Citrus Sinensis ID: 009140


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540--
MGIFEEMGFCGNLEFFSSPHGEGEAFLEHEQETAAEEDYSDEEMDVDELERRMWRDRMLLKKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDSCPPVSAGGSGSFIISDSSDYDVEGVEDDRNVEVEEIKPRDVNLFNMGAMGRDRLMMTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLGFLERSSRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRPFGQPTQPKPATPPKNQTQSQFNISGLELPDDGQKMITDLMSFYDTNHQQNKSLNSGNLNAIGDQNQQQEQRKFQLQMDDSFYTKEL
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccHHHHHHHccccccccccccc
cccHHHcccccccHHccccccccccccccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccHHHHHHccccccccHHcccccEEEccccccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccEEccccccccccccEccccccccccccc
mgifeemgfcgnleffssphgegeafleheqetaaeedysdeemdvDELERRMWRDRMLLKKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGfvygiipekgkpvsgasdNLRAWWKEKVRFDRNGPAAIAKYQADHailgknedcgsvvstphslqelqDTTLGSLLSALMqhcdppqrrfplekgvappwwpngneewwpqlglpkdlgpppykkphdlkkaWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEAlsrklypdscppvsaggsgsfiisdssdydvegveddrnveveeikprdvnlfnmgamgrdrlmmtppmvpqikgeLVETNSDFIQkrkqpadqshlmmdqkiytcefpqcpygdyrlgflerssrnnhqlncpyrhnssqgfgmpnfqvnndqtvafsrpfgqptqpkpatppknqtqsqfnisglelpddgqKMITDLMSFydtnhqqnkslnsgnlnaigdqNQQQEQRKFQLqmddsfytkel
MGIFEEMGFCGNLEFFSSPHGEGEAFLEHEQEtaaeedysdeemdvDELERRMWRDRMLLKklkeqskskecvdsakqrqsqeqarrkkmSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDSCPPVSAGGSGSFIISDSSDYDVEGVEddrnveveeikprdvnlfnMGAMGRDRLMMTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLGFLERSSRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRPFGQPTQPKPATPPKNQTQSQFNISGLELPDDGQKMITDLMSFYDTNHQQNKSLNSGNLNAIGDQNQQQEQRKFQLQMDDSFYTKEL
MGIFEEMGFCGNLEFFSSPHGEGEAFLEHEQETAAEEDYSDEEMDVDELERRMWRDRMllkklkeqskskeCVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAppwwpngneewwpQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDSCPPVsaggsgsfiisdssdYDVEGVEDDRNVEVEEIKPRDVNLFNMGAMGRDRLMMTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLGFLERSSRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRPFGqptqpkpatppknqtqSQFNISGLELPDDGQKMITDLMSFYDTNHQQNKSLNSGNLNAIGDQNQQQEQRKFQLQMDDSFYTKEL
*****EMGFCGNLEFF*******************************************************************************GILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVST******L*DTTLGSLLSALMQHCD***RRFPLEKGVAPPWWPNGNEEWWPQLGLPKDL*******PHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLY*******************************************VNLFNMG*****************************************MMDQKIYTCEFPQCPYGDYRLGFLER****************************************************************************************************************************
**IFEEMGFCGNLEFFSSP**************************VDELERRMWRD******************************************KYMLKMMEVCKAQGFVYGIIPEKGKP****SDNLRAWWKEKVRFDRNGPAAIAKY**********************LQELQDTTLGSLLSALMQHCD***********VAPPWWPNGNEEWWPQLGLPK********KPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCL***MTAKESATWLAVINQEEALS**************************************************************************************************QKIYTCEFPQCPYGDYRLGFLERSSRNNHQLNCPY***************************************************LELPDDGQKMITDLMSFYDTN***********************************Y****
MGIFEEMGFCGNLEFFSSPHGEGEAFL******************VDELERRMWRDRMLLKKL*****************************AQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDSCPPVSAGGSGSFIISDSSDYDVEGVEDDRNVEVEEIKPRDVNLFNMGAMGRDRLMMTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLGFLERSSRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRPF*****************SQFNISGLELPDDGQKMITDLMSFYDTNHQQNKSLNSGNLNAIGD********KFQLQMDDSFYTKEL
*********CGNLE*FS********************DYSDEEMDVDELERRMWRDRMLLKKLKEQSK**********************SRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILG*********STPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDSCPPV************SSDYDVEGVE************************RDRLMMT***VPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLGFLERSSRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRPFGQ*****************FNISGLELPDDGQKMITDLMSFYDTNHQQN*SL**GNLN*****NQQQEQRKFQL**DDSF*****
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MGIFEEMGFCGNLEFFSSPHGEGEAFLEHEQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDSCPPVSAGGSGSFIISDSSDYDVEGVEDDRNVEVEEIKPRDVNLFNMGAMGRDRLMMTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLGFLERSSRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRPFGQPTQPKPATPPKNQTQSQFNISGLELPDDGQKMITDLMSFYDTNHQQNKSLNSGNLNAIGDQNQQQEQRKFQLQMDDSFYTKEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query542 2.2.26 [Sep-21-2011]
O24606628 Protein ETHYLENE INSENSIT yes no 0.898 0.775 0.632 1e-178
Q9SLH0584 ETHYLENE INSENSITIVE 3-li no no 0.922 0.856 0.621 1e-176
O23116567 ETHYLENE INSENSITIVE 3-li no no 0.533 0.509 0.608 1e-107
Q9FJQ5557 ETHYLENE INSENSITIVE 3-li no no 0.702 0.684 0.430 2e-91
O23115518 ETHYLENE INSENSITIVE 3-li no no 0.747 0.781 0.452 5e-91
Q9LX16471 Putative ETHYLENE INSENSI no no 0.476 0.547 0.612 4e-89
>sp|O24606|EIN3_ARATH Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1 SV=1 Back     alignment and function desciption
 Score =  626 bits (1614), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 324/512 (63%), Positives = 390/512 (76%), Gaps = 25/512 (4%)

