Citrus Sinensis ID: 009200

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

MALTTRQRRPLPSDPPPSSPIYTKYDKPSRRLGDGGREEEKSLGWFVPVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQAFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYNVVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDDAGPGSVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTLGGTSAAPSYFNNENKASDQQFVILPLPAGLIEIYTALCLCILHPLFLFFCEVTKLTFYIAAPGC

ccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcHHHcHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEcHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccEEEEccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccEEEEEEccccccc

ccHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccHHHHccccHHHHHHccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccEEEEEccEEEEcccccEcccccEEEEEEEccccccccccccccccccEEcccccccccccccccEEccccccEEEEcccccccccccccEEEEEEEEEEEEEEEcccc

malttrqrrplpsdpppsspiytkydkpsrrlgdggreeekslgwfvpVFALGMLRYMSATTNiihdcdevfnywePLHYLLYKSGFQTWEYSSEFALRSYLYILFHELvgrpaswlfaedKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTsgcffastsflpssfSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQAFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYNVVgggeshlygiegPLYYLRNAFNNFNFGFVLALLFVGILpiarkkyapglvVVVSPVYIWLLFMsmqphkeerflypiypLICVAASAviesfpdifrdkydpnanfvMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQhhddagpgsvvcvgsewhrypssffipnyvgevrwlddgfrgllplpfnstlggtsaapsyfnnenkasdqqfvilplpaGLIEIYTALCLCILHPLFLFFCEVTKLTFYIAAPGC

malttrqrrplpsdpppsspiytkydkpsrrlgdggreeekslgWFVPVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQAFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYNVVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDDAGPGSVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTLGGTSAAPSYFNNENKASDQQFVILPLPAGLIEIYTALCLCILHPLFLFFCEVTKLTFYIAAPGC

MALTTRQRRplpsdpppsspIYTKYDKPSRRLGDGGREEEKSLGWFVPVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQAFLAGAATSVTLLALSVFVDYQYYRRWTSSvlnlvvynvvgggESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDDAGPGSVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTLGGTSAAPSYFNNENKASDQQFVILPLPAGLIEIYTALCLCILHPLFLFFCEVTKLTFYIAAPGC

******************************************LGWFVPVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQAFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYNVVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDDAGPGSVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTLGGTSAAPSYFN*****SDQQFVILPLPAGLIEIYTALCLCILHPLFLFFCEVTKLTFYIAA***

********************************************WFVPVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQAFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYNVVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDDAGPGSVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTLGGTSAAPSYFNNENKASDQQFVILPLPAGLIEIYTALCLCILHPLFLFFCEVTKLTFYIAAPGC

****************PSSPIYTKYDKPSRRLGDGGREEEKSLGWFVPVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQAFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYNVVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDDAGPGSVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTLGGTSAAPSYFNNENKASDQQFVILPLPAGLIEIYTALCLCILHPLFLFFCEVTKLTFYIAAPGC

****************************************KSLGWFVPVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQAFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYNVVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDDAGPGSVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTLGGTSAAPSYFNNENKASDQQFVILPLPAGLIEIYTALCLCILHPLFLFFCEVTKLTFYIAAPGC

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		540	2.2.26 [Sep-21-2011]
Q9FZ49		570	Dol-P-Man:Man(6)GlcNAc(2)	yes	no	0.911	0.863	0.734	0.0
Q8VDI9		611	Alpha-1,2-mannosyltransfe	yes	no	0.822	0.726	0.364	5e-74
Q9H6U8		611	Alpha-1,2-mannosyltransfe	yes	no	0.827	0.731	0.354	1e-71
P54002		603	Putative glycosyltransfer	yes	no	0.868	0.777	0.325	1e-63
Q9P7Q9		577	Alpha-1,2-mannosyltransfe	yes	no	0.835	0.781	0.339	7e-61
P53868		555	Alpha-1,2-mannosyltransfe	yes	no	0.768	0.747	0.298	6e-43
Q23361		492	Probable Dol-P-Man:Man(7)	no	no	0.455	0.5	0.258	2e-08
Q1LZA0		541	GPI mannosyltransferase 3	no	no	0.587	0.585	0.252	6e-08
Q9JJQ0		542	GPI mannosyltransferase 3	no	no	0.509	0.507	0.250	8e-07
Q92521		554	GPI mannosyltransferase 3	no	no	0.618	0.602	0.222	1e-06

>sp\|Q9FZ49\|ALG9_ARATH Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG9 PE=1 SV=1	Back alignment and function desciption

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/497 (73%), Positives = 429/497 (86%), Gaps = 5/497 (1%)

Query: 4   TTRQRRPL--PSDPPPSSPIYTKYDKPSRRLGDGGREEEKSLGWFVPVFALGMLRYMSAT 61
           TTRQRRPL   S    S+  Y+K DKP R   +GG  E+  L WF+P  AL  LRYMSAT
Sbjct: 5   TTRQRRPLISDSSSSSSTKSYSKTDKPGR--SNGGDAEDGGLRWFLPFIALCYLRYMSAT 62

