281 (543)
Q Consensus 234 ~~~via~DG~~~---~p~~~~~v~l~pgeR~dv~v~~~~~~g~----y~i~~~~~ 281 (543)
.|+|++.||.+. +|..+|++.+ |+++.|.|+++ .+|. |.++|+..
T Consensus 375 ~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil 426 (451)
T 2uxt_A 375 MFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTL 426 (451)
T ss_dssp EEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSH
T ss_pred eEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCch
Confidence 999999999875 4788999999 99999999998 4665 99999875
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.7e-16 Score=165.63 Aligned_cols=234 Identities=13% Similarity=0.173 Sum_probs=162.6
Q ss_pred eEEEEEEEEEEEecC------------CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCC
Q 009127 28 YRFFTWKITYGDIYP------------LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNS 94 (543)
Q Consensus 28 ~~~~~l~~~~~~~~~------------~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~ 94 (543)
.+++.|.++.-.... .|.....+++||+. .|.|+|++| ++++|+.|... ....+|++|..+.. .
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 466777766533221 13345689999997 699999999 99999999975 46789999976543 4
Q ss_pred CCCCCCC------CCCcCCCCCeEEEEEEeCCCcccceecCCchhh--hh-ccc--------------eeE--EEEecCC
Q 009127 95 WQDGVYG------TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFH--KA-AGA--------------FGG--IRIWSRP 149 (543)
Q Consensus 95 ~~DG~p~------tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q--~~-~Gl--------------~G~--liV~~~~ 149 (543)
+.||.+. ....|.|||+++..+++. ++|.||++|+.... .. .|| ... |.+....
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~-~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRLR-KEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECC-SSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEcC-CCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 6799752 345699999999999995 59999999973211 10 122 112 2232221
Q ss_pred CCCCCCCCC---CCceE--EEeeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCCC--cceEEEecCCEEEEEEEEcCC
Q 009127 150 RIPVPFPPP---AGDFT--VLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWN--GYTFTVEPGRTYRFRISNVGL 222 (543)
Q Consensus 150 ~~~~~~~~~---~~e~~--l~~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~--~p~~~v~~G~~~rlRiiN~~~ 222 (543)
. +.+.+.. ..++. -.-..+... .+. .+..|+|||+.+. .+.+.++.|++++|+|.|.+.
T Consensus 302 ~-~~~~p~~l~~~~~l~~~~~~r~~~l~----------~~~---~g~~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~ 367 (439)
T 2xu9_A 302 K-PLPLPKALSPFPTLPAPVVTRRLVLT----------EDM---MAARFFINGQVFDHRRVDLKGQAQTVEVWEVENQGD 367 (439)
T ss_dssp C-CCCCCSCCCCCCCCCCCSEEEEEEEE----------EEG---GGTEEEETTBCCCTTCCCEEECTTCEEEEEEEECSS
T ss_pred c-cccCcccCCCcccCCCCCcceEEEEE----------eec---cCceEeECCEECCCCCCceecCCCCEEEEEEEcCCC
Confidence 1 1111100 00000 000000000 000 1137899999872 346899999999999999987
Q ss_pred cceEEEEEeCCeeEEEEEcCccc-cccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeec
Q 009127 223 TTSINFRIQGHSMKLVEVEGSHT-LQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSR 281 (543)
Q Consensus 223 ~~~~~~~i~g~~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 281 (543)
. .|+||||||.|+|++.+|... +|...|++.+.||+++.+.++++ .||.|.++|+..
T Consensus 368 ~-~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil 425 (439)
T 2xu9_A 368 M-DHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIV 425 (439)
T ss_dssp S-CEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred C-CCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcc
Confidence 5 799999999999999999875 58899999999999999999987 799999999865
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.65 E-value=5e-15 Score=159.03 Aligned_cols=228 Identities=16% Similarity=0.189 Sum_probs=152.9
Q ss_pred EEEEEECCcCC---------CceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCe
Q 009127 47 QQGILINGQFP---------GPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKN 111 (543)
Q Consensus 47 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~ 111 (543)
...+++||+.. -|+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccce
Confidence 36789999853 189999999999999999976 46789998876543 46899752 3466999999
Q ss_pred EEEEEEeCCCcccceecCCchh---hhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHH-----------HH
Q 009127 112 FTYVLQAKDQIGSYFYFPSFLF---HKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHY-----------VL 177 (543)
Q Consensus 112 ~~y~f~~~~~~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~-----------~~ 177 (543)
++..+++.+.+|.||.+++... ....|+..+++.........+..... +. ..+.+....... ..
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcc
Confidence 9999999645799999998531 23334544555433221111110000 00 000000000000 00
Q ss_pred HHH--hccCCCCCCCCeEEEcCCCCC-----------------------cceEEEecCCEEEEEEEEcCCcceEEEEEeC
Q 009127 178 RRL--LDSGHNLPFPDGLLINGRGWN-----------------------GYTFTVEPGRTYRFRISNVGLTTSINFRIQG 232 (543)
Q Consensus 178 ~~~--~~~g~~~~~~~~~liNG~~~~-----------------------~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g 232 (543)
... +..+.. .....|+|||+.+. .+.++++.|++++++++| . ..|+|||||
T Consensus 348 ~~~~~l~~~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N--~-~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGRN-ATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG--G-GNHPFHLHG 423 (521)
T ss_dssp SEEEECCEECC-SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC--C-BSCEEEESS
T ss_pred eEEEEEEEecC-CceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC--C-CCCCEEEcc
Confidence 000 000000 01126789999862 135789999999999999 3 479999999
Q ss_pred CeeEEEEEcCcc----ccccccCeEEE-cCCCeEEEEEEeCCCCcceEEEEeecc
Q 009127 233 HSMKLVEVEGSH----TLQNTYAALDI-HLGQTYSVLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 233 ~~~~via~DG~~----~~p~~~~~v~l-~pgeR~dv~v~~~~~~g~y~i~~~~~~ 282 (543)
|.|+|++.+|.. .+|...|++.+ .||+++.+.|+++ .||.|.++|+...
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~~ 477 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHIDW 477 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCHH
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChHH
Confidence 999999999865 35888999999 7999999999998 7999999998753
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=8e-15 Score=156.82 Aligned_cols=249 Identities=14% Similarity=0.147 Sum_probs=161.4
Q ss_pred EEEEEEEEEEecCCCe-----eEEEEEECCcCC--------CceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCC
Q 009127 30 FFTWKITYGDIYPLGV-----KQQGILINGQFP--------GPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSW 95 (543)
Q Consensus 30 ~~~l~~~~~~~~~~g~-----~~~~~~~Ng~~p--------gP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~ 95 (543)
++.|.++.-....++. ....+++||+.. .|+|+|++|+++++|+.|... ....+|++|..+.. .+
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 4556665543333332 246789999853 289999999999999999975 46789998876543 46
Q ss_pred CCCCCC-----CCCcCCCCCeEEEEEEeCCCcccceecCCch--hh-----hhccceeEEEEecCCCCCCCCCCCCCceE
Q 009127 96 QDGVYG-----TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL--FH-----KAAGAFGGIRIWSRPRIPVPFPPPAGDFT 163 (543)
Q Consensus 96 ~DG~p~-----tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~--~q-----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~ 163 (543)
.||.+. ....|.|||+++..+++.+.+|.||.+++.. .+ ...|+..+++.........|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 899752 3456899999999999964579999999843 11 2334434444433221111110000000
Q ss_pred EEeeeeeeccH--HHH---------HHHhccCCCCCCCCeEEEcCCCCC-----------------------cceEEEec
Q 009127 164 VLAGDWYRSNH--YVL---------RRLLDSGHNLPFPDGLLINGRGWN-----------------------GYTFTVEP 209 (543)
Q Consensus 164 l~~~d~~~~~~--~~~---------~~~~~~g~~~~~~~~~liNG~~~~-----------------------~p~~~v~~ 209 (543)
..+.+...... ... ...+..... .....|+|||+.+. .+.++++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00000000000 000 000000000 00126889999862 13578999
Q ss_pred CCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcc----ccccccCeEEE-cCCCeEEEEEEeCCCCcceEEEEeecc
Q 009127 210 GRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSH----TLQNTYAALDI-HLGQTYSVLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 210 G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~----~~p~~~~~v~l-~pgeR~dv~v~~~~~~g~y~i~~~~~~ 282 (543)
|++++++++|......|+||||||.|+|++.+|.. .+|...|++.+ .||+++.+.|+++ .||.|.++|+...
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil~ 456 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIEF 456 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCchh
Confidence 99999999964434589999999999999999875 25888999999 7999999999998 7999999998753
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.63 E-value=8.2e-17 Score=134.98 Aligned_cols=89 Identities=21% Similarity=0.325 Sum_probs=71.3
Q ss_pred cCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCC--CCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCch
Q 009127 55 QFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNS--WQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL 132 (543)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~--~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (543)
+|++|+|++++||+|+ ++|..+..+++||||..++... .+||.+.+++.|.||++++|+|++++++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~-- 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA-- 90 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT--
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC--
Confidence 6788999999999975 5799889999999998654210 122222235789999999999998557999999999
Q ss_pred hhhhccceeEEEEec
Q 009127 133 FHKAAGAFGGIRIWS 147 (543)
Q Consensus 133 ~q~~~Gl~G~liV~~ 147 (543)
.|..+||.|.|+|++
T Consensus 91 ~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHRGAGMVGKITVEG 105 (105)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred CchhcCCEEEEEEcC
Confidence 567889999999974
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.6e-14 Score=149.12 Aligned_cols=239 Identities=14% Similarity=0.171 Sum_probs=159.2
Q ss_pred EEEEEEEEEEEecCCCe-------------eEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCC
Q 009127 29 RFFTWKITYGDIYPLGV-------------KQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNS 94 (543)
Q Consensus 29 ~~~~l~~~~~~~~~~g~-------------~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~ 94 (543)
.+| |.++......+|. ....+++||+. .|+|.|++|+ |+|+.|... ....+|++|.... ..
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~-vI 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFI-LV 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEE-EE
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceE-EE
Confidence 444 6666655444442 34679999996 6899999999 999999965 6678999998754 34
Q ss_pred CCCCCC----C--CCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccc----------eeEEEEecCC-CCCC---C
Q 009127 95 WQDGVY----G--TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGA----------FGGIRIWSRP-RIPV---P 154 (543)
Q Consensus 95 ~~DG~p----~--tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl----------~G~liV~~~~-~~~~---~ 154 (543)
+.||.+ . ....|.|||+++.-++++ +.|+|..-++.... .|+ ..-+-+...+ ..|. +
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 789732 2 446799999999999995 57887776653211 111 1112222211 1111 0
Q ss_pred ---CCCCCCceEEEeeeeeeccHHHHHHHhccCCCC---CCCCeEEEcCCCC--CcceEEEecCCEEEEEEEEcCCcceE
Q 009127 155 ---FPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNL---PFPDGLLINGRGW--NGYTFTVEPGRTYRFRISNVGLTTSI 226 (543)
Q Consensus 155 ---~~~~~~e~~l~~~d~~~~~~~~~~~~~~~g~~~---~~~~~~liNG~~~--~~p~~~v~~G~~~rlRiiN~~~~~~~ 226 (543)
.+..+.+..+.++....+ .......+... .....++|||+.+ +.+.++++.|++++|+|.|.+.. .|
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~~-~H 407 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHMQ----MHGMMGKSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVEDWIVINKSHM-DH 407 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCST----TTTGGGCCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEEEEEEECSSS-CE
T ss_pred CCCCCCCCcEEEEEEeccchh----cccccccccccccccccceeEECCEeCCCCCceEEeCCCCEEEEEEEcCCCC-ce
Confidence 111122233333221100 00000000000 0012599999987 34679999999999999997765 89
Q ss_pred EEEEeCCeeEEEEE--cCccc---cccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeec
Q 009127 227 NFRIQGHSMKLVEV--EGSHT---LQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSR 281 (543)
Q Consensus 227 ~~~i~g~~~~via~--DG~~~---~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~ 281 (543)
+||||||+|+|++. +|... ++...|++.|.|||++.|.++++ .+|.|.++|+..
T Consensus 408 p~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 408 PFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp EEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSH
T ss_pred eEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCCh
Confidence 99999999999999 99875 35678999999999999999997 799999999864
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-13 Score=144.88 Aligned_cols=232 Identities=15% Similarity=0.141 Sum_probs=151.3
Q ss_pred eEEEEEECCcC---------CCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCC
Q 009127 46 KQQGILINGQF---------PGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGK 110 (543)
Q Consensus 46 ~~~~~~~Ng~~---------pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~ 110 (543)
....+++||+- +-|.|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCce
Confidence 34789999963 3479999999999999999864 56788888876543 46899763 335699999
Q ss_pred eEEEEEEeCCCcccceecCCch---hhhhccceeEEEEecCCCCCCCCCCCCC-ceEEEeeeeeeccHH-----------
Q 009127 111 NFTYVLQAKDQIGSYFYFPSFL---FHKAAGAFGGIRIWSRPRIPVPFPPPAG-DFTVLAGDWYRSNHY----------- 175 (543)
Q Consensus 111 ~~~y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~----------- 175 (543)
+++..+++.+..|.||.++... .....|..-+++.........|...... ... .+.+.......
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 9999999964569999998632 1122334334554432211111100000 000 00000000000
Q ss_pred HHHHHhccCCCCCCCCeEEEcCCCCC-----------------------cceEEEecCCEEEEEEEEcCCcceEEEEEeC
Q 009127 176 VLRRLLDSGHNLPFPDGLLINGRGWN-----------------------GYTFTVEPGRTYRFRISNVGLTTSINFRIQG 232 (543)
Q Consensus 176 ~~~~~~~~g~~~~~~~~~liNG~~~~-----------------------~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g 232 (543)
.....+.... ...+..|+|||+.+. .+.+.++.|++++|.|.|......|+|||||
T Consensus 325 ~~d~~~~l~~-~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHG 403 (495)
T 3t6v_A 325 GADCNLNLSL-GFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHG 403 (495)
T ss_dssp CSSEEEECCE-EEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETT
T ss_pred CCcEEEEEEE-EecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecC
Confidence 0000000000 001136889998751 1248999999999999843333589999999
Q ss_pred CeeEEEEEcCccc----cccccCeEEEcC-CCeEEEEEEeCCCCcceEEEEeec
Q 009127 233 HSMKLVEVEGSHT----LQNTYAALDIHL-GQTYSVLVTMDQAPQDYYIVVSSR 281 (543)
Q Consensus 233 ~~~~via~DG~~~----~p~~~~~v~l~p-geR~dv~v~~~~~~g~y~i~~~~~ 281 (543)
|.|+|++.+|... .|...|++.+.+ |+.+.+.|+++ .||.|.++|+..
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~ 456 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHID 456 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCH
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecch
Confidence 9999999988653 588899999997 99999999999 799999999865
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.5e-13 Score=144.01 Aligned_cols=219 Identities=11% Similarity=0.151 Sum_probs=148.9
Q ss_pred EEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeEEEEEEeCC
Q 009127 47 QQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNFTYVLQAKD 120 (543)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~~y~f~~~~ 120 (543)
...+++||+. .|+|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ....|.|||+++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4678999996 699999999999999999965 46678888875543 46899763 3466999999999999953
Q ss_pred C-cccceecCCchhhhh------cccee-EEEEecCCC-CCCCC-----CC-C---------------CCceEEEeeeee
Q 009127 121 Q-IGSYFYFPSFLFHKA------AGAFG-GIRIWSRPR-IPVPF-----PP-P---------------AGDFTVLAGDWY 170 (543)
Q Consensus 121 ~-~Gt~wYH~H~~~q~~------~Gl~G-~liV~~~~~-~~~~~-----~~-~---------------~~e~~l~~~d~~ 170 (543)
+ .|.||.......... ....+ +++...... .+.+. .. . ..+..+.+.--
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~- 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVV- 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEE-
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEE-
Confidence 3 578999876432210 01122 233222111 11110 00 0 00001111000
Q ss_pred eccHHHHHHHhccCCCCCCCCeEEEcCCCCC--------------------------cceEEEecCCEEEEEEEEcCCcc
Q 009127 171 RSNHYVLRRLLDSGHNLPFPDGLLINGRGWN--------------------------GYTFTVEPGRTYRFRISNVGLTT 224 (543)
Q Consensus 171 ~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~--------------------------~p~~~v~~G~~~rlRiiN~~~~~ 224 (543)
+... ......++|||+.+. ...+.++.|++++|.|.|.+..
T Consensus 324 ----------~~~~--~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~- 390 (534)
T 1zpu_A 324 ----------MDNL--KNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG- 390 (534)
T ss_dssp ----------EEEC--TTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS-
T ss_pred ----------eecc--CCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC-
Confidence 0000 001236789998651 2358899999999999999865
Q ss_pred eEEEEEeCCeeEEEEEcCc-----------c---------ccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeecc
Q 009127 225 SINFRIQGHSMKLVEVEGS-----------H---------TLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 225 ~~~~~i~g~~~~via~DG~-----------~---------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~ 282 (543)
.|+||||||.|+|++.++. + ..|...|++.+.||+.+.|.|+++ .||.|.+||+...
T Consensus 391 ~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~~ 467 (534)
T 1zpu_A 391 THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIEW 467 (534)
T ss_dssp CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCHH
T ss_pred CCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCchh
Confidence 8999999999999999853 1 236678999999999999999998 7999999998753
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.5e-13 Score=144.93 Aligned_cols=204 Identities=11% Similarity=0.102 Sum_probs=137.3
Q ss_pred eEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeEEEEEEe-CCCcccceecCCch
Q 009127 60 QIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNFTYVLQA-KDQIGSYFYFPSFL 132 (543)
Q Consensus 60 ~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~~y~f~~-~~~~Gt~wYH~H~~ 132 (543)
+|+|++|+++++|+.|... ....+|++|..+.. .+.||.+. ....|.|||+++..+++ .+.+|.||-+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999965 45678888876543 46899652 34679999999999999 33489999999854
Q ss_pred h---hhhccceeEEEEecCCC--CCC---C-CC--------------------------CCCCceEEEeeeeeeccHHHH
Q 009127 133 F---HKAAGAFGGIRIWSRPR--IPV---P-FP--------------------------PPAGDFTVLAGDWYRSNHYVL 177 (543)
Q Consensus 133 ~---q~~~Gl~G~liV~~~~~--~~~---~-~~--------------------------~~~~e~~l~~~d~~~~~~~~~ 177 (543)
. +.. ...+.|-+..... .+. + .+ ..++.+.+.+..-.
T Consensus 284 ~~~~~~~-~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~------- 355 (552)
T 1aoz_A 284 ARHPNTP-PGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNV------- 355 (552)
T ss_dssp SSCCCSC-CEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEE-------
T ss_pred cCCCCCc-cEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEeecc-------
Confidence 2 111 1223333333221 000 0 00 00111111110000
Q ss_pred HHHhccCCCCCCCCeEEEcCCCCC---------------------------------------------cceEEEecCCE
Q 009127 178 RRLLDSGHNLPFPDGLLINGRGWN---------------------------------------------GYTFTVEPGRT 212 (543)
Q Consensus 178 ~~~~~~g~~~~~~~~~liNG~~~~---------------------------------------------~p~~~v~~G~~ 212 (543)
......|+|||+.+. ...+.++.|++
T Consensus 356 ---------~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~ 426 (552)
T 1aoz_A 356 ---------INGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEV 426 (552)
T ss_dssp ---------ETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCE
T ss_pred ---------CCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCE
Confidence 000113555655320 13478999999
Q ss_pred EEEEEEEcCC-----cceEEEEEeCCeeEEEEEc-Ccc----------ccccccCeEEEcCCCeEEEEEEeCCCCcceEE
Q 009127 213 YRFRISNVGL-----TTSINFRIQGHSMKLVEVE-GSH----------TLQNTYAALDIHLGQTYSVLVTMDQAPQDYYI 276 (543)
Q Consensus 213 ~rlRiiN~~~-----~~~~~~~i~g~~~~via~D-G~~----------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i 276 (543)
++|.|.|.+. ...|+||||||.|+|++.. |.+ .+|...|++.+.||+.+.|.|+++ .||.|.+
T Consensus 427 v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~ 505 (552)
T 1aoz_A 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAF 505 (552)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEE
T ss_pred EEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEE
Confidence 9999999874 3469999999999999984 653 257789999999999999999998 7999999
Q ss_pred EEeecc
Q 009127 277 VVSSRF 282 (543)
Q Consensus 277 ~~~~~~ 282 (543)
+|+...
T Consensus 506 HCHi~~ 511 (552)
T 1aoz_A 506 HCHIEP 511 (552)
T ss_dssp EESSHH
T ss_pred Eeeehh
Confidence 998753
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-13 Score=144.83 Aligned_cols=231 Identities=13% Similarity=0.148 Sum_probs=149.9
Q ss_pred eEEEEEECCcC--------CCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCe
Q 009127 46 KQQGILINGQF--------PGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKN 111 (543)
Q Consensus 46 ~~~~~~~Ng~~--------pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~ 111 (543)
....+++||+- +-|.|+|++|+++++|+.|... ....+|++|..+.. .+.||.+. ....|.|||+
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcE
Confidence 34789999973 3479999999999999999865 56788999976543 46899763 3356999999
Q ss_pred EEEEEEeCCCcccceecCCch--h-hhhccceeEEEEecCCCCCCCCCCCCCceEEEeeeeeeccHH-----------HH
Q 009127 112 FTYVLQAKDQIGSYFYFPSFL--F-HKAAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWYRSNHY-----------VL 177 (543)
Q Consensus 112 ~~y~f~~~~~~Gt~wYH~H~~--~-q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~-----------~~ 177 (543)
++..+++.+..|.||..+... . ....|..-+++.........|........ ..+.+....... ..
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCC
Confidence 999999965569999987632 1 11222322344333221111110000000 000010000000 00
Q ss_pred HHHhccCCCCCCCCeEEEcCCCCC-----------------------cceEEEecCCEEEEEEEE---cCCcceEEEEEe
Q 009127 178 RRLLDSGHNLPFPDGLLINGRGWN-----------------------GYTFTVEPGRTYRFRISN---VGLTTSINFRIQ 231 (543)
Q Consensus 178 ~~~~~~g~~~~~~~~~liNG~~~~-----------------------~p~~~v~~G~~~rlRiiN---~~~~~~~~~~i~ 231 (543)
...+.... ...+..|+|||+.+. .+.+.++.|++++|.|.| .+. ..|+||||
T Consensus 323 d~~~~l~~-~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~-~~HP~HLH 400 (499)
T 3pxl_A 323 DKAINMAF-NFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPG-APHPFHLH 400 (499)
T ss_dssp SEEEECCE-EECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCS-CSCEEEET
T ss_pred cEEEEEEE-EecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCC-CCccceec
Confidence 00000000 001236889998751 235789999999999994 333 47999999
Q ss_pred CCeeEEEEEcCccc----cccccCeEEEcC---CCeEEEEEEeCCCCcceEEEEeec
Q 009127 232 GHSMKLVEVEGSHT----LQNTYAALDIHL---GQTYSVLVTMDQAPQDYYIVVSSR 281 (543)
Q Consensus 232 g~~~~via~DG~~~----~p~~~~~v~l~p---geR~dv~v~~~~~~g~y~i~~~~~ 281 (543)
||.|+|++.+|... .|...|++.+.+ |+.+.+.|+++ .||.|.++|+..
T Consensus 401 Gh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~ 456 (499)
T 3pxl_A 401 GHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHID 456 (499)
T ss_dssp TCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCCh
Confidence 99999999887643 588899999986 99999999998 799999999864
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=99.50 E-value=6.3e-13 Score=140.44 Aligned_cols=248 Identities=17% Similarity=0.191 Sum_probs=156.3
Q ss_pred EEEEEEEEEEEecCCC--------------eeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeec-CcccCCC
Q 009127 29 RFFTWKITYGDIYPLG--------------VKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISW-NGLQQRR 92 (543)
Q Consensus 29 ~~~~l~~~~~~~~~~g--------------~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~-HG~~~~~ 92 (543)
.++.|.++.-....+| .....+++||+. .|.+.+ +|+++|+|+.|... ....+++ +|..+.
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~- 227 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLY- 227 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEE-
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEE-
Confidence 3667777765544333 234679999996 588876 67899999999965 4567877 575433
Q ss_pred CCCCCCCC----C--CCCcCCCCCeEEEEEEeCCCcccceecCCchhhh----h--ccceeEEEEec-----CCCCCCCC
Q 009127 93 NSWQDGVY----G--TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHK----A--AGAFGGIRIWS-----RPRIPVPF 155 (543)
Q Consensus 93 ~~~~DG~p----~--tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~----~--~Gl~G~liV~~-----~~~~~~~~ 155 (543)
....||.+ . ....|.|||+++.-+++. +.++|+.-+...... . +.-.-.+-|.+ ....|...
T Consensus 228 vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 228 VIASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp EEEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred EEEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 24689953 2 446799999999999996 577887765421110 0 00011222222 11111111
Q ss_pred ---C---C----CCCceEEEeeeee-eccHHHHHH-H----hc------------cCCCC--------CCCCeEEEcCCC
Q 009127 156 ---P---P----PAGDFTVLAGDWY-RSNHYVLRR-L----LD------------SGHNL--------PFPDGLLINGRG 199 (543)
Q Consensus 156 ---~---~----~~~e~~l~~~d~~-~~~~~~~~~-~----~~------------~g~~~--------~~~~~~liNG~~ 199 (543)
+ . ..+++.+.+.... ......+.+ + +. .|... .....|+|||+.
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~ 386 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQA 386 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBC
T ss_pred ccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCee
Confidence 0 0 0122233321100 000000000 0 00 01000 001247999998
Q ss_pred C--CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcccc---ccccCeEEEcCCCeEEEEEEeCC---CC
Q 009127 200 W--NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTL---QNTYAALDIHLGQTYSVLVTMDQ---AP 271 (543)
Q Consensus 200 ~--~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~---p~~~~~v~l~pgeR~dv~v~~~~---~~ 271 (543)
+ ..+.++++.|+++||+|+|.+....|+|||||++|+|++.||.... +...|++.|. |+++.|+|++++ .+
T Consensus 387 ~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~ 465 (488)
T 3od3_A 387 FDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKE 465 (488)
T ss_dssp CCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGG
T ss_pred CCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCC
Confidence 6 3567999999999999999996558999999999999999998764 3578999999 999999999974 35
Q ss_pred cceEEEEeec
Q 009127 272 QDYYIVVSSR 281 (543)
Q Consensus 272 g~y~i~~~~~ 281 (543)
|.|.++|+..
T Consensus 466 G~~m~HCH~l 475 (488)
T 3od3_A 466 HAYMAHCHLL 475 (488)
T ss_dssp GCEEEEESSH
T ss_pred CCEEEeCCch
Confidence 7999999864
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=3.8e-12 Score=137.66 Aligned_cols=234 Identities=13% Similarity=0.085 Sum_probs=147.3
Q ss_pred EEEEEECCcCC--------CceEEEecCCEEEEEEEECCCC-CceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeE
Q 009127 47 QQGILINGQFP--------GPQIDAVTNDNLIISVYNYLRE-PFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNF 112 (543)
Q Consensus 47 ~~~~~~Ng~~p--------gP~i~v~~Gd~v~i~~~N~l~~-~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~ 112 (543)
...+++||+.. -|+|+|++|+++++||.|.... ...+|++|..+.. ...||.+. ....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 46789999873 3799999999999999999754 5689999876543 46799762 34669999999
Q ss_pred EEEEEeCCCcccceecCCc--hhh---hhcc-ceeEEEEecCCCC-CCC--CCCCC----CceEE-EeeeeeeccH---H
Q 009127 113 TYVLQAKDQIGSYFYFPSF--LFH---KAAG-AFGGIRIWSRPRI-PVP--FPPPA----GDFTV-LAGDWYRSNH---Y 175 (543)
Q Consensus 113 ~y~f~~~~~~Gt~wYH~H~--~~q---~~~G-l~G~liV~~~~~~-~~~--~~~~~----~e~~l-~~~d~~~~~~---~ 175 (543)
+..+++.+.+|.||..... ... .... ..+.|-+...... |.. ....+ .+..+ .+........ .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999996557999988764 211 0111 1233333332210 100 00000 00000 0000000000 0
Q ss_pred HHHHHh--ccCCCCCCCCeEEEcCCCCC----cc-----------------eEEEecCCEEEEEEEEcCC----cceEEE
Q 009127 176 VLRRLL--DSGHNLPFPDGLLINGRGWN----GY-----------------TFTVEPGRTYRFRISNVGL----TTSINF 228 (543)
Q Consensus 176 ~~~~~~--~~g~~~~~~~~~liNG~~~~----~p-----------------~~~v~~G~~~rlRiiN~~~----~~~~~~ 228 (543)
.....+ ...........++|||+.+. .| .+.+..++.+++.++|... ...|+|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 000000 00000112246899999751 12 3677777777776666643 458999
Q ss_pred EEeCCeeEEEEEcC---------cc------------ccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeecc
Q 009127 229 RIQGHSMKLVEVEG---------SH------------TLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 229 ~i~g~~~~via~DG---------~~------------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~ 282 (543)
|||||.|+|++.++ .. ..|...|++.+.+|+++.+.|+++ .||.|.++|+...
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil~ 507 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIAW 507 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCHH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecchh
Confidence 99999999999986 22 146788999999999999999988 7999999998754
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=122.17 Aligned_cols=99 Identities=16% Similarity=0.219 Sum_probs=73.0
Q ss_pred CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCC------CCCC--CCcCCCCC--eE
Q 009127 43 LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDG------VYGT--TCPIPPGK--NF 112 (543)
Q Consensus 43 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG------~p~t--q~~i~PG~--~~ 112 (543)
.|+...-+.++|. ++|+|+|++||+|+|+++|... ...|.+.+...+....+. ...+ ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3444444555666 5799999999999999999733 446777665444333221 0100 12789999 99
Q ss_pred EEEEEeCCCcccceecCCchhhhhccceeEEEEe
Q 009127 113 TYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 113 ~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (543)
+|.|++ ++|+||||||...|..+||.|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999997 69999999999899999999999985
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=99.47 E-value=1e-12 Score=138.22 Aligned_cols=226 Identities=15% Similarity=0.138 Sum_probs=151.4
Q ss_pred EEEEEEEEEEEecC-------------CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeec--Cc---cc
Q 009127 29 RFFTWKITYGDIYP-------------LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISW--NG---LQ 89 (543)
Q Consensus 29 ~~~~l~~~~~~~~~-------------~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~--HG---~~ 89 (543)
+++.|.++.-.... .|.....+++||+. .|+|+|++| ++++|+.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56667776654332 12234678999996 699999999 99999999975 5678999 77 44
Q ss_pred CCCCCCCCCCCC------CCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc------------c-ceeE--EEEecC
Q 009127 90 QRRNSWQDGVYG------TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA------------G-AFGG--IRIWSR 148 (543)
Q Consensus 90 ~~~~~~~DG~p~------tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~------------G-l~G~--liV~~~ 148 (543)
+. ..+.||.+. ....|.|||+++..++++ .+.||..++....... + -... |.+...
T Consensus 216 ~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MR-LIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EE-EEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EE-EEEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 33 246899652 335699999999999995 4788988763211000 0 1112 222221
Q ss_pred CCC--CCCCC-------CCCCceEEEeeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCC--CcceEE-EecCCEEEEE
Q 009127 149 PRI--PVPFP-------PPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW--NGYTFT-VEPGRTYRFR 216 (543)
Q Consensus 149 ~~~--~~~~~-------~~~~e~~l~~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~--~~p~~~-v~~G~~~rlR 216 (543)
... +..+. ....+..+.+.. + ...|+|||+.+ ..+.++ ++.|++++|+
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~---------------~-----~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~ 352 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL---------------S-----GMQWTINGMFWNASNPLFEHVSVEGVELWE 352 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE---------------E-----TTEEEETTBCCCTTCTTCCCEEECEEEEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC---------------C-----CceeeECCCcCCCCCCceeccCCCCeEEEE
Confidence 111 00000 000111111110 0 12589999986 245567 9999999999
Q ss_pred EEEcCCcceEEEEEeCCeeEEEEEcCccc------------cc---cccCeEEEcCCCeEEEEEEeC---C-CCcceEEE
Q 009127 217 ISNVGLTTSINFRIQGHSMKLVEVEGSHT------------LQ---NTYAALDIHLGQTYSVLVTMD---Q-APQDYYIV 277 (543)
Q Consensus 217 iiN~~~~~~~~~~i~g~~~~via~DG~~~------------~p---~~~~~v~l~pgeR~dv~v~~~---~-~~g~y~i~ 277 (543)
|.|.+....|+||||||.|+|++.+|... .| ...|++.+.||+++.+++++. . .| |.++
T Consensus 353 i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~H 430 (448)
T 3aw5_A 353 IVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFH 430 (448)
T ss_dssp EEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEE
T ss_pred EEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEE
Confidence 99998334899999999999999999764 23 578999999999999996664 2 45 8999
Q ss_pred Eeec
Q 009127 278 VSSR 281 (543)
Q Consensus 278 ~~~~ 281 (543)
|+..
T Consensus 431 CHil 434 (448)
T 3aw5_A 431 CHNL 434 (448)
T ss_dssp ESSH
T ss_pred cCCh
Confidence 9864
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=99.44 E-value=4e-13 Score=113.75 Aligned_cols=105 Identities=18% Similarity=0.110 Sum_probs=79.0
Q ss_pred EEEEEEEEEEEe-----cCCCeeEEE-EEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCC
Q 009127 29 RFFTWKITYGDI-----YPLGVKQQG-ILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGT 102 (543)
Q Consensus 29 ~~~~l~~~~~~~-----~~~g~~~~~-~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~t 102 (543)
++|.+.+.+... ..+|..... ..||+++++|.|++++||+|+++++|.... +||+.... .|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---
Confidence 346666665443 345666555 589999999999999999999999999765 55554321 122
Q ss_pred CCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEec
Q 009127 103 TCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 103 q~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
+..+.||++++|.|++ +++|+||||||...... +|.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 3678999999999998 58999999998765433 3999999974
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.39 E-value=9.9e-13 Score=133.50 Aligned_cols=100 Identities=18% Similarity=0.247 Sum_probs=83.3
Q ss_pred EEECCcC--CCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC-------C--CCCcCCCCCeEEEEEEe
Q 009127 50 ILINGQF--PGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY-------G--TTCPIPPGKNFTYVLQA 118 (543)
Q Consensus 50 ~~~Ng~~--pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p-------~--tq~~i~PG~~~~y~f~~ 118 (543)
|+|||+. ..|.|++++||+|+|++.|.....+.+|+||...... .+|.. . ....|.||++++|.|++
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 4789999999999999999998999999999864432 23421 1 23569999999999996
Q ss_pred --CCCcccceecCCchhhhhccceeEEEEecCCCC
Q 009127 119 --KDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPRI 151 (543)
Q Consensus 119 --~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~ 151 (543)
.+.+|+|+||||...+...||.|.|+|.+++..
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCC
Confidence 257999999999999999999999999987653
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.4e-12 Score=135.24 Aligned_cols=217 Identities=14% Similarity=0.108 Sum_probs=141.4
Q ss_pred EEEEEECCcCCCceEEEecCCEEEEEEEECCCC-CceeecCcc-cCCCCCCCCCCC----C--CCCcCCCCCeEEEEEEe
Q 009127 47 QQGILINGQFPGPQIDAVTNDNLIISVYNYLRE-PFLISWNGL-QQRRNSWQDGVY----G--TTCPIPPGKNFTYVLQA 118 (543)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~-~~~iH~HG~-~~~~~~~~DG~p----~--tq~~i~PG~~~~y~f~~ 118 (543)
...+++||+. .|.|.|+.| ++++|+.|.... ...+|+.|. .+. ..+.||.+ . ....|.|||+++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFI-QIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEE-EEccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 4678999996 699999885 999999999764 568898876 332 24689943 2 34669999999999999
Q ss_pred CCCccccee-cCCc--hhhhhccc-eeEEEEecCC--CCC----CC--CCCC--------CCceEEEeeeeeeccHHHHH
Q 009127 119 KDQIGSYFY-FPSF--LFHKAAGA-FGGIRIWSRP--RIP----VP--FPPP--------AGDFTVLAGDWYRSNHYVLR 178 (543)
Q Consensus 119 ~~~~Gt~wY-H~H~--~~q~~~Gl-~G~liV~~~~--~~~----~~--~~~~--------~~e~~l~~~d~~~~~~~~~~ 178 (543)
.+.+|.++. .+-. +.....+. ...+-+.... ..+ .| +... +.+..+.+...
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~--------- 377 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT--------- 377 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE---------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee---------
Confidence 644676332 1111 00000011 1222232211 000 11 0000 00011111110
Q ss_pred HHhccCCCCCCCCeEEEcCCCCC-cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCc--------------
Q 009127 179 RLLDSGHNLPFPDGLLINGRGWN-GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGS-------------- 243 (543)
Q Consensus 179 ~~~~~g~~~~~~~~~liNG~~~~-~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~-------------- 243 (543)
+.. .....++|||+.+. ...+.++.|++++|.|.|.+.. .|+||||||.|+|++.+|.
T Consensus 378 --~~~----~g~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~ 450 (513)
T 2wsd_A 378 --QDE----YGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELSYT 450 (513)
T ss_dssp --ECT----TSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBS
T ss_pred --cCC----CCCceEeECCccCCCcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCccccccccccccccc
Confidence 000 01125789999862 3456899999999999999875 8999999999999998752
Q ss_pred -c------ccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeecc
Q 009127 244 -H------TLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 244 -~------~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~ 282 (543)
. -++..+|++.|.||+++.|++++++.+|.|.++|+...
T Consensus 451 ~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~ 496 (513)
T 2wsd_A 451 GPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALE 496 (513)
T ss_dssp SCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHH
T ss_pred CCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChh
Confidence 1 12357899999999999999999657999999998753
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=5e-12 Score=135.73 Aligned_cols=241 Identities=14% Similarity=0.042 Sum_probs=146.3
Q ss_pred EEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCc-------ccCCCCCCCCCCC----C--CCCcCCCCCeE
Q 009127 47 QQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNG-------LQQRRNSWQDGVY----G--TTCPIPPGKNF 112 (543)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG-------~~~~~~~~~DG~p----~--tq~~i~PG~~~ 112 (543)
...+++||+. .|.|.|+.| ++|+|+.|... ....++++| ..+. ....||.+ . ....|.|||++
T Consensus 201 gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccEE
Confidence 4679999995 799999985 99999999975 456788876 2222 24689852 2 44679999999
Q ss_pred EEEEEeCCCcc-cceecCCchhh--h-----hccceeEEEEecCCCCCCCCCCCCCceEEEeeeee-eccHHHHHHHhcc
Q 009127 113 TYVLQAKDQIG-SYFYFPSFLFH--K-----AAGAFGGIRIWSRPRIPVPFPPPAGDFTVLAGDWY-RSNHYVLRRLLDS 183 (543)
Q Consensus 113 ~y~f~~~~~~G-t~wYH~H~~~q--~-----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~-~~~~~~~~~~~~~ 183 (543)
+.-+++.+.+| +||........ . .....+.+-+........+. ....+..+.... ..........+..
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~~ 354 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFRF 354 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEEC
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEEE
Confidence 99999964467 58876532100 0 00111222222211100000 000000000000 0000000000000
Q ss_pred CCCCCCCCeEEEcCCCCC---cc-eEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEE-cCc---cccc---cccCe
Q 009127 184 GHNLPFPDGLLINGRGWN---GY-TFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEV-EGS---HTLQ---NTYAA 252 (543)
Q Consensus 184 g~~~~~~~~~liNG~~~~---~p-~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~-DG~---~~~p---~~~~~ 252 (543)
+ .....|+|||+.+. .+ .++++.|++++|.|.|.+....|+||||||.|+|++. +|. ...+ ...|+
T Consensus 355 ~---~~~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDT 431 (534)
T 3abg_A 355 G---RTGPTWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDV 431 (534)
T ss_dssp S---CCCSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSE
T ss_pred e---ccCceeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCe
Confidence 0 01235789999862 12 4689999999999999886558999999999999999 663 1112 46899
Q ss_pred EEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecC
Q 009127 253 LDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSN 297 (543)
Q Consensus 253 v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~ 297 (543)
+.+.||+++.|.+.+.+.+|.|.++|+...... ....+.+.+..
T Consensus 432 V~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d-~GMm~~~~V~~ 475 (534)
T 3abg_A 432 VWLGRRETVVVEAHYAPFPGVYMFHCHNLIHED-HDMMAAFNATV 475 (534)
T ss_dssp ECCCSSEEEEEEEECCSCCEEEEEEESCHHHHH-TTCEEEEEECS
T ss_pred EEcCCCCEEEEEEEECCCCccEEEecChHHHHh-cCCceEEEEEe
Confidence 999999999999984337999999998753321 12334455543
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.34 E-value=2.3e-12 Score=137.70 Aligned_cols=95 Identities=18% Similarity=0.204 Sum_probs=75.0
Q ss_pred CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCc
Q 009127 43 LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQI 122 (543)
Q Consensus 43 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~ 122 (543)
++....+|++|+++|+|+|+|++||+|+++++|.....-. +||+.+.. .|+ ...|.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 5677899999999999999999999999999998653111 35554432 233 2679999999999999 589
Q ss_pred ccceecCCc---hhhhhccceeEEEEecCC
Q 009127 123 GSYFYFPSF---LFHKAAGAFGGIRIWSRP 149 (543)
Q Consensus 123 Gt~wYH~H~---~~q~~~Gl~G~liV~~~~ 149 (543)
|+||||||. ..| .||.|.|+|++++
T Consensus 567 GtY~yhC~e~Cg~~H--~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALH--MEMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTC--TTCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCc--cCCEEEEEEEcCC
Confidence 999999993 233 3999999999753
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.1e-10 Score=123.63 Aligned_cols=228 Identities=14% Similarity=0.100 Sum_probs=144.2
Q ss_pred EEEEEECCcCC----------------CceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCC
Q 009127 47 QQGILINGQFP----------------GPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTC 104 (543)
Q Consensus 47 ~~~~~~Ng~~p----------------gP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~ 104 (543)
...+++||+.. .++|+|++|+++++|+.|... ....+|++|..+.. ...||.+. ...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEE
Confidence 35688999742 379999999999999999965 45688998876543 46899762 345
Q ss_pred cCCCCCeEEEEEEeCCCcccceecCCchh-----hhhccceeEEEEecCCCCCCCCC-CC-CCceEEEeee--eeeccHH
Q 009127 105 PIPPGKNFTYVLQAKDQIGSYFYFPSFLF-----HKAAGAFGGIRIWSRPRIPVPFP-PP-AGDFTVLAGD--WYRSNHY 175 (543)
Q Consensus 105 ~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~-----q~~~Gl~G~liV~~~~~~~~~~~-~~-~~e~~l~~~d--~~~~~~~ 175 (543)
.|.|||+++..+++.+..|.||....... +....-.| ++.........|.. .. ..+. .+.+ .......