Query: 3   IFEEMGFCGNLEFFSSPHGEGEAFL---EHEQETAAEEDYSDEEMDVDELERRMWRDRML 59
           +F EMG CGN++FFSS       F    + E ++  E+DY+D+E+DVDELERRMWRD+M 
Sbjct: 2   MFNEMGMCGNMDFFSSGSLGEVDFCPVPQAEPDSIVEDDYTDDEIDVDELERRMWRDKMR 61

Query: 60  LKKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIP 119
           LK+LKEQ K KE VD+AKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIP
Sbjct: 62  LKRLKEQDKGKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIP 121

Query: 120 EKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQEL 179
           E GKPV+GASDNLR WWK+KVRFDRNGPAAI KYQA++ I G +E    +  TPH+LQEL
Sbjct: 122 ENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGPTPHTLQEL 181

Query: 180 QDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPH 239
           QDTTLGSLLSALMQHCDPPQRRFPLEKGV PPWWPNG E+WWPQLGLPKD GP PYKKPH
Sbjct: 182 QDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKPH 241

Query: 240 DLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRK 299
           DLKKAWKV VLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLA+INQEE+L+R+
Sbjct: 242 DLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLARE 301

Query: 300 LYPDSCPPVS-AGGSGSFIISDSSDYDVEGVEDDRNVEVEEIKPRDV-NLFNMGAMGRDR 357
           LYP+SCPP+S +GGS S +++D S YDVEG E + + EVEE+KP  V N  N G + +  
Sbjct: 302 LYPESCPPLSLSGGSCSLLMNDCSQYDVEGFEKESHYEVEELKPEKVMNSSNFGMVAK-- 359

Query: 358 LMMTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLGFLE 417
            M   P    +K E+   NS+F++KRK P    + +MD+ ++TCE   C + +   GFL+
Sbjct: 360 -MHDFP----VKEEVPAGNSEFMRKRK-PNRDLNTIMDRTVFTCENLGCAHSEISRGFLD 413

Query: 418 RSSRNNHQLNCPYRHNSSQGFGMPN-FQVNNDQTVAFSRPFGQPTQPKPATPPKNQTQSQ 476
           R+SR+NHQL CP+R +       P+ F VN  + V      G P QP+P     N     
Sbjct: 414 RNSRDNHQLACPHRDSRLPYGAAPSRFHVNEVKPVV-----GFP-QPRPV----NSVAQP 463

Query: 477 FNISGLELPDDGQKMITDLMSFYDTNHQQNKS 508
            +++G+ +P+DGQKMI++LMS YD N Q N++
Sbjct: 464 IDLTGI-VPEDGQKMISELMSMYDRNVQSNQT 494




Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SLH0|EIL1_ARATH ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana GN=EIL1 PE=1 SV=1 Back     alignment and function description
>sp|O23116|EIL3_ARATH ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana GN=EIL3 PE=1 SV=1 Back     alignment and function description
>sp|Q9FJQ5|EIL5_ARATH ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidopsis thaliana GN=EIL5 PE=2 SV=1 Back     alignment and function description
>sp|O23115|EIL2_ARATH ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidopsis thaliana GN=EIL2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LX16|EIL4_ARATH Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=Arabidopsis thaliana GN=EIL4 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query542
297382802614 ethylene-insensitive 3-like 1 protein [C 0.996 0.879 0.857 0.0
225465369616 PREDICTED: protein ETHYLENE INSENSITIVE 0.987 0.868 0.812 0.0
224097500603 ethylene-insensitive 3d [Populus trichoc 0.963 0.865 0.775 0.0
117549810601 EIL2 [Prunus persica] 0.976 0.880 0.773 0.0
224110058603 ethylene-insensitive 3c [Populus trichoc 0.963 0.865 0.764 0.0
449446335615 PREDICTED: protein ETHYLENE INSENSITIVE 0.981 0.865 0.754 0.0
15425735615 EIN3-like protein [Cucumis melo] 0.981 0.865 0.750 0.0
292669001625 ethylene insensitive 3 class transcripti 0.972 0.843 0.720 0.0
449531729511 PREDICTED: protein ETHYLENE INSENSITIVE 0.928 0.984 0.761 0.0
292668999611 ethylene insensitive 3 class transcripti 0.968 0.859 0.736 0.0
>gi|297382802|gb|ADI40102.1| ethylene-insensitive 3-like 1 protein [Citrus sinensis] Back     alignment and taxonomy information
 Score =  947 bits (2449), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/541 (85%), Positives = 493/541 (91%), Gaps = 1/541 (0%)

Query: 1   MGIFEEMGFCGNLEFFSSPHGEGEAFLEHEQETAAEEDYSDEEMDVDELERRMWRDRMLL 60
           MGIFEEMGFCGNLEFFSSPHGEGEAFLEHE ETAAEEDYSDEE+DVDELERRMWRDRMLL
Sbjct: 1   MGIFEEMGFCGNLEFFSSPHGEGEAFLEHEHETAAEEDYSDEELDVDELERRMWRDRMLL 60

Query: 61  KKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE 120
           KKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE
Sbjct: 61  KKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE 120

Query: 121 KGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQELQ 180
           KGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAI GKNEDCGSVVSTPHSLQELQ
Sbjct: 121 KGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDCGSVVSTPHSLQELQ 180

Query: 181 DTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHD 240
           DTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWP G EEWWP+LGLPKD GPPPYKKPHD
Sbjct: 181 DTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHD 240

Query: 241 LKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKL 300
           LKKAWKV VLTAVIKHM PDIAKIRKLVRQSKCLQDKMTAKESATWLA+INQEEALSRKL
Sbjct: 241 LKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKL 300

Query: 301 YPDSCPPVSAGGSGSFIISDSSDYDVEGVEDDRNVEVEEIKPRDVNLFNMGAMG-RDRLM 359
           YPDSC P S GGSGSFIISD SDYDVEGV+++R+VEVEEIKP + NLFNMGAMG RDR M
Sbjct: 301 YPDSCLPASTGGSGSFIISDISDYDVEGVDNERDVEVEEIKPLEANLFNMGAMGSRDRFM 360

Query: 360 MTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLGFLERS 419
           M P +VP+IKGE+ ET+S+ IQKR+  AD+ H+ MDQKIYTCEFPQCPY DY  GFL+R+
Sbjct: 361 MPPSLVPRIKGEVFETHSESIQKRRPSADEPHMTMDQKIYTCEFPQCPYNDYHHGFLDRT 420

Query: 420 SRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRPFGQPTQPKPATPPKNQTQSQFNI 479
           SRNNHQLNCPYR+NSSQG  MPNFQ+NNDQ   FS PF Q T PKP TP KNQTQ Q+N+
Sbjct: 421 SRNNHQLNCPYRNNSSQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITPVKNQTQPQYNV 480

Query: 480 SGLELPDDGQKMITDLMSFYDTNHQQNKSLNSGNLNAIGDQNQQQEQRKFQLQMDDSFYT 539
           SGL LPDDGQKMI+DLMSFYDTN Q NKS++ G LN   D+NQQ EQ+KFQLQ+DDSFY 
Sbjct: 481 SGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNQQPEQQKFQLQLDDSFYN 540

