Citrus Sinensis ID: 009158

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540--
Protein Sequence
MLFCTISGEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMDKMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVEEVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALVSDLPKKFPLETTGERVVRVPTRKVSPRRGSRRSASRRHRKTISSDRDTDSS
Secondary Structure (PSIPRED)
ccEEEEEccccccccccccEEEccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHcccccccccEEEEccEEcccccccccccccHHHHHHHHHcccEEEEEEEEcccccccccccccccccccccEEEEEcHHHHHHHHHccccccccccccEEEEEccccccccHHHcccccccccccccccccEEEEEEcEEEEEccHHHHHHHHHHcccccEEEccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHccccccccHHHHHHHHHccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEccccccccccccEEEccccEEEccccccHHHHHcccccccccccccEEccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccHHHHHHHccccccccHHHHEEEEEEccccccccccccccccccccHHHHHHHcccccccEEEccEEcccccccccccccHHHHHHHHHcccEEEEEEEEcccccccccccccHHHccccEEEEEEccccHHHHHHcccccccccEEEEEEEEEcccccccHHHccccccccHHHHccccEEEEEEEccEEEEccHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHccccccccccHHHHHHHHHHHcccHHcccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccEEEccccccccc
Coil and Loop (DISEMBL)
mlfctisgedaqegdqvpnlrlndslsinysesspiyREQTKKMYNETSFNNIESQNSIANSVEAMDKMVsvrpiestvfpppppsyflgytlppghpcnsftlppppadkkrtgprpcpvcylpVEEVIAlmpkvpsfspvlknltyitepvlnreaefggsdfggypplaqrnnsydiresmsvhcgfvkgkpgrgtgydldeedildmeqcHGIVVVSAIFgafddinqpsniseysrkTVCFVMFVDEETEAYLKAnsgldrtkkigIWRIVVihnppysdarrtgkipkllahrlfpnarfslwidgklelvvdpYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFyknegltpyseaklpitsdvpegcviirehvpisnlFVCLWFnevdrftsrdqisfSTVRDKLWAKTNWTVNMFLDCERRNFVVQkyhrdhilpnpppvpvdleppplslaveappppalvsdlpkkfplettgervvrvptrkvsprrgsrrsasrrhrktissdrdtdss
Flexible Loop (DISEMBL)
MLFctisgedaqegdqvpnlrlndslsinysesspiYREQTKKMYNETSFNNIESQNSIANSVEAMDKMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVEEVIALMPKVPSFSPVLKNLTYITEPVLNREAEfggsdfggypPLAQRNNSYDIRESMSVhcgfvkgkpgrgTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINqpsniseysrKTVCFVMFVDEETEAYLkansgldrtkkigiWRIVVihnppysdarrtGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANkaakkydnasIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFtsrdqisfstvrdklwaktNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALVSDLPkkfplettgervvrvptrkvsprrgsrrsasrrhrktissdrdtdss
Low Complexity Region (SEG)
MLFCTISGEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMDKMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVEEVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHIlpnpppvpvdleppplslaveappppalvsDLPKKFPLETTGERVVRVPTRKVsprrgsrrsasrrhrKTISSDRDTDSS
Disordered region (IsUnstruct)
***************************************************************************************FLGYT**************************CPVCYLPVEEVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHIL*******************************************************************************
Disordered Region (DISOPRED)
MLFCT*****************NDSLSINYSESSPIYREQTK*********************************************FLGYT***************************PVCYLPVEEVIALMPKVPS**PVLKNLTY********************PPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQK**************************************************************************************
Disordered Region (DISEMBL)
MLFCTISGEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMDKMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPP********RPCPVCYLPVEEVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALVSDLPKKFPLETTGERVVRV********************************
Disordered Region (DISPRO)
MLFCTISGEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANS******MVSV*PI*STVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVEEVIALMPKVPSFSPVLKNLTYITEPVLNR***FGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHI*PNPPPVPV***********************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLFCTISGEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMDKMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVEEVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALVSDLPKKFPLETTGERVVRVPTRKVSPRRGSRRSASRRHRKTISSDRDTDSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	542
224077102	591	predicted protein [Populus trichocarpa]	0.922	0.846	0.697	0.0
255536807	587	conserved hypothetical protein [Ricinus	0.916	0.846	0.673	0.0
224125520	591	predicted protein [Populus trichocarpa]	0.773	0.708	0.729	0.0
15217874	581	uncharacterized protein [Arabidopsis tha	0.789	0.736	0.732	0.0
297851266	578	hypothetical protein ARALYDRAFT_473032 [	0.791	0.742	0.715	0.0
17064856	581	Unknown protein [Arabidopsis thaliana] g	0.789	0.736	0.730	0.0
356555317	570	PREDICTED: uncharacterized protein LOC10	0.881	0.838	0.647	0.0
356521368	553	PREDICTED: uncharacterized protein LOC10	0.898	0.880	0.629	0.0
356549327	570	PREDICTED: uncharacterized protein LOC10	0.800	0.761	0.688	0.0
356548717	535	PREDICTED: uncharacterized protein LOC10	0.784	0.794	0.693	0.0

>gi|224077102|ref|XP_002305132.1| predicted protein [Populus trichocarpa] gi|222848096|gb|EEE85643.1| predicted protein [Populus trichocarpa]

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/536 (69%), Positives = 425/536 (79%), Gaps = 36/536 (6%)

Query: 8   GEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMD 67
           GEDAQEGD+ PN+ +N S+S++             ++ N+TSF            ++ + 
Sbjct: 91  GEDAQEGDRPPNISVNASVSLS-------------RIENKTSF------------LQGI- 124

Query: 68  KMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 127
                  I     PPPPP+YFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE
Sbjct: 125 -------ISDISLPPPPPAYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 177

Query: 128 EVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVH 187
           E IALMPKVPSFSPV+KNLTYI E  L+ E +FGGSDFGGYP L  R++SYDIRESMSVH
Sbjct: 178 EAIALMPKVPSFSPVIKNLTYIHEDPLSGERDFGGSDFGGYPTLKHRSDSYDIRESMSVH 237

Query: 188 CGFVKGK-PGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCF 246
           CGFV+GK PG+ TG+D+DE D+  MEQCHG+VV SAIFGAFDDI QP NISEYS+ TVCF
Sbjct: 238 CGFVQGKRPGQNTGFDMDEIDLEAMEQCHGVVVASAIFGAFDDIQQPHNISEYSKNTVCF 297

Query: 247 VMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARF 306
            MFVDEETEAYLK NSGLD ++KIG+WRIVV HN PY+D RR GK+PKLL+HR+FPNARF
Sbjct: 298 FMFVDEETEAYLKNNSGLDDSRKIGLWRIVVAHNLPYTDGRRNGKVPKLLSHRMFPNARF 357

Query: 307 SLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDF 366
           SLWIDGKLEL+VDPYQILERHLWRKNATFAISRHY+RFDV +EAEANKAA KY+NASIDF
Sbjct: 358 SLWIDGKLELLVDPYQILERHLWRKNATFAISRHYRRFDVFMEAEANKAAGKYENASIDF 417

Query: 367 QIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISF 426
           Q+EFYK EGL PYSEAKLPITSDVPEGCV+IREHVPISNLF CLWFNEVDRFTSRDQISF
Sbjct: 418 QVEFYKKEGLIPYSEAKLPITSDVPEGCVVIREHVPISNLFTCLWFNEVDRFTSRDQISF 477

Query: 427 STVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPP 486
           STVRDK+  KTNWTVNMFLDCERRNFVVQKYHRD +L      P    PPP SL    P 
Sbjct: 478 STVRDKIHEKTNWTVNMFLDCERRNFVVQKYHRD-VLEQMAHPPPVYPPPPPSLLQLPPS 536

Query: 487 PPALVSDLPKKFPLETTGERVVRVPTRKVSPRRGSRRSASRRHRKTISSDRDTDSS 542
           PP LV++ P +   ET+  +V+  P RK +P R  RRS SRRHRK ++  +DTD+S
Sbjct: 537 PPVLVNEPPIQTTPETSTVKVIGAPVRK-APARRGRRSGSRRHRKVVAGAKDTDAS 591

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255536807|ref|XP_002509470.1| conserved hypothetical protein [Ricinus communis] gi|223549369|gb|EEF50857.1| conserved hypothetical protein [Ricinus communis]

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/536 (67%), Positives = 408/536 (76%), Gaps = 39/536 (7%)

Query: 8   GEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMD 67
           GED+QEGD V N+  N S                        F+N E++ SI+ +   + 
Sbjct: 90  GEDSQEGDHVSNITFNSSYP----------------------FSNTENRTSISKNFNLLP 127

Query: 68  KMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 127
                 P            YFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE
Sbjct: 128 PQPQPPPPPPPT------PYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 181

Query: 128 EVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVH 187
           E IALMPK PS+SPV+KNLTYI E  L+R+ EFGGSDFGGYP L QR+ SYDIR+SM+VH
Sbjct: 182 EAIALMPKFPSYSPVVKNLTYIYEDPLSRDGEFGGSDFGGYPTLKQRSESYDIRDSMNVH 241

Query: 188 CGFVKG-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCF 246
           CGFV+G +PGR TG+D+DE D+  MEQCHG+VV SAIFGAFDDI QPSNIS YS++TVCF
Sbjct: 242 CGFVRGQRPGRSTGFDMDETDLAAMEQCHGVVVASAIFGAFDDIQQPSNISMYSKQTVCF 301

