Citrus Sinensis ID: 009242

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------54
MARTLLLPLLVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP
ccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccccccEEEEEEcccccccEEEEEEccEEEEEEEEccccccEEEcccccccccccccccccccccccccccEEEEEEEcccEEEEEEccccccccccccEEEEEEEcccccccccccccccEEEEEcccccccHHHHHHHHccccccccccccccccccccEEEEccccEEEEEEEEcccccEEEEEEcccEEEEEEEccccccEEEEcEEEEcccccEEEEEEccccccccEEEEEcccccccccEEEEEEEccccccccccccccccccccccHHHHHcccccccccccccccccccccccccEEEEEEEcccccccccEEEEEEcccccccccccHHHHHHccccccccccccccccccccccccEEEEEEccccEEEEEEEccccccccccccccccEEEEEccccccccccccccccccccccEEEEccccEEEEEEEcccccccHHccccHHHHHHccEEEEEEEcccccccccccccccHHHHHHHccccc
ccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEcccEccccccEEEEEcccccccEEEEEcccEEEEEEEEcccccEEEEEccHHHccccccccccccccccccccEEEEEEEEEccccEHEHHHHHHHHHHccccEEEEEEccccccccccccccccEEEEEcHccccHHHHHHHHHcccccccccEEEEccccccEEEcccccEEEEEEEEccccccEEEEEEccEEEEEEEEEEEEEcccEEEEEEEccccEEEEEEcccccccEEEEEEEcccccccEEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEEEEEEEEEcccccccccEEEEEEEcEEEcccccHHHHHHHcccccEEEcccccccccccccccccEEEEEEcccEEEEcccccccccEEEEEccccEEEEEEEEccccHHHHHHcccccccEEcEEEEcccEEEEEEEEccccEEEEEEEccHHHHHcccEEEEEEEccccccccccccccccccccccccccc
MARTLLLPLLVCVVLAALSVALvkaddpyrfytwtvtsgtlsplgvpqevilingqfpgprldvvtndniILNVINkldqpflltWNGIkqrknswqdgvlgtncpippnsnytykfqtkdqigsyfyfpstlmhraaggygginiyqrpripipypiqdgdftllIGDWFKTNHKILRQTldsgkslpfpdgvlingqghttfngdqgkTYMFRIsnvglstsfnfRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTlnqppkdyyIVASTRFTKNVLTATAILHytnshspasgplptgptyeihwSMKQARTFRWNltanaarpnpqgsfhygkinttRTIVLansaplingklryavngisyvnsdtplkladyfnipgifsvnsiqsvpsggasSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGygsgqwaaeKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLaneydipsnilvcgkavghhp
MARTLLLPLLVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYtnshspasgpLPTGPTYEIHWSMKQARTFRWNLTANAarpnpqgsfhygkINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP
MartlllpllvcvvlaalsvalvkaDDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINiyqrpripipypiqDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP
***TLLLPLLVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTN***********GPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAV****
******LPLLVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAV******YDIPSNILVCGKA*G***
MARTLLLPLLVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQS*********ATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP
*ARTLLLPLLVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKA*****
iiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MARTLLLPLLVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query539 2.2.26 [Sep-21-2011]
P29162554 L-ascorbate oxidase homol N/A no 0.981 0.954 0.512 1e-166
Q00624555 L-ascorbate oxidase homol N/A no 0.938 0.911 0.552 1e-163
Q9SU40587 Monocopper oxidase-like p no no 0.972 0.892 0.500 1e-150
Q9FHN6592 Monocopper oxidase-like p no no 0.942 0.858 0.497 1e-146
Q8VXX5589 Monocopper oxidase-like p no no 0.972 0.889 0.497 1e-143
P24792579 L-ascorbate oxidase OS=Cu N/A no 0.910 0.848 0.286 3e-53
P14133587 L-ascorbate oxidase OS=Cu N/A no 0.933 0.856 0.288 2e-52
P37064552 L-ascorbate oxidase OS=Cu N/A no 0.888 0.867 0.289 3e-52
Q0IQU1564 Laccase-22 OS=Oryza sativ no no 0.899 0.859 0.282 1e-44
Q40588578 L-ascorbate oxidase OS=Ni N/A no 0.888 0.828 0.271 2e-44
>sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function desciption
 Score =  586 bits (1511), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 281/548 (51%), Positives = 383/548 (69%), Gaps = 19/548 (3%)

Query: 2   ARTLLLPLLVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPR 61
            +   + LL+C     LSV ++ A+DPY ++ W VT GT++PLGVPQ+ ILINGQFPGPR
Sbjct: 4   GKVTFVALLLC-----LSVGVI-AEDPYLYFNWNVTYGTIAPLGVPQQGILINGQFPGPR 57

Query: 62  LDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKD 121
           ++  +N+NI++NV N LD+PFL TWNG++ RKNSWQDG  GT CPI P  N+TY+FQ KD
Sbjct: 58  INCTSNNNIVVNVFNNLDEPFLFTWNGVQHRKNSWQDGTPGTMCPIMPGQNFTYRFQVKD 117

Query: 122 QIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQT 181
           QIGSY YFP+T +HRAAGGYG +N++ R  IP+P+     ++ + +GDW+   HK L++ 
Sbjct: 118 QIGSYSYFPTTALHRAAGGYGALNVHSRALIPVPFDNPADEYNVFVGDWYNKGHKTLKKI 177

Query: 182 LDSGKSLPFPDGVLINGQGHTT-------FNGDQGKTYMFRISNVGLSTSFNFRIQGHTM 234
           LD G+++  PDG++ING+           F  + GKTY +R  N+G+ +S N R QGH M
Sbjct: 178 LDGGRTIGRPDGIIINGKSAKVGEAKEPLFTMEAGKTYRYRFCNLGMRSSVNIRFQGHPM 237

Query: 235 KLVEVEGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHY 294
           KLVE+EGSHT+QNIYDSLD+HVGQ +SVLVT +Q PKDYY+V S+RF K  L++ AI+ Y
Sbjct: 238 KLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPKDYYLVVSSRFLKQALSSVAIIRY 297

Query: 295 TNSHSPASGPLPTGP---TYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTI 351
            N   PAS  LPT P   T  I WSM Q R+FRWNLTA+AARPNPQGS+HYG+IN TRTI
Sbjct: 298 ANGKGPASPELPTPPPENTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRTI 357

Query: 352 VLANSAPLINGKLRYAVNGISYVNSDTPLKLADYF---NIPGIFSVNSIQSVPSGGASSV 408
            + NS   + GKLRY +NGIS+ N +TPLKL +YF   N    + + + ++       ++
Sbjct: 358 KIFNSMSQVGGKLRYGLNGISHTNGETPLKLVEYFGATNKAFKYDLMADEAPADPSKLTI 417

