Citrus Sinensis ID: 009140
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 542 | ||||||
| 297382802 | 614 | ethylene-insensitive 3-like 1 protein [C | 0.996 | 0.879 | 0.857 | 0.0 | |
| 225465369 | 616 | PREDICTED: protein ETHYLENE INSENSITIVE | 0.987 | 0.868 | 0.812 | 0.0 | |
| 224097500 | 603 | ethylene-insensitive 3d [Populus trichoc | 0.963 | 0.865 | 0.775 | 0.0 | |
| 117549810 | 601 | EIL2 [Prunus persica] | 0.976 | 0.880 | 0.773 | 0.0 | |
| 224110058 | 603 | ethylene-insensitive 3c [Populus trichoc | 0.963 | 0.865 | 0.764 | 0.0 | |
| 449446335 | 615 | PREDICTED: protein ETHYLENE INSENSITIVE | 0.981 | 0.865 | 0.754 | 0.0 | |
| 15425735 | 615 | EIN3-like protein [Cucumis melo] | 0.981 | 0.865 | 0.750 | 0.0 | |
| 292669001 | 625 | ethylene insensitive 3 class transcripti | 0.972 | 0.843 | 0.720 | 0.0 | |
| 449531729 | 511 | PREDICTED: protein ETHYLENE INSENSITIVE | 0.928 | 0.984 | 0.761 | 0.0 | |
| 292668999 | 611 | ethylene insensitive 3 class transcripti | 0.968 | 0.859 | 0.736 | 0.0 |
| >gi|297382802|gb|ADI40102.1| ethylene-insensitive 3-like 1 protein [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/541 (85%), Positives = 493/541 (91%), Gaps = 1/541 (0%)
Query: 1 MGIFEEMGFCGNLEFFSSPHGEGEAFLEHEQETAAEEDYSDEEMDVDELERRMWRDRMLL 60
MGIFEEMGFCGNLEFFSSPHGEGEAFLEHE ETAAEEDYSDEE+DVDELERRMWRDRMLL
Sbjct: 1 MGIFEEMGFCGNLEFFSSPHGEGEAFLEHEHETAAEEDYSDEELDVDELERRMWRDRMLL 60
Query: 61 KKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE 120
KKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE
Sbjct: 61 KKLKEQSKSKECVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE 120
Query: 121 KGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQELQ 180
KGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAI GKNEDCGSVVSTPHSLQELQ
Sbjct: 121 KGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNEDCGSVVSTPHSLQELQ 180
Query: 181 DTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHD 240
DTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWP G EEWWP+LGLPKD GPPPYKKPHD
Sbjct: 181 DTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTGTEEWWPELGLPKDQGPPPYKKPHD 240
Query: 241 LKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKL 300
LKKAWKV VLTAVIKHM PDIAKIRKLVRQSKCLQDKMTAKESATWLA+INQEEALSRKL
Sbjct: 241 LKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRKL 300
Query: 301 YPDSCPPVSAGGSGSFIISDSSDYDVEGVEDDRNVEVEEIKPRDVNLFNMGAMG-RDRLM 359
YPDSC P S GGSGSFIISD SDYDVEGV+++R+VEVEEIKP + NLFNMGAMG RDR M
Sbjct: 301 YPDSCLPASTGGSGSFIISDISDYDVEGVDNERDVEVEEIKPLEANLFNMGAMGSRDRFM 360
Query: 360 MTPPMVPQIKGELVETNSDFIQKRKQPADQSHLMMDQKIYTCEFPQCPYGDYRLGFLERS 419
M P +VP+IKGE+ ET+S+ IQKR+ AD+ H+ MDQKIYTCEFPQCPY DY GFL+R+
Sbjct: 361 MPPSLVPRIKGEVFETHSESIQKRRPSADEPHMTMDQKIYTCEFPQCPYNDYHHGFLDRT 420
Query: 420 SRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRPFGQPTQPKPATPPKNQTQSQFNI 479
SRNNHQLNCPYR+NSSQG MPNFQ+NNDQ FS PF Q T PKP TP KNQTQ Q+N+
Sbjct: 421 SRNNHQLNCPYRNNSSQGCVMPNFQINNDQPAVFSLPFAQSTHPKPITPVKNQTQPQYNV 480
Query: 480 SGLELPDDGQKMITDLMSFYDTNHQQNKSLNSGNLNAIGDQNQQQEQRKFQLQMDDSFYT 539
SGL LPDDGQKMI+DLMSFYDTN Q NKS++ G LN D+NQQ EQ+KFQLQ+DDSFY