Query: 247 VMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARF 306
            MFVDEETEAYLK N GLD ++ +G+WRIV++ N PY+D RR GK+PKLL+HRLFPN R+
Sbjct: 302 FMFVDEETEAYLKKNGGLDSSRMVGVWRIVLVRNLPYADGRRNGKVPKLLSHRLFPNTRY 361

Query: 307 SLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDF 366
           SLWIDGKLELVVDP+QILERHLWRKNA+FAISRHYKRFDV VEAEANKAA KYDNASIDF
Sbjct: 362 SLWIDGKLELVVDPHQILERHLWRKNASFAISRHYKRFDVFVEAEANKAAGKYDNASIDF 421

Query: 367 QIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISF 426
           QI+FYK EGLTPYSEAKLPITSDVPEGCVIIREHVPISNLF CLWFNEVDRFTSRDQISF
Sbjct: 422 QIDFYKKEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFTCLWFNEVDRFTSRDQISF 481

Query: 427 STVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPP 486
           STVRDK+ AKTNWTVNMFLDCERRNFVVQKYHRD +L +  P P       +       P
Sbjct: 482 STVRDKVQAKTNWTVNMFLDCERRNFVVQKYHRD-VLEHMAPPPP------VYPPPPPTP 534

Query: 487 PPALVSDLPKKFPLETTGERVVRVPTRKVSPRRGSRRSASRRHRKTISSDRDTDSS 542
           P ALV + P K  LE + E+VV  P R+       R+S SRRHRK ++  RD DSS
Sbjct: 535 PSALVHEAPFKTALENSDEKVVNGPVRRARR---GRKSGSRRHRKVVAGGRDIDSS 587

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125520|ref|XP_002329825.1| predicted protein [Populus trichocarpa] gi|222870887|gb|EEF08018.1| predicted protein [Populus trichocarpa]

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/454 (72%), Positives = 373/454 (82%), Gaps = 35/454 (7%)

Query: 8   GEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMD 67
           GEDAQEG + P + L+D+ S++             ++ N+TSF                 
Sbjct: 91  GEDAQEGGRPPTISLSDTSSLS-------------RIENKTSF----------------- 120

Query: 68  KMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 127
                + I S +    PP+YFLGYTLPPGHPCN FTLPPPPADKKRTGPRPCPVCYLPVE
Sbjct: 121 ----FQGIFSNISLLHPPAYFLGYTLPPGHPCNRFTLPPPPADKKRTGPRPCPVCYLPVE 176

Query: 128 EVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVH 187
           E IALMPKVPSFSPV+KNLTYI E  L+RE EFGGSDFGGYP L QR++SYDIRESM VH
Sbjct: 177 EAIALMPKVPSFSPVIKNLTYIQEDPLSREGEFGGSDFGGYPTLKQRSDSYDIRESMRVH 236

Query: 188 CGFVKGK-PGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCF 246
           CGFV+GK PG+ TG+D+D+ D+  MEQCHG+VV SAIFGAFDDI QP NISEYS+ T+CF
Sbjct: 237 CGFVQGKRPGQNTGFDMDKIDLDAMEQCHGVVVASAIFGAFDDIQQPRNISEYSKNTICF 296

Query: 247 VMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARF 306
            MFVDEETEAYLK NSGL+ ++K+GIWRIVV+HN PY+D RR GK+PKLL+HR+FPNARF
Sbjct: 297 FMFVDEETEAYLKNNSGLNDSRKVGIWRIVVVHNLPYTDGRRNGKVPKLLSHRMFPNARF 356

Query: 307 SLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDF 366
           SLWIDGKLELVVDPYQILER LWR+NATFAISRHY+RFDV +EAEANKAA KY+NASIDF
Sbjct: 357 SLWIDGKLELVVDPYQILERFLWRENATFAISRHYRRFDVFIEAEANKAAGKYENASIDF 416

Query: 367 QIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISF 426
           Q+EFYK EGLTPYSEAK PI SDVPEGCV+IREHVPISNLF CLWFNEVDRFTSRDQISF
Sbjct: 417 QVEFYKKEGLTPYSEAKFPIISDVPEGCVVIREHVPISNLFTCLWFNEVDRFTSRDQISF 476

Query: 427 STVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRD 460
           STVRDK+  KTNWTVNMFLDC+RRNFVVQKYHRD
Sbjct: 477 STVRDKIHEKTNWTVNMFLDCQRRNFVVQKYHRD 510

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217874|ref|NP_174145.1| uncharacterized protein [Arabidopsis thaliana] gi|9795613|gb|AAF98431.1|AC021044_10 Unknown protein [Arabidopsis thaliana] gi|332192814|gb|AEE30935.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  688 bits (1776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/453 (73%), Positives = 370/453 (81%), Gaps = 25/453 (5%)

Query: 8   GEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMD 67
           GED+QEG   P+L  N S  +NYS        QT          N E   +I N      
Sbjct: 81  GEDSQEGQGPPSLHFNGSSGVNYSNML-----QT----------NEELNMNIGN------ 119

Query: 68  KMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 127
             +S +  E  VFPPPP  +FLGY+LP GHPCNSFTLPPPPAD+KRTGPRPCPVCYLPVE
Sbjct: 120 --ISFKAKEVIVFPPPP-IHFLGYSLPQGHPCNSFTLPPPPADRKRTGPRPCPVCYLPVE 176

Query: 128 EVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVH 187
           E +ALMP  PSFSPVLKNLTYI E  LNRE EFGGSDFGGYP L  RN+S+DI+E+MSVH
Sbjct: 177 EAVALMPNAPSFSPVLKNLTYIYEEPLNRETEFGGSDFGGYPTLKHRNDSFDIKETMSVH 236

Query: 188 CGFVKG-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCF 246
           CGFVKG +PGR TG+D+DE D+L+M+QC GIVV SA+F AFDD+  P NIS+Y+ +TVCF
Sbjct: 237 CGFVKGPQPGRNTGFDIDEADLLEMKQCRGIVVASAVFDAFDDVKAPQNISKYAEETVCF 296

Query: 247 VMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARF 306
            MFVDEETE+ LK   GLD  KK+GIWR+VV+HN PYSD RR GK+PKLL HR+FPNAR+
Sbjct: 297 YMFVDEETESILKRERGLDGNKKVGIWRVVVVHNLPYSDGRRNGKVPKLLVHRMFPNARY 356

Query: 307 SLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDF 366
           SLWIDGKLELVVDPYQILER LWRKNATFAISRHYKRFDVLVEAEANKAA KYDNASIDF
Sbjct: 357 SLWIDGKLELVVDPYQILERFLWRKNATFAISRHYKRFDVLVEAEANKAAGKYDNASIDF 416

Query: 367 QIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISF 426
           Q++FYKNEGLTPYS AKLPITSDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISF
Sbjct: 417 QVDFYKNEGLTPYSVAKLPITSDVPEGCVILREHVPISNLFTCLWFNEVDRFTSRDQISF 476

Query: 427 STVRDKLWAKTNWTVNMFLDCERRNFVVQKYHR 459
           STVRDK+ AKTNWTV+MFLDCERRNFVVQ+YHR
Sbjct: 477 STVRDKIAAKTNWTVSMFLDCERRNFVVQRYHR 509

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851266|ref|XP_002893514.1| hypothetical protein ARALYDRAFT_473032 [Arabidopsis lyrata subsp. lyrata] gi|297339356|gb|EFH69773.1| hypothetical protein ARALYDRAFT_473032 [Arabidopsis lyrata subsp. lyrata]

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/453 (71%), Positives = 365/453 (80%), Gaps = 24/453 (5%)

Query: 8   GEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMD 67
           G   ++G   P+L  N +  +NYS       EQ   + N                     
Sbjct: 81  GNQCEDGQGPPSLHFNGTSGVNYSNMLQTNEEQNMNIGN--------------------- 119

Query: 68  KMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 127
             +S +  E  VFPPPPP +FLGY+LP GHPCNSFTLPPPPAD+KRTGPRPCPVCYLPVE
Sbjct: 120 --ISFKAKEVIVFPPPPPMHFLGYSLPQGHPCNSFTLPPPPADRKRTGPRPCPVCYLPVE 177

Query: 128 EVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVH 187
           E +ALMP  PSFSPVLKNLTYI E  LNRE EFGGSDFGGYP L  RN+S+DI+E+MSVH
Sbjct: 178 EAVALMPNAPSFSPVLKNLTYICEEPLNRETEFGGSDFGGYPTLKDRNDSFDIKETMSVH 237

Query: 188 CGFVKG-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCF 246
           CGFVKG +PGR TG+D+DE D+L+M+QC GIVV SA+F AFDD+  P NIS+Y+ +TVCF
Sbjct: 238 CGFVKGPQPGRNTGFDIDEADLLEMKQCRGIVVASAVFDAFDDVKAPQNISKYAEETVCF 297

Query: 247 VMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARF 306
            +FVDEETE+ LK   GLD  KK+GIWR+VV+HN PYSD RR GK+PKLL HR+FPNAR+
Sbjct: 298 YIFVDEETESILKRERGLDGNKKVGIWRVVVVHNLPYSDGRRNGKVPKLLVHRMFPNARY 357

Query: 307 SLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDF 366
           SLWIDGKLELVVDPYQILER LWRKNATFAISRHYKRFDVLVEAEANKAA KYDNASIDF
Sbjct: 358 SLWIDGKLELVVDPYQILERFLWRKNATFAISRHYKRFDVLVEAEANKAAGKYDNASIDF 417