Query: 62  TNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAED 121
           +NIIHDCDEVFNYWEPLHY+LYKSGFQTWEYSS FALRSYLYILFHEL GRPASW F +D
Sbjct: 63  SNIIHDCDEVFNYWEPLHYILYKSGFQTWEYSSNFALRSYLYILFHELAGRPASWWFGDD 122

Query: 122 KVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSS 181
           KVRVFYAVRLFLGL+S  +D VLVVALSRKYG+R+A+Y +AMLCLTSGCFFASTSFLPSS
Sbjct: 123 KVRVFYAVRLFLGLVSAVSDTVLVVALSRKYGKRIATYAVAMLCLTSGCFFASTSFLPSS 182

Query: 182 FSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQAFLAGA 241
           FSMYAISL+SG  L EKYAMAVAVS  GVILGWPFSILAFLPVV YSL +RFKQAF+AGA
Sbjct: 183 FSMYAISLSSGLLLFEKYAMAVAVSVVGVILGWPFSILAFLPVVIYSLVKRFKQAFIAGA 242

Query: 242 ATSVTLLALSVFVDYQYYRRWTSSVLNLVVYNVVGGGESHLYGIEGPLYYLRNAFNNFNF 301
            T++ LL +S+ VDY YY+RWTSSVLNL++YNV+GGGESHLYG EG L+Y+RN FNNFNF
Sbjct: 243 VTTIFLLGVSLLVDYYYYKRWTSSVLNLLIYNVLGGGESHLYGTEGALFYIRNGFNNFNF 302

Query: 302 GFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLICVAAS 361
            F+LA+LFV I P+ R+KY   L+VV+SP+YIWL FMS+QPHKEERFLYPIYPLICV+AS
Sbjct: 303 CFILAMLFVAIYPVIRRKYDRALLVVISPMYIWLAFMSLQPHKEERFLYPIYPLICVSAS 362

Query: 362 AVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYK 421
           AVIE+ P++FR+KY    + ++VT  K +RP +LG ILCASHSRTF+L+NGY+AP+EVYK
Sbjct: 363 AVIENIPELFREKYSSRES-LLVTITKYMRPVILGCILCASHSRTFALINGYSAPLEVYK 421

Query: 422 ILQHHDDAGPGSVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTLGGTSA 481
           +L+HHDDAGPGSV+CVGSEWHRYPSSFF+P+Y+ EVRW+DDGFRGLLP PFN+TLGGTSA
Sbjct: 422 LLEHHDDAGPGSVLCVGSEWHRYPSSFFVPHYISEVRWIDDGFRGLLPFPFNNTLGGTSA 481

Query: 482 APSYFNNENKASDQQFV 498
           +P YFNN+N+AS++Q++
Sbjct: 482 SPPYFNNKNQASEEQYL 498

Required for N-linked oligosaccharide assembly. Adds the seventh and the ninth mannose residues in an alpha-1,2 linkage onto the dolichol-PP-oligosaccharide precursors dolichol-PP-Man(6)GlcNAc(2) and dolichol-PP-Man(8)GlcNAc(2).
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 6EC: 1

>sp\|Q8VDI9\|ALG9_MOUSE Alpha-1,2-mannosyltransferase ALG9 OS=Mus musculus GN=Alg9 PE=2 SV=1	Back alignment and function description

>sp\|Q9H6U8\|ALG9_HUMAN Alpha-1,2-mannosyltransferase ALG9 OS=Homo sapiens GN=ALG9 PE=1 SV=2	Back alignment and function description

>sp\|P54002\|YTH3_CAEEL Putative glycosyltransferase C14A4.3 OS=Caenorhabditis elegans GN=C14A4.3 PE=1 SV=2	Back alignment and function description

>sp\|Q9P7Q9\|ALG9_SCHPO Alpha-1,2-mannosyltransferase alg9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg9 PE=3 SV=1	Back alignment and function description

>sp\|P53868\|ALG9_YEAST Alpha-1,2-mannosyltransferase ALG9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG9 PE=1 SV=1	Back alignment and function description

>sp\|Q23361\|ALG12_CAEEL Probable Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Caenorhabditis elegans GN=ZC513.5 PE=1 SV=2	Back alignment and function description

>sp\|Q1LZA0\|PIGB_BOVIN GPI mannosyltransferase 3 OS=Bos taurus GN=PIGB PE=2 SV=1	Back alignment and function description

>sp\|Q9JJQ0\|PIGB_MOUSE GPI mannosyltransferase 3 OS=Mus musculus GN=Pigb PE=1 SV=2	Back alignment and function description