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~a-iL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~ 380 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATG-ILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHL 380 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEE-EEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSS
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEE-EEEECCCCCCCCCCCCCCccch--hhcccccccccCC
Confidence 69999999999999756899999987432 11111233 33333221111110 00 0000 0000 0000000
Q ss_pred --HHH------HHhccCCCCCCCCeEEEcCCCCC----cc-----------------eEEE----ecCCEEEEEEEEcC-
Q 009127 176 --VLR------RLLDSGHNLPFPDGLLINGRGWN----GY-----------------TFTV----EPGRTYRFRISNVG- 221 (543)
Q Consensus 176 --~~~------~~~~~g~~~~~~~~~liNG~~~~----~p-----------------~~~v----~~G~~~rlRiiN~~- 221 (543)
.+. ..+..+ ......+.|||..+. .| .+.+ +.|+++.|.|-|.+
T Consensus 381 ~~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~ 458 (580)
T 3sqr_A 381 ALDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTG 458 (580)
T ss_dssp CCBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSS
T ss_pred CCCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCc
Confidence 000 000000 001124677887541 11 2334 35999999999987
Q ss_pred -CcceEEEEEeCCeeEEEEEcCc------------cccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeecc
Q 009127 222 -LTTSINFRIQGHSMKLVEVEGS------------HTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 222 -~~~~~~~~i~g~~~~via~DG~------------~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~ 282 (543)
. ..|+||||||.|+|++.+.+ +..|...|++.+.||+.+.+.++++ .||.|.++|+...
T Consensus 459 ~~-~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~~ 530 (580)
T 3sqr_A 459 FG-IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIAW 530 (580)
T ss_dssp SC-CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSHH
T ss_pred cc-cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcHH
Confidence 4 48999999999999998532 2247789999999999999999999 7999999998653
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=99.21 E-value=4.8e-11 Score=99.57 Aligned_cols=78 Identities=12% Similarity=0.111 Sum_probs=62.6
Q ss_pred CCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCCcCCCCCeEEEEEEeCCCcccceecCCc
Q 009127 53 NGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSF 131 (543)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~ 131 (543)
+..|..+.|++++||+|++ .|..+..+++|+++. .||... .+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 4466678999999999755 699888889998762 356654 456789999999988 479999999986
Q ss_pred hhhhhccceeEEEEe
Q 009127 132 LFHKAAGAFGGIRIW 146 (543)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (543)
+. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 43 999999985
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.6e-11 Score=108.11 Aligned_cols=94 Identities=12% Similarity=0.022 Sum_probs=72.6
Q ss_pred EEecCCCcEEEEEEEeCCCC-CCCeeecCCCeEEE-------eecC--CCCCCCCCCCCCCCCCCcceeEEeCCCCEEEE
Q 009127 413 VMAANFREFVEIVFQNWEDT-VQSYHIDGYSFFVV-------GMDG--GQWTPASRTRYNLRDTVARSTTQVYPRSWTAI 482 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl-------~~~~--g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~i 482 (543)
.++++.|++|+|+|.|.+.. .|.||+|+..+.+. -... ..+.+.. ....++||..|.|++...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCCEEEE
Confidence 46789999999999999888 89999998653211 0100 0111110 1235789999999999999
Q ss_pred EEEecCcccceeeecchhhhhcccEEEEEEe
Q 009127 483 YMALDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 483 rf~adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|.+++||.|.||||+..|+. ||+..|.|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999999999 999999883
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.17 E-value=6.7e-10 Score=121.94 Aligned_cols=91 Identities=12% Similarity=0.111 Sum_probs=76.0
Q ss_pred CeEEEcCCCC-CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccc------------------------
Q 009127 191 DGLLINGRGW-NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT------------------------ 245 (543)
Q Consensus 191 ~~~liNG~~~-~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~------------------------ 245 (543)
..+.+||+.+ +...+.++.|++++|.|.|.+.. .|+||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (612)
T 3gyr_A 459 KTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEECSTTSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred ccccccCccCCCCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCc
Confidence 4578888875 35678999999999999999886 799999999999998765421
Q ss_pred ---cccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeecc
Q 009127 246 ---LQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 246 ---~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~ 282 (543)
++..+|++.+.+|+.+.|.+++.+.+|.|.++|+...
T Consensus 538 ~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~ 577 (612)
T 3gyr_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLE 577 (612)
T ss_dssp CTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHH
T ss_pred ccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChH
Confidence 2335799999999999999996658999999998754
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.15 E-value=3.7e-11 Score=100.19 Aligned_cols=84 Identities=12% Similarity=0.001 Sum_probs=65.9
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe-cCccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMAL-DNVGM 491 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a-dnpG~ 491 (543)
.+.++.|++|+| .|.+...|+||+||..|... .+. .. +....|+..+.||+...++|.+ +.||.
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~----~~------~~~~~~~~~i~pG~~~~~~f~~~~~~G~ 84 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKE----LA------DKLSHSQLMFSPGESYEITFSSDFPAGT 84 (105)
T ss_dssp EEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHH----HH------HHHCEEEEECSTTCEEEEEECTTSCSEE
T ss_pred EEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---ccc----cc------ccccccccccCCCCeEEEEEecCCCCee
Confidence 467899999876 48877899999999876431 000 00 0112588999999999999998 79999
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.|||| .|..+||++.+.|.
T Consensus 85 y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 85 YTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--CchhcCCEEEEEEc
Confidence 999999 69999999999985
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.2e-10 Score=97.21 Aligned_cols=83 Identities=16% Similarity=0.274 Sum_probs=63.5
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC-----CCCCcCCCCCeEEEEEEeCCCcccceecCCch
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY-----GTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL 132 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p-----~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (543)
.+.|++++||+|++ .|.....+++|+|+.... ..+|.. .+...+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 47999999999765 588767888888875432 123320 123568999999999987557999999999
Q ss_pred hhhhccceeEEEEec
Q 009127 133 FHKAAGAFGGIRIWS 147 (543)
Q Consensus 133 ~q~~~Gl~G~liV~~ 147 (543)
.|...||.|.|+|.+
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 677789999999974
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-09 Score=96.25 Aligned_cols=90 Identities=10% Similarity=0.023 Sum_probs=67.2
Q ss_pred cCCCceEEEecCCEEEEEEEECCCC-CceeecCcccC-----------------CCCCCCCCCC-CCCCcCCCCCeEEEE
Q 009127 55 QFPGPQIDAVTNDNLIISVYNYLRE-PFLISWNGLQQ-----------------RRNSWQDGVY-GTTCPIPPGKNFTYV 115 (543)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~~~N~l~~-~~~iH~HG~~~-----------------~~~~~~DG~p-~tq~~i~PG~~~~y~ 115 (543)
+|--+.|+|++||+|+++++|.-.. .+++++|+... ...+..+... .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4545799999999999999998766 78888876421 0000011110 122458999999999
Q ss_pred EEeCCCcccceecCCchhhhhccceeEEEEe
Q 009127 116 LQAKDQIGSYFYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 116 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (543)
|+++ ++|+|+||||...|.. ||.|.|+|+
T Consensus 111 f~~~-~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTAP-AAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EECC-SSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EECC-CCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 9984 7999999999888888 999999984
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.89 E-value=4.2e-09 Score=86.85 Aligned_cols=79 Identities=15% Similarity=0.196 Sum_probs=63.6
Q ss_pred CCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCch
Q 009127 53 NGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL 132 (543)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (543)
|..|-...|++++||+|++.++|.....+++...+... ...+.||++.+|.|+. +++|+|.|+|.
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~-- 86 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICR-- 86 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECT--
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECc--
Confidence 44554469999999999999999977776666655422 1457899999999998 58999999996
Q ss_pred hhhhccceeEEEEe
Q 009127 133 FHKAAGAFGGIRIW 146 (543)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (543)
.+...||.|.|+|+
T Consensus 87 ~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 YHLLKGMEGKVIVK 100 (100)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred cccCCCCEEEEEEC
Confidence 46667999999996
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.88 E-value=3.7e-09 Score=88.15 Aligned_cols=84 Identities=12% Similarity=0.051 Sum_probs=63.2
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe-cCccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMAL-DNVGM 491 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a-dnpG~ 491 (543)
.+.++.|++|+|+ |.+...|+||+|+..+.. . .|. +. ....+|++.+.+|+...+.|.+ +.||.
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~----~~------~~~~~~~~~~~pG~~~~~~f~~~~~~G~ 85 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD----LA------KSLSHKQLLMSPGQSTSTTFPADAPAGE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH----HH------HHHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc----cc------hhccccceeeCCCCEEEEEEecCCCCce
Confidence 4678999999886 777788999999764311 0 000 00 0011467788899999998887 89999
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.|||| .|.++||++.+.|.
T Consensus 86 y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 86 YTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--ChhhcCcEEEEEEc
Confidence 999999 79999999999985
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.87 E-value=1.4e-08 Score=89.14 Aligned_cols=92 Identities=16% Similarity=0.123 Sum_probs=67.0
Q ss_pred cCCCceEEEecCCEEEEEEEE--CCCCCceeecCccc------------C----CCCCCCCCCC--CCCCcCCCCCeEEE
Q 009127 55 QFPGPQIDAVTNDNLIISVYN--YLREPFLISWNGLQ------------Q----RRNSWQDGVY--GTTCPIPPGKNFTY 114 (543)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~~~N--~l~~~~~iH~HG~~------------~----~~~~~~DG~p--~tq~~i~PG~~~~y 114 (543)
+|-.+.|+|++||+|+++++| .....++++++... . ...+..|... .....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 344479999999999999999 66677777776310 0 0000001111 11246899999999
Q ss_pred EEEeCCCcccceecCCchhhhhccceeEEEEec
Q 009127 115 VLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 115 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
.|++ +++|+|||||+...+...||.|.|+|.+
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 4799999999988888889999999974
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.83 E-value=7.1e-09 Score=89.96 Aligned_cols=78 Identities=13% Similarity=0.128 Sum_probs=56.6
Q ss_pred CCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCCcCCCCCeEEEEEEeCCCcccceecCCc
Q 009127 53 NGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSF 131 (543)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~ 131 (543)
+..|-.+.|++++||+|++ .|.....+++++... .+|... ....+.||++++|.| +++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455557999999999865 488766666665432 123222 334689999999988 379999999975
Q ss_pred hhhhhccceeEEEEe
Q 009127 132 LFHKAAGAFGGIRIW 146 (543)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (543)
+. ||.|.|+|+
T Consensus 122 H~----gM~G~I~V~ 132 (132)
T 3c75_A 122 HP----FMRGKVIVE 132 (132)
T ss_dssp CT----TCEEEEEEC
T ss_pred Cc----CCEEEEEEC
Confidence 32 999999985
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.80 E-value=4.3e-09 Score=86.36 Aligned_cols=80 Identities=18% Similarity=0.240 Sum_probs=59.0
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCC--CCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhh
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDG--VYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHK 135 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG--~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 135 (543)
.+.|++++||+|+ ++|.....+++|+|+...+. ..|. ...+...+.||+++++.|. ++|+|+|||+ .|.
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~--~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~ 87 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPS--GVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQ 87 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSCT--TCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCCC--ccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Ccc
Confidence 3789999999876 47887778999999863211 1111 0001245899999999884 6999999999 566
Q ss_pred hccceeEEEEe
Q 009127 136 AAGAFGGIRIW 146 (543)
Q Consensus 136 ~~Gl~G~liV~ 146 (543)
..||.|.|+|+
T Consensus 88 ~~gM~G~i~V~ 98 (98)
T 2plt_A 88 GAGMVGKIIVQ 98 (98)
T ss_dssp GGTCEEEEEEC
T ss_pred ccCCeEEEEEC
Confidence 77999999984
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.74 E-value=1.6e-08 Score=82.88 Aligned_cols=81 Identities=16% Similarity=0.239 Sum_probs=57.7
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
.+.|++++||+|++ .|.....+++++++...++. ..++.......+.||+++++.| +++|+|+|||+ .|...
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 46899999999765 48766788888887532100 0000001124589999999988 47999999999 56778
Q ss_pred cceeEEEEe
Q 009127 138 GAFGGIRIW 146 (543)
Q Consensus 138 Gl~G~liV~ 146 (543)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999985
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.74 E-value=1.8e-08 Score=81.27 Aligned_cols=76 Identities=22% Similarity=0.384 Sum_probs=56.6
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhh
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHK 135 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 135 (543)
|-.+.|++++||+|++ .|.....++++.++.. . . + .....+.||+++++.| +++|+|||||+ .+.
T Consensus 16 f~P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~--~--~--~--~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~ 80 (91)
T 1bxv_A 16 FEPSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP--E--L--S--HKDLAFSPGETFEATF---SEPGTYTYYCE--PHR 80 (91)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEETTCG--G--G--C--EEEEECSTTCEEEEEC---CSCEEEEEECT--TTG
T ss_pred EeCCEEEECCCCEEEE--EECCCCCcEEEEeCCC--c--c--C--cccceeCCCCEEEEEe---CCCEEEEEEeC--CCc
Confidence 3347999999999865 5776677888887621 0 0 0 0124688999998887 47999999999 555
Q ss_pred hccceeEEEEe
Q 009127 136 AAGAFGGIRIW 146 (543)
Q Consensus 136 ~~Gl~G~liV~ 146 (543)
..||.|.|+|+
T Consensus 81 ~~gM~g~i~V~ 91 (91)
T 1bxv_A 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCEEEEEEC
Confidence 66999999985
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.71 E-value=1.9e-08 Score=88.38 Aligned_cols=96 Identities=9% Similarity=-0.009 Sum_probs=70.7
Q ss_pred EEecCCCcEEEEEEEe--CCCCCCCeeecCC--CeEEEe-ec--CC---CCCCCCCCCCCCCCCCcceeEEeCCCCEEEE
Q 009127 413 VMAANFREFVEIVFQN--WEDTVQSYHIDGY--SFFVVG-MD--GG---QWTPASRTRYNLRDTVARSTTQVYPRSWTAI 482 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N--~~~~~HP~HlHG~--~F~Vl~-~~--~g---~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~i 482 (543)
.++++.|++|+|++.| .+.+.|.||++.. .|.-+. .+ .+ .|-+.. -....+++|..|.+|....+
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP-----DTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT-----TCTTEEEECCCBCTTEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCcc-----ccccccccceeeCCCceeEE
Confidence 3678899999999999 6678999999853 121100 00 00 010000 00134788999999999999
Q ss_pred EEEecCcccceeeecchhhhhcccEEEEEEe
Q 009127 483 YMALDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 483 rf~adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|.++.||.|.|||++..|...||...+.|.
T Consensus 109 ~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 109 TFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999885
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.67 E-value=6.9e-08 Score=79.08 Aligned_cols=78 Identities=12% Similarity=-0.045 Sum_probs=60.2
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCc-ceeEEeCCCCEEEEEEEecCccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVA-RSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~-rDTv~vp~~g~v~irf~adnpG~ 491 (543)
.+.++.|++|.|+ |.+...|.||+|+..+- +.. .+.| +|+..+.+|+...+.| +.||.
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~---------------~~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADT---------------AAKLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHH---------------HHHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--ccc---------------cccccccccccCCCCEEEEEc--CCCeE
Confidence 4788999999887 77678899999874321 000 0012 5788999999888866 89999
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.|||| .|..+||++.+.|.
T Consensus 79 y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 79 YTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CccccCCeEEEEEC
Confidence 999999 59999999999883
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=5.5e-08 Score=79.52 Aligned_cols=76 Identities=18% Similarity=0.332 Sum_probs=55.9
Q ss_pred ceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC---CCCCcCCCCCeEEEEEEeCCCcccceecCCchhhh
Q 009127 59 PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY---GTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHK 135 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p---~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 135 (543)
+.|++++||+|+ +.|.-...++++.++... .+|.. .....+.||+++++.| +++|+|+|||+ .|.
T Consensus 19 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTVE--FVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEEE--EEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 689999999964 558765677777776432 11211 1124589999999988 47999999999 566
Q ss_pred hccceeEEEEe
Q 009127 136 AAGAFGGIRIW 146 (543)
Q Consensus 136 ~~Gl~G~liV~ 146 (543)
..||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 67999999984
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.1e-07 Score=80.94 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=53.6
Q ss_pred ceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhcc
Q 009127 59 PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAG 138 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~G 138 (543)
..|+|++||+|++.+.|. ++++..+.. ..-+|. ....+.||++++|.| +++|+|||+|. .|...|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~--~~f~~~pg~t~s~TF---~~pG~y~y~C~--~H~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGV--ESFKSKINESYTLTV---TEPGLYGVKCT--PHFGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CCCcCC
Confidence 699999999988877762 333332211 011232 124567999999988 47999999998 667789
Q ss_pred ceeEEEEecC
Q 009127 139 AFGGIRIWSR 148 (543)
Q Consensus 139 l~G~liV~~~ 148 (543)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999973
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.65 E-value=6.6e-08 Score=79.20 Aligned_cols=80 Identities=18% Similarity=0.151 Sum_probs=60.7
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|++|+| .|.+...|.||+|+..+ +.. .+. ...++|+..+.+|+...++| +.||.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~-----------p~~---~~~-~~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGFPHNIVFDEDAI-----------PSG---VNA-DAISRDDYLNAPGETYSVKL--TAAGEY 79 (98)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEECGGGS-----------CTT---CCH-HHHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCC-----------CCc---ccc-ccccccceecCCCCEEEEEe--CCCeEE
Confidence 477899999987 68777899999987421 000 000 01246889999999888865 689999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|||| .|.++||++.+.|.
T Consensus 80 ~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 80 GYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp EEECG--GGGGGTCEEEEEEC
T ss_pred EEEcC--CccccCCeEEEEEC
Confidence 99999 59999999999883
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.63 E-value=6.8e-08 Score=79.74 Aligned_cols=79 Identities=11% Similarity=0.070 Sum_probs=55.5
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCC--------CCCCCCCCCcCCCCCeEEEEEEeCCCcccceecC
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSW--------QDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFP 129 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~--------~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~ 129 (543)
.+.|+|++||+|+ +.|.-...++++++.- .... +.+.......+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEe
Confidence 4789999999976 4587656777776621 0000 001100124579999999988 4799999999
Q ss_pred CchhhhhccceeEEEEe
Q 009127 130 SFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 130 H~~~q~~~Gl~G~liV~ 146 (543)
+ .|...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 67778999999985
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.62 E-value=5e-08 Score=83.59 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=53.5
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
.+.|+|++||+|++.+.|. ++++..+.- ..-||. ....+.||++++|.| +++|+|||||. .|...
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~--~~f~s~pGet~s~TF---~~pG~y~y~C~--~H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGA--ETWKGKINEEITVTL---SKPGVYMYQCA--PHVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTC--CCCBCCTTCCCEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CCCcC
Confidence 3799999999987766653 333332211 011222 124567999988888 47999999998 45678
Q ss_pred cceeEEEEecCC
Q 009127 138 GAFGGIRIWSRP 149 (543)
Q Consensus 138 Gl~G~liV~~~~ 149 (543)
||.|.|+|.++.
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999999854
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1e-07 Score=76.76 Aligned_cols=72 Identities=13% Similarity=0.089 Sum_probs=58.0
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|+++.|+ |.+...|.+|+|+. . +...++..+.+|+...+.| +.||.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~~H~v~~~~~---------~--------------~~~~~~~~~~~g~~~~~~f--~~~G~y 72 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLAPHNVVVEGQ---------P--------------ELSHKDLAFSPGETFEATF--SEPGTY 72 (91)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEETTC---------G--------------GGCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCC---------C--------------ccCcccceeCCCCEEEEEe--CCCEEE
Confidence 4678999999876 76668899999872 0 0124778899999877765 899999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|||| .|...||.+.+.|.
T Consensus 73 ~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 73 TYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEEeC--CCccCCCEEEEEEC
Confidence 99999 69999999999883
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=98.56 E-value=1.2e-07 Score=80.77 Aligned_cols=76 Identities=12% Similarity=0.069 Sum_probs=53.5
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
...|+|++||+|++. |.. .++++..+... .-+|. ....+.||++++|.| +++|+|||||- .|...
T Consensus 21 P~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~-----~p~g~--~~~~~~pg~t~s~TF---~~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFV--PTD-KSHNAESVREV-----WPEGV--APVKGGFSKEVVFNA---EKEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SSEEEECTTCEEEEE--CSS-SSCCCEECTTT-----SCTTS--CCCBCCTTCCEEEEC---CSSEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEEE--ECC-CCccEEEeCCc-----CCCCc--cccccCCCCEEEEEe---CCCeEEEEEcC--CCCcC
Confidence 379999999997655 443 45555444211 11222 124567999999888 46999999995 66778
Q ss_pred cceeEEEEecC
Q 009127 138 GAFGGIRIWSR 148 (543)
Q Consensus 138 Gl~G~liV~~~ 148 (543)
||.|.|+|.++
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999874
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.9e-07 Score=76.58 Aligned_cols=77 Identities=19% Similarity=0.303 Sum_probs=56.3
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC-------CCCCcCCCCCeEEEEEEeCCCcccceecCC
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY-------GTTCPIPPGKNFTYVLQAKDQIGSYFYFPS 130 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p-------~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H 130 (543)
.+.|++++||+|++ +|.....+++++++...+ +|.- .....+.||+++++.|+ ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 36999999998755 788666777777653211 2211 01235789999998873 6999999999
Q ss_pred chhhhhccceeEEEEe
Q 009127 131 FLFHKAAGAFGGIRIW 146 (543)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (543)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 56777999999984
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.54 E-value=2.7e-07 Score=75.65 Aligned_cols=77 Identities=17% Similarity=0.304 Sum_probs=57.2
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC-------CCCCcCCCCCeEEEEEEeCCCcccceecCC
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY-------GTTCPIPPGKNFTYVLQAKDQIGSYFYFPS 130 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p-------~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H 130 (543)
.+.|++++||+|+ ++|.....+++++++... .+|.. .....+.||+++++.|. ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKIT--FKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC
Confidence 3689999999865 578876778888876422 12221 01235789999999884 6999999999
Q ss_pred chhhhhccceeEEEEe
Q 009127 131 FLFHKAAGAFGGIRIW 146 (543)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (543)
.+...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 56677999999984
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.5e-07 Score=76.81 Aligned_cols=78 Identities=12% Similarity=0.103 Sum_probs=58.6
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|.|+ |.+...|.+++++..+. .+ .. ...+++..+.+|+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~------~~------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ES------AP------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SC------HH------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----cc------cc------cccccceecCCCCEEEEEe--CCCeEE
Confidence 4678899998876 77667899999875441 00 00 0114677788888887766 899999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|||+ .|.++||.+.+.|.
T Consensus 79 ~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEECS--STTTTTCEEEEEEC
T ss_pred EEEcc--ChhhcCCEEEEEEC
Confidence 99999 69999999999883
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=98.45 E-value=4.5e-07 Score=76.19 Aligned_cols=74 Identities=15% Similarity=0.202 Sum_probs=58.4
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|+.++|++.|.+...|-|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 46788999999999999766555444321 125678899999999999999999
Q ss_pred eeeecchhhhhcccEEEEEEec
Q 009127 493 NIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~ 514 (543)
.||||+.-|... |.+.+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999999776554 999998863
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.39 E-value=7.9e-07 Score=72.82 Aligned_cols=82 Identities=10% Similarity=0.003 Sum_probs=59.6
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|.| .|.+...|.+|+++..|. .+ ++. .. ....+|++.+.+|+...+.| +.||.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~-----~~--~~~~~~~~~~~~G~~~~~~f--~~~G~y 80 (99)
T 1byp_A 18 DLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDV-----TK--ISMPEEDLLNAPGEEYSVTL--TEKGTY 80 (99)
T ss_dssp EEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HH--HSCCTTCCBCSTTCEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccc-----cc--ccccccceeeCCCCEEEEEe--CCCcEE
Confidence 477899999887 677778999999975431 00 000 00 00125667888999888766 699999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|||+ .|.++||.+.+.|.
T Consensus 81 ~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 81 KFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp EEECG--GGTTTTCEEEEEEC
T ss_pred EEEcC--CccccCCEEEEEEC
Confidence 99999 59999999999883
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.38 E-value=9.1e-07 Score=72.65 Aligned_cols=72 Identities=13% Similarity=0.135 Sum_probs=59.1
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|++|+|++.|.+...|.|.+.+.. -...+.+|....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~---------------------------~~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLG---------------------------IDVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGT---------------------------EEEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCC---------------------------cceeecCCcceeEEEecccCceE
Confidence 367899999999999998777877664422 12346778889999999999999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|+|.. |...||.+.+.|+
T Consensus 82 ~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEECcc--ccCCCCEEEEEEC
Confidence 999985 9999999999874
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=8.9e-07 Score=75.51 Aligned_cols=76 Identities=16% Similarity=0.124 Sum_probs=50.7
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
.+.|+|++||+|++ .|.-. .+++..+- ...-||.. .....||++++|.| +++|+|||+|. .|...
T Consensus 20 P~~i~V~~GdtV~f--~~~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCT--PHYAM 84 (123)
T ss_dssp SSEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCC-CeEEEEec-----ccCCCCcc--ceecCCCCEEEEEe---CCCEEEEEEeC--CcccC
Confidence 47999999999765 44432 33333221 11112221 13456999988887 46999999997 46667
Q ss_pred cceeEEEEecC
Q 009127 138 GAFGGIRIWSR 148 (543)
Q Consensus 138 Gl~G~liV~~~ 148 (543)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999874
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=98.37 E-value=9.8e-07 Score=75.79 Aligned_cols=92 Identities=13% Similarity=0.080 Sum_probs=61.0
Q ss_pred cCCCceEEEecC-CEEEEEEEECCCCC-----c--eeecCcccC-------------CCCCCCCCCCC-CCCcCCCCCeE
Q 009127 55 QFPGPQIDAVTN-DNLIISVYNYLREP-----F--LISWNGLQQ-------------RRNSWQDGVYG-TTCPIPPGKNF 112 (543)
Q Consensus 55 ~~pgP~i~v~~G-d~v~i~~~N~l~~~-----~--~iH~HG~~~-------------~~~~~~DG~p~-tq~~i~PG~~~ 112 (543)
+|--..|.|++| |+|+|+|+|.-..+ + .|--+|... .-.+..|.--. ....|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 443358999999 99999999985432 2 222222100 00001111111 12458999999
Q ss_pred EEEEEeC--CCcccceecCCchhhhhccceeEEEEec
Q 009127 113 TYVLQAK--DQIGSYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 113 ~y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
++.|+++ .++|+|||.|-...|.. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999984 36999999998777777 8999999964
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=98.35 E-value=5.2e-07 Score=73.82 Aligned_cols=79 Identities=19% Similarity=0.170 Sum_probs=55.0
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC----C-CCCcCCCCCeEEEEEEeCCCcccceecCC
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY----G-TTCPIPPGKNFTYVLQAKDQIGSYFYFPS 130 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p----~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H 130 (543)
|-.+.|++++||+|++ .|.....+++....-. .-+|.- . +...+.||+++++.| +++|+|+|+|.
T Consensus 15 F~P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEF--VNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEEE--EECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEch
Confidence 3347999999999665 5776566666655421 112221 0 113589999999888 47999999997
Q ss_pred chhhhhccceeEEEEe
Q 009127 131 FLFHKAAGAFGGIRIW 146 (543)
Q Consensus 131 ~~~q~~~Gl~G~liV~ 146 (543)
. |...||.|.|+|+
T Consensus 85 ~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred h--hccCCCEEEEEEC
Confidence 5 5566999999985
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.32 E-value=1e-06 Score=75.18 Aligned_cols=76 Identities=12% Similarity=0.057 Sum_probs=50.9
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
.+.|+|++||+|++ .|.-. .+++..+. ...-||.. ...+.||++++|.| +++|+|+|+|. .|...
T Consensus 20 P~~i~V~~GdtV~f--~n~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIKF--LPTDK-GHNVETIK-----GMAPDGAD--YVKTTVGQEAVVKF---DKEGVYGFKCA--PHYMM 84 (123)
T ss_dssp SSEEEECTTCEEEE--ECSSS-SCCCEECT-----TSSCTTCC--CCBCCTTSCEEEEC---CSCEEEEEECS--TTTTT
T ss_pred CCEEEECCCCEEEE--EECCC-CcEEEEec-----ccCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeC--Ccccc
Confidence 37999999999665 55432 33333221 11112221 24467999988888 46999999997 46667
Q ss_pred cceeEEEEecC
Q 009127 138 GAFGGIRIWSR 148 (543)
Q Consensus 138 Gl~G~liV~~~ 148 (543)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999874
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.29 E-value=1e-06 Score=72.59 Aligned_cols=85 Identities=11% Similarity=-0.023 Sum_probs=58.6
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCc-ceeEEeCCCCEEEEEEEecCcc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVA-RSTTQVYPRSWTAIYMALDNVG 490 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~-rDTv~vp~~g~v~irf~adnpG 490 (543)
..++++.|++|+|+ |.+...|.++++.-... .+.+.... ..+.+ .+++.+.+|+...+.| +.||
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~pG~~~~~tf--~~~G 81 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL------KAASMDENDLLSEDEPSFKAKV--STPG 81 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH------HHTSCCTTCCBBTTBCEEEECC--CSCE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh------hcccccccceecCCCCEEEEEe--CCCe
Confidence 35788999999876 77777899998731100 00000000 00122 4677788898888766 8999
Q ss_pred cceeeecchhhhhcccEEEEEEe
Q 009127 491 MWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 491 ~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|.|||+ .|..+||.+.+.|.
T Consensus 82 ~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 82 TYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEEEeC--CCcccCCeEEEEEC
Confidence 9999999 69999999999883
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.8e-06 Score=75.96 Aligned_cols=92 Identities=18% Similarity=0.101 Sum_probs=60.9
Q ss_pred cCCCceEEE-ecCCEEEEEEEECCCCC-----ce--eecCccc---------C---CCCCCCCCCCC-CCCcCCCCCeEE
Q 009127 55 QFPGPQIDA-VTNDNLIISVYNYLREP-----FL--ISWNGLQ---------Q---RRNSWQDGVYG-TTCPIPPGKNFT 113 (543)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~~--iH~HG~~---------~---~~~~~~DG~p~-tq~~i~PG~~~~ 113 (543)
+|--..|.| ++||+|+|+|+|.-..+ +. |--+|.. . .-.+..|.-.. ....|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 554458999 99999999999986542 22 2212210 0 00000111111 124589999999
Q ss_pred EEEEeC-CCcccceecCCchhhhhccceeEEEEec
Q 009127 114 YVLQAK-DQIGSYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 114 y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
+.|+++ -++|+|||+|-...|.. ||.|.|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 999984 16999999998777777 8999999974
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.20 E-value=7.5e-06 Score=67.87 Aligned_cols=78 Identities=13% Similarity=0.128 Sum_probs=53.1
Q ss_pred CCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCCcCCCCCeEEEEEEeCCCcccceecCCc
Q 009127 53 NGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSF 131 (543)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~ 131 (543)
+..|-...|+|++||+|++. |.....+++...... .|... ....+.||+++++.| +++|+|+|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEEE--ECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 33444479999999998654 776555555443321 12111 223578999999888 479999999976
Q ss_pred hhhhhccceeEEEEe
Q 009127 132 LFHKAAGAFGGIRIW 146 (543)
Q Consensus 132 ~~q~~~Gl~G~liV~ 146 (543)
+. ||.|.|+|+
T Consensus 96 H~----~M~G~I~V~ 106 (106)
T 1id2_A 96 HP----FMRGKVIVE 106 (106)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 32 999999985
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=98.09 E-value=6.7e-06 Score=70.53 Aligned_cols=92 Identities=18% Similarity=0.127 Sum_probs=59.1
Q ss_pred cCCCceEEE-ecCCEEEEEEEECCCCC-----ce--eecCcccC-------------CCCCCCCCCCC-CCCcCCCCCeE
Q 009127 55 QFPGPQIDA-VTNDNLIISVYNYLREP-----FL--ISWNGLQQ-------------RRNSWQDGVYG-TTCPIPPGKNF 112 (543)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~~--iH~HG~~~-------------~~~~~~DG~p~-tq~~i~PG~~~ 112 (543)
+|--..|.| ++||+|+|+|+|.-..+ +. |--+|... .-.+..|.--. ....|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 443358999 99999999999986432 22 22222000 00001111111 12358999999
Q ss_pred EEEEEeCC-Ccc-cceecCCchhhhhccceeEEEEec
Q 009127 113 TYVLQAKD-QIG-SYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 113 ~y~f~~~~-~~G-t~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
++.|+++. ++| +|||.|....|.. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 99999840 355 4999998777777 8999999963
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.2e-05 Score=84.28 Aligned_cols=89 Identities=15% Similarity=0.166 Sum_probs=64.6
Q ss_pred EEEEEECCcCCCceEEEecCCEEEEEEEECC---CCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcc
Q 009127 47 QQGILINGQFPGPQIDAVTNDNLIISVYNYL---REPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIG 123 (543)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l---~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~G 123 (543)
..|...+-.|-.+.|+|++||+|++.++|.. +..+++...++ |+ ...+.||++.++.|++ +++|
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------GI---K~DaiPGrtnsvtFta-dkPG 612 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------GV---SMEISPQQTSSITFVA-DKPG 612 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TE---EEEECTTCEEEEEEEC-CSCE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------Cc---eeeeCCCCeEEEEEEc-CCCE
Confidence 3555566677668999999999999999963 23333322222 11 2457899999999999 5899
Q ss_pred cceecCCch-hhhhccceeEEEEecC
Q 009127 124 SYFYFPSFL-FHKAAGAFGGIRIWSR 148 (543)
Q Consensus 124 t~wYH~H~~-~q~~~Gl~G~liV~~~ 148 (543)
+|||+|..- .....+|.|.|+|+++
T Consensus 613 vY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 613 LHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEECCCcCCCCcccceEEEEEecC
Confidence 999999842 2223479999999873
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.08 E-value=4.1e-06 Score=68.45 Aligned_cols=83 Identities=13% Similarity=0.015 Sum_probs=58.6
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
..++++.|++|.| .|.+...|.++++...+- .+ .+ ... ....++.+.+.+|+...+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~-----~~~--~~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VD-----ASK--ISMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CC-----HHH--HCCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-cc-----ccc--cccccCccccCCCCEEEEEE--CCCce
Confidence 3578899999887 677777899999864320 00 00 000 00123556788898877765 69999
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.|||+ .|..+||.+.+.|.
T Consensus 80 y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 80 YSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEcC--CCcccCCEEEEEEC
Confidence 999999 59999999999883
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=98.05 E-value=2e-05 Score=67.41 Aligned_cols=91 Identities=16% Similarity=0.129 Sum_probs=58.8
Q ss_pred cCCCceEEE-ecCCEEEEEEEECCCCC-----ceeec--Cc---------ccC----CCCCCCCCCCC-CCCcCCCCCeE
Q 009127 55 QFPGPQIDA-VTNDNLIISVYNYLREP-----FLISW--NG---------LQQ----RRNSWQDGVYG-TTCPIPPGKNF 112 (543)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~~iH~--HG---------~~~----~~~~~~DG~p~-tq~~i~PG~~~ 112 (543)
+|--..|.| ++||+|+|+|+|.-..+ +++-+ .| +.. .-.+..|.--. ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 454458999 99999999999985432 33221 21 100 00000111001 12358999999
Q ss_pred EEEEEeCC-Cccc-ceecCCchhhhhccceeEEEEe
Q 009127 113 TYVLQAKD-QIGS-YFYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 113 ~y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 146 (543)
++.|+++. ++|+ |||.|....|.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999841 3676 999998777777 899999984
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=98.02 E-value=1.2e-05 Score=68.86 Aligned_cols=92 Identities=21% Similarity=0.162 Sum_probs=59.8
Q ss_pred cCCCceEEE-ecCCEEEEEEEECCCCC-----ceeec--Cc---------cc----CCCCCCCCCCCC-CCCcCCCCCeE
Q 009127 55 QFPGPQIDA-VTNDNLIISVYNYLREP-----FLISW--NG---------LQ----QRRNSWQDGVYG-TTCPIPPGKNF 112 (543)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~~iH~--HG---------~~----~~~~~~~DG~p~-tq~~i~PG~~~ 112 (543)
+|--..|.| ++|++|+|+++|.-..+ +++-+ .+ +. ..-.+..|.--. ....|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 454468999 99999999999986442 32211 11 00 000001111111 12357999999
Q ss_pred EEEEEeCC-Cccc-ceecCCchhhhhccceeEEEEec
Q 009127 113 TYVLQAKD-QIGS-YFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 113 ~y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
++.|+++. ++|+ |+|.|....|.. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 99999841 4885 999998777777 8999999963
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=98.01 E-value=9.3e-06 Score=69.06 Aligned_cols=74 Identities=9% Similarity=-0.011 Sum_probs=49.1
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
.+.|+|++||+|++ .|... .++++...- ..-+|. ....+.||++++|.| +++|+|||+|..+.
T Consensus 20 P~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~--~~~~~~~g~t~~~tF---~~~G~y~y~C~~H~---- 82 (122)
T 2ux6_A 20 PASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTPHP---- 82 (122)
T ss_dssp SSEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEEETTEE----
T ss_pred CCEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCc--ceeecCCCCEEEEEe---CCCEEEEEEeCCCc----
Confidence 37999999998665 45533 333333220 011222 124567999999888 47999999997532
Q ss_pred cceeEEEEecC
Q 009127 138 GAFGGIRIWSR 148 (543)
Q Consensus 138 Gl~G~liV~~~ 148 (543)
.|.|.|+|.+.
T Consensus 83 ~M~G~I~V~~~ 93 (122)
T 2ux6_A 83 FMVGVVQVGDA 93 (122)
T ss_dssp EEEEEEEESSS
T ss_pred cCEEEEEEeCC
Confidence 29999999874
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=97.94 E-value=1.8e-05 Score=65.47 Aligned_cols=72 Identities=10% Similarity=0.045 Sum_probs=50.8
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|++|+|+ |.+...|.+|+|... .|. ..+ ++-.+.+|+...+.| +.||.|
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~-------------~~~-~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE-------------AAL-KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc-------------ccc-cccccCCCCEEEEEe--CCCEEE
Confidence 4678899998885 877788999988521 110 001 222366787766555 899999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|||++ |. ||.+.+.|.
T Consensus 89 ~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--CC--CCEEEEEEC
Confidence 999998 65 999998873
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=97.92 E-value=1.9e-05 Score=70.04 Aligned_cols=84 Identities=12% Similarity=0.028 Sum_probs=60.0
Q ss_pred eEEecCCCcEEEEEEEeCC-CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCccee-------EEeCCCC--EEE
Q 009127 412 SVMAANFREFVEIVFQNWE-DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARST-------TQVYPRS--WTA 481 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDT-------v~vp~~g--~v~ 481 (543)
+.++++.|++|.+++.|.+ ...|-|-++.. +. .+... |...+. ..|.||+ ...
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~~-~~~~~---------~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKK-------GP-PYAVM---------PVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESC-------CS-CCCSS---------CCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------Cc-chhcc---------ccccccccccccccccCCCCceEEE
Confidence 3578999999999999974 45566555421 11 11100 001121 1567888 899
Q ss_pred EEEEecCcccceeeecchhhhhcccEEEEEEe
Q 009127 482 IYMALDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 482 irf~adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
+.|++ .||.+.||||+--|...||-..+.|.
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99999 99999999999999999999999873
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.82 E-value=4.1e-05 Score=81.89 Aligned_cols=76 Identities=9% Similarity=0.142 Sum_probs=60.6
Q ss_pred eEEecCCCcEEEEEEEeCCC---CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC
Q 009127 412 SVMAANFREFVEIVFQNWED---TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN 488 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~---~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn 488 (543)
..+.++.|+.|+|++.|.+. ..|.|+++++.+. ..+.||....+.|+++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 45778999999999999743 3788888764321 35778899999999999
Q ss_pred cccceeeecc---hhhhhcccEEEEEEecCC
Q 009127 489 VGMWNIRSEN---WARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 489 pG~w~~HCHi---l~Hed~GMm~~~~V~~p~ 516 (543)
||.|.||||. ..|. ||.+.+.|.+++
T Consensus 566 pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHM--EMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCT--TCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCcc--CCEEEEEEEcCC
Confidence 9999999993 4564 999999997653
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00059 Score=57.48 Aligned_cols=88 Identities=16% Similarity=0.176 Sum_probs=55.7
Q ss_pred cCCCceEEEec-CCEEEEEEEECCCCC-----c--eee---------cCcccC----CCCCCCCCCCC-CCCcCCCCCeE
Q 009127 55 QFPGPQIDAVT-NDNLIISVYNYLREP-----F--LIS---------WNGLQQ----RRNSWQDGVYG-TTCPIPPGKNF 112 (543)
Q Consensus 55 ~~pgP~i~v~~-Gd~v~i~~~N~l~~~-----~--~iH---------~HG~~~----~~~~~~DG~p~-tq~~i~PG~~~ 112 (543)
+|--..|.|++ |++|+|+|+|.-..+ + .|- --|+.. .-.+..|.... ....|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 45457999986 999999999996432 2 211 112210 00111122111 22348999999
Q ss_pred EEEEEeC--CCcccceecCCchhhhhccceeEEEEe
Q 009127 113 TYVLQAK--DQIGSYFYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 113 ~y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (543)
+..|+.+ .++|+|.|.|. .|. ||.|.++|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999986 26999999999 555 899999984
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00039 Score=58.94 Aligned_cols=75 Identities=9% Similarity=0.120 Sum_probs=51.3
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|+|+..+ ..|-+..+.. .+. .+. +.+.+.+|....+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~n~~---~~Hnv~~~~~----------~~p-~g~-----------~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---KSHNAESVRE----------VWP-EGV-----------APVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEECSS---SSCCCEECTT----------TSC-TTS-----------CCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEEECC---CCccEEEeCC----------cCC-CCc-----------cccccCCCCEEEEEe--CCCeEE
Confidence 4678999999988554 5666665421 111 110 112234677655555 899999
Q ss_pred eeeecchhhhhcccEEEEEEecCC
Q 009127 493 NIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
.|||- .|..+||.+.+.|.+|.
