Citrus Sinensis ID: 009217

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540
MVLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIKNL
cccccccccccccHHHHHHccccccccHHHHcccccccHHHHHHHHHccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHccccEEEEEEccccccHHHccccEEEEEEEEEEcccEEEEEEEEEEEEcccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccHHHHccccccccccccccccccccccHHHHHHHHHcccccccccHHHHHHHccccccccHHHHHHccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccEEEEEEccccccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHcccEEEEccccccccHHHHHHcccccccEEEcccccccccccccccccccEEcccccccHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcc
ccHHccccHHHHHHHHHHHHHHHHHHHHHEHHHHcccccccccccccccccccccccEEEEEEEccccHcccccHHHHHHccHHHHHHccccEEEEEcccccccHHHHHcccccEEEEEEEEcccEEEEEEEEEEEcccEEEEEcccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHHHHccccccEEEEEEEEHHHcccccHHHHHHHcccccHHccccccccccccccHHHHHHHHEEccEEEEEcccHHHHHcccccccccHHHHHHccccEEEEEEccccccccccccccEcEccccccHcHHHHHHHHHHHHHcccccccccEEEEEEEccccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHEEEcccccccccHHHHHHHHcccccEEEcccccccccEccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcc
mvltgminsgeasNLRKLVFDYKVSVADLFADILPEGDADLLAELRRfgsgskkngfHIIHICTemdplvsigSLASYVTGlsgalqrkghlveVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIgvtfiqplhyssffnresvygysddferftyfSRASLDYIVksrkqpdvlhihNWETAIVGPLFWDIFVKQGLEGTRILLSCHNlnslclehpdklalcgldparlhrpdrlqdntkTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDkllvapcgfdsstwdpsndkfltenycaedmkgktVCKVTLQQqlglskdastIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVftgtnklpsaSRALVSFQEELKDGIVIFVDSYDDALLHLIFSgsdiilchsfhdpllqvplkalkygaapiavtssdiefrhfaefdhestrFSRFIsstfgnisLSQALEEIknnplswkRKIKDAMLQdfswdadcndiHISAYTAIKNL
mvltgminsgeasnLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLhrpdrlqdntkTHLVnilkggvvySNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIKNL
MVLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRIllschnlnslclEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHEstrfsrfisstfGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIKNL
*************NLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAI***
**************LR*LVFDYKVSVA*******************************IIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIKNL
MVLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIKNL
*VLTGMINSGEASNLRKLVFDYKVSVADLFADILPE**********RFGSGSKKNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIKNL
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MVLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIKNL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query540 2.2.26 [Sep-21-2011]
Q0WVX51040 Probable starch synthase no no 0.961 0.499 0.361 5e-98
Q6MAS9500 Glycogen synthase OS=Prot yes no 0.879 0.95 0.324 1e-71
Q604D9487 Glycogen synthase 2 OS=Me yes no 0.877 0.973 0.292 9e-60
P72623491 Probable glycogen synthas N/A no 0.883 0.971 0.296 2e-58
Q2JSZ9491 Glycogen synthase 1 OS=Sy yes no 0.738 0.812 0.317 1e-57
Q3JEW3487 Glycogen synthase 1 OS=Ni yes no 0.855 0.948 0.286 6e-56
Q2JNM6491 Glycogen synthase 1 OS=Sy yes no 0.738 0.812 0.305 5e-53
Q3M9U1492 Glycogen synthase 1 OS=An yes no 0.729 0.800 0.313 1e-52
Q8Z0Q9492 Probable glycogen synthas yes no 0.872 0.957 0.287 5e-52
Q438461230 Soluble starch synthase 3 N/A no 0.822 0.360 0.285 1e-47
>sp|Q0WVX5|SSY4_ARATH Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS4 PE=2 SV=1 Back     alignment and function desciption
 Score =  358 bits (920), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 192/531 (36%), Positives = 296/531 (55%), Gaps = 12/531 (2%)

Query: 2    VLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHIIH 61
            +L   I S +A  LR +V+     + D + D+  + + D ++   +  S    +G +++H
Sbjct: 487  LLEKKIASNDADLLRDMVWKKDRRIHDTYIDVKDKNERDAISAFLKLVSSPTSSGLYVVH 546

Query: 62   ICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSY 121
            I  EM P+  +G L   V GL  ALQRKGHLVE+ILPKY CM  D V+ LR +     SY
Sbjct: 547  IAAEMAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALDTVVESY 606

Query: 122  FNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVK 181
            F+G+L+ NKIWIG V G+ V FI+P H S FF R   YG  DDF RF+YFSRA+L+ +++
Sbjct: 607  FDGKLYKNKIWIGTVEGLPVHFIEPQHPSKFFWRGQFYGEQDDFRRFSYFSRAALELLLQ 666

Query: 182  SRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLD 241
            S K+PD++H H+W+TA V PL+WD++  +GL+  RI  +CHN          +L  CGLD
Sbjct: 667  SGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLDSARICFTCHNFEYQGTASASELGSCGLD 726

Query: 242  PARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQ 301
              +L+RPDR+QD++    VN +KG +++SN V  VS  +++         GL STL  H 
Sbjct: 727  VNQLNRPDRMQDHSSGDRVNPVKGAIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHS 786

Query: 302  DKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSK-DASTIVVGC 360
             K +    G D+ +W+P+ D FL   + A+D++GK   K  L++QLGLS  ++   +VGC
Sbjct: 787  KKFIGILNGIDTDSWNPATDPFLKAQFNAKDLQGKEENKHALRKQLGLSSAESRRPLVGC 846

Query: 361  IFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELK--DGIVIFVD 418
            I   V    +  ++  +      G QFV  G++ +P   R     +++ K  D + + + 
Sbjct: 847  ITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPHIQREFEGIEQQFKSHDHVRLLL- 905

Query: 419  SYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHES 478
             YD+AL H I++ SD+ +  S  +P     + A++YG+ PIA  +  +    F + D ++
Sbjct: 906  KYDEALSHTIYAASDLFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVF-DIDDDT 964

Query: 479  --TRFSR-FISSTFG----NISLSQALEEIKNNPLSWKRKIKDAMLQDFSW 522
              T+F   F   T      N +L +A    K +   W R ++  M  DFSW
Sbjct: 965  IPTQFQNGFTFQTADEQGFNYALERAFNHYKKDEEKWMRLVEKVMSIDFSW 1015
Probably involved in the priming of starch granule formation. May play a regulatory role in the control of starch accumulation in plastids. Is necessary and sufficient to establish the correct number of starch granules observed in chloroplasts.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 1
>sp|Q6MAS9|GLGA_PARUW Glycogen synthase OS=Protochlamydia amoebophila (strain UWE25) GN=glgA PE=3 SV=1 Back     alignment and function description
>sp|Q604D9|GLGA2_METCA Glycogen synthase 2 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) GN=glgA2 PE=3 SV=2 Back     alignment and function description
>sp|P72623|GLGA2_SYNY3 Probable glycogen synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=glgA2 PE=1 SV=1 Back     alignment and function description
>sp|Q2JSZ9|GLGA1_SYNJA Glycogen synthase 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA1 PE=3 SV=1 Back     alignment and function description
>sp|Q3JEW3|GLGA1_NITOC Glycogen synthase 1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA1 PE=3 SV=1 Back     alignment and function description
>sp|Q2JNM6|GLGA1_SYNJB Glycogen synthase 1 OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=glgA1 PE=3 SV=1 Back     alignment and function description
>sp|Q3M9U1|GLGA1_ANAVT Glycogen synthase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgA1 PE=3 SV=1 Back     alignment and function description
>sp|Q8Z0Q9|GLGA2_NOSS1 Probable glycogen synthase 2 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=glgA2 PE=3 SV=1 Back     alignment and function description
>sp|Q43846|SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query540
224094985 669 predicted protein [Populus trichocarpa] 0.996 0.804 0.718 0.0
187611219 682 starch synthase V precursor [Vitis vinif 1.0 0.791 0.705 0.0
449522696555 PREDICTED: probable starch synthase 4, c 1.0 0.972 0.667 0.0
449451575 673 PREDICTED: probable starch synthase 4, c 1.0 0.802 0.667 0.0
187611217 677 starch synthase V precursor [Solanum tub 0.998 0.796 0.644 0.0
356497665630 PREDICTED: glycogen synthase-like [Glyci 1.0 0.857 0.631 0.0
187611215 687 starch synthase V precursor [Lotus japon 0.998 0.784 0.620 0.0
255576023 720 starch synthase, putative [Ricinus commu 0.825 0.619 0.693 0.0
388492252 652 unknown [Medicago truncatula] 0.927 0.768 0.633 0.0
185863629 700 starch synthase V precursor [Oryza sativ 0.990 0.764 0.529 1e-164
>gi|224094985|ref|XP_002310316.1| predicted protein [Populus trichocarpa] gi|222853219|gb|EEE90766.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/540 (71%), Positives = 461/540 (85%), Gaps = 2/540 (0%)