>sp\|Q92521\|PIGB_HUMAN GPI mannosyltransferase 3 OS=Homo sapiens GN=PIGB PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		540
449516752		571	PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-	0.916	0.866	0.758	0.0
225461656		570	PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-	0.918	0.870	0.792	0.0
147839188		570	hypothetical protein VITISV_019598 [Viti	0.918	0.870	0.792	0.0
449456581		571	PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-	0.916	0.866	0.756	0.0
356549667		564	PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-	0.903	0.865	0.767	0.0
356544088		564	PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-	0.909	0.870	0.757	0.0
255564762		567	glycosyltransferase, putative [Ricinus c	0.916	0.873	0.784	0.0
357452219		568	Alpha-1 2-mannosyltransferase ALG9 [Medi	0.905	0.860	0.743	0.0
297850092		570	sugar binding protein [Arabidopsis lyrat	0.911	0.863	0.738	0.0
145335796		570	alpha-1,2-mannosyltransferase [Arabidops	0.911	0.863	0.734	0.0

>gi\|449516752\|ref\|XP_004165410.1\| PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus]	Back alignment and taxonomy information

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/502 (75%), Positives = 438/502 (87%), Gaps = 7/502 (1%)

Query: 1   MALTTRQRRPLPSDPPPSSPIYTKY----DKPSRRLGDGGREEEKSLGWFVPVFALGMLR 56
           MAL  RQRRP  SD  PS+   +      DKP R   +G   E+K LGWF P+FALG+LR
Sbjct: 1   MALAMRQRRPFTSDSLPSTAASSSSYSKSDKPGRSATEG---EDKGLGWFFPLFALGLLR 57

Query: 57  YMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASW 116
           YMSAT+NIIHDCDEVFNYWEPLH+LLYKSGFQTWEYSS+FALRSYLYI+ HELVGRPA+W
Sbjct: 58  YMSATSNIIHDCDEVFNYWEPLHFLLYKSGFQTWEYSSQFALRSYLYIVLHELVGRPAAW 117

Query: 117 LFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTS 176
           LF+EDKVRVF+AVRLFLG LSV T+ VLVVALSRK+G+RLA+YTLAMLCLTSGCFFASTS
Sbjct: 118 LFSEDKVRVFFAVRLFLGFLSVVTETVLVVALSRKFGKRLATYTLAMLCLTSGCFFASTS 177

Query: 177 FLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQA 236
           FLPSSFSMYA+SL+SG FLLEK A AVAV+A+GVILGWPFS+L FLPV  YSL R+FK+A
Sbjct: 178 FLPSSFSMYAVSLSSGLFLLEKPAPAVAVAASGVILGWPFSVLVFLPVTLYSLRRKFKEA 237

Query: 237 FLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYNVVGGGESHLYGIEGPLYYLRNAF 296
           FLAGA TS+ LLA S+ VDY YY+RWTSSVLNL++YNV+GGGESHLYG EGPL+YLRN F
Sbjct: 238 FLAGALTSIALLAFSLLVDYYYYKRWTSSVLNLLIYNVLGGGESHLYGTEGPLFYLRNGF 297

Query: 297 NNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLI 356
           NNFN  FVLALLFVGILPI+RKKY P L+VV+SP+YIWL FMS+QPHKEERFLYP+YPLI
Sbjct: 298 NNFNVCFVLALLFVGILPISRKKYVPDLLVVISPIYIWLAFMSLQPHKEERFLYPVYPLI 357

Query: 357 CVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAP 416
           CVAASAVIE FPD FRD+Y+P  N V+V  AKVLRP VLGLILCASH+RTFSL+NGYAAP
Sbjct: 358 CVAASAVIECFPDFFRDRYNPYDNSVLVMIAKVLRPLVLGLILCASHARTFSLINGYAAP 417

Query: 417 IEVYKILQHHDDAGPGSVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTL 476
           +EVYK+L HH+D    S +CVGSEWHR+PSSFF+P+Y+ EVRW+DDGFRGLLP PFNSTL
Sbjct: 418 LEVYKVLAHHEDIVTDSTICVGSEWHRFPSSFFVPDYIKEVRWIDDGFRGLLPFPFNSTL 477

Query: 477 GGTSAAPSYFNNENKASDQQFV 498
           GGT+AAP YFN++NKASD+Q++
Sbjct: 478 GGTAAAPPYFNDKNKASDEQYL 499

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225461656\|ref\|XP_002285438.1\| PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147839188\|emb\|CAN72375.1\| hypothetical protein VITISV_019598 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449456581\|ref\|XP_004146027.1\| PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356549667\|ref\|XP_003543213.1\| PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max]	Back alignment and taxonomy information

>gi\|356544088\|ref\|XP_003540487.1\| PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max]	Back alignment and taxonomy information