Sbjct: 481 SGLGLPDDGQKMISDLMSFYDTNLQPNKSMSQGCLNVTEDRNQQPEQQKFQLQLDDSFYN 540
Query: 540 K 540
+
Sbjct: 541 Q 541
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225465369|ref|XP_002276380.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224097500|ref|XP_002310961.1| ethylene-insensitive 3d [Populus trichocarpa] gi|222850781|gb|EEE88328.1| ethylene-insensitive 3d [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|117549810|gb|ABK35086.1| EIL2 [Prunus persica] | Back alignment and taxonomy information |
|---|
| >gi|224110058|ref|XP_002315400.1| ethylene-insensitive 3c [Populus trichocarpa] gi|222864440|gb|EEF01571.1| ethylene-insensitive 3c [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449446335|ref|XP_004140927.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like isoform 1 [Cucumis sativus] gi|449446337|ref|XP_004140928.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|15425735|dbj|BAB64345.1| EIN3-like protein [Cucumis melo] | Back alignment and taxonomy information |
|---|
| >gi|292669001|gb|ADE41155.1| ethylene insensitive 3 class transcription factor [Malus x domestica] | Back alignment and taxonomy information |
|---|
| >gi|449531729|ref|XP_004172838.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|292668999|gb|ADE41154.1| ethylene insensitive 3 class transcription factor [Malus x domestica] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 542 | ||||||
| TAIR|locus:2059247 | 584 | EIL1 "ETHYLENE-INSENSITIVE3-li | 0.830 | 0.770 | 0.598 | 5.4e-145 | |
| TAIR|locus:2091906 | 628 | EIN3 "ETHYLENE-INSENSITIVE3" [ | 0.896 | 0.773 | 0.573 | 1.8e-144 | |
| TAIR|locus:2027754 | 567 | EIL3 "ETHYLENE-INSENSITIVE3-li | 0.496 | 0.474 | 0.614 | 1.3e-84 | |
| TAIR|locus:2184088 | 471 | AT5G10120 [Arabidopsis thalian | 0.488 | 0.562 | 0.555 | 4.6e-80 | |
| TAIR|locus:2178988 | 518 | EIL2 "ETHYLENE-INSENSITIVE3-li | 0.531 | 0.555 | 0.5 | 5.2e-79 | |
| TAIR|locus:2171815 | 557 | AT5G65100 [Arabidopsis thalian | 0.492 | 0.479 | 0.517 | 5.9e-78 |
| TAIR|locus:2059247 EIL1 "ETHYLENE-INSENSITIVE3-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1345 (478.5 bits), Expect = 5.4e-145, Sum P(2) = 5.4e-145
Identities = 279/466 (59%), Positives = 329/466 (70%)
Query: 1 MGIFEEMGFCGNLEFFSSPHGEGEAFL-EHEQETAAEE-DYSDEEMDVDELERRMWRDRM 58
M +F EMG GN++FFSS L + EQE E+ DY+D+EMDVDELE+RMWRD+M
Sbjct: 1 MMMFNEMGMYGNMDFFSSSTSLDVCPLPQAEQEPVVEDVDYTDDEMDVDELEKRMWRDKM 60
Query: 59 XXXXXXXXXXX-XXCVDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI 117
VD +KQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI
Sbjct: 61 RLKRLKEQQSKCKEGVDGSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI 120
Query: 118 IPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVS-TPHSL 176
IPEKGKPV+GASDNLR WWK+KVRFDRNGPAAIAKYQ+++ I G + DC S+V TPH+L
Sbjct: 121 IPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQSENNISGGSNDCNSLVGPTPHTL 180
Query: 177 QELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAXXXXXXXXXXXXXQLGLPKDLGPPPYK 236
QELQDTTLGSLLSALMQHCDPPQRRFPLEKGV+ QLGLP + GPPPYK
Sbjct: 181 QELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPNGNEEWWPQLGLPNEQGPPPYK 240
