Citrus Sinensis ID: 009157

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540--
MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMVLPAITNRTCYVSYVIYL
cHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccEEEEccccccccccccccHHHHHHHHHHHHHHccccccccccEEEEccHHHHHHcccccccccccHHHHHHHHHcccccccccccEEEEEccccccEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccHHcHHHHHHHHHHHHHHccccccc
cHHHHHHcccccEEEcHHHHccccccccccEEEEEcccccccccccccccccccccHHHHHcccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccEEEEHHHHHHccccccccHHHHHHHHHHHHHHccccccccccEEEEEcccHHHHHHcccccccccccccHHEHHHcccccEEcccEEEEEEccccEEEEEEEEccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHccHcccccccHHHHHccccHHHccccccccccccccHHHHHHHHHHHHccccccccHcccHHHHHHHHHHHHHccEEEEc
MEEQAENRNkrklnidweevlpgrnddvpaelivkksgpptpaqksvpmsddpgsgeeldrqipdqELGVRIARMKDTYSkvrhclpdkgkKILATVTRLEKECERRrlagavpvcldidgcdkltqspssdcftqrtpspqiqskssFTSVFREKMEENRDCREANAFDKELSILAhcdrrkmrsdgdlsqrgrqnvrsssrkwpfhkgdksfnsngsqkdrasltcpshqsgensssclpkkkesfevlpsknprlrkeqnlvlldedespvedaseesegslhietTEQADEFAECMIdakiyypsrvdpesveicytdinhlapaayltspIMNFYIRYLQlqasptnrairdchfFNTYFYSKLKEAvshkggdkdsFFIKFRRWWKgvnifqksyvlipihedvHWSLVIICipdkedesgpiilhldslklhcSLSIFSNIRSFLKEEWNYLkqevspsdlpIAERIWQHlprriddriipvpqqkndydcgLFVLFFMERFMEEAPERLKKKDLAMVLPAITNRTCYVSYVIYL
meeqaenrnkrklnidweevlpgrnDDVPAELIVKksgpptpaqksvpmsddpgsgeeldrqipdqeLGVRIARMKdtyskvrhclpdkgkkilATVTRLEKEcerrrlagavpvcLDIDGCDKLTQSPSSDcftqrtpspqiqskssftSVFREKMEENrdcreanafdkelsilahcdrrkmrsdgdlsqrgrqnvrsssrkwpfhkgdksfnsngsqKDRASltcpshqsgensssclpkkkesfevlpsknprlrkeqnlvlldedespvedaseesegslhiETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEavshkggdkDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQevspsdlpIAERIWQHLPRRIDDriipvpqqkndyDCGLFVLFFMERFMEEAPERlkkkdlamvlpaitnrtcYVSYVIYL
MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMVLPAITNRTCYVSYVIYL
********************************************************************GVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKL*************************************************************************************************************************************************************************EFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMVLPAITNRTCYVSYVIY*
*******************V****************************************************************************************************************************************************************************************************************************************************************************************IDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH**GD**SFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSL*****LSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMVLPAITNRTCYVSYVIYL
**********RKLNIDWEEVLPGRNDDVPAELIVKKSG*********************DRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQS*******************SFTSVFREKMEENRDCREANAFDKELSILAHCDRR**********************WPFHKGDKSF***************************PKKKESFEVLPSKNPRLRKEQNLVLLD******************IETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMVLPAITNRTCYVSYVIYL
*********KRKLNIDWEEVLPGRNDDVPAELIVKKS********************ELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGA***************************************************************************************************************************************************************************SLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMVLPAITNRTCYVSYVIYL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEEQAENRNKRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQSGENSSSCLPKKKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMVLPAITNRTCYVSYVIYL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query542 2.2.26 [Sep-21-2011]
Q2PS26584 Ubiquitin-like-specific p yes no 0.898 0.833 0.395 9e-98
Q8RWN0571 Ubiquitin-like-specific p no no 0.872 0.828 0.369 8e-84
Q8L7S0 931 Probable ubiquitin-like-s no no 0.367 0.213 0.298 4e-24
Q0WKV8 774 Probable ubiquitin-like-s no no 0.398 0.279 0.302 1e-22
O13769638 Ubiquitin-like-specific p yes no 0.348 0.296 0.294 1e-19
Q96HI0755 Sentrin-specific protease yes no 0.326 0.234 0.305 3e-16
Q8WP32755 Sentrin-specific protease N/A no 0.326 0.234 0.305 3e-16
Q6NXL6749 Sentrin-specific protease no no 0.326 0.236 0.309 5e-16
Q94F30489 Ubiquitin-like-specific p no no 0.311 0.345 0.286 5e-15
Q9HC62589 Sentrin-specific protease no no 0.302 0.278 0.307 1e-14
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana GN=ULP1D PE=1 SV=1 Back     alignment and function desciption
 Score =  358 bits (918), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 223/564 (39%), Positives = 314/564 (55%), Gaps = 77/564 (13%)

Query: 10  KRKLNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEELDRQIPDQELG 69
           K+   IDW   +  + D+VP EL +  +  PTP       SDD     +L   + D++L 
Sbjct: 16  KKDFVIDWSSAM-DKEDEVP-ELEIVNTTKPTPPPPPTFFSDDQTDSPKL---LTDRDLD 70

Query: 70  VRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGA----------------- 112
            ++ R K   + +   LPDKG+KI   +  LE+E +RR L G+                 
Sbjct: 71  EQLERKKAILT-LGPGLPDKGEKIRLKIADLEEEKQRRVLEGSKMEVDRSSKVVSSTSSG 129

Query: 113 ---VPVCLDIDGCDKLTQSPSSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAF 169
              +P    +        + S D   Q     +  S+S+F++VF +      D +   AF
Sbjct: 130 SDVLPQGNAVSKDTSRGNADSKDTSRQGNADSKEVSRSTFSAVFSKP---KTDSQSKKAF 186

Query: 170 DKELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKW--------------PFHKGDKSFN 215
            KEL  L  C+RRK ++       GR+ V   S  W               F  G K   
Sbjct: 187 GKELEDLG-CERRKHKA-------GRKPVTRLSNGWRLLPDVGKAEHSAKQFDSGLKESK 238

Query: 216 SNGSQKDRASLTCPSHQSG---------------ENSSSCLPKKKESFEVLPSKNPRLRK 260
            N   K+      P   S                 ++S     ++ S+E  PS++ R RK
Sbjct: 239 GNKKSKEPYGKKRPMESSTYSLIDDDDDDDDDDDNDTSGHETPREWSWEKSPSQSSRRRK 298