Query: 1   MVLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHII 60
           MVLTG+I+S EAS +RK V   K SVA +F DI  + DA+LLA+LR F  GS+KNGFHII
Sbjct: 132 MVLTGLIDSAEASGMRKAVMGNKFSVALVFFDIRQKTDAELLAQLRHFSVGSRKNGFHII 191

Query: 61  HICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYS 120
            ICTEM+PLVS+GSL+SYVTGLS ALQ+KGH+VEVILPKYAC++L  +QGLREI+AE YS
Sbjct: 192 QICTEMEPLVSVGSLSSYVTGLSKALQKKGHIVEVILPKYACLDLTEMQGLREIEAELYS 251

Query: 121 YFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIV 180
           YFNGQLH N+IW G+V GIGVT IQPL+YSSFF+RE VYGYSDDFERFTYFSRASLDYI 
Sbjct: 252 YFNGQLHGNRIWTGIVHGIGVTLIQPLYYSSFFDRERVYGYSDDFERFTYFSRASLDYIA 311

Query: 181 KSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGL 240
           KS KQPDVLHIHNWETAIVGPLFWDIFVKQGL GTR+LL+CH  +S CLE PDKLALCGL
Sbjct: 312 KSGKQPDVLHIHNWETAIVGPLFWDIFVKQGLGGTRVLLTCHGFDSQCLEQPDKLALCGL 371

Query: 241 DPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIH 300
           DPARLHRPDRLQD+T THLVNILKGG+VYSNKVV+V S++SK RII S SHGLE TLAIH
Sbjct: 372 DPARLHRPDRLQDHTMTHLVNILKGGLVYSNKVVMVQSIYSKERIINSFSHGLEPTLAIH 431

Query: 301 QDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGC 360
           +DKLLV+PCGFD+STWDPS DKFL +NY A+D+KGK++CKV LQQQLGLSK++ST++VGC
Sbjct: 432 KDKLLVSPCGFDNSTWDPSKDKFLPKNYSADDLKGKSICKVALQQQLGLSKNSSTVLVGC 491

Query: 361 IFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSY 420
           I ++  D  L N KA V  A  + +QF+F G+ K  SA  AL   ++ELKD  V F++ Y
Sbjct: 492 ISTESLDFDLNNQKA-VWNATPKSVQFIFMGS-KATSADGALEYLKKELKDETVRFINKY 549

Query: 421 DDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTR 480
           D+ALLHLIF+GSDIILC SFHDPLLQVPLKALKYGAAP+AVTS++ +FRHF + + E+TR
Sbjct: 550 DEALLHLIFAGSDIILCQSFHDPLLQVPLKALKYGAAPVAVTSNENKFRHFVDREQETTR 609

Query: 481 FSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIKNL 540
           FSRFISSTFG +SLSQA++EIKN+P  WK+K+ DAM +DFSW+A+C D+H+SAYTA+K+L
Sbjct: 610 FSRFISSTFGYLSLSQAVDEIKNSPSKWKQKMVDAMAKDFSWNAECCDVHVSAYTALKSL 669

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|187611219|gb|ACD13789.1| starch synthase V precursor [Vitis vinifera] Back     alignment and taxonomy information
>gi|449522696|ref|XP_004168362.1| PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|449451575|ref|XP_004143537.1| PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|187611217|gb|ACD13788.1| starch synthase V precursor [Solanum tuberosum] Back     alignment and taxonomy information
>gi|356497665|ref|XP_003517680.1| PREDICTED: glycogen synthase-like [Glycine max] Back     alignment and taxonomy information
>gi|187611215|gb|ACD13787.1| starch synthase V precursor [Lotus japonicus] Back     alignment and taxonomy information
>gi|255576023|ref|XP_002528907.1| starch synthase, putative [Ricinus communis] gi|223531661|gb|EEF33487.1| starch synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|388492252|gb|AFK34192.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|185863629|gb|ACC78131.1| starch synthase V precursor [Oryza sativa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query540
TAIR|locus:505006717460 AT5G65685 [Arabidopsis thalian 0.566 0.665 0.656 3.4e-113
TAIR|locus:21419361040 SS4 "starch synthase 4" [Arabi 0.981 0.509 0.348 3.7e-87
TIGR_CMR|GSU_3257484 GSU_3257 "glycogen synthase" [ 0.833 0.929 0.254 2.2e-34
TIGR_CMR|BA_5120476 BA_5120 "glycogen synthase" [B 0.837 0.949 0.251 4.1e-33
TIGR_CMR|GSU_1023501 GSU_1023 "glycogen synthase" [ 0.740 0.798 0.231 7.1e-23
UNIPROTKB|P0A6U8477 glgA [Escherichia coli K-12 (t 0.824 0.932 0.217 7.9e-19
UNIPROTKB|Q9KRB6484 glgA "Glycogen synthase" [Vibr 0.490 0.547 0.231 7.6e-18
TIGR_CMR|VC_1726484 VC_1726 "glycogen synthase" [V 0.490 0.547 0.231 7.6e-18
TAIR|locus:2102102792 SS2 "starch synthase 2" [Arabi 0.842 0.574 0.232 2.5e-15
UNIPROTKB|Q42968609 WAXY "Granule-bound starch syn 0.372 0.330 0.266 3.4e-15
TAIR|locus:505006717 AT5G65685 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1068 (381.0 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
 Identities = 206/314 (65%), Positives = 250/314 (79%)

Query:     1 MVLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHII 60
             MV+ G++N  EAS++RKLV +++ +++    D+L +GDA++LAELRRF +  K+NG H+I
Sbjct:   135 MVINGLVNIEEASSMRKLVKEHEANISVFPLDVLQQGDAEILAELRRFTNKGKRNGLHVI 194

Query:    61 HICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYS 120
             HICTEM PLVS+G LASY+TGLS ALQ +G++VEVILPKY+ ++LD ++GLREI+A+ YS
Sbjct:   195 HICTEMAPLVSVGPLASYITGLSCALQEEGYMVEVILPKYSTLDLDEIEGLREIEADAYS 254

Query:   121 YFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIV 180
             YF+GQLHAN+IW GVVSGIGVT IQP++YSS F+R+ VYGY DDF+RF YFSRASLDYI 
Sbjct:   255 YFDGQLHANRIWNGVVSGIGVTLIQPVYYSSMFSRDKVYGYQDDFDRFAYFSRASLDYIA 314

Query:   181 KSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRIXXXXXXXXXXXXEHPDKLALCGL 240
             KS KQPDVLHIHNW+TAIVGPLFWD+FV QGLEGTRI              P+KL LCGL
Sbjct:   315 KSGKQPDVLHIHNWQTAIVGPLFWDVFVNQGLEGTRILLTCQDFDKGLVP-PEKLELCGL 373

Query:   241 DPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIH 300
             DPA LHR DRLQDNT  H VNILKGGVVYSNKVVI+SS HS      S+  GLE TLAIH
Sbjct:   374 DPAELHRLDRLQDNTNPHFVNILKGGVVYSNKVVIMSSSHS------SIP-GLEPTLAIH 426

Query:   301 QDKLLVAPCGFDSS 314
             +DKL  AP G D+S
Sbjct:   427 KDKLFFAPFGMDNS 440
GO:0009507 "chloroplast" evidence=ISM
GO:0009011 "starch synthase activity" evidence=TAS
TAIR|locus:2141936 SS4 "starch synthase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|P0A6U8 glgA [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TAIR|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q42968 WAXY "Granule-bound starch synthase 1, chloroplastic/amyloplastic" [Oryza glaberrima (taxid:4538)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6MAS9GLGA_PARUW2, ., 4, ., 1, ., 2, 10.3240.87960.95yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.4.1.21LOW CONFIDENCE prediction!
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query540
PLN02939977 PLN02939, PLN02939, transferase, transferring glyc 1e-122
TIGR02095473 TIGR02095, glgA, glycogen/starch synthase, ADP-glu 3e-85
cd03791476 cd03791, GT1_Glycogen_synthase_DULL1_like, This fa 2e-77
PRK00654466 PRK00654, glgA, glycogen synthase; Provisional 3e-74
PLN023161036 PLN02316, PLN02316, synthase/transferase 3e-57
COG0297487 COG0297, GlgA, Glycogen synthase [Carbohydrate tra 1e-53
pfam08323234 pfam08323, Glyco_transf_5, Starch synthase catalyt 3e-38
PRK14098489 PRK14098, PRK14098, glycogen synthase; Provisional 3e-25
PRK14099485 PRK14099, PRK14099, glycogen synthase; Provisional 2e-21
cd03801374 cd03801, GT1_YqgM_like, This family is most closel 7e-05
>gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups Back     alignment and domain information 
 Score =  381 bits (979), Expect = e-122
 Identities = 194/529 (36%), Positives = 295/529 (55%), Gaps = 16/529 (3%)

Query: 7   INSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHIIHICTEM 66
           I++ +A  LR++V+     + + +     + + + +    +       +G HI+HI  EM
Sbjct: 432 ISNNDAKLLREMVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEM 491

Query: 67  DPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQL 126
            P+  +G LA  V+GL  ALQ+KGHLVE++LPKY CM  D ++ L+ +     SYF+G L
Sbjct: 492 APVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNL 551

Query: 127 HANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVKSRKQP 186
             NKIW G V G+ V FI+P H S FF R   YG  DDF+RF+YFSRA+L+ + +S K+P
Sbjct: 552 FKNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKP 611

Query: 187 DVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLH 246
           D++H H+W+TA V PL+WD++  +G    RI  +CHN           LA CGLD  +L 
Sbjct: 612 DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLD 671

Query: 247 RPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSL-SHGLESTLAIHQDKLL 305
           RPDR+QDN     +N++KG +VYSN V  VS  +++   +RS    GL+ TL  H  K +
Sbjct: 672 RPDRMQDNAHGR-INVVKGAIVYSNIVTTVSPTYAQE--VRSEGGRGLQDTLKFHSKKFV 728

Query: 306 VAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLS-KDASTIVVGCIFSD 364
               G D+ TW+PS D+FL   Y A D++GK   K  L++QLGLS  DAS  +VGCI   
Sbjct: 729 GILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRL 788

Query: 365 VSDVFLENLK-AVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELK-DGIVIFVDSYDD 422
           V    +  ++ A+ + A++ G QFV  G++ +P   R      ++ + +  +  +  YD+
Sbjct: 789 VPQKGVHLIRHAIYKTAELGG-QFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDE 847

Query: 423 ALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRFS 482
           AL H I++ SD+ +  S  +P     + A++YG+ PI   +  +    F +FD E+    
Sbjct: 848 ALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVF-DFDDETIPVE 906

Query: 483 RFISSTFG-------NISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDA 524
                TF        N +L +A    K  P  WK+ ++  M  DFSWD+
Sbjct: 907 LRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDS 955

Length = 977
>gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type Back     alignment and domain information
>gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional Back     alignment and domain information
>gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase Back     alignment and domain information
>gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain Back     alignment and domain information
>gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional Back     alignment and domain information
>gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional Back     alignment and domain information
>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 540
PLN02939977 transferase, transferring glycosyl groups 100.0
PRK14099485 glycogen synthase; Provisional 100.0
PRK14098489 glycogen synthase; Provisional 100.0
PLN023161036 synthase/transferase 100.0
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 100.0
PRK00654466 glgA glycogen synthase; Provisional 100.0
COG0297487 GlgA Glycogen synthase [Carbohydrate transport and 100.0
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 100.0
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 100.0
TIGR02470784 sucr_synth sucrose synthase. This model represents 100.0
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 100.0
TIGR02094601 more_P_ylases alpha-glucan phosphorylases. This fa 100.0
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 100.0
PLN00142815 sucrose synthase 100.0
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 100.0
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 100.0
PRK10307412 putative glycosyl transferase; Provisional 100.0
cd03796398 GT1_PIG-A_like This family is most closely related 100.0
cd04962371 GT1_like_5 This family is most closely related to 100.0
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 100.0
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 100.0
cd04299778 GT1_Glycogen_Phosphorylase_like This family is mos 100.0
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 100.0
cd03818396 GT1_ExpC_like This family is most closely related 100.0
PRK10125405 putative glycosyl transferase; Provisional 100.0
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 100.0
cd03800398 GT1_Sucrose_synthase This family is most closely r 100.0
cd03802335 GT1_AviGT4_like This family is most closely relate 100.0
cd03805392 GT1_ALG2_like This family is most closely related 100.0
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 100.0
PLN02846462 digalactosyldiacylglycerol synthase 100.0
KOG1111426 consensus N-acetylglucosaminyltransferase complex, 100.0
cd04955363 GT1_like_6 This family is most closely related to 100.0
cd03819355 GT1_WavL_like This family is most closely related 100.0
cd04951360 GT1_WbdM_like This family is most closely related 100.0
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 100.0
cd03825365 GT1_wcfI_like This family is most closely related 100.0
cd03795357 GT1_like_4 This family is most closely related to 100.0
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 100.0
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 100.0
cd03813475 GT1_like_3 This family is most closely related to 100.0
cd03821375 GT1_Bme6_like This family is most closely related 100.0
PF08323245 Glyco_transf_5: Starch synthase catalytic domain; 100.0
cd03812358 GT1_CapH_like This family is most closely related 100.0
cd03807365 GT1_WbnK_like This family is most closely related 100.0
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 100.0
cd03822366 GT1_ecORF704_like This family is most closely rela 100.0
cd03814364 GT1_like_2 This family is most closely related to 100.0
cd03816415 GT1_ALG1_like This family is most closely related 100.0
cd03823359 GT1_ExpE7_like This family is most closely related 100.0
cd03817374 GT1_UGDG_like This family is most closely related 100.0
cd03794394 GT1_wbuB_like This family is most closely related 100.0
PLN02949463 transferase, transferring glycosyl groups 100.0
cd03809365 GT1_mtfB_like This family is most closely related 100.0
cd03801374 GT1_YqgM_like This family is most closely related 100.0
cd03820348 GT1_amsD_like This family is most closely related 100.0
cd03798377 GT1_wlbH_like This family is most closely related 100.0
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 100.0
cd03806419 GT1_ALG11_like This family is most closely related 100.0
cd03808359 GT1_cap1E_like This family is most closely related 100.0
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 100.0
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 100.0
cd03811353 GT1_WabH_like This family is most closely related 100.0
PLN02501794 digalactosyldiacylglycerol synthase 100.0
PLN02275371 transferase, transferring glycosyl groups 99.98
cd04946407 GT1_AmsK_like This family is most closely related 99.98
cd03804351 GT1_wbaZ_like This family is most closely related 99.97
PHA01630331 putative group 1 glycosyl transferase 99.97
PHA01633335 putative glycosyl transferase group 1 99.97
cd04949372 GT1_gtfA_like This family is most closely related 99.96
PRK00726357 murG undecaprenyldiphospho-muramoylpentapeptide be 99.96
cd03788460 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a 99.96
cd03785350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 99.95
TIGR02400456 trehalose_OtsA alpha,alpha-trehalose-phosphate syn 99.95
TIGR01133348 murG undecaprenyldiphospho-muramoylpentapeptide be 99.95
PRK13609380 diacylglycerol glucosyltransferase; Provisional 99.94
PRK05749425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 99.92
PLN03063 797 alpha,alpha-trehalose-phosphate synthase (UDP-form 99.92
KOG0853495 consensus Glycosyltransferase [Cell wall/membrane/ 99.91
PRK14501 726 putative bifunctional trehalose-6-phosphate syntha 99.91
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 99.91
PLN02605382 monogalactosyldiacylglycerol synthase 99.91
PRK13608391 diacylglycerol glucosyltransferase; Provisional 99.89
cd04950373 GT1_like_1 Glycosyltransferases catalyze the trans 99.89
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 99.88
PRK00025380 lpxB lipid-A-disaccharide synthase; Reviewed 99.84
TIGR00236365 wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras 99.84
TIGR02398487 gluc_glyc_Psyn glucosylglycerol-phosphate synthase 99.84
cd03786363 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th 99.82
PF05693633 Glycogen_syn: Glycogen synthase; InterPro: IPR0086 99.79
COG0438381 RfaG Glycosyltransferase [Cell envelope biogenesis 99.78
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 99.76
PLN03064 934 alpha,alpha-trehalose-phosphate synthase (UDP-form 99.76
KOG1387465 consensus Glycosyltransferase [Cell wall/membrane/ 99.68
TIGR00215385 lpxB lipid-A-disaccharide synthase. Lipid-A precur 99.66
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 99.57
PF13579160 Glyco_trans_4_4: Glycosyl transferase 4-like domai 99.55
PF13439177 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 99.53
TIGR03713519 acc_sec_asp1 accessory Sec system protein Asp1. Th 99.5
KOG2941444 consensus Beta-1,4-mannosyltransferase [Posttransl 99.39
PRK12446352 undecaprenyldiphospho-muramoylpentapeptide beta-N- 99.28
PF00982474 Glyco_transf_20: Glycosyltransferase family 20; In 99.23
PRK10117474 trehalose-6-phosphate synthase; Provisional 99.22
COG0058750 GlgP Glucan phosphorylase [Carbohydrate transport 99.21
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 99.21
COG0707357 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami 99.21
cd04300797 GT1_Glycogen_Phosphorylase This is a family of oli 99.19
PF09314185 DUF1972: Domain of unknown function (DUF1972); Int 99.18
PLN02205 854 alpha,alpha-trehalose-phosphate synthase [UDP-form 99.13
PRK14985798 maltodextrin phosphorylase; Provisional 99.11
PRK14986815 glycogen phosphorylase; Provisional 99.1
TIGR02093794 P_ylase glycogen/starch/alpha-glucan phosphorylase 99.1
TIGR02919438 accessory Sec system glycosyltransferase GtfB. Mem 99.1
COG0380486 OtsA Trehalose-6-phosphate synthase [Carbohydrate 99.07
PF13477139 Glyco_trans_4_2: Glycosyl transferase 4-like 98.95
TIGR03568365 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, 98.82
KOG3742692 consensus Glycogen synthase [Carbohydrate transpor 98.8
PF00343713 Phosphorylase: Carbohydrate phosphorylase; InterPr 98.65
TIGR03492396 conserved hypothetical protein. This protein famil 98.6
cd03784401 GT1_Gtf_like This family includes the Gtfs, a grou 98.58
PF13844468 Glyco_transf_41: Glycosyl transferase family 41; P 98.49
PF13528318 Glyco_trans_1_3: Glycosyl transferase family 1 98.39
TIGR03590279 PseG pseudaminic acid biosynthesis-associated prot 98.36
COG0763381 LpxB Lipid A disaccharide synthetase [Cell envelop 98.36
PF00862550 Sucrose_synth: Sucrose synthase; InterPro: IPR0003 98.26
PF02684373 LpxB: Lipid-A-disaccharide synthetase; InterPro: I 98.25
PF04007335 DUF354: Protein of unknown function (DUF354); Inte 98.2
PRK01021608 lpxB lipid-A-disaccharide synthase; Reviewed 98.17
PF02350346 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; 98.1
COG3914620 Spy Predicted O-linked N-acetylglucosamine transfe 98.1
TIGR00661321 MJ1255 conserved hypothetical protein. This model 98.03
COG1819406 Glycosyl transferases, related to UDP-glucuronosyl 97.9
COG1519419 KdtA 3-deoxy-D-manno-octulosonic-acid transferase 97.9
PHA03392507 egt ecdysteroid UDP-glucosyltransferase; Provision 97.71
PF12000171 Glyco_trans_4_3: Gkycosyl transferase family 4 gro 97.48
COG1817346 Uncharacterized protein conserved in archaea [Func 97.4
TIGR01426392 MGT glycosyltransferase, MGT family. This model de 97.31
COG0381383 WecB UDP-N-acetylglucosamine 2-epimerase [Cell env 97.3
PRK14089347 ipid-A-disaccharide synthase; Provisional 96.95
COG4641373 Uncharacterized protein conserved in bacteria [Fun 96.91
PF11440355 AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 96.07
COG4671400 Predicted glycosyl transferase [General function p 95.79
PF11997268 DUF3492: Domain of unknown function (DUF3492); Int 95.61
PF0828890 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP 95.31
KOG1050 732 consensus Trehalose-6-phosphate synthase component 95.18
TIGR02195334 heptsyl_trn_II lipopolysaccharide heptosyltransfer 94.76
PRK02797322 4-alpha-L-fucosyltransferase; Provisional 94.48
PF07429360 Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc 94.33
PRK10422352 lipopolysaccharide core biosynthesis protein; Prov 94.07
PF04101167 Glyco_tran_28_C: Glycosyltransferase family 28 C-t 93.54
COG3660329 Predicted nucleoside-diphosphate-sugar epimerase [ 93.44
PF06258311 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP 93.34
PF04464369 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate 93.27
TIGR02201344 heptsyl_trn_III lipopolysaccharide heptosyltransfe 93.08
PLN02448459 UDP-glycosyltransferase family protein 92.66
PF1008797 DUF2325: Uncharacterized protein conserved in bact 92.45
cd03789279 GT1_LPS_heptosyltransferase Lipopolysaccharide hep 91.86
PF01075247 Glyco_transf_9: Glycosyltransferase family 9 (hept 91.83
PRK10017426 colanic acid biosynthesis protein; Provisional 91.82
PRK10916348 ADP-heptose:LPS heptosyltransferase II; Provisiona 91.73
COG0859334 RfaF ADP-heptose:LPS heptosyltransferase [Cell env 91.6
TIGR02193319 heptsyl_trn_I lipopolysaccharide heptosyltransfera 90.73
PLN02562448 UDP-glycosyltransferase 90.04
PRK10964322 ADP-heptose:LPS heptosyl transferase I; Provisiona 89.22
PLN03004451 UDP-glycosyltransferase 86.45
PLN02410451 UDP-glucoronosyl/UDP-glucosyl transferase family p 86.02
PLN02210456 UDP-glucosyl transferase 86.02
PLN03007482 UDP-glucosyltransferase family protein 85.93
PF01975196 SurE: Survival protein SurE; InterPro: IPR002828 T 85.75
COG3980318 spsG Spore coat polysaccharide biosynthesis protei 85.54
PF02951119 GSH-S_N: Prokaryotic glutathione synthetase, N-ter 85.5
PF12038168 DUF3524: Domain of unknown function (DUF3524); Int 85.07
KOG4626966 consensus O-linked N-acetylglucosamine transferase 84.71
TIGR03609298 S_layer_CsaB polysaccharide pyruvyl transferase Cs 82.27
PF03033139 Glyco_transf_28: Glycosyltransferase family 28 N-t 81.39
COG0052252 RpsB Ribosomal protein S2 [Translation, ribosomal 80.94
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information 
Probab=100.00  E-value=1.1e-103  Score=845.66  Aligned_cols=533  Identities=35%  Similarity=0.630  Sum_probs=481.5