Query: 409 ATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTR 468
           AT+V       ++E++F+N+EKT++++HLDGY F+ V    G+W+ EKR+ YNL D L+R
Sbjct: 418 ATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGRWSPEKRKNYNLVDGLSR 477

Query: 469 HTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNI 528
           +  QVYP SW  I+++ DN GMWN+RS +WE+ YLG+Q Y  V +   SL +EY+IP N 
Sbjct: 478 NNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPDNH 537

Query: 529 LVCGKAVG 536
            +CG   G
Sbjct: 538 PLCGIVKG 545
Probable oxidoreductase that may be involved in pollen tube growth.
Nicotiana tabacum (taxid: 4097)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: -
>sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 Back     alignment and function description
>sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 Back     alignment and function description
>sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 Back     alignment and function description
>sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 Back     alignment and function description
>sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 Back     alignment and function description
>sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1 Back     alignment and function description
>sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 Back     alignment and function description
>sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 Back     alignment and function description
>sp|Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query539
255562663539 multicopper oxidase, putative [Ricinus c 0.998 0.998 0.812 0.0
225468506536 PREDICTED: L-ascorbate oxidase homolog [ 0.994 1.0 0.790 0.0
224094448538 multicopper oxidase [Populus trichocarpa 0.996 0.998 0.793 0.0
297735840535 unnamed protein product [Vitis vinifera] 0.990 0.998 0.791 0.0
449448348537 PREDICTED: L-ascorbate oxidase homolog [ 0.981 0.985 0.795 0.0
147795424592 hypothetical protein VITISV_028749 [Viti 0.990 0.902 0.765 0.0
356496848540 PREDICTED: L-ascorbate oxidase homolog [ 0.998 0.996 0.778 0.0
444436455517 SKU5-like protein, partial [Eucalyptus c 0.959 1.0 0.800 0.0
356537710537 PREDICTED: L-ascorbate oxidase homolog [ 0.992 0.996 0.772 0.0
356563668541 PREDICTED: L-ascorbate oxidase homolog [ 0.961 0.957 0.780 0.0
>gi|255562663|ref|XP_002522337.1| multicopper oxidase, putative [Ricinus communis] gi|223538415|gb|EEF40021.1| multicopper oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  929 bits (2400), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/538 (81%), Positives = 485/538 (90%)

Query: 1   MARTLLLPLLVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGP 60
           M + + L LL  V     +V+LV ADDPYR+YTWTVT GT+SPLG PQ+VILINGQFPGP
Sbjct: 1   MEKAVFLHLLFAVFAVLGTVSLVNADDPYRYYTWTVTDGTISPLGSPQQVILINGQFPGP 60

Query: 61  RLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTK 120
           RLDVVTNDNIILN+INKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYK QTK
Sbjct: 61  RLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKLQTK 120

Query: 121 DQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQ 180
           DQIGS+ YFPSTL+HRAAGGYGG+N+Y+RPRIPIP+P  DGDFTLL+GDW+KT+HK L+ 
Sbjct: 121 DQIGSFTYFPSTLLHRAAGGYGGLNVYERPRIPIPFPNPDGDFTLLVGDWYKTDHKTLQA 180

Query: 181 TLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVE 240
           +LDSG SLPFPDGVLINGQ HTTF+GDQGKTYM RISNVGLSTS NFRIQGH MKLVEVE
Sbjct: 181 SLDSGNSLPFPDGVLINGQTHTTFSGDQGKTYMLRISNVGLSTSLNFRIQGHKMKLVEVE 240

Query: 241 GSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSP 300
           GSHTIQNIYDSLDVHVGQSV+VLVTL+QPPKDYYIVASTRFT+ VLTATA+LHY+NS +P
Sbjct: 241 GSHTIQNIYDSLDVHVGQSVAVLVTLDQPPKDYYIVASTRFTRQVLTATAVLHYSNSQTP 300

Query: 301 ASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLI 360
           ASGPLP  P+   HWSM+QART+RWNLTA+AARPNPQGSFHYGKI  T+TIVLANSAPLI
Sbjct: 301 ASGPLPAPPSGLFHWSMQQARTYRWNLTASAARPNPQGSFHYGKIIPTKTIVLANSAPLI 360

Query: 361 NGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEY 420
           NGK RYAVN +SYVN+DTPLKLADYFNIPG+FSV+SIQS+PS G + VATSV+  +LH++
Sbjct: 361 NGKRRYAVNRVSYVNADTPLKLADYFNIPGVFSVDSIQSLPSDGPAYVATSVLPTSLHDF 420

Query: 421 IEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTV 480
           +EVVFQNNE TMQSWHLDGYDFWVVGYG+GQWA  KRRTYNL D LTRHTAQVYP++WT 
Sbjct: 421 VEVVFQNNEYTMQSWHLDGYDFWVVGYGAGQWAPNKRRTYNLVDALTRHTAQVYPKAWTA 480

Query: 481 ILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHH 538
           ILVSLDNQGMWNMRSAIWERQYLGQQ YL+VW  VHSLANEYDIP N L+CGKA+G H
Sbjct: 481 ILVSLDNQGMWNMRSAIWERQYLGQQLYLRVWTQVHSLANEYDIPCNALLCGKAIGRH 538

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225468506|ref|XP_002270831.1| PREDICTED: L-ascorbate oxidase homolog [Vitis vinifera] Back     alignment and taxonomy information
>gi|224094448|ref|XP_002310162.1| multicopper oxidase [Populus trichocarpa] gi|222853065|gb|EEE90612.1| multicopper oxidase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297735840|emb|CBI18560.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449448348|ref|XP_004141928.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] gi|449485452|ref|XP_004157172.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|147795424|emb|CAN72538.1| hypothetical protein VITISV_028749 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356496848|ref|XP_003517277.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] Back     alignment and taxonomy information
>gi|444436455|gb|AGE09595.1| SKU5-like protein, partial [Eucalyptus cladocalyx] Back     alignment and taxonomy information
>gi|356537710|ref|XP_003537368.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] Back     alignment and taxonomy information
>gi|356563668|ref|XP_003550083.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query539
TAIR|locus:2174954546 sks17 "SKU5 similar 17" [Arabi 0.951 0.939 0.740 5.2e-216
TAIR|locus:2046763541 sks16 "SKU5 similar 16" [Arabi 0.949 0.946 0.656 9.1e-187
TAIR|locus:2115154541 sks15 "SKU5 similar 15" [Arabi 0.944 0.940 0.639 2.8e-185
TAIR|locus:2120648541 sks4 "SKU5 similar 4" [Arabido 0.951 0.948 0.618 1e-178
TAIR|locus:2199798541 sks5 "SKU5 similar 5" [Arabido 0.948 0.944 0.597 3.8e-172
TAIR|locus:2201133538 sks7 "SKU5 similar 7" [Arabido 0.949 0.951 0.589 1.7e-169
TAIR|locus:2036911551 sks8 "SKU5 similar 8" [Arabido 0.949 0.929 0.587 4.5e-169
TAIR|locus:2033513542 SKS6 "SKU5-similar 6" [Arabido 0.951 0.946 0.571 5.2e-168
TAIR|locus:2121823549 sks9 "SKU5 similar 9" [Arabido 0.951 0.934 0.570 8.7e-166
TAIR|locus:2092865551 sks13 "SKU5 similar 13" [Arabi 0.944 0.923 0.542 8.9e-157
TAIR|locus:2174954 sks17 "SKU5 similar 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2087 (739.7 bits), Expect = 5.2e-216, P = 5.2e-216
 Identities = 380/513 (74%), Positives = 433/513 (84%)