>gi\|255564762\|ref\|XP_002523375.1\| glycosyltransferase, putative [Ricinus communis] gi\|223537325\|gb\|EEF38954.1\| glycosyltransferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|357452219\|ref\|XP_003596386.1\| Alpha-1 2-mannosyltransferase ALG9 [Medicago truncatula] gi\|355485434\|gb\|AES66637.1\| Alpha-1 2-mannosyltransferase ALG9 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|297850092\|ref\|XP_002892927.1\| sugar binding protein [Arabidopsis lyrata subsp. lyrata] gi\|297338769\|gb\|EFH69186.1\| sugar binding protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|145335796|ref|NP_173134.2| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] gi|75173357|sp|Q9FZ49.1|ALG9_ARATH RecName: Full=Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase; AltName: Full=Alpha-1,2-mannosyltransferase ALG9; AltName: Full=Asparagine-linked glycosylation protein 9; AltName: Full=Dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase gi|9802774|gb|AAF99843.1|AC051629_10 Hypothetical protein [Arabidopsis thaliana] gi|22655224|gb|AAM98202.1| Ser/Thr protein kinase, putative [Arabidopsis thaliana] gi|34098911|gb|AAQ56838.1| At1g16900 [Arabidopsis thaliana] gi|332191397|gb|AEE29518.1| alpha-1,2-mannosyltransferase [Arabidopsis thaliana]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		540
TAIR\|locus:2015601		570	EBS3 "AT1G16900" [Arabidopsis	0.911	0.863	0.706	8.7e-198
DICTYBASE\|DDB_G0279349		649	alg9 "dolichyl-phosphate-manno	0.314	0.261	0.357	4.1e-60
MGI\|MGI:1924753		611	Alg9 "asparagine-linked glycos	0.668	0.590	0.366	5.1e-58
UNIPROTKB\|Q9H6U8		611	ALG9 "Alpha-1,2-mannosyltransf	0.668	0.590	0.361	9.6e-57
UNIPROTKB\|E2RIM2		611	ALG9 "Uncharacterized protein"	0.675	0.597	0.352	1.2e-56
UNIPROTKB\|J9PAV7		809	ALG9 "Uncharacterized protein"	0.675	0.451	0.352	1.2e-56
UNIPROTKB\|E1BA58		611	ALG9 "Uncharacterized protein"	0.668	0.590	0.364	3.3e-56
UNIPROTKB\|E1C456		546	ALG9 "Uncharacterized protein"	0.670	0.663	0.369	4.2e-56
RGD\|1311272		613	Alg9 "alpha-1,2-mannosyltransf	0.672	0.592	0.349	2.3e-55
WB\|WBGene00007556		603	C14A4.3 [Caenorhabditis elegan	0.740	0.663	0.327	4.3e-54

TAIR\|locus:2015601 EBS3 "AT1G16900" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1915 (679.2 bits), Expect = 8.7e-198, P = 8.7e-198
 Identities = 351/497 (70%), Positives = 411/497 (82%)

Query:     4 TTRQRR--XXXXXXXXXXXIYTKYDKPSRRLGDGGREEEKSLGWFVPVFALGMLRYMSAT 61
             TTRQRR              Y+K DKP R   +GG  E+  L WF+P  AL  LRYMSAT
Sbjct:     5 TTRQRRPLISDSSSSSSTKSYSKTDKPGR--SNGGDAEDGGLRWFLPFIALCYLRYMSAT 62

Query:    62 TNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAED 121
             +NIIHDCDEVFNYWEPLHY+LYKSGFQTWEYSS FALRSYLYILFHEL GRPASW F +D
Sbjct:    63 SNIIHDCDEVFNYWEPLHYILYKSGFQTWEYSSNFALRSYLYILFHELAGRPASWWFGDD 122

Query:   122 KVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSS 181
             KVRVFYAVRLFLGL+S  +D VLVVALSRKYG+R+A+Y +AMLCLTSGCFFASTSFLPSS
Sbjct:   123 KVRVFYAVRLFLGLVSAVSDTVLVVALSRKYGKRIATYAVAMLCLTSGCFFASTSFLPSS 182

Query:   182 FSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLARRFKQAFLAGA 241
             FSMYAISL+SG  L EKYAMAVAVS  GVILGWPFSILAFLPVV YSL +RFKQAF+AGA
Sbjct:   183 FSMYAISLSSGLLLFEKYAMAVAVSVVGVILGWPFSILAFLPVVIYSLVKRFKQAFIAGA 242

Query:   242 ATSVTLLALSVFVDYQYYRRWTSSXXXXXXXXXXXXXESHLYGIEGPLYYLRNAFNNFNF 301
              T++ LL +S+ VDY YY+RWTSS             ESHLYG EG L+Y+RN FNNFNF
Sbjct:   243 VTTIFLLGVSLLVDYYYYKRWTSSVLNLLIYNVLGGGESHLYGTEGALFYIRNGFNNFNF 302

Query:   302 GFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLICVAAS 361
              F+LA+LFV I P+ R+KY   L+VV+SP+YIWL FMS+QPHKEERFLYPIYPLICV+AS
Sbjct:   303 CFILAMLFVAIYPVIRRKYDRALLVVISPMYIWLAFMSLQPHKEERFLYPIYPLICVSAS 362