Query: 367 QIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISF 426
           Q++FYKNEGLTPYS AKLPITSDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISF
Sbjct: 418 QVDFYKNEGLTPYSVAKLPITSDVPEGCVILREHVPISNLFTCLWFNEVDRFTSRDQISF 477

Query: 427 STVRDKLWAKTNWTVNMFLDCERRNFVVQKYHR 459
           STVRDK+ AKTNWTV+MFLDCERRNFVVQ+YHR
Sbjct: 478 STVRDKIAAKTNWTVSMFLDCERRNFVVQRYHR 510

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17064856|gb|AAL32582.1| Unknown protein [Arabidopsis thaliana] gi|25083658|gb|AAN72102.1| Unknown protein [Arabidopsis thaliana]

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/453 (73%), Positives = 369/453 (81%), Gaps = 25/453 (5%)

Query: 8   GEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMD 67
           GED+QEG   P+L  N S  +NYS        QT          N E   +I N      
Sbjct: 81  GEDSQEGQGPPSLHFNGSSGVNYSNML-----QT----------NEELNMNIGN------ 119

Query: 68  KMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 127
             +S +  E  VFPPPP  +FLGY+LP GHPCNSFTLPPPPAD+KRTGPRPCPVCYLPVE
Sbjct: 120 --ISFKAKEVIVFPPPP-IHFLGYSLPQGHPCNSFTLPPPPADRKRTGPRPCPVCYLPVE 176

Query: 128 EVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVH 187
             +ALMP  PSFSPVLKNLTYI E  LNRE EFGGSDFGGYP L  RN+S+DI+E+MSVH
Sbjct: 177 GAVALMPNAPSFSPVLKNLTYIYEEPLNRETEFGGSDFGGYPTLKHRNDSFDIKETMSVH 236

Query: 188 CGFVKG-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCF 246
           CGFVKG +PGR TG+D+DE D+L+M+QC GIVV SA+F AFDD+  P NIS+Y+ +TVCF
Sbjct: 237 CGFVKGPQPGRNTGFDIDEADLLEMKQCRGIVVASAVFDAFDDVKAPQNISKYAEETVCF 296

Query: 247 VMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARF 306
            MFVDEETE+ LK   GLD  KK+GIWR+VV+HN PYSD RR GK+PKLL HR+FPNAR+
Sbjct: 297 YMFVDEETESILKRERGLDGNKKVGIWRVVVVHNLPYSDGRRNGKVPKLLVHRMFPNARY 356

Query: 307 SLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDF 366
           SLWIDGKLELVVDPYQILER LWRKNATFAISRHYKRFDVLVEAEANKAA KYDNASIDF
Sbjct: 357 SLWIDGKLELVVDPYQILERFLWRKNATFAISRHYKRFDVLVEAEANKAAGKYDNASIDF 416

Query: 367 QIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISF 426
           Q++FYKNEGLTPYS AKLPITSDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISF
Sbjct: 417 QVDFYKNEGLTPYSVAKLPITSDVPEGCVILREHVPISNLFTCLWFNEVDRFTSRDQISF 476

Query: 427 STVRDKLWAKTNWTVNMFLDCERRNFVVQKYHR 459
           STVRDK+ AKTNWTV+MFLDCERRNFVVQ+YHR
Sbjct: 477 STVRDKIAAKTNWTVSMFLDCERRNFVVQRYHR 509

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555317|ref|XP_003545980.1| PREDICTED: uncharacterized protein LOC100792761 [Glycine max]

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/534 (64%), Positives = 401/534 (75%), Gaps = 56/534 (10%)

Query: 8   GEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMD 67
           GED+QEG+ V N  +N ++SI  S S  I R       N   F  I              
Sbjct: 82  GEDSQEGNSVHNTSVNGNMSIGDSPSL-IARA------NIMGFTTI-------------- 120

Query: 68  KMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 127
                     +V PPPPPSYFLGYTLP GHPCNSFTLPPPPADKKRTGPRPCPVCYLP++
Sbjct: 121 ----------SVLPPPPPSYFLGYTLPSGHPCNSFTLPPPPADKKRTGPRPCPVCYLPMD 170

Query: 128 EVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVH 187
           E IAL+PK PS SPVLKNLT+I E  L R+ EFGGSDFGG+P L QRN S+DIRESMSVH
Sbjct: 171 EAIALVPKFPSPSPVLKNLTFIYEETLIRDGEFGGSDFGGFPTLRQRNESFDIRESMSVH 230

Query: 188 CGFVKG-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCF 246
           CGFV+G KPGR TG+D+DE+D+L+MEQCHG+VV SAIFG FD+IN+P+NIS+YS++TVCF
Sbjct: 231 CGFVRGTKPGRNTGFDMDEDDLLEMEQCHGVVVASAIFGNFDEINEPTNISDYSKETVCF 290

Query: 247 VMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARF 306
           +MFVDEETE YL+++  L  +KKIG+WRI+V HN PY+DARRTGKIPKLL HR+ PNAR+
Sbjct: 291 LMFVDEETEKYLRSSGRLGTSKKIGLWRIIVAHNLPYTDARRTGKIPKLLLHRMVPNARY 350

Query: 307 SLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDF 366
           S+W+DGKLELVVDPYQILER LWRKNATFAIS+HY+RFDV VEAEANKAA KY NASIDF
Sbjct: 351 SIWLDGKLELVVDPYQILERFLWRKNATFAISKHYRRFDVFVEAEANKAAGKYGNASIDF 410

Query: 367 QIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISF 426
           QI+FYKNEGLTPY+EAKLP+ SDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISF
Sbjct: 411 QIDFYKNEGLTPYTEAKLPLISDVPEGCVIVREHVPISNLFTCLWFNEVDRFTSRDQISF 470

Query: 427 STVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPP 486
           STVRDKL ++ ++   MFLDCERRNFVVQKYHRD +     PV V L PPP         
Sbjct: 471 STVRDKLLSRVDFHFLMFLDCERRNFVVQKYHRDILERLAAPVDVALSPPP--------- 521

Query: 487 PPALVSDLPKKFPLETTGERVVRVPTRKVSPRRGSRRSASRRHRKTISSDRDTD 540
                       P+ET  E+VVR    +       RR  SRRHRK ++  RD +
Sbjct: 522 ------------PVETLPEKVVRRGPGRRGR---DRRPGSRRHRKVVAGGRDIN 560

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521368|ref|XP_003529328.1| PREDICTED: uncharacterized protein LOC100783387 [Glycine max]

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/537 (62%), Positives = 402/537 (74%), Gaps = 50/537 (9%)

Query: 8   GEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMD 67
           GED+Q+G+ V N+ +N+S+S +                 +++F     +NS+ N++    
Sbjct: 65  GEDSQDGNTVTNINVNESVSTS-----------------DSTF-----ENSMTNAMGLTK 102

Query: 68  KMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 127
           ++V +         PPP  YFLGY LPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE
Sbjct: 103 RLVLL---------PPPTGYFLGYHLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 153

Query: 128 EVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVH 187
           E I LMP +PS SPVL NLTY+ E  L+R+ EFGGSDFGGYP L QRN+S+DIRESM+VH
Sbjct: 154 EAIGLMPALPSPSPVLGNLTYVYEENLSRDGEFGGSDFGGYPTLKQRNDSFDIRESMTVH 213

Query: 188 CGFVKG-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCF 246
           CGFV+G KPGR TG+D+D  D+ +MEQC G+VV SAIFG FD IN+P+NIS+YSRKTVCF
Sbjct: 214 CGFVRGIKPGRNTGFDIDGADLFEMEQCDGVVVASAIFGNFDVINEPNNISDYSRKTVCF 273

Query: 247 VMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARF 306
           +MFVDE+TE YL ++  L  +KKIG+WR +V  N PY DARRTGKIPKLL HRL PNAR+
Sbjct: 274 LMFVDEQTEKYLISSGKLGISKKIGLWRTIVARNLPYPDARRTGKIPKLLLHRLVPNARY 333

Query: 307 SLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDF 366
           S+W+DGKLELVVDPYQILER LWRKNATFAIS+HY+RFDV +EAEANKAA KYDNASIDF
Sbjct: 334 SIWLDGKLELVVDPYQILERFLWRKNATFAISKHYRRFDVFIEAEANKAAGKYDNASIDF 393

Query: 367 QIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISF 426
           QIEFYK EGLTPY+EAKLP+ SDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISF
Sbjct: 394 QIEFYKKEGLTPYTEAKLPLISDVPEGCVIVREHVPISNLFACLWFNEVDRFTSRDQISF 453

Query: 427 STVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPP 486
           STVRDK+ ++ ++  NMFLDCERRNFVVQKYHRD +L   PP       PP  L V    
Sbjct: 454 STVRDKILSRVDFHFNMFLDCERRNFVVQKYHRDLLLRLAPPASPPPPSPPPPLPV---- 509

Query: 487 PPALVSDLPKKFPLETTGERVVRVPTRKVSPRRGS-RRSASRRHRKTISSDRDTDSS 542
                        LET+ E+    P R+   RRG  RR+ SRRHRK ++  R+ + S
Sbjct: 510 -------------LETSPEKGANSPIRRGPGRRGKDRRAGSRRHRKVVAGGREMEPS 553

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549327|ref|XP_003543045.1| PREDICTED: uncharacterized protein LOC100804922 [Glycine max]