Query: 237 KPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEAL 296
KPHDLKKAWKV VLTAVIKHM PDIAKIRKLVRQSKCLQDKMTAKESATWLA+INQEE +
Sbjct: 241 KPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVV 300
Query: 297 SRKLYPDSCPPVXXXXXXXXXXXXX---XXYDVEGVEDDRN-VEVEEIKPRDVNLFNMGA 352
+R+LYP+SCPP+ YDVEG E +++ +VEE KP V + + +
Sbjct: 301 ARELYPESCPPLSSSSSLGSGSLLINDCSEYDVEGFEKEQHGFDVEERKPEIVMMHPLAS 360
Query: 353 MGRDRLMMTPPMVPQIKGELVET-NSDFIQKRKQPADQSHLMMDQKI-YTCEFPQCPYGD 410
G ++ P IK E+ T N +F +KRKQ D + ++MD+ YTCE QCP+
Sbjct: 361 FGVAKMQHFP-----IKEEVATTVNLEFTRKRKQNNDMNVMVMDRSAGYTCENGQCPHSK 415
Query: 411 YRLGFLERSSRNNHQLNCPYRHNSSQGFGMPNFQVNNDQTVAFSRP 456
LGF +RSSR+NHQ+ CPYR N +G F + + V +P
Sbjct: 416 MNLGFQDRSSRDNHQMVCPYRDNRL-AYGASKFHMGGMKLVVPQQP 460
|
|
| TAIR|locus:2091906 EIN3 "ETHYLENE-INSENSITIVE3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2027754 EIL3 "ETHYLENE-INSENSITIVE3-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2184088 AT5G10120 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178988 EIL2 "ETHYLENE-INSENSITIVE3-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171815 AT5G65100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00033938001 | SubName- Full=Chromosome undetermined scaffold_71, whole genome shotgun sequence; (600 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 542 | |||
| PLN03109 | 599 | PLN03109, PLN03109, ETHYLENE-INSENSITIVE3-like3 pr | 1e-163 | |
| pfam04873 | 332 | pfam04873, EIN3, Ethylene insensitive 3 | 1e-111 |
| >gnl|CDD|215581 PLN03109, PLN03109, ETHYLENE-INSENSITIVE3-like3 protein; Provisional | Back alignment and domain information |
|---|
Score = 477 bits (1229), Expect = e-163
Identities = 198/309 (64%), Positives = 241/309 (77%), Gaps = 12/309 (3%)
Query: 32 ETAAEEDYSDEEMDVDELERRMWRDRMLLKKLKEQSK--SKECVDSAKQRQSQEQARRKK 89
+ E D SDEE++ ++LERRMW+DR+ LK++KE+ K + ++ +K ++ +QARRKK
Sbjct: 25 DNLTENDVSDEEIEAEDLERRMWKDRIKLKRIKERQKKLQQAALEKSKPKKISDQARRKK 84
Query: 90 MSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAA 149
MSRAQDGILKYMLK+MEVCKA+GFVYGIIPEKGKPVSGASDN+RAWWKEKV+FD+NGPAA
Sbjct: 85 MSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAA 144
Query: 150 IAKYQADHAILGKNEDCGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVA 209
IAKY+A+ +G+ E S ++ HSLQ+LQD TLGSLLS+LMQHCDPPQR++PLEKGV
Sbjct: 145 IAKYEAECLAMGEAE--SSGNNSQHSLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVP 202
Query: 210 PPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVR 269
PPWWP+GNE+WW +LGLPK PPYKKPHDLKK WKV VLTAVIKHM PD KIR+ VR
Sbjct: 203 PPWWPSGNEDWWVKLGLPKGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDFDKIRRHVR 261
Query: 270 QSKCLQDKMTAKESATWLAVINQEEALSRKLYPDS-------CPPVSAGGSGSFIISDSS 322
QSKCLQDKMTAKES WL V+N+EE+L R+ D+ P IS S
Sbjct: 262 QSKCLQDKMTAKESLIWLGVLNREESLIRQPSSDNGTSGITETPRGGHEDRNKDAISSDS 321
Query: 323 DYDVEGVED 331
DYDV+G+ED
Sbjct: 322 DYDVDGLED 330
|
Length = 599 |
| >gnl|CDD|218302 pfam04873, EIN3, Ethylene insensitive 3 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 542 | |||