Query:   362 AVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYK 421
             AVIE+ P++FR+KY    + ++VT  K +RP +LG ILCASHSRTF+L+NGY+AP+EVYK
Sbjct:   363 AVIENIPELFREKYSSRES-LLVTITKYMRPVILGCILCASHSRTFALINGYSAPLEVYK 421

Query:   422 ILQHHDDAGPGSVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTLGGTSA 481
             +L+HHDDAGPGSV+CVGSEWHRYPSSFF+P+Y+ EVRW+DDGFRGLLP PFN+TLGGTSA
Sbjct:   422 LLEHHDDAGPGSVLCVGSEWHRYPSSFFVPHYISEVRWIDDGFRGLLPFPFNNTLGGTSA 481

Query:   482 APSYFNNENKASDQQFV 498
             +P YFNN+N+AS++Q++
Sbjct:   482 SPPYFNNKNQASEEQYL 498

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=ISS

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0004377 "GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity" evidence=NAS

GO:0006490 "oligosaccharide-lipid intermediate biosynthetic process" evidence=NAS

GO:0000026 "alpha-1,2-mannosyltransferase activity" evidence=IGI

GO:0030433 "ER-associated protein catabolic process" evidence=IGI

GO:0005783 "endoplasmic reticulum" evidence=IDA

DICTYBASE\|DDB_G0279349 alg9 "dolichyl-phosphate-mannose alpha-1,2-mannosyltransferase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

MGI\|MGI:1924753 Alg9 "asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9H6U8 ALG9 "Alpha-1,2-mannosyltransferase ALG9" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RIM2 ALG9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|J9PAV7 ALG9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BA58 ALG9 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|E1C456 ALG9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

RGD\|1311272 Alg9 "alpha-1,2-mannosyltransferase" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

WB\|WBGene00007556 C14A4.3 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FZ49	ALG9_ARATH	2, ., 4, ., 1, ., 2, 6, 1	0.7344	0.9111	0.8631	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		540
pfam03901		412	pfam03901, Glyco_transf_22, Alg9-like mannosyltran	1e-101
PLN02816		546	PLN02816, PLN02816, mannosyltransferase	9e-04
PRK11021		410	PRK11021, PRK11021, putative transporter; Provisio	0.002

>gnl\|CDD\|217785 pfam03901, Glyco_transf_22, Alg9-like mannosyltransferase family	Back alignment and domain information

 Score =  311 bits (799), Expect = e-101
 Identities = 150/424 (35%), Positives = 214/424 (50%), Gaps = 47/424 (11%)

Query: 55  LRYMSATTNIIH-DCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRP 113
           LR + A       D DEVF  WE LHYL++  GF TWE+S ++ +RSY Y L   L  + 
Sbjct: 9   LRLILALLVQTSYDPDEVFQSWEVLHYLVFGYGFLTWEWSPKYGIRSYFYPLLFALPYKL 68

Query: 114 ASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFA 173
            + LF + K  VFYA RL LGL S   D  L  A+ R YG+ +A + L +   + G F+A
Sbjct: 69  LARLFLDSKYLVFYAPRLLLGLFSALADYYLYRAVCRLYGKEIARWALLLSLSSWGMFYA 128

Query: 174 STSFLPSSFSMYAISLASGFFLLE----------KYAMAVAVSAAGVILGWPFSILAFLP 223
           ST  LP+SF M   S+A  + L            KY  AV + AA  ILG P S L +LP
Sbjct: 129 STRTLPNSFEMILTSIALYYLLEYGSVPNTSVSYKYLKAVLLIAALAILGRPTSALLWLP 188

Query: 224 VVFYSLAR---RFKQAFLAGAATSVTLLAL-----SVFVDYQYYRRWTSSVLNLVVYNVV 275
           +V Y L R   +  + FL  A +   L+ L      + +D  +Y R+  + LN + YNV+
Sbjct: 189 LVLYHLLRLPGKRLKLFLFLAISLGLLVLLLVLGAVILIDSYFYGRFVFTPLNFLKYNVL 248

Query: 276 GGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIWL 335
             G S LYG     +Y  N   N    F+LA +   ++ ++R      L+++++P+ IWL
Sbjct: 249 SNG-SSLYGTHPWYWYFSNGLPNILGPFLLAFILGPLVLVSR------LLLLLAPILIWL 301

Query: 336 LFMSMQPHKEERFLYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVL 395
              S+QPHKEERFLYPIYPLIC++A+  ++     ++               K L    L
Sbjct: 302 FVYSLQPHKEERFLYPIYPLICLSAAIALDRLSRKWKVS-------------KKLSLLFL 348

Query: 396 GLILCASHSRTFSLVNGYAAPIEVYKILQHH--------DDAGPGSVVCVGSEWHRYPSS 447
            L    S +  F LV+ Y AP+ VY ++           +  GP   VC+G   +  PSS
Sbjct: 349 LLFFNVSLALFFGLVHQYGAPLAVYDVMSFLNETPRENRNGHGPPVNVCIGMPCYSTPSS 408

Query: 448 FFIP 451
           FF+ 
Sbjct: 409 FFLH 412

Members of this family are mannosyltransferase enzymes. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis. Length = 412

>gnl\|CDD\|215437 PLN02816, PLN02816, mannosyltransferase	Back alignment and domain information

>gnl\|CDD\|236823 PRK11021, PRK11021, putative transporter; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		540
KOG2515		568	consensus Mannosyltransferase [Cell wall/membrane/	100.0
PLN02816		546	mannosyltransferase	100.0
PF03901		418	Glyco_transf_22: Alg9-like mannosyltransferase fam	100.0
KOG1771		464	consensus GPI-alpha-mannosyltransferase III (GPI10	100.0
KOG2516		517	consensus Protein involved in dolichol pathway for	100.0
KOG4123		550	consensus Putative alpha 1,2 mannosyltransferase [	100.0
TIGR03663		439	conserved hypothetical protein TIGR03663. Members	99.19
PRK13279		552	arnT 4-amino-4-deoxy-L-arabinose transferase; Prov	99.11
COG1807		535	ArnT 4-amino-4-deoxy-L-arabinose transferase and r	97.97
PF09852		449	DUF2079: Predicted membrane protein (DUF2079); Int	97.55
PF13231		159	PMT_2: Dolichyl-phosphate-mannose-protein mannosyl	97.39
TIGR03766		483	conserved hypothetical integral membrane protein.	97.34
PF09913		389	DUF2142: Predicted membrane protein (DUF2142); Int	96.99
PF04188		443	Mannosyl_trans2: Mannosyltransferase (PIG-V)); Int	96.26
COG5542		420	Predicted integral membrane protein [Function unkn	95.85
PF04922		379	DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006	91.96
COG1287		773	Uncharacterized membrane protein, required for N-l	90.82
PLN02841		440	GPI mannosyltransferase	89.41
PF09594		241	DUF2029: Protein of unknown function (DUF2029); In	89.29
PF02366		245	PMT: Dolichyl-phosphate-mannose-protein mannosyltr	88.3
PF09586		843	YfhO: Bacterial membrane protein YfhO; InterPro: I	84.05
PF10131		616	PTPS_related: 6-pyruvoyl-tetrahydropterin synthase	82.86

>KOG2515 consensus Mannosyltransferase [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

Probab=100.00  E-value=1.3e-128  Score=998.96  Aligned_cols=475  Identities=45%  Similarity=0.756  Sum_probs=422.0

Q ss_pred             CcccccCChHHHHHHHHHHHHHHhhhcCCCCCccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHHHHHHHH
Q 009200           37 REEEKSLGWFVPVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASW  116 (540)
Q Consensus        37 ~~~~~~~~~~~~~~~ll~~Rl~~al~~~i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~  116 (540)
                      +++....++.++|++++..|+.+|.++.|+||||+||||||+|++++|+|+|||||||+|+||||+|+++|++++++..+
T Consensus         6 ~gn~~~~s~~~~Fk~lls~Rl~sA~~~iI~DCDEvfNYWEPLHyllyG~GfQTWEYSP~yaiRSy~Yillh~~pg~~~a~   85 (568)
T KOG2515|consen    6 PGNCWAVSFSTAFKLLLSLRLCSATFSIISDCDEVFNYWEPLHYLLYGEGFQTWEYSPEYAIRSYAYILLHYVPGYFVAK   85 (568)
T ss_pred             CCCccceeeHHHHHHHHHHHHHHHHHHhhhcchhhhhcchhhhhHhhcccccceeeCchhHHHHHHHHHHHHcchHHHHH
Confidence            34566688999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhh
Q 009200          117 LFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLL  196 (540)
Q Consensus       117 ~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~  196 (540)
                      ++|++|.++||++|+.+|++|+++|.+++++++|.+|.++|+.+++++++|.|||++||++|||||+|+++.+|++.|+.
T Consensus        86 ~fg~~ki~vFy~vR~~Lg~fsai~E~~l~~ai~~kf~~~ia~~~i~f~~fssGmF~aStafLPSSF~M~~~~~al~a~l~  165 (568)
T KOG2515|consen   86 LFGLSKILVFYFVRLCLGFFSAIMETYLYKAICRKFGLAIARIWIIFLLFSSGMFHASTAFLPSSFAMYLTVLALGAWLT  165 (568)
T ss_pred             hcCCCceEeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceeeechhcchHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcccchhhhhhhhh
Q 009200          197 EKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLAR--RFKQ-AFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYN  273 (540)
Q Consensus       197 ~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~--~~~~-~l~~~i~~~l~~l~~~v~iDs~fYg~~~~~~lN~l~yN  273 (540)
                      +|+..+++..++|+++||||++++++|+++.++..  +++. ++.+...+++..++.++++||+||||++++|||++.||
T Consensus       166 ~n~~~av~~~a~gailGWPFsa~l~lPi~~~lll~k~r~k~~F~~~~l~~~~~~~v~~i~~Ds~yygkl~~a~lNIv~YN  245 (568)
T KOG2515|consen  166 ENYTKAVAYVAIGAILGWPFSALLGLPILLELLLLKHRFKSTFITWFLCILILLLVPVIVTDSYYYGKLTFAPLNIVLYN  245 (568)
T ss_pred             hhhHHHHHHHHHHHHhccHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHhccceEEEeehhhccceeeeeeeEEEe
Confidence            99999999999999999999999999988777653  6776 45556666666667789999999999999999999999