T Consensus 76 ~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 76 VLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEcC--CCCcCCCEEEEEECCCC
Confidence 99997 59999999999998764
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0011 Score=53.79 Aligned_cols=81 Identities=16% Similarity=0.145 Sum_probs=55.4
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
..++++.|++|.|+ |.+...|-+.+... .+ +.. ++. ...-.+...+.+|+...+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~----------~~-p~g---~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDED----------AV-PAG---VDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTT----------SS-CTT---CCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCC----------CC-ccc---ccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 35788999998886 66666777665531 11 000 000 00113457788898877766 89999
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.|+|-+ |..+||-+.+.|.
T Consensus 79 y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEchh--hccCCCEEEEEEC
Confidence 9999987 9999999999873
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0008 Score=55.46 Aligned_cols=72 Identities=15% Similarity=-0.049 Sum_probs=49.7
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|++|.|+ |.+...|-+++.... .+ . .-.++-.+.+|+...+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~----~----------~~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VG----E----------DAFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SS----S----------SCEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCC-------CC----c----------ccccccccCCCCEEEEEe--CCCEEE
Confidence 4678899999887 777677777664321 00 0 001333456777777665 899999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|+|-+ |. ||.+.+.|.
T Consensus 90 ~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--CC--CCEEEEEEC
Confidence 999988 66 999998873
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00054 Score=58.40 Aligned_cols=75 Identities=16% Similarity=0.054 Sum_probs=49.5
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|.|++.|. .|-+..+.. .+ ++.. +.+.+.+++...+. ++.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s~T--F~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEITVT--LSKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCEEE--CCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEEEE--eCCCeEE
Confidence 47789999999988763 455444321 01 1111 01112356655444 4899999
Q ss_pred eeeecchhhhhcccEEEEEEecCC
Q 009127 493 NIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
.|||-. |..+||.+.+.|.++.
T Consensus 77 ~y~C~~--H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 77 MYQCAP--HVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEeCC--CCcCCcEEEEEECcCC
Confidence 999994 9999999999998753
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0012 Score=56.84 Aligned_cols=72 Identities=15% Similarity=-0.036 Sum_probs=50.5
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|++|+|+ |.+...|-+++.... .| . . -.|+-.+.+|+...+.| +.||.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g----~---------~-~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VG----E---------D-AFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SS----S---------S-CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CC----c---------c-cccccccCCCCEEEEEc--CCCEEE
Confidence 4678899999886 777777877764321 00 0 0 11333466788777666 899999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|||-+ |. ||-+.+.|.
T Consensus 116 ~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--Cc--CCEEEEEEC
Confidence 999988 76 999999873
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0012 Score=55.89 Aligned_cols=73 Identities=8% Similarity=0.061 Sum_probs=49.6
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|.|++.|. .|-+..+.. .+ ++.. +.+.+.+++...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 47789999999998873 355544321 11 1110 011134677665555 899999
Q ss_pred eeeecchhhhhcccEEEEEEec
Q 009127 493 NIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~ 514 (543)
.|+|- .|..+||.+.+.|.+
T Consensus 75 ~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 75 GVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp EEECG--GGTTTTCEEEEEESS
T ss_pred EEEeC--CCCcCCcEEEEEECC
Confidence 99999 499999999999986
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0036 Score=53.86 Aligned_cols=73 Identities=15% Similarity=0.200 Sum_probs=52.7
Q ss_pred ceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCc--h-hhh
Q 009127 59 PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSF--L-FHK 135 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~--~-~q~ 135 (543)
..|.++.|++|++.++|. +.. |+..... .|. ...+.||+.-++.|++ +++|+|+|+|.- + .|
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~-----Hsf~ip~----~~~---k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H- 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEG----TNI---NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH- 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSC-----EEEEETT----SSC---EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS-
T ss_pred CEEEEcCCCEEEEEEEeC-Ccc-----ceEEecC----CCc---eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc-
Confidence 489999999999999997 333 3332221 111 1346799989999998 589999999963 2 23
Q ss_pred hccceeEEEEec
Q 009127 136 AAGAFGGIRIWS 147 (543)
Q Consensus 136 ~~Gl~G~liV~~ 147 (543)
.+|.|.++|.+
T Consensus 125 -~~M~g~v~V~~ 135 (135)
T 2cua_A 125 -QNMFGTIVVKE 135 (135)
T ss_dssp -TTCEEEEEEEC
T ss_pred -CCCEEEEEEEC
Confidence 48999998864
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=96.85 E-value=0.006 Score=54.33 Aligned_cols=86 Identities=12% Similarity=0.069 Sum_probs=60.2
Q ss_pred EEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCccccee
Q 009127 48 QGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFY 127 (543)
Q Consensus 48 ~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wY 127 (543)
.+...+-++--..|.++.|++|++.++|. +-.++....++.. +..+.||+...+.|++ +++|+|++
T Consensus 82 ~m~a~~~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi------------k~da~PG~~n~~~~~~-~kpG~y~g 147 (168)
T 3s8f_B 82 YVLAFAFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGTNI------------NVEVLPGEVSTVRYTF-KRPGEYRI 147 (168)
T ss_dssp EEEEETTEEESSSEEEETTSEEEEEEECS-SSCEEEEETTSSC------------EEEECTTBCEEEEEEC-CSCEEEEE
T ss_pred EEEEEeceEecCEEEEeCCCeEEEEEecC-CceEEEEECCCCe------------EEEecCCceeEEEEEe-CCCEEEEE
Confidence 33444444434689999999999999997 4443333332211 2346799999999998 58999999
Q ss_pred cCCc-hhhhhccceeEEEEec
Q 009127 128 FPSF-LFHKAAGAFGGIRIWS 147 (543)
Q Consensus 128 H~H~-~~q~~~Gl~G~liV~~ 147 (543)
.|.- -.....+|.|-++|++
T Consensus 148 ~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 148 ICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp ECCSCCSTTGGGCEEEEEEEC
T ss_pred ECCcCCCCCcCCCEEEEEEeC
Confidence 9983 3344457999999874
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0086 Score=50.61 Aligned_cols=73 Identities=10% Similarity=0.049 Sum_probs=46.9
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|.|+..+. .|-+.++- +.. ++.... +.+.+|.... ++++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~-p~~~~~-----------~~~~pG~t~~--~tF~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------DMI-PEGAEK-----------FKSKINENYV--LTVTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------TCS-CTTCCC-----------CBCCTTCCEE--EECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------ccC-CCCccc-----------eecCCCCEEE--EEeCCCEEE
Confidence 46788999998876543 35544431 101 111101 1123666544 455899999
Q ss_pred eeeecchhhhhcccEEEEEEec
Q 009127 493 NIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~ 514 (543)
.|+|-. |..+||.+.+.|.+
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGD 94 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESS
T ss_pred EEEeCC--cccCCCEEEEEEcC
Confidence 999984 99999999999976
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0084 Score=50.65 Aligned_cols=36 Identities=11% Similarity=0.176 Sum_probs=29.6
Q ss_pred CCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEec
Q 009127 475 YPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 475 p~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~ 514 (543)
.+|+...+ +++.||.|.|+|-. |..+||.+.+.|.+
T Consensus 59 ~pG~t~~~--tF~~~G~y~y~C~~--H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 59 TVGQEAVV--KFDKEGVYGFKCAP--HYMMGMVALVVVGD 94 (123)
T ss_dssp CTTSCEEE--ECCSCEEEEEECST--TTTTTCEEEEEESS
T ss_pred CCCCEEEE--EeCCCeEEEEEeCC--ccccCCEEEEEEcC
Confidence 46776554 45899999999985 99999999999976
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=96.01 E-value=0.017 Score=60.72 Aligned_cols=75 Identities=11% Similarity=0.137 Sum_probs=58.8
Q ss_pred eEEecCCCcEEEEEEEeCC---CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC
Q 009127 412 SVMAANFREFVEIVFQNWE---DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN 488 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~---~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn 488 (543)
..+.++.|+.|+|++.|.+ +..|.|.+.+... -+.+.||....+.|+++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCC
Confidence 4577899999999999974 5677777654321 124667888999999999
Q ss_pred cccceeeecchhhh-hcccEEEEEEe
Q 009127 489 VGMWNIRSENWARQ-YLGQQFYLRVY 513 (543)
Q Consensus 489 pG~w~~HCHil~He-d~GMm~~~~V~ 513 (543)
||.|.+||...-|. +.+|.+.+.|+
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CEEEEEECCCcCCCCcccceEEEEEe
Confidence 99999999976654 56899999885
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.031 Score=49.70 Aligned_cols=87 Identities=5% Similarity=-0.035 Sum_probs=60.5
Q ss_pred EEec-CCCcEEEEEEEeCCCCC-----CCeeecCCCeEEEeecC-----------C--CCCCCCCCCCCCCCCCcceeEE
Q 009127 413 VMAA-NFREFVEIVFQNWEDTV-----QSYHIDGYSFFVVGMDG-----------G--QWTPASRTRYNLRDTVARSTTQ 473 (543)
Q Consensus 413 ~~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~~~-----------g--~~~~~~~~~~~~~~p~~rDTv~ 473 (543)
.+++ +.|+.|.|+|.|.+..+ |-|- +...+. + .+-+.+ .......+..
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~v-------i~~~~~~~~v~~~~m~~~~~~~v~~~------d~~vl~~t~~ 125 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLV-------IAKAEDMDGVFKDGVGAADTDYVKPD------DARVVAHTKL 125 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCE-------EEEGGGHHHHHHHHGGGGGGTTSCTT------CTTEEEECCC
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEE-------eccCcchhhhHHHhhhcccccccccc------ccchhcccee
Confidence 4778 89999999999987653 4433 322210 0 000000 0012334667
Q ss_pred eCCCCEEEEEEEec--CcccceeeecchhhhhcccEEEEEEe
Q 009127 474 VYPRSWTAIYMALD--NVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 474 vp~~g~v~irf~ad--npG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.+|+...|.|.++ .||.|-|+|-+--|.. ||-+.+.|.
T Consensus 126 l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 126 IGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp BCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 88999999999988 8999999999988988 899999886
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=95.39 E-value=0.047 Score=46.80 Aligned_cols=70 Identities=11% Similarity=0.174 Sum_probs=50.2
Q ss_pred EecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccce
Q 009127 414 MAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWN 493 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~ 493 (543)
+.++.|+.|+|++.|.+ ..|. |.|-+.+ . -+.+.||....+.|.++.||.|.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hs-------f~ip~~~-----------------~---k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHG-------FHVEGTN-----------------I---NVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEE-------EEETTSS-----------------C---EEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccce-------EEecCCC-----------------c---eeEeCCCCcEEEEEEcCCCEEEE
Confidence 56789999999999974 3343 4431110 0 13345677788999999999999
Q ss_pred eeecc---hhhhhcccEEEEEEe
Q 009127 494 IRSEN---WARQYLGQQFYLRVY 513 (543)
Q Consensus 494 ~HCHi---l~Hed~GMm~~~~V~ 513 (543)
++|.. ..| .+|-..+.|.
T Consensus 114 ~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTS--TTCEEEEEEE
T ss_pred EECcccCCCCc--CCCEEEEEEE
Confidence 99976 445 5899988886
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=95.10 E-value=0.036 Score=46.61 Aligned_cols=71 Identities=6% Similarity=0.011 Sum_probs=44.9
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|++|.|+. .+. .|-+++.. +.+. ..... +.+.+++...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~n--~d~-~H~v~~~~----------~~~p-~~~~~-----------~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFIP--TDK-GHNVETIK----------GMIP-DGAEA-----------FKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEEE--SSS-SCCCEECT----------TCSC-TTCCC-----------CBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEE--CCC-CcEEEEcc----------cccC-CCcce-----------eecCCCCEEEEEe--CCCEEE
Confidence 46788999988874 433 56655543 1111 10001 1224666655555 899999
Q ss_pred eeeecchhhhhcccEEEEEEec
Q 009127 493 NIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~ 514 (543)
.|+|-+ |.. |.+.+.|.+
T Consensus 75 ~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 75 GVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEETT--EEE--EEEEEEESS
T ss_pred EEEeCC--Ccc--CEEEEEEeC
Confidence 999988 655 999999976
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=94.94 E-value=0.082 Score=44.86 Aligned_cols=87 Identities=7% Similarity=0.001 Sum_probs=60.6
Q ss_pred EEecCCC-cEEEEEEEeCCCCC-----CCeeecCCCeEEEeecC-----------C---CCCCCCCCCCCCCCCCcceeE
Q 009127 413 VMAANFR-EFVEIVFQNWEDTV-----QSYHIDGYSFFVVGMDG-----------G---QWTPASRTRYNLRDTVARSTT 472 (543)
Q Consensus 413 ~~~~~~g-~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~~~-----------g---~~~~~~~~~~~~~~p~~rDTv 472 (543)
.++++.| +.+.+++.|.+..+ |-|- +...+. + .+.+.+ ..-....+.
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~v-------i~~~~~~~~~~~~~m~~~~~~~~v~~~------~~~~~~~t~ 85 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHNWV-------LAKSADVGDVAKEGAHAGADNNFVTPG------DKRVIAFTP 85 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBCCE-------EEEGGGHHHHHHHHHTTCGGGTTSCTT------CTTCSEECC
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccceE-------EecCcchhhhHHHhhhccccccccccc------cccceeeee
Confidence 4778999 99999999987543 5443 332210 0 010000 001233456
Q ss_pred EeCCCCEEEEEEEec---CcccceeeecchhhhhcccEEEEEEe
Q 009127 473 QVYPRSWTAIYMALD---NVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 473 ~vp~~g~v~irf~ad---npG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|.||+...+.|.++ .||.|-|.|-+--|.. ||-+.+.|.
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 688999999999997 8999999999888888 899999885
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=94.24 E-value=0.12 Score=43.69 Aligned_cols=91 Identities=7% Similarity=-0.036 Sum_probs=59.7
Q ss_pred EEec-CCCcEEEEEEEeCCCCC-----CCeeecCCCeEEEeecCCCCCC--------CCCCCC-CCCC-CCcceeEEeCC
Q 009127 413 VMAA-NFREFVEIVFQNWEDTV-----QSYHIDGYSFFVVGMDGGQWTP--------ASRTRY-NLRD-TVARSTTQVYP 476 (543)
Q Consensus 413 ~~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~~~g~~~~--------~~~~~~-~~~~-p~~rDTv~vp~ 476 (543)
.+++ +.|+.+.+++.|.+..+ |-|-| ...+ .... .....| .-.+ .....|..|.|
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi-------~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVV-------SKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCEE-------EETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEEE-------cccc--chhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 4678 78999999999987653 65433 2211 0000 000000 0001 11234556899
Q ss_pred CCEEEEEEEec--Cccc-ceeeecchhhhhcccEEEEEEe
Q 009127 477 RSWTAIYMALD--NVGM-WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 477 ~g~v~irf~ad--npG~-w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|+...+.|.+. .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999988888 999999885
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=93.49 E-value=0.24 Score=43.86 Aligned_cols=73 Identities=11% Similarity=0.172 Sum_probs=53.8
Q ss_pred EecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccce
Q 009127 414 MAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWN 493 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~ 493 (543)
+.++.|+.++|.+.|. +..|.|-+=... .. +.+-||..-.+.|.++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lg------------------------ik---~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTN------------------------IN---VEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSS------------------------CE---EEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCC------------------------eE---EEecCCceeEEEEEeCCCEEEE
Confidence 5578999999999997 455665542211 11 2344677788999999999999
Q ss_pred eeecc-hhhhhcccEEEEEEec
Q 009127 494 IRSEN-WARQYLGQQFYLRVYS 514 (543)
Q Consensus 494 ~HCHi-l~Hed~GMm~~~~V~~ 514 (543)
+.|.. --+.+.+|.+.+.|.+
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEEC
T ss_pred EECCcCCCCCcCCCEEEEEEeC
Confidence 99985 4466789999998863
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=93.31 E-value=0.25 Score=41.86 Aligned_cols=91 Identities=7% Similarity=-0.045 Sum_probs=59.3
Q ss_pred EEec-CCCcEEEEEEEeCCCCC-----CCeeecCCCeEEEeecCCCCCC--------CCCCCCCC-CC-CCcceeEEeCC
Q 009127 413 VMAA-NFREFVEIVFQNWEDTV-----QSYHIDGYSFFVVGMDGGQWTP--------ASRTRYNL-RD-TVARSTTQVYP 476 (543)
Q Consensus 413 ~~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~~~g~~~~--------~~~~~~~~-~~-p~~rDTv~vp~ 476 (543)
.+++ +.|+.+.+++.|.+..+ |-|-| ...+ .... .....|-. .+ .....+..|.|
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVL-------TKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBCCEE-------EEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcceEEE-------cCcc--chhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 4778 88999999999987653 54433 2221 0000 00000000 00 11234556889
Q ss_pred CCEEEEEEEec--Cccc-ceeeecchhhhhcccEEEEEEe
Q 009127 477 RSWTAIYMALD--NVGM-WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 477 ~g~v~irf~ad--npG~-w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|+...|.|.++ .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7876 999999888888 899999885
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=92.89 E-value=0.45 Score=40.18 Aligned_cols=92 Identities=8% Similarity=-0.028 Sum_probs=58.9
Q ss_pred EEec-CCCcEEEEEEEeCCCCC-----CCeeecCCCeEEEeecCC------CCCCCCCCCC-CCCC-CCcceeEEeCCCC
Q 009127 413 VMAA-NFREFVEIVFQNWEDTV-----QSYHIDGYSFFVVGMDGG------QWTPASRTRY-NLRD-TVARSTTQVYPRS 478 (543)
Q Consensus 413 ~~~~-~~g~~v~~~i~N~~~~~-----HP~HlHG~~F~Vl~~~~g------~~~~~~~~~~-~~~~-p~~rDTv~vp~~g 478 (543)
.+++ +.|+.+.+++.|.+..+ |-|-| ...+.- .........| .-.+ .....|-.|.||+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 4778 89999999999987553 55443 221100 0000000000 0001 1123455689999
Q ss_pred EEEEEEEec--Cccc-ceeeecchhhhhcccEEEEEE
Q 009127 479 WTAIYMALD--NVGM-WNIRSENWARQYLGQQFYLRV 512 (543)
Q Consensus 479 ~v~irf~ad--npG~-w~~HCHil~Hed~GMm~~~~V 512 (543)
...+.|.+. .||. |-|.|-+--|.. ||-+.+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999998 7877 999999988888 89998887
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=89.57 E-value=1.4 Score=36.87 Aligned_cols=96 Identities=6% Similarity=0.005 Sum_probs=58.2
Q ss_pred eEEecCC-CcEEEEEEEeCCCCCCCeeecCCCeEEEeecCC-CC--CC--CC-CCCC-C-CCCCCcceeEEeCCCCEEEE
Q 009127 412 SVMAANF-REFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGG-QW--TP--AS-RTRY-N-LRDTVARSTTQVYPRSWTAI 482 (543)
Q Consensus 412 ~~~~~~~-g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g-~~--~~--~~-~~~~-~-~~~p~~rDTv~vp~~g~v~i 482 (543)
.-++++. |+.+.++|.|.+..+ --.=||.|-+...+.- .. .. .. ...| . -.......|..|.||+...|
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~v 95 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLP--KNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSV 95 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCC--HHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEE
T ss_pred CEEEEecCCCEEEEEEEECCccc--ccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEE
Confidence 3477875 999999999997552 1111234433321100 00 00 00 0011 0 01234556778999999999
Q ss_pred EEEec---CcccceeeecchhhhhcccEEEEEEe
Q 009127 483 YMALD---NVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 483 rf~ad---npG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|.+. .+|.|-|-|- -|. ||-+.+.|.
T Consensus 96 tf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 96 TFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 99987 8999999999 788 999998873
|
| >3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=82.54 E-value=8.4 Score=31.80 Aligned_cols=71 Identities=20% Similarity=0.362 Sum_probs=49.6
Q ss_pred cCCEE--EEEEEEcCCcceEEEEEe-CCeeEEEEE--cCcccc--------ccccCeEEEcCCCeEEEEEEeCC--CCcc
Q 009127 209 PGRTY--RFRISNVGLTTSINFRIQ-GHSMKLVEV--EGSHTL--------QNTYAALDIHLGQTYSVLVTMDQ--APQD 273 (543)
Q Consensus 209 ~G~~~--rlRiiN~~~~~~~~~~i~-g~~~~via~--DG~~~~--------p~~~~~v~l~pgeR~dv~v~~~~--~~g~ 273 (543)
.|+.+ .|.+.|.+.. ...+.+. |+.+.++-. +|..+- ........|.|||...+-+..++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 45544 5678898885 5666664 555454444 476541 23456899999999999999984 5899
Q ss_pred eEEEEee
Q 009127 274 YYIVVSS 280 (543)
Q Consensus 274 y~i~~~~ 280 (543)
|.+.+..
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 543 | ||||
| d1aoza3 | 214 | b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C | 6e-39 | |
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 1e-31 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 8e-30 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 9e-27 | |
| d1hfua1 | 131 | b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin | 2e-26 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 3e-26 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 1e-25 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 1e-24 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 3e-23 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 5e-23 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 7e-19 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 3e-15 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 9e-15 | |
| d1kv7a1 | 140 | b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch | 5e-13 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 4e-12 | |
| d2q9oa3 | 216 | b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce | 8e-11 | |
| d2bw4a1 | 157 | b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige | 2e-10 | |
| d1gska2 | 174 | b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba | 6e-10 | |
| d2j5wa1 | 192 | b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie | 1e-09 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 2e-08 | |
| d2j5wa5 | 149 | b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa | 5e-08 | |
| d1sdda1 | 180 | b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t | 8e-08 | |
| d1v10a3 | 190 | b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus | 1e-07 | |
| d1mzya1 | 153 | b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba | 1e-07 | |
| d1hfua3 | 200 | b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr | 2e-07 | |
| d1gska1 | 181 | b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci | 3e-07 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 9e-07 | |
| d1gyca3 | 199 | b.6.1.3 (A:301-499) Laccase {Trametes versicolor, | 1e-06 | |
| d2j5wa3 | 207 | b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap | 2e-06 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 9e-06 | |
| d2j5wa4 | 179 | b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap | 1e-05 | |
| d1kcwa2 | 146 | b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap | 4e-05 | |
| d1gska3 | 154 | b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba | 0.003 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 139 bits (351), Expect = 6e-39
Identities = 50/205 (24%), Positives = 78/205 (38%), Gaps = 21/205 (10%)
Query: 347 KISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMP------- 399
K +R I L N+ +NG ++AIN VS TP A + + F P
Sbjct: 4 KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDY 63
Query: 400 ---TSPNWGNAYLQTSVMAANFREFVEIVFQNWE------DTVQSYHIDGYSFFVVGMDG 450
T P + V E V+++ QN +H+ G+ F+V+G
Sbjct: 64 DIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 123
Query: 451 GQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYL 510
G+++ + NL++ R+T ++P WTAI DN G+W ++G
Sbjct: 124 GKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF 183
Query: 511 RVYSPANSWRDELPIPKNALLCGRA 535
IP AL CG
Sbjct: 184 AE-----GVEKVGRIPTKALACGGT 203
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 119 bits (298), Expect = 1e-31
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 160 GDFTVLAGDWYRSNHYVLRRLLDSGHN--LPFPDGLLINGRG------------------ 199
G+ +L DW+ + + L S + P +L+NGRG
Sbjct: 6 GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCK 65
Query: 200 ------WNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAAL 253
Y F V P +TYR RI++ ++NF I H + +VE +G++ + +
Sbjct: 66 LKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDI 125
Query: 254 DIHLGQTYSVLVTMDQAPQDYYIVVSSRF--TPRVLTTTAILHYSNSRRGVSGPIPGGPT 311
DI+ G++YSVL+T DQ P + Y V P +L+Y + P P
Sbjct: 126 DIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVS-KLPTSPPPQ 184
Query: 312 TEIAWSLNQARSIRWNLTASGPRP 335
T +++++ + +TA+ P
Sbjct: 185 TPAWDDFDRSKNFTYRITAAMGSP 208
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 112 bits (282), Expect = 8e-30
Identities = 46/150 (30%), Positives = 64/150 (42%), Gaps = 13/150 (8%)
Query: 160 GDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNG--------YTFTVEPGR 211
+ DWY S VL + P PD LING G N +V+ G+
Sbjct: 6 ASTVITIADWYHSLSTVL--FPNPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGK 63
Query: 212 TYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAP 271
YRFRI + + F I GH M ++EV+G T +L I GQ YSV+V +QA
Sbjct: 64 RYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAV 123
Query: 272 QDYYIVVSSRFTPRVL---TTTAILHYSNS 298
+Y+I + +AI Y +
Sbjct: 124 GNYWIRANPSNGRNGFTGGINSAIFRYQGA 153
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 104 bits (261), Expect = 9e-27
Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 14/151 (9%)
Query: 161 DFTVLA-GDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNG-------YTFTVEPGRT 212
D V D+Y L + PF D +LING N T+ PG+
Sbjct: 4 DLGVFPITDYYYRAADDLVHFTQNN-APPFSDNVLINGTAVNPNTGEGQYANVTLTPGKR 62
Query: 213 YRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQ 272
+R RI N + H+M ++ + T +L + +GQ Y V++ +AP
Sbjct: 63 HRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPD 122
Query: 273 DYYIVVSSRFTPRV-----LTTTAILHYSNS 298
+Y+ V+ AI HY+ +
Sbjct: 123 NYWFNVTFGGQAACGGSLNPHPAAIFHYAGA 153
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 101 bits (254), Expect = 2e-26
Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 32 TWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFL-----ISWN 86
T +T ++ P G + GIL+NG GP I NDN ++V N L P + I W+
Sbjct: 8 TMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWH 66
Query: 87 GLQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRI 145
GL QR +W DG G CPI PG F Y G+++Y F G G + I
Sbjct: 67 GLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVI 126
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 101 bits (253), Expect = 3e-26
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Query: 31 FTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFL-----ISW 85
+ + + P G + I++NG FP P I D ++V + L + I W
Sbjct: 6 ASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHW 65
Query: 86 NGLQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIR 144
+G Q +W DG CPI G +F Y DQ G+++Y G G
Sbjct: 66 HGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFV 125
Query: 145 I 145
+
Sbjct: 126 V 126
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 100 bits (251), Expect = 1e-25
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 21/153 (13%)
Query: 160 GDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNG-------YTFTVEPGRT 212
+ + DWY ++ PD LING+G VE G+
Sbjct: 11 ENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGRYVGGPAAELSIVNVEQGKK 63
Query: 213 YRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQ 272
YR R+ ++ + F I GH + ++EV+G T +T L I GQ YS ++ +Q
Sbjct: 64 YRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVD 123
Query: 273 DYYIVVSSRFTPRVL-------TTTAILHYSNS 298
+Y+I L +AIL Y+ +
Sbjct: 124 NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGA 156
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 98.3 bits (244), Expect = 1e-24
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 16/149 (10%)
Query: 160 GDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNG-------YTFTVEPGRT 212
+ DWY + + R D LING G + V+ G+
Sbjct: 12 ESTVITLTDWYHTAARLGPR------FPLGADATLINGLGRSASTPTAALAVINVQHGKR 65
Query: 213 YRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQ 272
YRFR+ ++ + F I GH++ ++EV+G ++ ++ I Q YS ++ +Q
Sbjct: 66 YRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVG 125
Query: 273 DYYIVVSSRFTPRVL---TTTAILHYSNS 298
+Y+I + F +AIL Y +
Sbjct: 126 NYWIRANPNFGTVGFAGGINSAILRYQGA 154
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 93.2 bits (231), Expect = 3e-23
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Query: 26 SPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYN-YLREPFLIS 84
S R + W++ Y P + + INGQFPGP I A D++++ + N E +I
Sbjct: 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 85 WNGLQQRRNSWQDGVYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGI 143
W+G+ QR W DG + C I PG+ F Y D G++FY ++AG +G +
Sbjct: 61 WHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSL 119
Query: 144 RI 145
+
Sbjct: 120 IV 121
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 92.8 bits (230), Expect = 5e-23
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 7/122 (5%)
Query: 31 FTWKITYGDIYPLGV-KQQGILINGQFPGPQIDAVTNDNLIISVYN-----YLREPFLIS 84
I ++ P G + + G P I +D I+V + +R I
Sbjct: 5 LDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIH 64
Query: 85 WNGLQQRRNSWQDGVYGTT-CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGI 143
W+G Q + DG CPI P ++F Y Q G+Y+Y G G
Sbjct: 65 WHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAF 124
Query: 144 RI 145
+
Sbjct: 125 VV 126
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 81.7 bits (201), Expect = 7e-19
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Query: 31 FTWKITYGDIYPLGV-KQQGILINGQFPGPQIDAVTNDNLIISVYNYLRE-PFLISWNGL 88
F + P GV K++ +LING GP I A D + ++V N L I W+G+
Sbjct: 38 FNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGI 97
Query: 89 QQRRNSWQDGV-YGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWS 147
Q+ + DG T CPIPP Q G+ +Y F G G I+I
Sbjct: 98 HQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQING 157
Query: 148 RPRIP 152
+P
Sbjct: 158 PASLP 162
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 71.2 bits (174), Expect = 3e-15
Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 11/155 (7%)
Query: 161 DFTVLAGDWY--RSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRIS 218
D V+ D + + + F D LL NG + P R R+
Sbjct: 10 DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP---QHAAPRGWLRLRLL 66
Query: 219 NVGLTTSINFR-IQGHSMKLVEVEGSHTLQ-NTYAALDIHLGQTYSVLVTMDQAPQDYYI 276
N S+NF + ++ +G + + L + +G+ + VLV ++ +
Sbjct: 67 NGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLV 126
Query: 277 VVSSRFTPRVLT----TTAILHYSNSRRGVSGPIP 307
+ + ++ SG +P
Sbjct: 127 TLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALP 161
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 69.7 bits (170), Expect = 9e-15
Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 13/132 (9%)
Query: 31 FTWKITYGD--IYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGL 88
FT I I G Q + NG PGP + D + +++ N + +
Sbjct: 35 FTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATN---AMPHNV 91
Query: 89 QQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYF----PSFLFHKAAGAFGGIR 144
+ + G + PG+ T +A D+ G++ Y +H +G G +
Sbjct: 92 EFHGATGALGGA-KLTNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLM 149
Query: 145 IWSRPRIPVPFP 156
+ PR + P
Sbjct: 150 V--LPRDGLKDP 159
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 64.4 bits (156), Expect = 5e-13
Identities = 26/119 (21%), Positives = 38/119 (31%), Gaps = 8/119 (6%)
Query: 31 FTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQ 90
I G G NG GP + + + +YN L E + W+GL+
Sbjct: 18 IQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEV 77
Query: 91 RRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL----FHKAAGAFGGIRI 145
DG IPPG + L + ++ P A G G + I
Sbjct: 78 --PGEVDGG--PQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVI 132
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 62.0 bits (150), Expect = 4e-12
Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 10/114 (8%)
Query: 44 GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103
GV+ + +G PG I D + + N P + + + Q G
Sbjct: 43 GVEYRYWTFDGDVPGRMIRVREGDTVEVEFSN---NPSSTVPHNVDFHAATGQGG-GAAA 98
Query: 104 CPIPPGKNFTYVLQAKDQIGSYFY---FPSFLFHKAAGAFGGIRIWSRPRIPVP 154
PG+ T+ +A Q G Y Y H A G +G I + P+ +P
Sbjct: 99 TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILV--EPKEGLP 149
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 59.9 bits (144), Expect = 8e-11
Identities = 25/155 (16%), Positives = 40/155 (25%), Gaps = 22/155 (14%)
Query: 349 SRTITLANSAPYMNGKQRYAINSVSF-VPADTPLKLADYFKIPGVFTLGSMPTSPNWGNA 407
T+ +A + +N V P+ S P S N
Sbjct: 13 DNTLPVALDLT-GTPLFVWKVNGSDINVDWGKPIIDYILTGNT------SYPVSDNIVQV 65
Query: 408 YLQTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASR--------- 458
+E + H+ G+ F V+G + +
Sbjct: 66 DAVDQWTYWL----IENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVD 121
Query: 459 -TRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492
R N + R TT + W + DN G W
Sbjct: 122 LARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAW 156
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 57.0 bits (137), Expect = 2e-10
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 9/120 (7%)
Query: 31 FTWKITYGD--IYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGL 88
FT I I G + + NG PGP + ND + + + N + +
Sbjct: 34 FTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDTN---TLLHNI 90
Query: 89 QQRRNSWQDGVYGTTCPIPPGKNFTY---VLQAKDQIGSYFYFPSFLFHKAAGAFGGIRI 145
+ G T + PG+ T + + +H +G G I +
Sbjct: 91 DFHAATGALGGGALT-QVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMV 149
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 56.3 bits (135), Expect = 6e-10
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 26/175 (14%)
Query: 158 PAGDF--TVLAGDWYRSNHYVLRRL-----------LDSGHNLPFPDGLLINGRGWNGYT 204
P+ ++ +L D + L S + +L+NG+ W
Sbjct: 3 PSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWPYLE 62
Query: 205 FTVEPGRTYRFRISNVGLTTSINFRIQG-HSMKLVEVEGSH-TLQNTYAALDIHLGQTYS 262
R YRFR+ N T + N + + +G + + + Y
Sbjct: 63 V---EPRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYD 119
Query: 263 VLVTMDQAPQDYYIVVSSRFTPRVL---TTTAILHYSNSRRGVSGPIPGGPTTEI 314
+++ + I+ +S + T I+ + V+ P+ +
Sbjct: 120 IIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFR-----VTKPLAQKDESRK 169
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (134), Expect = 1e-09
Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 18/108 (16%)
Query: 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQD-------GVYGTTCPIPP 108
F GP I A T D + + + N P+ +G+ + + P
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYP 132
Query: 109 GKNFTYVLQAKDQI---------GSYFYFP--SFLFHKAAGAFGGIRI 145
G+ +TY+L A ++ + Y A+G G + I
Sbjct: 133 GEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLII 180
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 51.4 bits (122), Expect = 2e-08
Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 7/100 (7%)
Query: 52 INGQFPGPQIDAVTNDNLIISVYN---YLREPFLISWNGLQQRRNSWQD---GVYGTTCP 105
++ + P ++ + ++ N F I+ G D G +
Sbjct: 54 VHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPV 112
Query: 106 IPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRI 145
GK G+Y+Y H A G FG I +
Sbjct: 113 PKDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVV 152
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.1 bits (119), Expect = 5e-08
Identities = 18/97 (18%), Positives = 27/97 (27%), Gaps = 4/97 (4%)
Query: 52 INGQFPG--PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCPIPP 108
ING+ G + D + + E L + + GVY I P
Sbjct: 51 INGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDIFP 110
Query: 109 GKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRI 145
G T + G + H AG +
Sbjct: 111 GTYQTLEMFP-RTPGIWLLHCHVTDHIHAGMETTYTV 146
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 50.1 bits (119), Expect = 8e-08
Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 7/86 (8%)
Query: 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRN-------SWQDGVYGTTCPIPP 108
GP + A D + + N +P I G++ + + + P
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAP 116
Query: 109 GKNFTYVLQAKDQIGSYFYFPSFLFH 134
G+ +TY + G P L H
Sbjct: 117 GQEYTYEWIISEHSGPTHDDPPCLTH 142
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 49.9 bits (118), Expect = 1e-07
Identities = 30/185 (16%), Positives = 47/185 (25%), Gaps = 25/185 (13%)
Query: 350 RTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYL 409
+ L + IN F+P P+ L + P
Sbjct: 24 INLNLRIG--RNATTADFTINGAPFIPPTVPVLLQILSG-------VTNPNDLLP----- 69
Query: 410 QTSVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVAR 469
+V++ + +EI +H+ G++F VV G YN + V R
Sbjct: 70 GGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSSV-------YNYVNPVRR 120
Query: 470 STTQVYPR-SWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKN 528
+ DN G W + G N P
Sbjct: 121 DVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVF-AEDIPNIPIANAISPAW 179
Query: 529 ALLCG 533
LC
Sbjct: 180 DDLCP 184
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 49.0 bits (116), Expect = 1e-07
Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 11/123 (8%)
Query: 29 RFFTWKITYGDIYPL-GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNG 87
F +I ++ Q + +G PGP + D + +++ N P +
Sbjct: 31 NEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLIN---PPENTMPHN 87
Query: 88 LQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSF-----LFHKAAGAFGG 142
+ + G G I PG+ +A + G++ Y + +H +G G
Sbjct: 88 IDFHAATGALGG-GGLTLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGC 145
Query: 143 IRI 145
I +
Sbjct: 146 IMV 148
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 49.4 bits (117), Expect = 2e-07
Identities = 28/169 (16%), Positives = 42/169 (24%), Gaps = 20/169 (11%)
Query: 366 RYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIV 425
R+ IN ++ P L + + +V
Sbjct: 36 RFTINGTAYESPSVPTLLQIM-----------SGAQSANDLLPAGSVYELPRNQVVELVV 84
Query: 426 FQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPR-SWTAIYM 484
+H+ G++F VV G YN + V R + I
Sbjct: 85 PAGVLGGPHPFHLHGHAFSVVRSAGSST-------YNFVNPVKRDVVSLGVTGDEVTIRF 137
Query: 485 ALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCG 533
DN G W G AN+ P + A LC
Sbjct: 138 VTDNPGPWFFHCHIEFHLMNGLAIVF-AEDMANTVDANNPPVEWAQLCE 185
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 48.7 bits (115), Expect = 3e-07
Identities = 22/145 (15%), Positives = 40/145 (27%), Gaps = 30/145 (20%)
Query: 31 FTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLRE----------- 79
T + ++ + NG FPGP I+ N+N+ + N L
Sbjct: 29 VTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIH 88
Query: 80 -----------PFLISWNGLQQRRNSWQDGVYGTT----CPIPPGKNFTYVLQAKDQIGS 124
++ +G +S + P K Y + +
Sbjct: 89 HSDSQHEEPEVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAI 148
Query: 125 YFYFPSFL----FHKAAGAFGGIRI 145
+Y + + AG G I
Sbjct: 149 LWYHDHAMALTRLNVYAGLVGAYII 173
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (109), Expect = 9e-07
Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 52 INGQFPG--PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPG 109
+NG G P + D+++ +++ E + G T + P
Sbjct: 50 MNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIY--FSGNTYLWRGERRDTANLFPQ 107
Query: 110 KNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRI 145
+ T + D G++ H G +
Sbjct: 108 TSLTLHMW-PDTEGTFNVECLTTDHYTGGMKQKYTV 142
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 47.2 bits (111), Expect = 1e-06
Identities = 24/127 (18%), Positives = 33/127 (25%), Gaps = 13/127 (10%)
Query: 366 RYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIV 425
+ IN+ SF P P+ L L + + E
Sbjct: 36 NFFINNASFTPPTVPVLLQILSGAQTAQDLLPAGSVYPLPA---------HSTIEITLPA 86
Query: 426 FQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMA 485
+H+ G++F VV G RD ST I
Sbjct: 87 TALAPGAPHPFHLHGHAFAVVRSAGSTTYNY--NDPIFRDV--VSTGTPAAGDNVTIRFQ 142
Query: 486 LDNVGMW 492
DN G W
Sbjct: 143 TDNPGPW 149
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.2 bits (109), Expect = 2e-06
Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 22/115 (19%)
Query: 53 NGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNS-----------WQDGVYG 101
+ GP I A D + ++ +N P I G++ +N+ V
Sbjct: 80 HLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPP 139
Query: 102 TTCPIPPGKNFTYVLQAKDQIGS---------YFYFPSFLFHK--AAGAFGGIRI 145
+ + P + FTY ++G Y+ + K G G ++I
Sbjct: 140 SASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKI 194
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.2 bits (101), Expect = 9e-06
Identities = 11/91 (12%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Query: 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQR-RNSWQDGVYGTTCPIPPGKNFTY 114
+ P + + + + + N + + Q + P+ PG T
Sbjct: 49 YNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQHQLGVWPLLPGSFKTL 108
Query: 115 VLQAKDQIGSYFYFPSFLFHKAAGAFGGIRI 145
++ + G + + AG I
Sbjct: 109 EMK-ASKPGWWLLDTEVGEIQRAGMQTPFLI 138
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.5 bits (102), Expect = 1e-05
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 19/105 (18%)
Query: 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYV 115
GPQ+ A D + I N P+ I +G+Q ++ P PG+ TYV
Sbjct: 83 ILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTESSTV--------TPTLPGETLTYV 134
Query: 116 LQAKDQIGS---------YFYFPSFLFHK--AAGAFGGIRIWSRP 149
+ ++ G+ + Y+ + K +G G + + RP
Sbjct: 135 WKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRP 179
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 4e-05
Identities = 14/96 (14%), Positives = 27/96 (28%), Gaps = 5/96 (5%)
Query: 52 INGQFPG--PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPG 109
+NG G P + D + ++ E + + + T + P
Sbjct: 51 VNGYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAF--FHGQALTNKNYRIDTINLFPA 108
Query: 110 KNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRI 145
F + G + L H AG ++
Sbjct: 109 TLFDAYMV-AQNPGEWMLSCQNLNHLKAGLQAFFQV 143
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 36.2 bits (83), Expect = 0.003
Identities = 9/84 (10%), Positives = 15/84 (17%), Gaps = 11/84 (13%)
Query: 420 EFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPAS----------RTRYNLRDTVAR 469
N H+ SF V+ + +
Sbjct: 49 TTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWK 108
Query: 470 STTQVYPRSWTAIYMAL-DNVGMW 492
T Q + I G +
Sbjct: 109 DTIQAHAGEVLRIAATFGPYSGRY 132
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 543 | |||
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 100.0 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 100.0 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 100.0 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.98 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.98 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.98 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.97 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.97 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.96 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.96 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.96 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.96 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.96 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.96 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.95 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.95 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.95 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.92 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.88 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.88 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.85 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.85 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.85 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.84 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.84 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.84 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.83 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.81 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.7 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.69 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.68 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.68 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.68 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.68 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.65 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 99.62 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.6 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 99.56 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.5 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.4 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.3 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.27 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 99.26 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.21 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.21 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.19 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.16 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.16 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.15 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.15 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 99.01 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 99.01 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.99 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.95 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.94 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 98.94 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.87 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 98.82 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.79 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.68 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.57 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 98.55 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.53 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 98.53 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 98.51 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 98.44 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.44 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.41 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.41 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 98.33 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 98.32 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 98.32 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 98.29 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 98.28 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.24 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.24 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 98.19 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 98.14 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 98.11 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 98.1 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 98.1 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 98.08 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 98.05 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 98.02 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 98.01 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 98.01 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 97.95 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 97.95 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 97.94 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 97.89 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.85 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 97.72 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 97.62 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 97.58 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.56 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 97.56 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 97.5 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 97.28 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 97.22 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 97.14 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.13 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 97.11 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 97.1 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 96.65 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 96.49 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 96.45 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 96.19 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 96.18 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 95.94 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 95.94 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 95.91 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 95.79 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 95.71 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 95.69 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 95.69 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 95.62 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 95.46 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 95.45 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 95.17 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 95.15 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 94.17 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 93.01 | |
| d1cyxa_ | 158 | Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 | 86.89 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=2.2e-40 Score=310.09 Aligned_cols=184 Identities=27% Similarity=0.469 Sum_probs=153.8
Q ss_pred cceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCC----------CCCCCCCCccceeEEec
Q 009127 347 KISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMP----------TSPNWGNAYLQTSVMAA 416 (543)
Q Consensus 347 ~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~----------~~p~~~~~~~~~~~~~~ 416 (543)
..++++.+..++...+|..+|+|||++|..|.+|++.+.+.+..+.++.+... ..+.+...+.|+.++.+
T Consensus 4 ~~~~ti~l~~~~~~~ng~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v~~~ 83 (214)
T d1aoza3 4 KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQF 83 (214)
T ss_dssp SCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEE
T ss_pred CCCeEEEEecCccccCCeEEEEECCEeccCCCcchHHHHhhccccccccCCCcccccccccccCCCCCcccccCceeEEe
Confidence 45688887665556778899999999999999999988776655554432111 12233456788999999
Q ss_pred CCCcEEEEEEEeCC------CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcc
Q 009127 417 NFREFVEIVFQNWE------DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVG 490 (543)
Q Consensus 417 ~~g~~v~~~i~N~~------~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG 490 (543)
++|++|||+|+|.+ ...||||||||+||||+++.|.++......+++.+|.||||+.|++++|++|||++||||
T Consensus 84 ~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~adnpG 163 (214)
T d1aoza3 84 KIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPG 163 (214)
T ss_dssp CTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCE
T ss_pred cCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecCCCe
Confidence 99999999999965 346999999999999999999998777778999999999999999999999999999999
Q ss_pred cceeeecchhhhhcccEEEEEEecCCCCCCCcCCCCCcchhcccc
Q 009127 491 MWNIRSENWARQYLGQQFYLRVYSPANSWRDELPIPKNALLCGRA 535 (543)
Q Consensus 491 ~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~ 535 (543)
.|+||||+++|++.|||+.|.|...+ ..++|+++++||.+
T Consensus 164 ~w~~HCH~~~H~~~GM~~~~~v~~~~-----~~~~P~~~~~cg~~ 203 (214)
T d1aoza3 164 VWAFHCHIEPHLHMGMGVVFAEGVEK-----VGRIPTKALACGGT 203 (214)
T ss_dssp EEEEEESSHHHHHTTCEEEEEECGGG-----CCCCCHHHHSSHHH
T ss_pred eEEEEECcHHHHhCcCcEEEEEcccc-----ccCCCccccccccc
Confidence 99999999999999999999886332 46789999999964
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=100.00 E-value=7.4e-40 Score=283.83 Aligned_cols=124 Identities=23% Similarity=0.399 Sum_probs=117.2
Q ss_pred CeEEEEEEEEEEEecCCCe-eEEEEEECCcCCCceEEEecCCEEEEEEEECCC-----CCceeecCcccCCCCCCCCCCC
Q 009127 27 PYRFFTWKITYGDIYPLGV-KQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-----EPFLISWNGLQQRRNSWQDGVY 100 (543)
Q Consensus 27 ~~~~~~l~~~~~~~~~~g~-~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-----~~~~iH~HG~~~~~~~~~DG~p 100 (543)
++++|+|++++..+++||. .+.+++|||++|||+||+++||+|+|+|+|.++ ++++|||||+++..++++||++
T Consensus 1 a~v~~~l~~~~~~~~pdG~~~~~~~~~nG~~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~ 80 (136)
T d1v10a1 1 ATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA 80 (136)
T ss_dssp CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCB
T ss_pred CEEEEEEEEEEEEECCCCcceeEEEEECCCccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCC
Confidence 4689999999999999995 779999999999999999999999999999976 7899999999999999999999
Q ss_pred C-CCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCC
Q 009127 101 G-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPR 150 (543)
Q Consensus 101 ~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (543)
+ +||+|.||++|+|+|++++++||||||||++.|+.+||+|+|||+++++
T Consensus 81 ~~t~~~I~PG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~d 131 (136)
T d1v10a1 81 FVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND 131 (136)
T ss_dssp TTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred ccccceECCCCeEEEEEECCCCccceEEecCchhHHhCCCEEEEEECCCcc
Confidence 8 9999999999999999987799999999999999999999999998754
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=7.5e-38 Score=270.80 Aligned_cols=124 Identities=32% Similarity=0.665 Sum_probs=118.6
Q ss_pred CCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-CC
Q 009127 26 SPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-TT 103 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-tq 103 (543)
+.+|+|+|++++....+||.++.+|+|||++|||+|+|++||+|+|+|+|+|+ +++++||||+++...+++||+++ +|
T Consensus 1 ~~~~~~~~~v~~~~~~pdg~~~~~~~~NG~~PGP~i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~~~~~~~~~~~~~~ 80 (129)
T d1aoza1 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (129)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CcEEEEEEEEEEEEECCCCeEEEEEEECCCcCCCeEEEECCcEEEEEEEeCCCCCCeeeeeccceeeccCcccccccccc
Confidence 46899999999999999999999999999999999999999999999999986 78999999999999999999998 99
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCC
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPR 150 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (543)
++|.||++++|+|++ +++||||||||+..|+.+||+|+|||+++++
T Consensus 81 ~~I~PG~s~~y~f~a-~~~Gt~~YH~H~~~h~~~Gm~G~~iV~~~~~ 126 (129)
T d1aoza1 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQG 126 (129)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTT
T ss_pred ceECCCCEEEEEEEC-CCCCceEEecCCHHHHhCCCEEEEEEcCCCC
Confidence 999999999999999 4799999999999999999999999999875
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=7.5e-38 Score=269.62 Aligned_cols=119 Identities=35% Similarity=0.672 Sum_probs=113.1
Q ss_pred EEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-----CCceeecCcccCCCCCCCCCCCC-CC
Q 009127 30 FFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-----EPFLISWNGLQQRRNSWQDGVYG-TT 103 (543)
Q Consensus 30 ~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-----~~~~iH~HG~~~~~~~~~DG~p~-tq 103 (543)
.++|+|+.+.+++||+++.+++||| +|||+|++++||+|+|+|+|+++ ++++|||||++++..+++||+++ +|
T Consensus 6 ~~tlti~~~~i~pdG~~~~~~~~nG-~pGP~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~g~~~ 84 (131)
T d1hfua1 6 VDTMTLTNANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (131)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETT-BSSCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred cEEEEEEeEEEcCCCeEeeEEEECC-cCCCeEEEECCCEEEEEEEECCCCccccccceEEeCCcccCCCCCCCCCccccc
Confidence 5789999999999999999999999 79999999999999999999987 46899999999999999999998 99
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCC
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRP 149 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 149 (543)
|+|.||++|+|+|++.+++||||||||++.|+.+||+|+|||++++
T Consensus 85 ~~I~PG~~~~y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred ceECCCCeEEEEEeCCCCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 9999999999999977789999999999999999999999999965
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=1.1e-37 Score=268.83 Aligned_cols=119 Identities=26% Similarity=0.545 Sum_probs=114.3
Q ss_pred EEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCC-----CCceeecCcccCCCCCCCCCCCC-CC
Q 009127 30 FFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-----EPFLISWNGLQQRRNSWQDGVYG-TT 103 (543)
Q Consensus 30 ~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-----~~~~iH~HG~~~~~~~~~DG~p~-tq 103 (543)
+++|+++++.+++||..+.+|+|||++|||+|++++||+|+|+|+|.++ +.+++||||+++.+.+++||+++ +|
T Consensus 5 ~~~l~v~~~~i~p~G~~~~~~~~ng~~PGPtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~~~~~~d~~~~~s~ 84 (130)
T d1gyca1 5 AASLVVANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQ 84 (130)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCEEEEEEEECCcccCCeEEEECCeEEEEEEEecCCCcccCCceeEEeccccccccCCCCCcccccc
Confidence 6899999999999999999999999999999999999999999999976 67899999999999999999998 99
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecC
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSR 148 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 148 (543)
|+|.||++++|+|++++++||||||||++.|+.+||+|+|||+++
T Consensus 85 ~~i~PG~s~~Y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~p 129 (130)
T d1gyca1 85 CPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDP 129 (130)
T ss_dssp CCBCTTEEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred CCCCCCCeEEEEEECCCCCceeEEecCCHHHHhCCCEEEEEEeCC
Confidence 999999999999999878999999999999999999999999986
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-34 Score=251.38 Aligned_cols=122 Identities=21% Similarity=0.277 Sum_probs=111.5
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCC
Q 009127 24 GDSPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103 (543)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq 103 (543)
+.+..+.|+|+++++.+..+|....+|+|||++|||+|+|++||+|+|+++|+|+++++|||||+++. +.+||++ +
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~--~ 86 (140)
T d1kv7a1 11 TTDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--Q 86 (140)
T ss_dssp CCCTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT--T
T ss_pred cCCCceEEEEEEEEEEEecCCEEEEEEEECCccCCceEEEECCCEEEEEEEeCccccccEeeeeeecC--CccCCCc--c
Confidence 34456789999999999999999999999999999999999999999999999999999999999764 5699998 7
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCc----hhhhhccceeEEEEecCC
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSF----LFHKAAGAFGGIRIWSRP 149 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~ 149 (543)
++|.||++++|+|++.+++||||||||. +.|+++||+|+|||++++
T Consensus 87 ~~i~pg~~~~y~~~~~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 87 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp CCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred ceEccCCceeEEEEEecCCeeEEEEECCCCChHHHHhCCCeEEEEECCcc
Confidence 8999999999999997568999999995 479999999999999864
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=100.00 E-value=6.6e-34 Score=255.17 Aligned_cols=124 Identities=34% Similarity=0.560 Sum_probs=113.3
Q ss_pred CCeEEEEEEEEEEE--ecCCCe-eEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC
Q 009127 26 SPYRFFTWKITYGD--IYPLGV-KQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG 101 (543)
Q Consensus 26 ~~~~~~~l~~~~~~--~~~~g~-~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~ 101 (543)
..+++|+|++++.. +++||. ++.+|+|||++|||+|++++||+|+|+|+|+++ +.+++||||+++.+.+++||+++
T Consensus 31 g~~~~y~l~~~~~~~~~~pdG~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~~~ 110 (162)
T d2q9oa1 31 GVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANG 110 (162)
T ss_dssp CCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBT
T ss_pred CeEEEEEEEEEEEEeeECCCCCcceeEEEECCcccCCeEEEECCcEEEEEEEecCcccccccccccccccCCCcCCCCcc
Confidence 45799999999866 688985 457999999999999999999999999999986 78899999999999999999998
Q ss_pred -CCCcC-CCCCeEEEEEEeCCCcccceecCCchhhhhccceeEEEEecCCC
Q 009127 102 -TTCPI-PPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWSRPR 150 (543)
Q Consensus 102 -tq~~i-~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 150 (543)
+|++| +||++++|+|.+ +++||||||||++.|+.+||+|+|||+++..