| PLN03109 | 599 | ETHYLENE-INSENSITIVE3-like3 protein; Provisional | 100.0 | |
| PF04873 | 354 | EIN3: Ethylene insensitive 3; InterPro: IPR006957 | 100.0 | |
| PF11001 | 126 | DUF2841: Protein of unknown function (DUF2841); In | 97.09 |
| >PLN03109 ETHYLENE-INSENSITIVE3-like3 protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-149 Score=1150.78 Aligned_cols=302 Identities=66% Similarity=1.119 Sum_probs=281.7
Q ss_pred ccccccccCCccCCCHHHHHHhhhhhhHhHHHhhhhccchhhh--hhhhccccHHHHHHhhhhhhhhhHHHHHHHHHHHH
Q 009140 31 QETAAEEDYSDEEMDVDELERRMWRDRMLLKKLKEQSKSKECV--DSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVC 108 (542)
Q Consensus 31 ~~~~~e~~~sdeei~~eeLerRmWkDr~~Lkrlke~~~~~~~~--~~~k~~~~~eqarRKkMsRAQDgILkyMlKmMEvC 108 (542)
.++++|+|+||||||+||||||||||||+||||||++|..+.. +..|+++++||||||||+|||||||||||||||||
T Consensus 24 c~~~~~~~~sdeei~~~el~rrmwkd~~~l~rlke~~~~~~~~~~e~~~~~~~~~~arrkkm~raqdgilkymlk~me~c 103 (599)
T PLN03109 24 CDNLTENDVSDEEIEAEDLERRMWKDRIKLKRIKERQKKLQQAALEKSKPKKISDQARRKKMSRAQDGILKYMLKLMEVC 103 (599)
T ss_pred cCCCcccccccccCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999998875544 36788999999999999999999999999999999
Q ss_pred hhccceeeecCCCCcccCCCChhhHHHHhhhhcccccchhhhhhhhhhhhccCCCCCCCCCCCCcchhhhcchhhhhhHH
Q 009140 109 KAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAILGKNEDCGSVVSTPHSLQELQDTTLGSLL 188 (542)
Q Consensus 109 ~AqGFVYGIIpekGKPvsGaSDnLR~WWKekVrFDrngPaAiaky~~~~~~~~~~~~~~~~~~~~h~L~dLqDtTLGSLL 188 (542)
|||||||||||||||||||||||||+|||||||||||||||||||++||++++.++.... +++|+|+|||||||||||
T Consensus 104 ~a~gfvygiipekgkpvsg~sd~lr~wwk~~v~fd~~gp~ai~ky~~~~~~~~~~~~~~~--~~~~~l~~lqd~tLgsll 181 (599)
T PLN03109 104 KARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMGEAESSGN--NSQHSLQDLQDATLGSLL 181 (599)
T ss_pred hhcceeEEeccCCCCCCCCCchHHHHHHHHhcccccccHHHHHHhhhhcccccccccCCc--ccHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988765553 899999999999999999
Q ss_pred HHhhhcCCCCccCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCcchhhhhhhhhhhhhhhccCcCHHHHHHHH
Q 009140 189 SALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLV 268 (542)
Q Consensus 189 SaLmqhC~PPQRrfPLekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkKPHdLKKawKV~VLtAVIKHmsPd~~kir~lV 268 (542)
|||||||+|||||||||||+||||||||+|+||+++|++++++ |||||||||||||||+|||||||||||||+|||+||
T Consensus 182 salmqhC~Ppqr~~plekg~~PPWWPtg~E~WW~~~g~~~~~~-pPykkphdLkK~wKv~vl~avikhmsPd~~kir~~v 260 (599)
T PLN03109 182 SSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLPKGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDFDKIRRHV 260 (599)
T ss_pred HHHHhhcCChhhcCCCCCCCCCCCCCCCCcchhhhcCCCCCCC-CCCCCchhhhhHHHHHHHHHHHHHhCccHHHHHHHH
Confidence 9999999999999999999999999999999999999999865 999999999999999999999999999999999999
Q ss_pred hhhccchhhhhhHhHhhHHHHHhhHHHHhhhcCCCCC-------CCCCCCCCCcccccCCCCccccCcccccch
Q 009140 269 RQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDSC-------PPVSAGGSGSFIISDSSDYDVEGVEDDRNV 335 (542)
Q Consensus 269 rqSkcLQdKmTakEs~tW~~vl~qEE~l~~~l~p~~~-------~p~s~~g~g~~~~~~~~eYDVdg~e~~~~~ 335 (542)
|||||||||||||||+||++||+|||+|++++..++. |..+.++....++|+++||||||+||.+..
T Consensus 261 r~Sk~lqdkmtakEs~~W~~vl~~Ee~~~~~~s~DNGtS~ITe~P~g~~~~rk~~~~SSdsdYDVDg~eD~~gS 334 (599)
T PLN03109 261 RQSKCLQDKMTAKESLIWLGVLNREESLIRQPSSDNGTSGITETPRGGHEDRNKDAISSDSDYDVDGLEDAPGS 334 (599)
T ss_pred HhchhHHhhhhHHHHHHHHHHHHHHHHHhcccCCCCCccccccCCCCccccCCCCCcCCCcccccccccCCCCC
Confidence 9999999999999999999999999999999877754 232345555678899999999999998763
|
|
| >PF04873 EIN3: Ethylene insensitive 3; InterPro: IPR006957 Ethylene insensitive 3 (EIN3) proteins are a family of plant DNA-binding proteins that regulate transcription in response to the gaseous plant hormone ethylene, and are essential for ethylene-mediated responses | Back alignment and domain information |
|---|
| >PF11001 DUF2841: Protein of unknown function (DUF2841); InterPro: IPR021264 This family of proteins with unknown function are all present in yeast | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 542 | ||||
| 1wij_A | 140 | Solution Structure Of The Dna-Binding Domain Of Eth | 1e-43 |
| >pdb|1WIJ|A Chain A, Solution Structure Of The Dna-Binding Domain Of Ethylene- Insensitive3-Like3 Length = 140 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 542 | |||
| 1wij_A | 140 | Ethylene-insensitive3-like 3 protein; DNA-binding | 2e-75 |
| >1wij_A Ethylene-insensitive3-like 3 protein; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.140.5.1 Length = 140 | Back alignment and structure |
|---|
Score = 234 bits (597), Expect = 2e-75
Identities = 98/139 (70%), Positives = 111/139 (79%), Gaps = 1/139 (0%)
Query: 166 CGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLG 225
+ LQ+LQD TLGSLLS+LMQHCDPPQR++PLEKG PPWWP GNEEWW +LG
Sbjct: 2 SSGSSGSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLG 61
Query: 226 LPKDLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESAT 285
LPK PPY+KPHDLKK WKV VLTAVI HM PDIAKI++ VRQSKCLQDKMTAKESA
Sbjct: 62 LPKS-QSPPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAI 120
Query: 286 WLAVINQEEALSRKLYPDS 304
WLAV+NQEE+L ++ P S
Sbjct: 121 WLAVLNQEESLIQQSGPSS 139
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 542 | |||
| 1wij_A | 140 | Ethylene-insensitive3-like 3 protein; DNA-binding | 100.0 |
| >1wij_A Ethylene-insensitive3-like 3 protein; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.140.5.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-82 Score=562.33 Aligned_cols=138 Identities=71% Similarity=1.235 Sum_probs=126.5
Q ss_pred CCCCCCCcchhhhcchhhhhhHHHHhhhcCCCCccCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCcchhhhh
Q 009140 166 CGSVVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAW 245 (542)
Q Consensus 166 ~~~~~~~~h~L~dLqDtTLGSLLSaLmqhC~PPQRrfPLekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkKPHdLKKaw 245 (542)
+++.++++|+|+||||||||||||||||||+|||||||||||+||||||||+|+||+++|++++|+ |||||||||||||
T Consensus 2 ~~~~~~~~h~L~~Lqd~TLgsllsaLmqhC~PPQR~~Plekg~~PPWWPtG~E~WW~~lGl~~~~~-PPYkkPhdLkKaw 80 (140)
T 1wij_A 2 SSGSSGSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMW 80 (140)
T ss_dssp ------CCCCSTTSCHHHHHHHHHHHSSSSSSCTTSCCTTTCCHHHHCCCSCCHHHHHHTCCTTCC-CCCCCGGGCCHHH
T ss_pred CccccccHHHHHHHHHHhHHHHHHHHHhhCCCchhcCCCCCCCCcCCCCCCCchhHHhcCCCCCCC-CCCCCchhhhHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred hhhhhhhhhhccCcCHHHHHHHHhhhccchhhhhhHhHhhHHHHHhhHHHHhhhcCCCC
Q 009140 246 KVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDS 304 (542)