Query: 261 EQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICY 320
           +    +++ DE       EE++ S      EQA E  E + +  I YP+R DP  V++C 
Sbjct: 299 KSEDTVINVDE-------EEAQPST---VAEQAAELPEGLQE-DICYPTRDDPHFVQVCL 347

Query: 321 TDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDK 380
            D+  LAP  YLTSP+MNFY+R+LQ Q S +N+   DCHFFNTYFY KL +AV++KG DK
Sbjct: 348 KDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFNTYFYKKLSDAVTYKGNDK 407

Query: 381 DSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHC 440
           D+FF++FRRWWKG+++F+K+Y+ IPIHED+HWSLVI+CIPDK+DESG  ILHLDSL LH 
Sbjct: 408 DAFFVRFRRWWKGIDLFRKAYIFIPIHEDLHWSLVIVCIPDKKDESGLTILHLDSLGLHS 467

Query: 441 SLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGL 500
             SI  N++ FLK+EWNYL Q+    DLPI+E++W++LPRRI + ++ VPQQKND+DCG 
Sbjct: 468 RKSIVENVKRFLKDEWNYLNQDDYSLDLPISEKVWKNLPRRISEAVVQVPQQKNDFDCGP 527

Query: 501 FVLFFMERFMEEAPERLKKKDLAM 524
           FVLFF++RF+EEAP+RLK+KDL M
Sbjct: 528 FVLFFIKRFIEEAPQRLKRKDLGM 551
Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. Cleaves precursors of SUM1 and SUM2, but not of SUM3 or SUM5. Able to release SUM1 and SUM2 from conjugates, but unable to cleave SUM3. Protease activity mainly directed at deconjugating SUM1 and SUM2 from their target proteins. Regulates salt stress responses and flowering time. Redundant with ULP1C.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: 6EC: 8
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana GN=ULP1C PE=1 SV=1 Back     alignment and function description
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis thaliana GN=ULP2B PE=2 SV=3 Back     alignment and function description
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis thaliana GN=ULP2A PE=2 SV=2 Back     alignment and function description
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2 Back     alignment and function description
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3 Back     alignment and function description
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2 SV=1 Back     alignment and function description
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1 Back     alignment and function description
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana GN=ESD4 PE=1 SV=1 Back     alignment and function description
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query542
356524061594 PREDICTED: LOW QUALITY PROTEIN: ubiquiti 0.929 0.848 0.470 1e-113
356565950586 PREDICTED: ubiquitin-like-specific prote 0.857 0.793 0.493 1e-111
255568770283 sentrin/sumo-specific protease, putative 0.431 0.826 0.790 1e-110
145336892584 ubiquitin-like-specific protease 1D [Ara 0.898 0.833 0.395 6e-96
297840529593 cysteine-type peptidase [Arabidopsis lyr 0.896 0.819 0.391 7e-93
297843874569 Ulp1 protease family protein [Arabidopsi 0.880 0.838 0.372 5e-83
42571423570 ubiquitin-like-specific protease 1C [Ara 0.870 0.828 0.370 4e-82
22329476571 ubiquitin-like-specific protease 1C [Ara 0.872 0.828 0.369 5e-82
3249071547 Contains similarity to protein-tyrosine 0.859 0.851 0.375 5e-81
296086553221 unnamed protein product [Vitis vinifera] 0.339 0.832 0.760 3e-80
>gi|356524061|ref|XP_003530651.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-like-specific protease 1D-like [Glycine max] Back     alignment and taxonomy information
 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/540 (47%), Positives = 331/540 (61%), Gaps = 36/540 (6%)

Query: 1   MEEQAENRNKRK--LNIDWEEVLPGRNDDVPAELIVKKSGPPTPAQKSVPMSDDPGSGEE 58
           MEEQ   + K K  L IDW      ++D  P +  +       PA  S    D       
Sbjct: 1   MEEQQRQQQKPKSPLPIDWSRQF--QSDSPPRDYDI------LPASSSADQDDLSA---- 48

Query: 59  LDRQIPDQELGVRIARMKDTYSKVRHCLPDKGKKILATVTRLEKECERRRLAGAVPVCLD 118
               IPD +L   I   K T       LPDKG K+ AT+ R ++E   R     +    D
Sbjct: 49  ----IPDHKLRESIQSKKRTLDVTGKNLPDKGTKLRATIDRYQQELTHREQQKRLRQEDD 104

Query: 119 IDGCDKLTQSPSSDCFTQRTPS--------PQIQSKSSFTSVFREKMEENRDCREANAFD 170
            D   +  Q+ S+D  T+   +         Q QS+S+FTS F ++ME+N +C  ++AF 
Sbjct: 105 KDRKPQPGQASSTDAVTEGVSNDLREENLLSQAQSQSTFTSCFVKQMEDNTNCTASDAFR 164

Query: 171 KELSILAHCDRRKMRSDGDLSQRGRQNVRSSSRKW--PFHKGDKSFNSNGSQKDRASLTC 228
           KE+S+  H D +K++  G+  +R R    S   ++  P     ++  S+G +  RA+ + 
Sbjct: 165 KEMSLFKHSDYQKIQDKGEPRRRKRHRSSSRQLQFQCPSKLSKRNTFSDG-KTCRATSSF 223

Query: 229 PSHQSGENSSSCLPK---KKESFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSL 285
               +G N   C PK   +K++F+ +     R RK   +VL  +D+   ++  E  +   
Sbjct: 224 GLRNNGRNLPRCYPKVHGRKDAFQAIQLDGSRSRKGLPIVLDVDDDDGGDNNDEYDDDEA 283

Query: 286 HI-ETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYL 344
           HI E TE  ++F E + +AKIY+PSR DPE VEIC+TD N LAP  YLTS IMNFYI+YL
Sbjct: 284 HIVEKTE--NKFPEYLKEAKIYFPSRDDPECVEICFTDTNCLAPEGYLTSTIMNFYIQYL 341

Query: 345 QLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLI 404
           Q QA  TNR++   HFFNTYFY KLKEAVS+K  D +  F KFRRWWKGVNIFQK+YVLI
Sbjct: 342 QQQALLTNRSLSAYHFFNTYFYKKLKEAVSYKQSDXE-IFAKFRRWWKGVNIFQKAYVLI 400

Query: 405 PIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVS 464
           PIHED+HWSL+IICIPDKEDESGPIILHLDSL LH S S+F NI+S+L EE NY+ +E  
Sbjct: 401 PIHEDLHWSLIIICIPDKEDESGPIILHLDSLGLHSSKSVFDNIKSYLIEEKNYMDREDM 460