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/466 (68%), Positives = 373/466 (80%), Gaps = 32/466 (6%)

Query: 9   EDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMDK 68
           ED+QEG+ V N+ +N ++SI  S S               +  NI+   +I         
Sbjct: 83  EDSQEGNSVHNISVNGNMSIGVSPSL-------------IAGANIKGFTTI--------- 120

Query: 69  MVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVEE 128
                    +V PPPPPSYFLGYTLP GHPCN+FTLPPPPADKKRTGPRPCPVCYLPV+E
Sbjct: 121 ---------SVLPPPPPSYFLGYTLPSGHPCNTFTLPPPPADKKRTGPRPCPVCYLPVDE 171

Query: 129 VIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHC 188
            IALMPK PS SPVLKNL +I E  L+R+ EFGGSDFGGYP L QRN S+DIRESMSVHC
Sbjct: 172 AIALMPKFPSPSPVLKNLAFIYEETLSRDGEFGGSDFGGYPTLRQRNESFDIRESMSVHC 231

Query: 189 GFVKG-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFV 247
           GFV+G KPGR TG+D+DE+D+L+MEQCHG+VV SAIFG FD+IN+P+NIS+YS++TVCF+
Sbjct: 232 GFVRGTKPGRNTGFDMDEDDLLEMEQCHGVVVASAIFGNFDEINEPTNISDYSKETVCFL 291

Query: 248 MFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFS 307
           MFVDEETE YL+ +  L   KKIG+WRI+V HN PY+D RRTGKIPKLL HR+ PNA +S
Sbjct: 292 MFVDEETEKYLRISGRLGTRKKIGLWRIIVAHNLPYTDPRRTGKIPKLLLHRMVPNAHYS 351

Query: 308 LWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQ 367
           +W+DGKLELVVDPYQILER LWRKNATFAIS+HY+RFDV VEAEANKAA KY+NASIDFQ
Sbjct: 352 IWLDGKLELVVDPYQILERFLWRKNATFAISKHYRRFDVFVEAEANKAAGKYENASIDFQ 411

Query: 368 IEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFS 427
           IEFYKNEGLTPY+EAKLP+ SDVPEGCVI+REHVPIS+LF CLWFNEVDRFTSRDQISFS
Sbjct: 412 IEFYKNEGLTPYTEAKLPLISDVPEGCVIVREHVPISDLFTCLWFNEVDRFTSRDQISFS 471

Query: 428 TVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDL 473
           TVRDKL ++ ++   MFLDCERRNFVVQKYHRD +     PV + L
Sbjct: 472 TVRDKLLSRVDFHFLMFLDCERRNFVVQKYHRDILERLVAPVAIAL 517

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548717|ref|XP_003542746.1| PREDICTED: uncharacterized protein LOC100779951 [Glycine max]

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/457 (69%), Positives = 369/457 (80%), Gaps = 32/457 (7%)

Query: 8   GEDAQEGDQVPNLRLNDSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMD 67
            ED+Q+G+ V ++ +N+S+S + S S                      +NS  N++    
Sbjct: 45  AEDSQDGNTVSSINVNESVSASDSTS----------------------ENSTTNAMGLTK 82

Query: 68  KMVSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 127
           +         +V PPPP  YFLGY LPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE
Sbjct: 83  R---------SVLPPPPAGYFLGYRLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVE 133

Query: 128 EVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVH 187
           E I LMP +PS SPVL NLTY+ E  L+R+ EFGGSDFGGYP L QRN+S+DIRESMSVH
Sbjct: 134 EAIGLMPALPSPSPVLGNLTYVYEENLSRDGEFGGSDFGGYPTLKQRNDSFDIRESMSVH 193

Query: 188 CGFVKG-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCF 246
           CGFV+G KPGR TG+D+DE D  +MEQC+G+VV SAIFG FD+IN+P+NIS+YSRKTVCF
Sbjct: 194 CGFVRGIKPGRNTGFDIDEADHFEMEQCNGVVVASAIFGNFDEINEPNNISDYSRKTVCF 253

Query: 247 VMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARF 306
           +MFVDEETE YL ++  L  +KKIG+WRI+V  N PY DARRTGKIPKLL HRL PNAR+
Sbjct: 254 LMFVDEETEKYLISSGKLGISKKIGLWRIIVARNLPYPDARRTGKIPKLLLHRLVPNARY 313

Query: 307 SLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDF 366
           S+W+DGKLELVVDPYQILER LWRKNATFAIS+HY+RFDV +EAEANKAA KY+NASIDF
Sbjct: 314 SIWLDGKLELVVDPYQILERFLWRKNATFAISKHYRRFDVFIEAEANKAAGKYENASIDF 373

Query: 367 QIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISF 426
           QIEFYKNEGLTPY+EAKLP+ SDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISF
Sbjct: 374 QIEFYKNEGLTPYTEAKLPLISDVPEGCVIVREHVPISNLFTCLWFNEVDRFTSRDQISF 433

Query: 427 STVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHIL 463
           STVRDK+ ++ ++  NMFLDCERRNFVVQKYHRD +L
Sbjct: 434 STVRDKILSRVDFHFNMFLDCERRNFVVQKYHRDLLL 470

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	542
TAIR|locus:2032137	581	AT1G28240 [Arabidopsis thalian	0.717	0.669	0.800	1.1e-183
TAIR|locus:2037053	540	AT1G53040 [Arabidopsis thalian	0.785	0.788	0.603	2.8e-144
TAIR|locus:2056750	460	AT2G02910 [Arabidopsis thalian	0.636	0.75	0.423	5.3e-73
TAIR|locus:2136907	711	AT4G09630 [Arabidopsis thalian	0.538	0.410	0.478	4.7e-72
TAIR|locus:2009253	735	EMB2756 "EMBRYO DEFECTIVE 2756	0.573	0.423	0.466	2.4e-69
TAIR|locus:2121194	499	AT4G38500 [Arabidopsis thalian	0.607	0.659	0.429	1.7e-68
TAIR|locus:2165457	463	AT5G42660 [Arabidopsis thalian	0.618	0.723	0.378	1.3e-54
TAIR|locus:2162065	462	AT5G46220 [Arabidopsis thalian	0.594	0.696	0.347	1.7e-43

TAIR|locus:2032137 AT1G28240 [Arabidopsis thaliana (taxid:3702)]

 Score = 1727 (613.0 bits), Expect = 1.1e-183, Sum P(2) = 1.1e-183
 Identities = 313/391 (80%), Positives = 347/391 (88%)

Query:    70 VSVRPIESTVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVEEV 129
             +S +  E  VFPPPP  +FLGY+LP GHPCNSFTLPPPPAD+KRTGPRPCPVCYLPVEE 
Sbjct:   120 ISFKAKEVIVFPPPP-IHFLGYSLPQGHPCNSFTLPPPPADRKRTGPRPCPVCYLPVEEA 178

Query:   130 IALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCG 189
             +ALMP  PSFSPVLKNLTYI E  LNRE EFGGSDFGGYP L  RN+S+DI+E+MSVHCG
Sbjct:   179 VALMPNAPSFSPVLKNLTYIYEEPLNRETEFGGSDFGGYPTLKHRNDSFDIKETMSVHCG 238

Query:   190 FVKG-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVM 248
             FVKG +PGR TG+D+DE D+L+M+QC GIVV SA+F AFDD+  P NIS+Y+ +TVCF M
Sbjct:   239 FVKGPQPGRNTGFDIDEADLLEMKQCRGIVVASAVFDAFDDVKAPQNISKYAEETVCFYM 298

Query:   249 FVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSL 308
             FVDEETE+ LK   GLD  KK+GIWR+VV+HN PYSD RR GK+PKLL HR+FPNAR+SL
Sbjct:   299 FVDEETESILKRERGLDGNKKVGIWRVVVVHNLPYSDGRRNGKVPKLLVHRMFPNARYSL 358

Query:   309 WIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQI 368
             WIDGKLELVVDPYQILER LWRKNATFAISRHYKRFDVLVEAEANKAA KYDNASIDFQ+
Sbjct:   359 WIDGKLELVVDPYQILERFLWRKNATFAISRHYKRFDVLVEAEANKAAGKYDNASIDFQV 418

Query:   369 EFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFST 428
             +FYKNEGLTPYS AKLPITSDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISFST
Sbjct:   419 DFYKNEGLTPYSVAKLPITSDVPEGCVILREHVPISNLFTCLWFNEVDRFTSRDQISFST 478

Query:   429 VRDKLWAKTNWTVNMFLDCERRNFVVQKYHR 459
             VRDK+ AKTNWTV+MFLDCERRNFVVQ+YHR
Sbjct:   479 VRDKIAAKTNWTVSMFLDCERRNFVVQRYHR 509

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2037053 AT1G53040 [Arabidopsis thaliana (taxid:3702)]

 Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
 Identities = 271/449 (60%), Positives = 334/449 (74%)

Query:    18 PNLRLN-DSLSINYSESSPIYREQTKKMYNETSFNNIESQNSIANSVEAMDKMVSVRPIE 76
             PN+  + +++    S  +PI RE T   Y + S N+      + N +   D  V+  P  
Sbjct:    53 PNIHQSIETMDFG-SNQTPISRELTS-FYTKESDNDHVRDPFLWNGIGGSDVDVN-HP-- 107