Q ss_pred             hcCCCCCccccccchhHHHHHhhhhhhHHHHHHHHHHHHHHh----hhhccCc-chhHHHHHHHHHHHHHhcCCCcccch
Q 009200          274 VVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPI----ARKKYAP-GLVVVVSPVYIWLLFMSMQPHKEERF  348 (540)
Q Consensus       274 v~~~~gs~~yGt~Pw~~Y~~~~l~n~~i~~~lall~~~~~~~----~~~~~~~-~~~~~l~~~~~wl~i~S~~pHKE~RF  348 (540)
                      |++++||++||||||+||+.|+++|||+++.+|++..+...+    .+.+.+. ..-.++.|+++|+++++.||||||||
T Consensus       246 V~~~~gP~iyGtEP~~yYi~NlflNfNi~~~lA~~~~p~~li~~l~~w~~~dsl~~p~~isp~yiWl~iF~~QPHKEERF  325 (568)
T KOG2515|consen  246 VLTGHGPNIYGTEPWYYYIINLFLNFNIVFLLAMLLGPFLLIYFLRVWPKWDSLALPVVISPMYIWLAIFFIQPHKEERF  325 (568)
T ss_pred             eccCCCCCccccCchHHHHHhhhccccHHHHHHHHhchHHHHHHHhhhhhhhccCCceehhHHHHHHHHHhcCccchhhh
Confidence            999999999999999999999999999998887763322111    1222222 11224569999999999999999999


Q ss_pred             hhchhhHHHHHHHHHhhhcccccccCCCCCcchhHhhhhhhhhHHHHHHHHHHHHHHHHHHHhccccchhhHHhccccCC
Q 009200          349 LYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDD  428 (540)
Q Consensus       349 L~Pi~Pll~l~aAi~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ls~~r~~~l~~~Y~apl~v~~~L~~~~~  428 (540)
                      |||+||++|++||++++..++++.++.+... +......+.+++.+++.++++|+||++|+++||+||++||++++++++
T Consensus       326 LyPIYPlI~l~aaiald~~~~lf~~k~s~~~-~~~~~~~~~i~l~v~~~~~~ls~SR~~Al~nnY~aPl~vY~~l~~~~t  404 (568)
T KOG2515|consen  326 LYPIYPLICLSAAIALDAVLRLFLRKLSSRE-SHYVTLSKFIALLVLLIIACLSMSRIVALVNNYHAPLEVYPELSSLNT  404 (568)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHhhc
Confidence            9999999999999999999987765433211 122223456677888899999999999999999999999999988754


Q ss_pred             CC---CCccceecccceecCCCcccC-CCCceeEeecCCCCCCCCcCCCCC---CCCCcCCCCCcccccccCCCccCCCC
Q 009200          429 AG---PGSVVCVGSEWHRYPSSFFIP-NYVGEVRWLDDGFRGLLPLPFNST---LGGTSAAPSYFNNENKASDQQFVILP  501 (540)
Q Consensus       429 ~~---~~~~vC~g~ewyrfPssffLp-~~~~~l~Fl~s~f~G~LP~~f~~~---~~~t~~~p~~~Nd~N~ee~~~yv~~~  501 (540)
                      .+   +++|||+||||||||||||+| +| .||||+||||||+||++|+|+   .++|+.+|++|||+|+||++||+|++
T Consensus       405 ~~~~~~~~nVCvGkEWhRfPSSFflP~dn-~rlrFikSeFrGlLP~pF~es~s~~~~tr~iP~~mNn~Nqee~~rY~di~  483 (568)
T KOG2515|consen  405 DGTKAPPVNVCVGKEWHRFPSSFFLPHDN-SRLRFIKSEFRGLLPGPFPESGSIFEGTRTIPPYMNNKNQEEESRYWDIE  483 (568)
T ss_pred             CCCCCCceeeeeCcccccCCccccccccc-ceEEeeccccCccCCCCcccccccccceeeCCcccccccccCcceeeccc
Confidence            33   346999999999999999999 55 999999999999999999999   68999999999999999999999999