Q ss_pred             CccccCCCchhhhHHHHHHhhccchhHHHhhhcCCCCchhHHHHHHhccCCCCCCCceEEEEEeccccccccccHHHHHh
Q 009217            1 MVLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHIIHICTEMDPLVSIGSLASYVT   80 (540)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkIl~i~~e~~P~~~~GG~~~~v~   80 (540)
                      |||+|+|+++|||+||+|||+|+.+|+++|+++++++|+|+++++++|++++++++|||+|||+|++|++++||++.++.
T Consensus       426 ~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~aKtGGLaDVv~  505 (977)
T PLN02939        426 WLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPVAKVGGLADVVS  505 (977)
T ss_pred             HHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccccccccHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEeecCCCCccccccCcceeeeeeeeecCCeeeeeEEEEEEEcCeeEEEEccCCCCCCCCCCCCCC
Q 009217           81 GLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYG  160 (540)
Q Consensus        81 ~L~~~L~~~Gh~V~vi~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~i~~~~~~~~~~~~~~y~  160 (540)
                      +|+++|+++||+|.||+|.|+++......+++.....+.++++|+.+.+++|++.++||++|+|++.++..||.|..+|+
T Consensus       506 sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg  585 (977)
T PLN02939        506 GLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYYG  585 (977)
T ss_pred             HHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCchhccCCCCCCC
Confidence            99999999999999999999987644444444333345567788788899999999999999998654445899999999


Q ss_pred             CCChhHHHHHHHHHHHHHHHHcCCCCCEEEEcCCchhhHHHHHHHHHhhcCCCCCceEEEecCCCCCCCCChhhhhhcCC
Q 009217          161 YSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGL  240 (540)
Q Consensus       161 ~~~~~~r~~~~~~~~~~~~~~~~~~pDIIH~h~~~~~~~~~~~~~~~~~~~~~~~p~V~T~H~~~~~~~~~~~~l~~~g~  240 (540)
                      +.|++.||++||+++++++.+.+++|||||||||++++++++++..|..+++.++|+|+||||+.|||.++...+..+|+
T Consensus       586 ~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL  665 (977)
T PLN02939        586 EHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGL  665 (977)
T ss_pred             CccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCC
Confidence            99999999999999999999888999999999999999988888777666667899999999999999998888888999


Q ss_pred             CccccCCCccccCCCCCccchhhhHHHhhccceeeccccchhhhhhcccCCCchHHhhhccCceEEeccCCCCCCCCCCC
Q 009217          241 DPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSN  320 (540)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~~~~~gl~~~l~~~~~ki~vI~nGvd~~~~~p~~  320 (540)
                      ++..+..++.++++ .+..+|++|.++.+||.|+|||++|++++.. .+|.||++++..+.+|+.+|+||||++.|+|.+
T Consensus       666 ~~~~l~~~d~le~~-~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPat  743 (977)
T PLN02939        666 DVHQLDRPDRMQDN-AHGRINVVKGAIVYSNIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPST  743 (977)
T ss_pred             CHHHccChhhhhhc-cCCchHHHHHHHHhCCeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhcCCcc
Confidence            98877667777543 2357999999999999999999999999987 789999999999999999999999999999999