T Consensus 111 ~~~~~i~~pg~~~~y~f~~-~~~Gt~wYH~H~~~q~~~Gl~G~~iV~~p~~ 160 (162)
T d2q9oa1 111 VTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS 160 (162)
T ss_dssp TTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS
T ss_pred cccceecCCCCEEEeeecC-CCCEEEEeecCCHHHHhCCCEEEEEECCCCC
Confidence 99887 569999999999 5899999999999999999999999998764
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=5.6e-34 Score=264.39 Aligned_cols=152 Identities=20% Similarity=0.229 Sum_probs=120.0
Q ss_pred EEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEeCC-CCCCCeeecCCCeE
Q 009127 366 RYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWE-DTVQSYHIDGYSFF 444 (543)
Q Consensus 366 ~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~ 444 (543)
.|+|||++|..+..|.+.+...+.... ...+.+..++.++.|++++|++.|.. .+.||||||||+|+
T Consensus 36 ~wtINg~s~~~~~~p~l~~~~~~~~~~------------~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~ 103 (200)
T d1hfua3 36 RFTINGTAYESPSVPTLLQIMSGAQSA------------NDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFS 103 (200)
T ss_dssp EEEETTBCCCCCSSCHHHHHHTTCCSG------------GGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEE
T ss_pred EEEECCEeccCCCCChhhhhhcCCcCc------------ccccccCceEEecCCcceEEEEeeccccccCceeecCCcEE
Confidence 699999999988899876544321111 01123457889999999999998775 46899999999999
Q ss_pred EEeecCCCCCCCCCCCCCCCCCCcceeEEeCC-CCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCCCCCcC
Q 009127 445 VVGMDGGQWTPASRTRYNLRDTVARSTTQVYP-RSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANSWRDEL 523 (543)
Q Consensus 445 Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~-~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~~~~~~ 523 (543)
||+++++. .+++.+|.||||+.|++ |+|++|||++||||.|+|||||++|++.|||++|.+..++. ....
T Consensus 104 vl~~~g~~-------~~~~~~~~~rDtv~v~~~G~~~~ir~~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~--~~~~ 174 (200)
T d1hfua3 104 VVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANT--VDAN 174 (200)
T ss_dssp EEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHH--HHHC
T ss_pred EEeccCCC-------CCccccCcccceEEeCCCCEEEEEEEECCCCeeeEEEeCCChHHhCCCcEEEEEcCCCc--cccc
Confidence 99997653 24677899999999975 56999999999999999999999999999999998765442 1234
Q ss_pred CCCCc-chhccccCCC
Q 009127 524 PIPKN-ALLCGRARGR 538 (543)
Q Consensus 524 ~~p~~-~~~c~~~~~~ 538 (543)
.+|++ .+.|+.|.++
T Consensus 175 ~~p~~~~~~C~~~~~~ 190 (200)
T d1hfua3 175 NPPVEWAQLCEIYDDL 190 (200)
T ss_dssp CCCHHHHHHHHHHHTC
T ss_pred CCChhhhccccccccc
Confidence 56666 4689998775
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.98 E-value=5.1e-33 Score=257.89 Aligned_cols=155 Identities=21% Similarity=0.267 Sum_probs=121.3
Q ss_pred EEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEEeCC---CCCCCeeecCC
Q 009127 365 QRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQNWE---DTVQSYHIDGY 441 (543)
Q Consensus 365 ~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~N~~---~~~HP~HlHG~ 441 (543)
.+|+|||++|..+..|.+++........ ...+.+..++.++.++++++++.|.. ...||||||||
T Consensus 35 ~~~~iNg~sf~~p~~p~l~~~~~~~~~~------------~~~~~~~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~ 102 (199)
T d1gyca3 35 TNFFINNASFTPPTVPVLLQILSGAQTA------------QDLLPAGSVYPLPAHSTIEITLPATALAPGAPHPFHLHGH 102 (199)
T ss_dssp SCEEETTBCCCCCSSCHHHHHHTTCCST------------TTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred ceEEECCEecCCCCcchHHHHhcCCCCc------------ccccccCceEEeccCceeEEEeecccccCCCceeeeecCC
Confidence 3699999999998888876543221111 12234567788999999999999764 45799999999
Q ss_pred CeEEEeecCCCCCCCCCCCCCCCCCCcceeEEe---CCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEecCCCC
Q 009127 442 SFFVVGMDGGQWTPASRTRYNLRDTVARSTTQV---YPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPANS 518 (543)
Q Consensus 442 ~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~v---p~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~~~ 518 (543)
+|+||+++++.. +++.+|.+|||+.+ ++++|++|||++||||.|+|||||++|++.|||++|.+...+
T Consensus 103 ~F~vv~~~~~~~-------~~~~~p~~rdt~~~~~~~~g~~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~-- 173 (199)
T d1gyca3 103 AFAVVRSAGSTT-------YNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDVAD-- 173 (199)
T ss_dssp CEEEEECTTCCC-------CCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEETHHH--
T ss_pred cEEEEeecCCCc-------cCccCcccccceeeeccCCCcEEEEEEECCCCeeEEEEcCchhhHhccCcEEEEEcCCc--
Confidence 999999976532 46678999999887 789999999999999999999999999999999999554332
Q ss_pred CCCcCCCCCcch-hccccCCCCC
Q 009127 519 WRDELPIPKNAL-LCGRARGRHT 540 (543)
Q Consensus 519 ~~~~~~~p~~~~-~c~~~~~~~~ 540 (543)
.....++|+++. .|+.|-..+.
T Consensus 174 ~~~~~~~p~~~~~~C~~~~~~~~ 196 (199)
T d1gyca3 174 VKAANPVPKAWSDLCPIYDGLSE 196 (199)
T ss_dssp HHHHCCCCHHHHHHHHHHHTCCG
T ss_pred ccccCCCCHHHHhhhhhhcccCc
Confidence 223456788876 7999866654
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.98 E-value=5.9e-33 Score=256.70 Aligned_cols=166 Identities=17% Similarity=0.212 Sum_probs=121.9
Q ss_pred cceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEE
Q 009127 347 KISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVF 426 (543)
Q Consensus 347 ~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i 426 (543)
.+++++.+.... .++...|+|||++|.++..|++...+.+..... ....+..++.+..++++++++
T Consensus 21 ~~d~~~~~~~~~--~~~~~~~~iNg~~f~~~~~p~l~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~i~~ 86 (190)
T d1v10a3 21 GADINLNLRIGR--NATTADFTINGAPFIPPTVPVLLQILSGVTNPN------------DLLPGGAVISLPANQVIEISI 86 (190)
T ss_dssp CSSEEEECCEEC--CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGG------------GSSSTTTEEEECTTCEEEEEE
T ss_pred CCCEEEEEEEEe--cCCEeEEEECCEecCCCCCchHHHhhcCCcccc------------cccccceeEEccCccEEEEEe
Confidence 355666554422 233457999999999889998866543221111 011234567788899999888
Q ss_pred EeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCC-EEEEEEEecCcccceeeecchhhhhcc
Q 009127 427 QNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRS-WTAIYMALDNVGMWNIRSENWARQYLG 505 (543)
Q Consensus 427 ~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g-~v~irf~adnpG~w~~HCHil~Hed~G 505 (543)
.|. +.||||||||+|+||+++++. .+++.+|.||||+.|+++| +++|||++||||.|+|||||++|++.|
T Consensus 87 ~~~--~~HP~HlHG~~F~Vl~~~~~~-------~~~~~~~~~rDTv~v~~~g~~~~irf~adnpG~w~~HCHi~~H~~~G 157 (190)
T d1v10a3 87 PGG--GNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAG 157 (190)
T ss_dssp ECC--BSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTT
T ss_pred ccC--ccccccccCceEEEEEcCCCc-------ccccccCcccCEEEeCCCeEEEEEEEEcCCCeeEEEecCchhhhhCC
Confidence 774 789999999999999987543 2466789999999999876 888999999999999999999999999
Q ss_pred cEEEEEEecCCCCCCCcCCCCCc-chhccccCC
Q 009127 506 QQFYLRVYSPANSWRDELPIPKN-ALLCGRARG 537 (543)
Q Consensus 506 Mm~~~~V~~p~~~~~~~~~~p~~-~~~c~~~~~ 537 (543)
||++|.+..++-. ...++|+. ...|..+..
T Consensus 158 M~~~~~~~~~~~~--~~~~~~~~~~~~c~~~~~ 188 (190)
T d1v10a3 158 LAVVFAEDIPNIP--IANAISPAWDDLCPKYNA 188 (190)
T ss_dssp CEEEEEESGGGHH--HHSCCCHHHHTHHHHHTT
T ss_pred CcEEEEECCCCCC--ccCCCCHHHHhhhhhccC
Confidence 9999988655421 12344544 457987653
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.98 E-value=1.2e-32 Score=244.98 Aligned_cols=132 Identities=11% Similarity=-0.010 Sum_probs=102.6
Q ss_pred ceEEEEEeccCCCcCCeEEEEEcCeeecCCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCCCcEEEEEEE
Q 009127 348 ISRTITLANSAPYMNGKQRYAINSVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANFREFVEIVFQ 427 (543)
Q Consensus 348 ~~~~~~~~~~~~~~~g~~~~~iNg~~f~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v~~~i~ 427 (543)
..|++.+.... ...|+..|.|||++|.+| .. ..++.|++++|.|.
T Consensus 12 ~~r~~~l~~~~-~~~g~~~~~ing~~~~~~---~~-------------------------------~~~~~G~~e~W~i~ 56 (154)
T d1gska3 12 NIRTLKLAGTQ-DEYGRPVLLLNNKRWHDP---VT-------------------------------ETPKVGTTEIWSII 56 (154)
T ss_dssp EEEEEEEEEEE-CTTSCEEEEETTBCTTSC---CC-------------------------------BCCBTTCEEEEEEE
T ss_pred eEEEEEEcccc-cccCCceEEECCcCcCCC---cc-------------------------------cccCCCCEEEEEEE
Confidence 34555554432 234566799999988532 10 13578999999999
Q ss_pred eCCCCCCCeeecCCCeEEEeecCCCCCC----------CCCCCCCCCCCCcceeEEeCCCCEEEEEEE-ecCcccceeee
Q 009127 428 NWEDTVQSYHIDGYSFFVVGMDGGQWTP----------ASRTRYNLRDTVARSTTQVYPRSWTAIYMA-LDNVGMWNIRS 496 (543)
Q Consensus 428 N~~~~~HP~HlHG~~F~Vl~~~~g~~~~----------~~~~~~~~~~p~~rDTv~vp~~g~v~irf~-adnpG~w~~HC 496 (543)
|.+.+.|||||||++||||+++.+.+.. .........++.||||+.|+++++++|||+ +||||.|+|||
T Consensus 57 N~~~~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG~w~~HC 136 (154)
T d1gska3 57 NPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHC 136 (154)
T ss_dssp ECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEE
T ss_pred eCCCCCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCCCEEEEEEEeCCCCcceEEec
Confidence 9999999999999999999987643211 001122345578999999999999999998 69999999999
Q ss_pred cchhhhhcccEEEEEEec
Q 009127 497 ENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 497 Hil~Hed~GMm~~~~V~~ 514 (543)
||++|||.|||+.|+|++
T Consensus 137 Hil~Hed~GMM~~~~V~e 154 (154)
T d1gska3 137 HILEHEDYDMMRPMDITD 154 (154)
T ss_dssp SCHHHHTTTCEEEEEEBC
T ss_pred CcchHhhCcCceEEEEeC
Confidence 999999999999999974
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.97 E-value=1.2e-31 Score=239.22 Aligned_cols=120 Identities=20% Similarity=0.302 Sum_probs=101.5
Q ss_pred CCeEEEEEEEEEEEecCC--CeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-C
Q 009127 26 SPYRFFTWKITYGDIYPL--GVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-T 102 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~--g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-t 102 (543)
..+++|+|++++..+..+ |+...+|+|||++|||+|||++||+|+|+|+|.++ ++||||++..+. ++++.+ +
T Consensus 30 ~~~~~~~lt~~~~~~~~~~~g~~~~~~t~NG~~PGPtI~v~~Gd~v~v~~~N~~~---~~h~h~ih~hg~--~~~~~g~~ 104 (159)
T d1oe2a1 30 PKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVEFHGA--TGALGGAK 104 (159)
T ss_dssp CCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTS--CSGGGGGG
T ss_pred CeEEEEEEEEEEEEEEECCCCcEEEEEEECCcCCCCeEEEECCcEEEEEEECCCc---cccccceeeccc--cCCCCCcc
Confidence 357899999999988665 88999999999999999999999999999999985 345555544332 456666 7
Q ss_pred CCcCCCCCeEEEEEEeCCCcccceecCCc----hhhhhccceeEEEEecCCCC
Q 009127 103 TCPIPPGKNFTYVLQAKDQIGSYFYFPSF----LFHKAAGAFGGIRIWSRPRI 151 (543)
Q Consensus 103 q~~i~PG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~ 151 (543)
+++|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..
T Consensus 105 ~~~I~PG~t~ty~f~a-~~~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p~e~~ 156 (159)
T d1oe2a1 105 LTNVNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGL 156 (159)
T ss_dssp GCCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCC
T ss_pred cccCCCCCeEEEEEEc-CCCceEEEEeCCCCCchhHHhCCCEEEEEEECCCCC
Confidence 8899999999999999 489999999994 57999999999999987753
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.97 E-value=4.5e-31 Score=235.16 Aligned_cols=119 Identities=20% Similarity=0.306 Sum_probs=104.1
Q ss_pred CCeEEEEEEEEEEEec--CCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-C
Q 009127 26 SPYRFFTWKITYGDIY--PLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-T 102 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~~--~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-t 102 (543)
+.+++|+|++.+..+. .+|++..+|+|||++|||+|||++||+|+|+|+|. ..++||||+++++. +|+.++ .
T Consensus 29 ~~~~~~~l~~~~~~~~i~~~G~~~~~~~~NG~~PGP~I~v~~GD~V~i~l~N~---~~~~~~Hg~~~h~~--~~~~~~~~ 103 (157)
T d2bw4a1 29 PRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINP---DTNTLLHNIDFHAA--TGALGGGA 103 (157)
T ss_dssp CCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTS--CSGGGGGG
T ss_pred CeEEEEEEEEEEEEEEECCCCeEEEEEEECCccCCceEEEECCcEEEEEEEeC---CCCcceEeeeeccc--CCCcCCcc
Confidence 4568999999988864 67999999999999999999999999999999996 56789999987754 555555 6
Q ss_pred CCcCCCCCeEEEEEEeCCCcccceecCC----chhhhhccceeEEEEecCCC
Q 009127 103 TCPIPPGKNFTYVLQAKDQIGSYFYFPS----FLFHKAAGAFGGIRIWSRPR 150 (543)
Q Consensus 103 q~~i~PG~~~~y~f~~~~~~Gt~wYH~H----~~~q~~~Gl~G~liV~~~~~ 150 (543)
.++|.||++++|+|++ +++|||||||| ...|+.+||+|+|||++++.
T Consensus 104 ~~~i~PGet~ty~f~a-~~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~p~e~ 154 (157)
T d2bw4a1 104 LTQVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDG 154 (157)
T ss_dssp GCCBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBC
T ss_pred eeeECcCCEEeEEEEC-CCCccceEEECCCCchHHHHhCCCEEEEEEeCCCC
Confidence 6789999999999999 58999999999 45799999999999998764
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=1.6e-31 Score=250.91 Aligned_cols=158 Identities=15% Similarity=0.170 Sum_probs=113.3
Q ss_pred eEEEEEcCeeec-CCCCchhhhcccCCCcccccCCCCCCCCCCCCccceeEEecCC-CcEEEEEEEeC----CCCCCCee
Q 009127 364 KQRYAINSVSFV-PADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMAANF-REFVEIVFQNW----EDTVQSYH 437 (543)
Q Consensus 364 ~~~~~iNg~~f~-~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-g~~v~~~i~N~----~~~~HP~H 437 (543)
...|.|||++|. +++.|++.....+.. ..+ ...+++.+.. +.+..+++++. ..+.||||
T Consensus 27 ~~~w~iNg~s~~~d~~~P~L~~~~~~~~---------~~~------~~~~~~~~~~~~~~~~~~i~~~~~n~~~~~HP~H 91 (216)
T d2q9oa3 27 LFVWKVNGSDINVDWGKPIIDYILTGNT---------SYP------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMH 91 (216)
T ss_dssp SCEEEETTBCCCCCTTSCHHHHHHHTCC---------CCC------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEE
T ss_pred EEEEEECCEecccCCCCCChhhhhcCCc---------ccc------cccceeeccccccceeEEEEeccCCcccccccee
Confidence 467999999985 678888765432110 001 1123344443 45555555543 34679999
Q ss_pred ecCCCeEEEeecCCCCCCCC----------CCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccceeeecchhhhhcccE
Q 009127 438 IDGYSFFVVGMDGGQWTPAS----------RTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQ 507 (543)
Q Consensus 438 lHG~~F~Vl~~~~g~~~~~~----------~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm 507 (543)
||||+||||+++.+.+.... ...+++.+|.||||+.|+++||++|||++||||.|+|||||++|++.|||
T Consensus 92 lHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~ir~~adnpG~Wl~HCHi~~H~~~GM~ 171 (216)
T d2q9oa3 92 LHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLS 171 (216)
T ss_dssp ESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCE
T ss_pred ecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCCEEEEEEECCCCeEEEEEccCCcccccCCe
Confidence 99999999999988765432 13468899999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCCC-cCCCCC-cchhccccCC
Q 009127 508 FYLRVYSPANSWRD-ELPIPK-NALLCGRARG 537 (543)
Q Consensus 508 ~~~~V~~p~~~~~~-~~~~p~-~~~~c~~~~~ 537 (543)
++| |+.|++..+. ...+|+ .++.|+.|+.
T Consensus 172 ~~~-~~~p~~~~~~~~~~~~~~~~~~C~~w~~ 202 (216)
T d2q9oa3 172 VDF-LERPADLRQRISQEDEDDFNRVCDEWRA 202 (216)
T ss_dssp EEE-EECHHHHGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEE-EEcchhhhhcccCCCchhhhccChhhcc
Confidence 999 5555432111 112343 3579998754
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.96 E-value=6.3e-30 Score=226.85 Aligned_cols=120 Identities=18% Similarity=0.226 Sum_probs=99.3
Q ss_pred CCCeEEEEEEEEEEEecC-CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCC
Q 009127 25 DSPYRFFTWKITYGDIYP-LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103 (543)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq 103 (543)
...+++|+|++++..+.. +|....+|+|||++|||+|+|++||+|+|+|+|.+. .+..|+||++ +....||.. ..
T Consensus 27 ~~~~~~~~l~~~~~~~~~~~g~~~~~~t~NG~~PGPti~v~~Gd~v~i~~~N~~~-~~~~H~~~~h--~~~~~~~~~-~~ 102 (153)
T d1mzya1 27 GPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPE-NTMPHNIDFH--AATGALGGG-GL 102 (153)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECTT-CCSCBCCEET--TSCSGGGGG-GG
T ss_pred CCeEEEEEEEEEEEEEEeCCCcEEEEEEECCCcCCCcEEEeCCCEEEEEEEcCCC-CceEccCccc--cCCcCCCCC-cc
Confidence 334789999999999974 688899999999999999999999999999999854 3445555553 333444443 34
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCc-----hhhhhccceeEEEEecCC
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSF-----LFHKAAGAFGGIRIWSRP 149 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~-----~~q~~~Gl~G~liV~~~~ 149 (543)
.+|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++
T Consensus 103 ~~i~PG~t~ty~f~a-~~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 103 TLINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp CCBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred ccccCCCEEEEEEEc-CCCceEEEEeCCcccccHhHHhCCCEEEEEEecCC
Confidence 689999999999999 589999999994 368999999999999875
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.96 E-value=3.8e-29 Score=226.84 Aligned_cols=141 Identities=24% Similarity=0.369 Sum_probs=121.2
Q ss_pred CCCce-EEEeeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCC-------CcceEEEecCCEEEEEEEEcCCcceEEEE
Q 009127 158 PAGDF-TVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW-------NGYTFTVEPGRTYRFRISNVGLTTSINFR 229 (543)
Q Consensus 158 ~~~e~-~l~~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~-------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~ 229 (543)
||.|. +|+|+||+|+...++......+ ..+.+|++|||||+. ....++|++|++|||||||+|+.+.+.|+
T Consensus 1 YD~D~~vi~lsDW~h~~~~~~~~~~~~~-~~p~~d~~LINGkg~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~ 79 (181)
T d2q9oa2 1 YDIDLGVFPITDYYYRAADDLVHFTQNN-APPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVS 79 (181)
T ss_dssp CSEEEEEEEEEEECSSCHHHHHHHHTTS-CCCCBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEE
T ss_pred CCccCeeEEEEecCCCCHHHHHhhcccC-CCCCcceEEECCcCCCCCCCCCcceEEEECCCCEEEEEEecccCCccEEEE
Confidence 36677 8999999999887765554433 356789999999964 35689999999999999999999999999
Q ss_pred EeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccC-----CCccceEEEEEecCCC
Q 009127 230 IQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFT-----PRVLTTTAILHYSNSR 299 (543)
Q Consensus 230 i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~-----~~~~~~~~il~y~~~~ 299 (543)
|+||+|+|||+||.+++|+.++++.|+|||||||+|++++++|+|||++..... .......|||+|.++.
T Consensus 80 id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~~~~~Y~ir~~~~~~~~~~~~~~~~~~ail~Y~ga~ 154 (181)
T d2q9oa2 80 LVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP 154 (181)
T ss_dssp ETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSC
T ss_pred ECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCCCCccEEEEEeccccccccCCCCCceEEEEEECCCC
Confidence 999999999999999999999999999999999999999999999999876321 1235788999998865
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.96 E-value=2.8e-29 Score=225.12 Aligned_cols=139 Identities=32% Similarity=0.500 Sum_probs=117.7
Q ss_pred CCceEEEeeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCC--------CcceEEEecCCEEEEEEEEcCCcceEEEEE
Q 009127 159 AGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW--------NGYTFTVEPGRTYRFRISNVGLTTSINFRI 230 (543)
Q Consensus 159 ~~e~~l~~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~--------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i 230 (543)
|.|++|+|+||+++....+.. ..+...+.+++++|||++. ..+.++|++|++|||||||+|+.+.+.|+|
T Consensus 5 d~e~vi~lsDW~h~~~~~l~~--~~~~~~~~pd~~liNGkg~~~~~~~~~~~~~~~v~~g~~~rlRlina~~~~~~~~~i 82 (168)
T d1v10a2 5 DASTVITIADWYHSLSTVLFP--NPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSI 82 (168)
T ss_dssp SGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEE
T ss_pred CCccEEEEEECCCCCHHHHHh--ccCCCCCCCceeeecCCCCcCCCCcCCCceEEEECCCCEEEEEEEecccCceEEEEE
Confidence 578999999999987666532 2345567899999999975 356899999999999999999999999999
Q ss_pred eCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCC---ccceEEEEEecCCC
Q 009127 231 QGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPR---VLTTTAILHYSNSR 299 (543)
Q Consensus 231 ~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~~il~y~~~~ 299 (543)
+||+|+|||.||.+++|+.++++.|+|||||||+|++++++|+||||+....... .....|+|+|.|+.
T Consensus 83 d~H~~~Via~DG~~v~P~~~d~i~i~~GqR~dvlv~~~~~~~~y~ira~~~~~~~~~~~~~~~aiL~Y~g~~ 154 (168)
T d1v10a2 83 DGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAA 154 (168)
T ss_dssp TTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCC
T ss_pred CCCeEEEEEeCCeecCceEEeEEEEccCceEEEEEECCCCCCcEEEEEEeccCCCcCCCCceEEEEEECCCC
Confidence 9999999999999999999999999999999999999988999999998654332 34568999998864
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.96 E-value=2.8e-29 Score=222.63 Aligned_cols=122 Identities=19% Similarity=0.190 Sum_probs=102.1
Q ss_pred CCCeEEEEEEEEEEEec-CCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCC
Q 009127 25 DSPYRFFTWKITYGDIY-PLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTT 103 (543)
Q Consensus 25 ~~~~~~~~l~~~~~~~~-~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq 103 (543)
.+.+..++|++.+..+. .+|.++.+|+|||++|||+|+|++||+|+|+|+|++ .++||||+++.+....||.. .+
T Consensus 23 ~~~~~~~~l~~~~~~~~~~~G~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~~---~~~~~H~~~~h~~~~~~~~~-~~ 98 (151)
T d1kbva1 23 YPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNP---SSTVPHNVDFHAATGQGGGA-AA 98 (151)
T ss_dssp SCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECT---TCSSCBCCEETTCCSGGGGT-TT
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEcCC---CCceeeeccccccccCCCCc-ce
Confidence 34567889999888875 479999999999999999999999999999999974 45677777766655555432 56
Q ss_pred CcCCCCCeEEEEEEeCCCcccceecCCc---hhhhhccceeEEEEecCCCC
Q 009127 104 CPIPPGKNFTYVLQAKDQIGSYFYFPSF---LFHKAAGAFGGIRIWSRPRI 151 (543)
Q Consensus 104 ~~i~PG~~~~y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~ 151 (543)
+.|.||++++|+|++ +++||||||||. ..|+.+||+|+|||++++..
T Consensus 99 ~~i~PG~t~~y~f~a-~~~Gt~~YH~H~~~~~~h~~~Gm~G~liV~p~~~~ 148 (151)
T d1kbva1 99 TFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL 148 (151)
T ss_dssp TCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC
T ss_pred eeeCCCCEEEEEEeC-CCCeEEEEECCCCChHHHHhCCCEEEEEEECCCCC
Confidence 789999999999999 589999999994 46999999999999987653
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=1.2e-29 Score=232.10 Aligned_cols=125 Identities=18% Similarity=0.154 Sum_probs=106.0
Q ss_pred cCCCeEEEEEEEEEEEe--cCCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCC----------------------
Q 009127 24 GDSPYRFFTWKITYGDI--YPLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLRE---------------------- 79 (543)
Q Consensus 24 ~~~~~~~~~l~~~~~~~--~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~---------------------- 79 (543)
.....+.|+|++++... .+++..+.+|+|||++|||+|+|++||+|+|+++|+|++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ynG~~PGPtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~ 99 (181)
T d1gska1 20 QSKEKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEV 99 (181)
T ss_dssp ECSSCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSC
T ss_pred cCCCceEEEEEEEEeEEEecCCCcceeEEEECCccCCCeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCC
Confidence 34467889999998875 468888999999999999999999999999999999853
Q ss_pred CceeecCcccCCCCCCCCCCCC---CC---CcCCCCCeEEEEEEeCCCcccceecCCc----hhhhhccceeEEEEecCC
Q 009127 80 PFLISWNGLQQRRNSWQDGVYG---TT---CPIPPGKNFTYVLQAKDQIGSYFYFPSF----LFHKAAGAFGGIRIWSRP 149 (543)
Q Consensus 80 ~~~iH~HG~~~~~~~~~DG~p~---tq---~~i~PG~~~~y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~ 149 (543)
.+++||||+++. +.+||.+. ++ +++.+|++++|+|.+.+++||||||||. +.|+++||+|+|||++++
T Consensus 100 ~t~iH~HG~~~~--~~~DG~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~ 177 (181)
T d1gska1 100 KTVVHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPK 177 (181)
T ss_dssp CBCEEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGG
T ss_pred cceeeeeccccC--CccCCCcccccccCcccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCcc
Confidence 589999999764 57899873 44 4556678889999997668999999995 479999999999999865
Q ss_pred C
Q 009127 150 R 150 (543)
Q Consensus 150 ~ 150 (543)
+
T Consensus 178 ~ 178 (181)
T d1gska1 178 E 178 (181)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.96 E-value=1.1e-28 Score=222.24 Aligned_cols=139 Identities=27% Similarity=0.486 Sum_probs=119.2
Q ss_pred CCCCCCCceEEEeeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCC-------CcceEEEecCCEEEEEEEEcCCcceE
Q 009127 154 PFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW-------NGYTFTVEPGRTYRFRISNVGLTTSI 226 (543)
Q Consensus 154 ~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~-------~~p~~~v~~G~~~rlRiiN~~~~~~~ 226 (543)
.|+.+|+|++|+|+||+++...++. ..+.++..+|||++. ..+.++|++|++|||||||+|+.+.+
T Consensus 5 ~YD~dD~e~vl~l~DW~h~~~~~~~-------~~~~pd~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~ 77 (172)
T d1hfua2 5 LYDEDDENTIITLADWYHIPAPSIQ-------GAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNW 77 (172)
T ss_dssp GCSBCSTTSEEEEEEECSSCGGGCC----------CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCE
T ss_pred cCCCCCCeEEEEEEECCCCChHHhh-------ccCCCCcEEECccCccCCCCCCCceEEEECCCCEEEEEEeeecCCceE
Confidence 4556688999999999998765432 234689999999975 46789999999999999999999999
Q ss_pred EEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCC-------ccceEEEEEecCCC
Q 009127 227 NFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPR-------VLTTTAILHYSNSR 299 (543)
Q Consensus 227 ~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~-------~~~~~~il~y~~~~ 299 (543)
.|+|+||+|+|||+||.+++|+.+++|.|++||||||+|++++++|+|||++....... .....|+|+|.++.
T Consensus 78 ~~~i~~H~~~via~DG~~v~P~~~~~l~i~~gqR~dvlv~~~~~~~~Y~ira~~~~~~~~~~~~~~~~~~~aiL~Y~g~~ 157 (172)
T d1hfua2 78 QFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAA 157 (172)
T ss_dssp EEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSC
T ss_pred EEEeCCCeEEEEEeCCEEcccEEeceEeccCCeEEEEEEEcCCCCCcEEEEEEeccCcccccCcCCCceEEEEEEECCCC
Confidence 99999999999999999999999999999999999999999988899999987653321 24678999999865
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.95 E-value=1.3e-27 Score=224.68 Aligned_cols=144 Identities=31% Similarity=0.525 Sum_probs=123.0
Q ss_pred CCCCceEEEeeeeeeccHHHHHHHhccC--CCCCCCCeEEEcCCCC------------------------CcceEEEecC
Q 009127 157 PPAGDFTVLAGDWYRSNHYVLRRLLDSG--HNLPFPDGLLINGRGW------------------------NGYTFTVEPG 210 (543)
Q Consensus 157 ~~~~e~~l~~~d~~~~~~~~~~~~~~~g--~~~~~~~~~liNG~~~------------------------~~p~~~v~~G 210 (543)
.||+|++|+|+||+|....++...+..+ ...+.++.++|||+.. ..+.++|++|
T Consensus 3 ~yD~e~~l~l~DWyh~~~~~~~~~~~~~~~~~~~~~d~~ling~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 82 (209)
T d1aoza2 3 HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPK 82 (209)
T ss_dssp CCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTT
T ss_pred CCCceEEEEEEeCCCCCHHHHHHHHhcCCCCCCCCCCeeEEcCCCCcCCCcccccccccccccccCCCCCCceEEEEcCC
Confidence 4699999999999999877765554432 3345789999999864 3468999999
Q ss_pred CEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCC-cceEEEEeeccCC-Cccc
Q 009127 211 RTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAP-QDYYIVVSSRFTP-RVLT 288 (543)
Q Consensus 211 ~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~-g~y~i~~~~~~~~-~~~~ 288 (543)
++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|+|||||||+|++++.+ +.||+++...... +...
T Consensus 83 ~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~~~~~~~~~~~ 162 (209)
T d1aoza2 83 KTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPP 162 (209)
T ss_dssp CEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCC
T ss_pred CEEEEEEEecCCceeEEEEeCCCcEEEEecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEeccccCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999998765 4799998775443 4567
Q ss_pred eEEEEEecCCCC
Q 009127 289 TTAILHYSNSRR 300 (543)
Q Consensus 289 ~~~il~y~~~~~ 300 (543)
..++++|.++..