Query:    26 DDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT 85
             + PY+FYTWTVT G +SPLGVPQ+VILINGQFPGP+L+VVTNDNIILN+INKLDQPFLLT
Sbjct:    33 ESPYKFYTWTVTYGIISPLGVPQQVILINGQFPGPKLEVVTNDNIILNLINKLDQPFLLT 92

Query:    86 WNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGIN 145
             WNGIKQRKNSWQDGVLGTNCPI PNSN+TYKFQTKDQIG++ YFPST  H+AAGG+G IN
Sbjct:    93 WNGIKQRKNSWQDGVLGTNCPIQPNSNFTYKFQTKDQIGTFNYFPSTAFHKAAGGFGAIN 152

Query:   146 XXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFN 205
                             DFTLL+GDWFKTNHK L+Q LDSG  LPFPDG+LINGQ  +TF+
Sbjct:   153 VYARPGIPIPYPLPTADFTLLVGDWFKTNHKTLQQRLDSGGVLPFPDGMLINGQTQSTFS 212

Query:   206 GDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVSVLVT 265
             GDQGKTYM RISNVGLS++FNFRIQGHTMK+VEVEGSH IQ  YDSLD+HVGQS++VLVT
Sbjct:   213 GDQGKTYMLRISNVGLSSTFNFRIQGHTMKVVEVEGSHVIQTDYDSLDIHVGQSLAVLVT 272

Query:   266 LNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRW 325
             LNQ PKDYYIVASTRF ++ L+   +L Y+NS  PASG  P  P  E+ WSM+QARTFRW
Sbjct:   273 LNQSPKDYYIVASTRFIRSKLSVMGLLRYSNSRVPASGDPPALPPGELVWSMRQARTFRW 332

Query:   326 NLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADY 385
             NLTANAARPNPQGSFHYG I+ T+T V +NSAPLINGK RYAVNG+SYV S+TPLKLAD+
Sbjct:   333 NLTANAARPNPQGSFHYGMISPTKTFVFSNSAPLINGKQRYAVNGVSYVKSETPLKLADH 392

Query:   386 FNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYIEVVFQNNEKTMQSWHLDGYDFWVV 445
             F I G+FS N+IQSVPS    +VATSV+Q + H+++E+VFQNNEK+MQSWHLDGYDFWVV
Sbjct:   393 FGISGVFSTNAIQSVPSNSPPTVATSVVQTSHHDFLEIVFQNNEKSMQSWHLDGYDFWVV 452

Query:   446 GYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQ 505
             G+GSGQW   KR  +NL D LTRHT QVYP+SWT ILVSLDNQGMWNMRSAIWERQY GQ
Sbjct:   453 GFGSGQWTPAKRSLHNLVDALTRHTTQVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQ 512

Query:   506 QFYLKVWNAVHSLANEYDIPSNILVCGKAVGHH 538
             QFYLKVWN+V SLANEY+ P N+ +CGKAVG H
Sbjct:   513 QFYLKVWNSVQSLANEYNPPDNLQLCGKAVGRH 545
GO:0005507 "copper ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0080167 "response to karrikin" evidence=IEP
TAIR|locus:2046763 sks16 "SKU5 similar 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115154 sks15 "SKU5 similar 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120648 sks4 "SKU5 similar 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199798 sks5 "SKU5 similar 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201133 sks7 "SKU5 similar 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036911 sks8 "SKU5 similar 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033513 SKS6 "SKU5-similar 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121823 sks9 "SKU5 similar 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092865 sks13 "SKU5 similar 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P29162ASOL_TOBAC1, ., 1, 0, ., 3, ., -0.51270.98140.9548N/Ano
Q00624ASOL_BRANA1, ., 1, 0, ., 3, ., -0.55210.93870.9117N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.10.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query539
PLN02835539 PLN02835, PLN02835, oxidoreductase 0.0
PLN02354552 PLN02354, PLN02354, copper ion binding / oxidoredu 0.0
PLN02991543 PLN02991, PLN02991, oxidoreductase 0.0
PLN02792536 PLN02792, PLN02792, oxidoreductase 0.0
PLN02168545 PLN02168, PLN02168, copper ion binding / pectinest 0.0
PLN00044596 PLN00044, PLN00044, multi-copper oxidase-related p 0.0
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 9e-72
PLN02191574 PLN02191, PLN02191, L-ascorbate oxidase 2e-63
PLN02604566 PLN02604, PLN02604, oxidoreductase 3e-63
TIGR03389539 TIGR03389, laccase, laccase, plant 6e-62
pfam00394146 pfam00394, Cu-oxidase, Multicopper oxidase 3e-47
pfam07732119 pfam07732, Cu-oxidase_3, Multicopper oxidase 4e-44
pfam07731135 pfam07731, Cu-oxidase_2, Multicopper oxidase 2e-30
TIGR03390538 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu 2e-27
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 4e-20
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 2e-12
>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase Back     alignment and domain information 
 Score = 1012 bits (2619), Expect = 0.0
 Identities = 443/539 (82%), Positives = 491/539 (91%)

Query: 1   MARTLLLPLLVCVVLAALSVALVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGP 60
           M   + L LL+ V+    SV+LV  +DPY++YTWTVT GT+SPLGVPQ+VILINGQFPGP
Sbjct: 1   MGSAVNLHLLLGVLAVLSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGP 60

Query: 61  RLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTK 120
           RLDVVTNDNIILN+INKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTK
Sbjct: 61  RLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTK 120

Query: 121 DQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQ 180
           DQIG++ YFPSTL H+AAGG+G IN+Y+RPRIPIP+P+ DGDFTLL+GDW+KT+HK L+Q
Sbjct: 121 DQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQ 180