Query: 540 K 540
           +
Sbjct: 541 Q 541




Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465369|ref|XP_002276380.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224097500|ref|XP_002310961.1| ethylene-insensitive 3d [Populus trichocarpa] gi|222850781|gb|EEE88328.1| ethylene-insensitive 3d [Populus trichocarpa] Back     alignment and taxonomy information
>gi|117549810|gb|ABK35086.1| EIL2 [Prunus persica] Back     alignment and taxonomy information
>gi|224110058|ref|XP_002315400.1| ethylene-insensitive 3c [Populus trichocarpa] gi|222864440|gb|EEF01571.1| ethylene-insensitive 3c [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449446335|ref|XP_004140927.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like isoform 1 [Cucumis sativus] gi|449446337|ref|XP_004140928.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|15425735|dbj|BAB64345.1| EIN3-like protein [Cucumis melo] Back     alignment and taxonomy information
>gi|292669001|gb|ADE41155.1| ethylene insensitive 3 class transcription factor [Malus x domestica] Back     alignment and taxonomy information
>gi|449531729|ref|XP_004172838.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|292668999|gb|ADE41154.1| ethylene insensitive 3 class transcription factor [Malus x domestica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query542
TAIR|locus:2059247584 EIL1 "ETHYLENE-INSENSITIVE3-li 0.830 0.770 0.598 5.4e-145
TAIR|locus:2091906628 EIN3 "ETHYLENE-INSENSITIVE3" [ 0.896 0.773 0.573 1.8e-144
TAIR|locus:2027754567 EIL3 "ETHYLENE-INSENSITIVE3-li 0.496 0.474 0.614 1.3e-84
TAIR|locus:2184088471 AT5G10120 [Arabidopsis thalian 0.488 0.562 0.555 4.6e-80
TAIR|locus:2178988518 EIL2 "ETHYLENE-INSENSITIVE3-li 0.531 0.555 0.5 5.2e-79
TAIR|locus:2171815557 AT5G65100 [Arabidopsis thalian 0.492 0.479 0.517 5.9e-78
TAIR|locus:2059247 EIL1 "ETHYLENE-INSENSITIVE3-like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1345 (478.5 bits), Expect = 5.4e-145, Sum P(2) = 5.4e-145
 Identities = 279/466 (59%), Positives = 329/466 (70%)

Query:     1 MGIFEEMGFCGNLEFFSSPHGEGEAFL-EHEQETAAEE-DYSDEEMDVDELERRMWRDRM 58
             M +F EMG  GN++FFSS        L + EQE   E+ DY+D+EMDVDELE+RMWRD+M
Sbjct:     1 MMMFNEMGMYGNMDFFSSSTSLDVCPLPQAEQEPVVEDVDYTDDEMDVDELEKRMWRDKM 60

Query:    59 XXXXXXXXXXX-XXCVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI 117
                            VD +KQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI
Sbjct:    61 RLKRLKEQQSKCKEGVDGSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI 120

Query:   118 IPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVS-TPHSL 176
             IPEKGKPV+GASDNLR WWK+KVRFDRNGPAAIAKYQ+++ I G + DC S+V  TPH+L
Sbjct:   121 IPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQSENNISGGSNDCNSLVGPTPHTL 180

Query:   177 QELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAXXXXXXXXXXXXXQLGLPKDLGPPPYK 236
             QELQDTTLGSLLSALMQHCDPPQRRFPLEKGV+             QLGLP + GPPPYK
Sbjct:   181 QELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPNGNEEWWPQLGLPNEQGPPPYK 240

Query:   237 KPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEAL 296
             KPHDLKKAWKV VLTAVIKHM PDIAKIRKLVRQSKCLQDKMTAKESATWLA+INQEE +
Sbjct:   241 KPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVV 300

Query:   297 SRKLYPDSCPPVXXXXXXXXXXXXX---XXYDVEGVEDDRN-VEVEEIKPRDVNLFNMGA 352
             +R+LYP+SCPP+                  YDVEG E +++  +VEE KP  V +  + +
Sbjct:   301 ARELYPESCPPLSSSSSLGSGSLLINDCSEYDVEGFEKEQHGFDVEERKPEIVMMHPLAS 360

Query:   353 MGRDRLMMTPPMVPQIKGELVET-NSDFIQKRKQPADQSHLMMDQKI-YTCEFPQCPYGD 410
              G  ++   P     IK E+  T N +F +KRKQ  D + ++MD+   YTCE  QCP+  
Sbjct:   361 FGVAKMQHFP-----IKEEVATTVNLEFTRKRKQNNDMNVMVMDRSAGYTCENGQCPHSK 415