Query:    77 STVFPPPPPSYFLGYTLPPGHPCNSFTLPPPPAD-KKRTGPRPCPVCYLPVEEVIALMPK 135
                 PP  PS+         HPC+SF+ PPPP    +R GPRPCPVCYLP EE +A MPK
Sbjct:   108 ----PPFLPSWH-------HHPCDSFSFPPPPPPGMRRPGPRPCPVCYLPPEEALAHMPK 156

Query:   136 VPSFSPVLKNLTYITE--PVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKG 193
              P  SP+LKNLTYI E  PV   E+E GGS+FGGYP L  R NS+DI+ESM+VHCGF+KG
Sbjct:   157 YPFESPLLKNLTYIREESPVKPEESE-GGSEFGGYPSLEHRTNSFDIKESMTVHCGFIKG 215

Query:   194 -KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDE 252
              KPG  TG+D+DE+ + +++Q H ++V SAIFG +D I +P NISE +RK + F MFVDE
Sbjct:   216 TKPGHQTGFDIDEDILHELDQSHDVIVASAIFGKYDIIQEPVNISEMARKNIPFYMFVDE 275

Query:   253 ETEAYLKANSGL-DRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 311
             ET  YLK  S   D  K++G+WRI+V+HN PY+DARR GK+PKLL HRLFPN R+S+W+D
Sbjct:   276 ETHLYLKNTSSYTDDNKRVGLWRIIVVHNVPYTDARRNGKVPKLLLHRLFPNVRYSIWVD 335

Query:   312 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 371
              KL+LVVDPYQILER LWR N++FAISRHY+RFDV VEAEANKAA+KYDNASID+Q+EFY
Sbjct:   336 AKLQLVVDPYQILERFLWRTNSSFAISRHYRRFDVFVEAEANKAARKYDNASIDYQVEFY 395

Query:   372 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 431
             K EGLTPY+EAKLPITSDVPEGC IIREH+PI+NLF C+WFNEVDRFTSRDQ+SF+  RD
Sbjct:   396 KKEGLTPYTEAKLPITSDVPEGCTIIREHIPITNLFTCVWFNEVDRFTSRDQLSFAIARD 455

Query:   432 KLWAKTNWTVNMFLDCERRNFVVQKYHRD 460
             K+  K +W++NMFLDCERRNFV Q YHRD
Sbjct:   456 KIREKVDWSINMFLDCERRNFVKQVYHRD 484

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2056750 AT2G02910 [Arabidopsis thaliana (taxid:3702)]

 Score = 719 (258.2 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
 Identities = 156/368 (42%), Positives = 220/368 (59%)

Query:   100 NSFTLPPPPADKKRTGPRPCPVCYLPVEEVIALMPKVPSFSPVLKNLTYITEPVLNREAE 159
             N   +  PP  KKRT   PC V   P+ E    + +   +     N T  +   +  E  
Sbjct:    98 NKSNIERPPGSKKRTKHLPCEV---PLAESADRILEPQDYL----NFTRFSLGFVETET- 149

Query:   160 FGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVV 219
             +    FGG+  L++R  SY    + ++HCGFVKG     TG+DL E+D   M+ C  + V
Sbjct:   150 YDNPRFGGHQTLSERERSYSA-VNQTIHCGFVKG-----TGFDLSEKDRAYMKNCV-VSV 202

Query:   220 VSAIFGAFDDINQPSN--ISEYSRKTVCFVMFVDEETEAYLKANSGL-DRTKKIGIWRIV 276
              S IFG+ D + +P+   ISE+S++ VCFVMFVDE+T + L +   + D+   +G+W+ V
Sbjct:   203 SSCIFGSSDFLRRPATKKISEFSKRNVCFVMFVDEQTLSKLASEGHVPDKQGFVGLWKTV 262

Query:   277 VIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFA 336
             V+ N PY+D R+TGK+PK L+HRLFP++R+S+W+D K+ L  DP  I++  LWR  + FA
Sbjct:   263 VVSNLPYNDMRKTGKVPKFLSHRLFPSSRYSIWLDSKMRLTTDPMLIIDFFLWRTKSEFA 322

Query:   337 ISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPY--SEAKLPITSDVPEGC 394
             IS HY R  V  E   NK   KY++++ID Q  FY+++GL  +  S+   P+ S VPEG 
Sbjct:   323 ISNHYDRHCVWDEVLQNKRLNKYNHSAIDEQFMFYRSDGLKKFDPSDPNSPLPSYVPEGS 382

Query:   395 VIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTN---WTVNMFLDCERRN 451
              I+R H P+SNLF CLWFNEVDRFTSRDQ+SF+    KL    +     +NMF DCERR 
Sbjct:   383 FIVRAHTPMSNLFTCLWFNEVDRFTSRDQLSFAYTYLKLQRLNSDRPLRLNMFKDCERRA 442

Query:   452 FVVQKYHR 459
                  +HR
Sbjct:   443 LTKLFHHR 450

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2136907 AT4G09630 [Arabidopsis thaliana (taxid:3702)]

 Score = 701 (251.8 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
 Identities = 146/305 (47%), Positives = 195/305 (63%)

Query:   165 FGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGR-GTGYDLDEEDILDMEQCHGIVVVSAI 223
             F G+  L +R +S+ ++E   +HCGFVK   G   TG+DL E+D   + +CH I V+S I
Sbjct:   396 FAGHQSLQEREDSFLVQEQ-KIHCGFVKAPEGLPSTGFDLTEDDANYISKCH-IAVISCI 453

Query:   224 FGAFDDINQPSN--ISEYSRKTVCFVMFVDEETEAYLKANSGL-DRTKKIGIWRIVVIHN 280
             FG  D +  P+N  +S  SRK VCFV+FVDE T   L A   + D    +G+W++VV+ N
Sbjct:   454 FGNSDRLRHPANKMVSSLSRKDVCFVVFVDEITMQTLSAEGQVPDGAGFVGLWKLVVVRN 513

Query:   281 PPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRH 340
              PY+D RR GKIPKLL HRLF +AR+S+W+D KL L +DP  ILE  LWR+   +AIS H
Sbjct:   514 LPYTDMRRVGKIPKLLPHRLFTSARYSIWLDSKLRLQLDPLVILEYFLWREGHEYAISNH 573

Query:   341 YKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEA---KLPITSDVPEGCVII 397
             Y R  +  E   NK   KY++  ID Q EFY+++GLT ++ +   KL + S+VPEG  I+
Sbjct:   574 YDRHCLWEEVAQNKKLNKYNHTVIDQQFEFYQSDGLTRFNASDPHKL-LPSNVPEGSFIV 632

Query:   398 REHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAK---TNWTVNMFLDCERRNFVV 454
             REH P+SNLF CLWFNEV+RFT RDQ+SF+    KL      T + ++MF DCERR    
Sbjct:   633 REHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLTRMNPDTPFNLHMFKDCERRKITK 692

Query:   455 QKYHR 459
                HR
Sbjct:   693 LFRHR 697

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2009253 EMB2756 "EMBRYO DEFECTIVE 2756" [Arabidopsis thaliana (taxid:3702)]

 Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
 Identities = 152/326 (46%), Positives = 201/326 (61%)

Query:   145 NLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRG-TGYDL 203
             +L YI +     E E     F G+  L +R +S+ + +   +HCGFVKG  G   TG+DL
Sbjct:   401 SLQYIEKEDKPDEEEQWEPRFAGHQSLQEREDSF-VAQDKKIHCGFVKGPKGSSSTGFDL 459

Query:   204 DEEDILDMEQCHGIVVVSAIFGAFDDINQPSN--ISEYSRKTVCFVMFVDEETEAYLKAN 261
              E+D   + +CH I V S IFG  D +  P+N  IS  SRK VCF++FVDE T   L A 
Sbjct:   460 TEDDTNYISRCH-IAVSSCIFGNSDRLRPPANKMISRLSRKNVCFIVFVDEITMQTLSAE 518

Query:   262 SGL-DRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDP 320
                 DR   IG+W++VV+ N PY+D RR GKIPK+L HRLFP+AR+S+W+D KL L +DP
Sbjct:   519 GHAPDRAGFIGLWKLVVVKNLPYADMRRVGKIPKMLPHRLFPSARYSIWLDSKLRLQLDP 578

Query:   321 YQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYS 380
               ILE  LWRK   +AIS HY R  +  E   NK   KY++  I+ Q +FYK +GLT ++
Sbjct:   579 LLILEYFLWRKGHEYAISNHYDRHCLWEEVAQNKKLNKYNHTVINQQFQFYKADGLTRFN 638

Query:   381 EA---KLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKT 437
              +   KL + S+VPEG  I+R H P+SNLF CLWFNEV+RFT RDQ+SF+    KL  + 
Sbjct:   639 ASDPFKL-LPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKL-RRM 696

Query:   438 N----WTVNMFLDCERRNFVVQKYHR 459
             N    + ++MF DCERR       HR
Sbjct:   697 NPDKPFNLHMFKDCERRKIAKLFRHR 722

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2121194 AT4G38500 [Arabidopsis thaliana (taxid:3702)]

 Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
 Identities = 150/349 (42%), Positives = 222/349 (63%)

Query:   118 PCPVCYLPVEEVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNS 177
             P PV Y P ++V  L+P   +   +++NLTY+TE   ++ ++F    FGG    ++R  S
Sbjct:   114 PIPVDYDP-DKV--LLPSDKTADTIVRNLTYVTEDESSK-SQF--PLFGGNISWSEREES 167

Query:   178 YDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNIS 237
             + ++  M VHCGF+   P RG G ++   D   +++C   VV + IF A+D+ +QPSNIS
Sbjct:   168 FKLKPEMKVHCGFM---P-RG-GAEMSSLDKEYVKKCR-FVVATGIFDAYDEPHQPSNIS 221

Query:   238 EYSRKTVCFVMFVDEETEAYLKANSGLDRTKK----IGIWRIVVIHNPPYSDARRTGKIP 293
             + S    CF+M VDE +  +L+ N+ + +  +    +GIWR++++  PPY + RR GK+P
Sbjct:   222 KRSMNLFCFLMVVDEVSLDFLRKNTTVRKDVEGGIWVGIWRLILLKTPPYDEPRRNGKVP 281

Query:   294 KLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEAN 353
             K+L HRLFP A++S+WIDGK+EL+VDP  ILER+LWR   TFAI++H    ++  EA+A 
Sbjct:   282 KILTHRLFPEAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRNIYEEADAC 341

Query:   354 KAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFN 413
             K  K+Y    +D  ++ Y+ EGL P+S  K  + SDVPEG VIIREH  ++NLF CLWFN
Sbjct:   342 KRRKRYARPLVDLHMKIYRYEGLEPWSIKKNTV-SDVPEGAVIIREHTAMNNLFSCLWFN 400

Query:   414 EVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRN-FVVQKYHRDH 461
             EV   T RDQ+SF  V D+L  K  + V MF +CE  + F +  + R+H
Sbjct:   401 EVHLLTPRDQLSFGYVVDRL--KGAFKVFMFQNCEYNSLFELHPHIREH 447

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2165457 AT5G42660 [Arabidopsis thaliana (taxid:3702)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 135/357 (37%), Positives = 199/357 (55%)

Query:   108 PADKKRTGPRPCPVCYLPVEEV--IALMPKVPSFSPVLKNLTYITEPVLN----REAEFG 161
             P  K   G R   +  LP EE+  + ++ +  S SPV K + Y+T+  ++    R     
Sbjct:   103 PTTKVIGGVRQRCLKLLPPEELEHLDILERKDSGSPV-KRVVYLTDTDVSVGEMRGVRGN 161

Query:   162 GSDFG---GYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIV 218
             G+ F    G    A+R NS+ +RE++S+HCGF         G+ + ++D   M  C  +V
Sbjct:   162 GTRFNLFTGNQTFAERENSFQVRETVSLHCGFFN----ENGGFRISDKDKKFMTSCE-VV 216

Query:   219 VVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSG-LDRTKKIGIWRIVV 277
             V +  FG  D++ +P  +S+ S + VC+V F DE T    +A    +D    IG WRIV+
Sbjct:   217 VSTCAFGGGDNLYEPIGMSKTSSQKVCYVAFWDEVTLTTQEAEGHKIDENDHIGKWRIVI 276

Query:   278 IHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAI 337
             + + P++D R  GKIPK+LAHRLFP+A++S+W+D K +   DP  +L+  LWR N+  AI
Sbjct:   277 VKDLPFTDQRLNGKIPKMLAHRLFPDAKYSIWVDSKSQFRRDPLGVLDALLWRTNSVLAI 336

Query:   338 SRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVII 397
             S H  R  V  EA A     K     ++ QI  Y+++ L P  + +      + E  VI+
Sbjct:   337 SEHGARSSVYDEANAVIKKHKATPEEVEVQINQYRHDKL-P-EDKRFNGKKALSEASVIV 394

Query:   398 REHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWA-KTNWTVNMFLDCERRNFV 453
             REH P++NLF+CLWFNEV RFTSRDQ+SF  V   LW  K    +NMF  C R++ V
Sbjct:   395 REHTPLTNLFMCLWFNEVVRFTSRDQLSFPYV---LWRLKVLKNINMFPVCTRKDLV 448

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2162065 AT5G46220 [Arabidopsis thaliana (taxid:3702)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 121/348 (34%), Positives = 182/348 (52%)

Query:   120 PVCYLPVEEVIALMPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYD 179
             P+ +     V+  +  + S S   +NL YI      +   FGG+ F      +  N+S +
Sbjct:    82 PIFFSDYWTVLKEIQSILSGSSPKENLRYIN----GKSESFGGN-FSTQKRFSYFNHS-N 135

Query:   180 IRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEY 239
             I   + V CGF +  P       +   D ++ME+C G+VV SAIF   D I QP  +   
Sbjct:   136 I--DVEVPCGFFRDFP-------VSNSDRVEMEKC-GLVVASAIFNDHDKIRQPVGLGVK 185

Query:   240 SRKTVCFVMFVDEET-EAYLKANSGLDRTK---KIGIWRIVVIHNPP--YSDARRTGKIP 293
             + +TVCF MF+D++T  +    N  L       ++G WRI+ I      Y +    G IP
Sbjct:   186 TLETVCFYMFIDDKTLNSLFHHNVILKNNPSDYRVGAWRIIKISKSENLYLNPAMNGVIP 245

Query:   294 KLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEAN 353
             K L HRLFPN++FS+W+D K++L++DP  ++   L       AIS+H    + + EA A 
Sbjct:   246 KYLIHRLFPNSKFSIWVDAKIQLMIDPLLLIHSMLVVPEVDMAISKHPFFVNTMEEAMAT 305

Query:   354 KAAKKY-DNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWF 412
                KK+ D   +  Q+E Y   GL P+S +KLP  +DVP+  +I+R H   SNLF C  F
Sbjct:   306 ARWKKWGDVDGLRIQMETYCEHGLKPWSSSKLPYPTDVPDTALILRRHGIRSNLFSCFMF 365

Query:   413 NEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRD 460
             NE++ F  RDQ++F+ VRD +  K    +NMF + E    VV +Y  +
Sbjct:   366 NELEAFNPRDQLAFAFVRDHINPKVK--MNMF-EVEVFEQVVVEYRHN 410


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      542       497   0.00084  119 3  11 22  0.40    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  314 KB (2161 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  46.36u 0.10s 46.46t   Elapsed:  00:00:05
  Total cpu time:  46.36u 0.10s 46.46t   Elapsed:  00:00:06
  Start:  Tue May 21 05:37:27 2013   End:  Tue May 21 05:37:33 2013

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_IV3066 SubName- Full=Putative uncharacterized protein; (591 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	542
pfam04765	306	pfam04765, DUF616, Protein of unknown function (DU	0.0

>gnl|CDD|218253 pfam04765, DUF616, Protein of unknown function (DUF616)

 Score =  513 bits (1322), Expect = 0.0
 Identities = 187/315 (59%), Positives = 231/315 (73%), Gaps = 10/315 (3%)

Query: 145 NLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLD 204
           NLTYI E   N+   +GG  FGG   L +R +S+D +E+M+VHCGFVK      TG+D+ 
Sbjct: 1   NLTYIEEEEKNKG--YGGPLFGGNQSLEERESSFDHKETMTVHCGFVK----PNTGFDIS 54

Query: 205 EEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANS-G 263
           E D   ME+C  +VV SAIFG +D I QP  IS+ S+K VCFVMFVDEET + LK+    
Sbjct: 55  ESDRKYMEKCR-VVVASAIFGDYDKIRQPKGISKRSKKNVCFVMFVDEETLSTLKSEGHV 113

Query: 264 LDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQI 323
            D   ++G+WRIVV+ N PY+D RR GK+PK L HRLFPNAR+S+W+D KL+LVVDP  I
Sbjct: 114 PDDNGRVGLWRIVVVKNLPYTDPRRNGKVPKYLLHRLFPNARYSIWVDAKLQLVVDPLLI 173

Query: 324 LERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAK 383
           LER LWR N+ FAIS+HY R  V  EAEANK  KKY +ASID Q+EFY ++GLTP+S+ K
Sbjct: 174 LERFLWRTNSDFAISKHYFRHCVYEEAEANKRWKKYGDASIDEQMEFYCSDGLTPWSDPK 233

Query: 384 LPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNM 443
           LP+ SDVPEG VI+REH P+SNLF CLWFNEVDRFTSRDQ+SF+ VRDKL  +  + +NM
Sbjct: 234 LPLPSDVPEGAVIVREHTPMSNLFSCLWFNEVDRFTSRDQLSFAYVRDKL--RPKFKMNM 291

Query: 444 FLDCERRNFVVQKYH 458
           F DCERR+ VV   H
Sbjct: 292 FKDCERRSLVVLYRH 306

Family of uncharacterized proteins. Length = 306

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	542
PF04765	305	DUF616: Protein of unknown function (DUF616); Inte	100.0
cd04194	248	GT8_A4GalT_like A4GalT_like proteins catalyze the	94.43
cd00505	246	Glyco_transf_8 Members of glycosyltransferase fami	92.1
PF01501	250	Glyco_transf_8: Glycosyl transferase family 8; Int	90.22

>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function

Probab=100.00  E-value=1.4e-114  Score=872.25  Aligned_cols=304  Identities=59%  Similarity=1.005  Sum_probs=297.2

Q ss_pred             ceeeeecCCccccccCCCCCCCCCCChhhcccccccCCCeeeecccccCCCCCCCCccCChhhHHHHhccCcEEEEEeee
Q 009158          145 NLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIF  224 (542)
Q Consensus       145 ~l~Yi~~~~~~~~~~~~~~~FgG~~s~~~R~~sf~~~~~~~vhCGF~~g~pg~~~Gf~i~e~D~~~m~~CkkVVVYTAIF  224 (542)
                      ||+||.+|+++.  +.++++|||||||+||++||+++++|+|||||++     ||||||+|.|+.||++|+ ||||||||
T Consensus         1 nl~y~~~~~~~~--~~~~~~f~g~~s~~~R~~sf~~~~~~~v~Cgf~~-----~~gf~i~~~d~~~m~~c~-vvV~saIF   72 (305)
T PF04765_consen    1 NLTYIEEENKPE--SGRGPSFGGNQSLEERESSFDIQEDMTVHCGFVK-----NTGFDISESDRRYMEKCR-VVVYSAIF   72 (305)
T ss_pred             CCcccccccccc--cCCCCCcCCcCCHHHHHHhcCCCCCceecccccc-----CCCCCCCHHHHHHHhcCC-EEEEEEec
Confidence            799999998765  7889999999999999999999999999999999     799999999999999999 99999999


Q ss_pred             CCCcccCCCCCCCcccCCCeeEEEEechhhHHHHhhccCC-CCCccccceEEEEcCCCCCCCccccCCcceecccccCCC
Q 009158          225 GAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGL-DRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPN  303 (542)
Q Consensus       225 GnYD~L~qP~~Is~~s~~~VcFicFTDe~tl~~l~~~~~~-~~~~k~G~WrIV~V~~lpy~D~rRngRipKiLpHrLFPn  303 (542)
                      |+||+|+||++|++++.++|||+||||+.|+++|+++|.+ ++++++|+||||+|+++||+|+|||||+||||+|+||||
T Consensus        73 G~yD~l~qP~~i~~~s~~~vcf~mF~D~~t~~~l~~~~~~~~~~~~ig~WrIv~v~~lp~~d~rr~~r~~K~lpHrlfp~  152 (305)
T PF04765_consen   73 GNYDKLRQPKNISEYSKKNVCFFMFVDEETLKSLESEGHIPDENKKIGIWRIVVVKNLPYDDPRRNGRIPKLLPHRLFPN  152 (305)
T ss_pred             CCCccccCchhhCHHHhcCccEEEEEehhhHHHHHhcCCccccccccCceEEEEecCCCCcchhhcCcccceeccccCCC
Confidence            9999999999999999999999999999999999998865 888999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHHHHHHcCCCCcccCC
Q 009158          304 ARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAK  383 (542)
Q Consensus       304 yrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIskHp~R~cVYEEAeac~r~~K~d~~~I~~Qme~Yr~eGLp~~s~~k  383 (542)
                      |+|||||||||+|++||++||+++||+++++|||++||.|+||||||+||++++||+.+.|++||++|+++|||+|+.+|
T Consensus       153 y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H~~R~cvyeEa~a~~~~~k~~~~~I~~Qm~~Y~~eGlp~~s~~k  232 (305)
T PF04765_consen  153 YDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKHPERNCVYEEAEACKRLGKYDPERIDEQMEFYKQEGLPPWSPAK  232 (305)
T ss_pred             CceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcceEEEcccCCchhHHHHHHHHHHhcCCCCCCchHHHHHhhhccCCCccccccccchhhhhhhhccc
Q 009158          384 LPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYH  458 (542)
Q Consensus       384 lP~~sgLpE~~VIIR~Htp~snlFmclWFnEv~rfS~RDQLSF~YVl~Kl~~~~~~~lnMF~dcerr~~v~~~~h  458 (542)
                      +|+.+|||||+||||+|++++|+|||+|||||++||+||||||+||+||+++  +|++|||+||||+++|++++|
T Consensus       233 ~~l~s~v~E~~iIiR~H~~~~nlf~clWfnEv~rfs~RDQLSF~Yv~wk~~~--~~~~~mf~~~~~~~~~~~~~h  305 (305)
T PF04765_consen  233 LPLPSDVPEGNIIIRKHNPMSNLFMCLWFNEVERFSPRDQLSFPYVLWKLGP--KFKLNMFKDCERRQLVVLYRH  305 (305)
T ss_pred             cccccCCccceEEEecCCchhHHHHHHHHHHHhcCCCcccchHHHHHHHhCC--cccchhhhHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999999999999999998  599999999999999999998

The function of is unknown although a number of the members are thought to be glycosyltransferases.

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface

Probab=94.43  E-value=0.069  Score=51.74  Aligned_cols=97  Identities=19%  Similarity=0.219  Sum_probs=59.4

Q ss_pred             CCeeEEEEechhhHHHHhhccCCCCCccccceEEEEcCCCCCCCcc-ccCC-----cceecccccCCCCCEEEEEeCceE
Q 009158          242 KTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDAR-RTGK-----IPKLLAHRLFPNARFSLWIDGKLE  315 (542)
Q Consensus       242 ~~VcFicFTDe~tl~~l~~~~~~~~~~k~G~WrIV~V~~lpy~D~r-RngR-----ipKiLpHrLFPnyrYSIWIDgkIq  315 (542)
                      ..++|++++|+.+......-..+.... ....+++.++...+.+.. ...+     +.|++...+||+|+.-||||+-+.
T Consensus        29 ~~~~~~il~~~is~~~~~~L~~~~~~~-~~~i~~~~i~~~~~~~~~~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~l  107 (248)
T cd04194          29 RDYDFYILNDDISEENKKKLKELLKKY-NSSIEFIKIDNDDFKFFPATTDHISYATYYRLLIPDLLPDYDKVLYLDADII  107 (248)
T ss_pred             CceEEEEEeCCCCHHHHHHHHHHHHhc-CCeEEEEEcCHHHHhcCCcccccccHHHHHHHHHHHHhcccCEEEEEeCCEE
Confidence            478999999875443222111110000 123344544332121111 1222     348899999999999999999999


Q ss_pred             EecCHHHHHHHHhhccCCeEEEecCC
Q 009158          316 LVVDPYQILERHLWRKNATFAISRHY  341 (542)
Q Consensus       316 L~~DP~~LLe~~Lwr~n~~~AIskHp  341 (542)
                      +.+|+..|.+.-+  ++..+|+..|.
T Consensus       108 v~~di~~L~~~~~--~~~~~aa~~d~  131 (248)
T cd04194         108 VLGDLSELFDIDL--GDNLLAAVRDP  131 (248)
T ss_pred             ecCCHHHHhcCCc--CCCEEEEEecc
Confidence            9999999987544  56778887764

The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis

Probab=92.10  E-value=0.88  Score=44.47  Aligned_cols=160  Identities=13%  Similarity=0.191  Sum_probs=93.0

Q ss_pred             CCeeEEEEechhhHHHHhhccCCCCCccccceEEEEcCCCCCC------CccccCCcceecccccCCCCCEEEEEeCceE
Q 009158          242 KTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYS------DARRTGKIPKLLAHRLFPNARFSLWIDGKLE  315 (542)
Q Consensus       242 ~~VcFicFTDe~tl~~l~~~~~~~~~~k~G~WrIV~V~~lpy~------D~rRngRipKiLpHrLFPnyrYSIWIDgkIq  315 (542)
                      +.+.|+.++|..+....+.-..+... .....+++.++...+.      ......-+.|++...|||+++--||+|+-+.
T Consensus        29 ~~~~~~il~~~is~~~~~~L~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~i  107 (246)
T cd00505          29 KPLRFHVLTNPLSDTFKAALDNLRKL-YNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLPNLVPDYDKILYVDADIL  107 (246)
T ss_pred             CCeEEEEEEccccHHHHHHHHHHHhc-cCceEEEEeccccCcchhhhhcCccccceeHHHHHHHHhhccCeEEEEcCCee
Confidence            47889999988554322211111000 0123445555422221      2223445789999999999999999999999


Q ss_pred             EecCHHHHHHHHhhccCCeEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHHHH-HHcCCCCcccCCCCCCCCCCcce
Q 009158          316 LVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY-KNEGLTPYSEAKLPITSDVPEGC  394 (542)
Q Consensus       316 L~~DP~~LLe~~Lwr~n~~~AIskHp~R~cVYEEAeac~r~~K~d~~~I~~Qme~Y-r~eGLp~~s~~klP~~sgLpE~~  394 (542)
                      +..|+..|.+--+  ++..+|+..-..    .      ....           +.| +..|++.        ....+-++
T Consensus       108 v~~di~~L~~~~l--~~~~~aav~d~~----~------~~~~-----------~~~~~~~~~~~--------~~~yfNsG  156 (246)
T cd00505         108 VLTDIDELWDTPL--GGQELAAAPDPG----D------RREG-----------KYYRQKRSHLA--------GPDYFNSG  156 (246)
T ss_pred             eccCHHHHhhccC--CCCeEEEccCch----h------hhcc-----------chhhcccCCCC--------CCCceeee
Confidence            9999999998666  566788864321    0      0000           111 1223321        22345567


Q ss_pred             EEEcccCC-----chhHHHHHHHHHHhcCCCCCCchHHHHHhhh
Q 009158          395 VIIREHVP-----ISNLFVCLWFNEVDRFTSRDQISFSTVRDKL  433 (542)
Q Consensus       395 VIIR~Htp-----~snlFmclWFnEv~rfS~RDQLSF~YVl~Kl  433 (542)
                      |++=+-..     +.......|.+...+..--||=.++.++...
T Consensus       157 Vmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~  200 (246)
T cd00505         157 VFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQV  200 (246)
T ss_pred             eEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcC
Confidence            77732221     2222234455556678889999999998874

Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=90.22  E-value=0.47  Score=44.39  Aligned_cols=115  Identities=15%  Similarity=0.166  Sum_probs=65.0

Q ss_pred             CCcceecccccCCCCCEEEEEeCceEEecCHHHHHHHHhhccCCeEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHH
Q 009158          290 GKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIE  369 (542)
Q Consensus       290 gRipKiLpHrLFPnyrYSIWIDgkIqL~~DP~~LLe~~Lwr~n~~~AIskHp~R~cVYEEAeac~r~~K~d~~~I~~Qme  369 (542)
                      .-+.|++.+.+|++|+--||+|+-+.+.+|+..|.+.-+  ++..+|+...                         ....
T Consensus        85 ~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~--~~~~~~a~~~-------------------------~~~~  137 (250)
T PF01501_consen   85 ATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDL--QGKYLAAVED-------------------------ESFD  137 (250)
T ss_dssp             GGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC-----TTSSEEEEE-----------------------------H
T ss_pred             HHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccc--hhhhcccccc-------------------------chhh
Confidence            344699999999999999999999999999999998666  3566777665                         0001


Q ss_pred             HHHHcCCCCcccCCCCCCCCCCcceEEEcccCCch-hHHHHHHHHHHh----cCCCCCCchHHHHHhh
Q 009158          370 FYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPIS-NLFVCLWFNEVD----RFTSRDQISFSTVRDK  432 (542)
Q Consensus       370 ~Yr~eGLp~~s~~klP~~sgLpE~~VIIR~Htp~s-nlFmclWFnEv~----rfS~RDQLSF~YVl~K  432 (542)
                      .+ ..+-........+...+.+-++|++=+-.... +.+...+.+.+.    +..-.||=-|++++..
T Consensus       138 ~~-~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~  204 (250)
T PF01501_consen  138 NF-PNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYG  204 (250)
T ss_dssp             HH-HTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTT
T ss_pred             hh-hhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccc
Confidence            11 11111111222334566777887774332211 112222222222    2455899999999884

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	542
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 3e-08
 Identities = 53/383 (13%), Positives = 110/383 (28%), Gaps = 126/383 (32%)

Query: 158 AEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGI 217
            +F  +    +  L   + +    E  S+   ++  +P      DL  E    +   +  
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ-----DLPRE----VLTTNPR 328

Query: 218 VVVSAIFGAF--DDINQPSNISEYSRKTVCFVM--FVDEETEAYLKANSGLDRTKKIGIW 273
            +  +I      D +    N    +   +  ++   ++    A  +         ++ ++
Sbjct: 329 RL--SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR-----KMFDRLSVF 381

Query: 274 RIVVIHNPPYSDARRTGKIP-KLLAHRLFPNARFSLWIDGK---LELVVDP---YQILER 326
                       A     IP  LL+          +W D     + +VV+    Y ++E+
Sbjct: 382 P---------PSA----HIPTILLS---------LIWFDVIKSDVMVVVNKLHKYSLVEK 419

Query: 327 HLWRKNATFAISRHYKRFDVLVEAEAN---------KAAKKYDNASIDFQIE---FYKNE 374
               K +T +I   Y    V +E E              K +D+  +        FY + 
Sbjct: 420 --QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477

Query: 375 GLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKL- 433
           G   +    +              EH     LF  ++ +   RF          +  K+ 
Sbjct: 478 G---HHLKNI--------------EHPERMTLFRMVFLD--FRF----------LEQKIR 508

Query: 434 -----WAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPP 488
                W  +   +N           ++ Y + +I  N                   P   
Sbjct: 509 HDSTAWNASGSILNTLQQ-------LKFY-KPYICDN------------------DPKYE 542

Query: 489 ALVSDLPKKFPLETTGERVVRVP 511
            LV+ +   F L    E ++   
Sbjct: 543 RLVNAI-LDF-LPKIEENLICSK 563

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 3e-06
 Identities = 60/372 (16%), Positives = 107/372 (28%), Gaps = 119/372 (31%)

Query: 190 FVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDI-NQPSNISEYSRKTVCFVM 248
           FV          + D +D+ DM +    ++        D I      +S   R    F  
Sbjct: 29  FVD---------NFDCKDVQDMPK---SILSKE---EIDHIIMSKDAVSGTLR---LFWT 70

Query: 249 FVDEETEAYLKA-NSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFS 307
            + ++ E   K     L    K   + +  I       +  T         R++   R  
Sbjct: 71  LLSKQEEMVQKFVEEVLRINYK---FLMSPIKTEQRQPSMMT---------RMYIEQRDR 118

Query: 308 LWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFD----VLVE--AEANK---AAKK 358
           L+ D +   V   Y     ++ R      + +          VL++    + K   A   
Sbjct: 119 LYNDNQ---VFAKY-----NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170

Query: 359 YDNASI----DFQIEFYKNEG------------------LTPYSEAKLPITSDVPEGCVI 396
             +  +    DF+I F+ N                    + P   ++   +S++      
Sbjct: 171 CLSYKVQCKMDFKI-FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 397 IREHVPISNLFV------CL------WFNEV-DRF--------TSRDQISFSTVRDKLWA 435
           I+    +  L        CL         +  + F        T+R       V D L A
Sbjct: 230 IQAE--LRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF----KQVTDFLSA 283

Query: 436 KTNWTVNMFLDCERRNF-------VVQKY--HRDHILPNPPPVPVDLEPPPLSLAVEAPP 486
            T  T ++ LD             ++ KY   R   LP        L   P  L++ A  
Sbjct: 284 AT--TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP-----REVLTTNPRRLSIIA-- 334

Query: 487 PPALVSDLPKKF 498
               + D    +
Sbjct: 335 --ESIRDGLATW 344

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	542
d1ga8a_	282	Galactosyltransferase LgtC {Neisseria meningitidis	93.82

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=93.82  E-value=0.074  Score=48.39  Aligned_cols=157  Identities=13%  Similarity=0.109  Sum_probs=88.8

Q ss_pred             CCeeEEEEechhhHHHHhhc-cCCCCCccccceEEEEcCCCCC-CCccccCC-----cceecccccCCCCCEEEEEeCce
Q 009158          242 KTVCFVMFVDEETEAYLKAN-SGLDRTKKIGIWRIVVIHNPPY-SDARRTGK-----IPKLLAHRLFPNARFSLWIDGKL  314 (542)
Q Consensus       242 ~~VcFicFTDe~tl~~l~~~-~~~~~~~k~G~WrIV~V~~lpy-~D~rRngR-----ipKiLpHrLFPnyrYSIWIDgkI  314 (542)
                      ..+.|++++|+.+......- ..+ ... .-.-+.+.+...-+ ..+....+     +.|++.+.+||+++-.||||+=+
T Consensus        29 ~~~~~~il~~~~~~~~~~~l~~~~-~~~-~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~  106 (282)
T d1ga8a_          29 TEIRFHVLDAGISEANRAAVAANL-RGG-GGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDV  106 (282)
T ss_dssp             SCCEEEEEESSCCHHHHHHHHHTS-GGG-TTTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSE
T ss_pred             CCEEEEEEcCCCCHHHHHHHHHHH-HHc-CCeEEEEECCchHhccccccccccCHHHHHHHHHhhhCCccceEEEecCCE
Confidence            46788888886554432211 111 111 12334455532111 11212222     46788889999999999999999


Q ss_pred             EEecCHHHHHHHHhhccCCeEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHHHHHHcCCCCcccCCCCCCCCCCcce
Q 009158          315 ELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGC  394 (542)
Q Consensus       315 qL~~DP~~LLe~~Lwr~n~~~AIskHp~R~cVYEEAeac~r~~K~d~~~I~~Qme~Yr~eGLp~~s~~klP~~sgLpE~~  394 (542)
                      .+..|+..|.+--+  ++..+|+..+...                     ..+-......|+.+        ....+-+|
T Consensus       107 iv~~dl~~L~~~~~--~~~~~aa~~d~~~---------------------~~~~~~~~~~~~~~--------~~~yfNsG  155 (282)
T d1ga8a_         107 LVRDSLTPLWDTDL--GDNWLGASIDLFV---------------------ERQEGYKQKIGMAD--------GEYYFNAG  155 (282)
T ss_dssp             EECSCCHHHHTCCC--TTCSEEEEECHHH---------------------HTSTTHHHHTTCCT--------TSCCEEEE
T ss_pred             EEecchHHHHhccc--ccceeeeehhhhh---------------------hhhhhhHHHhCCCC--------CCceeecc
Confidence            99999999886444  4566777654210                     01112233456643        34556778


Q ss_pred             EEEccc-----CCchhHHHHHHHHHH-hcCCCCCCchHHHHHhh
Q 009158          395 VIIREH-----VPISNLFVCLWFNEV-DRFTSRDQISFSTVRDK  432 (542)
Q Consensus       395 VIIR~H-----tp~snlFmclWFnEv-~rfS~RDQLSF~YVl~K  432 (542)
                      |++=..     ..+...++ .|.++. ..+.--||=.|+.++..
T Consensus       156 Vml~n~~~~r~~~~~~~~~-~~~~~~~~~~~~~DQd~LN~~f~~  198 (282)
T d1ga8a_         156 VLLINLKKWRRHDIFKMSS-EWVEQYKDVMQYQDQDILNGLFKG  198 (282)
T ss_dssp             EEEECHHHHTTSCHHHHHH-HHHHHHTTTCSSTHHHHHHHHHTT
T ss_pred             eeeechhhhhhhhHHHHHH-HHHHhcccCcccCchhHHHHHhcC
Confidence            876432     13344433 444554 34556899999988753