Query: 181 TLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVE 240
            LDSGK LPFPDGVLINGQ  +TF+GDQGKTYMFRISNVGLSTS NFRIQGHTMKLVEVE
Sbjct: 181 RLDSGKVLPFPDGVLINGQTQSTFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVE 240

Query: 241 GSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSP 300
           GSHTIQNIYDSLDVHVGQSV+VLVTLNQ PKDYYIVASTRFT+ +LTATA+LHY+NS +P
Sbjct: 241 GSHTIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTP 300

Query: 301 ASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLI 360
           ASGPLP  P+ E+HWSM+QART+RWNLTA+AARPNPQGSFHYGKI  T+TIVLANSAPLI
Sbjct: 301 ASGPLPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLI 360

Query: 361 NGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEY 420
           NGK RYAVNG+SYVNSDTPLKLADYF IPG+FSVNSIQS+PSGG + VATSVMQ +LH++
Sbjct: 361 NGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDF 420

Query: 421 IEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTV 480
           +EVVFQNNEKTMQSWHLDGYDFWVVGYGSGQW   KR  YNL D LTRHTAQVYP+SWT 
Sbjct: 421 LEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTT 480

Query: 481 ILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP 539
           ILVSLDNQGMWNMRSAIWERQYLGQQFYL+VWN VHSLANEYDIP N L+CGKA+G HP
Sbjct: 481 ILVSLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIGRHP 539

Length = 539
>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase Back     alignment and domain information
>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase Back     alignment and domain information
>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase Back     alignment and domain information
>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase Back     alignment and domain information
>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|234194 TIGR03389, laccase, laccase, plant Back     alignment and domain information
>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 539
PLN02835539 oxidoreductase 100.0
PLN02991543 oxidoreductase 100.0
PLN02354552 copper ion binding / oxidoreductase 100.0
PLN02792536 oxidoreductase 100.0
PLN00044596 multi-copper oxidase-related protein; Provisional 100.0
PLN02168545 copper ion binding / pectinesterase 100.0
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 100.0
TIGR03389539 laccase laccase, plant. Members of this protein fa 100.0
PLN02191574 L-ascorbate oxidase 100.0
PLN02604566 oxidoreductase 100.0
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 100.0
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 100.0
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 100.0
PRK10965523 multicopper oxidase; Provisional 100.0
PRK10883471 FtsI repressor; Provisional 100.0
COG2132451 SufI Putative multicopper oxidases [Secondary meta 100.0
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 100.0
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 100.0
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 99.96
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 99.93
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 99.75
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.71
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 99.65
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 99.52
PRK10965523 multicopper oxidase; Provisional 99.48
TIGR03389539 laccase laccase, plant. Members of this protein fa 99.43
PLN02835539 oxidoreductase 99.43
PRK10883471 FtsI repressor; Provisional 99.37
PLN02354552 copper ion binding / oxidoreductase 99.25
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 99.23
PLN02604566 oxidoreductase 99.23
PLN02168545 copper ion binding / pectinesterase 99.2
COG2132451 SufI Putative multicopper oxidases [Secondary meta 99.2
PLN02991543 oxidoreductase 99.18
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 99.17
PLN02792536 oxidoreductase 99.15
PLN02191574 L-ascorbate oxidase 99.03
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 98.94
PLN00044 596 multi-copper oxidase-related protein; Provisional 98.87
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 98.78
PRK02710119 plastocyanin; Provisional 98.68
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 98.52
KOG1263 563 consensus Multicopper oxidases [Secondary metaboli 98.47
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 98.33
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 98.16
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 98.1
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 98.05
PRK02888635 nitrous-oxide reductase; Validated 98.04
TIGR0265783 amicyanin amicyanin. Members of this family are am 98.02
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 97.87
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 97.85
COG3794128 PetE Plastocyanin [Energy production and conversio 97.63
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 97.62
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 97.61
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 97.59
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 97.24
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 96.99
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 96.95
PRK02710119 plastocyanin; Provisional 95.97
PRK02888635 nitrous-oxide reductase; Validated 95.89
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 95.56
TIGR0265783 amicyanin amicyanin. Members of this family are am 95.55
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 94.77
PRK10378375 inactive ferrous ion transporter periplasmic prote 94.06
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 93.79
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 93.52
COG4454158 Uncharacterized copper-binding protein [Inorganic 93.31
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 92.99
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 92.93
COG4454158 Uncharacterized copper-binding protein [Inorganic 92.86
COG3794128 PetE Plastocyanin [Energy production and conversio 92.15
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 90.7
COG1622247 CyoA Heme/copper-type cytochrome/quinol oxidases, 89.73
COG1622247 CyoA Heme/copper-type cytochrome/quinol oxidases, 89.05
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 87.4
COG4263637 NosZ Nitrous oxide reductase [Energy production an 85.56
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 84.39
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 82.0
>PLN02835 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=1.5e-109  Score=882.68  Aligned_cols=518  Identities=84%  Similarity=1.402  Sum_probs=427.8

Q ss_pred             hcccCCCeEEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCCCCceeeeCCcCCCCCCCCCCCc
Q 009242           22 LVKADDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGVL  101 (539)
Q Consensus        22 ~~~~~~~~~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~~~~~iH~HG~~~~~~~~~DG~~  101 (539)
                      +..+.+++++|+|+|++..+++||+++++|+|||++|||+||+++||+|+|+|+|+|+++++|||||++|..++++||++
T Consensus        22 ~~~~~~~~~~y~~~v~~~~~~~dg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~L~~~ttiHWHGl~~~~~~~~DGv~  101 (539)
T PLN02835         22 LVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVL  101 (539)
T ss_pred             hhhccCcEEEEEEEEEEEEeccCCeEEEEEEECCcCCCCCEEEECCCEEEEEEEeCCCCCCcEEeCCcccCCCCCCCCCc
Confidence            45566789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHHHHhh
Q 009242          102 GTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQT  181 (539)
Q Consensus       102 ~~~~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~  181 (539)
                      +.||+|.||++|+|+|++++++||||||||...|+.+||+|+|||++++.++.++...|+|++++++||+++....+...
T Consensus       102 ~tQ~pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~  181 (539)
T PLN02835        102 GTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQR  181 (539)
T ss_pred             cCcCCCCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCCCCCCceEEEEeeccccCCHHHHHHH
Confidence            88999999999999999867899999999999999999999999987655556666679999999999999987666555