Query:   411 YRLGFLERSSRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRP 456
               LGF +RSSR+NHQ+ CPYR N    +G   F +   + V   +P
Sbjct:   416 MNLGFQDRSSRDNHQMVCPYRDNRL-AYGASKFHMGGMKLVVPQQP 460


GO:0005634 "nucleus" evidence=ISM;IEA
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS
GO:0009723 "response to ethylene stimulus" evidence=IMP
GO:0009873 "ethylene mediated signaling pathway" evidence=TAS
GO:0042742 "defense response to bacterium" evidence=IGI
GO:0071281 "cellular response to iron ion" evidence=IEP
GO:0005515 "protein binding" evidence=IPI
TAIR|locus:2091906 EIN3 "ETHYLENE-INSENSITIVE3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027754 EIL3 "ETHYLENE-INSENSITIVE3-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184088 AT5G10120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178988 EIL2 "ETHYLENE-INSENSITIVE3-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171815 AT5G65100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O24606EIN3_ARATHNo assigned EC number0.63280.89850.7754yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00033938001
SubName- Full=Chromosome undetermined scaffold_71, whole genome shotgun sequence; (600 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
PLN03109599 PLN03109, PLN03109, ETHYLENE-INSENSITIVE3-like3 pr 1e-163
pfam04873332 pfam04873, EIN3, Ethylene insensitive 3 1e-111
>gnl|CDD|215581 PLN03109, PLN03109, ETHYLENE-INSENSITIVE3-like3 protein; Provisional Back     alignment and domain information
 Score =  477 bits (1229), Expect = e-163
 Identities = 198/309 (64%), Positives = 241/309 (77%), Gaps = 12/309 (3%)

Query: 32  ETAAEEDYSDEEMDVDELERRMWRDRMLLKKLKEQSK--SKECVDSAKQRQSQEQARRKK 89
           +   E D SDEE++ ++LERRMW+DR+ LK++KE+ K   +  ++ +K ++  +QARRKK
Sbjct: 25  DNLTENDVSDEEIEAEDLERRMWKDRIKLKRIKERQKKLQQAALEKSKPKKISDQARRKK 84

Query: 90  MSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAA 149
           MSRAQDGILKYMLK+MEVCKA+GFVYGIIPEKGKPVSGASDN+RAWWKEKV+FD+NGPAA
Sbjct: 85  MSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAA 144

Query: 150 IAKYQADHAILGKNEDCGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVA 209
           IAKY+A+   +G+ E   S  ++ HSLQ+LQD TLGSLLS+LMQHCDPPQR++PLEKGV 
Sbjct: 145 IAKYEAECLAMGEAE--SSGNNSQHSLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVP 202

Query: 210 PPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVR 269
           PPWWP+GNE+WW +LGLPK    PPYKKPHDLKK WKV VLTAVIKHM PD  KIR+ VR
Sbjct: 203 PPWWPSGNEDWWVKLGLPKGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDFDKIRRHVR 261

Query: 270 QSKCLQDKMTAKESATWLAVINQEEALSRKLYPDS-------CPPVSAGGSGSFIISDSS 322
           QSKCLQDKMTAKES  WL V+N+EE+L R+   D+        P           IS  S
Sbjct: 262 QSKCLQDKMTAKESLIWLGVLNREESLIRQPSSDNGTSGITETPRGGHEDRNKDAISSDS 321

Query: 323 DYDVEGVED 331
           DYDV+G+ED
Sbjct: 322 DYDVDGLED 330


Length = 599

>gnl|CDD|218302 pfam04873, EIN3, Ethylene insensitive 3 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 542
PLN03109599 ETHYLENE-INSENSITIVE3-like3 protein; Provisional 100.0
PF04873354 EIN3: Ethylene insensitive 3; InterPro: IPR006957 100.0
PF11001126 DUF2841: Protein of unknown function (DUF2841); In 97.09
>PLN03109 ETHYLENE-INSENSITIVE3-like3 protein; Provisional Back     alignment and domain information
Probab=100.00  E-value=9.5e-149  Score=1150.78  Aligned_cols=302  Identities=66%  Similarity=1.119  Sum_probs=281.7