Q Consensus 246 KV~VLtAVIKHmsPd~~kir~lVrqSkcLQdKmTakEs~tW~~vl~qEE~l~~~l~p~~ 304 (542)
||+|||||||||||||+|||+|||||||||||||||||+||++||||||+++++++|++
T Consensus 81 KV~VLtAVIKHmsPd~~kir~lVrqSk~lqdKmTakEs~~W~~vl~~Ee~~~~~~~p~~ 139 (140)
T 1wij_A 81 KVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQSGPSS 139 (140)
T ss_dssp HHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTTCCSHHHHHHHHHHTTTTTCSCC-----
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhhhhHHhhhhHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 542 | ||||
| d1wija_ | 127 | a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like | 5e-81 |
| >d1wija_ a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 127 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: LEM/SAP HeH motif superfamily: DNA-binding domain of EIN3-like family: DNA-binding domain of EIN3-like domain: Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 246 bits (630), Expect = 5e-81
Identities = 96/126 (76%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
Query: 174 HSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPP 233
LQ+LQD TLGSLLS+LMQHCDPPQR++PLEKG PPWWP GNEEWW +LGLPK P
Sbjct: 3 FVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKS-QSP 61
Query: 234 PYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQE 293
PY+KPHDLKK WKV VLTAVI HM PDIAKI++ VRQSKCLQDKMTAKESA WLAV+NQE
Sbjct: 62 PYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQE 121
Query: 294 EALSRK 299
E+L ++
Sbjct: 122 ESLIQQ 127
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 542 | |||
| d1wija_ | 127 | Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 | 100.0 |
| >d1wija_ a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: LEM/SAP HeH motif superfamily: DNA-binding domain of EIN3-like family: DNA-binding domain of EIN3-like domain: Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.1e-79 Score=539.07 Aligned_cols=127 Identities=76% Similarity=1.333 Sum_probs=124.4
Q ss_pred CcchhhhcchhhhhhHHHHhhhcCCCCccCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCcchhhhhhhhhhh
Q 009140 172 TPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPKDLGPPPYKKPHDLKKAWKVSVLT 251 (542)
Q Consensus 172 ~~h~L~dLqDtTLGSLLSaLmqhC~PPQRrfPLekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkKPHdLKKawKV~VLt 251 (542)
++|.|+||||||||||||||||||+|||||||||||+||||||||+|+||+++|++++++ |||||||||||||||+|||
T Consensus 1 ~~~~L~~LqD~TLgsllsaLmqhC~PPQR~~Plekg~pPPWWPtG~E~WW~~lg~~~~~~-PPYkkPhdLkKawKv~vL~ 79 (127)
T d1wija_ 1 SQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMWKVGVLT 79 (127)
T ss_dssp CCCCSTTSCHHHHHHHHHHHSSSSSSCTTSCCTTTCCHHHHCCCSCCHHHHHHTCCTTCC-CCCCCGGGCCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCCCcCCCCCCCchhHHhcCCCCCCC-CCCCChHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred hhhhccCcCHHHHHHHHhhhccchhhhhhHhHhhHHHHHhhHHHHhhh
Q 009140 252 AVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRK 299 (542)
Q Consensus 252 AVIKHmsPd~~kir~lVrqSkcLQdKmTakEs~tW~~vl~qEE~l~~~ 299 (542)
||||||||||+|||+|||||||||||||||||+||++||+|||+|+++
T Consensus 80 aVIKHmsPd~~kir~lVr~sk~lqdkmTakEs~~W~~vl~~Ee~l~~~ 127 (127)
T d1wija_ 80 AVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQ 127 (127)
T ss_dssp HHHHHTGGGHHHHHHTTTTSSSSTTTCCSHHHHHHHHHHTTTTTCSCC
T ss_pred HHHHHhCCcHHHHHHHHHHhHHHHHHHhHHHHHHHHHHHHhHHHHhcC
Confidence 999999999999999999999999999999999999999999999874
|