Q ss_pred             hcCCCCCCCCceEEECCCCCceEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEEEecCccccceeeceEEEcCCceEE
Q 009242          182 LDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVS  261 (539)
Q Consensus       182 ~~~~~~~~~~~~~liNG~~~~~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~l~l~pg~R~d  261 (539)
                      +..+...+.++.+||||+..+.++|++|++|||||||+|....+.|+|+||+|+||++||.+++|..+|+|.|++|||||
T Consensus       182 ~~~g~~~~~~d~~liNG~~~~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~v~p~~~~~l~i~~GqRyd  261 (539)
T PLN02835        182 LDSGKVLPFPDGVLINGQTQSTFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVA  261 (539)
T ss_pred             hhcCCCCCCCceEEEccccCceEEECCCCEEEEEEEEcCCCccEEEEECCCEEEEEEECCccCCCceeeEEEECcCceEE
Confidence            55666667789999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCcceEEEEeeecccCccceEEEEEecCCCCCCCCCCCCCCCcccccccccccccccccccCCCCCCCCCCcc
Q 009242          262 VLVTLNQPPKDYYIVASTRFTKNVLTATAILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFH  341 (539)
Q Consensus       262 v~v~~~~~~g~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~l~~~l~~~~~~p~p~~~~~  341 (539)
                      |+|++++++|+|+|++...+........|||+|.++..+.+.++|..|..+...+...+......+.+....+.+.....
T Consensus       262 vlv~~~~~~g~y~i~a~~~~~~~~~~~~ail~Y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~  341 (539)
T PLN02835        262 VLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQARTYRWNLTASAARPNPQGSFH  341 (539)
T ss_pred             EEEEcCCCCCcEEEEEEccccCCCcceEEEEEECCCCCCCCCCCCCCCccccccccchhhccccccCccccCCCCCcccc
Confidence            99999988899999986544334567899999988643332233432321111122222222222333233333322221


Q ss_pred             ccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCCCCCCCCCCcceeEEEecCCcEE
Q 009242          342 YGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSVPSGGASSVATSVMQVNLHEYI  421 (539)
Q Consensus       342 ~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~v  421 (539)
                      ......++++.+.......++...|+|||++|..|+.|+|++.+.+.++.++.......+.+...+.++.++.++.|++|
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~g~~~w~iN~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~V  421 (539)
T PLN02835        342 YGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGGPAFVATSVMQTSLHDFL  421 (539)
T ss_pred             ccccCCCceEEEeccccccCCeEEEEECCcccCCCCCChhhhhhhcCCCccccCccccCCCCCccccCCeEEEcCCCCEE
Confidence            22223455555543222235667899999999999999988766666666664433333333334567889999999999


Q ss_pred             EEEEEcCCCCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEEeechhhh
Q 009242          422 EVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQ  501 (539)
Q Consensus       422 e~~i~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~  501 (539)
                      ||+|+|.+...||||||||+||||++|.|.|++.....+|+.+|++|||+.||++||++|||+|||||.|+|||||++|+
T Consensus       422 eivi~N~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP~~RDTv~vp~~gw~~IrF~aDNPG~Wl~HCHi~~H~  501 (539)
T PLN02835        422 EVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQ  501 (539)
T ss_pred             EEEEECCCCCCCCCCCCCccEEEEeccCCCCCcccccccCCCCCCccceEEeCCCCEEEEEEECcCCEEeeeeecchhhh
Confidence            99999998889999999999999999999998655556889999999999999999999999999999999999999999


Q ss_pred             hcccEEEEEEecCcccCcccCCCCCccccccccCCCCC
Q 009242          502 YLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAVGHHP  539 (539)
Q Consensus       502 d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~~~~~  539 (539)
                      ..||+.+|+|.++.+..+..++||++++.||.-++.+|
T Consensus       502 ~~Gm~~~~~V~~~~~~~~~~~~~P~~~~~Cg~~~~~~~  539 (539)
T PLN02835        502 YLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIGRHP  539 (539)
T ss_pred             hcccEEEEEEccCCCccccccCCCccccccccCccCCC
Confidence            99999999999987777678899999999999888776

>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] Back     alignment and domain information
>COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>COG4263 NosZ Nitrous oxide reductase [Energy production and conversion] Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query539
1aoz_A552 Refined Crystal Structure Of Ascorbate Oxidase At 1 2e-52
1hfu_A503 Type-2 Cu-Depleted Laccase From Coprinus Cinereus A 2e-27
1a65_A504 Type-2 Cu-depleted Laccase From Coprinus Cinereus L 3e-27
4a2f_A497 Coriolopsis Gallica Laccase Collected At 12.65 Kev 3e-23
4a2d_A496 Coriolopsis Gallica Laccase T2 Copper Depleted At P 3e-23
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 1e-22
2xyb_A497 Crystal Structure Of A Fully Functional Laccase Fro 3e-22
2hrg_A496 Crystal Structure Of Blue Laccase From Trametes Tro 3e-22
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 1e-21
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 2e-21
3fpx_A499 Native Fungus Laccase From Trametes Hirsuta Length 2e-21
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 7e-21
1gyc_A499 Crystal Structure Determination At Room Temperature 1e-20
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 3e-20
2qt6_A498 Crystal Structure Determination Of A Blue Laccase F 2e-19
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 6e-18
1zpu_A534 Crystal Structure Of Fet3p, A Multicopper Oxidase T 8e-18
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 8e-18
3t6v_A495 Crystal Structure Of Laccase From Steccherinum Ochr 3e-17
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 3e-16
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 2e-14
1gw0_A559 Crystal Structure Of Laccase From Melanocarpus Albo 2e-14
3dkh_A559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 3e-14
2q9o_A559 Near-Atomic Resolution Structure Of A Melanocarpus 3e-14
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 5e-14
2xu9_A439 Crystal Structure Of Laccase From Thermus Thermophi 1e-07
3zx1_A481 Multicopper Oxidase From Campylobacter Jejuni: A Me 4e-06
3g5w_A318 Crystal Structure Of Blue Copper Oxidase From Nitro 7e-06
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  203 bits (516), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 248/558 (44%), Gaps = 77/558 (13%)
Query: 30  RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLD-QPFLLTWNG 88
           R Y W V     +P      V+ INGQFPGP +     D++++ + NKL  +  ++ W+G
Sbjct: 4   RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 89  IKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXX 147
           I QR   W DG    + C I P   + Y F T D  G++FY     M R+AG YG +   
Sbjct: 64  ILQRGTPWADGTASISQCAINPGETFFYNF-TVDNPGTFFYHGHLGMQRSAGLYGSL-IV 121
Query: 148 XXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPF-----PDGVLINGQGH- 201
                       DG+  LL+ DW+   H+ + +      S P      P  +L+NG+G  
Sbjct: 122 DPPQGKKEPFHYDGEINLLLSDWW---HQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQF 178
Query: 202 -------------------------TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKL 236
                                      F+    KTY  RI++     + NF I  H + +
Sbjct: 179 DCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238
Query: 237 VEVEGSHTIQNIYDS-LDVHVGQSVSVLVTLNQ-PPKDYYIVASTRF----TKNVLTATA 290
           VE +G++ +Q  Y S +D++ G+S SVL+T +Q P ++Y++   TR     T   LT   
Sbjct: 239 VEADGNY-VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLN 297
Query: 291 ILHYTNSHSPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRT 350
            L  + S  P S P P  P ++      +++ F + +TA    P P   F+       R 
Sbjct: 298 YLPNSVSKLPTSPP-PQTPAWD---DFDRSKNFTYRITAAMGSPKPPVKFN-------RR 346
Query: 351 IVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVN----------SIQSV 400
           I L N+  +ING +++A+N +S     TP   A  +N+   F  N           I + 
Sbjct: 347 IFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTP 406
Query: 401 PSGGASSVATSVMQVNLHEYIEVVFQN------NEKTMQSWHLDGYDFWVVGYGSGQWAA 454
           P+   + +   V Q  + E ++V+ QN      N      WHL G+DFWV+GYG G+++A
Sbjct: 407 PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA 466
Query: 455 EKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNA 514
           E+  + NL +   R+T  ++P  WT I    DN G+W     I    ++G          
Sbjct: 467 EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFA--EG 524
Query: 515 VHSLANEYDIPSNILVCG 532
           V  +     IP+  L CG
Sbjct: 525 VEKVGR---IPTKALACG 539
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 Back     alignment and structure
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 Back     alignment and structure
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 Back     alignment and structure
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 Back     alignment and structure
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 Back     alignment and structure
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 Back     alignment and structure
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query539
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 0.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 8e-98
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 2e-91
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 1e-90
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 2e-89
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 2e-88
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 1e-84
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 2e-77
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 2e-54
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 9e-53
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 2e-42
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 2e-32
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 5e-29
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 4e-28
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 1e-26
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 2e-26
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 9e-25
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 7e-21
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 5e-20
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 1e-19
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 5e-19
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-17
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 2e-09
2zoo_A442 Probable nitrite reductase; electron transfer, ele 7e-19
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 9e-19
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 4e-18
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 3e-16
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 1e-15
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 3e-04
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 6e-13
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 3e-12
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 4e-10
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 1e-08
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 5e-08
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 2e-04
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 Back     alignment and structure
 Score =  544 bits (1405), Expect = 0.0
 Identities = 149/558 (26%), Positives = 241/558 (43%), Gaps = 67/558 (12%)