Q ss_pred             ccccccccCCccCCCHHHHHHhhhhhhHhHHHhhhhccchhhh--hhhhccccHHHHHHhhhhhhhhhHHHHHHHHHHHH
Q 009140           31 QETAAEEDYSDEEMDVDELERRMWRDRMLLKKLKEQSKSKECV--DSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVC  108 (542)
Q Consensus        31 ~~~~~e~~~sdeei~~eeLerRmWkDr~~Lkrlke~~~~~~~~--~~~k~~~~~eqarRKkMsRAQDgILkyMlKmMEvC  108 (542)
                      .++++|+|+||||||+||||||||||||+||||||++|..+..  +..|+++++||||||||+|||||||||||||||||
T Consensus        24 c~~~~~~~~sdeei~~~el~rrmwkd~~~l~rlke~~~~~~~~~~e~~~~~~~~~~arrkkm~raqdgilkymlk~me~c  103 (599)
T PLN03109         24 CDNLTENDVSDEEIEAEDLERRMWKDRIKLKRIKERQKKLQQAALEKSKPKKISDQARRKKMSRAQDGILKYMLKLMEVC  103 (599)
T ss_pred             cCCCcccccccccCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4678899999999999999999999999999999998875544  36788999999999999999999999999999999


Q ss_pred             hhccceeeecCCCCcccCCCChhhHHHHhhhhcccccchhhhhhhhhhhhccCCCCCCCCCCCCcchhhhcchhhhhhHH
Q 009140          109 KAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQELQDTTLGSLL  188 (542)
Q Consensus       109 ~AqGFVYGIIpekGKPvsGaSDnLR~WWKekVrFDrngPaAiaky~~~~~~~~~~~~~~~~~~~~h~L~dLqDtTLGSLL  188 (542)
                      |||||||||||||||||||||||||+|||||||||||||||||||++||++++.++....  +++|+|+|||||||||||
T Consensus       104 ~a~gfvygiipekgkpvsg~sd~lr~wwk~~v~fd~~gp~ai~ky~~~~~~~~~~~~~~~--~~~~~l~~lqd~tLgsll  181 (599)
T PLN03109        104 KARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMGEAESSGN--NSQHSLQDLQDATLGSLL  181 (599)
T ss_pred             hhcceeEEeccCCCCCCCCCchHHHHHHHHhcccccccHHHHHHhhhhcccccccccCCc--ccHHHHHHHHHhHHHHHH
Confidence            999999999999999999999999999999999999999999999999999988765553  899999999999999999


Q ss_pred             HHhhhcCCCCccCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCcchhhhhhhhhhhhhhhccCcCHHHHHHHH
Q 009140          189 SALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLV  268 (542)
Q Consensus       189 SaLmqhC~PPQRrfPLekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkKPHdLKKawKV~VLtAVIKHmsPd~~kir~lV  268 (542)
                      |||||||+|||||||||||+||||||||+|+||+++|++++++ |||||||||||||||+|||||||||||||+|||+||
T Consensus       182 salmqhC~Ppqr~~plekg~~PPWWPtg~E~WW~~~g~~~~~~-pPykkphdLkK~wKv~vl~avikhmsPd~~kir~~v  260 (599)
T PLN03109        182 SSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLPKGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDFDKIRRHV  260 (599)
T ss_pred             HHHHhhcCChhhcCCCCCCCCCCCCCCCCcchhhhcCCCCCCC-CCCCCchhhhhHHHHHHHHHHHHHhCccHHHHHHHH
Confidence            9999999999999999999999999999999999999999865 999999999999999999999999999999999999


Q ss_pred             hhhccchhhhhhHhHhhHHHHHhhHHHHhhhcCCCCC-------CCCCCCCCCcccccCCCCccccCcccccch
Q 009140          269 RQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDSC-------PPVSAGGSGSFIISDSSDYDVEGVEDDRNV  335 (542)
Q Consensus       269 rqSkcLQdKmTakEs~tW~~vl~qEE~l~~~l~p~~~-------~p~s~~g~g~~~~~~~~eYDVdg~e~~~~~  335 (542)
                      |||||||||||||||+||++||+|||+|++++..++.       |..+.++....++|+++||||||+||.+..
T Consensus       261 r~Sk~lqdkmtakEs~~W~~vl~~Ee~~~~~~s~DNGtS~ITe~P~g~~~~rk~~~~SSdsdYDVDg~eD~~gS  334 (599)
T PLN03109        261 RQSKCLQDKMTAKESLIWLGVLNREESLIRQPSSDNGTSGITETPRGGHEDRNKDAISSDSDYDVDGLEDAPGS  334 (599)
T ss_pred             HhchhHHhhhhHHHHHHHHHHHHHHHHHhcccCCCCCccccccCCCCccccCCCCCcCCCcccccccccCCCCC
Confidence            9999999999999999999999999999999877754       232345555678899999999999998763



>PF04873 EIN3: Ethylene insensitive 3; InterPro: IPR006957 Ethylene insensitive 3 (EIN3) proteins are a family of plant DNA-binding proteins that regulate transcription in response to the gaseous plant hormone ethylene, and are essential for ethylene-mediated responses Back     alignment and domain information
>PF11001 DUF2841: Protein of unknown function (DUF2841); InterPro: IPR021264 This family of proteins with unknown function are all present in yeast Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
1wij_A140 Solution Structure Of The Dna-Binding Domain Of Eth 1e-43
>pdb|1WIJ|A Chain A, Solution Structure Of The Dna-Binding Domain Of Ethylene- Insensitive3-Like3 Length = 140 Back     alignment and structure

Iteration: 1

Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 87/129 (67%), Positives = 99/129 (76%), Gaps = 1/129 (0%) Query: 176 LQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAXXXXXXXXXXXXXQLGLPKDLGPPPY 235 LQ+LQD TLGSLLS+LMQHCDPPQR++PLEKG +LGLPK PP Y Sbjct: 12 LQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQSPP-Y 70 Query: 236 KKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEA 295 +KPHDLKK WKV VLTAVI HM PDIAKI++ VRQSKCLQDKMTAKESA WLAV+NQEE+ Sbjct: 71 RKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEES 130 Query: 296 LSRKLYPDS 304 L ++ P S Sbjct: 131 LIQQSGPSS 139

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
1wij_A140 Ethylene-insensitive3-like 3 protein; DNA-binding 2e-75
>1wij_A Ethylene-insensitive3-like 3 protein; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.140.5.1 Length = 140 Back     alignment and structure
 Score =  234 bits (597), Expect = 2e-75
 Identities = 98/139 (70%), Positives = 111/139 (79%), Gaps = 1/139 (0%)

Query: 166 CGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLG 225
                 +   LQ+LQD TLGSLLS+LMQHCDPPQR++PLEKG  PPWWP GNEEWW +LG
Sbjct: 2   SSGSSGSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLG 61

Query: 226 LPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESAT 285
           LPK    PPY+KPHDLKK WKV VLTAVI HM PDIAKI++ VRQSKCLQDKMTAKESA 
Sbjct: 62  LPKS-QSPPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAI 120

Query: 286 WLAVINQEEALSRKLYPDS 304
           WLAV+NQEE+L ++  P S
Sbjct: 121 WLAVLNQEESLIQQSGPSS 139


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query542
1wij_A140 Ethylene-insensitive3-like 3 protein; DNA-binding 100.0
>1wij_A Ethylene-insensitive3-like 3 protein; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.140.5.1 Back     alignment and structure
Probab=100.00  E-value=8.7e-82  Score=562.33  Aligned_cols=138  Identities=71%  Similarity=1.235  Sum_probs=126.5

Q ss_pred             CCCCCCCcchhhhcchhhhhhHHHHhhhcCCCCccCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCcchhhhh
Q 009140          166 CGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAW  245 (542)
Q Consensus       166 ~~~~~~~~h~L~dLqDtTLGSLLSaLmqhC~PPQRrfPLekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkKPHdLKKaw  245 (542)
                      +++.++++|+|+||||||||||||||||||+|||||||||||+||||||||+|+||+++|++++|+ |||||||||||||
T Consensus         2 ~~~~~~~~h~L~~Lqd~TLgsllsaLmqhC~PPQR~~Plekg~~PPWWPtG~E~WW~~lGl~~~~~-PPYkkPhdLkKaw   80 (140)
T 1wij_A            2 SSGSSGSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMW   80 (140)
T ss_dssp             ------CCCCSTTSCHHHHHHHHHHHSSSSSSCTTSCCTTTCCHHHHCCCSCCHHHHHHTCCTTCC-CCCCCGGGCCHHH
T ss_pred             CccccccHHHHHHHHHHhHHHHHHHHHhhCCCchhcCCCCCCCCcCCCCCCCchhHHhcCCCCCCC-CCCCCchhhhHHH
Confidence            456789999999999999999999999999999999999999999999999999999999999998 9999999999999