T Consensus 163 ~~ail~y~~~~~ 174 (209)
T d1aoza2 163 GLTLLNYLPNSV 174 (209)
T ss_dssp EEEEEEETTSCT
T ss_pred eeEEEEeCCCCc
Confidence 899999988764
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.95 E-value=1.1e-27 Score=215.06 Aligned_cols=135 Identities=25% Similarity=0.441 Sum_probs=115.6
Q ss_pred CCceEEEeeeeeeccHHHHHHHhccCCCCCCCCeEEEcCCCC-------CcceEEEecCCEEEEEEEEcCCcceEEEEEe
Q 009127 159 AGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGW-------NGYTFTVEPGRTYRFRISNVGLTTSINFRIQ 231 (543)
Q Consensus 159 ~~e~~l~~~d~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~-------~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~ 231 (543)
++|.+|+|+||+|+.... .+.....++..+|||++. ..+.++|++|++|||||||+|+.+.+.|+|+
T Consensus 11 ~ee~vi~lsDWyh~~~~~------~~~~~~~~d~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlRlIN~~~~~~~~~~id 84 (170)
T d1gyca2 11 NESTVITLTDWYHTAARL------GPRFPLGADATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSID 84 (170)
T ss_dssp SGGGEEEEEEECSSCTTT------SCSSCSSCSEEEETTBCCBTTCTTSCCCEEEECTTCEEEEEEEECCSSCCEEEEET
T ss_pred CCceEEEEeecCCChhhh------cccCCCcCCcccccCccccCCCCCCCceEEEECCCCEEEEEEeecCCCceeeEEeC
Confidence 366899999999975321 223345678999999975 4578999999999999999999999999999
Q ss_pred CCeeEEEEEcCccccccccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCC---ccceEEEEEecCCC
Q 009127 232 GHSMKLVEVEGSHTLQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPR---VLTTTAILHYSNSR 299 (543)
Q Consensus 232 g~~~~via~DG~~~~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~---~~~~~~il~y~~~~ 299 (543)
||+|+|||+||.+++|+.+++|.|++||||||+|++++.+|+|||++....... .....|+|+|.++.
T Consensus 85 ~h~~~via~DG~~v~P~~~d~l~i~~gqRydvlv~~~~~~~~y~ira~~~~~~~~~~~~~~~aiL~Y~~a~ 155 (170)
T d1gyca2 85 GHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGNYWIRANPNFGTVGFAGGINSAILRYQGAP 155 (170)
T ss_dssp TCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSC
T ss_pred CCeEEEEEeCCeeccceEeeEEEecCCeEEEEEEeCCCCCCcEEEEEeccccccccCCCeeEEEEEECCCC
Confidence 999999999999999999999999999999999999988999999998754332 34568999998764
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=2.2e-28 Score=221.52 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=77.5
Q ss_pred EecCCCcEEEEEEEeCCC-CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCE-EEEEEEec--Cc
Q 009127 414 MAANFREFVEIVFQNWED-TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSW-TAIYMALD--NV 489 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~-v~irf~ad--np 489 (543)
+.++.|++|+|+|.|.++ +.|||||||++|+|+++++++.. ..++.|||||.|+++++ ++|+|+++ ++
T Consensus 87 ~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~--------~~~~~~kDTv~v~~~~~~v~v~f~~~~~~~ 158 (181)
T d1kv7a3 87 FAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVEGNVSEVLVKFNHDAPKE 158 (181)
T ss_dssp EECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEESSSEEEEEECCCSCCCGG
T ss_pred eEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCcc--------ccCCcceeEEEeCCCceEEEEEEEeeCCCC
Confidence 567899999999999875 58999999999999999775432 23468999999998754 56788765 56
Q ss_pred ccceeeecchhhhhcccEEEEEE
Q 009127 490 GMWNIRSENWARQYLGQQFYLRV 512 (543)
Q Consensus 490 G~w~~HCHil~Hed~GMm~~~~V 512 (543)
|.|+||||||+|||.|||..|+|
T Consensus 159 G~w~fHCHil~H~d~GMm~~f~V 181 (181)
T d1kv7a3 159 HAYMAHCHLLEHEDTGMMLGFTV 181 (181)
T ss_dssp GCEEEEESSHHHHHTTCEEEEEC
T ss_pred CeEEEeCChHHHHhCCCCEEEEC
Confidence 99999999999999999999986
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=4.4e-25 Score=199.65 Aligned_cols=125 Identities=18% Similarity=0.219 Sum_probs=97.6
Q ss_pred CCeEEEEEEEEEEEe--cCCCe------------eEEEEEECCc------------CCCceEEEecCCEEEEEEEECCCC
Q 009127 26 SPYRFFTWKITYGDI--YPLGV------------KQQGILINGQ------------FPGPQIDAVTNDNLIISVYNYLRE 79 (543)
Q Consensus 26 ~~~~~~~l~~~~~~~--~~~g~------------~~~~~~~Ng~------------~pgP~i~v~~Gd~v~i~~~N~l~~ 79 (543)
+++|+|.+-+.+..+ +|.+. +.....|+++ +|||+|||++||+|+|+|+|.+++
T Consensus 1 ~~~r~y~iaa~e~~WdY~P~~~~~~~~~~g~~ykK~~y~eyd~tf~~~~~~~~~~g~~GP~Ira~~GD~i~V~f~N~~~~ 80 (180)
T d1sdda1 1 AKLRQFYVAAQSIRWNYRPESTHLSSKPFETSFKKIVYREYEAYFQKEKPQSRTSGLLGPTLYAEVGDIMKVHFKNKAHK 80 (180)
T ss_dssp CCCCEECCEEEEEEEC--------------CCEEEEEEECCCTTTCCCCCCCSSCCSCCCCEEEETTCEEEEEEEECSSS
T ss_pred CceEEEEEEEEEEeeccCCCcccccCccCCceEEEEEEEEeccceeeccCCCcccCCcCCeEEEECCcEEeeEEEeCCCC
Confidence 356788888888775 34331 2233456665 699999999999999999999999
Q ss_pred CceeecCcccCCC----CCCCCCCCC-C--CCcCCCCCeEEEEEEeCCC---------cccceecCCch--hhhhcccee
Q 009127 80 PFLISWNGLQQRR----NSWQDGVYG-T--TCPIPPGKNFTYVLQAKDQ---------IGSYFYFPSFL--FHKAAGAFG 141 (543)
Q Consensus 80 ~~~iH~HG~~~~~----~~~~DG~p~-t--q~~i~PG~~~~y~f~~~~~---------~Gt~wYH~H~~--~q~~~Gl~G 141 (543)
+++|||||+.+.. ....||++. + +++|+||++|+|+|.++++ +||||||||.. .|+.+||+|
T Consensus 81 ~~siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~PGet~tY~w~v~~~~gp~~~d~~~gt~~YHshv~~~~~~~~GL~G 160 (180)
T d1sdda1 81 PLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIG 160 (180)
T ss_dssp CBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCE
T ss_pred CccccccccccccccccccccccCCCCCccccccCCCCEEEEEEEeCCcccCccCCCCCEEEEEecCCCcHHHhhCCceE
Confidence 9999999997643 345677764 3 3589999999999999643 47999999965 589999999
Q ss_pred EEEEecCCC
Q 009127 142 GIRIWSRPR 150 (543)
Q Consensus 142 ~liV~~~~~ 150 (543)
+|||+++..
T Consensus 161 ~lIV~~~g~ 169 (180)
T d1sdda1 161 PLLICKKGT 169 (180)
T ss_dssp EEEEECTTC
T ss_pred EEEEccCCC
Confidence 999999764
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.1e-23 Score=194.35 Aligned_cols=96 Identities=20% Similarity=0.319 Sum_probs=79.0
Q ss_pred cCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCC----CCC------CCCCCC-CCCcCCCCCeEEEEEEeCCCcc
Q 009127 55 QFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRR----NSW------QDGVYG-TTCPIPPGKNFTYVLQAKDQIG 123 (543)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~----~~~------~DG~p~-tq~~i~PG~~~~y~f~~~~~~G 123 (543)
.++||+||+++||+|+|+|+|.++++++|||||+.+.. .+. .+|... ++|+|.||++|+|+|+++++.|
T Consensus 82 G~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~dg~~~~~~~~~~~~~~~~~~~~V~PGet~tY~w~v~~~~g 161 (207)
T d2j5wa3 82 GILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVG 161 (207)
T ss_dssp TTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCSBCCBCC-------CCCCSSCBCTTCEEEEEEECCGGGS
T ss_pred CCcCceEEEECCCEEEEEEEECCCCCccccccccccCcccccccccCCCCcccCCcCcccceecCCCEEEEEEEecCCCC
Confidence 37899999999999999999999999999999997532 111 223333 6799999999999999976555
Q ss_pred ---------cceecCCch--hhhhccceeEEEEecCCC
Q 009127 124 ---------SYFYFPSFL--FHKAAGAFGGIRIWSRPR 150 (543)
Q Consensus 124 ---------t~wYH~H~~--~q~~~Gl~G~liV~~~~~ 150 (543)
|||||||.. .|+.+||+|+|||+.+..
T Consensus 162 P~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g~ 199 (207)
T d2j5wa3 162 PTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGS 199 (207)
T ss_dssp CCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTC
T ss_pred CccCCCCceeEEEccCCChhHhhccCceEEEEEccCCC
Confidence 999999975 577999999999998764
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=2.5e-22 Score=184.05 Aligned_cols=95 Identities=23% Similarity=0.406 Sum_probs=81.8
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCC----CCCCCCCCC---CCCcCCCCCeEEEEEEeCC--------
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRR----NSWQDGVYG---TTCPIPPGKNFTYVLQAKD-------- 120 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~----~~~~DG~p~---tq~~i~PG~~~~y~f~~~~-------- 120 (543)
+|||+|+|++||+|+|+|+|.++.+++|||||+++.. ....||+.. .+++|+||++++|+|++++
T Consensus 73 ~lGP~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~dg~~~~~~~~~~v~PG~t~tY~~~~~~~~~p~~~d 152 (192)
T d2j5wa1 73 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGD 152 (192)
T ss_dssp TSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTS
T ss_pred CcCCeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCCCCCCCCcccCcccCCCEEEEEEEccCccccccCC
Confidence 7999999999999999999999999999999998753 334566552 5688999999999999964
Q ss_pred -CcccceecCCch--hhhhccceeEEEEecCCC
Q 009127 121 -QIGSYFYFPSFL--FHKAAGAFGGIRIWSRPR 150 (543)
Q Consensus 121 -~~Gt~wYH~H~~--~q~~~Gl~G~liV~~~~~ 150 (543)
++||||||||.. .|+.+||+|+|||++++.
T Consensus 153 ~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g~ 185 (192)
T d2j5wa1 153 GNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 185 (192)
T ss_dssp CSEEEEEEECCSSHHHHHHHTCEEEEEEECTTC
T ss_pred CCCceEEEeCCCCcHHHHhCCCeEEEEEccCCC
Confidence 257999999965 589999999999999764
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=1.9e-23 Score=184.74 Aligned_cols=85 Identities=13% Similarity=0.234 Sum_probs=75.8
Q ss_pred EecCCCcEEEEEEEeCCC--CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 414 MAANFREFVEIVFQNWED--TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
+.++.|++|+|.|.|.+. +.||||+||+.|++...+ +.+|||+.|+|+++++++|++|+||.
T Consensus 62 l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~~~~g----------------~~~~dtv~i~pg~~~~~~~~a~~pG~ 125 (149)
T d2j5wa5 62 LTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTPGI 125 (149)
T ss_dssp CEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSCEE
T ss_pred eEEEcCCcEEEEEEecCCCCCccceEEEeeEeeeeccC----------------CCCcceEEECCCceEEEEEeCCCCee
Confidence 346789999999999764 579999999999985432 45899999999999999999999999
Q ss_pred ceeeecchhhhhcccEEEEEEec
Q 009127 492 WNIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~~ 514 (543)
|+||||+++|++.|||+.|.|.+
T Consensus 126 w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 126 WLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp EEEEECCHHHHHTTCEEEEEEEC
T ss_pred EEEEcCCHHHHhccCceEEEEec
Confidence 99999999999999999999974
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2e-22 Score=179.92 Aligned_cols=86 Identities=26% Similarity=0.437 Sum_probs=74.9
Q ss_pred cCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcc---------cc
Q 009127 55 QFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIG---------SY 125 (543)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~G---------t~ 125 (543)
.++||+||+++||+|+|+|+|.++++++|||||+.... .+| ++|.||++++|+|+++++.| ||
T Consensus 82 g~lGP~IraevGD~i~V~f~N~a~~p~SiH~HGv~~~~--~~~------~~v~PGet~tY~w~v~~~~gp~~~d~~c~t~ 153 (179)
T d2j5wa4 82 GILGPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTES--STV------TPTLPGETLTYVWKIPERSGAGTEDSACIPW 153 (179)
T ss_dssp TTSCCCEEEETTEEEEEEEEECSSSCBCCEESSCBCSC--SCC------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEE
T ss_pred CccCCeEEEECCCEEEEEEEeCCCCCEeEeeccccCCC--CCC------CcccCCccEEEEEEecCccCCccCCCCceeE
Confidence 36799999999999999999999999999999997542 233 66899999999999975455 99
Q ss_pred eecCCch--hhhhccceeEEEEecC
Q 009127 126 FYFPSFL--FHKAAGAFGGIRIWSR 148 (543)
Q Consensus 126 wYH~H~~--~q~~~Gl~G~liV~~~ 148 (543)
|||||.. .|+.+||+|+|||+.+
T Consensus 154 ~YHShv~~~~d~~sGL~GplIVc~k 178 (179)
T d2j5wa4 154 AYYSTVDQVKDLYSGLIGPLIVCRR 178 (179)
T ss_dssp EEECCTTHHHHHHTTCEEEEEEECC
T ss_pred EEecCCCcHHHhhCCCeEEEEEEeC
Confidence 9999976 5788999999999975
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=3e-22 Score=175.99 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=72.9
Q ss_pred EecCCCcEEEEEEEeCCC--CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 414 MAANFREFVEIVFQNWED--TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
+.++.|++|+|.|.|.+. ..||||+||+.|++. ..++||+.|+|+++++++|++|+||.
T Consensus 61 l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~~-------------------~~~~dt~~i~pg~~~t~~~~a~~pG~ 121 (145)
T d2j5wa2 61 LTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWR-------------------GERRDTANLFPQTSLTLHMWPDTEGT 121 (145)
T ss_dssp CEEETTCCEEEEEECCCSTTCCEEEEETTCCEEET-------------------TEEESEEEECTTCEEEEEECCCSCEE
T ss_pred eEEEcCCeEEEEEEecCCCCcccceEecccEEEec-------------------ccCccceEECCCCEEEEEEEcCCCEe
Confidence 356789999999999654 469999999999873 23689999999999999999999999
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|+||||+++|++.|||+.|+|.
T Consensus 122 w~~HCH~~~H~~~GM~~~~~V~ 143 (145)
T d2j5wa2 122 FNVECLTTDHYTGGMKQKYTVN 143 (145)
T ss_dssp EEEEECSHHHHHTTCEEEEEEE
T ss_pred EEEEcCCHHHHhCCCeEEEEEe
Confidence 9999999999999999999996
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=1.4e-21 Score=176.19 Aligned_cols=121 Identities=20% Similarity=0.255 Sum_probs=98.0
Q ss_pred CCCCceEEEeeeeeeccHHHHHHH-h----------ccCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcce
Q 009127 157 PPAGDFTVLAGDWYRSNHYVLRRL-L----------DSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTS 225 (543)
Q Consensus 157 ~~~~e~~l~~~d~~~~~~~~~~~~-~----------~~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~ 225 (543)
..++|++|+|+||+++.+.++... . ........++.++|||+. .|.+++++ ++|||||||+|+.+.
T Consensus 4 ~gd~Diplvl~D~~~~~dg~l~~~~~~~~~~~~~~~~~~~~g~~Gd~~lvNG~~--~p~~~v~~-~~~RlRliNa~~~~~ 80 (174)
T d1gska2 4 SDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKV--WPYLEVEP-RKYRFRVINASNTRT 80 (174)
T ss_dssp CGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEE--SCEEECCS-SEEEEEEEECCSSCC
T ss_pred CCCCCEEEEeEecccCCCCCEEeeccccCCCcCCcccccccCccCCeEEecCcc--ceEEEecC-ceEEEEEEecccCce
Confidence 357899999999998765443100 0 001123456899999999 89999975 579999999999999
Q ss_pred EEEEEe-CCeeEEEEEcCccc-cccccCeEEEcCCCeEEEEEEeCCCCcceEEEEee
Q 009127 226 INFRIQ-GHSMKLVEVEGSHT-LQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSS 280 (543)
Q Consensus 226 ~~~~i~-g~~~~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~ 280 (543)
+.|++. ||+|+|||+||+++ +|+.++++.|+|||||||+|++++.+|.+++..+.
T Consensus 81 ~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~ 137 (174)
T d1gska2 81 YNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANS 137 (174)
T ss_dssp EEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEEC
T ss_pred eeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEECCCCCCceEEEEcc
Confidence 999995 78999999999998 69999999999999999999999777777665543
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=1.1e-21 Score=175.22 Aligned_cols=116 Identities=20% Similarity=0.208 Sum_probs=93.2
Q ss_pred CCceEEEeeeeeeccHHHHHH--HhccCCCCCCCCeEEEcCCCCCcceEEEecCCEEEEEEEEcCCcceEEEEE-eCCee
Q 009127 159 AGDFTVLAGDWYRSNHYVLRR--LLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRI-QGHSM 235 (543)
Q Consensus 159 ~~e~~l~~~d~~~~~~~~~~~--~~~~g~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i-~g~~~ 235 (543)
.+|++|+|+||+++.+.++.. ..........++.++|||+. .|.+.++ |++|||||||+|+.+.+.|++ +||+|
T Consensus 8 ~ddiplvi~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~--~p~~~~~-~~~~RlR~iNa~~~~~~~~~~~~g~~~ 84 (165)
T d1kv7a2 8 IDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI--YPQHAAP-RGWLRLRLLNGCNARSLNFATSDNRPL 84 (165)
T ss_dssp TTEEEEEEEEECBCTTSSBCCCCCHHHHHHCCCCSEEEETTBS--SCEEEEE-EEEEEEEEEECCSSCCEEEEETTCCCE
T ss_pred CCcEeEEeEcccCCCCCCCccCCCCcccCCCccCCEEEEcCcc--cceEecc-CcEEEEEEEEcccCceeeEEecCCCeE
Confidence 568999999998876543210 00000112357899999999 8999986 679999999999999999987 69999
Q ss_pred EEEEEcCccc-cccccCeEEEcCCCeEEEEEEeCCCCcceEEEE
Q 009127 236 KLVEVEGSHT-LQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVV 278 (543)
Q Consensus 236 ~via~DG~~~-~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~ 278 (543)
+||+.||+++ +|+.++++.|+|||||||+|++++ .+.+.+..
T Consensus 85 ~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~~~~ 127 (165)
T d1kv7a2 85 YVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVT 127 (165)
T ss_dssp EEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEE
T ss_pred EEEEeCCccccCceEeCeEEECCCCEEEEEEECCC-CCcEEEEE
Confidence 9999999998 799999999999999999999985 45555544
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.84 E-value=1.1e-21 Score=171.18 Aligned_cols=83 Identities=18% Similarity=0.251 Sum_probs=73.5
Q ss_pred ecCCCcEEEEEEEeCCC--CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 415 AANFREFVEIVFQNWED--TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 415 ~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++.|+.|+|.|.|.+. ..||||+||+.|++.+.+ +.++||+.|+||++.+++|++++||.|
T Consensus 55 ~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~~~~~----------------~~~~dt~~i~pg~~~t~~~~~~~pG~w 118 (139)
T d1sddb2 55 RMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWW 118 (139)
T ss_dssp EEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEE
T ss_pred ccccCCcEEEEEEecCCCCCcccEEEcceEEEeccCC----------------CCcCCeEEECCCCEEEEEEecCCCEeE
Confidence 35579999999999753 469999999999885432 357899999999999999999999999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
+||||+++|++.|||+.|.|.
T Consensus 119 ~~HcH~~~H~~~GM~~~~~V~ 139 (139)
T d1sddb2 119 LLDTEVGEIQRAGMQTPFLIV 139 (139)
T ss_dssp EEECCCHHHHTTTCEEEEEEE
T ss_pred EEEeCCHHHHhccCcEEEEEC
Confidence 999999999999999999884
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.84 E-value=2e-21 Score=171.41 Aligned_cols=93 Identities=22% Similarity=0.199 Sum_probs=79.7
Q ss_pred EecCCCcEEEEEEEeCC-CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 414 MAANFREFVEIVFQNWE-DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
+.++.|++++|.|.|.. ..+||||+||++|+++...++.+. ..++||+.|+|+++++++|++++||.|
T Consensus 53 l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~v~~~G~~~~-----------~~~~~T~~v~pg~~~~~~f~a~~PG~y 121 (151)
T d1kbva2 53 LKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLI-----------NENVQSTIVPAGGSAIVEFKVDIPGNY 121 (151)
T ss_dssp EEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCE-----------ECSBSEEEECTTEEEEEEEEECSCEEE
T ss_pred eEEEeCCeEEEEEEcCCccccccceeecceeeEEecCCCcCC-----------cccceeEecccCceeEEeeecCCCceE
Confidence 56789999999999954 568999999999999977654321 236799999999999999999999999
Q ss_pred eeeecch-hhhhcccEEEEEEecCCC
Q 009127 493 NIRSENW-ARQYLGQQFYLRVYSPAN 517 (543)
Q Consensus 493 ~~HCHil-~Hed~GMm~~~~V~~p~~ 517 (543)
+||||.+ +|+++|||+.|.|..++.
T Consensus 122 ~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 122 TLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp EEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred EEECCcHHHHHhccCeEEEEEcCCCC
Confidence 9999986 457999999999987763
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.84 E-value=2.7e-21 Score=171.86 Aligned_cols=104 Identities=16% Similarity=0.104 Sum_probs=86.2
Q ss_pred CCCeeEEEEEECCcCCCceEEEecCCEEEEEEEECC---CCCceeecCcccCCCC--CCCCCCCC-CCCcCCCCCeEEEE
Q 009127 42 PLGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYL---REPFLISWNGLQQRRN--SWQDGVYG-TTCPIPPGKNFTYV 115 (543)
Q Consensus 42 ~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l---~~~~~iH~HG~~~~~~--~~~DG~p~-tq~~i~PG~~~~y~ 115 (543)
..|.....+.+||+ |||+|+|++||+|+|+|+|.. +.+..||+||...... ...++.+. .++.+.||++++|.
T Consensus 44 ~~g~~~~~~~~~~~-~~Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~pg~~~~~~ 122 (153)
T d1e30a_ 44 LPGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTN 122 (153)
T ss_dssp CTTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCBTTEEEEEE
T ss_pred ccccccceeecCCC-cCCeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccccccCCCccceeeecCCCEEEEE
Confidence 35788888999997 799999999999999999974 3566788888655321 12233333 67899999999999
Q ss_pred EEeCCCcccceecCCchhhhhccceeEEEEe
Q 009127 116 LQAKDQIGSYFYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 116 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (543)
|++++++||||||||...|+.+||+|.|||+
T Consensus 123 f~~~~~pGty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 123 FTWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EEECCCSEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred EEeCCCCeEEEEeCCchhHHHCCCEEEEEEC
Confidence 9987789999999999999999999999996
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.83 E-value=8.5e-23 Score=172.28 Aligned_cols=77 Identities=17% Similarity=0.144 Sum_probs=55.0
Q ss_pred EecCCCcEEEEEEEeCC--CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 414 MAANFREFVEIVFQNWE--DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
++++.|++|+|.|.|.+ ...||||+||+.|++. +.++||+.|+|+++.+++|++|+||.
T Consensus 37 ~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~~-------------------~~~~dtv~i~pg~~~~v~~~a~~pG~ 97 (116)
T d1sdda2 37 ITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQN-------------------HHKISAITLVSATSTTANMTVSPEGR 97 (116)
T ss_dssp CCCCCC------BBCCCSSSCEECCBCSSTTCEET-------------------TEECSCCCEETTCCBC--------CC
T ss_pred eEEeCCCEEEEEEeccccCCCceeEEEeccccccC-------------------CcccceEeecccEEEEEEEEcCCCeE
Confidence 34678999999999965 4569999999999872 24789999999999999999999999
Q ss_pred ceeeecchhhhhcccEEE
Q 009127 492 WNIRSENWARQYLGQQFY 509 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~ 509 (543)
|+||||+++|++.|||+.
T Consensus 98 w~~HCH~~~H~~~GM~a~ 115 (116)
T d1sdda2 98 WTIASLIPRHFQAGMQAY 115 (116)
T ss_dssp CCCBCCSTTTGGGTCBCC
T ss_pred EEEEcCCHHHHHccceec
Confidence 999999999999999975
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=1.9e-20 Score=164.86 Aligned_cols=81 Identities=17% Similarity=0.289 Sum_probs=72.8
Q ss_pred EecCCCcEEEEEEEeCCC--CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 414 MAANFREFVEIVFQNWED--TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
+.++.|++++|.|.|.+. ..||||+||+.|++ ++.++||+.|+|+++.+++|++++||.
T Consensus 62 l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~-------------------~~~~~dt~~i~pg~~~~v~f~~~~pG~ 122 (146)
T d1kcwa2 62 LSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN-------------------KNYRIDTINLFPATLFDAYMVAQNPGE 122 (146)
T ss_dssp CEEETTEEEEEEEECCCSTTCCEEEEETTSCCCC-------------------SSSCCSEEEECTTCEEEEEEEECSCEE
T ss_pred ceEecCCeEEEEEEEcCCCCcccceEeeeeeeec-------------------cCCCcceEEecCCCEEEEEEEcCCCee
Confidence 456789999999999754 56999999998852 246899999999999999999999999
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|+||||+++|++.|||+.|+|.
T Consensus 123 w~~HCH~~~H~~~GM~~~~~V~ 144 (146)
T d1kcwa2 123 WMLSCQNLNHLKAGLQAFFQVQ 144 (146)
T ss_dssp EEEEECCHHHHHTCCEEEEEEE
T ss_pred EEEEcCCHHHHhcCCeEEEEEE
Confidence 9999999999999999999996
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.70 E-value=2e-17 Score=146.07 Aligned_cols=94 Identities=18% Similarity=0.099 Sum_probs=77.4
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcc--eeEEeCCCCEEEEEEEecCc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVAR--STTQVYPRSWTAIYMALDNV 489 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~r--DTv~vp~~g~v~irf~adnp 489 (543)
+.++++.|++|.++..|. ...|+||+||++|.+|..++. + .+++.+ +|+.|++++.+++.|++++|
T Consensus 66 ~~l~akvGErV~i~~~~~-n~~s~fHliG~hFD~V~~~G~-~----------~~~p~~~~qTv~VppG~a~~ve~~f~~P 133 (173)
T d2bw4a2 66 HALTAAVGERVLVVHSQA-NRDTRPHLIGGHGDYVWATGK-F----------RNPPDLDQETWLIPGGTAGAAFYTFRQP 133 (173)
T ss_dssp GCEEEETTCEEEEEEEES-SSCBCEEEETCCEEEEETTCC-T----------TSCCEEEESCCCBCTTEEEEEEEECCSC
T ss_pred cCcccccCCeEEEEecCC-CCCccceeccceeEEECCCCc-c----------cCCCcCCceeEEccCCccEEEEEEecCc
Confidence 346789999997655444 678999999999999987643 2 234444 49999999999999999999
Q ss_pred ccceeeecc-hhhhhcccEEEEEEecCCC
Q 009127 490 GMWNIRSEN-WARQYLGQQFYLRVYSPAN 517 (543)
Q Consensus 490 G~w~~HCHi-l~Hed~GMm~~~~V~~p~~ 517 (543)
|.|+||||. .+|++.|||+.|+|+.+.+
T Consensus 134 G~y~~v~H~l~ea~~~G~~g~l~V~G~~~ 162 (173)
T d2bw4a2 134 GVYAYVNHNLIEAFELGAAGHFKVTGEWN 162 (173)
T ss_dssp EEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred eEEEEEechHHHHHhCCCEEEEEEcCCCC
Confidence 999999996 5799999999999987654
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.69 E-value=2.8e-17 Score=142.80 Aligned_cols=96 Identities=17% Similarity=0.145 Sum_probs=83.2
Q ss_pred EEEEEECCcC-CCceEEEecCCEEEEEEEECC--CCCceeecCcccCCCCCCCCCCCC-CCCcCCCCCeEEEEEEeCCCc
Q 009127 47 QQGILINGQF-PGPQIDAVTNDNLIISVYNYL--REPFLISWNGLQQRRNSWQDGVYG-TTCPIPPGKNFTYVLQAKDQI 122 (543)
Q Consensus 47 ~~~~~~Ng~~-pgP~i~v~~Gd~v~i~~~N~l--~~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~PG~~~~y~f~~~~~~ 122 (543)
..++++||.. +.|.|++++||+|+++|.|.. ...+++||||..... ..+|... .+++|.||++++|+|++ +++
T Consensus 39 ~~~~tiNG~~~~~p~~~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~--~~~~~~~~dt~~i~pg~~~t~~~~~-~~p 115 (139)
T d1sddb2 39 HEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLE--NGTQQHQLGVWPLLPGSFKTLEMKA-SKP 115 (139)
T ss_dssp CEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEE--CSSSCEEESSEEECTTEEEEEEEEC-CSS
T ss_pred cccceeCcEecCCCccccccCCcEEEEEEecCCCCCcccEEEcceEEEe--ccCCCCcCCeEEECCCCEEEEEEec-CCC
Confidence 4689999975 889999999999999999974 456899999986543 3455554 67899999999999999 579
Q ss_pred ccceecCCchhhhhccceeEEEE
Q 009127 123 GSYFYFPSFLFHKAAGAFGGIRI 145 (543)
Q Consensus 123 Gt~wYH~H~~~q~~~Gl~G~liV 145 (543)
|+||||||...|...||.|.++|
T Consensus 116 G~w~~HcH~~~H~~~GM~~~~~V 138 (139)
T d1sddb2 116 GWWLLDTEVGEIQRAGMQTPFLI 138 (139)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEE
T ss_pred EeEEEEeCCHHHHhccCcEEEEE
Confidence 99999999999999999999997
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=3.3e-17 Score=143.85 Aligned_cols=95 Identities=16% Similarity=0.145 Sum_probs=81.9
Q ss_pred EEEEECCcCCC--ceEEEecCCEEEEEEEECC--CCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcc
Q 009127 48 QGILINGQFPG--PQIDAVTNDNLIISVYNYL--REPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIG 123 (543)
Q Consensus 48 ~~~~~Ng~~pg--P~i~v~~Gd~v~i~~~N~l--~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~G 123 (543)
.++++||..+| |.|++++||+|+++|.|.. ...+++|+||...... +.....++|.||++++|+|++ +++|
T Consensus 47 ~~~tiNG~~~~~~p~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~~----~~~~dt~~i~pg~~~~v~f~~-~~pG 121 (146)
T d1kcwa2 47 RMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTNK----NYRIDTINLFPATLFDAYMVA-QNPG 121 (146)
T ss_dssp EEEESSSCCSSCCCCCEEETTEEEEEEEECCCSTTCCEEEEETTSCCCCS----SSCCSEEEECTTCEEEEEEEE-CSCE
T ss_pred ceEEECCccCCCCCcceEecCCeEEEEEEEcCCCCcccceEeeeeeeecc----CCCcceEEecCCCEEEEEEEc-CCCe
Confidence 57899999999 9999999999999999975 4568999999865422 222245789999999999999 5799
Q ss_pred cceecCCchhhhhccceeEEEEec
Q 009127 124 SYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 124 t~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
+||||||...++..||.|.++|++
T Consensus 122 ~w~~HCH~~~H~~~GM~~~~~V~~ 145 (146)
T d1kcwa2 122 EWMLSCQNLNHLKAGLQAFFQVQE 145 (146)
T ss_dssp EEEEEECCHHHHHTCCEEEEEEEC
T ss_pred eEEEEcCCHHHHhcCCeEEEEEEe
Confidence 999999999999999999999974
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.68 E-value=2.1e-17 Score=145.33 Aligned_cols=101 Identities=14% Similarity=0.140 Sum_probs=83.1
Q ss_pred EEEEECCcCCCce----EEEecCCEEEEEEEECC-CCCceeecCcccCCCCCCCCCCC----C-CCCcCCCCCeEEEEEE
Q 009127 48 QGILINGQFPGPQ----IDAVTNDNLIISVYNYL-REPFLISWNGLQQRRNSWQDGVY----G-TTCPIPPGKNFTYVLQ 117 (543)
Q Consensus 48 ~~~~~Ng~~pgP~----i~v~~Gd~v~i~~~N~l-~~~~~iH~HG~~~~~~~~~DG~p----~-tq~~i~PG~~~~y~f~ 117 (543)
..++|||+.++++ |++++||+|+|++.|.. ...+++|+||.+.... +.||.+ . ..+.|+||++.+++|+
T Consensus 36 ~~~~fNG~~~~~t~~~~l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~v-~~~G~~~~~~~~~T~~v~pg~~~~~~f~ 114 (151)
T d1kbva2 36 EYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKV-YVEGGKLINENVQSTIVPAGGSAIVEFK 114 (151)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEE-EGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred cEEEECCccCCccCccceEEEeCCeEEEEEEcCCccccccceeecceeeEE-ecCCCcCCcccceeEecccCceeEEeee
Confidence 4589999987765 99999999999999965 5689999999976432 456654 2 3467999999999999
Q ss_pred eCCCcccceecCCch-hhhhccceeEEEEecCCC
Q 009127 118 AKDQIGSYFYFPSFL-FHKAAGAFGGIRIWSRPR 150 (543)
Q Consensus 118 ~~~~~Gt~wYH~H~~-~q~~~Gl~G~liV~~~~~ 150 (543)
++ ++|+||||||.- .+...||.|.|+|+++.+
T Consensus 115 a~-~PG~y~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 115 VD-IPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp EC-SCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred cC-CCceEEEECCcHHHHHhccCeEEEEEcCCCC
Confidence 95 799999999964 445779999999998753
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=3.1e-17 Score=144.31 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=86.2
Q ss_pred EEEEECCcCCC--ceEEEecCCEEEEEEEECCC--CCceeecCcccCCCCCCCCCCCC-CCCcCCCCCeEEEEEEeCCCc
Q 009127 48 QGILINGQFPG--PQIDAVTNDNLIISVYNYLR--EPFLISWNGLQQRRNSWQDGVYG-TTCPIPPGKNFTYVLQAKDQI 122 (543)
Q Consensus 48 ~~~~~Ng~~pg--P~i~v~~Gd~v~i~~~N~l~--~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~PG~~~~y~f~~~~~~ 122 (543)
.++++||..+| |.|++++||+|+++|.|... ..+++|+||..... ..+|.+. ..+.|.||++.+|+|++ +.+
T Consensus 47 ~~~~iNG~~~~~~~~l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~--~~~g~~~~dtv~i~pg~~~~~~~~a-~~p 123 (149)
T d2j5wa5 47 KMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQY--KHRGVYSSDVFDIFPGTYQTLEMFP-RTP 123 (149)
T ss_dssp EEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEE--TTTTCEEESEEEECTTCEEEEEECC-CSC
T ss_pred cceEECCCcCCCCCCeEEEcCCcEEEEEEecCCCCCccceEEEeeEeee--eccCCCCcceEEECCCceEEEEEeC-CCC
Confidence 78999999998 88999999999999999754 57999999976543 4677766 66889999999999999 589
Q ss_pred ccceecCCchhhhhccceeEEEEec
Q 009127 123 GSYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 123 Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
|+||||||...|...||.|.++|.+
T Consensus 124 G~w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 124 GIWLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp EEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred eeEEEEcCCHHHHhccCceEEEEec
Confidence 9999999999999999999999975
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=2.1e-17 Score=144.71 Aligned_cols=95 Identities=16% Similarity=0.136 Sum_probs=82.1
Q ss_pred EEEEECCcCCC--ceEEEecCCEEEEEEEECC--CCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcc
Q 009127 48 QGILINGQFPG--PQIDAVTNDNLIISVYNYL--REPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIG 123 (543)
Q Consensus 48 ~~~~~Ng~~pg--P~i~v~~Gd~v~i~~~N~l--~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~G 123 (543)
.++++||+.+| |.|++++||+|++++.|.. +..+++|+||..... ++....++.|.||++.+|+|++ +.+|
T Consensus 46 ~~~tiNG~~~~~~p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~----~~~~~dt~~i~pg~~~t~~~~a-~~pG 120 (145)
T d2j5wa2 46 KMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLW----RGERRDTANLFPQTSLTLHMWP-DTEG 120 (145)
T ss_dssp EEEEETTBCTTCCCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEE----TTEEESEEEECTTCEEEEEECC-CSCE
T ss_pred ceEEECCccCCCCCCeEEEcCCeEEEEEEecCCCCcccceEecccEEEe----cccCccceEECCCCEEEEEEEc-CCCE
Confidence 68999999999 9999999999999999964 456899999986532 2222245789999999999999 5899
Q ss_pred cceecCCchhhhhccceeEEEEec
Q 009127 124 SYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 124 t~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
+||||||...++..||.|.++|+.
T Consensus 121 ~w~~HCH~~~H~~~GM~~~~~V~~ 144 (145)
T d2j5wa2 121 TFNVECLTTDHYTGGMKQKYTVNQ 144 (145)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEEC
T ss_pred eEEEEcCCHHHHhCCCeEEEEEec
Confidence 999999999999999999999973
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.65 E-value=2e-16 Score=139.29 Aligned_cols=94 Identities=18% Similarity=0.108 Sum_probs=78.7
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcce--eEEeCCCCEEEEEEEecCcc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARS--TTQVYPRSWTAIYMALDNVG 490 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rD--Tv~vp~~g~v~irf~adnpG 490 (543)
.++++.|++|.|+. +.....|+|||||++|..|-.++ .+ .+++.|| |+.|++++.+++.|++++||
T Consensus 67 ~l~akvGe~Vri~~-~~~N~~ssfHlIG~hfD~V~~~G-~~----------~n~p~~~~qT~~V~pG~~~~v~~tf~~PG 134 (177)
T d1oe1a2 67 ALTAKVGETVLLIH-SQANRDTRPHLIGGHGDWVWETG-KF----------ANPPQRDLETWFIRGGSAGAALYTFKQPG 134 (177)
T ss_dssp CEEEETTCEEEEEE-EESSSCBCEEETTCCEEEEETTC-CT----------TSCCEEEESBCCBCTTEEEEEEEECCSCE
T ss_pred CcccccCCeEEEEe-cCCCCCccceecccccceEccCC-ee----------CCCCCcCceeEEecCCccEEEEEEecCce
Confidence 36788999998854 55578999999999999987654 22 3456676 99999999999999999999
Q ss_pred cceeeecch-hhhhcccEEEEEEecCCCC
Q 009127 491 MWNIRSENW-ARQYLGQQFYLRVYSPANS 518 (543)
Q Consensus 491 ~w~~HCHil-~Hed~GMm~~~~V~~p~~~ 518 (543)
.|+||||.+ +|++.|||+.|+|+.+.++
T Consensus 135 ~Y~fV~H~L~ea~~~Ga~g~l~V~G~~~p 163 (177)
T d1oe1a2 135 VYAYLNHNLIEAFELGAAGHIKVEGKWND 163 (177)
T ss_dssp EEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred EEEEEecHHHHHHhcCCeEEEEecCCCCc
Confidence 999999965 6899999999999876543
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.62 E-value=5.6e-16 Score=132.41 Aligned_cols=96 Identities=15% Similarity=0.113 Sum_probs=80.6
Q ss_pred CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCc
Q 009127 43 LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQI 122 (543)
Q Consensus 43 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~ 122 (543)
++....++++++++++|+|+|++||+|+|+|+|.......+|+|++...+ + +..+.||++.+|+|++ +++
T Consensus 36 ~~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~ltN~d~~~~v~H~~~i~~~~------~---~~~~~PG~~~~~~F~a-~~~ 105 (132)
T d1fwxa1 36 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYG------V---AMEIGPQMTSSVTFVA-ANP 105 (132)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT------E---EEEECTTCEEEEEEEC-CSC
T ss_pred CceEEEEEeecCcccCCEEEEcCCCEEEEEEEcCCCCccceEeechhhhc------c---ccccCCCEEEEEEEeC-CCC
Confidence 45677889999999999999999999999999998888889999984432 1 2568899999999999 589
Q ss_pred ccceecCCch-hhhhccceeEEEEecC
Q 009127 123 GSYFYFPSFL-FHKAAGAFGGIRIWSR 148 (543)
Q Consensus 123 Gt~wYH~H~~-~q~~~Gl~G~liV~~~ 148 (543)
||||||||.- .....||.|.|||+|+
T Consensus 106 G~y~~~C~~~cg~~H~~M~G~iiVePk 132 (132)
T d1fwxa1 106 GVYWYYCQWFCHALHMEMRGRMLVEPK 132 (132)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred eEEEEECccccCcchhcCEEEEEEEcC
Confidence 9999999942 2223599999999984
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.60 E-value=2.1e-17 Score=138.75 Aligned_cols=92 Identities=20% Similarity=0.187 Sum_probs=65.2
Q ss_pred EEEEEECCcCCC--ceEEEecCCEEEEEEEECC--CCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCc
Q 009127 47 QQGILINGQFPG--PQIDAVTNDNLIISVYNYL--REPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQI 122 (543)
Q Consensus 47 ~~~~~~Ng~~pg--P~i~v~~Gd~v~i~~~N~l--~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~ 122 (543)
..+|++||..+| |.|++++||+|+++|.|.. +..+++|+||.... .+|....+.+|.||++++|+|++ +.+
T Consensus 21 ~~~~tiNG~~~~~~~~~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~----~~~~~~dtv~i~pg~~~~v~~~a-~~p 95 (116)
T d1sdda2 21 SLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHKISAITLVSATSTTANMTV-SPE 95 (116)
T ss_dssp CEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE----ETTEECSCCCEETTCCBC---------
T ss_pred CcEEEECCCcCCCCCCeEEeCCCEEEEEEeccccCCCceeEEEeccccc----cCCcccceEeecccEEEEEEEEc-CCC
Confidence 367999999988 6799999999999999954 56789999998764 23333345889999999999999 579
Q ss_pred ccceecCCchhhhhccceeEE
Q 009127 123 GSYFYFPSFLFHKAAGAFGGI 143 (543)
Q Consensus 123 Gt~wYH~H~~~q~~~Gl~G~l 143 (543)
|+||||||...+...||.|.|
T Consensus 96 G~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 96 GRWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp CCCCCBCCSTTTGGGTCBCCC
T ss_pred eEEEEEcCCHHHHHccceecC
Confidence 999999999999999999864
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=99.56 E-value=1.1e-14 Score=121.00 Aligned_cols=95 Identities=15% Similarity=0.069 Sum_probs=76.5
Q ss_pred EecCCCee-EEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEE
Q 009127 39 DIYPLGVK-QQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQ 117 (543)
Q Consensus 39 ~~~~~g~~-~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~ 117 (543)
....+|.. +.++.+|+.++.++|+|++||+|+|+++|.....+++++|+... +..+.||++.+|+|+
T Consensus 17 ~~~~~g~~~~~~~~~~~~~~P~~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~------------~~~~~pG~t~~~~f~ 84 (112)
T d1ibya_ 17 ELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDAFGV------------QEVIKAGETKTISFT 84 (112)
T ss_dssp EEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEEE
T ss_pred eeccCCeEEEEEEeecCCCCCCEEEEeCCCEEEEEEEeCCCCceeeeeccccc------------ccccCCcceEEEEEE
Confidence 34567866 47777888877669999999999999999987777777777532 256789999999999
Q ss_pred eCCCcccceecCCchhhhhccceeEEEEec
Q 009127 118 AKDQIGSYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 118 ~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
+ +++|+||||||.... ..||.|.|+|.+
T Consensus 85 ~-~~~G~y~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 85 A-DKAGAFTIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp C-CSCEEEEEBCSSSCT-TTBCCEEEEEEC
T ss_pred e-ccceEEEEECcccCh-hhcCeEEEEEEC
Confidence 9 589999999996433 357999999974
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.50 E-value=6.7e-15 Score=129.89 Aligned_cols=91 Identities=11% Similarity=-0.068 Sum_probs=74.5
Q ss_pred EEecCCCcEEEEEEEeCCC-CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEE-ecCcc
Q 009127 413 VMAANFREFVEIVFQNWED-TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMA-LDNVG 490 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~-adnpG 490 (543)
.+.++.|++++|.|.|.+. +.||||||.+.+.+...+.. ....+...++..+.|++...++|+ +++||
T Consensus 61 ti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~----------~~~~~~~~~~~~v~pg~~~~~~f~~~~~pG 130 (153)
T d1e30a_ 61 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI----------DPIVAGTGFSPVPKDGKFGYTNFTWHPTAG 130 (153)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCC----------CSEEEEBCCCCCCBTTEEEEEEEEECCCSE
T ss_pred eEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccc----------cccCCCccceeeecCCCEEEEEEEeCCCCe
Confidence 4788999999999999764 68999999987766544321 111234678888899999999997 58999
Q ss_pred cceeeecchhhhhcccEEEEEEe
Q 009127 491 MWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 491 ~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|.||||+..|...||+..|.|+
T Consensus 131 ty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 131 TYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEC
T ss_pred EEEEeCCchhHHHCCCEEEEEEC
Confidence 99999999999999999999884
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.40 E-value=7e-14 Score=103.02 Aligned_cols=46 Identities=26% Similarity=0.503 Sum_probs=40.7
Q ss_pred cCCCCCeEEEEEEeCCCcc---------cceecCCch--hhhhccceeEEEEecCCC
Q 009127 105 PIPPGKNFTYVLQAKDQIG---------SYFYFPSFL--FHKAAGAFGGIRIWSRPR 150 (543)
Q Consensus 105 ~i~PG~~~~y~f~~~~~~G---------t~wYH~H~~--~q~~~Gl~G~liV~~~~~ 150 (543)
+|.||++|+|+|++++.+| |||||||.. .|+.+||+|+|||+++..
T Consensus 2 ~V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g~ 58 (67)
T d1sddb1 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGT 58 (67)
T ss_dssp CBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTS
T ss_pred cCCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCCC
Confidence 5899999999999986666 999999975 589999999999998764
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.30 E-value=1.3e-12 Score=111.15 Aligned_cols=89 Identities=19% Similarity=0.116 Sum_probs=66.5
Q ss_pred EecCCCcEEEEEEEeCCC-CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 414 MAANFREFVEIVFQNWED-TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~-~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
+.++.|+++++.+.|... ..+-+|.||.++.- .. +.. .....+...|.||++.+.+|.+++||.|
T Consensus 36 i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~~--~~---~~~---------~~~~~~~~~I~PG~s~~y~f~a~~~Gt~ 101 (129)
T d1aoza1 36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQRG--TP---WAD---------GTASISQCAINPGETFFYNFTVDNPGTF 101 (129)
T ss_dssp EEEETTCEEEEEEEECCSSCCBCEEEETCCCTT--CG---GGS---------CCBTTTBCCBCTTCEEEEEEECCSCEEE
T ss_pred EEEECCcEEEEEEEeCCCCCCeeeeeccceeec--cC---ccc---------cccccccceECCCCEEEEEEECCCCCce
Confidence 567889999999999743 45667777765311 11 000 0111234458899999999999999999
Q ss_pred eeeecchhhhhcccEEEEEEecCC
Q 009127 493 NIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
+||||+..|...||+..+.|.+++
T Consensus 102 ~YH~H~~~h~~~Gm~G~~iV~~~~ 125 (129)
T d1aoza1 102 FYHGHLGMQRSAGLYGSLIVDPPQ 125 (129)
T ss_dssp EEEECSTTTGGGTCEEEEEEECCT
T ss_pred EEecCCHHHHhCCCEEEEEEcCCC
Confidence 999999999999999999998765
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.27 E-value=9.6e-12 Score=108.73 Aligned_cols=82 Identities=12% Similarity=0.086 Sum_probs=63.5
Q ss_pred EEecCCCcEEEEEEEeCC--CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcc
Q 009127 413 VMAANFREFVEIVFQNWE--DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVG 490 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG 490 (543)
++.++.|++++|.+.|.. ...|.+|+||..... + -...-.|+||+..+++|+++++|
T Consensus 63 ti~v~~Gd~v~i~~~N~~~~~~~H~~~~h~~~~~~-----~----------------~~~~~~i~PG~t~ty~f~a~~~G 121 (153)
T d1mzya1 63 LMIVHEGDYVELTLINPPENTMPHNIDFHAATGAL-----G----------------GGGLTLINPGEKVVLRFKATRAG 121 (153)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG-----G----------------GGGGCCBCTTEEEEEEEECCSCE
T ss_pred cEEEeCCCEEEEEEEcCCCCceEccCccccCCcCC-----C----------------CCccccccCCCEEEEEEEcCCCc
Confidence 367889999999999954 346889998864210 0 00112478999999999999999
Q ss_pred cceeeec-----chhhhhcccEEEEEEecC
Q 009127 491 MWNIRSE-----NWARQYLGQQFYLRVYSP 515 (543)
Q Consensus 491 ~w~~HCH-----il~Hed~GMm~~~~V~~p 515 (543)
.|+|||| +..|..+||++.+.|..+
T Consensus 122 t~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~ 151 (153)
T d1mzya1 122 AFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 151 (153)
T ss_dssp EEEEECCCSTTHHHHHHHTTCEEEEEEECT
T ss_pred eEEEEeCCcccccHhHHhCCCEEEEEEecC
Confidence 9999999 567999999999988544
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.26 E-value=9e-12 Score=105.56 Aligned_cols=96 Identities=13% Similarity=0.149 Sum_probs=75.3
Q ss_pred CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCc
Q 009127 43 LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQI 122 (543)
Q Consensus 43 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~ 122 (543)
++....++.+..++..+.|+|++||+|+++++|.....-.+|.+++...+ + +..+.||++.++.|++ +++
T Consensus 35 ~~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~------v---~~~~~PG~t~~~~f~~-~~~ 104 (131)
T d1qnia1 35 NKVRVYMTSVAPQYGMTDFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHG------V---SMEISPQQTASVTFTA-GKP 104 (131)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT------E---EEEECTTCEEEEEEEC-CSS
T ss_pred CceeEEEEEeccCCccceEEecCCCEEEEEEEccCCCCcceEEEEEeccC------c---ccccCCCceEEEEEEc-CCC
Confidence 34566789999999999999999999999999987766566666653221 1 2457899999999999 589
Q ss_pred ccceecCCch-hhhhccceeEEEEecC
Q 009127 123 GSYFYFPSFL-FHKAAGAFGGIRIWSR 148 (543)
Q Consensus 123 Gt~wYH~H~~-~q~~~Gl~G~liV~~~ 148 (543)
|+|||||+.- .....+|.|.|+|+++
T Consensus 105 G~y~~~C~~~cg~~H~~M~g~i~Vepa 131 (131)
T d1qnia1 105 GVYWYYCNWFCHALHMEMVGRMLVEAA 131 (131)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEECC
T ss_pred EEEEEECccccCcchhcCeeEEEEEeC
Confidence 9999999842 2222589999999974
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.21 E-value=2.7e-11 Score=106.39 Aligned_cols=140 Identities=13% Similarity=0.082 Sum_probs=105.9
Q ss_pred CCCCceEEEeeeeeeccH------------HHHHHHhccCCCCCCCCeEEEcCCCC---CcceEEEecCCEEEEEEEEcC
Q 009127 157 PPAGDFTVLAGDWYRSNH------------YVLRRLLDSGHNLPFPDGLLINGRGW---NGYTFTVEPGRTYRFRISNVG 221 (543)
Q Consensus 157 ~~~~e~~l~~~d~~~~~~------------~~~~~~~~~g~~~~~~~~~liNG~~~---~~p~~~v~~G~~~rlRiiN~~ 221 (543)
.||+++.+.-+|+|...+ ....+.++. .....|+++++||+.. ..-.++++.||+| ||+|++
T Consensus 6 ~yD~~~y~~~~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~-m~~~~Pt~vvFNG~v~altg~~~l~akvGErV--~i~~~~ 82 (173)
T d2bw4a2 6 TYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGALTGDHALTAAVGERV--LVVHSQ 82 (173)
T ss_dssp CCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEE--EEEEEE
T ss_pred ccceEEEecccEeecCCCCCCCccCcCChhhcchhHHHH-HhccCCCEEEECCCccccccccCcccccCCeE--EEEecC
Confidence 569999999999996321 111111110 0013588999999874 1236999999966 677888
Q ss_pred CcceEEEEEeCCeeEEEEEcCcccccc--ccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCC
Q 009127 222 LTTSINFRIQGHSMKLVEVEGSHTLQN--TYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSR 299 (543)
Q Consensus 222 ~~~~~~~~i~g~~~~via~DG~~~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~ 299 (543)
+.+..+||++|+.|.++..+|.+..|. ..+++.+.||+++.+.++++ .||.|.++|+...........++|.++|..
T Consensus 83 ~n~~s~fHliG~hFD~V~~~G~~~~~p~~~~qTv~VppG~a~~ve~~f~-~PG~y~~v~H~l~ea~~~G~~g~l~V~G~~ 161 (173)
T d2bw4a2 83 ANRDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFELGAAGHFKVTGEW 161 (173)
T ss_dssp SSSCBCEEEETCCEEEEETTCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred CCCCccceeccceeEEECCCCcccCCCcCCceeEEccCCccEEEEEEec-CceEEEEEechHHHHHhCCCEEEEEEcCCC
Confidence 888899999999999999999987543 35799999999999999999 799999999864332234688999998875
Q ss_pred C
Q 009127 300 R 300 (543)
Q Consensus 300 ~ 300 (543)
.
T Consensus 162 ~ 162 (173)
T d2bw4a2 162 N 162 (173)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.21 E-value=3.3e-11 Score=105.68 Aligned_cols=82 Identities=16% Similarity=0.119 Sum_probs=61.1
Q ss_pred EEecCCCcEEEEEEEeCCC--CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcc
Q 009127 413 VMAANFREFVEIVFQNWED--TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVG 490 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~--~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG 490 (543)
++.++.|++++|.+.|... ..|.+|+||... +.+. ...-.|.||++.+++|++++||
T Consensus 65 ~I~v~~GD~V~i~l~N~~~~~~~Hg~~~h~~~~-----~~~~----------------~~~~~i~PGet~ty~f~a~~pG 123 (157)
T d2bw4a1 65 LMVVHENDYVELRLINPDTNTLLHNIDFHAATG-----ALGG----------------GALTQVNPGEETTLRFKATKPG 123 (157)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCS-----GGGG----------------GGGCCBCTTEEEEEEEECCSCE
T ss_pred eEEEECCcEEEEEEEeCCCCcceEeeeecccCC-----CcCC----------------cceeeECcCCEEeEEEECCCCc
Confidence 3678899999999999532 345666665321 1000 0111378999999999999999
Q ss_pred cceeeec----chhhhhcccEEEEEEecC
Q 009127 491 MWNIRSE----NWARQYLGQQFYLRVYSP 515 (543)
Q Consensus 491 ~w~~HCH----il~Hed~GMm~~~~V~~p 515 (543)
.|.|||| +.+|...||.+.|.|.+.
T Consensus 124 t~~YH~H~~~~~~~h~~~Gl~G~~iV~p~ 152 (157)
T d2bw4a1 124 VFVYHCAPEGMVPWHVTSGMNGAIMVLPR 152 (157)
T ss_dssp EEEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred cceEEECCCCchHHHHhCCCEEEEEEeCC
Confidence 9999999 678999999999988543
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.19 E-value=4.7e-11 Score=104.60 Aligned_cols=140 Identities=14% Similarity=0.084 Sum_probs=107.0
Q ss_pred CCCCceEEEeeeeeeccHH------------HHHHHhccCCCCCCCCeEEEcCCCC---CcceEEEecCCEEEEEEEEcC
Q 009127 157 PPAGDFTVLAGDWYRSNHY------------VLRRLLDSGHNLPFPDGLLINGRGW---NGYTFTVEPGRTYRFRISNVG 221 (543)
Q Consensus 157 ~~~~e~~l~~~d~~~~~~~------------~~~~~~~~g~~~~~~~~~liNG~~~---~~p~~~v~~G~~~rlRiiN~~ 221 (543)
.||+++.+.-+|+|...++ ...+.++. .....|+++.+||+.. ....++++.||+|| |+|++
T Consensus 6 ~yD~~yyv~e~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~-m~~~~P~~vvFNG~~galt~~~~l~akvGe~Vr--i~~~~ 82 (177)
T d1oe1a2 6 HYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALTGANALTAKVGETVL--LIHSQ 82 (177)
T ss_dssp CCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTSGGGCEEEETTCEEE--EEEEE
T ss_pred ccceEEEecccEeecCCCCCCCccccCChhhcchhHHHH-HhccCCcEEEECCccccccCCCCcccccCCeEE--EEecC
Confidence 5699999999999973221 11111100 0013688999999975 24479999999875 56788
Q ss_pred CcceEEEEEeCCeeEEEEEcCcccccc--ccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCC
Q 009127 222 LTTSINFRIQGHSMKLVEVEGSHTLQN--TYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSR 299 (543)
Q Consensus 222 ~~~~~~~~i~g~~~~via~DG~~~~p~--~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~ 299 (543)
+.+..+||+.|+.|..+..+|.+..|. .++++.+.||++..+.++++ .||.|.++++...........|+|.+.|..
T Consensus 83 ~N~~ssfHlIG~hfD~V~~~G~~~n~p~~~~qT~~V~pG~~~~v~~tf~-~PG~Y~fV~H~L~ea~~~Ga~g~l~V~G~~ 161 (177)
T d1oe1a2 83 ANRDTRPHLIGGHGDWVWETGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAFELGAAGHIKVEGKW 161 (177)
T ss_dssp SSSCBCEEETTCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred CCCCccceecccccceEccCCeeCCCCCcCceeEEecCCccEEEEEEec-CceEEEEEecHHHHHHhcCCeEEEEecCCC
Confidence 888999999999999999999987643 35799999999999999998 799999999874432235788999998775
Q ss_pred C
Q 009127 300 R 300 (543)
Q Consensus 300 ~ 300 (543)
.
T Consensus 162 ~ 162 (177)
T d1oe1a2 162 N 162 (177)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.16 E-value=9.6e-11 Score=102.78 Aligned_cols=81 Identities=15% Similarity=0.158 Sum_probs=63.0
Q ss_pred EecCCCcEEEEEEEeCCCC--CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 414 MAANFREFVEIVFQNWEDT--VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
+.++.|++++|.+.|.... .|.||+||..+.+ ++. .+ -.|.||+..+++|+++.||.
T Consensus 67 I~v~~Gd~v~v~~~N~~~~~h~h~ih~hg~~~~~---~g~--------~~----------~~I~PG~t~ty~f~a~~~Gt 125 (159)
T d1oe2a1 67 LVVHEGDYVQLTLVNPATNAMPHNVEFHGATGAL---GGA--------KL----------TNVNPGEQATLRFKADRSGT 125 (159)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---GGG--------GG----------CCBCTTEEEEEEEECCSCEE
T ss_pred EEEECCcEEEEEEECCCccccccceeeccccCCC---CCc--------cc----------ccCCCCCeEEEEEEcCCCce
Confidence 5678999999999997543 5778888864321 000 00 02779999999999999999
Q ss_pred ceeeec----chhhhhcccEEEEEEecC
Q 009127 492 WNIRSE----NWARQYLGQQFYLRVYSP 515 (543)
Q Consensus 492 w~~HCH----il~Hed~GMm~~~~V~~p 515 (543)
|.|||| +..|..+||.+.+.|...
T Consensus 126 ~~yH~H~~~~~~~q~~~Gl~G~liV~p~ 153 (159)
T d1oe2a1 126 FVYHCAPEGMVPWHVVSGMSGTLMVLPR 153 (159)
T ss_dssp EEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred EEEEeCCCCCchhHHhCCCEEEEEEECC
Confidence 999999 678999999999988643
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.16 E-value=2.8e-11 Score=105.63 Aligned_cols=81 Identities=14% Similarity=0.080 Sum_probs=59.1
Q ss_pred EecCCCcEEEEEEEeCCCC--CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 414 MAANFREFVEIVFQNWEDT--VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~~--~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
+.++.|+++++.+.|.... .|.+|+|+... +.+. ...+. |.||++.+.+|++++||.
T Consensus 60 i~v~~Gd~v~v~~~N~~~~~~~H~~~~h~~~~-----~~~~--------------~~~~~--i~PG~t~~y~f~a~~~Gt 118 (151)
T d1kbva1 60 IRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGG--------------AAATF--TAPGRTSTFSFKALQPGL 118 (151)
T ss_dssp EEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG--------------TTTTC--BCTTEEEEEEEECCSCEE
T ss_pred EEEECCCEEEEEEEcCCCCceeeecccccccc-----CCCC--------------cceee--eCCCCEEEEEEeCCCCeE
Confidence 6678999999999996443 34455554321 1110 11122 678999999999999999
Q ss_pred ceeeecc---hhhhhcccEEEEEEecC
Q 009127 492 WNIRSEN---WARQYLGQQFYLRVYSP 515 (543)
Q Consensus 492 w~~HCHi---l~Hed~GMm~~~~V~~p 515 (543)
|+||||. .+|.++||++.+.|.+.
T Consensus 119 ~~YH~H~~~~~~h~~~Gm~G~liV~p~ 145 (151)
T d1kbva1 119 YIYHCAVAPVGMHIANGMYGLILVEPK 145 (151)
T ss_dssp EEEECCCSSHHHHHHTTCEEEEEEECT
T ss_pred EEEECCCCChHHHHhCCCEEEEEEECC
Confidence 9999994 57999999999998643
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.15 E-value=6.4e-11 Score=105.83 Aligned_cols=90 Identities=22% Similarity=0.313 Sum_probs=73.8
Q ss_pred CeEEEcCCCC--CcceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcccc---ccccCeEEEcCCCeEEEEE
Q 009127 191 DGLLINGRGW--NGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHTL---QNTYAALDIHLGQTYSVLV 265 (543)
Q Consensus 191 ~~~liNG~~~--~~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~~---p~~~~~v~l~pgeR~dv~v 265 (543)
..++||||.+ +.|.++++.|+++||||+|.+....|+|||||+.|+|++.+|.... +...|++.+.|++. .++|
T Consensus 71 ~~~tING~~f~~~~p~~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~~~~~~~kDTv~v~~~~~-~v~v 149 (181)
T d1kv7a3 71 HANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNVS-EVLV 149 (181)
T ss_dssp GCEEETTBCCCTTCCSEECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEESSSEE-EEEE
T ss_pred cceeECCEecCCCCCceEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCccccCCcceeEEEeCCCce-EEEE
Confidence 5689999998 4678999999999999999998668999999999999999998763 46789999977643 4444
Q ss_pred Ee--CC-CCcceEEEEeec
Q 009127 266 TM--DQ-APQDYYIVVSSR 281 (543)
Q Consensus 266 ~~--~~-~~g~y~i~~~~~ 281 (543)
++ +. .+|.|.++|+..
T Consensus 150 ~f~~~~~~~G~w~fHCHil 168 (181)
T d1kv7a3 150 KFNHDAPKEHAYMAHCHLL 168 (181)
T ss_dssp CCCSCCCGGGCEEEEESSH
T ss_pred EEEeeCCCCCeEEEeCChH
Confidence 44 32 358999999864
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.15 E-value=1.9e-11 Score=107.89 Aligned_cols=90 Identities=17% Similarity=0.046 Sum_probs=70.4
Q ss_pred EecCCCcEEEEEEEeCC-CCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 414 MAANFREFVEIVFQNWE-DTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~-~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
+.++.|+.+++.+.|.. ...+.+|+||.++.......| .+.......++++++...+|+++.+|.|
T Consensus 69 I~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g-------------~~~~~~~~i~~pg~~~~y~f~~~~~Gt~ 135 (162)
T d2q9oa1 69 IVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDG-------------ANGVTECPIPPKGGQRTYRWRARQYGTS 135 (162)
T ss_dssp EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSC-------------CBTTTBCCBCTTTEEEEEEEECCSCEEE
T ss_pred EEEECCcEEEEEEEecCcccccccccccccccCCCcCCC-------------CcccccceecCCCCEEEeeecCCCCEEE
Confidence 56789999999999964 467889999987643222111 0112233446789999999999999999
Q ss_pred eeeecchhhhhcccEEEEEEecCC
Q 009127 493 NIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
+||||+..|...||.+.|.|.+|+
T Consensus 136 wYH~H~~~q~~~Gl~G~~iV~~p~ 159 (162)
T d2q9oa1 136 WYHSHFSAQYGNGVVGTIQINGPA 159 (162)
T ss_dssp EEEECSTTGGGGTCEEEEEEECCC
T ss_pred EeecCCHHHHhCCCEEEEEECCCC
Confidence 999999999999999999998775
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=99.01 E-value=4.9e-10 Score=96.35 Aligned_cols=92 Identities=14% Similarity=0.106 Sum_probs=65.8
Q ss_pred cCCCceEEEecCCEEEEEEEECC--CCCceeecCccc----------------C--CCCCCCCCCCCCCCcCCCCCeEEE
Q 009127 55 QFPGPQIDAVTNDNLIISVYNYL--REPFLISWNGLQ----------------Q--RRNSWQDGVYGTTCPIPPGKNFTY 114 (543)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~~~N~l--~~~~~iH~HG~~----------------~--~~~~~~DG~p~tq~~i~PG~~~~y 114 (543)
+|--.+|+|++||+|++.++|.- ..+++++..... . ...+.++.+......+.||++.++
T Consensus 28 ~F~p~~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i 107 (139)
T d1qhqa_ 28 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 107 (139)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEcCCeEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccccccCCcceEEE
Confidence 34446999999999999999975 345554432211 0 011111111112355899999999
Q ss_pred EEEeCCCcccceecCCchhhhhccceeEEEEec
Q 009127 115 VLQAKDQIGSYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 115 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
.|+++ ++|+||||||...|...||.|.|+|.|
T Consensus 108 ~f~~~-~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 108 TFRTP-APGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp EEECC-SSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEecC-CCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 99996 799999999999999999999999975
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=99.01 E-value=1.5e-10 Score=99.57 Aligned_cols=99 Identities=8% Similarity=-0.168 Sum_probs=69.5
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEee-------cCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEE
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGM-------DGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMA 485 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~-------~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~ 485 (543)
.++++.|++|+|+|.|.+...||.+++...+..... ..+.... .....-......+|..+.+++...|+|+
T Consensus 33 ~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~v~~~t~~~~pg~s~~i~f~ 110 (139)
T d1qhqa_ 33 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADAL--FVPPPDTPNALAWTAMLNAGESGSVTFR 110 (139)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGT--TCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred eEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhc--cccCCCcccccccccccCCcceEEEEEe
Confidence 477899999999999998777665554332211000 0000000 0000011234678889999999999999
Q ss_pred ecCcccceeeecchhhhhcccEEEEEEe
Q 009127 486 LDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 486 adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
++.||.|.||||+..|+..||.+.+.|.
T Consensus 111 ~~~~G~y~f~Ct~pgH~~~GM~G~i~V~ 138 (139)
T d1qhqa_ 111 TPAPGTYLYICTFPGHYLAGMKGTLTVT 138 (139)
T ss_dssp CCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cCCCeEEEEEcCCcCcccccCeEEEEEc
Confidence 9999999999999999999999999985
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.99 E-value=8.8e-10 Score=96.14 Aligned_cols=90 Identities=17% Similarity=0.170 Sum_probs=75.4
Q ss_pred eEEEcCCCCC-cceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCcc---------------------ccccc
Q 009127 192 GLLINGRGWN-GYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSH---------------------TLQNT 249 (543)
Q Consensus 192 ~~liNG~~~~-~p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~---------------------~~p~~ 249 (543)
.++|||+.+. ....+++.|++.+|+|+|.+.. .|+|||||+.|+||+.++.. .++..
T Consensus 29 ~~~ing~~~~~~~~~~~~~G~~e~W~i~N~~~~-~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (154)
T d1gska3 29 VLLLNNKRWHDPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGW 107 (154)
T ss_dssp EEEETTBCTTSCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSC
T ss_pred eEEECCcCcCCCcccccCCCCEEEEEEEeCCCC-CCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcc
Confidence 6899999973 3456789999999999999886 79999999999999887631 12335
Q ss_pred cCeEEEcCCCeEEEEEEeCCCCcceEEEEeecc
Q 009127 250 YAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 250 ~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~ 282 (543)
.|++.+.||+.+.|.+++.+.+|.|.++|+...
T Consensus 108 kDTv~v~pg~~~~i~~~~~d~pG~w~~HCHil~ 140 (154)
T d1gska3 108 KDTIQAHAGEVLRIAATFGPYSGRYVWHCHILE 140 (154)
T ss_dssp BSEEEECTTEEEEEEEECCSCCEEEEEEESCHH
T ss_pred cccEEeCCCCEEEEEEEeCCCCcceEEecCcch
Confidence 799999999999999997658999999998753
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.95 E-value=4.1e-10 Score=95.11 Aligned_cols=90 Identities=13% Similarity=0.075 Sum_probs=66.7
Q ss_pred EEecCCCcEEEEEEEeCCC-----CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEE-e
Q 009127 413 VMAANFREFVEIVFQNWED-----TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMA-L 486 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~-----~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~-a 486 (543)
++.++.|+.+++.+.|..+ ..|.||+||-++.. ..+... . .---...|+||+..+.+|+ +
T Consensus 35 ~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~-----~~~~dg-v--------~g~~~~~I~PG~~~~y~~~~~ 100 (131)
T d1hfua1 35 LIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRG-----TNWADG-A--------DGVNQCPISPGHAFLYKFTPA 100 (131)
T ss_dssp EEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTT-----CGGGSC-C--------BTTTBCCBCTTCEEEEEECCT
T ss_pred eEEEECCCEEEEEEEECCCCccccccceEEeCCcccCC-----CCCCCC-C--------cccccceECCCCeEEEEEeCC
Confidence 4667899999999999653 35899999954311 111100 0 0011235789999999998 5
Q ss_pred cCcccceeeecchhhhhcccEEEEEEecCC
Q 009127 487 DNVGMWNIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 487 dnpG~w~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
+.+|.|.||||...|...||.+.+.|.+++
T Consensus 101 ~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 101 GHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp TCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 789999999999999999999999998765
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.94 E-value=5.8e-10 Score=94.18 Aligned_cols=89 Identities=13% Similarity=0.142 Sum_probs=66.1
Q ss_pred EecCCCcEEEEEEEeCCC-----CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe-c
Q 009127 414 MAANFREFVEIVFQNWED-----TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMAL-D 487 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~-----~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a-d 487 (543)
+.++.|+.+++.+.|... ..|.+|+||...- ..+ +.. .+..-....|+||++...+|++ +
T Consensus 36 I~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~--~~~---~~d---------~~~~~s~~~i~PG~s~~Y~~~~~~ 101 (130)
T d1gyca1 36 ITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQA--GTN---WAD---------GPAFVNQCPIASGHSFLYDFHVPD 101 (130)
T ss_dssp EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT--TCG---GGS---------CCBTTTBCCBCTTEEEEEEEECSS
T ss_pred EEEECCeEEEEEEEecCCCcccCCceeEEecccccc--ccC---CCC---------CccccccCCCCCCCeEEEEEECCC
Confidence 567899999999999754 4567888886531 110 000 0111112348899999999997 5
Q ss_pred CcccceeeecchhhhhcccEEEEEEecCC
Q 009127 488 NVGMWNIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 488 npG~w~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
.+|.|.||||...|...||.+.+.|.+|+
T Consensus 102 ~~Gt~wYH~H~~~~~~~Gl~G~liV~~p~ 130 (130)
T d1gyca1 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130 (130)
T ss_dssp CCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCceeEEecCCHHHHhCCCEEEEEEeCCC
Confidence 79999999999999999999999998875
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=98.94 E-value=9.1e-10 Score=90.69 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=62.1
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|+.|+|+|.|.+...|+||+|++.. +..+.||+...++|+++.||.|
T Consensus 39 ~i~v~~Gd~V~~~~~n~d~~~H~~~i~~~~~---------------------------~~~~~pG~t~~~~f~~~~~G~y 91 (112)
T d1ibya_ 39 TLVVKKGDAVKVVVENKSPISEGFSIDAFGV---------------------------QEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEeCCCCceeeeeccccc---------------------------ccccCCcceEEEEEEeccceEE
Confidence 4678899999999999988899999998633 2345678999999999999999
Q ss_pred eeeecchhhhhcccEEEEEEec
Q 009127 493 NIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~~ 514 (543)
.||||+.-| ..||.+.+.|.+
T Consensus 92 ~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 92 TIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCT-TTBCCEEEEEEC
T ss_pred EEECcccCh-hhcCeEEEEEEC
Confidence 999998544 367999999864
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=8.4e-10 Score=99.77 Aligned_cols=97 Identities=12% Similarity=0.069 Sum_probs=73.6
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC---
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN--- 488 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn--- 488 (543)
++|.++.|++++++|.|....+|+||.||..|.....+....+. .....+.+..|+||+..+.+|.+..
T Consensus 76 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~~g~~~~dg--------~~~~~~~~~~v~PG~t~tY~~~~~~~~~ 147 (192)
T d2j5wa1 76 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDN--------TTDFQRADDKVYPGEQYTYMLLATEEQS 147 (192)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCC--------CCGGGTGGGCBCTTCEEEEEEECCSTTS
T ss_pred CeEEEECCcEEEEEEEeCCCCCcceeccCcccCCcccccccCCC--------CCCCCcccCcccCCCEEEEEEEccCccc
Confidence 46889999999999999988999999999987554333211111 1122344556899999999998753
Q ss_pred -------cccceeeecch--hhhhcccEEEEEEecCC
Q 009127 489 -------VGMWNIRSENW--ARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 489 -------pG~w~~HCHil--~Hed~GMm~~~~V~~p~ 516 (543)
+|.|+||||+. .|..+||++.+.|..+.
T Consensus 148 p~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g 184 (192)
T d2j5wa1 148 PGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKD 184 (192)
T ss_dssp CCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTT
T ss_pred cccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEccCC
Confidence 57899999984 58889999999997654
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.82 E-value=1.3e-08 Score=87.95 Aligned_cols=140 Identities=13% Similarity=0.050 Sum_probs=108.2
Q ss_pred CCCCceEEEeeeeeeccHH------------HHHHHhccCCCCCCCCeEEEcCCCCC---cceEEEecCCEEEEEEEEcC
Q 009127 157 PPAGDFTVLAGDWYRSNHY------------VLRRLLDSGHNLPFPDGLLINGRGWN---GYTFTVEPGRTYRFRISNVG 221 (543)
Q Consensus 157 ~~~~e~~l~~~d~~~~~~~------------~~~~~~~~g~~~~~~~~~liNG~~~~---~p~~~v~~G~~~rlRiiN~~ 221 (543)
.+|+++.++-+|+|...++ .....++. .....|+.+.+||+... .-.+++++||+| ||+|++
T Consensus 10 ~yDr~yYvge~dfY~p~d~~G~~k~y~~~~~~~~d~~e~-m~~l~PthVVFNG~vgaltg~~aL~AkvGEtV--~~~~~g 86 (178)
T d1mzya2 10 RYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALTGEGALKAKVGDNV--LFVHSQ 86 (178)
T ss_dssp CCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTSGGGCEEEETTCEE--EEEEEE
T ss_pred ccCeEEEEecceeecCCCCCCCccccCChhhcchhHHHH-HHccCCCEEEECCccCcccCCCCcccccCCeE--EEeccc
Confidence 5599999999999962211 11111110 01135899999999762 347999999987 679999
Q ss_pred CcceEEEEEeCCeeEEEEEcCccccc--cccCeEEEcCCCeEEEEEEeCCCCcceEEEEeeccCCCccceEEEEEecCCC
Q 009127 222 LTTSINFRIQGHSMKLVEVEGSHTLQ--NTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSR 299 (543)
Q Consensus 222 ~~~~~~~~i~g~~~~via~DG~~~~p--~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~il~y~~~~ 299 (543)
..+.-+||+-|..|.-+-.+|.+..+ ..++++.|.+|+..-+.++++ .||.|.+..++..+.......|+|.++|..
T Consensus 87 pN~~SsfHvIGg~~D~V~~~G~~~n~p~~~~qT~~v~~G~a~~~~~tf~-~PG~Y~~VdH~l~~A~~kGA~g~l~V~G~~ 165 (178)
T d1mzya2 87 PNRDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVHKGATAHVLVEGEW 165 (178)
T ss_dssp SSSCBCEEEETCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred CCCCCCcccccCccceEccCCccCCCCCCCceEEEecCCceeEEEEEeC-CCeEEEEEccHHHHHHhCCCeEEEEeCCCC
Confidence 99999999999999988889988764 347899999999999999999 699999999875443335788999998875
Q ss_pred C
Q 009127 300 R 300 (543)
Q Consensus 300 ~ 300 (543)
.
T Consensus 166 ~ 166 (178)
T d1mzya2 166 D 166 (178)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=5.4e-09 Score=89.21 Aligned_cols=85 Identities=11% Similarity=0.078 Sum_probs=67.1
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCc-cc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNV-GM 491 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnp-G~ 491 (543)
++.++.|+.+++.+.|.....|.||+||.+. -....|. + . ..++||+..+.+|.++.+ |.
T Consensus 47 ~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~--~~~~dG~-------------~--~--~~i~pg~~~~y~~~~~~~aGt 107 (140)
T d1kv7a1 47 AVKLQRGKAVTVDIYNQLTEETTLHWHGLEV--PGEVDGG-------------P--Q--GIIPPGGKRSVTLNVDQPAAT 107 (140)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCC-------------T--T--CCBCTTCEEEEEEECCSCSEE
T ss_pred eEEEECCCEEEEEEEeCccccccEeeeeeec--CCccCCC-------------c--c--ceEccCCceeEEEEEecCCee
Confidence 4678899999999999999999999999753 1111110 0 0 127789999999999886 99
Q ss_pred ceeeecc----hhhhhcccEEEEEEecCC
Q 009127 492 WNIRSEN----WARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 492 w~~HCHi----l~Hed~GMm~~~~V~~p~ 516 (543)
|.||||. ..|..+||++.+.|.+++
T Consensus 108 ~wyH~H~~~~~~~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 108 CWFHPHQHGKTGRQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp EEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred EEEEECCCCChHHHHhCCCeEEEEECCcc
Confidence 9999996 468889999999998765
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.68 E-value=3.1e-08 Score=83.84 Aligned_cols=91 Identities=14% Similarity=0.136 Sum_probs=66.7
Q ss_pred EecCCCcEEEEEEEeCCC-----CCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe-c
Q 009127 414 MAANFREFVEIVFQNWED-----TVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMAL-D 487 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~-----~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a-d 487 (543)
+.++.|+.+++.+.|... ..+.+|+||-+.- ... + .+ ....-....|+||+..+.+|++ +
T Consensus 36 i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~--~~~---~-~d--------gv~~~t~~~I~PG~~~~Y~~~~~~ 101 (136)
T d1v10a1 36 ITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQA--GTT---E-MD--------GPAFVNQCPIIPNESFVYDFVVPG 101 (136)
T ss_dssp EEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCT--TCG---G-GS--------CCBTTTBCCBCTTEEEEEEEECTT
T ss_pred EEEECCcEEEEEEEeCCCCcccCcceeEEecccccc--ccc---c-cC--------CCCccccceECCCCeEEEEEECCC
Confidence 667899999999999644 3567999994320 000 0 00 0011112447899999999998 5
Q ss_pred CcccceeeecchhhhhcccEEEEEEecCCCC
Q 009127 488 NVGMWNIRSENWARQYLGQQFYLRVYSPANS 518 (543)
Q Consensus 488 npG~w~~HCHil~Hed~GMm~~~~V~~p~~~ 518 (543)
.+|.|.||||...|...||.+.+.|.+++++
T Consensus 102 ~~Gt~wYH~H~~~q~~~GL~G~liV~~~~dp 132 (136)
T d1v10a1 102 QAGTYWYHSHLSTQYCDGLRGAFVVYDPNDP 132 (136)
T ss_dssp CCEEEEEEECSTTGGGGTCEEEEEEECTTCT
T ss_pred CccceEEecCchhHHhCCCEEEEEECCCccc
Confidence 6899999999999999999999999887653
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.57 E-value=1.3e-07 Score=85.74 Aligned_cols=79 Identities=15% Similarity=0.296 Sum_probs=68.6
Q ss_pred ceEEEecCCEEEEEEEEcCCcceEEEEEeCCeeEEEEEcCccc----cccccCeEEE-cCCCeEEEEEEeCCCCcceEEE
Q 009127 203 YTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT----LQNTYAALDI-HLGQTYSVLVTMDQAPQDYYIV 277 (543)
Q Consensus 203 p~~~v~~G~~~rlRiiN~~~~~~~~~~i~g~~~~via~DG~~~----~p~~~~~v~l-~pgeR~dv~v~~~~~~g~y~i~ 277 (543)
..+.++.|+.+.+-++|......|+||||||+|+|++.+|... .|...|++.+ .+|+++.+.+.++ .+|.|.++
T Consensus 70 ~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~vl~~~g~~~~~~~~~~~rDtv~v~~~G~~~~ir~~ad-npG~w~~H 148 (200)
T d1hfua3 70 SVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFH 148 (200)
T ss_dssp SEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEE
T ss_pred ceEEecCCcceEEEEeeccccccCceeecCCcEEEEeccCCCCCccccCcccceEEeCCCCEEEEEEEECC-CCeeeEEE
Confidence 4688999999999999988766899999999999999998753 4778899999 5789999999988 79999999
Q ss_pred Eeecc
Q 009127 278 VSSRF 282 (543)
Q Consensus 278 ~~~~~ 282 (543)
|+...
T Consensus 149 CHi~~ 153 (200)
T d1hfua3 149 CHIEF 153 (200)
T ss_dssp ESSHH
T ss_pred eCCCh
Confidence 98753
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.55 E-value=3.6e-08 Score=78.83 Aligned_cols=82 Identities=18% Similarity=0.263 Sum_probs=53.1
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
..+|++++||+| ++.|.....+.++.+..........++....+....||.++++.| +.+|+|||+|.. |...