Q ss_pred             CCcEEEeccCCc
Q 009200          502 LPAGLIEIYTAL  513 (540)
Q Consensus       502 ~Cdy~vd~~~~~  513 (540)
                      +|||+||++.+.
T Consensus       484 ~CdyliD~~~~~  495 (568)
T KOG2515|consen  484 RCDYLIDIVLDI  495 (568)
T ss_pred             cccEEEEecccc
Confidence            999999965543

>PLN02816 mannosyltransferase	Back alignment and domain information

>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2	Back alignment and domain information

>KOG1771 consensus GPI-alpha-mannosyltransferase III (GPI10/PIG-B) involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG2516 consensus Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family) [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4123 consensus Putative alpha 1,2 mannosyltransferase [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR03663 conserved hypothetical protein TIGR03663	Back alignment and domain information

>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional	Back alignment and domain information

>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64	Back alignment and domain information

>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase	Back alignment and domain information

>TIGR03766 conserved hypothetical integral membrane protein	Back alignment and domain information

>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function	Back alignment and domain information

>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface	Back alignment and domain information

>COG5542 Predicted integral membrane protein [Function unknown]	Back alignment and domain information

>PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family	Back alignment and domain information

>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]	Back alignment and domain information

>PLN02841 GPI mannosyltransferase	Back alignment and domain information

>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes	Back alignment and domain information

>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []	Back alignment and domain information

>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		540
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 42.1 bits (98), Expect = 4e-04
 Identities = 49/350 (14%), Positives = 98/350 (28%), Gaps = 110/350 (31%)

Query: 251 SVFVDYQYYRRWTSSVL-----------NLVVYNVVGGGESHL-------YGIEGPLYYL 292
            VF  Y   R      L           N+++  V+G G++ +       Y ++      
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ-----C 178

Query: 293 RNAFNNF--NFGFV---------LALLFVGILP--IARKKYAPGLVVVVSPVYIWLL-FM 338
           +  F  F  N             L  L   I P   +R  ++  + + +  +   L   +
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 339 SMQPHKEERFLYPIYPLIC--VAASAVIESFPDI-------FRDKYDPNANFVMVTTAKV 389
             +P++    L     L+   V  +    +F ++        R K     +F+   T   
Sbjct: 239 KSKPYE--NCL-----LVLLNVQNAKAWNAF-NLSCKILLTTRFK--QVTDFLSAATTTH 288

Query: 390 LR------PF----VLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDDAGPGSVVCVGS 439
           +             V  L+L     R   L      P EV           P  +  +  
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDL------PREVLTT-------NPRRLSIIAE 335

Query: 440 EWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNSTLGGTSAA--PSYFNNENKASDQQF 497
                 +            W  D ++ +      + +  +     P     E +    + 
Sbjct: 336 SIRDGLA-----------TW--DNWKHVNCDKLTTIIESSLNVLEP----AEYRKMFDRL 378

Query: 498 VILP----LPAGLIEIY--------TALCLCILHPLFLFFCEVTKLTFYI 535
            + P    +P  L+ +           + +  LH   L   +  + T  I
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI 428

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		540
3rce_A		724	Oligosaccharide transferase to N-glycosylate PROT;	95.19

>3rce_A Oligosaccharide transferase to N-glycosylate PROT; oligosaccharyltransferase, membrane protein, helical bundle, glycosylation, acceptor peptide, plasma membrane; HET: PPN; 3.40A {Campylobacter lari}	Back alignment and structure

Probab=95.19  E-value=3.7  Score=46.33  Aligned_cols=81  Identities=4%  Similarity=-0.080  Sum_probs=54.1

Q ss_pred             HHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccc--cCcchHHHHHHHHH
Q 009200          113 PASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTS--FLPSSFSMYAISLA  190 (540)
Q Consensus       113 ~~~~~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~str--tlpnSf~m~~~~~a  190 (540)
                      .+.+++|.+   .-.+.+.+-+++++++-..+|-.+++..|.+.|....++.+.+++...=+..  .=.+.++..+.+++
T Consensus        90 ~l~~i~g~s---l~~v~~~lp~ifg~L~vi~~yll~~el~~~~aGl~AAll~ai~P~~i~RS~aG~~D~e~l~i~~~ll~  166 (724)
T 3rce_A           90 WLYSILPFS---FESIILYMSTFFASLIVVPIILIAREYKLTTYGFIAALLGSIANSYYNRTMSGYYDTDMLVLVLPMLI  166 (724)
T ss_dssp             HHHHSCSSC---HHHHHHHHHHHHGGGGHHHHHHHHHHTTCHHHHHHHHHHHTTSHHHHHTSSTTCCSGGGGTTHHHHHH
T ss_pred             HHHHHcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Confidence            344456655   3456777778888888888888888888888888888888899974332222  33455565555555


Q ss_pred             HHHHhh
Q 009200          191 SGFFLL  196 (540)
Q Consensus       191 l~~~l~  196 (540)
                      ++.+.+
T Consensus       167 ~~~~i~  172 (724)
T 3rce_A          167 LLTFIR  172 (724)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555543

PyMOL of 3rce

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00