Q ss_pred             hhhhhhhhhhccCcCHHHHHHHHhhhccchhhhhhHhHhhHHHHHhhHHHHhhhcCCCC
Q 009140          246 KVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDS  304 (542)
Q Consensus       246 KV~VLtAVIKHmsPd~~kir~lVrqSkcLQdKmTakEs~tW~~vl~qEE~l~~~l~p~~  304 (542)
                      ||+|||||||||||||+|||+|||||||||||||||||+||++||||||+++++++|++
T Consensus        81 KV~VLtAVIKHmsPd~~kir~lVrqSk~lqdKmTakEs~~W~~vl~~Ee~~~~~~~p~~  139 (140)
T 1wij_A           81 KVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQSGPSS  139 (140)
T ss_dssp             HHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTTCCSHHHHHHHHHHTTTTTCSCC-----
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHhhhhHHhhhhHHHHHHHHHHHHHHHHHHhccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999875




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 542
d1wija_127 a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like 5e-81
>d1wija_ a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 127 Back     information, alignment and structure

class: All alpha proteins
fold: LEM/SAP HeH motif
superfamily: DNA-binding domain of EIN3-like
family: DNA-binding domain of EIN3-like
domain: Ethylene insensitive 3 (EIN3)-like protein 3, EIL3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 Score =  246 bits (630), Expect = 5e-81
 Identities = 96/126 (76%), Positives = 108/126 (85%), Gaps = 1/126 (0%)

Query: 174 HSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPP 233
             LQ+LQD TLGSLLS+LMQHCDPPQR++PLEKG  PPWWP GNEEWW +LGLPK    P
Sbjct: 3   FVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKS-QSP 61

Query: 234 PYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQE 293
           PY+KPHDLKK WKV VLTAVI HM PDIAKI++ VRQSKCLQDKMTAKESA WLAV+NQE
Sbjct: 62  PYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQE 121

Query: 294 EALSRK 299
           E+L ++
Sbjct: 122 ESLIQQ 127


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query542
d1wija_127 Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 100.0
>d1wija_ a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All alpha proteins
fold: LEM/SAP HeH motif
superfamily: DNA-binding domain of EIN3-like
family: DNA-binding domain of EIN3-like
domain: Ethylene insensitive 3 (EIN3)-like protein 3, EIL3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00  E-value=1.1e-79  Score=539.07  Aligned_cols=127  Identities=76%  Similarity=1.333  Sum_probs=124.4

Q ss_pred             CcchhhhcchhhhhhHHHHhhhcCCCCccCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCcchhhhhhhhhhh
Q 009140          172 TPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLT  251 (542)
Q Consensus       172 ~~h~L~dLqDtTLGSLLSaLmqhC~PPQRrfPLekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkKPHdLKKawKV~VLt  251 (542)
                      ++|.|+||||||||||||||||||+|||||||||||+||||||||+|+||+++|++++++ |||||||||||||||+|||
T Consensus         1 ~~~~L~~LqD~TLgsllsaLmqhC~PPQR~~Plekg~pPPWWPtG~E~WW~~lg~~~~~~-PPYkkPhdLkKawKv~vL~   79 (127)
T d1wija_           1 SQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMWKVGVLT   79 (127)
T ss_dssp             CCCCSTTSCHHHHHHHHHHHSSSSSSCTTSCCTTTCCHHHHCCCSCCHHHHHHTCCTTCC-CCCCCGGGCCHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCCCcCCCCCCCchhHHhcCCCCCCC-CCCCChHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999999999999999998 7999999999999999999


Q ss_pred             hhhhccCcCHHHHHHHHhhhccchhhhhhHhHhhHHHHHhhHHHHhhh
Q 009140          252 AVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRK  299 (542)
Q Consensus       252 AVIKHmsPd~~kir~lVrqSkcLQdKmTakEs~tW~~vl~qEE~l~~~  299 (542)
                      ||||||||||+|||+|||||||||||||||||+||++||+|||+|+++
T Consensus        80 aVIKHmsPd~~kir~lVr~sk~lqdkmTakEs~~W~~vl~~Ee~l~~~  127 (127)
T d1wija_          80 AVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQ  127 (127)
T ss_dssp             HHHHHTGGGHHHHHHTTTTSSSSTTTCCSHHHHHHHHHHTTTTTCSCC
T ss_pred             HHHHHhCCcHHHHHHHHHHhHHHHHHHhHHHHHHHHHHHHhHHHHhcC
Confidence            999999999999999999999999999999999999999999999874