Query: 30  RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNG 88
           R Y W V     +P      V+ INGQFPGP +     D++++ + NKL  +  ++ W+G
Sbjct: 4   RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63

Query: 89  IKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIY 147
           I QR   W DG    + C I P   + Y F   D  G++FY     M R+AG YG + + 
Sbjct: 64  ILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122

Query: 148 QRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSG--KSLPFPDGVLINGQG----- 200
                  P+   DG+  LL+ DW+  +       L S   + +  P  +L+NG+G     
Sbjct: 123 PPQGKKEPFHY-DGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181

Query: 201 ---------------------HTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEV 239
                                   F+    KTY  RI++     + NF I  H + +VE 
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241

Query: 240 EGSHTIQNIYDSLDVHVGQSVSVLVTLNQPPKD-YYIVASTRFTK-NVLTATAILHYTNS 297
           +G++        +D++ G+S SVL+T +Q P + Y++   TR    N      +L+Y  +
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPN 301

Query: 298 H--SPASGPLPTGPTYEIHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLAN 355
                 + P P  P ++      +++ F + +TA    P P        +   R I L N
Sbjct: 302 SVSKLPTSPPPQTPAWD---DFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFLLN 351

Query: 356 SAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNS----------IQSVPSGGA 405
           +  +ING +++A+N +S     TP   A  +N+   F  N           I + P+   
Sbjct: 352 TQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEK 411

Query: 406 SSVATSVMQVNLHEYIEVVFQN------NEKTMQSWHLDGYDFWVVGYGSGQWAAEKRRT 459
           + +   V Q  + E ++V+ QN      N      WHL G+DFWV+GYG G+++AE+  +
Sbjct: 412 TRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESS 471

Query: 460 YNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLA 519
            NL +   R+T  ++P  WT I    DN G+W     I    ++G             + 
Sbjct: 472 LNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAE-----GVE 526

Query: 520 NEYDIPSNILVCGKAVGH 537
               IP+  L CG     
Sbjct: 527 KVGRIPTKALACGGTAKS 544
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query539
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 100.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 100.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 100.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 100.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 100.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 100.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 100.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 100.0
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 100.0
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 100.0
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 100.0
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 100.0
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 100.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 100.0
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 100.0
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 100.0
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 100.0
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 100.0
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 100.0
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 100.0
2zoo_A442 Probable nitrite reductase; electron transfer, ele 100.0
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 100.0
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 100.0
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 100.0
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 100.0
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 100.0
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 100.0
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 100.0
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.97
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.96
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.96
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.95
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.95
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.9
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.89
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 99.89
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.88
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.86
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.85
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 99.83
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.82
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 99.75
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 99.75
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 99.7
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 99.7
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 99.64
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 99.64
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 99.61
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 99.61
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.6
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 99.6
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 99.58
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.57
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 99.56
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 99.54
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 99.51
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 99.46
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 99.46
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 99.46
2cal_A154 Rusticyanin; iron respiratory electron transport c 99.42
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.41
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 99.39
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 99.3
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 99.27
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 99.25
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.18
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 99.18
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 99.12
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 98.99
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.92
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.88
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.85
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.8
3c75_A132 Amicyanin; copper proteins, electron transfer comp 98.75
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.75
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.74
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.71
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.69
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.68
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.65
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.64
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 98.61
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.59
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.59
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.58
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 98.57
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 98.51
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 98.5
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.48
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.41
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.4
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 98.38
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 98.34
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 98.32
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 98.29
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 98.27
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.26
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 98.18
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 98.14
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 98.12
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 98.12
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.08
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 98.06
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 98.05
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 98.0
2cal_A154 Rusticyanin; iron respiratory electron transport c 97.93
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 97.93
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 97.4
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 97.26
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 97.25
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 97.24
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 97.2
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 97.15
3c75_A132 Amicyanin; copper proteins, electron transfer comp 97.13
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 96.89
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 96.59
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 96.54
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 96.37
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 96.36
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 96.04
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 95.89
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 95.62
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 95.26
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 94.98
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 94.87
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 94.35
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 94.0
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 91.15
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 85.29
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
Probab=100.00  E-value=5.6e-99  Score=816.64  Aligned_cols=490  Identities=30%  Similarity=0.554  Sum_probs=395.0