Query: 465 PSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAM 524
            SD+ IA+RIW+ LPRRI+ +II VPQQKNDYDCGLFVL+F+ERFMEEAPERLK KDL M
Sbjct: 461 ASDVSIADRIWKCLPRRIESQIIQVPQQKNDYDCGLFVLYFIERFMEEAPERLKMKDLDM 520

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356565950|ref|XP_003551198.1| PREDICTED: ubiquitin-like-specific protease 1D-like [Glycine max] Back     alignment and taxonomy information
>gi|255568770|ref|XP_002525356.1| sentrin/sumo-specific protease, putative [Ricinus communis] gi|223535319|gb|EEF36994.1| sentrin/sumo-specific protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|145336892|ref|NP_176228.3| ubiquitin-like-specific protease 1D [Arabidopsis thaliana] gi|122202545|sp|Q2PS26.1|ULP1D_ARATH RecName: Full=Ubiquitin-like-specific protease 1D; AltName: Full=Protein OVERLY TOLERANT TO SALT 1 gi|83316254|gb|ABC02400.1| SUMO isopeptidase [Arabidopsis thaliana] gi|332195546|gb|AEE33667.1| ubiquitin-like-specific protease 1D [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297840529|ref|XP_002888146.1| cysteine-type peptidase [Arabidopsis lyrata subsp. lyrata] gi|297333987|gb|EFH64405.1| cysteine-type peptidase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297843874|ref|XP_002889818.1| Ulp1 protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297335660|gb|EFH66077.1| Ulp1 protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42571423|ref|NP_973802.1| ubiquitin-like-specific protease 1C [Arabidopsis thaliana] gi|332190475|gb|AEE28596.1| ubiquitin-like-specific protease 1C [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|22329476|ref|NP_172527.2| ubiquitin-like-specific protease 1C [Arabidopsis thaliana] gi|75158722|sp|Q8RWN0.1|ULP1C_ARATH RecName: Full=Ubiquitin-like-specific protease 1C; AltName: Full=Protein OVERLY TOLERANT TO SALT 2 gi|20260164|gb|AAM12980.1| similar to protein-tyrosine phosphatase 2 [Arabidopsis thaliana] gi|22136240|gb|AAM91198.1| similar to protein-tyrosine phosphatase 2 [Arabidopsis thaliana] gi|332190474|gb|AEE28595.1| ubiquitin-like-specific protease 1C [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|3249071|gb|AAC24055.1| Contains similarity to protein-tyrosine phosphatase 2 gb|L15420 from Dictyostelium discoideum. EST gb|N38718 comes from this g [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|296086553|emb|CBI32142.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query542
TAIR|locus:2195598584 ULP1D "UB-like protease 1D" [A 0.701 0.650 0.453 4.7e-87
TAIR|locus:2194574571 OTS2 "OVERLY TOLERANT TO SALT 0.481 0.457 0.514 1.7e-84
ZFIN|ZDB-GENE-070912-345991 si:dkey-100n23.3 "si:dkey-100n 0.217 0.119 0.293 5.9e-19
DICTYBASE|DDB_G0289557 778 DDB_G0289557 "peptidase C48 fa 0.343 0.239 0.333 1.1e-18
RGD|13055101037 Senp7 "SUMO1/sentrin specific 0.267 0.139 0.261 1e-16
UNIPROTKB|Q9BQF61050 SENP7 "Sentrin-specific protea 0.267 0.138 0.261 5.4e-16
UNIPROTKB|J3QT09985 SENP7 "Sentrin-specific protea 0.267 0.147 0.261 1.4e-15
DICTYBASE|DDB_G0293508 1035 DDB_G0293508 [Dictyostelium di 0.352 0.184 0.327 1.1e-14
ZFIN|ZDB-GENE-080204-25 1035 senp6a "SUMO1/sentrin specific 0.217 0.114 0.296 5.8e-14
MGI|MGI:19135651037 Senp7 "SUMO1/sentrin specific 0.265 0.138 0.272 1.2e-13
TAIR|locus:2195598 ULP1D "UB-like protease 1D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
 Identities = 189/417 (45%), Positives = 259/417 (62%)

Query:   130 SSDCFTQRTPSPQIQSKSSFTSVFREKMEENRDCREANAFDKELSILAHCDRRKMRSDGD 189
             S D   Q     +  S+S+F++VF +      D +   AF KEL  L  C+RRK ++   
Sbjct:   150 SKDTSRQGNADSKEVSRSTFSAVFSKP---KTDSQSKKAFGKELEDLG-CERRKHKAGRK 205

Query:   190 ----LSQRGR--QNV-RSSSRKWPFHKGDKSFNSNGSQKDRASLTCPSHQS--------- 233
                 LS   R   +V ++      F  G K    N   K+      P   S         
Sbjct:   206 PVTRLSNGWRLLPDVGKAEHSAKQFDSGLKESKGNKKSKEPYGKKRPMESSTYSLIDDDD 265

Query:   234 -----GENSSSCLPKKKE-SFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHI 287
                   +N +S     +E S+E  PS++ R RK+    +++ DE       EE++ S   
Sbjct:   266 DDDDDDDNDTSGHETPREWSWEKSPSQSSRRRKKSEDTVINVDE-------EEAQPST-- 316

Query:   288 ETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQ 347
                EQA E  E + +  I YP+R DP  V++C  D+  LAP  YLTSP+MNFY+R+LQ Q
Sbjct:   317 -VAEQAAELPEGLQE-DICYPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMRFLQQQ 374

Query:   348 ASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIH 407
              S +N+   DCHFFNTYFY KL +AV++KG DKD+FF++FRRWWKG+++F+K+Y+ IPIH
Sbjct:   375 ISSSNQISADCHFFNTYFYKKLSDAVTYKGNDKDAFFVRFRRWWKGIDLFRKAYIFIPIH 434

Query:   408 EDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSD 467
             ED+HWSLVI+CIPDK+DESG  ILHLDSL LH   SI  N++ FLK+EWNYL Q+    D
Sbjct:   435 EDLHWSLVIVCIPDKKDESGLTILHLDSLGLHSRKSIVENVKRFLKDEWNYLNQDDYSLD 494