Q ss_pred             CcccccccCcccccCcHHHHHHHHHHhCCCCC-CCceEEEEEecccccCCHHHHHHHHHHHHhcCcEEEEEecCCChhHH
Q 009217          321 DKFLTENYCAEDMKGKTVCKVTLQQQLGLSKD-ASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSAS  399 (540)
Q Consensus       321 ~~~l~~~~~~~~~~~k~~~~~~lr~~~gl~~~-~~~~lv~~vgrl~~~KG~~~Li~A~~~l~~~~~~lvi~G~g~~~~~~  399 (540)
                      |++++.+|++++++||..++.++++++|++.+ ++.|+|+|+||+.++||++.|++|+..+.+.+++|+|+|+|+.+.++
T Consensus       744 D~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e  823 (977)
T PLN02939        744 DRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQ  823 (977)
T ss_pred             ccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHH
Confidence            99999999999999999999999999999853 46799999999999999999999999887778999999998766677


Q ss_pred             HHHHHHHHHhCC-CcEEEEEecChHHHHHHHhcCCEEEECCCCCCCchHHHHHHhcCCceEEEecCCCccccceeccCC-
Q 009217          400 RALVSFQEELKD-GIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHE-  477 (540)
Q Consensus       400 ~~l~~l~~~~~~-~~v~f~~~~~~~~~~~~~~~aDi~v~PS~~E~fglv~lEAma~G~pvI~~~~~~gg~~e~v~~~~~-  477 (540)
                      +.+++++++++. ++|+|++.+++.+.+.+|++||+||+||++||||+++||||+||+|||++++  ||+.|+|.+... 
T Consensus       824 ~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~v--GGL~DtV~d~d~e  901 (977)
T PLN02939        824 REFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKT--GGLNDSVFDFDDE  901 (977)
T ss_pred             HHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecC--CCCcceeecCCcc
Confidence            889999999874 7899999999998899999999999999999999999999999999999999  999999864210 


Q ss_pred             ---ccccceeecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHh
Q 009217          478 ---STRFSRFISSTFGNISLSQALEEIK----NNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIK  538 (540)
Q Consensus       478 ---~~g~~G~l~~~~d~~~la~ai~~l~----~~~~~~~~~~~~a~~~~fsw~~~a~~~y~~lY~~l~  538 (540)
                         ..|.|||+|++.|+++|+++|.+++    +|++.|++|+++++.++|||+.++++ |+++|+++.
T Consensus       902 ~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe~~A~q-YeeLY~~ll  968 (977)
T PLN02939        902 TIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQ-YEELYQRAV  968 (977)
T ss_pred             ccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHHHHHHH-HHHHHHHHH
Confidence               1257899999999999999988765    48999999999999899999999999 699999874

>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>TIGR02470 sucr_synth sucrose synthase Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>TIGR02094 more_P_ylases alpha-glucan phosphorylases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10125 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PLN02846 digalactosyldiacylglycerol synthase Back     alignment and domain information
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02501 digalactosyldiacylglycerol synthase Back     alignment and domain information
>PLN02275 transferase, transferring glycosyl groups Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase Back     alignment and domain information
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase Back     alignment and domain information
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) Back     alignment and domain information
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 Back     alignment and domain information
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>TIGR00215 lpxB lipid-A-disaccharide synthase Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A Back     alignment and domain information
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A Back     alignment and domain information
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 Back     alignment and domain information
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed Back     alignment and domain information
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10117 trehalose-6-phosphate synthase; Provisional Back     alignment and domain information
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases Back     alignment and domain information
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>PRK14985 maltodextrin phosphorylase; Provisional Back     alignment and domain information
>PRK14986 glycogen phosphorylase; Provisional Back     alignment and domain information
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>TIGR02919 accessory Sec system glycosyltransferase GtfB Back     alignment and domain information
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like Back     alignment and domain information
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing Back     alignment and domain information
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03492 conserved hypothetical protein Back     alignment and domain information
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin Back     alignment and domain information
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A Back     alignment and domain information
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 Back     alignment and domain information
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG Back     alignment and domain information
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 Back     alignment and domain information
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length Back     alignment and domain information
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 Back     alignment and domain information
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00661 MJ1255 conserved hypothetical protein Back     alignment and domain information
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] Back     alignment and domain information
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional Back     alignment and domain information
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria Back     alignment and domain information
>COG1817 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information
>TIGR01426 MGT glycosyltransferase, MGT family Back     alignment and domain information
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14089 ipid-A-disaccharide synthase; Provisional Back     alignment and domain information
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E Back     alignment and domain information
>COG4671 Predicted glycosyl transferase [General function prediction only] Back     alignment and domain information
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes Back     alignment and domain information
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins Back     alignment and domain information
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II Back     alignment and domain information
>PRK02797 4-alpha-L-fucosyltransferase; Provisional Back     alignment and domain information
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) Back     alignment and domain information
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional Back     alignment and domain information
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins Back     alignment and domain information
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria Back     alignment and domain information
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative Back     alignment and domain information
>PLN02448 UDP-glycosyltransferase family protein Back     alignment and domain information
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) Back     alignment and domain information
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10017 colanic acid biosynthesis protein; Provisional Back     alignment and domain information
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional Back     alignment and domain information
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I Back     alignment and domain information
>PLN02562 UDP-glycosyltransferase Back     alignment and domain information
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional Back     alignment and domain information
>PLN03004 UDP-glycosyltransferase Back     alignment and domain information
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein Back     alignment and domain information
>PLN02210 UDP-glucosyl transferase Back     alignment and domain information
>PLN03007 UDP-glucosyltransferase family protein Back     alignment and domain information
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family Back     alignment and domain information
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 Back     alignment and domain information
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes Back     alignment and domain information
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB Back     alignment and domain information
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query540
2qzs_A485 Crystal Structure Of Wild-Type E.Coli Gs In Complex 2e-19
3cop_A485 Crystal Structure Of E.Coli Gs Mutant E377a In Comp 3e-19
3d1j_A477 Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408 4e-18
1rzu_A485 Crystal Structure Of The Glycogen Synthase From A. 9e-15
3vue_A536 Crystal Structure Of Rice Granule Bound Starch Synt 1e-13
1rzv_A485 Crystal Structure Of The Glycogen Synthase From Agr 4e-13
3fro_A439 Crystal Structure Of Pyrococcus Abyssi Glycogen Syn 8e-07
3l01_A428 Crystal Structure Of Monomeric Glycogen Synthase Fr 8e-07
2bis_A440 Structure Of Glycogen Synthase From Pyrococcus Abys 8e-07
>pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) Length = 485 Back     alignment and structure 
Iteration: 1

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/486 (22%), Positives = 185/486 (38%), Gaps = 44/486 (9%)
Query: 57  FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKA 116
             ++H+C+EM PL+  G LA  +  L  A    G    V+LP +  +   GV   + +  
Sbjct: 1   MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIR-RGVTDAQVVSR 59
Query: 117 ECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHY----SSFFNRESVYGYSDDFERFTYFS 172
                F G +    +  G  +G+G+  I   H      S ++  +++ Y+D+  RF    
Sbjct: 60  R--DTFAGHI---TLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLG 114
Query: 173 R--ASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRIXXX--XXXXXXXX 228
              A +   +    +PDV+H H+W   +  P +      +G     +             
Sbjct: 115 WVGAEMASGLDPFWRPDVVHAHDWHAGLA-PAY---LAARGRPAKSVFTVHNLAYQGMFY 170
Query: 229 XEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRS 288
             H + + L    P        L+ N +   ++ LK G+ Y++ +  VS  +++      
Sbjct: 171 AHHMNDIQL----PWSFFNIHGLEFNGQ---ISFLKAGLYYADHITAVSPTYAREITEPQ 223
Query: 289 LSHGLESTLAIH--QDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQ 346
            ++G+E  L     + +L     G D   W P  D  L   Y  + ++ K   K  LQ  
Sbjct: 224 FAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIA 283
Query: 347 LGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQ 406
           +GL  D    +   +    S   L+ +   + G   +G Q    G    P      ++  
Sbjct: 284 MGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD-PVLQEGFLAAA 342
Query: 407 EELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAP-------I 459
            E    + + +  Y +A  H I  G+D+IL  S  +P     L  LKYG  P       +
Sbjct: 343 AEYPGQVGVQI-GYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGL 401
Query: 460 AVTSSDIEFRHFAEFDHEXXXXXXXXXXXXGNISLSQALEE---IKNNPLSWKRKIKDAM 516
           A T SD    + A+                   SL +A+     + + P  W+   + AM
Sbjct: 402 ADTVSDCSLENLAD-----GVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAM 456
Query: 517 LQDFSW 522
             DFSW
Sbjct: 457 AMDFSW 462
>pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso Length = 485 Back     alignment and structure
>pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s) Length = 477 Back     alignment and structure
>pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485 Back     alignment and structure
>pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 Back     alignment and structure
>pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) Length = 485 Back     alignment and structure
>pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 Back     alignment and structure
>pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 Back     alignment and structure
>pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query540
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 8e-76
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 9e-73
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 8e-58
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 8e-19
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 2e-07
3nb0_A 725 Glycogen [starch] synthase isoform 2; glycogen syn 2e-05
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 3e-05
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 Back     alignment and structure
 Score =  246 bits (631), Expect = 8e-76
 Identities = 110/507 (21%), Positives = 193/507 (38%), Gaps = 84/507 (16%)

Query: 58  HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAE 117
            ++H+C+EM PL+  G LA  +  L  A    G    V+LP +  +   GV   + +   
Sbjct: 2   QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDI-RRGVTDAQVV--- 57

Query: 118 CYSYFNGQLHANKIWIGVVSGIGVTFIQPLHY----SSFFNRESVYGYSDDFERFTYFSR 173
             S  +       +  G  +G+G+  I   H      S ++  +++ Y+D+  RF     
Sbjct: 58  --SRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGW 115

Query: 174 ASLDYI--VKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEH 231
              +    +    +PDV+H H+W   +  P +    +       + + + HNL      +
Sbjct: 116 VGAEMASGLDPFWRPDVVHAHDWHAGLA-PAY----LAARGRPAKSVFTVHNL-----AY 165

Query: 232 -----PDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRII 286
                   +    L  +  +    L+ N +   ++ LK G+ Y++ +  VS  ++  R I
Sbjct: 166 QGMFYAHHMNDIQLPWSFFN-IHGLEFNGQ---ISFLKAGLYYADHITAVSPTYA--REI 219

Query: 287 RS--LSHGLESTLAI--HQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVT 342
                ++G+E  L     + +L     G D   W P  D  L   Y  + ++ K   K  
Sbjct: 220 TEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQ 279

Query: 343 LQQQLGLSKDASTIVVGCIFSDVS--------DVFLENLKAVVRGAKMRGIQFVFTGTNK 394
           LQ  +GL  D    +       VS        D+ LE L  ++     +G Q    G   
Sbjct: 280 LQIAMGLKVDDKVPLFAV----VSRLTSQKGLDLVLEALPGLLE----QGGQLALLGAGD 331

Query: 395 LPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDP--LLQVPLKAL 452
            P      ++   E    + + +  Y +A  H I  G+D+IL  S  +P  L Q  L  L
Sbjct: 332 -PVLQEGFLAAAAEYPGQVGVQIG-YHEAFSHRIMGGADVILVPSRFEPCGLTQ--LYGL 387

Query: 453 KYGAAPIA---------VTSSDIEFRHFAEFDHESTRFSRFISSTFGNIS---LSQALE- 499
           KYG  P+          V     +       D  ++ F       F + +   L +A+  
Sbjct: 388 KYGTLPLVRRTGGLADTV----SDCSLENLADGVASGF------VFEDSNAWSLLRAIRR 437

Query: 500 --EIKNNPLSWKRKIKDAMLQDFSWDA 524
              + + P  W+   + AM  DFSW  
Sbjct: 438 AFVLWSRPSLWRFVQRQAMAMDFSWQV 464
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query540
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 100.0
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 100.0
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 100.0
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 100.0
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 100.0
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 100.0
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 100.0
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 100.0
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 100.0
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 100.0
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 100.0
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 100.0
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 100.0
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 100.0
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 100.0
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 100.0
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 100.0
2hy7_A406 Glucuronosyltransferase GUMK; glycosyltransferases 100.0
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 100.0
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 100.0
1uqt_A482 Alpha, alpha-trehalose-phosphate synthase; glycosy 100.0
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 99.98
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 99.97
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.97
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 99.96
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 99.96
3t5t_A496 Putative glycosyltransferase; GTB fold, pseudoglyc 99.95
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 99.94
1v4v_A376 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t 99.94
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 99.9
2xci_A374 KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci 99.9
3otg_A412 CALG1; calicheamicin, TDP, structural genomics, PS 99.85
3dzc_A396 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.84
3ot5_A403 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.82
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 99.78
3s2u_A365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 99.77
2iyf_A430 OLED, oleandomycin glycosyltransferase; antibiotic 99.76
4fzr_A398 SSFS6; structural genomics, PSI-biology, protein s 99.76
3ia7_A402 CALG4; glycosysltransferase, calicheamicin, enediy 99.69
3tsa_A391 SPNG, NDP-rhamnosyltransferase; glycosyltransferas 99.68
3oti_A398 CALG3; calicheamicin, TDP, structural genomics, PS 99.67
3rsc_A415 CALG2; TDP, enediyne, structural genomics, PSI-2, 99.63
2p6p_A384 Glycosyl transferase; X-RAY-diffraction,urdamycina 99.56
4hwg_A385 UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc 99.53
2iya_A424 OLEI, oleandomycin glycosyltransferase; carbohydra 99.33
3h4t_A404 Glycosyltransferase GTFA, glycosyltransferase; van 99.31
3q3e_A631 HMW1C-like glycosyltransferase; N-glycosylation; 2 99.22
1iir_A415 Glycosyltransferase GTFB; rossmann fold; 1.80A {Am 99.07
4amg_A400 Snogd; transferase, polyketide biosynthesis, GT1 f 99.07
1rrv_A416 Glycosyltransferase GTFD; GT-B, glycosyltransferas 99.02
2o6l_A170 UDP-glucuronosyltransferase 2B7; drug metabolism, 98.95
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 98.93
2yjn_A441 ERYCIII, glycosyltransferase; transferase, cytochr 98.69
4gyw_A723 UDP-N-acetylglucosamine--peptide N- acetylglucosam 98.31
1psw_A348 ADP-heptose LPS heptosyltransferase II; structural 96.81
3hbm_A282 UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je 96.07
3tov_A349 Glycosyl transferase family 9; structural genomics 95.75
2c1x_A456 UDP-glucose flavonoid 3-O glycosyltransferase; WIN 95.43
3hbf_A454 Flavonoid 3-O-glucosyltransferase; glycosyltransfe 94.76
2pq6_A482 UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl 94.43
2gt1_A326 Lipopolysaccharide heptosyltransferase-1; GT-B fol 93.45
2acv_A463 Triterpene UDP-glucosyl transferase UGT71G1; glyco 93.04
1xv5_A401 AGT, DNA alpha-glucosyltransferase; HET: DNA CME U 90.88
2vch_A480 Hydroquinone glucosyltransferase; glycosyltransfer 89.83
3to5_A134 CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, p 85.58
3grc_A140 Sensor protein, kinase; protein structure initiati 84.56
3l7i_A729 Teichoic acid biosynthesis protein F; GT-B fold, m 84.47
2yjn_A441 ERYCIII, glycosyltransferase; transferase, cytochr 84.34
3nbm_A108 PTS system, lactose-specific IIBC components; PTS_ 83.31
4b4o_A298 Epimerase family protein SDR39U1; isomerase; HET: 81.41
3h5i_A140 Response regulator/sensory box protein/ggdef domai 80.72
4gi5_A280 Quinone reductase; protein structure initiative, F 80.59
2jzc_A224 UDP-N-acetylglucosamine transferase subunit ALG13; 80.44
3ty2_A261 5'-nucleotidase SURE; surviVal protein, phosphatas 80.26
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-75  Score=625.88  Aligned_cols=470  Identities=21%  Similarity=0.323  Sum_probs=384.9

Q ss_pred             CCCCCceEEEEEeccccccccccHHHHHhHHHHHHHHcCCeEEEEeecCCCCccccccCcceeeeeeeeecCCeeeeeEE
Q 009217           52 SKKNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKI  131 (540)
Q Consensus        52 ~~~~~mkIl~i~~e~~P~~~~GG~~~~v~~L~~~L~~~Gh~V~vi~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  131 (540)
                      .++..||||||++|++|++++||+++++.+|+++|+++||+|+||+|.|+.....     .+......+.+.++...+++
T Consensus         5 ~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~-----~~~~~~~~~~~~~~~~~~~~   79 (536)
T 3vue_A            5 HHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDA-----WDTSVVAEIKVADRYERVRF   79 (536)
T ss_dssp             ---CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTC-----EEEEEEEEEEETTEEEEEEE
T ss_pred             cCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhh-----cccceEEEEEecCceEEEEE
Confidence            4577899999999999999999999999999999999999999999999876432     12223445667788888899


Q ss_pred             EEEEEcCeeEEEEccCCCCCCCCC------CCCCC------CCChhHHHHHHHHHHHHHHHHcC-----------CCCCE
Q 009217          132 WIGVVSGIGVTFIQPLHYSSFFNR------ESVYG------YSDDFERFTYFSRASLDYIVKSR-----------KQPDV  188 (540)
Q Consensus       132 ~~~~~~gv~v~~i~~~~~~~~~~~------~~~y~------~~~~~~r~~~~~~~~~~~~~~~~-----------~~pDI  188 (540)
                      ++...+|+++|+|+.   +.||.+      ..+|+      |.|+..||.+|++++++.++.++           ..|||
T Consensus        80 ~~~~~~gv~~y~id~---~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddI  156 (536)
T 3vue_A           80 FHCYKRGVDRVFIDH---PSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVV  156 (536)
T ss_dssp             EECEETTEEEEEEEC---TTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEE
T ss_pred             EEEEECCceEEEecC---hhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEE
Confidence            999999999999984   446654      23453      78899999999999999887643           34679


Q ss_pred             EEEcCCchhhHHHHHHHHHhhcC-CCCCceEEEecCCCCCCCCChhhhhhcCCCccccCCCcc---ccCCCCCccchhhh
Q 009217          189 LHIHNWETAIVGPLFWDIFVKQG-LEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDR---LQDNTKTHLVNILK  264 (540)
Q Consensus       189 IH~h~~~~~~~~~~~~~~~~~~~-~~~~p~V~T~H~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~  264 (540)
                      +|+|||+++++|.+++..+...+ +.++|+|+|+||+.++|.++...+..++++.......+.   .........+|+++
T Consensus       157 iH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k  236 (536)
T 3vue_A          157 FVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMK  236 (536)
T ss_dssp             EEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHH
T ss_pred             EEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHH
Confidence            99999999999999887654322 358999999999999999887777666665543211111   11111235689999


Q ss_pred             HHHhhccceeeccccchhhhhhcccCCCchHHhhhccCceEEeccCCCCCCCCCCCCcccccccCccc-ccCcHHHHHHH
Q 009217          265 GGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAED-MKGKTVCKVTL  343 (540)
Q Consensus       265 ~~~~~ad~vi~vS~~~~~~~~~~~~~~gl~~~l~~~~~ki~vI~nGvd~~~~~p~~~~~l~~~~~~~~-~~~k~~~~~~l  343 (540)
                      .++.+||.|+|||+++++++... ++.|+......+..++.+|+||||++.|+|.+|..++.+|+..+ +++|..+|..+
T Consensus       237 ~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l  315 (536)
T 3vue_A          237 AGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEAL  315 (536)
T ss_dssp             HHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHH
T ss_pred             HHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHH
Confidence            99999999999999999998753 33333222233568999999999999999999999999998766 67899999999


Q ss_pred             HHHhCCCCCCCceEEEEEecccccCCHHHHHHHHHHHHhcCcEEEEEecCCChhHHHHHHHHHHHhCCCcEEEEEecChH
Q 009217          344 QQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDA  423 (540)
Q Consensus       344 r~~~gl~~~~~~~lv~~vgrl~~~KG~~~Li~A~~~l~~~~~~lvi~G~g~~~~~~~~l~~l~~~~~~~~v~f~~~~~~~  423 (540)
                      ++++|++.+++.|+|+|+||+.++||++.|++|++++.+.+.+|+|+|.|+ +.....++.++..++ ++|.|.+.++++
T Consensus       316 ~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~-~~~~~~~~~~~~~~~-~~v~~~~~~~~~  393 (536)
T 3vue_A          316 QAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK-KKFEKLLKSMEEKYP-GKVRAVVKFNAP  393 (536)
T ss_dssp             HHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC-HHHHHHHHHHHHHST-TTEEEECSCCHH
T ss_pred             HHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC-chHHHHHHHHHhhcC-CceEEEEeccHH
Confidence            999999988889999999999999999999999999988899999999775 556777888888875 799999999999


Q ss_pred             HHHHHHhcCCEEEECCCCCCCchHHHHHHhcCCceEEEecCCCccccceeccCCcccc-------ceeecCCCCHHHHHH
Q 009217          424 LLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTRF-------SRFISSTFGNISLSQ  496 (540)
Q Consensus       424 ~~~~~~~~aDi~v~PS~~E~fglv~lEAma~G~pvI~~~~~~gg~~e~v~~~~~~~g~-------~G~l~~~~d~~~la~  496 (540)
                      +.+.+|++||+||+||++||||++++|||+||+|||+|++  ||++|+|.++.  +|.       +|+++++.|+++|++
T Consensus       394 ~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~--gG~~e~V~dg~--~G~~~~~~~~~g~l~~~~d~~~la~  469 (536)
T 3vue_A          394 LAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACAST--GGLVDTVIEGK--TGFHMGRLSVDCKVVEPSDVKKVAA  469 (536)
T ss_dssp             HHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSC--THHHHHCCBTT--TEEECCCCCSCTTCCCHHHHHHHHH
T ss_pred             HHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCC--CCchheeeCCC--CccccccCCCceeEECCCCHHHHHH
Confidence            9999999999999999999999999999999999999999  99999998532  221       234788889999999


Q ss_pred             HHHHHhc--CHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHH
Q 009217          497 ALEEIKN--NPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAI  537 (540)
Q Consensus       497 ai~~l~~--~~~~~~~~~~~a~~~~fsw~~~a~~~y~~lY~~l  537 (540)
                      +|.++++  +.+.|+++++++++++|||+++|++ |+++|+++
T Consensus       470 ai~ral~~~~~~~~~~~~~~am~~~fSW~~~A~~-y~~ly~~L  511 (536)
T 3vue_A          470 TLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKN-WENVLLGL  511 (536)
T ss_dssp             HHHHHHHHTTSHHHHHHHHHHHHSCCSSHHHHHH-HHHHHHTT
T ss_pred             HHHHHHHhcCcHHHHHHHHHHHHhcCCHHHHHHH-HHHHHHHh
Confidence            9987664  4456889999999999999999999 69999987
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} Back     alignment and structure
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Back     alignment and structure
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Back     alignment and structure
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Back     alignment and structure
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Back     alignment and structure
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Back     alignment and structure
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Back     alignment and structure
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} Back     alignment and structure
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* Back     alignment and structure
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A Back     alignment and structure
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* Back     alignment and structure
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Back     alignment and structure
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* Back     alignment and structure
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 Back     alignment and structure
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* Back     alignment and structure
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} Back     alignment and structure
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Back     alignment and structure
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* Back     alignment and structure
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Back     alignment and structure
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* Back     alignment and structure
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Back     alignment and structure
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A* Back     alignment and structure
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Back     alignment and structure
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae} Back     alignment and structure
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP} Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae} Back     alignment and structure
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} Back     alignment and structure
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} Back     alignment and structure
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp} Back     alignment and structure
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Back     alignment and structure
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 540
d1rzua_477 c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte 5e-56
d2bisa1437 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro 1e-22
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  192 bits (489), Expect = 5e-56
 Identities = 91/478 (19%), Positives = 170/478 (35%), Gaps = 27/478 (5%)

Query: 58  HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAE 117
           +++ + +E+ PL+  G LA  V  L  AL+  G     ++P Y  +       ++  +  
Sbjct: 2   NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFE-- 59

Query: 118 CYSYFNGQLHANKIWIGVVSGIGVTFIQPLHY----SSFFNRESVYGYSDDFERFTYFSR 173
              + +       +       + +  +    Y       +  ++   Y D+++RF   S 
Sbjct: 60  ---FTDLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSL 116

Query: 174 ASLDYI--VKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEH 231
           A+      V    +PD++H H+W+ A+                   LL+ HN+       
Sbjct: 117 AAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRY----AETPEIPSLLTIHNIAFQGQFG 172

Query: 232 PDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSH 291
            +  +   L             N     V+ LKGG+  +  +  VS  +++  +      
Sbjct: 173 ANIFSKLALPAHAFGMEGIEYYND----VSFLKGGLQTATALSTVSPSYAEEILTAEFGM 228

Query: 292 GLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSK 351
           GLE  +      L     G D+  W+P+ D  + +NY A ++K + + K  + +   +  
Sbjct: 229 GLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD 288

Query: 352 DASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKD 411
           D S +                 +AV       G + V  G   +      L +       
Sbjct: 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVS-LGGRLVVLGAGDVALEGALLAAASR--HH 345

Query: 412 GIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE--FR 469
           G V     Y++ L HL+ +G D I+  S  +P     L AL+YG  P+   +  +     
Sbjct: 346 GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVI 405

Query: 470 HFAEFDHESTRFSRFISSTFGNISLSQALE---EIKNNPLSWKRKIKDAMLQDFSWDA 524
                   S   +    S      L QA+       ++P  W +  K  M  D SW+ 
Sbjct: 406 DANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEK 463
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query540
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 100.0
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 100.0
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 100.0
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 99.95
d1uqta_456 Trehalose-6-phosphate synthase, OtsA {Escherichia 99.94
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 99.9
d1l5wa_796 Maltodextrin phosphorylase (MALP) {Escherichia col 99.59
d2gj4a1824 Glycogen phosphorylase {Rabbit (Oryctolagus cunicu 99.52
d1ygpa_876 Glycogen phosphorylase {Baker's yeast (Saccharomyc 99.21
d1rrva_401 TDP-vancosaminyltransferase GftD {Amycolatopsis or 98.96
d1pn3a_391 TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi 98.9
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 98.77
d1iira_401 UDP-glucosyltransferase GtfB {Amycolatopsis orient 98.47
d1v4va_373 UDP-N-acetylglucosamine 2-epimerase {Thermus therm 97.81
d2c1xa1450 UDP glucose:flavonoid 3-o-glucosyltransferase {Gra 97.52
d1f6da_376 UDP-N-acetylglucosamine 2-epimerase {Escherichia c 96.44
d2vcha1471 Hydroquinone glucosyltransferase {Thale cress (Ara 94.94
d1o6ca_377 UDP-N-acetylglucosamine 2-epimerase {Bacillus subt 94.79
d1pswa_348 ADP-heptose LPS heptosyltransferase II {Escherichi 94.18
d2acva1461 Triterpene UDP-glucosyl transferase UGT71G1 {Medic 93.15
d2pq6a1473 (Iso)flavonoid glycosyltransferase {Medicago trunc 92.94
d1ydga_201 Trp repressor binding protein WrbA {Deinococcus ra 84.06
d1jaya_212 Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae 82.55
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 81.54
d1kgsa2122 PhoB receiver domain {Thermotoga maritima [TaxId: 81.01
d2d1pa1128 tRNA 2-thiouridine synthesizing protein D, TusD {E 80.94
d1w25a1139 Response regulator PleD, receiver domain {Caulobac 80.35
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=4.2e-67  Score=554.55  Aligned_cols=461  Identities=19%  Similarity=0.298  Sum_probs=377.9

Q ss_pred             ceEEEEEeccccccccccHHHHHhHHHHHHHHcCCeEEEEeecCCCCccccccCcceeeeeeeeecCCeeeeeEEEEEEE
Q 009217           57 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVV  136 (540)
Q Consensus        57 mkIl~i~~e~~P~~~~GG~~~~v~~L~~~L~~~Gh~V~vi~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  136 (540)
                      |||||||+||+|+.++||+|.++.+|+++|+++||+|+||+|.|++++......++..     .+.......+++++...
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~   75 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCF-----EFTDLLGEKADLLEVQH   75 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEE-----EESCSSSCCEEEEEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEE-----EEeccCCceEEEEEEEE
Confidence            9999999999998889999999999999999999999999999987654322222221     11222234467777788


Q ss_pred             cCeeEEEEccCCCCCCCCCC-------CCCCCCChhHHHHHHHHHHHHHHHHc--CCCCCEEEEcCCchhhHHHHHHHHH
Q 009217          137 SGIGVTFIQPLHYSSFFNRE-------SVYGYSDDFERFTYFSRASLDYIVKS--RKQPDVLHIHNWETAIVGPLFWDIF  207 (540)
Q Consensus       137 ~gv~v~~i~~~~~~~~~~~~-------~~y~~~~~~~r~~~~~~~~~~~~~~~--~~~pDIIH~h~~~~~~~~~~~~~~~  207 (540)
                      +|++++++++   +.+|.+.       ....|.+++.++..|++++.++++..  +++|||||+|+|++++++.+++.  
T Consensus        76 ~~v~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~--  150 (477)
T d1rzua_          76 ERLDLLILDA---PAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRY--  150 (477)
T ss_dssp             TTEEEEEEEC---HHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHH--
T ss_pred             CCeeEEEecC---hhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHH--
Confidence            9999999974   2233222       12236788888999999988887763  57899999999999988776654  


Q ss_pred             hhcCCCCCceEEEecCCCCCCCCChhhhhhcCCCccccCCCccccCCCCCccchhhhHHHhhccceeeccccchhhhhhc
Q 009217          208 VKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIR  287 (540)
Q Consensus       208 ~~~~~~~~p~V~T~H~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~vS~~~~~~~~~~  287 (540)
                        .+..++|+|+|+|++.+.+.++...+..++.+...+. ......+   ...++++.++..+|.++++|+.+++++...
T Consensus       151 --~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~  224 (477)
T d1rzua_         151 --AETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFG-MEGIEYY---NDVSFLKGGLQTATALSTVSPSYAEEILTA  224 (477)
T ss_dssp             --SSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSS-TTTTEET---TEEEHHHHHHHHCSEEEESCHHHHHHTTSH
T ss_pred             --hhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcc-ccccccc---chhHHHHHHHHhhhhhhhccHHHHHHHHHH
Confidence              3347899999999998887777776666666554332 1111122   356788889999999999999999988766


Q ss_pred             ccCCCchHHhhhccCceEEeccCCCCCCCCCCCCcccccccCcccccCcHHHHHHHHHHhCCCCCCCceEEEEEeccccc
Q 009217          288 SLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSD  367 (540)
Q Consensus       288 ~~~~gl~~~l~~~~~ki~vI~nGvd~~~~~p~~~~~l~~~~~~~~~~~k~~~~~~lr~~~gl~~~~~~~lv~~vgrl~~~  367 (540)
                      ..+.+.+.....+..++.+|+||+|.+.|+|..+.+++.+++.+...++..++.+++.+.+++. ++.++++|+||++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~vgrl~~~  303 (477)
T d1rzua_         225 EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD-DGSPLFCVISRLTWQ  303 (477)
T ss_dssp             HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCC-SSSCEEEEESCBSTT
T ss_pred             hcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhccccc-CCccEEEEEeeeeec
Confidence            6667777777667889999999999999999999999988888888888888999999999975 357899999999999


Q ss_pred             CCHHHHHHHHHHHHhcCcEEEEEecCCChhHHHHHHHHHHHhCCCcEEEEEecChHHHHHHHhcCCEEEECCCCCCCchH
Q 009217          368 VFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQV  447 (540)
Q Consensus       368 KG~~~Li~A~~~l~~~~~~lvi~G~g~~~~~~~~l~~l~~~~~~~~v~f~~~~~~~~~~~~~~~aDi~v~PS~~E~fglv  447 (540)
                      ||++.|++|++++.+.+++|+++|.|+ +.....+++++..++ ++|.|.+.+++++...+|++||+||+||.+||||++
T Consensus       304 KG~~~Ll~a~~~~~~~~~~l~~~G~G~-~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv  381 (477)
T d1rzua_         304 KGIDLMAEAVDEIVSLGGRLVVLGAGD-VALEGALLAAASRHH-GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLT  381 (477)
T ss_dssp             TTHHHHHTTHHHHHHTTCEEEEEECBC-HHHHHHHHHHHHHTT-TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSH
T ss_pred             CCcHHHHHHHHHHHhhCCeEEEEecCC-chHHHHHHHHHhhcC-CeEEEEcccChhHHHHHHHhCccccCCccccCCCHH
Confidence            999999999999988899999999775 455667777777775 899999999999999999999999999999999999


Q ss_pred             HHHHHhcCCceEEEecCCCccccceeccCC----ccccceeecCCCCHHHHHHHHHHHh---cCHHHHHHHHHHHHhccC
Q 009217          448 PLKALKYGAAPIAVTSSDIEFRHFAEFDHE----STRFSRFISSTFGNISLSQALEEIK---NNPLSWKRKIKDAMLQDF  520 (540)
Q Consensus       448 ~lEAma~G~pvI~~~~~~gg~~e~v~~~~~----~~g~~G~l~~~~d~~~la~ai~~l~---~~~~~~~~~~~~a~~~~f  520 (540)
                      ++||||||+|||+|++  ||++|+|.+...    ..+.+|+++++.|+++|+++|.+++   +||++|++|+++|++++|
T Consensus       382 ~lEAma~G~PvVas~~--GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~~~~f  459 (477)
T d1rzua_         382 QLYALRYGCIPVVART--GGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDV  459 (477)
T ss_dssp             HHHHHHHTCEEEEESS--HHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHcCCCEEEcCC--CCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHhhC
Confidence            9999999999999999  999999975320    1234689999999999999998765   599999999999999999


Q ss_pred             ChHHHHHHHHHHHHHHHhc
Q 009217          521 SWDADCNDIHISAYTAIKN  539 (540)
Q Consensus       521 sw~~~a~~~y~~lY~~l~~  539 (540)
                      ||+++|++ |+++|+++.+
T Consensus       460 sw~~~a~~-~~~lY~~ll~  477 (477)
T d1rzua_         460 SWEKSAGL-YAALYSQLIS  477 (477)
T ss_dssp             BHHHHHHH-HHHHHHHHTC
T ss_pred             CHHHHHHH-HHHHHHHHhC
Confidence            99999999 6999999864
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Back     information, alignment and structure
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Back     information, alignment and structure
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Back     information, alignment and structure
>d1ydga_ c.23.5.8 (A:) Trp repressor binding protein WrbA {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]} Back     information, alignment and structure