Q ss_pred             CeEEEEEEEEEEeecCCCeeeEEEEECCCCCCceEEEEcCCEEEEEEEECCC-CCceeeeCCcCCCCCCCCCCCccc-CC
Q 009242           28 PYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLD-QPFLLTWNGIKQRKNSWQDGVLGT-NC  105 (539)
Q Consensus        28 ~~~~~~l~~~~~~~~~~G~~~~~~~~nG~~pgP~i~v~~Gd~v~i~~~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~-~~  105 (539)
                      ++|+|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ ||
T Consensus         2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~   81 (552)
T 1aoz_A            2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC   81 (552)
T ss_dssp             CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred             eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence            6899999999999999999999999999999999999999999999999998 999999999999988999999999 99


Q ss_pred             ccCCCCeEEEEEEeCCCccceeEccCcchhhccceeeEEEEecCCCCCCCCCCCCCceeEEeeeecccchHHHHhhhcCC
Q 009242          106 PIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINIYQRPRIPIPYPIQDGDFTLLIGDWFKTNHKILRQTLDSG  185 (539)
Q Consensus       106 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~  185 (539)
                      +|.||++|+|+|++ +++||||||||...|+.+||+|+|||++++....+++ .|+|++|+++||+++....+...+...
T Consensus        82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~-~d~e~~l~l~Dw~~~~~~~~~~~~~~~  159 (552)
T 1aoz_A           82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSSK  159 (552)
T ss_dssp             CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSC-CSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred             CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCC-CCccceEEeecccCCCHHHHHhhhhcc
Confidence            99999999999997 7899999999999999999999999999865444553 368999999999998765544333221


Q ss_pred             --CCCCCCceEEECCCCCc--------------------------eEEEecCCEEEEEEEecCCCCeeeEEEeCCeeEEE
Q 009242          186 --KSLPFPDGVLINGQGHT--------------------------TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLV  237 (539)
Q Consensus       186 --~~~~~~~~~liNG~~~~--------------------------~l~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~vi  237 (539)
                        .....++.++|||+..+                          .++|++|++|||||||+|..+.+.|+|+||+|+||
T Consensus       160 ~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi  239 (552)
T 1aoz_A          160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV  239 (552)
T ss_dssp             SCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred             cccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence              12235789999999865                          79999999999999999999999999999999999


Q ss_pred             EecCccccceeeceEEEcCCceEEEEEEe-CCCCcceEEEEeeecc-cCccceEEEEEecCCCCC--CCCCCCCCCC-cc
Q 009242          238 EVEGSHTIQNIYDSLDVHVGQSVSVLVTL-NQPPKDYYIVASTRFT-KNVLTATAILHYTNSHSP--ASGPLPTGPT-YE  312 (539)
Q Consensus       238 a~DG~~~~p~~~d~l~l~pg~R~dv~v~~-~~~~g~~~~~~~~~~~-~~~~~~~ail~y~~~~~~--~~~~~p~~p~-~~  312 (539)
                      |+||.+++|+.++++.|+|||||||+|++ ++.+|+|+|++..... .......|+|+|.+....  +..+.|..|. .+
T Consensus       240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~  319 (552)
T 1aoz_A          240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDD  319 (552)
T ss_dssp             EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTC
T ss_pred             EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccc
Confidence            99999999999999999999999999999 4468999999987643 234567899999876531  1112222221 11


Q ss_pred             cccccccccccccccccCCCCCCCCCCccccccccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCcc
Q 009242          313 IHWSMKQARTFRWNLTANAARPNPQGSFHYGKINTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIF  392 (539)
Q Consensus       313 ~~~~~~~~~~l~~~l~~~~~~p~p~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~  392 (539)
                      .......  .++ .+....+.+.        ....++++.|.......++...|+|||++|..++.|+|.+.+++++++|
T Consensus       320 ~~~~~~~--~l~-~l~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~  388 (552)
T 1aoz_A          320 FDRSKNF--TYR-ITAAMGSPKP--------PVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAF  388 (552)
T ss_dssp             HHHHHHH--HTT-CCBCTTCCCC--------CSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSS
T ss_pred             ccccccc--ccc-ccccCCCCCC--------CCCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCcccc
Confidence            1110000  011 1110001111        1235677777654332345678999999999999999988776666665


Q ss_pred             ccCCCCC----------CCCCCCCCcceeEEEecCCcEEEEEEEcCCC------CCCceeecCCceEEEeeccCcCCccc
Q 009242          393 SVNSIQS----------VPSGGASSVATSVMQVNLHEYIEVVFQNNEK------TMQSWHLDGYDFWVVGYGSGQWAAEK  456 (539)
Q Consensus       393 ~~~~~~~----------~p~~~~~~~~~~~~~~~~g~~ve~~i~N~~~------~~HP~HlHG~~F~Vl~~~~g~~~~~~  456 (539)
                      +.+...+          .+.+...+.++.++.++.|++|||+|+|.+.      +.||||||||+||||+++.|.|++..
T Consensus       389 ~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~  468 (552)
T 1aoz_A          389 DQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE  468 (552)
T ss_dssp             CCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGG
T ss_pred             ccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCccc
Confidence            5332211          0112234567888999999999999999873      46999999999999999988888744


Q ss_pred             ccccCCCCCCcceEEEeCCCcEEEEEEEeCCceeeEEEeechhhhhcccEEEEEEecCcccCcccCCCCCccccccccC
Q 009242          457 RRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAV  535 (539)
Q Consensus       457 ~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~  535 (539)
                      ...+|+.+|.|||||.||++||++|||+|||||.|+|||||++|++.|||.+|.|...     .++++|++++.|+.++
T Consensus       469 ~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C~~~~  542 (552)
T 1aoz_A          469 ESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGTA  542 (552)
T ss_dssp             GGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHHH
T ss_pred             ccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhhhccC
Confidence            5678999999999999999999999999999999999999999999999999987543     2567899999999876
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 539
d1aoza3214 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C 1e-38
d1v10a2168 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus 2e-33
d1aoza2209 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C 2e-33
d1hfua2172 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr 2e-29
d1hfua1131 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin 4e-29
d1gyca2170 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, 5e-29
d2q9oa2181 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce 7e-29
d1gyca1130 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la 1e-28
d1v10a1136 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T 3e-25
d1aoza1129 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc 2e-24
d2q9oa1162 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces 1e-21
d1kv7a2165 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc 5e-17
d1kv7a1140 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch 2e-16
d1oe2a1159 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige 1e-15
d1kbva1151 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser 1e-14
d2bw4a1157 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige 6e-12
d1gska2174 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba 7e-12
d1gska1181 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci 1e-11
d2j5wa1192 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie 4e-11
d1sdda1180 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t 6e-11
d2q9oa3216 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce 8e-11
d1mzya1153 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba 5e-10
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 3e-09
d2j5wa4179 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap 5e-09
d2j5wa3207 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap 1e-08
d1hfua3200 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr 2e-08
d1v10a3190 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus 2e-08
d2j5wa2145 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap 1e-07
d2j5wa5149 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa 2e-07
d1gyca3199 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, 4e-06
d1sddb2139 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B 1e-05
d1kcwa2146 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap 2e-05
d1sdda2116 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos 3e-05
d1gska3154 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba 8e-04
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