Query:   468 LPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAM 524
             LPI+E++W++LPRRI + ++ VPQQKND+DCG FVLFF++RF+EEAP+RLK+KDL M
Sbjct:   495 LPISEKVWKNLPRRISEAVVQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGM 551
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
GO:0016926 "protein desumoylation" evidence=RCA;IDA
GO:0016929 "SUMO-specific protease activity" evidence=IDA
GO:0009651 "response to salt stress" evidence=IGI
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IGI;RCA
GO:0007155 "cell adhesion" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2194574 OTS2 "OVERLY TOLERANT TO SALT 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070912-345 si:dkey-100n23.3 "si:dkey-100n23.3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0289557 DDB_G0289557 "peptidase C48 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
RGD|1305510 Senp7 "SUMO1/sentrin specific peptidase 7" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BQF6 SENP7 "Sentrin-specific protease 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J3QT09 SENP7 "Sentrin-specific protease 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0293508 DDB_G0293508 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080204-25 senp6a "SUMO1/sentrin specific peptidase 6a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1913565 Senp7 "SUMO1/sentrin specific peptidase 7" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q2PS26ULP1D_ARATH3, ., 4, ., 2, 2, ., 6, 80.39530.89850.8339yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.691
3rd Layer3.4.22.68LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ULP1D
ULP1D (UB-LIKE PROTEASE 1D); SUMO-specific protease/ cysteine-type peptidase; Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity- it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP-OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S-OTS1 increases salt tolerance and reduce [...] (584 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT5G60190
Ulp1 protease family protein; Encodes a protein that can cleave residues from the C-terminus of [...] (226 aa)
      • 0.867
SUMO2
SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag; Encodes a small ubiquit [...] (116 aa)
      • 0.790
SUMO1
SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag; Encodes a small ubiquit [...] (100 aa)
      • 0.790
SUMO3
SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3); protein binding / protein tag; Encodes a small ubiquit [...] (111 aa)
      • 0.784
SUMO5
SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5); protein tag; Encodes a small ubiquitin-like modifier [...] (108 aa)
      • 0.784
SIZ1
SIZ1; DNA binding / SUMO ligase; Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase [...] (885 aa)
      • 0.679
SCE1
SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase; Encodes a SUMO liagse that directs the attachmen [...] (160 aa)
      • 0.657
AT4G25600
ShTK domain-containing protein; ShTK domain-containing protein; FUNCTIONS IN- oxidoreductase ac [...] (291 aa)
      • 0.623
AT2G12100
transposable element gene; similar to unknown protein [Arabidopsis thaliana] (TAIR-AT5G28480.1) [...] (1224 aa)
      • 0.591
SAE2
SAE2 (SUMO-ACTIVATING ENZYME 2); SUMO activating enzyme; Encodes one of the two subunits of the [...] (700 aa)
      • 0.534

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
pfam02902216 pfam02902, Peptidase_C48, Ulp1 protease family, C- 1e-36
COG5160578 COG5160, ULP1, Protease, Ulp1 family [Posttranslat 4e-28
PLN03189490 PLN03189, PLN03189, Protease specific for SMALL UB 8e-13
>gnl|CDD|217278 pfam02902, Peptidase_C48, Ulp1 protease family, C-terminal catalytic domain Back     alignment and domain information 
 Score =  135 bits (341), Expect = 1e-36
 Identities = 59/206 (28%), Positives = 85/206 (41%), Gaps = 38/206 (18%)

Query: 331 YLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAV----------SHKGGDK 380
           +L   +++FY++ L  +    +      HF N++FYSKL +            S K G K
Sbjct: 2   WLNDTVIDFYLKLLAHRLESEDYKNERVHFLNSFFYSKLTKLFPDFKKCKSKKSFKWGKK 61

Query: 381 DSFFIKFRRWWKGVN---IFQKSYVLIPIHED-VHWSLVIICIPDKEDESGPIILHLDSL 436
             F+   RRW + VN   +F    + IPI+ D  HW L+II +P K       I  LDSL
Sbjct: 62  KDFYNGVRRWTRKVNKKWLFDVDIIYIPINWDGKHWVLLIINLPKKT------ITILDSL 115

Query: 437 KLH------CSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVP 490
                      +    N+  +L  E    +Q+               L      R+  VP
Sbjct: 116 ISLHTEAVKKRIRPIDNMLPYLMSEALKKEQDDP------------DLTPFEIKRLTKVP 163

Query: 491 QQKNDYDCGLFVLFFMERFMEEAPER 516
           QQ N  DCG +VL F+E   E  P  
Sbjct: 164 QQPNSGDCGPYVLKFIELLAEGVPFE 189

This domain contains the catalytic triad Cys-His-Asn. Length = 216
>gnl|CDD|227489 COG5160, ULP1, Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|215622 PLN03189, PLN03189, Protease specific for SMALL UBIQUITIN-RELATED MODIFIER (SUMO); Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 542
KOG0778511 consensus Protease, Ulp1 family [Posttranslational 100.0
PLN03189490 Protease specific for SMALL UBIQUITIN-RELATED MODI 100.0
COG5160578 ULP1 Protease, Ulp1 family [Posttranslational modi 100.0
PF02902216 Peptidase_C48: Ulp1 protease family, C-terminal ca 99.97
KOG3246223 consensus Sentrin-specific cysteine protease (Ulp1 99.93
KOG0779595 consensus Protease, Ulp1 family [Posttranslational 99.93
PF03290423 Peptidase_C57: Vaccinia virus I7 processing peptid 97.06
PRK14848317 deubiquitinase SseL; Provisional 95.94
PRK11836403 deubiquitinase; Provisional 95.74
PF00770183 Peptidase_C5: Adenovirus endoprotease; InterPro: I 93.17
PRK15371287 effector protein YopJ; Provisional 90.93
PF15328223 GCOM2: Putative GRINL1B complex locus protein 2 90.38
PF03421177 YopJ: YopJ Serine/Threonine acetyltransferase; Int 87.83
>KOG0778 consensus Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1e-49  Score=424.56  Aligned_cols=222  Identities=26%  Similarity=0.484  Sum_probs=189.2

Q ss_pred             cCCCCccchHHHHHHHHhhcC---CeeecCCCCCCCceEEecccccccCCCCccCHHHHHHHHHHHHHhcCCCCcCCCce
Q 009157          282 EGSLHIETTEQADEFAECMID---AKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDC  358 (542)
Q Consensus       282 ~~~~~~~~~e~~~e~~~~~~~---~~i~yP~~~~~~~i~Lt~~DL~~L~~~~WLND~IInfyl~~L~~~~~~~~~~~~~v  358 (542)
                      +..+++++.+...++.+.+.+   ..+..    ..+++.||.+||.||.+++||||+||||||++|.++.....+ .+++
T Consensus       285 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~i~It~~dl~tl~~~~WLNDevINfYm~ll~ers~~~~~-yp~~  359 (511)
T KOG0778|consen  285 EDSFPPLTEEREAQVQRAFSSRNSTEILV----THFNIDITGKDLQTLRPGNWLNDEVINFYMELLKERSKKDSK-YPKV  359 (511)
T ss_pred             ccccccccHHHHHHHHHHhccCCccccee----hhccccccHHHHhhccCccchhHHHHHHHHHHHHhhccccCC-CceE
Confidence            445677776666666665542   22221    246799999999999999999999999999999999877655 8899


Q ss_pred             EEEchhhHHHHHHhhhcCCCCchhhhHHHHhhhccccCCCCCEEEEEeecCCceEEEEEEcCCCCCCCCCeEEEEcCCCC
Q 009157          359 HFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKL  438 (542)
Q Consensus       359 ~~fnTfFy~kL~~~~~~kg~d~~~~f~~vkrWtk~vdIf~kd~IfIPIn~~~HWsLvVId~~~k~~~~~~~I~~yDSL~~  438 (542)
                      |+||||||++|..          .+|.+|+|||+++|||++|+||||||.+.||+|+||++.++      +|.|||||++
T Consensus       360 h~FnTFFy~kL~~----------~gy~~VkRWTk~v~if~~d~i~vPIH~~vHW~l~vid~r~k------~i~y~DS~~~  423 (511)
T KOG0778|consen  360 HAFNTFFYTKLVG----------RGYAGVKRWTKKVDIFDKDIIFVPIHLGVHWCLAVIDLREK------TIEYYDSLGG  423 (511)
T ss_pred             EEEechhhhhhhh----------cchHHHHhHhhccCccccceeEeeeecCceEEEEEEEcccc------eEEEeeccCC
Confidence            9999999999986          25899999999999999999999999999999999999998      9999999997


Q ss_pred             CCcHHHHHHHHHHHHHHHHHhhccCCCCCCcccccccccCCccccccCCCcCCCCCCCChHHHHHHHHHHHhhhCCCCCC
Q 009157          439 HCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLK  518 (542)
Q Consensus       439 ~~~k~v~~~L~~~L~~e~~~~~~~~~~~Dl~~~~~~Wk~lp~~i~~~~~~vPqQ~Ng~DCGVFVL~yae~~~~~~p~~ft  518 (542)
                      ..++ ++.+|..||.+|+..+.+.    ++  +-..|...      ...++|||.||+|||+|+|+|++|++++.|..||
T Consensus       424 ~~nr-~~~aL~~Yl~~E~~~k~~~----~~--d~s~w~~~------~~~~iP~Q~Ng~DCG~f~c~~~~~~s~~~p~~ft  490 (511)
T KOG0778|consen  424 GPNR-ICDALAKYLQDESRDKSKK----DF--DVSGWTIE------FVQNIPQQRNGSDCGMFVCKYADYISRDVPLTFT  490 (511)
T ss_pred             CCcc-hHHHHHHHHHHHHhhhhcC----CC--Cccchhhh------hhhccccccCCCccceEEeeechhhccCCCcccC
Confidence            7654 4499999999999775432    32  23578752      3458999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHhcC
Q 009157          519 KKDLAMVLPAITNRTCYVS  537 (542)
Q Consensus       519 q~dm~~fR~~i~~~ll~~~  537 (542)
                      |+||+.||++|+++||+.-
T Consensus       491 q~dmp~fR~~m~~eI~~~~  509 (511)
T KOG0778|consen  491 QQDMPYFRKKMAKEILHLK  509 (511)
T ss_pred             hhhhHHHHHHHHHHHHhhh
Confidence            9999999999999999864

>PLN03189 Protease specific for SMALL UBIQUITIN-RELATED MODIFIER (SUMO); Provisional Back     alignment and domain information
>COG5160 ULP1 Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF02902 Peptidase_C48: Ulp1 protease family, C-terminal catalytic domain This family belongs to family C48 of the peptidase classification Back     alignment and domain information
>KOG3246 consensus Sentrin-specific cysteine protease (Ulp1 family) [General function prediction only] Back     alignment and domain information
>KOG0779 consensus Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03290 Peptidase_C57: Vaccinia virus I7 processing peptidase; InterPro: IPR004970 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK14848 deubiquitinase SseL; Provisional Back     alignment and domain information
>PRK11836 deubiquitinase; Provisional Back     alignment and domain information
>PF00770 Peptidase_C5: Adenovirus endoprotease; InterPro: IPR000855 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK15371 effector protein YopJ; Provisional Back     alignment and domain information
>PF15328 GCOM2: Putative GRINL1B complex locus protein 2 Back     alignment and domain information
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
1tgz_A226 Structure Of Human Senp2 In Complex With Sumo-1 Len 1e-13
2io0_A232 Crystal Structure Of Human Senp2 In Complex With Pr 9e-13
3eay_A323 Crystal Structure Of The Human Senp7 Catalytic Doma 7e-12
2xph_A238 Crystal Structure Of Human Senp1 With The Bound Cob 2e-11
2xre_A230 Detection Of Cobalt In Previously Unassigned Human 4e-11
2iyc_A226 Senp1 Native Structure Length = 226 5e-11
2ckg_A225 The Structure Of Senp1 Sumo-2 Co-Complex Suggests A 1e-10
2iy0_A226 Senp1 (Mutant) Sumo1 Rangap Length = 226 6e-10
2g4d_A205 Crystal Structure Of Human Senp1 Mutant (C603s) In 2e-09
1euv_A221 X-Ray Structure Of The C-Terminal Ulp1 Protease Dom 6e-08
2hkp_A221 Sumo Protease Ulp1 With The Catalytic Cysteine Oxid 1e-06
>pdb|1TGZ|A Chain A, Structure Of Human Senp2 In Complex With Sumo-1 Length = 226 Back     alignment and structure 
Iteration: 1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 41/205 (20%)
Query: 316 VEICYTDINHLAPAAYLTSPIMNFYIRYL----QLQASPTNRAIRDCHFFNTYFYSKLKE 371
           + I   DI  L    +L   ++NFY+  L    + Q  P        H F+T+FY KLK 
Sbjct: 32  LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPA------LHVFSTFFYPKLKS 85
Query: 372 AVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIIL 431
                GG     +   +RW KGVN+F++  +L+PIH  VHWSLV+I      D     + 
Sbjct: 86  -----GG-----YQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVI------DLRKKCLK 129
Query: 432 HLDSL--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 489
           +LDS+  K H    I   +  +L++E     +    SDL + E  W H   +  +    +
Sbjct: 130 YLDSMGQKGH---RICEILLQYLQDE----SKTKRNSDLNLLE--WTHHSMKPHE----I 176
Query: 490 PQQKNDYDCGLFVLFFMERFMEEAP 514
           PQQ N  DCG+F   + +    + P
Sbjct: 177 PQQLNGSDCGMFTCKYADYISRDKP 201
>pdb|2IO0|A Chain A, Crystal Structure Of Human Senp2 In Complex With Presumo-2 Length = 232 Back     alignment and structure
>pdb|3EAY|A Chain A, Crystal Structure Of The Human Senp7 Catalytic Domain Length = 323 Back     alignment and structure
>pdb|2XPH|A Chain A, Crystal Structure Of Human Senp1 With The Bound Cobalt Length = 238 Back     alignment and structure
>pdb|2XRE|A Chain A, Detection Of Cobalt In Previously Unassigned Human Senp1 Structure Length = 230 Back     alignment and structure
>pdb|2IYC|A Chain A, Senp1 Native Structure Length = 226 Back     alignment and structure
>pdb|2CKG|A Chain A, The Structure Of Senp1 Sumo-2 Co-Complex Suggests A Structural Basis For Discrimination Between Sumo Paralogues During Processing Length = 225 Back     alignment and structure
>pdb|2IY0|A Chain A, Senp1 (Mutant) Sumo1 Rangap Length = 226 Back     alignment and structure
>pdb|2G4D|A Chain A, Crystal Structure Of Human Senp1 Mutant (C603s) In Complex With Sumo-1 Length = 205 Back     alignment and structure
>pdb|1EUV|A Chain A, X-Ray Structure Of The C-Terminal Ulp1 Protease Domain In Complex With Smt3, The Yeast Ortholog Of Sumo Length = 221 Back     alignment and structure
>pdb|2HKP|A Chain A, Sumo Protease Ulp1 With The Catalytic Cysteine Oxidized To A Sulfenic Acid Length = 221 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query542
2xph_A238 Sentrin-specific protease 1; hydrolase, cysteine p 3e-34
1th0_A226 SMT3-, sentrin-specific protease 2; SUMO, AXAM, SE 3e-30
1euv_A221 ULP1 protease; SUMO hydrolase, ubiquitin-like prot 8e-29
3eay_A323 Sentrin-specific protease 7; ULP, SENP, SUMO, ubiq 9e-29
2bkr_A212 Sentrin-specific protease 8; protein-binding-hydro 1e-22
2oix_A186 Xanthomonas outer protein D; CLAN CE family 48 cys 9e-20
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
>2xph_A Sentrin-specific protease 1; hydrolase, cysteine protease, thiol protease; 2.40A {Homo sapiens} PDB: 2xre_A 2iyc_A 2iyd_A 2iy1_A 2iy0_A 2ckg_A 2ckh_A 2g4d_A Length = 238 Back     alignment and structure
 Score =  128 bits (323), Expect = 3e-34
 Identities = 57/252 (22%), Positives = 97/252 (38%), Gaps = 30/252 (11%)

Query: 273 PVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYL 332
            + D   +SE      T E   E      +         +   + I   DI  L    +L
Sbjct: 2   AMADIGSDSEDEFPEITEEMEKEIKNVFRNGNQDEV-LSEAFRLTITRKDIQTLNHLNWL 60

Query: 333 TSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWK 392
              I+NFY+  L  ++          H FNT+F++KLK A           +   +RW K
Sbjct: 61  NDEIINFYMNMLMERSKEKGL--PSVHAFNTFFFTKLKTA----------GYQAVKRWTK 108

Query: 393 GVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFL 452
            V++F    +L+PIH  VHW L ++    K       I + DS+    +      +  +L
Sbjct: 109 KVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDSMGGINN-EACRILLQYL 161

Query: 453 KEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEE 512
           K+E    K++            WQ   ++  +     PQQ N  DCG+F   + +   ++
Sbjct: 162 KQESIDKKRK------EFDTNGWQLFSKKSQEI----PQQMNGSDCGMFACKYADCITKD 211

Query: 513 APERLKKKDLAM 524
            P    ++ +  
Sbjct: 212 RPINFTQQHMPY 223
>1th0_A SMT3-, sentrin-specific protease 2; SUMO, AXAM, SENP, ULP, cell cycle, hydrolase; 2.20A {Homo sapiens} SCOP: d.3.1.7 PDB: 1tgz_A 2io0_A 2io1_A 2io2_A 2io3_A Length = 226 Back     alignment and structure
>1euv_A ULP1 protease; SUMO hydrolase, ubiquitin-like protease 1, SMT3 hydrolase desumoylating enzyme, cysteine protease; 1.60A {Saccharomyces cerevisiae} SCOP: d.3.1.7 PDB: 2hkp_A 2hl8_A 2hl9_A Length = 221 Back     alignment and structure
>3eay_A Sentrin-specific protease 7; ULP, SENP, SUMO, ubiquitin, crystal, alternative splicing, hydrolase, phosphoprotein, polymorphism, thiol protease; 2.40A {Homo sapiens} Length = 323 Back     alignment and structure
>2bkr_A Sentrin-specific protease 8; protein-binding-hydrolase complex, ubiquitin, hydrolase, Pro thiol protease, UBL conjugation pathway, ubiquitin/hydrolas complex; 1.90A {Homo sapiens} SCOP: d.3.1.7 PDB: 2bkq_A 1xt9_A Length = 212 Back     alignment and structure
>2oix_A Xanthomonas outer protein D; CLAN CE family 48 cysteine protease, type III secreted effec desumoylating enzyme; 1.80A {Xanthomonas euvesicatoria} PDB: 2oiv_A Length = 186 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query542
3eay_A323 Sentrin-specific protease 7; ULP, SENP, SUMO, ubiq 100.0
1th0_A226 SMT3-, sentrin-specific protease 2; SUMO, AXAM, SE 100.0
2xph_A238 Sentrin-specific protease 1; hydrolase, cysteine p 100.0
1euv_A221 ULP1 protease; SUMO hydrolase, ubiquitin-like prot 100.0
2bkr_A212 Sentrin-specific protease 8; protein-binding-hydro 100.0
2oix_A186 Xanthomonas outer protein D; CLAN CE family 48 cys 99.98
4ekf_A204 Adenain; alpha and beta protein (A+B), hydrolase; 94.9
>3eay_A Sentrin-specific protease 7; ULP, SENP, SUMO, ubiquitin, crystal, alternative splicing, hydrolase, phosphoprotein, polymorphism, thiol protease; 2.40A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=9.7e-45  Score=372.87  Aligned_cols=223  Identities=26%  Similarity=0.529  Sum_probs=179.9

Q ss_pred             CCeeecCCCCCCCceEEecccccccCCCCccCHHHHHHHHHHHHHhcCCCCcCCCceEEEchhhHHHHHHhhhc--CCCC
Q 009157          302 DAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH--KGGD  379 (542)
Q Consensus       302 ~~~i~yP~~~~~~~i~Lt~~DL~~L~~~~WLND~IInfyl~~L~~~~~~~~~~~~~v~~fnTfFy~kL~~~~~~--kg~d  379 (542)
                      ...|+||+++++++++|+.+||.||.+++||||+|||||++||..+... .....++|+||||||++|......  .+..
T Consensus        19 ~~~~~yP~~~~k~~i~it~~Dl~~L~~~~wLND~IInFyl~~L~~e~~~-~~~~~r~h~FnSFFy~kL~~~~~~~~~~~~   97 (323)
T 3eay_A           19 QKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKAS-DELVERSHIFSSFFYKCLTRKENNLTEDNP   97 (323)
T ss_dssp             CEEEEESCTTSSSCEEEEHHHHHTTSTTCCCCHHHHHHHHHHHHHHTSC-HHHHHTEEECCTHHHHHHSCC--------C
T ss_pred             ceeEEeCCCCCCCceEEEHHHHHhhCCCCCcCHHHHHHHHHHHHhhhcc-ccccCcEEEEchHHHHHHHhcccccccccc
Confidence            3679999999999999999999999999999999999999999754332 123468999999999999863210  0000


Q ss_pred             ----chhhhHHHHhhhccccCCCCCEEEEEeecCCceEEEEEEcCCCCC-------------------------------
Q 009157          380 ----KDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKED-------------------------------  424 (542)
Q Consensus       380 ----~~~~f~~vkrWtk~vdIf~kd~IfIPIn~~~HWsLvVId~~~k~~-------------------------------  424 (542)
                          ....|.+|+||++++|||++|+||||||.+.||+|+|||+|..+.                               
T Consensus        98 ~~s~~~~~y~~VrrWtrkvdlf~kD~I~IPIn~~~HW~LaVI~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  177 (323)
T 3eay_A           98 NLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLR  177 (323)
T ss_dssp             CSCHHHHHHTTSGGGGTTCCGGGCSEEEEEEEETTEEEEEEEECTTCSSCBCC---------------------------
T ss_pred             cchhHHHHHHHHHHHHhhcccccCCEEEEecCCCCceEEEEEecCCcccccccccccccccccccccccccccccccccc
Confidence                124689999999999999999999999999999999999997420                               


Q ss_pred             -------------------------CCCCeEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhccCCCCCCcccccccccCC
Q 009157          425 -------------------------ESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLP  479 (542)
Q Consensus       425 -------------------------~~~~~I~~yDSL~~~~~k~v~~~L~~~L~~e~~~~~~~~~~~Dl~~~~~~Wk~lp  479 (542)
                                               .++|+|+|||||++++...++..|+.||..||+.+.+..    ..++...|..  
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~pcIl~lDSL~~~~~~~~~~~Lr~YL~~E~~~k~~~~----~~f~~~~~~~--  251 (323)
T 3eay_A          178 TTSTLSLSAEDSQSTESNMSVPKKMCKRPCILILDSLKAASVQNTVQNLREYLEVEWEVKLKTH----RQFSKTNMVD--  251 (323)
T ss_dssp             ----------------------CCCCBCSEEEEECSSCCSSHHHHHHHHHHHHHHHHHHHHSSC----CCCCTTTSCE--
T ss_pred             cccccccccccccccccccccccccCCCCeEEEEECCCCCCcchHHHHHHHHHHHHHHhhcCCC----cCCCHhHcee--
Confidence                                     135799999999998778899999999999998865432    1233334432  


Q ss_pred             ccccccCCCcCCCCCCCChHHHHHHHHHHHhhhCCCC----------CCHHhHHHHHHHHHHHHHhc
Q 009157          480 RRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPER----------LKKKDLAMVLPAITNRTCYV  536 (542)
Q Consensus       480 ~~i~~~~~~vPqQ~Ng~DCGVFVL~yae~~~~~~p~~----------ftq~dm~~fR~~i~~~ll~~  536 (542)
                           ....+|||.|++|||||||+||++|+.+.+..          |+..+|...|..|..-|+..
T Consensus       252 -----~~~~~P~Q~N~~DCGvfvl~~~e~~~~~~~~~f~~~~~~~~wf~~~~i~~kR~ei~~LI~~L  313 (323)
T 3eay_A          252 -----LCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEKWFPRHVIKTKREDIRELILKL  313 (323)
T ss_dssp             -----ECCBCCCCCSTTCHHHHHHHHHHHHHHSCCCCCCSSCBCTTSSCHHHHHTHHHHHHHHHHHH
T ss_pred             -----ccCCCCCcCCCCcHHHHHHHHHHHHHhCCccccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence                 34579999999999999999999999987543          56789999999999877654
>1th0_A SMT3-, sentrin-specific protease 2; SUMO, AXAM, SENP, ULP, cell cycle, hydrolase; 2.20A {Homo sapiens} SCOP: d.3.1.7 PDB: 1tgz_A 2io0_A 2io1_A 2io2_A 2io3_A Back     alignment and structure
>2xph_A Sentrin-specific protease 1; hydrolase, cysteine protease, thiol protease; 2.40A {Homo sapiens} PDB: 2xre_A 2iyc_A 2iyd_A 2iy1_A 2iy0_A 2ckg_A 2ckh_A 2g4d_A Back     alignment and structure
>1euv_A ULP1 protease; SUMO hydrolase, ubiquitin-like protease 1, SMT3 hydrolase desumoylating enzyme, cysteine protease; 1.60A {Saccharomyces cerevisiae} SCOP: d.3.1.7 PDB: 2hkp_A 2hl8_A 2hl9_A Back     alignment and structure
>2bkr_A Sentrin-specific protease 8; protein-binding-hydrolase complex, ubiquitin, hydrolase, Pro thiol protease, UBL conjugation pathway, ubiquitin/hydrolas complex; 1.90A {Homo sapiens} SCOP: d.3.1.7 PDB: 2bkq_A 1xt9_A Back     alignment and structure
>2oix_A Xanthomonas outer protein D; CLAN CE family 48 cysteine protease, type III secreted effec desumoylating enzyme; 1.80A {Xanthomonas euvesicatoria} PDB: 2oiv_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 542
d2iy1a1225 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {H 1e-29
d1th0a_226 d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {H 4e-29
d1euva_221 d.3.1.7 (A:) Ulp1 protease C-terminal domain {Bake 7e-25
d2bkra1212 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SEN 7e-20
>d2iy1a1 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 225 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Adenain-like
domain: Sentrin-specific protease 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (285), Expect = 1e-29
 Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 29/214 (13%)

Query: 311 VDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLK 370
            +   + I   DI  L    +L   I+NFY+  L  ++    + +   H FNT+F++K  
Sbjct: 27  SEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKE--KGLPSVHAFNTFFFTK-- 82

Query: 371 EAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPII 430
                    K + +   +RW K V++F    +L+PIH  VHW L ++            I
Sbjct: 83  --------LKTAGYQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRK------KNI 128

Query: 431 LHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVP 490
            + DS+    +      +  +LK+E    K++            WQ   ++  +     P
Sbjct: 129 TYYDSMG-GINNEACRILLQYLKQESIDKKRK------EFDTNGWQLFSKKSQEI----P 177

Query: 491 QQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAM 524
           QQ N  D G+F   + +   ++ P    ++ +  
Sbjct: 178 QQMNGSDAGMFACKYADCITKDRPINFTQQHMPY 211
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 226 Back     information, alignment and structure
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221 Back     information, alignment and structure
>d2bkra1 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SENP8 {Human (Homo sapiens) [TaxId: 9606]} Length = 212 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query542
d1euva_221 Ulp1 protease C-terminal domain {Baker's yeast (Sa 100.0
d2iy1a1225 Sentrin-specific protease 1 {Human (Homo sapiens) 100.0
d1th0a_226 Sentrin-specific protease 2, SENP2 {Human (Homo sa 100.0
d2bkra1212 Sentrin-specific protease 8, SENP8 {Human (Homo sa 100.0
d1nlna_203 Human adenovirus 2 proteinase, adenain {Mastadenov 93.17
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Adenain-like
domain: Ulp1 protease C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-39  Score=316.56  Aligned_cols=208  Identities=25%  Similarity=0.416  Sum_probs=168.4

Q ss_pred             CccchHHHHHHHHhhcC---CeeecCCCCCCCceEEecccccccCCCCccCHHHHHHHHHHHHHhcCCCCcCCCceEEEc
Q 009157          286 HIETTEQADEFAECMID---AKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFN  362 (542)
Q Consensus       286 ~~~~~e~~~e~~~~~~~---~~i~yP~~~~~~~i~Lt~~DL~~L~~~~WLND~IInfyl~~L~~~~~~~~~~~~~v~~fn  362 (542)
                      |+.+.+...++.+.+..   ..+.     ...+++||.+|+.+|.+++||||+|||||++||.+..       +++++||
T Consensus         5 ~~lt~~~~~~~~~~l~~~~~~~~~-----~~~~~~it~~Dl~~L~~~~WLnD~iIn~y~~~l~~~~-------~~~~~~~   72 (221)
T d1euva_           5 PELNEKDDDQVQKALASRENTQLM-----NRDNIEITVRDFKTLAPRRWLNDTIIEFFMKYIEKST-------PNTVAFN   72 (221)
T ss_dssp             CCCCHHHHHHHHHHHTCSSCCEEE-----EETTEEEEHHHHGGGSTTCCCBHHHHHHHHHHHHHHS-------TTEEECC
T ss_pred             CCCCHHHHHHHHHHHcCCCCceee-----ecCCcEEeHHHHhhcCCCcccCcHHHHHHHHHHHhcC-------CCeEEec
Confidence            34556667777766642   2222     2468999999999999999999999999999998763       4689999


Q ss_pred             hhhHHHHHHhhhcCCCCchhhhHHHHhhh--ccccCCCCCEEEEEeec-CCceEEEEEEcCCCCCCCCCeEEEEcCCCCC
Q 009157          363 TYFYSKLKEAVSHKGGDKDSFFIKFRRWW--KGVNIFQKSYVLIPIHE-DVHWSLVIICIPDKEDESGPIILHLDSLKLH  439 (542)
Q Consensus       363 TfFy~kL~~~~~~kg~d~~~~f~~vkrWt--k~vdIf~kd~IfIPIn~-~~HWsLvVId~~~k~~~~~~~I~~yDSL~~~  439 (542)
                      ||||..|...          .|..+++|+  ++.+++++++||||||. +.||+|+||+++.+      +|+|||||++.
T Consensus        73 s~f~~~l~~~----------~~~~~~~w~~~~~~~~~~~~~i~iPin~~~~HW~l~vi~~~~~------~i~~~DSl~~~  136 (221)
T d1euva_          73 SFFYTNLSER----------GYQGVRRWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKK------TIGYVDSLSNG  136 (221)
T ss_dssp             THHHHHHHHH----------TGGGTTTTTGGGTSCGGGCSEEEEEEEETTTEEEEEEEETTTT------EEEEECSSCCS
T ss_pred             cHHHHhHhhh----------chHHHHHHHHhcccchhhcceeEeeEecccceEEEEEeecccc------ceeeeccccCC
Confidence            9999999773          366789998  56799999999999996 68999999999987      99999999887


Q ss_pred             CcH---HHHHHHHHHHHHHHHHhhccCCCCCCcccccccccCCccccccCCCcCCCCCCCChHHHHHHHHHHHhhhCCCC
Q 009157          440 CSL---SIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPER  516 (542)
Q Consensus       440 ~~k---~v~~~L~~~L~~e~~~~~~~~~~~Dl~~~~~~Wk~lp~~i~~~~~~vPqQ~Ng~DCGVFVL~yae~~~~~~p~~  516 (542)
                      +..   .++..|+.|+..+++...           ...|.       ....++|||.||+|||||||+||++++.+.|..
T Consensus       137 ~~~~~~~i~~~l~~~l~~~~~~~~-----------~~~~~-------~~~~~~PqQ~N~~DCGvfvl~~~~~~~~~~~~~  198 (221)
T d1euva_         137 PNAMSFAILTDLQKYVMEESKHTI-----------GEDFD-------LIHLDCPQQPNGYDCGIYVCMNTLYGSADAPLD  198 (221)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTSSS-----------CTTCE-------EEEECCCCCSSSSTHHHHHHHHHHHHHTTCCCC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhhc-----------CCCCe-------eeeccCCCCCCCCChHHHHHHHHHHHhCCCCCc
Confidence            643   356666777766543211           12233       234589999999999999999999999999999


Q ss_pred             CCHHhHHHHHHHHHHHHHhcCcc
Q 009157          517 LKKKDLAMVLPAITNRTCYVSYV  539 (542)
Q Consensus       517 ftq~dm~~fR~~i~~~ll~~~~~  539 (542)
                      |+++||+.||+.|+++|+...++
T Consensus       199 ~~q~d~~~~R~~i~~~il~~~l~  221 (221)
T d1euva_         199 FDYKDAIRMRRFIAHLILTDALK  221 (221)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTTC
T ss_pred             cCHHHHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999987653
>d2iy1a1 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bkra1 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SENP8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nlna_ d.3.1.7 (A:) Human adenovirus 2 proteinase, adenain {Mastadenovirus H2 [TaxId: 10515]} Back     information, alignment and structure