T Consensus 17 P~~i~v~~GdtV--~f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~tf---~~~G~y~y~C~~--H~~~ 89 (98)
T d2plta_ 17 PKTLTIKSGETV--NFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKL---TAAGEYGYYCEP--HQGA 89 (98)
T ss_dssp SSEEEECTTCEE--EEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGG--GGGG
T ss_pred CCEEEECCCCEE--EEEECCCCceeEEEecCCccccccCCcccccccccCCCceEEEEe---cCCceEEEEeCc--CCCC
Confidence 369999999986 566877666666666543221111111111123345666655554 469999999964 7778
Q ss_pred cceeEEEEe
Q 009127 138 GAFGGIRIW 146 (543)
Q Consensus 138 Gl~G~liV~ 146 (543)
||.|.|+|+
T Consensus 90 GM~G~I~Ve 98 (98)
T d2plta_ 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999996
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.53 E-value=9.1e-08 Score=86.22 Aligned_cols=88 Identities=18% Similarity=0.102 Sum_probs=66.5
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CC-------CcCCCC-CeEEEEEEeCCCcccceec
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TT-------CPIPPG-KNFTYVLQAKDQIGSYFYF 128 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq-------~~i~PG-~~~~y~f~~~~~~Gt~wYH 128 (543)
+..+.+..++.++|++.|. ..+.+|.||.........++... .. ..|+|| ++..++|.+ +.+|.|.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~~--~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~a-dnpG~w~~H 147 (190)
T d1v10a3 71 GAVISLPANQVIEISIPGG--GNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVT-DNPGPWFLH 147 (190)
T ss_dssp TTEEEECTTCEEEEEEECC--BSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEEC-CSCEEEEEE
T ss_pred ceeEEccCccEEEEEeccC--ccccccccCceEEEEEcCCCcccccccCcccCEEEeCCCeEEEEEEEEc-CCCeeEEEe
Confidence 3468999999999988884 46889999987643222222211 11 237776 567899999 579999999
Q ss_pred CCchhhhhccceeEEEEecC
Q 009127 129 PSFLFHKAAGAFGGIRIWSR 148 (543)
Q Consensus 129 ~H~~~q~~~Gl~G~liV~~~ 148 (543)
||...+...||...|++.++
T Consensus 148 CHi~~H~~~GM~~~~~~~~~ 167 (190)
T d1v10a3 148 CHIDWHLEAGLAVVFAEDIP 167 (190)
T ss_dssp ESCHHHHTTTCEEEEEESGG
T ss_pred cCchhhhhCCCcEEEEECCC
Confidence 99999999999999998763
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.53 E-value=1.1e-07 Score=80.01 Aligned_cols=77 Identities=9% Similarity=0.056 Sum_probs=61.1
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|+.|.|.|.|.+...|.+|-|+ |-+ ..-...+.||....++|+++.||.|
T Consensus 53 ~i~V~~Gd~V~~~ltN~d~~~~v~H~~~----i~~--------------------~~~~~~~~PG~~~~~~F~a~~~G~y 108 (132)
T d1fwxa1 53 SFTVKEGDEVTVIVTNLDEIDDLTHGFT----MGN--------------------YGVAMEIGPQMTSSVTFVAANPGVY 108 (132)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEE----ETT--------------------TTEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEcCCCEEEEEEEcCCCCccceEeec----hhh--------------------hccccccCCCEEEEEEEeCCCCeEE
Confidence 3678999999999999987778776553 211 1122356789999999999999999
Q ss_pred eeeecchhhh-hcccEEEEEEe
Q 009127 493 NIRSENWARQ-YLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~He-d~GMm~~~~V~ 513 (543)
.||||..-|. +.||.+.+.|+
T Consensus 109 ~~~C~~~cg~~H~~M~G~iiVe 130 (132)
T d1fwxa1 109 WYYCQWFCHALHMEMRGRMLVE 130 (132)
T ss_dssp EEECCSCCSTTCTTCEEEEEEE
T ss_pred EEECccccCcchhcCEEEEEEE
Confidence 9999987776 57999999885
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=98.51 E-value=4.6e-08 Score=89.49 Aligned_cols=89 Identities=15% Similarity=0.002 Sum_probs=69.4
Q ss_pred eEEEecCCEEEEEEEECC------CCCceeecCcccCCCCCCCCCCC-------------C--CCCcCCCCCeEEEEEEe
Q 009127 60 QIDAVTNDNLIISVYNYL------REPFLISWNGLQQRRNSWQDGVY-------------G--TTCPIPPGKNFTYVLQA 118 (543)
Q Consensus 60 ~i~v~~Gd~v~i~~~N~l------~~~~~iH~HG~~~~~~~~~DG~p-------------~--tq~~i~PG~~~~y~f~~ 118 (543)
+++++.|+.|+|.+.|.- ...+.+|+||.+.......+|.. . ....+.||+..+.+|++
T Consensus 80 v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~a 159 (214)
T d1aoza3 80 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 159 (214)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred eEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEec
Confidence 689999999999999953 45789999997663221122221 1 12348899999999999
Q ss_pred CCCcccceecCCchhhhhccceeEEEEecCC
Q 009127 119 KDQIGSYFYFPSFLFHKAAGAFGGIRIWSRP 149 (543)
Q Consensus 119 ~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 149 (543)
+.+|.|.||||...+...||...|+|.+.+
T Consensus 160 -dnpG~w~~HCH~~~H~~~GM~~~~~v~~~~ 189 (214)
T d1aoza3 160 -DNPGVWAFHCHIEPHLHMGMGVVFAEGVEK 189 (214)
T ss_dssp -CSCEEEEEEESSHHHHHTTCEEEEEECGGG
T ss_pred -CCCeeEEEEECcHHHHhCcCcEEEEEcccc
Confidence 579999999999999999999999887543
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=98.44 E-value=1.8e-08 Score=81.84 Aligned_cols=87 Identities=18% Similarity=0.287 Sum_probs=59.7
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC--C-CCCcCCCCCeEEEEEEeCCCcccceecCCch
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY--G-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL 132 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p--~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (543)
|-...|+|++||+|+ +.|.....+++.+........ ...+.. . ....+.||+++.+.|..++++|+|||+|..
T Consensus 16 F~P~~l~v~~GdtV~--f~n~~~~~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~y~y~C~~- 91 (105)
T d2q5ba1 16 FEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGA-SKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAP- 91 (105)
T ss_dssp EESSEEEECTTEEEE--EEECSSCCEEEEECGGGSGGG-CHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECST-
T ss_pred EeCCEEEECCCCEEE--EEECCCCCceeEeecCccccc-ccccCCccccccccccCCceEEEEEEeccCCceEEEEeCC-
Confidence 444689999999865 567665555555543321110 000000 1 234578999999999987779999999974
Q ss_pred hhhhccceeEEEEec
Q 009127 133 FHKAAGAFGGIRIWS 147 (543)
Q Consensus 133 ~q~~~Gl~G~liV~~ 147 (543)
|...||.|.|+|+.
T Consensus 92 -H~~~GM~G~I~Veg 105 (105)
T d2q5ba1 92 -HRGAGMVGKITVEG 105 (105)
T ss_dssp -TGGGTCEEEEEECC
T ss_pred -CCCCCCEEEEEEcC
Confidence 77789999999974
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.44 E-value=8.4e-08 Score=85.14 Aligned_cols=97 Identities=11% Similarity=0.001 Sum_probs=68.6
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC---
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN--- 488 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn--- 488 (543)
+++.++.|+++.++|.|....++.||.||..+.....+....+.. .+.-.-...|+||++.+.+|.++.
T Consensus 60 P~Ira~~GD~i~V~f~N~~~~~~siH~HG~~~~~~~~~~~~~d~~--------~~~~~~~~~V~PGet~tY~w~v~~~~g 131 (180)
T d1sdda1 60 PTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHT--------LPMEKMDDAVAPGQEYTYEWIISEHSG 131 (180)
T ss_dssp CCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCC--------CHHHHTTTCBCTTCEEEEEEECCGGGS
T ss_pred CeEEEECCcEEeeEEEeCCCCCccccccccccccccccccccccC--------CCCCccccccCCCCEEEEEEEeCCccc
Confidence 468899999999999999888999999998653322111000000 000001114889999999999853
Q ss_pred -------cccceeeecchh--hhhcccEEEEEEecCC
Q 009127 489 -------VGMWNIRSENWA--RQYLGQQFYLRVYSPA 516 (543)
Q Consensus 489 -------pG~w~~HCHil~--Hed~GMm~~~~V~~p~ 516 (543)
.|.|+||||+.. |...||.+.+.|..+.
T Consensus 132 p~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~g 168 (180)
T d1sdda1 132 PTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKG 168 (180)
T ss_dssp CCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTT
T ss_pred CccCCCCCEEEEEecCCCcHHHhhCCceEEEEEccCC
Confidence 379999999744 7788999999997664
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=98.41 E-value=6.7e-08 Score=77.21 Aligned_cols=80 Identities=19% Similarity=0.297 Sum_probs=53.4
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC--C-CCCcCCCCCeEEEEEEeCCCcccceecCCch
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY--G-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL 132 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p--~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (543)
|-.+.|++++||+|++ .|.-...+++........ .|... . ....+.||++++|.| +++|+|+|+|..
T Consensus 16 F~P~~i~v~~GdtV~~--~n~~~~~H~~~~~~~~~~----~~~~~~~~~~~~~~~~g~t~~~tf---~~~G~y~Y~C~~- 85 (98)
T d1pcsa_ 16 FEPSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVP----ADTAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCEP- 85 (98)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEECCSSSC----HHHHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGG-
T ss_pred EeCCEEEECCCCEEEE--eECCCCccceEEeccccC----CCccccccccccccCCCcEEEEec---cCCceEEEEecc-
Confidence 4347999999998655 576555555544322110 01100 1 223468999888887 369999999954
Q ss_pred hhhhccceeEEEEe
Q 009127 133 FHKAAGAFGGIRIW 146 (543)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (543)
|...||.|.|+|+
T Consensus 86 -H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 86 -HRGAGMVGKVVVE 98 (98)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -CCCCCCEEEEEEC
Confidence 7778999999996
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.41 E-value=3.7e-07 Score=82.51 Aligned_cols=89 Identities=17% Similarity=0.087 Sum_probs=68.5
Q ss_pred CceEEEecCCEEEEEEEECC---CCCceeecCcccCCCCCCCCCCCC-CC----------CcCCCCCeEEEEEEeCCCcc
Q 009127 58 GPQIDAVTNDNLIISVYNYL---REPFLISWNGLQQRRNSWQDGVYG-TT----------CPIPPGKNFTYVLQAKDQIG 123 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l---~~~~~iH~HG~~~~~~~~~DG~p~-tq----------~~i~PG~~~~y~f~~~~~~G 123 (543)
+.++.+..+++++|.+.|.. ...+.+|.||.........+|... .. ..++||+...++|.+ +.+|
T Consensus 69 ~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~~~~~~g~~~~irf~a-dnpG 147 (199)
T d1gyca3 69 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQT-DNPG 147 (199)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEEC-CSCE
T ss_pred CceEEeccCceeEEEeecccccCCCceeeeecCCcEEEEeecCCCccCccCcccccceeeeccCCCcEEEEEEEC-CCCe
Confidence 44679999999999998864 356899999987653323333322 11 124799999999999 5799
Q ss_pred cceecCCchhhhhccceeEEEEec
Q 009127 124 SYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 124 t~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
.|.||||...+...||...|++.+
T Consensus 148 ~w~~HCHi~~H~~~GM~~~~~~~~ 171 (199)
T d1gyca3 148 PWFLHCHIDFHLEAGFAIVFAEDV 171 (199)
T ss_dssp EEEEEESSHHHHHTTCEEEEEETH
T ss_pred eEEEEcCchhhHhccCcEEEEEcC
Confidence 999999999999999999886655
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=98.33 E-value=4.2e-07 Score=72.51 Aligned_cols=84 Identities=17% Similarity=0.239 Sum_probs=54.3
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCC-CCCCCCCC-CCCcCCCCCeEEEEEEeCCCcccceecCCchh
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRN-SWQDGVYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLF 133 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~-~~~DG~p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~ 133 (543)
|-...|++++||+|+ ++|....++++.+........ ...++... ......||+++++.| +++|+|+|+|- .
T Consensus 14 F~P~~iti~~GdtV~--f~n~~~~~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~tF---~~~G~y~Y~C~--p 86 (99)
T d1plca_ 14 FVPSEFSISPGEKIV--FKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCS--P 86 (99)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECG--G
T ss_pred EeCCEEEECCCCEEE--EEECCCCCccEEEccCcCCCccccccCcccccccccCCCceEEEec---CCCceEEEEeC--C
Confidence 334699999999865 568765556655433221110 00000011 234467999888877 36999999994 5
Q ss_pred hhhccceeEEEEe
Q 009127 134 HKAAGAFGGIRIW 146 (543)
Q Consensus 134 q~~~Gl~G~liV~ 146 (543)
|...||.|.|+|.
T Consensus 87 H~~~GM~G~I~V~ 99 (99)
T d1plca_ 87 HQGAGMVGKVTVN 99 (99)
T ss_dssp GTTTTCEEEEEEC
T ss_pred CcCCCcEEEEEEC
Confidence 8889999999984
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=98.32 E-value=4.7e-07 Score=72.26 Aligned_cols=82 Identities=13% Similarity=0.197 Sum_probs=51.1
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCC-CCCC-CCCcCCCCCeEEEEEEeCCCcccceecCCchhhh
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQD-GVYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHK 135 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~D-G~p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 135 (543)
...|++++||+|+ +.|.....+++.+............ +... ......||+++++.| +++|+|||+|-. |.
T Consensus 16 P~~i~v~~GdtV~--f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tf---~~~G~y~y~C~~--H~ 88 (99)
T d1bypa_ 16 PSDLSIASGEKIT--FKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP--HA 88 (99)
T ss_dssp SSEEEECTTEEEE--EEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG--GT
T ss_pred CCEEEECCCCEEE--EEECCCCceeEEEecCCCCCccccccCcccccccccCCCceEEEEe---cCCceEEEEECc--CC
Confidence 4799999999865 5677655555444332211100000 0001 223456778777777 369999999964 77
Q ss_pred hccceeEEEEe
Q 009127 136 AAGAFGGIRIW 146 (543)
Q Consensus 136 ~~Gl~G~liV~ 146 (543)
..||.|.|+|.
T Consensus 89 ~~GM~G~I~V~ 99 (99)
T d1bypa_ 89 GAGMVGKVTVN 99 (99)
T ss_dssp TTTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 78999999983
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=98.32 E-value=7e-08 Score=77.71 Aligned_cols=79 Identities=14% Similarity=0.135 Sum_probs=46.8
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCC---------CCC-CCCcCCCCCeEEEEEEeCCCcccc
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDG---------VYG-TTCPIPPGKNFTYVLQAKDQIGSY 125 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG---------~p~-tq~~i~PG~~~~y~f~~~~~~Gt~ 125 (543)
|-.++|++++||+|+ ++|.-...+.+.+- ... ..++ ... ......+|+++++ +. +++|+|
T Consensus 14 F~P~~l~v~~GdtV~--f~n~~~~~h~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~f-~~~G~y 83 (102)
T d1kdja_ 14 FYPDSITVSAGEAVE--FTLVGETGHNIVFD---IPA--GAPGTVASELKAASMDENDLLSEDEPSFKA--KV-STPGTY 83 (102)
T ss_dssp EESSEEEECTTCCEE--EEECSSSCBCCEEC---CCT--TCCHHHHHHHHHTSCCTTCCBBTTBCEEEE--CC-CSCEEE
T ss_pred EeCCEEEECCCCEEE--EEECCCCceeEEEe---cCC--CCCcccccccccCcccccccccCCccEEEE--ee-CCCceE
Confidence 334799999999875 55664443332221 110 0110 000 1122345555544 44 479999
Q ss_pred eecCCchhhhhccceeEEEEe
Q 009127 126 FYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 126 wYH~H~~~q~~~Gl~G~liV~ 146 (543)
||+|.. |...||.|.|+|+
T Consensus 84 ~Y~C~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 84 TFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp EEECST--TGGGTCEEEEEEC
T ss_pred EEEecC--CcccCCeEEEEEC
Confidence 999975 7788999999996
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=98.29 E-value=1.2e-06 Score=72.63 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=50.6
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
.++|++++||+|++ .|.-...+..-..+. ..++.. .....+|++++|.| +.+|+|.|+|.. |...
T Consensus 20 P~~ltV~~GDTV~f--~n~d~~~h~~~~~~~------~~~~~~--~~~~~~~~~~~~tF---~~~G~Y~Y~C~p--H~~~ 84 (123)
T d1pmya_ 20 PALVRLKPGDSIKF--LPTDKGHNVETIKGM------APDGAD--YVKTTVGQEAVVKF---DKEGVYGFKCAP--HYMM 84 (123)
T ss_dssp SSEEEECTTCEEEE--ECSSSSCCCEECTTS------SCTTCC--CCBCCTTSCEEEEC---CSCEEEEEECST--TTTT
T ss_pred CCEEEECCCCEEEE--eeCCCCccccccccc------Cccccc--cccccccccccccc---CCCceEEEEecc--CCCC
Confidence 48999999999765 454322221111111 122221 24456788877777 468999999965 7778
Q ss_pred cceeEEEEecCC
Q 009127 138 GAFGGIRIWSRP 149 (543)
Q Consensus 138 Gl~G~liV~~~~ 149 (543)
||.|.|+|.++.
T Consensus 85 GM~G~I~Vgd~~ 96 (123)
T d1pmya_ 85 GMVALVVVGDKR 96 (123)
T ss_dssp TCEEEEEESSCC
T ss_pred CCEEEEEECCCC
Confidence 999999998754
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=98.28 E-value=4.4e-07 Score=72.26 Aligned_cols=84 Identities=17% Similarity=0.113 Sum_probs=51.4
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhh
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHK 135 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 135 (543)
|-..+|++++||+|+ +.|.....+.+.+..-........++.........|++++++.| +.+|+|||+|-. |.
T Consensus 15 F~P~~i~i~~GdtV~--f~n~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---~~~G~y~y~C~~--H~ 87 (98)
T d1iuza_ 15 FVPSKISVAAGEAIE--FVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP--HA 87 (98)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT--TG
T ss_pred EeCCEEEECCCCEEE--EEECCCCcccEEEeCCCcccccccccccccCcccCCCcEEEEec---CCCceEEEEeCC--Cc
Confidence 434699999999876 45665544444333221110000000000123467888777766 369999999964 77
Q ss_pred hccceeEEEEe
Q 009127 136 AAGAFGGIRIW 146 (543)
Q Consensus 136 ~~Gl~G~liV~ 146 (543)
..||.|.|+|+
T Consensus 88 ~~GM~G~I~Ve 98 (98)
T d1iuza_ 88 GAGMKMTITVQ 98 (98)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCeEEEEEC
Confidence 88999999996
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.24 E-value=5.7e-07 Score=81.38 Aligned_cols=101 Identities=14% Similarity=0.067 Sum_probs=68.3
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcc-
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVG- 490 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG- 490 (543)
+++.++.|++++++|.|....++.||.||..+.--..+. .+..... ....+...-.-.|.||+..+.+|.....+
T Consensus 86 P~Ira~~GD~v~V~~~N~~~~p~siH~HG~~~~~~~dg~-~~~~~~~---~~~~~~~~~~~~V~PGet~tY~w~v~~~~g 161 (207)
T d2j5wa3 86 PVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGT-YYSPNYN---PQSRSVPPSASHVAPTETFTYEWTVPKEVG 161 (207)
T ss_dssp CCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCSB-CCBCC----------CCCCSSCBCTTCEEEEEEECCGGGS
T ss_pred ceEEEECCCEEEEEEEECCCCCccccccccccCcccccc-cccCCCC---cccCCcCcccceecCCCEEEEEEEecCCCC
Confidence 568899999999999999888999999998764322211 1110000 00001111223478999999999975443
Q ss_pred ---------cceeeecchhhh--hcccEEEEEEecCC
Q 009127 491 ---------MWNIRSENWARQ--YLGQQFYLRVYSPA 516 (543)
Q Consensus 491 ---------~w~~HCHil~He--d~GMm~~~~V~~p~ 516 (543)
.|+||||+.... ..||.+.+.|..+.
T Consensus 162 P~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g 198 (207)
T d2j5wa3 162 PTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKG 198 (207)
T ss_dssp CCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTT
T ss_pred CccCCCCceeEEEccCCChhHhhccCceEEEEEccCC
Confidence 799999985544 67999999997664
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=98.24 E-value=7.6e-07 Score=69.73 Aligned_cols=76 Identities=22% Similarity=0.365 Sum_probs=53.3
Q ss_pred CCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhh
Q 009127 56 FPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHK 135 (543)
Q Consensus 56 ~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 135 (543)
|-.+.|++++||+|+ +.|.....+++...+.. ++.. ....+.||+++.|.| +.+|+|.|+|.. |.
T Consensus 16 F~P~~i~I~~GdtV~--f~n~d~~~h~~~~~~~~-------~~~~-~~~~~~~g~~~~~tF---~~~G~y~Y~C~~--H~ 80 (91)
T d1bxua_ 16 FEPSTIEIQAGDTVQ--WVNNKLAPHNVVVEGQP-------ELSH-KDLAFSPGETFEATF---SEPGTYTYYCEP--HR 80 (91)
T ss_dssp EESSEEEECTTCEEE--EEECSSCCEEEEETTCG-------GGCE-EEEECSTTCEEEEEC---CSCEEEEEECTT--TG
T ss_pred EECCEEEECCCCEEE--EEECCcCCceEEecccc-------cccc-cccccCCCCCEEEEe---ccCceEEEEeCC--CC
Confidence 334899999999865 67876665555544321 1100 123467999988877 369999999964 66
Q ss_pred hccceeEEEEe
Q 009127 136 AAGAFGGIRIW 146 (543)
Q Consensus 136 ~~Gl~G~liV~ 146 (543)
..||.|.|+|+
T Consensus 81 ~~gM~G~I~Ve 91 (91)
T d1bxua_ 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 67999999996
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=98.19 E-value=2.3e-06 Score=68.83 Aligned_cols=76 Identities=12% Similarity=0.140 Sum_probs=54.4
Q ss_pred cCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCC-CCCcCCCCCeEEEEEEeCCCcccceecCCchh
Q 009127 55 QFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYG-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLF 133 (543)
Q Consensus 55 ~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~ 133 (543)
+|-.++|++++||+|. ++|+-...+++++..- .+|... ....+.||++++|.| +++|+|.|+|-.+
T Consensus 29 ~F~P~~i~V~~GdtV~--f~N~d~~~H~v~~~~~-------~~~~~~~~~~~~~~g~~~~~tf---~~pG~y~y~C~~H- 95 (105)
T d2ov0a1 29 KYETPELHVKVGDTVT--WINREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPH- 95 (105)
T ss_dssp EESSSEEEECTTCEEE--EEECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC-
T ss_pred EEeCCEEEECCCCEEE--EEECCCCceeEEEecc-------cCCcccccccccCCCceEEEEe---cCCeEEEEEecCC-
Confidence 4555799999999865 5788666666654332 112222 345578999988888 3699999999542
Q ss_pred hhhccceeEEEEe
Q 009127 134 HKAAGAFGGIRIW 146 (543)
Q Consensus 134 q~~~Gl~G~liV~ 146 (543)
.||.|.|+|+
T Consensus 96 ---~~M~G~I~Ve 105 (105)
T d2ov0a1 96 ---PFMRGKVVVE 105 (105)
T ss_dssp ---TTCEEEEEEC
T ss_pred ---CCCEEEEEEC
Confidence 4899999986
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=98.14 E-value=7e-07 Score=72.03 Aligned_cols=80 Identities=16% Similarity=0.277 Sum_probs=55.7
Q ss_pred ceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC------C-CCCcCCCCCeEEEEEEeCCCcccceecCCc
Q 009127 59 PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY------G-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSF 131 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p------~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~ 131 (543)
..|++++||+|+ +.|.....+........ ..++.. . ......|++++++.|.++.++|+|||+|-.
T Consensus 19 ~~i~v~~GdtV~--f~n~~~~~h~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T d2cj3a1 19 AKLTIKPGDTVE--FLNNKVPPHNVVFDAAL-----NPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEP 91 (105)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECSSS-----STTCCHHHHHHHCEEEEECSTTCEEEEECCTTCCSEEEEEECTT
T ss_pred CEEEECCCCEEE--EEECCCCceeeEeccCC-----CCccccccCCcccccccccCCCcceEEEEEeccCCceEEEEeCC
Confidence 599999999865 56765554443332211 111111 0 123478999999999987779999999964
Q ss_pred hhhhhccceeEEEEec
Q 009127 132 LFHKAAGAFGGIRIWS 147 (543)
Q Consensus 132 ~~q~~~Gl~G~liV~~ 147 (543)
|...||.|.|+|+.
T Consensus 92 --H~~~GM~G~I~V~g 105 (105)
T d2cj3a1 92 --HRGAGMVGKITVAG 105 (105)
T ss_dssp --TGGGTCEEEEEECC
T ss_pred --CcCCCcEEEEEEeC
Confidence 88889999999973
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.11 E-value=5e-06 Score=69.09 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=64.8
Q ss_pred cCCCceEEE-ecCCEEEEEEEECCCCCceeecCc--cc-------------------CCCCCCCCCCCCCCCcCCCCCeE
Q 009127 55 QFPGPQIDA-VTNDNLIISVYNYLREPFLISWNG--LQ-------------------QRRNSWQDGVYGTTCPIPPGKNF 112 (543)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~~~iH~HG--~~-------------------~~~~~~~DG~p~tq~~i~PG~~~ 112 (543)
+|--..|.| +.|++|+|+|+|....++++=.|- +. ....+.++.+......|.||++.
T Consensus 14 ~Fd~~~i~V~k~Ge~v~l~~~N~g~~pH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~ 93 (128)
T d1jzga_ 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred cCccceEEEecCCCEEEEEEEeCCccchheeecCcccccchhHHHHHHHHHhhhhccccCCCCccchhhcccccCCCceE
Confidence 344579999 589999999999976543322221 10 00112233333233669999999
Q ss_pred EEEEEeC--CCcccceecCCchhhhhccceeEEEEe
Q 009127 113 TYVLQAK--DQIGSYFYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 113 ~y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (543)
+..|+++ +++|+|-|-|-...|. .||.|.|+|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 94 SVTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 9999997 5799999999888887 7999999995
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=98.10 E-value=6.1e-06 Score=68.74 Aligned_cols=92 Identities=13% Similarity=0.085 Sum_probs=63.5
Q ss_pred cCCCceEEEecC-CEEEEEEEECCCCCceeecCccc--CC-------------------CCCCCCCCCCCCCcCCCCCeE
Q 009127 55 QFPGPQIDAVTN-DNLIISVYNYLREPFLISWNGLQ--QR-------------------RNSWQDGVYGTTCPIPPGKNF 112 (543)
Q Consensus 55 ~~pgP~i~v~~G-d~v~i~~~N~l~~~~~iH~HG~~--~~-------------------~~~~~DG~p~tq~~i~PG~~~ 112 (543)
+|--..|.|++| ++|+|+|+|....++.+=.|-+. .. ..+.++.+......|.||++.
T Consensus 14 ~fd~~~i~V~aG~e~v~i~~~N~g~lph~~~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~ 93 (129)
T d1cuoa_ 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred cCcccEEEEeCCCEEEEEEEEeCCcCCceeEEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhhhhccccCccccc
Confidence 454579999999 79999999997654222111110 00 011122221123568999999
Q ss_pred EEEEEeC--CCcccceecCCchhhhhccceeEEEEec
Q 009127 113 TYVLQAK--DQIGSYFYFPSFLFHKAAGAFGGIRIWS 147 (543)
Q Consensus 113 ~y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 147 (543)
+..|+++ .++|+|.|-|-...|. .||.|.|+|++
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 94 SVKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred eEEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 9999986 3599999999887786 69999999974
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=98.10 E-value=5.2e-06 Score=69.22 Aligned_cols=91 Identities=16% Similarity=0.098 Sum_probs=62.4
Q ss_pred cCCCceEEE-ecCCEEEEEEEECCCCCceeecCcccC--------------------CC-CCCCCCCCCCCCcCCCCCeE
Q 009127 55 QFPGPQIDA-VTNDNLIISVYNYLREPFLISWNGLQQ--------------------RR-NSWQDGVYGTTCPIPPGKNF 112 (543)
Q Consensus 55 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~~~iH~HG~~~--------------------~~-~~~~DG~p~tq~~i~PG~~~ 112 (543)
+|---+|.| +.|++|+|+|+|.-..++.+=.|-+.. .. .+..+.+......|.||++.
T Consensus 14 kf~~~~i~V~k~G~~V~l~~~N~g~l~h~~m~hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~ 93 (129)
T d2ccwa1 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cCccceEEEecCCCEEEEEEEcCCcCchheeeccccccCcccHHHHHHHHHHhhhccccCCCccccccccccccCCCceE
Confidence 354568999 689999999999965442222222110 00 01111111133568999999
Q ss_pred EEEEEeC--CCcccceecCCchhhhhccceeEEEEe
Q 009127 113 TYVLQAK--DQIGSYFYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 113 ~y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (543)
+..|+++ .++|+|+|-|-...|. .||.|.|.|.
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 94 SVTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 9999997 4799999999988886 7999999984
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=98.08 E-value=4e-06 Score=69.45 Aligned_cols=77 Identities=12% Similarity=0.055 Sum_probs=50.8
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
...|++++||+|++. |.-...+..-.++. ...+. ......++++|+|.| +.+|+|+|+|-. |...
T Consensus 20 P~~itI~~GdtV~f~--n~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~tF---~~~G~Y~Y~C~p--H~~~ 84 (123)
T d1adwa_ 20 PAFVRAEPGDVINFV--PTDKSHNVEAIKEI-----LPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTP--HFGM 84 (123)
T ss_dssp SSEEEECTTEEEEEE--ESSSSCCCEECTTS-----CCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGG--GGGG
T ss_pred CCEEEECCCCEEEEE--eCCCCcceecccCc-----ccccc---ccccccCCcceEEec---cCCCeEEEEEcc--CCCC
Confidence 379999999997764 54332222111111 11111 224567788888887 469999999964 7778
Q ss_pred cceeEEEEecCC
Q 009127 138 GAFGGIRIWSRP 149 (543)
Q Consensus 138 Gl~G~liV~~~~ 149 (543)
||.|.|+|.++.
T Consensus 85 GM~G~I~Vg~~~ 96 (123)
T d1adwa_ 85 GMVGLVQVGDAP 96 (123)
T ss_dssp TCEEEEEESSSC
T ss_pred CCEEEEEECCCC
Confidence 999999998754
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=98.05 E-value=1.3e-05 Score=73.00 Aligned_cols=78 Identities=8% Similarity=0.115 Sum_probs=60.1
Q ss_pred eEEEecCCEEEEEEEEcCC----cceEEEEEeCCeeEEEEEcCcc---------------------ccccccCeEEEcCC
Q 009127 204 TFTVEPGRTYRFRISNVGL----TTSINFRIQGHSMKLVEVEGSH---------------------TLQNTYAALDIHLG 258 (543)
Q Consensus 204 ~~~v~~G~~~rlRiiN~~~----~~~~~~~i~g~~~~via~DG~~---------------------~~p~~~~~v~l~pg 258 (543)
...+...+.+++.+++... ...|+||||||.|+|++..+.. ..|...|++.+.||
T Consensus 62 ~~~~~~~~~~~~~~i~~~~~n~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~ 141 (216)
T d2q9oa3 62 IVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAG 141 (216)
T ss_dssp EEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTT
T ss_pred eeeccccccceeEEEEeccCCccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCC
Confidence 3455555556666554432 2369999999999999986542 24677899999999
Q ss_pred CeEEEEEEeCCCCcceEEEEeecc
Q 009127 259 QTYSVLVTMDQAPQDYYIVVSSRF 282 (543)
Q Consensus 259 eR~dv~v~~~~~~g~y~i~~~~~~ 282 (543)
+.+.|.++++ .||.|.++|+...
T Consensus 142 g~~~ir~~ad-npG~Wl~HCHi~~ 164 (216)
T d2q9oa3 142 GWLLLAFRTD-NPGAWLFHCHIAW 164 (216)
T ss_dssp SEEEEEEECC-SCEEEEEEECCHH
T ss_pred CEEEEEEECC-CCeEEEEEccCCc
Confidence 9999999998 7999999998753
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.02 E-value=8.6e-06 Score=67.96 Aligned_cols=75 Identities=7% Similarity=0.069 Sum_probs=57.3
Q ss_pred EEecCCCcEEEEEEEeCCCC---CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCc
Q 009127 413 VMAANFREFVEIVFQNWEDT---VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNV 489 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~---~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnp 489 (543)
.+.++.|+.|.+.+.|.... .|.|++.+..+. ..+.||...++.|++++|
T Consensus 52 ~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~v~---------------------------~~~~PG~t~~~~f~~~~~ 104 (131)
T d1qnia1 52 DFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHGVS---------------------------MEISPQQTASVTFTAGKP 104 (131)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCSS
T ss_pred eEEecCCCEEEEEEEccCCCCcceEEEEEeccCcc---------------------------cccCCCceEEEEEEcCCC
Confidence 36789999999999997543 466665443211 235688999999999999
Q ss_pred ccceeeecchhhh-hcccEEEEEEec
Q 009127 490 GMWNIRSENWARQ-YLGQQFYLRVYS 514 (543)
Q Consensus 490 G~w~~HCHil~He-d~GMm~~~~V~~ 514 (543)
|.|.+||+..-|. +.+|.+.+.|+.
T Consensus 105 G~y~~~C~~~cg~~H~~M~g~i~Vep 130 (131)
T d1qnia1 105 GVYWYYCNWFCHALHMEMVGRMLVEA 130 (131)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred EEEEEECccccCcchhcCeeEEEEEe
Confidence 9999999986665 578999998863
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=98.01 E-value=5.2e-06 Score=68.58 Aligned_cols=76 Identities=12% Similarity=0.080 Sum_probs=49.0
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
...|++++||+|.. +|... .+..|.... . ..+|. ......++++++|.| +.+|+|.|+|.. |...
T Consensus 20 P~~itI~~GdTV~w--~n~~~-~~~~~~~~~--~---~p~~~--~~~~~~~~~~~s~Tf---~~~G~Y~Y~C~p--H~~~ 84 (124)
T d1bqka_ 20 PASLKVAPGDTVTF--IPTDK-GHNVETIKG--M---IPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTP--HYGM 84 (124)
T ss_dssp SSEEEECTTCEEEE--ECSSS-SCCCEECTT--C---SCTTC--CCCBCCTTCCEEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCeEEE--EECCC-Ccccccccc--c---CCCcc--ccccccCCccEEEec---CCCceEEEEecc--CcCC
Confidence 37899999999655 55422 222222111 1 11221 124567788887777 368999999964 6777
Q ss_pred cceeEEEEecC
Q 009127 138 GAFGGIRIWSR 148 (543)
Q Consensus 138 Gl~G~liV~~~ 148 (543)
||.|.|+|.+.
T Consensus 85 GM~G~IvVgd~ 95 (124)
T d1bqka_ 85 GMVGVVQVGDA 95 (124)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEECCC
Confidence 99999999864
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=98.01 E-value=3.7e-06 Score=66.57 Aligned_cols=76 Identities=18% Similarity=0.313 Sum_probs=45.7
Q ss_pred ceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCC--C-CCCcCCCCCeEEEEEEeCCCcccceecCCchhhh
Q 009127 59 PQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVY--G-TTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHK 135 (543)
Q Consensus 59 P~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p--~-tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~ 135 (543)
.+|++++||+|++. |.....+...+ .... ...+.+ . ......+++++++.| +.+|+|+|+|-. |.
T Consensus 19 ~~i~V~~GdtV~f~--~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~tf---~~~G~y~Y~C~~--H~ 86 (97)
T d2jxma1 19 KALSISAGDTVEFV--MNKVGPHNVIF----DKVP-AGESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTP--HR 86 (97)
T ss_dssp SEEEECTTCEEEEE--ECSSCCCCBEE----EECC-TTSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSS--TT
T ss_pred CEEEECCCCEEEEE--ECCCcceeEEE----ecCC-CccccccccccccccCcceEEEEec---CCCeEEEEEEcc--CC
Confidence 69999999998765 44322221111 0100 011111 1 123456677666665 469999999954 66
Q ss_pred hccceeEEEEe
Q 009127 136 AAGAFGGIRIW 146 (543)
Q Consensus 136 ~~Gl~G~liV~ 146 (543)
..||.|.|+|+
T Consensus 87 ~~GM~G~I~Ve 97 (97)
T d2jxma1 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 77999999996
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.95 E-value=6.3e-06 Score=72.15 Aligned_cols=79 Identities=20% Similarity=0.182 Sum_probs=62.1
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcc-
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVG- 490 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG- 490 (543)
+++.++.|+++.++|.|....++.||.||... ... . |. .|+||+..+-+|.+...+
T Consensus 86 P~IraevGD~i~V~f~N~a~~p~SiH~HGv~~----------~~~------~------~~-~v~PGet~tY~w~v~~~~g 142 (179)
T d2j5wa4 86 PQLHADVGDKVKIIFKNMATRPYSIHAHGVQT----------ESS------T------VT-PTLPGETLTYVWKIPERSG 142 (179)
T ss_dssp CCEEEETTEEEEEEEEECSSSCBCCEESSCBC----------SCS------C------CC-CBCTTCEEEEEEECCGGGS
T ss_pred CeEEEECCCEEEEEEEeCCCCCEeEeeccccC----------CCC------C------CC-cccCCccEEEEEEecCccC
Confidence 56889999999999999988999999999742 000 0 11 267899999999875432
Q ss_pred ---------cceeeecchh--hhhcccEEEEEEe
Q 009127 491 ---------MWNIRSENWA--RQYLGQQFYLRVY 513 (543)
Q Consensus 491 ---------~w~~HCHil~--Hed~GMm~~~~V~ 513 (543)
.|+||||+.. |...||.+.+.|-
T Consensus 143 p~~~d~~c~t~~YHShv~~~~d~~sGL~GplIVc 176 (179)
T d2j5wa4 143 AGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVC 176 (179)
T ss_dssp CCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEE
T ss_pred CccCCCCceeEEEecCCCcHHHhhCCCeEEEEEE
Confidence 7999999954 6678999999884
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=97.95 E-value=9.8e-06 Score=66.48 Aligned_cols=77 Identities=17% Similarity=0.122 Sum_probs=49.9
Q ss_pred CceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCchhhhhc
Q 009127 58 GPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAA 137 (543)
Q Consensus 58 gP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~~q~~~ 137 (543)
...|++++||+|.. .|.. ..++++.-.- ...+|.. .....+++++++.| +.+|+|.|+|.. |...
T Consensus 20 P~~itI~~GDTV~f--~n~~-~~Hnv~~~~~-----~~~~~~~--~~~~~~~~~~s~tF---~~~G~y~Y~Ctp--H~~~ 84 (120)
T d1paza_ 20 PAYIKANPGDTVTF--IPVD-KGHNVESIKD-----MIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCTP--HYAM 84 (120)
T ss_dssp SSEEEECTTCEEEE--EESS-SSCCCEECTT-----CSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECTT--TGGG
T ss_pred CCEEEECCCCEEEE--eeCC-CcceEeeccc-----cCccccc--ccccccCceEEEEe---cCCCeEEEEEee--CCCC
Confidence 47999999999755 4542 2333332111 1122221 13345677777777 468999999964 7778
Q ss_pred cceeEEEEecCC
Q 009127 138 GAFGGIRIWSRP 149 (543)
Q Consensus 138 Gl~G~liV~~~~ 149 (543)
||.|.|+|.++.
T Consensus 85 GM~G~I~Vg~~~ 96 (120)
T d1paza_ 85 GMIALIAVGDSP 96 (120)
T ss_dssp TCEEEEEESSSC
T ss_pred CCEEEEEECCCC
Confidence 999999999753
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=97.94 E-value=1.4e-05 Score=66.28 Aligned_cols=91 Identities=16% Similarity=0.110 Sum_probs=63.7
Q ss_pred cCCCceEEEe-cCCEEEEEEEECCCCCceeecCcc--------------------cCCCCCCCCC-CCCCCCcCCCCCeE
Q 009127 55 QFPGPQIDAV-TNDNLIISVYNYLREPFLISWNGL--------------------QQRRNSWQDG-VYGTTCPIPPGKNF 112 (543)
Q Consensus 55 ~~pgP~i~v~-~Gd~v~i~~~N~l~~~~~iH~HG~--------------------~~~~~~~~DG-~p~tq~~i~PG~~~ 112 (543)
+|--.+|.|+ .|++|+|+|+|.-.-++.+=.|-+ .....+.+|. +......|.||++.
T Consensus 14 ~fd~~~i~V~~~ge~v~i~~~N~g~~pH~~~~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~ 93 (128)
T d1nwpa_ 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cCcCCeEEEecCCcEEEEEEEeCCccccceeeecccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCce
Confidence 3545789996 599999999999665544322221 1111112222 11123568999999
Q ss_pred EEEEEeC--CCcccceecCCchhhhhccceeEEEEe
Q 009127 113 TYVLQAK--DQIGSYFYFPSFLFHKAAGAFGGIRIW 146 (543)
Q Consensus 113 ~y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 146 (543)
+..|+++ .++|+|-|-|-...|+ .||.|.|+|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 94 SVTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEEEEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 9999997 4689999999988887 7999999985
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=97.89 E-value=2.8e-05 Score=62.39 Aligned_cols=79 Identities=13% Similarity=0.177 Sum_probs=52.6
Q ss_pred CCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCcccceecCCch
Q 009127 53 NGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFL 132 (543)
Q Consensus 53 Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~Gt~wYH~H~~ 132 (543)
|-.|-.+.|.+++||+| ++.|.-..++++........ .++ . ....+.||++++|.| +++|+|.|+|-.+
T Consensus 28 ~~~F~P~~i~V~~GdtV--~f~N~d~~~H~v~~~~~~~~----~~~-f-~s~~~~~~~~~~~tf---~~~G~y~y~C~~H 96 (106)
T d1id2a_ 28 KMKYLTPEVTIKAGETV--YWVNGEVMPHNVAFKKGIVG----EDA-F-RGEMMTKDQAYAITF---NEAGSYDYFCTPH 96 (106)
T ss_dssp TTEESSSEEEECTTCEE--EEEECSSSCBCCEECTTTSS----SSC-E-ECCCBCTTEEEEEEE---CSCEEEEEECSSC
T ss_pred cCEEeCCEEEECCCCEE--EEEECCCCceeEEeccccCC----ccc-c-cccccCCCceEEEec---CCCeEEEEEccCC
Confidence 44565579999999986 56787655555443221110 111 1 223467899888877 3699999999653
Q ss_pred hhhhccceeEEEEe
Q 009127 133 FHKAAGAFGGIRIW 146 (543)
Q Consensus 133 ~q~~~Gl~G~liV~ 146 (543)
.||.|.|+|+
T Consensus 97 ----~~M~G~I~Ve 106 (106)
T d1id2a_ 97 ----PFMRGKVIVE 106 (106)
T ss_dssp ----TTCEEEEEEC
T ss_pred ----CCCEEEEEEC
Confidence 4899999985
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.85 E-value=3.8e-05 Score=63.03 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=62.2
Q ss_pred CCeeEEEEEECCcCCCceEEEecCCEEEEEEEECCCCCceeecCcccCCCCCCCCCCCCCCCcCCCCCeEEEEEEeCCCc
Q 009127 43 LGVKQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQI 122 (543)
Q Consensus 43 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~p~tq~~i~PG~~~~y~f~~~~~~ 122 (543)
+.....+...+-.|-...|.++.|++|+++++|.. -. ||+.... . | .+..+.||++.+..|++ +++
T Consensus 31 ~~~~v~v~a~~~~f~p~~l~vp~G~~V~~~lts~D-V~-----H~f~ip~---~-~---v~~d~~PG~~~~~~~~~-~~~ 96 (122)
T d2cuaa_ 31 NQYTVYVLAFAFGYQPNPIEVPQGAEIVFKITSPD-VI-----HGFHVEG---T-N---INVEVLPGEVSTVRYTF-KRP 96 (122)
T ss_dssp TEEEEEEEEETTEEESSSEEEETTSEEEEEEEBSS-SC-----EEEEETT---S-S---CEEEECBTBCEEEEEEC-CSC
T ss_pred CeEEEEEEEEeccccCCEEEEeCCCEEEEEEEcCC-cc-----ceeEecC---C-C---eeEEEecCceEEEEEEe-ccc
Confidence 33444555555555446899999999999999973 22 4443211 1 1 12456799999999998 589
Q ss_pred ccceecCCc--h-hhhhccceeEEEEec
Q 009127 123 GSYFYFPSF--L-FHKAAGAFGGIRIWS 147 (543)
Q Consensus 123 Gt~wYH~H~--~-~q~~~Gl~G~liV~~ 147 (543)
|+|+|.|+. + .| .+|.|.|+|++
T Consensus 97 G~y~~~C~~~CG~~H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 97 GEYRIICNQYCGLGH--QNMFGTIVVKE 122 (122)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEEC
T ss_pred eeEEEEehhccCCCc--ccCeEEEEEEC
Confidence 999999983 2 33 47999999975
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.72 E-value=7.3e-05 Score=64.06 Aligned_cols=94 Identities=14% Similarity=0.052 Sum_probs=74.0
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcce--eEEeCCCCEEEEEEEecCc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARS--TTQVYPRSWTAIYMALDNV 489 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rD--Tv~vp~~g~v~irf~adnp 489 (543)
+.++++.|++|. ++.+.....-.||+-|-+|-.|-..+ .+ .+++.++ |+.|++++-..+.|++..|
T Consensus 70 ~aL~AkvGEtV~-~~~~gpN~~SsfHvIGg~~D~V~~~G-~~----------~n~p~~~~qT~~v~~G~a~~~~~tf~~P 137 (178)
T d1mzya2 70 GALKAKVGDNVL-FVHSQPNRDSRPHLIGGHGDLVWETG-KF----------HNAPERDLETWFIRGGTAGAALYKFLQP 137 (178)
T ss_dssp GCEEEETTCEEE-EEEEESSSCBCEEEETCCEEEEETTC-CT----------TSCCEEEESBCCBCTTEEEEEEEECCSC
T ss_pred CCcccccCCeEE-EecccCCCCCCcccccCccceEccCC-cc----------CCCCCCCceEEEecCCceeEEEEEeCCC
Confidence 346788999984 34544456779999999997665432 22 3455554 8999999999999999999
Q ss_pred ccceeeecchhh-hhcccEEEEEEecCCC
Q 009127 490 GMWNIRSENWAR-QYLGQQFYLRVYSPAN 517 (543)
Q Consensus 490 G~w~~HCHil~H-ed~GMm~~~~V~~p~~ 517 (543)
|.+.|--|.+.. .+.|.++.+.|+.+++
T Consensus 138 G~Y~~VdH~l~~A~~kGA~g~l~V~G~~~ 166 (178)
T d1mzya2 138 GVYAYVNHNLIEAVHKGATAHVLVEGEWD 166 (178)
T ss_dssp EEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred eEEEEEccHHHHHHhCCCeEEEEeCCCCC
Confidence 999999999865 6999999999986654
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=97.62 E-value=8.4e-05 Score=64.53 Aligned_cols=74 Identities=15% Similarity=0.236 Sum_probs=61.0
Q ss_pred eEEecCCCcEEEEEEEeCCCC-CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC-c
Q 009127 412 SVMAANFREFVEIVFQNWEDT-VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN-V 489 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn-p 489 (543)
.+++++.|++++|.|+|.+.. .+.|||+||+|.||+.++... .|...|++.|.+|+.+.+.++++. +
T Consensus 55 ~~~~v~~g~~~rlRlina~~~~~~~~~id~H~~~Via~DG~~v-----------~P~~~d~i~i~~GqR~dvlv~~~~~~ 123 (168)
T d1v10a2 55 AVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSH-----------QPLTVDSLTIFAGQRYSVVVEANQAV 123 (168)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE-----------EEEEESBEEECTTCEEEEEEECCSCS
T ss_pred eEEEECCCCEEEEEEEecccCceEEEEECCCeEEEEEeCCeec-----------CceEEeEEEEccCceEEEEEECCCCC
Confidence 457889999999999999755 588999999999999876422 366789999999999999999975 6
Q ss_pred ccceeee
Q 009127 490 GMWNIRS 496 (543)
Q Consensus 490 G~w~~HC 496 (543)
|.|-++-
T Consensus 124 ~~y~ira 130 (168)
T d1v10a2 124 GNYWIRA 130 (168)
T ss_dssp SEEEEEE
T ss_pred CcEEEEE
Confidence 7654443
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=97.58 E-value=4.7e-05 Score=67.26 Aligned_cols=93 Identities=11% Similarity=-0.002 Sum_probs=59.7
Q ss_pred EEecCCCcEEEEEEEeCCCC----------------------CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcce
Q 009127 413 VMAANFREFVEIVFQNWEDT----------------------VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARS 470 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~----------------------~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rD 470 (543)
++.++.|+.+++.+.|.-.. ...+|+||-+.- ....|. +. .....+
T Consensus 58 tI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~--~~~DG~--~~--------~~~~~~ 125 (181)
T d1gska1 58 TIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGY--PE--------AWFSKD 125 (181)
T ss_dssp BEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCCC--GGGSCC--TT--------SCBCGG
T ss_pred eEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeeccccC--CccCCC--cc--------cccccC
Confidence 36778999999999996322 235999996521 111110 00 000011
Q ss_pred e-EEeCCCCEEEEEEEecCc-ccceeeecch----hhhhcccEEEEEEecCCC
Q 009127 471 T-TQVYPRSWTAIYMALDNV-GMWNIRSENW----ARQYLGQQFYLRVYSPAN 517 (543)
Q Consensus 471 T-v~vp~~g~v~irf~adnp-G~w~~HCHil----~Hed~GMm~~~~V~~p~~ 517 (543)
. -..+.+.+.+.+|.++.+ |.|.||||.. .|..+||.+.+.|.++++
T Consensus 126 ~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~~~ 178 (181)
T d1gska1 126 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 178 (181)
T ss_dssp GSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred cccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCccc
Confidence 1 123345667788888875 8889999973 588899999999987764
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.56 E-value=4.2e-05 Score=67.35 Aligned_cols=83 Identities=17% Similarity=0.209 Sum_probs=66.0
Q ss_pred EEEEECCc--------CCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeEE
Q 009127 48 QGILINGQ--------FPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNFT 113 (543)
Q Consensus 48 ~~~~~Ng~--------~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~~ 113 (543)
..+++||+ -+...+.+++|++.++||.|... ....++++|..+.. .+.||.+. ....|.|||+++
T Consensus 34 d~~LINGkg~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~id~h~~~v-ia~DG~~v~P~~~~~~~i~~GqRyd 112 (181)
T d2q9oa2 34 DNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRYD 112 (181)
T ss_dssp SEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEE
T ss_pred ceEEECCcCCCCCCCCCcceEEEECCCCEEEEEEecccCCccEEEEECCceEEE-EEeCCeEccceEeCEEEecCCcEEE
Confidence 45688885 24568999999999999999964 45678888876543 47899874 345699999999
Q ss_pred EEEEeCCCcccceecCCc
Q 009127 114 YVLQAKDQIGSYFYFPSF 131 (543)
Q Consensus 114 y~f~~~~~~Gt~wYH~H~ 131 (543)
.-+++.+.+|.||-....
T Consensus 113 vlv~a~~~~~~Y~ir~~~ 130 (181)
T d2q9oa2 113 VVIDASRAPDNYWFNVTF 130 (181)
T ss_dssp EEEECCSCSSEEEEEEEC
T ss_pred EEEeCCCCCccEEEEEec
Confidence 999996668999988764
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=97.56 E-value=4.7e-05 Score=66.47 Aligned_cols=83 Identities=17% Similarity=0.261 Sum_probs=65.0
Q ss_pred EEEEEECCc--------CCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeE
Q 009127 47 QQGILINGQ--------FPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNF 112 (543)
Q Consensus 47 ~~~~~~Ng~--------~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~ 112 (543)
-...++||+ -+.++|.+++|+++++|+.|... ....+++.|..+.. ..+||++. ....|.|||++
T Consensus 34 pd~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~~H~~~v-ia~DG~~v~P~~~~~l~i~~gqR~ 112 (172)
T d1hfua2 34 PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRY 112 (172)
T ss_dssp CSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CCcEEECccCccCCCCCCCceEEEECCCCEEEEEEeeecCCceEEEEeCCCeEEE-EEeCCEEcccEEeceEeccCCeEE
Confidence 355678885 35689999999999999999864 45667777765543 46899873 34569999999
Q ss_pred EEEEEeCCCcccceecCC
Q 009127 113 TYVLQAKDQIGSYFYFPS 130 (543)
Q Consensus 113 ~y~f~~~~~~Gt~wYH~H 130 (543)
+.-+++.+..|.||....
T Consensus 113 dvlv~~~~~~~~Y~ira~ 130 (172)
T d1hfua2 113 SFVLDANQPVDNYWIRAQ 130 (172)
T ss_dssp EEEEECCSCSSEEEEEEE
T ss_pred EEEEEcCCCCCcEEEEEE
Confidence 999999655899999875
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=97.50 E-value=0.00011 Score=64.01 Aligned_cols=82 Identities=18% Similarity=0.287 Sum_probs=64.4
Q ss_pred EEEEECCc--------CCCceEEEecCCEEEEEEEECCC-CCceeecCcccCCCCCCCCCCCC-----CCCcCCCCCeEE
Q 009127 48 QGILINGQ--------FPGPQIDAVTNDNLIISVYNYLR-EPFLISWNGLQQRRNSWQDGVYG-----TTCPIPPGKNFT 113 (543)
Q Consensus 48 ~~~~~Ng~--------~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~p~-----tq~~i~PG~~~~ 113 (543)
....+||. -+.+++.|++|+++++|+.|... ....++.+|..+.. ...||++. .+..|.|||+++
T Consensus 37 d~~liNG~g~~~~~~~~~~~~~~v~~g~~~rlRlIN~~~~~~~~~~id~h~~~v-ia~DG~~v~P~~~d~l~i~~gqRyd 115 (170)
T d1gyca2 37 DATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTV-IEVDGINSQPLLVDSIQIFAAQRYS 115 (170)
T ss_dssp SEEEETTBCCBTTCTTSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEE
T ss_pred CcccccCccccCCCCCCCceEEEECCCCEEEEEEeecCCCceeeEEeCCCeEEE-EEeCCeeccceEeeEEEecCCeEEE
Confidence 34677764 34579999999999999999964 56677777766543 47899873 346699999999
Q ss_pred EEEEeCCCcccceecCC
Q 009127 114 YVLQAKDQIGSYFYFPS 130 (543)
Q Consensus 114 y~f~~~~~~Gt~wYH~H 130 (543)
.-+++.+.+|.||-+..
T Consensus 116 vlv~~~~~~~~y~ira~ 132 (170)
T d1gyca2 116 FVLNANQTVGNYWIRAN 132 (170)
T ss_dssp EEEECCSCSSEEEEEEE
T ss_pred EEEeCCCCCCcEEEEEe
Confidence 99999655899999865
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=97.28 E-value=0.00012 Score=57.51 Aligned_cols=80 Identities=13% Similarity=-0.020 Sum_probs=50.2
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
..++++.|++|.|+ |.+...|-+..+... ...+. .....-+...+.++... .++++.||.
T Consensus 19 ~~i~v~~GdtV~~~--n~~~~~H~~~~~~~~--------~~~~~--------~~~~~~~~~~~~~g~t~--~~tf~~~G~ 78 (98)
T d1pcsa_ 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADG--------VPADT--------AAKLSHKGLLFAAGESF--TSTFTEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSS--------SCHHH--------HHHHCEEEEECSTTCEE--EEECCSCEE
T ss_pred CEEEECCCCEEEEe--ECCCCccceEEeccc--------cCCCc--------cccccccccccCCCcEE--EEeccCCce
Confidence 35788999999987 555555643332110 00000 00012244556666644 446689999
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.|||.. |...||.+.+.|+
T Consensus 79 y~Y~C~~--H~~~gM~G~I~Ve 98 (98)
T d1pcsa_ 79 YTYYCEP--HRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEecc--CCCCCCEEEEEEC
Confidence 9999976 9999999999884
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=97.22 E-value=7.1e-05 Score=59.72 Aligned_cols=84 Identities=14% Similarity=0.034 Sum_probs=57.9
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEe-cCccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMAL-DNVGM 491 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~a-dnpG~ 491 (543)
.++++.|++|.|+ |.+...|..++....+.. +. .........++..+.++....+.|.+ +.+|.
T Consensus 20 ~l~v~~GdtV~f~--n~~~~~h~~~~~~~~~~~-----~~--------~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~ 84 (105)
T d2q5ba1 20 NVTVHPGDTVKWV--NNKLPPHNILFDDKQVPG-----AS--------KELADKLSHSQLMFSPGESYEITFSSDFPAGT 84 (105)
T ss_dssp EEEECTTEEEEEE--ECSSCCEEEEECGGGSGG-----GC--------HHHHHHHCEEEEECSTTCEEEEEECTTSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceeEeecCcccc-----cc--------cccCCccccccccccCCceEEEEEEeccCCce
Confidence 5788999999875 555556655544322110 00 00001134578888899999999975 67899
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.|+|.. |..+||.+.+.|+
T Consensus 85 y~y~C~~--H~~~GM~G~I~Ve 104 (105)
T d2q5ba1 85 YTYYCAP--HRGAGMVGKITVE 104 (105)
T ss_dssp EEEECST--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CCCCCCEEEEEEc
Confidence 9999986 9999999999985
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=97.14 E-value=0.00091 Score=51.49 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=50.4
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
..++++.|++|.|+ |.+...|-.... +.. +..-+...+.+|... .+.++.||.
T Consensus 19 ~~i~I~~GdtV~f~--n~d~~~h~~~~~---------~~~--------------~~~~~~~~~~~g~~~--~~tF~~~G~ 71 (91)
T d1bxua_ 19 STIEIQAGDTVQWV--NNKLAPHNVVVE---------GQP--------------ELSHKDLAFSPGETF--EATFSEPGT 71 (91)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEET---------TCG--------------GGCEEEEECSTTCEE--EEECCSCEE
T ss_pred CEEEECCCCEEEEE--ECCcCCceEEec---------ccc--------------cccccccccCCCCCE--EEEeccCce
Confidence 35778999999885 665555432221 111 112356666777654 467799999
Q ss_pred ceeeecchhhhhcccEEEEEEe
Q 009127 492 WNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V~ 513 (543)
+.|+|-. |...||-+.+.|+
T Consensus 72 y~Y~C~~--H~~~gM~G~I~Ve 91 (91)
T d1bxua_ 72 YTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CCCCCCEEEEEEC
Confidence 9999977 9999999999884
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.13 E-value=0.00058 Score=55.66 Aligned_cols=71 Identities=10% Similarity=0.178 Sum_probs=53.5
Q ss_pred EecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccce
Q 009127 414 MAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWN 493 (543)
Q Consensus 414 ~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w~ 493 (543)
+.++.|+.|.|.|.|.+ ..|.|.+-... =.+.+.||....+.|+++.||.|.
T Consensus 49 l~vp~G~~V~~~lts~D-V~H~f~ip~~~---------------------------v~~d~~PG~~~~~~~~~~~~G~y~ 100 (122)
T d2cuaa_ 49 IEVPQGAEIVFKITSPD-VIHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFKRPGEYR 100 (122)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEEEETTSS---------------------------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCEEEEEEEcCC-ccceeEecCCC---------------------------eeEEEecCceEEEEEEeccceeEE
Confidence 56789999999999985 44665542211 122355788888999999999999
Q ss_pred eeecc---hhhhhcccEEEEEEec
Q 009127 494 IRSEN---WARQYLGQQFYLRVYS 514 (543)
Q Consensus 494 ~HCHi---l~Hed~GMm~~~~V~~ 514 (543)
+.|+. ..| .+|.+.+.|++
T Consensus 101 ~~C~~~CG~~H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 101 IICNQYCGLGH--QNMFGTIVVKE 122 (122)
T ss_dssp EECCSCCSTTS--TTCEEEEEEEC
T ss_pred EEehhccCCCc--ccCeEEEEEEC
Confidence 99998 456 47999998864
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=97.11 E-value=0.00024 Score=64.14 Aligned_cols=80 Identities=14% Similarity=0.186 Sum_probs=63.2
Q ss_pred eeEEecCCCcEEEEEEEeCCCC-CCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecC-
Q 009127 411 TSVMAANFREFVEIVFQNWEDT-VQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDN- 488 (543)
Q Consensus 411 ~~~~~~~~g~~v~~~i~N~~~~-~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adn- 488 (543)
...++++.|+++++.|+|.+.. .+.|||+||+|+||+.++.. ..|...|.+.|.+|+.+.|.++++.
T Consensus 74 ~~~~~v~~g~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~-----------v~P~~v~~l~i~pGqRydvlv~~~~~ 142 (209)
T d1aoza2 74 PYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNY-----------VQPFYTSDIDIYSGESYSVLITTDQN 142 (209)
T ss_dssp CCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEE-----------EEEEEESCEEECTTCEEEEEEECCSC
T ss_pred ceEEEEcCCCEEEEEEEecCCceeEEEEeCCCcEEEEecCCEE-----------cccceeeeEEEccCcEEEEEEEecCC
Confidence 3468899999999999999865 68999999999999997532 2366779999999999999999975
Q ss_pred cc-cceeeecchhh
Q 009127 489 VG-MWNIRSENWAR 501 (543)
Q Consensus 489 pG-~w~~HCHil~H 501 (543)
+| .|.++=.....
T Consensus 143 ~~~~y~i~~~~~~~ 156 (209)
T d1aoza2 143 PSENYWVSVGTRAR 156 (209)
T ss_dssp TTCCEEEEEEEESS
T ss_pred CCCceEEEEecccc
Confidence 44 45555444333
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=97.10 E-value=0.00026 Score=55.48 Aligned_cols=80 Identities=18% Similarity=0.102 Sum_probs=50.9
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.++++.|++|.|+ |.+...|.++.+.... .... ..+....+.....++. .+.++++.+|.|
T Consensus 19 ~i~v~~GdtV~f~--n~~~~~h~~~~~~~~~---------~~~~------~~~~~~~~~~~~~~~~--t~~~tf~~~G~y 79 (98)
T d2plta_ 19 TLTIKSGETVNFV--NNAGFPHNIVFDEDAI---------PSGV------NADAISRDDYLNAPGE--TYSVKLTAAGEY 79 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECGGGS---------CTTC------CHHHHCEEEEECSTTC--EEEEECCSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceeEEEecCCc---------cccc------cCCcccccccccCCCc--eEEEEecCCceE
Confidence 5788999999886 5555566555442110 0000 0001123445554554 456678999999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
-|+|.. |..+||-+.+.|+
T Consensus 80 ~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d2plta_ 80 GYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEECGG--GGGGTCEEEEEEC
T ss_pred EEEeCc--CCCCCCEEEEEEC
Confidence 999975 9999999999884
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=96.65 E-value=0.00078 Score=55.09 Aligned_cols=34 Identities=12% Similarity=0.220 Sum_probs=29.5
Q ss_pred EEEEEecCcccceeeecchhhhhcccEEEEEEecCC
Q 009127 481 AIYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 481 ~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
.+.+.++.||.|.|+|.+ |..+||.+.+.|.++.
T Consensus 63 ~~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd~~ 96 (123)
T d1pmya_ 63 EAVVKFDKEGVYGFKCAP--HYMMGMVALVVVGDKR 96 (123)
T ss_dssp CEEEECCSCEEEEEECST--TTTTTCEEEEEESSCC
T ss_pred ccccccCCCceEEEEecc--CCCCCCEEEEEECCCC
Confidence 355678999999999987 9999999999997653
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.0014 Score=56.41 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=57.4
Q ss_pred EEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeec-CcccCCCCCCCCCCCC------CCCcCCCCCeEEEEEEe
Q 009127 47 QQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISW-NGLQQRRNSWQDGVYG------TTCPIPPGKNFTYVLQA 118 (543)
Q Consensus 47 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~-HG~~~~~~~~~DG~p~------tq~~i~PG~~~~y~f~~ 118 (543)
...+++||+. .|++.++ |.++|+|+.|... ....+++ +|.... ....||.+. ....|.|||+++.-+++
T Consensus 41 gd~~lvNG~~-~p~~~~~-~~~~RlR~iNa~~~~~~~~~~~~g~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 117 (165)
T d1kv7a2 41 GDTLLTNGAI-YPQHAAP-RGWLRLRLLNGCNARSLNFATSDNRPLY-VIASDGGLLPEPVKVSELPVLMGERFEVLVEV 117 (165)
T ss_dssp CSEEEETTBS-SCEEEEE-EEEEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESCEEECTTCEEEEEEEE
T ss_pred CCEEEEcCcc-cceEecc-CcEEEEEEEEcccCceeeEEecCCCeEE-EEEeCCccccCceEeCeEEECCCCEEEEEEEC
Confidence 4579999996 7999886 7799999999864 5556765 575433 246899753 34569999999999999
Q ss_pred CCCcccceec
Q 009127 119 KDQIGSYFYF 128 (543)
Q Consensus 119 ~~~~Gt~wYH 128 (543)
.+..+..|++
T Consensus 118 ~~~~~~~~~~ 127 (165)
T d1kv7a2 118 NDNKPFDLVT 127 (165)
T ss_dssp CTTCCEEEEE
T ss_pred CCCCcEEEEE
Confidence 6433344554
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=96.45 E-value=0.00079 Score=58.56 Aligned_cols=82 Identities=17% Similarity=0.248 Sum_probs=60.8
Q ss_pred eEEEEEECCcCCCceEEEecCCEEEEEEEECCC-CCceeec-CcccCCCCCCCCCCCC------CCCcCCCCCeEEEEEE
Q 009127 46 KQQGILINGQFPGPQIDAVTNDNLIISVYNYLR-EPFLISW-NGLQQRRNSWQDGVYG------TTCPIPPGKNFTYVLQ 117 (543)
Q Consensus 46 ~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~-HG~~~~~~~~~DG~p~------tq~~i~PG~~~~y~f~ 117 (543)
....+++||+. .|++.++ |.++++|+.|... ....+++ +|..+. ....||.+. ....|.|||+++.-++
T Consensus 47 ~Gd~~lvNG~~-~p~~~v~-~~~~RlRliNa~~~~~~~l~~~~g~~~~-vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~ 123 (174)
T d1gska2 47 CGETILVNGKV-WPYLEVE-PRKYRFRVINASNTRTYNLSLDNGGDFI-QIGSDGGLLPRSVKLNSFSLAPAERYDIIID 123 (174)
T ss_dssp CCSEEEETTEE-SCEEECC-SSEEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred cCCeEEecCcc-ceEEEec-CceEEEEEEecccCceeeEeecCCCcEE-EEEECCCcccCceEeCEEEEcCCcEEEEEEE
Confidence 34578999996 6999986 5689999999965 4567888 464332 246899763 2355899999999999
Q ss_pred eCCCcccceecCC
Q 009127 118 AKDQIGSYFYFPS 130 (543)
Q Consensus 118 ~~~~~Gt~wYH~H 130 (543)
+++.+|++|+--+
T Consensus 124 ~~~~~g~~~~l~~ 136 (174)
T d1gska2 124 FTAYEGESIILAN 136 (174)
T ss_dssp CGGGTTCEEEEEE
T ss_pred CCCCCCceEEEEc
Confidence 8755787776543
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.19 E-value=0.0018 Score=46.35 Aligned_cols=43 Identities=12% Similarity=-0.009 Sum_probs=35.7
Q ss_pred eCCCCEEEEEEEecCcc----------cceeeecchh--hhhcccEEEEEEecCC
Q 009127 474 VYPRSWTAIYMALDNVG----------MWNIRSENWA--RQYLGQQFYLRVYSPA 516 (543)
Q Consensus 474 vp~~g~v~irf~adnpG----------~w~~HCHil~--Hed~GMm~~~~V~~p~ 516 (543)
|.||++.+-+|+....+ .|.||||+.. +...||...+.|..+.
T Consensus 3 V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g 57 (67)
T d1sddb1 3 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKG 57 (67)
T ss_dssp BCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTT
T ss_pred CCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCC
Confidence 67899999999986544 8999999965 6677999999997664
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=96.18 E-value=0.0069 Score=49.56 Aligned_cols=97 Identities=7% Similarity=-0.060 Sum_probs=67.0
Q ss_pred EEecCCC-cEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCC---------CCCCCCCC-CCCCcceeEEeCCCCEEE
Q 009127 413 VMAANFR-EFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTP---------ASRTRYNL-RDTVARSTTQVYPRSWTA 481 (543)
Q Consensus 413 ~~~~~~g-~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~---------~~~~~~~~-~~p~~rDTv~vp~~g~v~ 481 (543)
.++++.| +.+.++|.|.+..+|-+ =+|.+-+...+. ... .....+.. ......-|..|.||+...
T Consensus 19 ~i~V~aG~e~v~i~~~N~g~lph~~--~~Hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~~~ 94 (129)
T d1cuoa_ 19 SISVPASCAEFTVNFEHKGHMPKTG--MGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTS 94 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHH--HCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEE
T ss_pred EEEEeCCCEEEEEEEEeCCcCCcee--EEeeeeeccccc--HHHHHHHHHhhcccccCCCCCchhhhhhccccCccccce
Confidence 4778899 89999999999888765 334564443321 000 00000101 111334478899999999
Q ss_pred EEEEe---cCcccceeeecchhhhhcccEEEEEEec
Q 009127 482 IYMAL---DNVGMWNIRSENWARQYLGQQFYLRVYS 514 (543)
Q Consensus 482 irf~a---dnpG~w~~HCHil~Hed~GMm~~~~V~~ 514 (543)
|.|++ ..||.|.|=|=+--|+ .||-+.+.|.+
T Consensus 95 i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 95 VKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp EEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred EEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 99997 4599999999999998 89999999863
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=95.94 E-value=0.0045 Score=50.02 Aligned_cols=33 Identities=9% Similarity=0.183 Sum_probs=28.7
Q ss_pred EEEEecCcccceeeecchhhhhcccEEEEEEecCC
Q 009127 482 IYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 482 irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
..++++.||.|-|+|-. |..+||.+.+.|.++.
T Consensus 64 ~s~tF~~~G~y~Y~Ctp--H~~~GM~G~I~Vg~~~ 96 (120)
T d1paza_ 64 YVLTVTQPGAYLVKCTP--HYAMGMIALIAVGDSP 96 (120)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESSSC
T ss_pred EEEEecCCCeEEEEEee--CCCCCCEEEEEECCCC
Confidence 45667999999999986 9999999999998753
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=95.94 E-value=0.0037 Score=48.42 Aligned_cols=31 Identities=13% Similarity=0.073 Sum_probs=27.2
Q ss_pred EEEEEecCcccceeeecchhhhhcccEEEEEEe
Q 009127 481 AIYMALDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 481 ~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
.+.++++.||.|-|+|-. |..+||-+.+.|+
T Consensus 67 ~~~~tf~~~G~y~Y~C~~--H~~~GM~G~I~Ve 97 (97)
T d2jxma1 67 FYSVTLGTPGTYSFYCTP--HRGAGMVGTITVE 97 (97)
T ss_dssp CEEEECCSCSEEEEECSS--TTTTTCEEEEEEC
T ss_pred EEEEecCCCeEEEEEEcc--CCCCCCEEEEEEC
Confidence 567778999999999965 9999999999884
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=95.91 E-value=0.0072 Score=46.96 Aligned_cols=82 Identities=16% Similarity=0.072 Sum_probs=48.9
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
..++++.|++|.|+ |.+..+|.+......+- .+ ...... ....+.....++.... +.++.||.
T Consensus 17 ~~iti~~GdtV~f~--n~~~~~Hnv~~~~~~~~-----~~----~~~~~~----~~~~~~~~~~~g~t~~--~tF~~~G~ 79 (99)
T d1plca_ 17 SEFSISPGEKIVFK--NNAGFPHNIVFDEDSIP-----SG----VDASKI----SMSEEDLLNAKGETFE--VALSNKGE 79 (99)
T ss_dssp SEEEECTTCEEEEE--ECSSCCBCCEECTTSSC-----TT----CCHHHH----CCCTTCCBCSTTCEEE--EECCSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCccEEEccCcCC-----Cc----cccccC----cccccccccCCCceEE--EecCCCce
Confidence 35788999999984 66566777543221110 00 000000 0111222334566544 45689999
Q ss_pred ceeeecchhhhhcccEEEEEE
Q 009127 492 WNIRSENWARQYLGQQFYLRV 512 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V 512 (543)
+-|+|- -|...||-+.+.|
T Consensus 80 y~Y~C~--pH~~~GM~G~I~V 98 (99)
T d1plca_ 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEeC--CCcCCCcEEEEEE
Confidence 999994 4999999999987
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=95.79 E-value=0.0011 Score=52.15 Aligned_cols=32 Identities=9% Similarity=0.073 Sum_probs=27.1
Q ss_pred EEEEEEecCcccceeeecchhhhhcccEEEEEEe
Q 009127 480 TAIYMALDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 480 v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
..+.+.++.||.|-|+|.. |..+||-..+.|+
T Consensus 71 ~~~~~~f~~~G~y~Y~C~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 71 PSFKAKVSTPGTYTFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp CEEEECCCSCEEEEEECST--TGGGTCEEEEEEC
T ss_pred cEEEEeeCCCceEEEEecC--CcccCCeEEEEEC
Confidence 3455667899999999986 9999999999884
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.71 E-value=0.018 Score=46.85 Aligned_cols=97 Identities=3% Similarity=-0.089 Sum_probs=67.3
Q ss_pred EEec-CCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCC--------CCCCCCCCCC-CCCCcceeEEeCCCCEEEE
Q 009127 413 VMAA-NFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQW--------TPASRTRYNL-RDTVARSTTQVYPRSWTAI 482 (543)
Q Consensus 413 ~~~~-~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~--------~~~~~~~~~~-~~p~~rDTv~vp~~g~v~i 482 (543)
.+++ +.|+.++++|.|.+..+|-+=+| ..-++..+. .. .......+.. ..-...-|..|.||+...|
T Consensus 19 ~i~V~k~Ge~v~l~~~N~g~~pH~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~~i 95 (128)
T d1jzga_ 19 AITVDKSCKQFTVNLSHPGNLPKNVMGH--NWVLSTAAD-MQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSV 95 (128)
T ss_dssp EEEECTTCSEEEEEEECCSSSCHHHHCB--CCEEEEGGG-HHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEEEE
T ss_pred eEEEecCCCEEEEEEEeCCccchheeec--Ccccccchh-HHHHHHHHHhhhhccccCCCCccchhhcccccCCCceEEE
Confidence 4778 58999999999999999886554 444443221 00 0000000100 1123455788999999999
Q ss_pred EEEe---cCcccceeeecchhhhhcccEEEEEEe
Q 009127 483 YMAL---DNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 483 rf~a---dnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|++ +.||.|.|=|=+--|+ .||-+.+.|.
T Consensus 96 ~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 96 TFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 9986 4799999999999999 8999999884
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=95.69 E-value=0.013 Score=47.66 Aligned_cols=98 Identities=6% Similarity=-0.093 Sum_probs=68.7
Q ss_pred EEec-CCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCC-C----CCC-CCCCCCC--CCCCcceeEEeCCCCEEEEE
Q 009127 413 VMAA-NFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQ-W----TPA-SRTRYNL--RDTVARSTTQVYPRSWTAIY 483 (543)
Q Consensus 413 ~~~~-~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~-~----~~~-~~~~~~~--~~p~~rDTv~vp~~g~v~ir 483 (543)
.+.+ +.|+.+.++|.|.+.++|.+=+| .+-++..+... . ... ....+-. ..+...-|..|.||+...|.
T Consensus 19 ~i~V~~~ge~v~i~~~N~g~~pH~~~~h--n~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~~i~ 96 (128)
T d1nwpa_ 19 DIAIDKSCKTFTVELTHSGSLPKNVMGH--NLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCB--CCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred eEEEecCCcEEEEEEEeCCccccceeee--cccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCceEEE
Confidence 4677 46999999999999999997554 56555542100 0 000 0011111 12345567888999999999
Q ss_pred EEe---cCcccceeeecchhhhhcccEEEEEEe
Q 009127 484 MAL---DNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 484 f~a---dnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|++ +.||.|.|=|=+--|. .||-+.+.|.
T Consensus 97 f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 97 FDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 998 4689999999999999 8999999884
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=95.69 E-value=0.014 Score=45.83 Aligned_cols=72 Identities=10% Similarity=-0.010 Sum_probs=46.1
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|++|.| .|.+...|.++.... .... ...+.-.+.+++. .++.++.||.+
T Consensus 34 ~i~V~~GdtV~f--~N~d~~~H~v~~~~~----------~~~~-----------~~~~~~~~~~g~~--~~~tf~~pG~y 88 (105)
T d2ov0a1 34 ELHVKVGDTVTW--INREAMPHNVHFVAG----------VLGE-----------AALKGPMMKKEQA--YSLTFTEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTT----------TSSS-----------SCEECCCBCTTEE--EEEEECSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceeEEEecc----------cCCc-----------ccccccccCCCce--EEEEecCCeEE
Confidence 367889999988 476677887553221 1100 0112223344554 45566899999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
.|+|-+ | .||.+.+.|+
T Consensus 89 ~y~C~~--H--~~M~G~I~Ve 105 (105)
T d2ov0a1 89 DYHCTP--H--PFMRGKVVVE 105 (105)
T ss_dssp EEECSS--C--TTCEEEEEEC
T ss_pred EEEecC--C--CCCEEEEEEC
Confidence 999987 5 6999999884
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=95.62 E-value=0.018 Score=44.43 Aligned_cols=38 Identities=13% Similarity=0.122 Sum_probs=29.6
Q ss_pred EEeCCCCEEEEEEEecCcccceeeecchhhhhcccEEEEEEe
Q 009127 472 TQVYPRSWTAIYMALDNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 472 v~vp~~g~v~irf~adnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
....++.+ +.+.++.||.+-|+|-. |..+||.+.+.|+
T Consensus 61 ~~~~~~~~--~~~~f~~~G~y~y~C~~--H~~~GM~G~I~Ve 98 (98)
T d1iuza_ 61 YLNSKGET--VVRKLSTPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EECSTTCE--EEEECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred cccCCCcE--EEEecCCCceEEEEeCC--CccCCCeEEEEEC
Confidence 33444543 45677899999999975 9999999999884
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=95.46 E-value=0.023 Score=46.22 Aligned_cols=96 Identities=4% Similarity=-0.120 Sum_probs=65.3
Q ss_pred EEec-CCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCC---------CCCCCCCCCC-CCcceeEEeCCCCEEE
Q 009127 413 VMAA-NFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTP---------ASRTRYNLRD-TVARSTTQVYPRSWTA 481 (543)
Q Consensus 413 ~~~~-~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~---------~~~~~~~~~~-p~~rDTv~vp~~g~v~ 481 (543)
.+++ +.|+.|+++|.|.+..+|-+=. |.|-+...+. ... .....+.... ...--|..+.||+...
T Consensus 19 ~i~V~k~G~~V~l~~~N~g~l~h~~m~--hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~~ 94 (129)
T d2ccwa1 19 EIVVDKSCKQFTMHLKHVGKMAKVAMG--HNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS 94 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHC--BCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEEEecCCCEEEEEEEcCCcCchheee--ccccccCccc--HHHHHHHHHHhhhccccCCCccccccccccccCCCceEE
Confidence 4677 6899999999999887765433 3555554321 000 0000010011 1223367788999999
Q ss_pred EEEEe---cCcccceeeecchhhhhcccEEEEEEe
Q 009127 482 IYMAL---DNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 482 irf~a---dnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
|.|++ +.||.|.|=|=+--|+ .||-+.+.|.
T Consensus 95 i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 95 VTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 99998 4799999999999998 8999999885
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=95.45 E-value=0.0046 Score=48.61 Aligned_cols=43 Identities=14% Similarity=0.083 Sum_probs=36.7
Q ss_pred ceeEEeCCCCEEEEEEEe-cCcccceeeecchhhhhcccEEEEEEe
Q 009127 469 RSTTQVYPRSWTAIYMAL-DNVGMWNIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 469 rDTv~vp~~g~v~irf~a-dnpG~w~~HCHil~Hed~GMm~~~~V~ 513 (543)
.++....++....+.|.+ +.||.|.|+|-. |..+||-+.+.|.
T Consensus 61 ~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~~--H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 61 HKQLLMSPGQSTSTTFPADAPAGEYTFYCEP--HRGAGMVGKITVA 104 (105)
T ss_dssp EEEEECSTTCEEEEECCTTCCSEEEEEECTT--TGGGTCEEEEEEC
T ss_pred ccccccCCCcceEEEEEeccCCceEEEEeCC--CcCCCcEEEEEEe
Confidence 467777788888888875 679999999975 9999999999985
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=95.17 E-value=0.021 Score=44.09 Aligned_cols=82 Identities=11% Similarity=0.007 Sum_probs=47.0
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
..++++.|++|.|+ |.+...|-+...... .... .... ......+.....++. .+.++++.||.
T Consensus 17 ~~i~v~~GdtV~f~--n~~~~~h~~~~~~~~----------~~~~-~~~~--~~~~~~~~~~~~~~~--~~~~tf~~~G~ 79 (99)
T d1bypa_ 17 SDLSIASGEKITFK--NNAGFPHNDLFDKKE----------VPAG-VDVT--KISMPEEDLLNAPGE--EYSVTLTEKGT 79 (99)
T ss_dssp SEEEECTTEEEEEE--ECSSCCBCCEECTTS----------SCTT-CCHH--HHSCCTTCCBCSTTC--EEEEEECSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCceeEEEecCC----------CCCc-cccc--cCcccccccccCCCc--eEEEEecCCce
Confidence 35788999998885 655555543321110 0000 0000 000112233333444 34556789999
Q ss_pred ceeeecchhhhhcccEEEEEE
Q 009127 492 WNIRSENWARQYLGQQFYLRV 512 (543)
Q Consensus 492 w~~HCHil~Hed~GMm~~~~V 512 (543)
+-|+|-. |...||.+.+.|
T Consensus 80 y~y~C~~--H~~~GM~G~I~V 98 (99)
T d1bypa_ 80 YKFYCAP--HAGAGMVGKVTV 98 (99)
T ss_dssp EEEECGG--GTTTTCEEEEEE
T ss_pred EEEEECc--CCCCCCEEEEEE
Confidence 9999965 999999999987
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=95.15 E-value=0.0072 Score=49.03 Aligned_cols=33 Identities=9% Similarity=0.204 Sum_probs=28.4
Q ss_pred EEEEecCcccceeeecchhhhhcccEEEEEEecCC
Q 009127 482 IYMALDNVGMWNIRSENWARQYLGQQFYLRVYSPA 516 (543)
Q Consensus 482 irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p~ 516 (543)
+.++++.+|.|-|+|=+ |..+||.+.+.|.++.
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vg~~~ 96 (123)
T d1adwa_ 64 YTLTVTEPGLYGVKCTP--HFGMGMVGLVQVGDAP 96 (123)
T ss_dssp EEEEECSCEEEEEECGG--GGGGTCEEEEEESSSC
T ss_pred eEEeccCCCeEEEEEcc--CCCCCCEEEEEECCCC
Confidence 45667999999999976 9999999999997653
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=94.17 E-value=0.037 Score=44.61 Aligned_cols=32 Identities=9% Similarity=0.167 Sum_probs=27.9
Q ss_pred EEEEecCcccceeeecchhhhhcccEEEEEEecC
Q 009127 482 IYMALDNVGMWNIRSENWARQYLGQQFYLRVYSP 515 (543)
Q Consensus 482 irf~adnpG~w~~HCHil~Hed~GMm~~~~V~~p 515 (543)
+.+.++.||.|-|+|-. |..+||.+.+.|.++
T Consensus 64 ~s~Tf~~~G~Y~Y~C~p--H~~~GM~G~IvVgd~ 95 (124)
T d1bqka_ 64 YKVTFTAPGVYGVKCTP--HYGMGMVGVVQVGDA 95 (124)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESSS
T ss_pred EEEecCCCceEEEEecc--CcCCCCEEEEEECCC
Confidence 45677999999999976 999999999999753
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=93.01 E-value=0.11 Score=40.31 Aligned_cols=72 Identities=13% Similarity=-0.049 Sum_probs=44.2
Q ss_pred EEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCcccc
Q 009127 413 VMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMW 492 (543)
Q Consensus 413 ~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~w 492 (543)
.+.++.|++|.| .|.+...|.+-... +.... ..-|.-.+.++. ...+.++.||.|
T Consensus 35 ~i~V~~GdtV~f--~N~d~~~H~v~~~~----------~~~~~-----------~~f~s~~~~~~~--~~~~tf~~~G~y 89 (106)
T d1id2a_ 35 EVTIKAGETVYW--VNGEVMPHNVAFKK----------GIVGE-----------DAFRGEMMTKDQ--AYAITFNEAGSY 89 (106)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECT----------TTSSS-----------SCEECCCBCTTE--EEEEEECSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceeEEecc----------ccCCc-----------ccccccccCCCc--eEEEecCCCeEE
Confidence 366889999877 47766666543211 00000 011222233343 355677999999
Q ss_pred eeeecchhhhhcccEEEEEEe
Q 009127 493 NIRSENWARQYLGQQFYLRVY 513 (543)
Q Consensus 493 ~~HCHil~Hed~GMm~~~~V~ 513 (543)
-|+|=+ | .||-+.+.|+
T Consensus 90 ~y~C~~--H--~~M~G~I~Ve 106 (106)
T d1id2a_ 90 DYFCTP--H--PFMRGKVIVE 106 (106)
T ss_dssp EEECSS--C--TTCEEEEEEC
T ss_pred EEEccC--C--CCCEEEEEEC
Confidence 999987 6 5999999874
|
| >d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Quinol oxidase (CyoA) species: Escherichia coli [TaxId: 562]
Probab=86.89 E-value=0.47 Score=39.41 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=51.7
Q ss_pred eEEecCCCcEEEEEEEeCCCCCCCeeecCCCeEEEeecCCCCCCCCCCCCCCCCCCcceeEEeCCCCEEEEEEEecCccc
Q 009127 412 SVMAANFREFVEIVFQNWEDTVQSYHIDGYSFFVVGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGM 491 (543)
Q Consensus 412 ~~~~~~~g~~v~~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~v~irf~adnpG~ 491 (543)
+.+.++.|+.|++.+.+.+ ..| .|+|-+.+ =-..+-||....+.|.++.||.
T Consensus 27 n~l~lP~g~pV~~~ltS~D-ViH-------sF~vP~l~--------------------~k~daiPG~~~~~~~~~~~~G~ 78 (158)
T d1cyxa_ 27 NEIAFPANTPVYFKVTSNS-VMH-------SFFIPRLG--------------------SQIYAMAGMQTRLHLIANEPGT 78 (158)
T ss_dssp SEEEEETTSCEEEEEEESS-SCE-------EEEEGGGT--------------------EEEEECTTCCEEEEECCSSSEE
T ss_pred eeEEeeCCCeEEEEEEcCC-cch-------hhhhhhcc--------------------eeeccCCCceeeeeeeecCCCc
Confidence 3466889999999999875 334 45552221 1123446778899999999999
Q ss_pred ceeeecchhhh-hcccEEEEEEec
Q 009127 492 WNIRSENWARQ-YLGQQFYLRVYS 514 (543)
Q Consensus 492 w~~HCHil~He-d~GMm~~~~V~~ 514 (543)
|...|..+--. +..|.+.+.|..
T Consensus 79 y~g~Cae~CG~gH~~M~~~v~vv~ 102 (158)
T d1cyxa_ 79 YDGICAEICGPGHSGMKFKAIATP 102 (158)
T ss_dssp EEEEECSCCSTTSTTCCEEEEEES
T ss_pred EEEEchhhcCcccccCceEEEEEC
Confidence 99999986655 445556665553
|