 Score =  138 bits (348), Expect = 1e-38
 Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 21/205 (10%)

Query: 346 NTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQSV----- 400
              R I L N+  +ING +++A+N +S     TP   A  +N+   F  N    V     
Sbjct: 4   KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDY 63

Query: 401 -----PSGGASSVATSVMQVNLHEYIEVVFQ------NNEKTMQSWHLDGYDFWVVGYGS 449
                P+   + +   V Q  + E ++V+ Q       N      WHL G+DFWV+GYG 
Sbjct: 64  DIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 123

Query: 450 GQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQGMWNMRSAIWERQYLGQQFYL 509
           G+++AE+  + NL +   R+T  ++P  WT I    DN G+W     I    ++G     
Sbjct: 124 GKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF 183

Query: 510 KVWNAVHSLANEYDIPSNILVCGKA 534
                   +     IP+  L CG  
Sbjct: 184 AE-----GVEKVGRIPTKALACGGT 203
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query539
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 100.0
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 100.0
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.98
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.97
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.97
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.97
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.96
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.96
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.96
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.96
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.96
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.95
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.95
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.94
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.94
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.91
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.89
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.89
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.88
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 99.87
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.86
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.86
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.85
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.85
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.84
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.83
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.83
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.69
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.67
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.66
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.65
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.65
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.65
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.64
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 99.61
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 99.56
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.54
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.47
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.39
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.39
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.39
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.38
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.29
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.26
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.25
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.24
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.23
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 99.21
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.17
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.08
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.08
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.06
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 99.03
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 99.0
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.96
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 98.96
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 98.89
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.89
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.76
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.72
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 98.6
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 98.59
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 98.58
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.57
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 98.52
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.49
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.47
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.47
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 98.41
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 98.39
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 98.34
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 98.33
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 98.32
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.29
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.29
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 98.26
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 98.21
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 98.18
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 98.17
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 98.11
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.11
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 98.06
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 98.06
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 98.05
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 98.04
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 98.02
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 97.97
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 97.95
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.89
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 97.89
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 97.87
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.84
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 97.8
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 97.79
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 97.77
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.53
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.44
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 97.31
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 97.28
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 97.23
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 97.18
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 97.15
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 96.9
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 96.89
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 96.75
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 96.54
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 96.29
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 96.19
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 96.1
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 96.09
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 96.07
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 95.98
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 95.97
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 95.75
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 95.67
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 95.56
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 95.3
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 95.29
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 95.23
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 95.23
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 93.44
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 85.78
d3dtub1152 Cytochrome c oxidase {Rhodobacter sphaeroides [Tax 85.33
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 82.43
d3ehbb1145 Cytochrome c oxidase {Paracoccus denitrificans [Ta 81.32
d1v54b1137 Cytochrome c oxidase {Cow (Bos taurus) [TaxId: 991 81.06
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=100.00  E-value=1.4e-40  Score=310.45  Aligned_cols=185  Identities=30%  Similarity=0.568  Sum_probs=156.0

Q ss_pred             ccceEEEEcccccccCCeEEEEEcCeeecCCCCchhcccccCCCCccccCCCCC----------CCCCCCCCcceeEEEe
Q 009242          346 NTTRTIVLANSAPLINGKLRYAVNGISYVNSDTPLKLADYFNIPGIFSVNSIQS----------VPSGGASSVATSVMQV  415 (539)
Q Consensus       346 ~~~r~~~l~~~~~~~~~~~~~~iNg~~f~~p~~p~l~~~~~~~~~~~~~~~~~~----------~p~~~~~~~~~~~~~~  415 (539)
                      ..+|++.|..+....+|..+|+|||++|..|++|+|++.+++..+.++......          .+.+...+.++.++.+
T Consensus         4 ~~~~ti~l~~~~~~~ng~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v~~~   83 (214)
T d1aoza3           4 KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQF   83 (214)
T ss_dssp             SCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEE
T ss_pred             CCCeEEEEecCccccCCeEEEEECCEeccCCCcchHHHHhhccccccccCCCcccccccccccCCCCCcccccCceeEEe
Confidence            467888886655556788899999999999999999887776666555432211          1223456788999999


Q ss_pred             cCCcEEEEEEEcCC------CCCCceeecCCceEEEeeccCcCCcccccccCCCCCCcceEEEeCCCcEEEEEEEeCCce
Q 009242          416 NLHEYIEVVFQNNE------KTMQSWHLDGYDFWVVGYGSGQWAAEKRRTYNLADTLTRHTAQVYPQSWTVILVSLDNQG  489 (539)
Q Consensus       416 ~~g~~ve~~i~N~~------~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~adnpG  489 (539)
                      +.|++|||+|+|.+      ...||||||||+||||+++.|.++......+++.+|.+|||+.|++++|++|||+|||||
T Consensus        84 ~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~adnpG  163 (214)
T d1aoza3          84 KIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPG  163 (214)
T ss_dssp             CTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCE
T ss_pred             cCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecCCCe
Confidence            99999999999965      356999999999999999999998877778999999999999999999999999999999


Q ss_pred             eeEEEeechhhhhcccEEEEEEecCcccCcccCCCCCccccccccC
Q 009242          490 MWNMRSAIWERQYLGQQFYLKVWNAVHSLANEYDIPSNILVCGKAV  535 (539)
Q Consensus       490 ~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p~~~~~c~~~~  535 (539)
                      .|+||||+++|++.|||.+|.|...     ...++|+++++||.+.
T Consensus       164 ~w~~HCH~~~H~~~GM~~~~~v~~~-----~~~~~P~~~~~cg~~~  204 (214)
T d1aoza3         164 VWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGTA  204 (214)
T ss_dssp             EEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHHH
T ss_pred             eEEEEECcHHHHhCcCcEEEEEccc-----cccCCCccccccccch
Confidence            9999999999999999999987542     3567999999999653
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3dtub1 b.6.1.2 (B:130-281) Cytochrome c oxidase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3ehbb1 b.6.1.2 (B:108-252) Cytochrome c oxidase {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1v54b1 b.6.1.2 (B:91-227) Cytochrome c oxidase {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure