Citrus Sinensis ID: 009245

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------54
MAYTVCTARSLFRSKCVIFLLLFIAVNGSPPEDPIKCSSNNNSSCTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQAAIFGHRHEFADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGLKEV
ccccccccHHHHHHHHHHHHHHHHHHccccccccEEEccccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHccccEEEEcccccccccccccccccEEEEEccccccEEEEEccccEEEEcccccHHHHHHHHHHcccccccccccccccHHHHHHccccccccccccccHHHHHHEEEEEcccccEEEEEccccccccHHHHHHHHHcccccEEEEEEEEEEEEcccEEEEEEEccHHHHHHHHHHHHccccccEEEEEccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccccccEEEccccccccccccccccccccccccccccccccccccccccEEEEEEEEEHHHHHHHHHHHHHHHHHccccccccEEEcEEEEEEEcccccccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccHHHHHHcccccc
cccccccHHHHHHHHHHHHHHHHHHHccccccccEEEcccccccEEEEcEEccccccccccHHHHcccccHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccEEEEHHHcccEEEEcHHccEEEEcccccHHHHHHHHHHcccccccccccccEEEEEEEEccccccccccccccHHHHEEEEEEEEccccEEEEEEEEEccccHHHHHHHHHHHHHHHHEEEEEEEEcccEEEEEEEccccHHHHHHHHHHHHHHccccEEEEEEcccEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHccHHHHHHHHHHHHccccccccccccccccccHHHHHHccccccccccccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHHcccHHHcccEccccEEEEEEcccccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHccccccccHcccccHHHHHHHcccHHHHHHHHHHcccccccccHHHHHHcccccc
maytvctarslfrSKCVIFLLLFIAvngsppedpikcssnnnssctitnsygmfpdrsvckaanvaypasEQELISIVAAAAMTKTRIKVATRfshsipklvcpagqeglliSTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKaglalpygpywwgltvggmlgtgahgsslwgrgssvhdYAVEIrivtpgnpeeeFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVqksdsdlgdqaaifghrhefaditwypsqrkaayrvddrissntsgnglynffpfrpMLSVAMAVVRATEENQEslrdadgkciggklVTSTLNAFAFGLtndgvvfagypvigyqnrlqssgtcldsaedsmitgcgwdpringeffhQTTFSVALSVVKNFIQDIQKLVQMEPkalcglelYNGIIMRYVKASnaylgkqedsldFDIMYyrskdpmaprlYEDVLEEIEQLAVFkygglphwgknrnLVFDGVIKKYKNAGEFLkvkqkfdplglfssewtdqmlglkev
maytvctarslfrSKCVIFLLLFIAVNGSPPEDPIKCSSNNNSSCTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQAAIFGHRhefaditwypsqrKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNAGEFLKvkqkfdplglfssewtdqmlglkev
MAYTVCTARSLFRSKCVIFLLLFIAVNGSPPEDPIKcssnnnssctitnsYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQAAIFGHRHEFADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGLKEV
**YTVCTARSLFRSKCVIFLLLFIAVN*****************CTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQAAIFGHRHEFADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRAT********DADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNAGEFLKVKQKFDPLGLFSSEWTD********
********RSLFRSKCVIFLLLFIAVNGSPPEDPIKCSSNNNSSCTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQAAIFGHRHEFADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGL***
MAYTVCTARSLFRSKCVIFLLLFIAVNGSPPEDPIKCSSNNNSSCTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQAAIFGHRHEFADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGLKEV
**YTVCTARSLFRSKCVIFLLLFIAVNGSPPEDPIKCSSNNNSSCTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQAAIFGHRHEFADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGLKE*
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAYTVCTARSLFRSKCVIFLLLFIAVNGSPPEDPIKCSSNNNSSCTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQAAIFGHRHEFADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGLKEV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query539 2.2.26 [Sep-21-2011]
O06804428 L-gulono-1,4-lactone dehy yes no 0.771 0.971 0.242 1e-22
Q8HXW0440 L-gulonolactone oxidase O yes no 0.732 0.897 0.224 3e-22
Q3ZC33440 L-gulonolactone oxidase O yes no 0.736 0.902 0.211 8e-19
Q9HDX8461 D-arabinono-1,4-lactone o yes no 0.773 0.904 0.237 2e-18
P58710440 L-gulonolactone oxidase O yes no 0.749 0.918 0.207 2e-17
Q7SGY1556 Putative D-arabinono-1,4- N/A no 0.771 0.748 0.213 2e-13
Q90YK3440 L-gulonolactone oxidase O N/A no 0.424 0.520 0.232 3e-10
P10867440 L-gulonolactone oxidase O yes no 0.421 0.515 0.239 2e-09
Q9ZBU1418 Probable xylitol oxidase no no 0.333 0.430 0.313 2e-08
Q6CSY3525 D-arabinono-1,4-lactone o yes no 0.413 0.424 0.299 1e-07
>sp|O06804|GULDH_MYCTU L-gulono-1,4-lactone dehydrogenase OS=Mycobacterium tuberculosis GN=Rv1771 PE=1 SV=2 Back     alignment and function desciption
 Score =  108 bits (270), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 198/486 (40%), Gaps = 70/486 (14%)

Query: 54  FPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLIS 113
           +P   VC  + +  P SE EL  ++A AA    R++ A    HS   + C    +G++I 
Sbjct: 8   WPGEQVCAPSAIVRPTSEAELADVIAQAAKRGERVR-AVGSGHSFTDIAC---TDGVMID 63

Query: 114 TKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHG 173
              L RVL +D     VTVE G  LR +  + A+  L L         ++ G   T  HG
Sbjct: 64  MTGLQRVLDVDQPTGLVTVEGGAKLRALGPQLAQRRLGLENQGDVDPQSITGATATATHG 123

Query: 174 SSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTL 233
           + +  R  ++    V +R+VT G        V  L+E   D+ AA+VSLG LGVISQVTL
Sbjct: 124 TGV--RFQNLSARIVSLRLVTAGG------EVLSLSEG-DDYLAARVSLGALGVISQVTL 174

Query: 234 KLEPLFKRSIAYVQKSDSDLGDQAAIFGHRHEFADITWYPSQRKAAYRVDDRISSNTSGN 293
           +  PLF                      HRH+         QR++  +  +R+     GN
Sbjct: 175 QTVPLFTL--------------------HRHD---------QRRSLAQTLERLDEFVDGN 205

Query: 294 GLYNFFPFRPMLSVAMAVVRATEENQESLRDADG--KCIGGKLVTSTLNAFAFGLTNDGV 351
             + FF F P    A+   R    + E  +   G  + +G       L+     +   G 
Sbjct: 206 DHFEFFVF-PYADKAL--TRTMHRSDEQPKPTPGWQRMVGENFENGGLSL----ICQTGR 258

Query: 352 VFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQ 411
            F    V    NRL ++     + +D          ++    F +  +++     +  +Q
Sbjct: 259 RFPS--VAPRLNRLMTNMMSSSTVQDRAYKVFATQRKVR---FTEMEYAIPRENGREALQ 313

Query: 412 DIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQ--EDSLDFDIMYYRSKDPMAPRL 469
            +  LV+        L +   I +R+    +++L      D+    +  Y   +      
Sbjct: 314 RVIDLVRRR-----SLPIMFPIEVRFSAPDDSFLSTAYGRDTCYIAVHQYAGME------ 362

Query: 470 YEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIKKYKNAGEFLKVKQKFDPLGLFSSEW 529
           +E     +E++ +  Y G PHWGK        + ++Y     F  V+ + DP  +F +++
Sbjct: 363 FESYFRAVEEI-MDDYAGRPHWGKRHYQTAATLRERYPQWDRFAAVRDRLDPDRVFLNDY 421

Query: 530 TDQMLG 535
           T ++LG
Sbjct: 422 TRRVLG 427
Oxidizes L-gulono-1,4-lactone to L-xylo-hexulonolactone which spontaneously isomerizes to L-ascorbate. Can use both cytochrome c and phenazine methosulfate as exogenous electron acceptors, but molecular oxygen does not serve as a substrate. Is very specific for the L-gulono-1,4-lactone substrate, since it can not oxidize L-galactono-1,4-lactone, D-glucurono-3,6-lactone, D-glucuronate, D-arabinose, or D-xylose.
Mycobacterium tuberculosis (taxid: 1773)
EC: 1EC: .EC: 1EC: .EC: 2EC: .EC: -
>sp|Q8HXW0|GGLO_PIG L-gulonolactone oxidase OS=Sus scrofa GN=GULO PE=2 SV=3 Back     alignment and function description
>sp|Q3ZC33|GGLO_BOVIN L-gulonolactone oxidase OS=Bos taurus GN=GULO PE=2 SV=3 Back     alignment and function description
>sp|Q9HDX8|ALO_SCHPO D-arabinono-1,4-lactone oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alo1 PE=3 SV=1 Back     alignment and function description
>sp|P58710|GGLO_MOUSE L-gulonolactone oxidase OS=Mus musculus GN=Gulo PE=1 SV=3 Back     alignment and function description
>sp|Q7SGY1|ALO_NEUCR Putative D-arabinono-1,4-lactone oxidase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alo-1 PE=3 SV=1 Back     alignment and function description
>sp|Q90YK3|GGLO_SCYTO L-gulonolactone oxidase OS=Scyliorhinus torazame GN=GULO PE=2 SV=1 Back     alignment and function description
>sp|P10867|GGLO_RAT L-gulonolactone oxidase OS=Rattus norvegicus GN=Gulo PE=1 SV=3 Back     alignment and function description
>sp|Q9ZBU1|XYOA_STRCO Probable xylitol oxidase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=xyoA PE=1 SV=1 Back     alignment and function description
>sp|Q6CSY3|ALO_KLULA D-arabinono-1,4-lactone oxidase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALO1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query539
356560249579 PREDICTED: L-gulonolactone oxidase-like 0.968 0.901 0.716 0.0
255558952579 d-lactate dehydrogenase, putative [Ricin 0.949 0.884 0.717 0.0
224068123584 predicted protein [Populus trichocarpa] 0.948 0.875 0.719 0.0
255578220589 gulonolactone oxidase, putative [Ricinus 0.951 0.870 0.710 0.0
224068128584 predicted protein [Populus trichocarpa] 0.961 0.886 0.701 0.0
225453604565 PREDICTED: uncharacterized protein LOC10 0.944 0.900 0.705 0.0
356560245577 PREDICTED: uncharacterized protein LOC10 0.974 0.909 0.692 0.0
356506098577 PREDICTED: L-gulonolactone oxidase-like 0.949 0.887 0.691 0.0
356573263589 PREDICTED: uncharacterized protein LOC10 0.975 0.893 0.666 0.0
356559799585 PREDICTED: L-gulonolactone oxidase-like 0.998 0.919 0.669 0.0
>gi|356560249|ref|XP_003548406.1| PREDICTED: L-gulonolactone oxidase-like [Glycine max] Back     alignment and taxonomy information
 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/522 (71%), Positives = 442/522 (84%)

Query: 17  VIFLLLFIAVNGSPPEDPIKCSSNNNSSCTITNSYGMFPDRSVCKAANVAYPASEQELIS 76
            +  L F  V  +PPEDPIKCS++ N+SCTITNSYGMFPDRS+CKA+ V YP SEQEL+S
Sbjct: 9   TLVFLFFSVVLSTPPEDPIKCSNSKNTSCTITNSYGMFPDRSICKASQVLYPTSEQELVS 68

Query: 77  IVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAMTVTVESGV 136
           +VA+A   KT++KVATR+SHSIPKLVCP G+ GLLISTK+LN++ K+DV+A T+TVESGV
Sbjct: 69  VVASATRNKTKMKVATRYSHSIPKLVCPEGENGLLISTKYLNKIAKVDVEARTMTVESGV 128

Query: 137 TLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPG 196
           T++Q+I E+AK GLALPY PYWWGLT+GG++GTGAHGS+LWG+GSSVHDY VE+RIV   
Sbjct: 129 TMKQLINEAAKVGLALPYAPYWWGLTIGGLMGTGAHGSTLWGKGSSVHDYVVELRIVRAA 188

Query: 197 NPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQ 256
            PEE +     LNE H+D  AAKVSLGVLGVISQVTLKLEPLFKRSI YV K+DSDLGDQ
Sbjct: 189 GPEEGYAKAESLNEQHEDLNAAKVSLGVLGVISQVTLKLEPLFKRSITYVAKNDSDLGDQ 248

Query: 257 AAIFGHRHEFADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATE 316
            A FGH HEFADITWYPSQRKA YRVDDR+  NTSGNGLY+F PFRP  S+ +A++R TE
Sbjct: 249 VAAFGHAHEFADITWYPSQRKAVYRVDDRVPFNTSGNGLYDFIPFRPTPSLELAILRTTE 308

Query: 317 ENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQSSGTCLDSAE 376
           + QES  DADGKCIG K  T+TL   A+GLTN+G++F  YPVIG+QNRLQ+SG+CLDS +
Sbjct: 309 DLQESTGDADGKCIGSKTTTNTLITAAYGLTNNGIIFTVYPVIGFQNRLQASGSCLDSLQ 368

Query: 377 DSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMR 436
           D+ IT C WD R+ GEFFHQTTFS++LSV K FI+D+QKLVQ+EPK  CG+ELYNGI+MR
Sbjct: 369 DAKITACAWDSRVKGEFFHQTTFSISLSVAKKFIEDVQKLVQLEPKGFCGIELYNGILMR 428

Query: 437 YVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRN 496
           YVKAS+AYLGKQED+LD DI YYRSKDPM PRLYED+LEE+EQL +FKYGGLPHWGKNRN
Sbjct: 429 YVKASSAYLGKQEDALDIDITYYRSKDPMTPRLYEDILEEVEQLGIFKYGGLPHWGKNRN 488

Query: 497 LVFDGVIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGLKE 538
           L F+G IKKYKNAG FL+VK+K+D  GLFSS WTDQMLGLK+
Sbjct: 489 LAFEGAIKKYKNAGRFLRVKEKYDLQGLFSSTWTDQMLGLKD 530

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255558952|ref|XP_002520499.1| d-lactate dehydrogenase, putative [Ricinus communis] gi|223540341|gb|EEF41912.1| d-lactate dehydrogenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224068123|ref|XP_002302668.1| predicted protein [Populus trichocarpa] gi|222844394|gb|EEE81941.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255578220|ref|XP_002529978.1| gulonolactone oxidase, putative [Ricinus communis] gi|223530540|gb|EEF32421.1| gulonolactone oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224068128|ref|XP_002302669.1| predicted protein [Populus trichocarpa] gi|222844395|gb|EEE81942.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225453604|ref|XP_002267268.1| PREDICTED: uncharacterized protein LOC100260872 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356560245|ref|XP_003548404.1| PREDICTED: uncharacterized protein LOC100789425 [Glycine max] Back     alignment and taxonomy information
>gi|356506098|ref|XP_003521824.1| PREDICTED: L-gulonolactone oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356573263|ref|XP_003554782.1| PREDICTED: uncharacterized protein LOC100801515 [Glycine max] Back     alignment and taxonomy information
>gi|356559799|ref|XP_003548184.1| PREDICTED: L-gulonolactone oxidase-like isoform 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query539
TAIR|locus:2044350603 GulLO6 "L -gulono-1,4-lactone 0.975 0.872 0.636 1.7e-187
TAIR|locus:2044340591 GulLO2 "L -gulono-1,4-lactone 0.992 0.905 0.612 6.6e-184
TAIR|locus:2161033577 GulLO4 "L -gulono-1,4-lactone 0.962 0.899 0.617 1.9e-179
TAIR|locus:2044330590 GulLO5 "L -gulono-1,4-lactone 0.975 0.891 0.600 1.9e-179
TAIR|locus:2825463595 GulLO1 "L -gulono-1,4-lactone 0.964 0.873 0.610 1.7e-178
TAIR|locus:2144251585 GulLO3 "L -gulono-1,4-lactone 0.951 0.876 0.454 1.1e-121
TAIR|locus:2161103252 GulLO7 "L -gulono-1,4-lactone 0.346 0.742 0.670 2.7e-68
UNIPROTKB|Q8HXW0440 GULO "L-gulonolactone oxidase" 0.406 0.497 0.280 5.7e-23
UNIPROTKB|O06804428 MT1821 "L-gulono-1,4-lactone d 0.320 0.404 0.349 8.8e-21
UNIPROTKB|Q3ZC33440 GULO "L-gulonolactone oxidase" 0.410 0.502 0.261 3.9e-20
TAIR|locus:2044350 GulLO6 "L -gulono-1,4-lactone ( L -GulL) oxidase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1818 (645.0 bits), Expect = 1.7e-187, P = 1.7e-187
 Identities = 338/531 (63%), Positives = 417/531 (78%)

Query:     9 RSLFRSKCVIFLLLFIAVNGSPPEDPIKXXXXXXXXXXXXXXYGMFPDRSVCKAANVAYP 68
             R++F   C I  L+F  ++ +PPEDP+K              YG FPDRS C+AANVAYP
Sbjct:    18 RTIFVVHC-ISTLVFTTIS-TPPEDPVKCVSGNTNCTVTNS-YGAFPDRSTCRAANVAYP 74

Query:    69 ASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLNRVLKLDVQAM 128
              +E ELIS+VAAA     +++V TR+SHSI KL C  G +GLLISTK LN  ++ D  AM
Sbjct:    75 TTEAELISVVAAATKAGRKMRVTTRYSHSITKLACTDGTDGLLISTKFLNHTVRTDATAM 134

Query:   129 TVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAV 188
             T+TVESGVTLRQ+I E+AK GLALPY PYWWGLTVGGM+GTGAHGSSLWG+GS+VHDY  
Sbjct:   135 TLTVESGVTLRQLIAEAAKVGLALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHDYVT 194

Query:   189 EIRIVTPGNPEEEFVNVRVLNESH--QDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYV 246
             EIRIV+PG+  + F  VRVL E+   ++F AAKVSLGVLGVISQVTLKL+P+FKRS+ YV
Sbjct:   195 EIRIVSPGSVNDGFAKVRVLRETTTPKEFNAAKVSLGVLGVISQVTLKLQPMFKRSLRYV 254

Query:   247 QKSDSDLGDQAAIFGHRHEFADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLS 306
              ++DSD GDQA  FG +HEFAD  W PSQ K  YR+DDR++ NTSGNGL +F PFR  LS
Sbjct:   255 MRNDSDFGDQAVTFGMKHEFADFIWLPSQGKVVYRMDDRVAVNTSGNGLLDFMPFRSQLS 314

Query:   307 VAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQ 366
              A+A++R++EE QE  RDA+GKC G  L+TSTL A ++GLTN+G++F GYPVIG QNR+ 
Sbjct:   315 AALAIIRSSEETQERFRDANGKCAGATLITSTLFATSYGLTNNGMIFTGYPVIGSQNRMM 374

Query:   367 SSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCG 426
             SSG+CLDS  D +IT C WD RI  EFFHQTTFS+ L+ VK+FI DI+ LV++E K+LC 
Sbjct:   375 SSGSCLDSLHDGLITACPWDSRIKSEFFHQTTFSIPLTQVKSFINDIKSLVKIESKSLCV 434

Query:   427 LELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYG 486
             LELY+GI+MRYV +S AYLGK+ ++LDFD+ YYR+KDP++PRLYED +EEIEQ+A+FKY 
Sbjct:   435 LELYDGILMRYVTSSPAYLGKETEALDFDLTYYRAKDPLSPRLYEDFIEEIEQIALFKYN 494

Query:   487 GLPHWGKNRNLVFDGVIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGLK 537
              LPHWGKNRNL FDGVIKKYKN   FLKVK+ +DP+GLFSSEWTDQ+LG+K
Sbjct:   495 ALPHWGKNRNLAFDGVIKKYKNVPAFLKVKESYDPMGLFSSEWTDQILGIK 545
GO:0003824 "catalytic activity" evidence=IEA
GO:0003885 "D-arabinono-1,4-lactone oxidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=IEA
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010014 "meristem initiation" evidence=RCA
GO:0010089 "xylem development" evidence=RCA
GO:0042546 "cell wall biogenesis" evidence=RCA
GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA
TAIR|locus:2044340 GulLO2 "L -gulono-1,4-lactone ( L -GulL) oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161033 GulLO4 "L -gulono-1,4-lactone ( L -GulL) oxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044330 GulLO5 "L -gulono-1,4-lactone ( L -GulL) oxidase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825463 GulLO1 "L -gulono-1,4-lactone ( L -GulL) oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144251 GulLO3 "L -gulono-1,4-lactone ( L -GulL) oxidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161103 GulLO7 "L -gulono-1,4-lactone ( L -GulL) oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8HXW0 GULO "L-gulonolactone oxidase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|O06804 MT1821 "L-gulono-1,4-lactone dehydrogenase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
UNIPROTKB|Q3ZC33 GULO "L-gulonolactone oxidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query539
TIGR01677557 TIGR01677, pln_FAD_oxido, plant-specific FAD-depen 0.0
PLN00107257 PLN00107, PLN00107, FAD-dependent oxidoreductase; 1e-101
COG0277459 COG0277, GlcD, FAD/FMN-containing dehydrogenases [ 6e-28
TIGR01679419 TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase 8e-27
pfam01565139 pfam01565, FAD_binding_4, FAD binding domain 6e-23
TIGR01678438 TIGR01678, FAD_lactone_ox, sugar 1,4-lactone oxida 3e-19
PLN02465573 PLN02465, PLN02465, L-galactono-1,4-lactone dehydr 7e-15
pfam04030258 pfam04030, ALO, D-arabinono-1,4-lactone oxidase 6e-10
TIGR00387413 TIGR00387, glcD, glycolate oxidase, subunit GlcD 3e-09
PLN02805555 PLN02805, PLN02805, D-lactate dehydrogenase [cytoc 5e-09
TIGR01676541 TIGR01676, GLDHase, galactonolactone dehydrogenase 2e-08
TIGR01678438 TIGR01678, FAD_lactone_ox, sugar 1,4-lactone oxida 2e-04
COG0812291 COG0812, MurB, UDP-N-acetylmuramate dehydrogenase 0.002
>gnl|CDD|233524 TIGR01677, pln_FAD_oxido, plant-specific FAD-dependent oxidoreductase Back     alignment and domain information 
 Score =  765 bits (1976), Expect = 0.0
 Identities = 319/514 (62%), Positives = 400/514 (77%), Gaps = 6/514 (1%)

Query: 30  PPEDPIKCSSNNNSSCTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIK 89
           PP+DP++C S   ++CT++N+YG FPDRS C+AANVAYP +E EL+S+VAAA     ++K
Sbjct: 1   PPDDPVRCVSGG-ANCTVSNAYGAFPDRSTCRAANVAYPKTEAELVSVVAAATAAGRKMK 59

Query: 90  VATRFSHSIPKLVCPAGQEG-LLISTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKA 148
           V TR+SHSIPKL CP G +G LLISTK LN V+ +D  AMTVTVESG++LR++I E+ KA
Sbjct: 60  VVTRYSHSIPKLACPDGSDGALLISTKRLNHVVAVDATAMTVTVESGMSLRELIVEAEKA 119

Query: 149 GLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVL 208
           GLALPY PYWWGLTVGGM+GTGAHGSSLWG+GS+VHDY V IR+V P +  E F  VR+L
Sbjct: 120 GLALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHDYVVGIRLVVPASAAEGFAKVRIL 179

Query: 209 NESHQD--FYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQAAIFGHRHEF 266
           +E      F AAKVSLGVLGVISQVTL L+P+FKRS+ Y  + DSD  DQ   FG +HEF
Sbjct: 180 SEGDTPNEFNAAKVSLGVLGVISQVTLALQPMFKRSVTYTMRDDSDFEDQFVTFGKKHEF 239

Query: 267 ADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDAD 326
           ADITWYPSQ KA YR DDR+  N SGNG+ +F  FR  L  A+A +RA EE  E  R+A+
Sbjct: 240 ADITWYPSQGKAVYRRDDRVPVNASGNGVNDFLGFRSTLIAAIAGIRALEETFERSRNAN 299

Query: 327 GKCIGGKLVTSTLNAFAFGLTN-DGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGW 385
           GKC+   + ++ L    +GLTN  G++F GYPV+G Q R+Q+SG+CLDS +D ++T C W
Sbjct: 300 GKCVTATITSAALFLPGYGLTNSGGIIFTGYPVVGSQGRMQTSGSCLDSPQDGLLTACAW 359

Query: 386 DPRING-EFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAY 444
           DPR  G  FFHQTT SV +S  ++F+ D+++L  MEPK+LCG+ELYNGI++RYVKAS AY
Sbjct: 360 DPRYKGLFFFHQTTLSVPVSRFRDFVLDVKRLRDMEPKSLCGVELYNGILIRYVKASPAY 419

Query: 445 LGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIK 504
           LGK+ED++DFD  YYR+KDP+ PRLYEDV+EEIEQ+A FKYG LPHWGKNRNL FDGVI+
Sbjct: 420 LGKEEDAVDFDFTYYRAKDPLTPRLYEDVIEEIEQMAFFKYGALPHWGKNRNLAFDGVIR 479

Query: 505 KYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGLKE 538
           KY NA +FLKVK  +DP GLFSSEW+D++LG+K 
Sbjct: 480 KYPNADKFLKVKDSYDPKGLFSSEWSDEILGIKG 513

This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown. Length = 557
>gnl|CDD|165679 PLN00107, PLN00107, FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>gnl|CDD|223354 COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|130740 TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase Back     alignment and domain information
>gnl|CDD|216574 pfam01565, FAD_binding_4, FAD binding domain Back     alignment and domain information
>gnl|CDD|233525 TIGR01678, FAD_lactone_ox, sugar 1,4-lactone oxidases Back     alignment and domain information
>gnl|CDD|215258 PLN02465, PLN02465, L-galactono-1,4-lactone dehydrogenase Back     alignment and domain information
>gnl|CDD|217852 pfam04030, ALO, D-arabinono-1,4-lactone oxidase Back     alignment and domain information
>gnl|CDD|129482 TIGR00387, glcD, glycolate oxidase, subunit GlcD Back     alignment and domain information
>gnl|CDD|178402 PLN02805, PLN02805, D-lactate dehydrogenase [cytochrome] Back     alignment and domain information
>gnl|CDD|130737 TIGR01676, GLDHase, galactonolactone dehydrogenase Back     alignment and domain information
>gnl|CDD|233525 TIGR01678, FAD_lactone_ox, sugar 1,4-lactone oxidases Back     alignment and domain information
>gnl|CDD|223882 COG0812, MurB, UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 539
TIGR01677557 pln_FAD_oxido plant-specific FAD-dependent oxidore 100.0
KOG4730518 consensus D-arabinono-1, 4-lactone oxidase [Defens 100.0
TIGR01676541 GLDHase galactonolactone dehydrogenase. This model 100.0
TIGR01678438 FAD_lactone_ox sugar 1,4-lactone oxidases. This mo 100.0
PLN02465573 L-galactono-1,4-lactone dehydrogenase 100.0
TIGR01679419 bact_FAD_ox FAD-linked oxidoreductase. This model 100.0
PLN00107257 FAD-dependent oxidoreductase; Provisional 100.0
PLN02441525 cytokinin dehydrogenase 100.0
PF04030259 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: I 100.0
COG0277459 GlcD FAD/FMN-containing dehydrogenases [Energy pro 100.0
PLN02805555 D-lactate dehydrogenase [cytochrome] 100.0
PRK11230499 glycolate oxidase subunit GlcD; Provisional 100.0
TIGR00387413 glcD glycolate oxidase, subunit GlcD. This protein 99.98
KOG1231505 consensus Proteins containing the FAD binding doma 99.97
PRK11282352 glcE glycolate oxidase FAD binding subunit; Provis 99.96
KOG1233613 consensus Alkyl-dihydroxyacetonephosphate synthase 99.92
PF01565139 FAD_binding_4: FAD binding domain This is only a s 99.92
PRK11183564 D-lactate dehydrogenase; Provisional 99.9
KOG1232511 consensus Proteins containing the FAD binding doma 99.88
PRK13905298 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.88
PRK14652302 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.83
TIGR00179284 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.82
PRK13906307 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.82
PRK12436305 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.81
KOG1262543 consensus FAD-binding protein DIMINUTO [General fu 99.81
PRK13903363 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.79
PRK14653297 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.77
PRK14649295 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.77
PRK14650302 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.73
COG0812291 MurB UDP-N-acetylmuramate dehydrogenase [Cell enve 99.72
PRK00046334 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.7
PRK14648354 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.68
PRK14651273 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.56
PF09129321 Chol_subst-bind: Cholesterol oxidase, substrate-bi 99.36
PRK13904257 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.32
PF00941171 FAD_binding_5: FAD binding domain in molybdopterin 97.04
PF09265281 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and c 96.72
PRK09799258 putative oxidoreductase; Provisional 96.47
TIGR03312257 Se_sel_red_FAD probable selenate reductase, FAD-bi 96.08
PF02913248 FAD-oxidase_C: FAD linked oxidases, C-terminal dom 95.51
TIGR02963467 xanthine_xdhA xanthine dehydrogenase, small subuni 95.45
PRK09971291 xanthine dehydrogenase subunit XdhB; Provisional 95.27
PF0803147 BBE: Berberine and berberine like ; InterPro: IPR0 95.27
TIGR03195321 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta s 95.02
TIGR03199264 pucC xanthine dehydrogenase C subunit. This gene h 94.09
PLN02906 1319 xanthine dehydrogenase 91.58
TIGR02969 1330 mam_aldehyde_ox aldehyde oxidase. Members of this 91.39
PLN00192 1344 aldehyde oxidase 90.46
COG4630493 XdhA Xanthine dehydrogenase, iron-sulfur cluster a 89.83
COG1319284 CoxM Aerobic-type carbon monoxide dehydrogenase, m 87.27
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=1.3e-94  Score=777.92  Aligned_cols=507  Identities=63%  Similarity=1.132  Sum_probs=430.0

Q ss_pred             CCCCCeecCCCCCCccccccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCCC-C
Q 009245           30 PPEDPIKCSSNNNSSCTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQ-E  108 (539)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~~-~  108 (539)
                      +|+++++|++ ++++|++.|+|+||++++.+.|..+++|+|++||+++|+.|++++++|+++||+|||+++++++.+. +
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~w~nWag~~~~~p~~vv~P~s~eeV~~iV~~A~~~g~~v~v~GG~gHs~~~~a~t~~~~g   79 (557)
T TIGR01677         1 PPDDPVRCVS-GGANCTVSNAYGAFPDRSTCRAANVAYPKTEAELVSVVAAATAAGRKMKVVTRYSHSIPKLACPDGSDG   79 (557)
T ss_pred             CCCCCeeccc-CCCCceeecchhhcCCcccCCCCEEEecCCHHHHHHHHHHHHHCCCeEEEEeCCCCCcCcccccCCCCC
Confidence            5778999976 7789999999999999999999999999999999999999999999999997789999998887533 3


Q ss_pred             cEEEEcCCCCCceEeeCCCCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCcccccee
Q 009245          109 GLLISTKHLNRVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVHDYAV  188 (539)
Q Consensus       109 gv~I~l~~l~~ii~id~~~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~d~V~  188 (539)
                      +++|||++||+++++|.++++|||+||+++.+|.+.|.++|+++++.+++..+||||+++||+||++..+++|.++|+|+
T Consensus        80 gvvIdL~~Ln~il~iD~~~~tVtV~AG~~l~~L~~~L~~~Glal~~~~~~~~~TVGGaiatGthGs~~~~~~G~l~d~V~  159 (557)
T TIGR01677        80 ALLISTKRLNHVVAVDATAMTVTVESGMSLRELIVEAEKAGLALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHDYVV  159 (557)
T ss_pred             EEEEEcccCCCCEEEeCCCCEEEECCCCcHHHHHHHHHHcCCEeccCCCCCCeEeeEhhhCCCCCccccccccchhheEE
Confidence            69999999999999999999999999999999999999999999999988889999999999999988556899999999


Q ss_pred             EEEEEccCCCcccceeEEEcCC-Cccc-ccccccccccceeeEEeEEEeEEcCcccEEEEecCcchHHHHHHHhcccccc
Q 009245          189 EIRIVTPGNPEEEFVNVRVLNE-SHQD-FYAAKVSLGVLGVISQVTLKLEPLFKRSIAYVQKSDSDLGDQAAIFGHRHEF  266 (539)
Q Consensus       189 ~~~vV~~~G~~~~~~~v~~~~~-~~~d-f~a~~gs~G~lGiIt~vtl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (539)
                      ++++|+++|+.+|.++++++++ +++| |++++||+|+|||||++|||++|.++....+...+.+.+.+.++++.++++|
T Consensus       160 ~l~vV~a~G~a~G~~~v~~~s~~~~~dLf~a~rgslG~lGVVtevTL~~~P~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  239 (557)
T TIGR01677       160 GIRLVVPASAAEGFAKVRILSEGDTPNEFNAAKVSLGVLGVISQVTLALQPMFKRSVTYTMRDDSDFEDQFVTFGKKHEF  239 (557)
T ss_pred             EEEEEeCCCcccCcceEEEeCCCCCHHHHHhhccCCCccEeeeEEEEEEEccccceEEEEcCCHHHHHHHHHHhhcCCeE
Confidence            9999999996555556888887 5677 9999999999999999999999999877777777777788889999999999


Q ss_pred             eeEEEecCCCceeeeeccccCCCCCCCCcccccCccchhHHHHHHhhhcHHHHhhccccCccccccchhhhhhhhhhccc
Q 009245          267 ADITWYPSQRKAAYRVDDRISSNTSGNGLYNFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGGKLVTSTLNAFAFGL  346 (539)
Q Consensus       267 ~~~~w~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (539)
                      ++|+|+|+++.++++..++++.+..++..+++++++..++......+..++.++......+.|....+.+...+.+.+++
T Consensus       240 ~~f~w~P~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (557)
T TIGR01677       240 ADITWYPSQGKAVYRRDDRVPVNASGNGVNDFLGFRSTLIAAIAGIRALEETFERSRNANGKCVTATITSAALFLPGYGL  319 (557)
T ss_pred             EEEEEECCCCeEEEEecCcCCCCCCcchhhhhccccccchhhhhhhhhhhHHHhhhcccccceeccccccchhhhhcccc
Confidence            99999999999999998987765444555565555433222222222222332322223345554444433333333333


Q ss_pred             cc-CCeeeeccccccccccccccccccccccccccccccCCCcccC-cceeeeEEEEechhHHHHHHHHHHHHHhCcccc
Q 009245          347 TN-DGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPRING-EFFHQTTFSVALSVVKNFIQDIQKLVQMEPKAL  424 (539)
Q Consensus       347 ~~-~~~~~~~~~~v~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~E~~iP~~~~~~~l~~v~~~~~~~~~~~  424 (539)
                      .. ++..++..+++|++++|++++.|.+.+.+.+...|.|+++.+. .+|+||||+||++++.++|++|++++++.+..+
T Consensus       320 ~~~~~~~~~~~~~~g~s~~v~~~~~c~~~~~~~~~~~~~~~~~~~~~~~f~e~EyavP~e~~~~al~~vr~~~~~~~~~~  399 (557)
T TIGR01677       320 TNSGGIIFTGYPVVGSQGRMQTSGSCLDSPQDGLLTACAWDPRYKGLFFFHQTTLSVPVSRFRDFVLDVKRLRDMEPKSL  399 (557)
T ss_pred             cccccccccCCceecchHhhcccccccccccccccccCccccccccccceeEEEEEeeHHHHHHHHHHHHHHHHhccccc
Confidence            21 2233556688999999999999987766555557899877655 679999999999999999999999999887666


Q ss_pred             ccceeeeeEEEEEecCCCCCCCCCCCeEEEEEEEeccCCCCCccccHHHHHHHHHHHHhhcCCccccccCCCccchhHHH
Q 009245          425 CGLELYNGIIMRYVKASNAYLGKQEDSLDFDIMYYRSKDPMAPRLYEDVLEEIEQLAVFKYGGLPHWGKNRNLVFDGVIK  504 (539)
Q Consensus       425 ~~~~~~~pi~~Rfv~~d~~~Ls~~~d~~~i~i~~~~~~~~~~~~~~~~~~~~ie~~~~~~~gGRPHWgK~~~~~~~~l~~  504 (539)
                      |..+++|||||||+++||+||||+||+|||+|++|++.+++.|+.|++||+++|+|++.+|||||||||+|.++++++++
T Consensus       400 ~~~~~~fpievR~v~aDd~wLSp~rds~~i~~~~~~~~~~~~~~~~~~~f~~~E~i~l~~yggRPHWGK~h~~~~~~l~~  479 (557)
T TIGR01677       400 CGVELYNGILIRYVKASPAYLGKEEDAVDFDFTYYRAKDPLTPRLYEDVIEEIEQMAFFKYGALPHWGKNRNLAFDGVIR  479 (557)
T ss_pred             CceeeecCeEEEEecCCccccCCCCceEEEEEEEecCCCCcccchHHHHHHHHHHHHHhhcCCCCCccccccchHHHHHH
Confidence            77789999999999999999999999999999999999888999999999999997579999999999999999999999


Q ss_pred             hCCCHHHHHHHHHhcCCCCCCcchhhhhhcCCC
Q 009245          505 KYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGLK  537 (539)
Q Consensus       505 ~YP~~~~F~~~r~~~DP~g~F~n~~~~~llg~~  537 (539)
                      +||+|++|+++|+++||+|+|.|+|+++|||..
T Consensus       480 ~YP~~~dF~alR~~~DP~g~F~N~yl~~l~~~~  512 (557)
T TIGR01677       480 KYPNADKFLKVKDSYDPKGLFSSEWSDEILGIK  512 (557)
T ss_pred             hCCCHHHHHHHHHhcCCCCccCCHHHHHHhCcC
Confidence            999999999999999999999999999999863

This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
>KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms] Back     alignment and domain information
>TIGR01676 GLDHase galactonolactone dehydrogenase Back     alignment and domain information
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases Back     alignment and domain information
>PLN02465 L-galactono-1,4-lactone dehydrogenase Back     alignment and domain information
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase Back     alignment and domain information
>PLN00107 FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>PLN02441 cytokinin dehydrogenase Back     alignment and domain information
>PF04030 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: IPR007173 This domain is specific to D-arabinono-1,4-lactone oxidase 1 Back     alignment and domain information
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>PLN02805 D-lactate dehydrogenase [cytochrome] Back     alignment and domain information
>PRK11230 glycolate oxidase subunit GlcD; Provisional Back     alignment and domain information
>TIGR00387 glcD glycolate oxidase, subunit GlcD Back     alignment and domain information
>KOG1231 consensus Proteins containing the FAD binding domain [Energy production and conversion] Back     alignment and domain information
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional Back     alignment and domain information
>KOG1233 consensus Alkyl-dihydroxyacetonephosphate synthase [General function prediction only] Back     alignment and domain information
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage Back     alignment and domain information
>PRK11183 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>KOG1232 consensus Proteins containing the FAD binding domain [Energy production and conversion] Back     alignment and domain information
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase Back     alignment and domain information
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>KOG1262 consensus FAD-binding protein DIMINUTO [General function prediction only] Back     alignment and domain information
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PF09129 Chol_subst-bind: Cholesterol oxidase, substrate-binding; InterPro: IPR015213 The substrate-binding domain found in cholesterol oxidase is composed of an eight-stranded mixed beta-pleated sheet and six alpha-helices Back     alignment and domain information
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain Back     alignment and domain information
>PF09265 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and cytokinin binding; InterPro: IPR015345 This domain adopts an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold Back     alignment and domain information
>PRK09799 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit Back     alignment and domain information
>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage Back     alignment and domain information
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit Back     alignment and domain information
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional Back     alignment and domain information
>PF08031 BBE: Berberine and berberine like ; InterPro: IPR012951 This domain is found in the berberine bridge and berberine bridge-like enzymes, which are involved in the biosynthesis of numerous isoquinoline alkaloids Back     alignment and domain information
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit Back     alignment and domain information
>TIGR03199 pucC xanthine dehydrogenase C subunit Back     alignment and domain information
>PLN02906 xanthine dehydrogenase Back     alignment and domain information
>TIGR02969 mam_aldehyde_ox aldehyde oxidase Back     alignment and domain information
>PLN00192 aldehyde oxidase Back     alignment and domain information
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism] Back     alignment and domain information
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query539
2vfr_A422 Alditol Oxidase From Streptomyces Coelicolor A3(2): 2e-09
4bca_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 8e-09
4bby_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 9e-09
4bc7_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 9e-09
4aut_A468 Crystal Structure Of The Tuberculosis Drug Target D 2e-07
4g3t_A403 Mycobacterium Smegmatis Dpre1 - Hexagonal Crystal F 2e-07
4fdn_A481 Mycobacterium Tuberculosis Dpre1 In Complex With Ct 1e-05
3pm9_A476 Crystal Structure Of A Putative Dehydrogenase (Rpa1 7e-05
>pdb|2VFR|A Chain A, Alditol Oxidase From Streptomyces Coelicolor A3(2): Native Enzyme Length = 422 Back     alignment and structure 
Iteration: 1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 62  AANVAYPASE---QELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAGQEGLLISTKHLN 118
           A N+ Y A E      +  + A      R++V     HS  ++  P G  G+L+S   L 
Sbjct: 14  AGNITYTAKELLRPHSLDALRALVADSARVRVLGS-GHSFNEIAEP-GDGGVLLSLAGLP 71
Query: 119 RVLKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWG 178
            V+ +D  A TV V  GV   ++       GLALP       ++V G + TG HGS + G
Sbjct: 72  SVVDVDTAARTVRVGGGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHGSGV-G 130
Query: 179 RGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPL 238
            GS +     E+ +VT         +  V+    + F  A  SLG LGV++ +TL LEP 
Sbjct: 131 NGS-LASVVREVELVTADG------STVVIARGDERFGGAVTSLGALGVVTSLTLDLEPA 183
Query: 239 FK 240
           ++
Sbjct: 184 YE 185
>pdb|4BCA|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Tyr578phe Mutant Length = 658 Back     alignment and structure
>pdb|4BBY|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Wild-Type Length = 658 Back     alignment and structure
>pdb|4BC7|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Arg419his Mutant Length = 658 Back     alignment and structure
>pdb|4AUT|A Chain A, Crystal Structure Of The Tuberculosis Drug Target Decaprenyl-Phosphoryl-Beta-D-Ribofuranose-2- Oxidoreductase (Dpre1) From Mycobacterium Smegmatis Length = 468 Back     alignment and structure
>pdb|4G3T|A Chain A, Mycobacterium Smegmatis Dpre1 - Hexagonal Crystal Form Length = 403 Back     alignment and structure
>pdb|4FDN|A Chain A, Mycobacterium Tuberculosis Dpre1 In Complex With Ct325 - Hexagonal Crystal Form Length = 481 Back     alignment and structure
>pdb|3PM9|A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution Length = 476 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query539
3js8_A540 Cholesterol oxidase; cholsterol, organic solvent s 2e-80
2i0k_A561 Oxidoreductase; MIX alpha beta, covalent FAD, flav 8e-72
2vfr_A422 Xylitol oxidase, alditol oxidase; FAD, sugar, poly 6e-69
4feh_A481 Oxidoreductase DPRE1; alpha+beta, decaprenylphosph 7e-49
2exr_A524 Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin 8e-20
1w1o_A534 Cytokinin dehydrogenase 1; flavin, oxidoreductase, 1e-19
2bvf_A459 6-hydroxy-D-nicotine oxidase; autoflavinylation, e 4e-15
2uuu_A584 Alkyldihydroxyacetonephosphate synthase; transfera 1e-14
3rja_A473 Carbohydrate oxidase; protein-substrate analogue c 2e-14
1e8g_A560 Vanillyl-alcohol oxidase; oxidoreductase, flavoenz 1e-12
3vte_A518 Tetrahydrocannabinolic acid synthase; BI-covalent 2e-12
3fw9_A495 Reticuline oxidase; BI-covalent flavinylation, N-g 5e-12
1zr6_A503 Glucooligosaccharide oxidase; alpha + beta, flavoe 2e-11
1wvf_A520 4-cresol dehydrogenase [hydroxylating] flavoprote 5e-11
3pm9_A476 Putative oxidoreductase; putative D-2-hydroxygluta 7e-11
2ipi_A521 Aclacinomycin oxidoreductase (aknox); anthracyclin 8e-11
2wdx_A523 Putative hexose oxidase; oxidoreductase-antibiotic 2e-10
2y3s_A530 TAML; oxidoreductase; HET: FAD TIR; 1.67A {Strepto 3e-10
2yvs_A219 Glycolate oxidase subunit GLCE; oxidoreductase; 2. 3e-10
3pop_A501 GILR oxidase; FAD binding protein, gilvocarcin, gi 5e-10
1f0x_A571 DLDH, D-lactate dehydrogenase; oxidoreductase; HET 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1hsk_A326 UDP-N-acetylenolpyruvoylglucosamine reductase; pep 7e-06
3tx1_A322 UDP-N-acetylenolpyruvoylglucosamine reductase; str 2e-05
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} Length = 540 Back     alignment and structure
 Score =  260 bits (665), Expect = 2e-80
 Identities = 73/533 (13%), Positives = 156/533 (29%), Gaps = 76/533 (14%)

Query: 60  CKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAG---QEGLLISTKH 116
                   P S  E++ +   A     +++      H+   L   AG      +L+ T  
Sbjct: 28  VDDVWTCAPRSADEVVKVANWAKDNGYKVRARGM-MHNWSPLTLAAGVSCPAVVLLDTTR 86

Query: 117 LNRVLKLDVQA--MTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGS 174
               + +D       VT ++G+T+  ++    KAGL +   P    LT+GG+L    HG+
Sbjct: 87  YLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGT 146

Query: 175 SLWGRGS---------SVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVL 225
           ++  +G          S+ +  + +  V   +       +R    +     A  ++    
Sbjct: 147 AIPAKGERRLAGASYGSISNLVLSLTAVVY-DKASGAYALRKFARND-PQIAPLLAHVGR 204

Query: 226 GVISQVTLKLEPLFK-RSIAYVQ-------KSDSDLGDQAAIFGHRHEFADITWYPSQRK 277
            +I + TL+  P  + R  ++          +    G   A +       +  W+P    
Sbjct: 205 SLIVEATLQAAPNQRLRCQSWFNIPYGEMFAAAGSGGRTFASYLDSAGRVEAIWFPFTSN 264

Query: 278 AAYRVDDRISSNTSGNGLYNFFPFRP---------MLSVAMAVVRATEENQESLRDADGK 328
              +V     +    +   +     P                +     +   +   A   
Sbjct: 265 PWLKVWTVTPNKPLFSRQTDKPFNYPFSDNLPDEVTDLANKILSLGDGKLTPAFGKAQFA 324

Query: 329 CIGGKLVTSTLNAFAFGLTNDGVVFAGYPVIGYQNRLQSSGTCLDSAEDSMITGCGWDPR 388
                LV +      +G + + +++     +       +  T  ++ +  +     +   
Sbjct: 325 AASAGLVATASWDL-WGWSKNLLLYVKPTTLRVTANGYAVLTRRENVQRVLNEFVTFYQA 383

Query: 389 INGEFFHQTTFSVALSVVKNFIQDIQKLVQMEPKALCGLELYNGIIMRYVKASNAYLGKQ 448
               +  Q  + +   V         ++  ++  +   L       +       + +  +
Sbjct: 384 RVQAYQQQGRYPMNGPV-------EIRVTGLDDPSEAALSGGVAPAL-------SAIRPR 429

Query: 449 EDSLDFDIMYYRS--KDPMAPRLYEDVLEEIEQLAVFKYGGL-----PHWGKNRNLVFDG 501
            D  ++++  +      P  P        EIEQ     + G      P W K        
Sbjct: 430 PDHPEWNVAVWLDILTLPGTPYA-NQFYREIEQWIEANFNGSYAAVRPEWSKGWGYTDQA 488

Query: 502 ------------------VIKKYKNAGEFLKVKQKFDPLGLFSSEWTDQMLGL 536
                                   N          +DP  LFSS   D  LGL
Sbjct: 489 AWADSAMLQTTIPNAFRAGQPAAANWDAAKAALAAYDPYRLFSSPLLDS-LGL 540
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A* Length = 561 Back     alignment and structure
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* Length = 422 Back     alignment and structure
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* Length = 481 Back     alignment and structure
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* Length = 524 Back     alignment and structure
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* Length = 534 Back     alignment and structure
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A* Length = 459 Back     alignment and structure
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Length = 584 Back     alignment and structure
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A* Length = 473 Back     alignment and structure
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* Length = 560 Back     alignment and structure
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa} Length = 518 Back     alignment and structure
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 3fw8_A* 3fw7_A* 3fwa_A* Length = 495 Back     alignment and structure
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A* Length = 503 Back     alignment and structure
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Length = 520 Back     alignment and structure
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Length = 476 Back     alignment and structure
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus} Length = 521 Back     alignment and structure
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A* Length = 523 Back     alignment and structure
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A* Length = 530 Back     alignment and structure
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus} Length = 219 Back     alignment and structure
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A* Length = 501 Back     alignment and structure
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1 Length = 571 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1 Length = 326 Back     alignment and structure
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes} Length = 322 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query539
3js8_A540 Cholesterol oxidase; cholsterol, organic solvent s 100.0
4feh_A481 Oxidoreductase DPRE1; alpha+beta, decaprenylphosph 100.0
2i0k_A561 Oxidoreductase; MIX alpha beta, covalent FAD, flav 100.0
2vfr_A422 Xylitol oxidase, alditol oxidase; FAD, sugar, poly 100.0
2bvf_A459 6-hydroxy-D-nicotine oxidase; autoflavinylation, e 100.0
4bby_A658 Alkyldihydroxyacetonephosphate synthase, peroxiso; 100.0
3pm9_A476 Putative oxidoreductase; putative D-2-hydroxygluta 100.0
3tsh_A500 Pollen allergen PHL P 4; flavoprotein, BI-covalent 100.0
1w1o_A534 Cytokinin dehydrogenase 1; flavin, oxidoreductase, 100.0
3rja_A473 Carbohydrate oxidase; protein-substrate analogue c 100.0
2exr_A524 Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin 99.98
2uuu_A584 Alkyldihydroxyacetonephosphate synthase; transfera 99.98
3fw9_A495 Reticuline oxidase; BI-covalent flavinylation, N-g 99.98
2y3s_A530 TAML; oxidoreductase; HET: FAD TIR; 1.67A {Strepto 99.97
3vte_A518 Tetrahydrocannabinolic acid synthase; BI-covalent 99.97
1zr6_A503 Glucooligosaccharide oxidase; alpha + beta, flavoe 99.97
3pop_A501 GILR oxidase; FAD binding protein, gilvocarcin, gi 99.97
2wdx_A523 Putative hexose oxidase; oxidoreductase-antibiotic 99.97
2ipi_A521 Aclacinomycin oxidoreductase (aknox); anthracyclin 99.97
1e8g_A560 Vanillyl-alcohol oxidase; oxidoreductase, flavoenz 99.96
1wvf_A520 4-cresol dehydrogenase [hydroxylating] flavoprote 99.94
1f0x_A571 DLDH, D-lactate dehydrogenase; oxidoreductase; HET 99.93
3tx1_A322 UDP-N-acetylenolpyruvoylglucosamine reductase; str 99.9
1hsk_A326 UDP-N-acetylenolpyruvoylglucosamine reductase; pep 99.88
1uxy_A340 MURB, uridine diphospho-N-acetylenolpyruvylglucosa 99.87
3i99_A357 UDP-N-acetylenolpyruvoylglucosamine reductase; str 99.87
2gqt_A268 UDP-N-acetylenolpyruvylglucosamine reductase; pept 99.79
2yvs_A219 Glycolate oxidase subunit GLCE; oxidoreductase; 2. 99.74
1ffv_C287 CUTM, flavoprotein of carbon monoxide dehydrogenas 98.28
2w3s_A462 Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2 97.63
1n62_C288 Carbon monoxide dehydrogenase medium chain; CODH, 97.45
3nvz_B305 Xanthine dehydrogenase/oxidase; hydroxylase, homod 96.9
1t3q_C288 Quinoline 2-oxidoreductase medium subunit; QOR, mo 96.79
3hrd_C296 Nicotinate dehydrogenase FAD-subunit; selenium lig 95.68
1rm6_B324 4-hydroxybenzoyl-COA reductase beta subunit; xanth 92.38
1f0x_A571 DLDH, D-lactate dehydrogenase; oxidoreductase; HET 89.85
3unc_A 1332 Xanthine dehydrogenase/oxidase; oxidoreductase; HE 89.05
1wvf_A520 4-cresol dehydrogenase [hydroxylating] flavoprote 85.11
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} Back     alignment and structure
Probab=100.00  E-value=3.5e-68  Score=569.45  Aligned_cols=443  Identities=16%  Similarity=0.205  Sum_probs=338.3

Q ss_pred             ccccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHcCCCeEEEeCCCCCCCCCcccCC---CCcEEEEcC-CCCCce
Q 009245           46 TITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMTKTRIKVATRFSHSIPKLVCPAG---QEGLLISTK-HLNRVL  121 (539)
Q Consensus        46 ~~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~~~~v~v~~ggghs~~~~~~~~~---~~gv~I~l~-~l~~ii  121 (539)
                      .+...|.||++++.+.|.++++|+|++||+++|+.|++++++|+++ |||||+++++++++   .++++|||+ +||+| 
T Consensus        14 ~y~~~~~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~-GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I-   91 (540)
T 3js8_A           14 LYKQSFKNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRAR-GMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAM-   91 (540)
T ss_dssp             CEEEEEECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEE-CSCCCSSCSSCCTTCSSCSEEEEETTTTCCCE-
T ss_pred             hhcceeeccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEE-eCCCCcccccccCCCCCCCeEEEECcCcCCCE-
Confidence            4457789999999999999999999999999999999999999999 89999987776543   368999995 69997 


Q ss_pred             EeeCC--CCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCc---------CCCCccccceeEE
Q 009245          122 KLDVQ--AMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLW---------GRGSSVHDYAVEI  190 (539)
Q Consensus       122 ~id~~--~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~---------~~~g~~~d~V~~~  190 (539)
                      ++|++  .++|+|+||+++.+|.++|.++|+++++.+++..+||||++++|+||++..         .++|.++|+|+++
T Consensus        92 ~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~l  171 (540)
T 3js8_A           92 SIDASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSL  171 (540)
T ss_dssp             EEECSSSSEEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEE
T ss_pred             EECCCCCccEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEE
Confidence            99985  589999999999999999999999999988887799999999999998631         2689999999999


Q ss_pred             EEEccCCCcccceeEEEcCCCcccccccccccccceeeEEeEEEeEEcCcccEEEE-ecCcchHHH-------HHHHhcc
Q 009245          191 RIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLGVISQVTLKLEPLFKRSIAYV-QKSDSDLGD-------QAAIFGH  262 (539)
Q Consensus       191 ~vV~~~G~~~~~~~v~~~~~~~~df~a~~gs~G~lGiIt~vtl~l~p~~~~~~~~~-~~~~~~~~~-------~~~~~~~  262 (539)
                      ++|+++|++..+ .+++++++++||+++++|+|. ||||++|||++|.+++..... ..+.+++.+       .++++++
T Consensus       172 evV~adG~~~~~-~i~~~s~~~~DL~a~r~G~G~-gIVTevtlrl~P~~~l~~~~~~~~~~~e~l~~~~~~~~~~~~~~~  249 (540)
T 3js8_A          172 TAVVYDKASGAY-ALRKFARNDPQIAPLLAHVGR-SLIVEATLQAAPNQRLRCQSWFNIPYGEMFAAAGSGGRTFASYLD  249 (540)
T ss_dssp             EEEEEETTTTEE-EEEEEETTSGGGHHHHTCTTS-SCEEEEEEEEEECCEEEEEEECCSCHHHHTCCSSCCSSCHHHHHH
T ss_pred             EEEcCCCCCcee-eEEEeCCCChhHHHHHhcCCC-eEEEEEEEEEEECCceEEEEEecCCHHHHHhhcccccccHHHHHh
Confidence            999999962111 166777778887677777788 699999999999999876654 357787776       7899999


Q ss_pred             cccceeEEEecCCCceeeeeccccCCCCCCCCc-c---cccCccchhHHHHHHhhhcHHHHhhccccCcccccc-chhhh
Q 009245          263 RHEFADITWYPSQRKAAYRVDDRISSNTSGNGL-Y---NFFPFRPMLSVAMAVVRATEENQESLRDADGKCIGG-KLVTS  337 (539)
Q Consensus       263 ~~~~~~~~w~p~~~~~~~~~~~~~p~~~~~~~~-~---~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~  337 (539)
                      +++|++++|||++++++.+.++..|..+++... .   .+...+..       ...+.+.         .|... ...|.
T Consensus       250 ~~~~~e~~WfP~t~~~~~k~~~~~~~~p~~~~~~~~p~~~~~~d~l-------~~~~~~~---------~~~~~~~~~p~  313 (540)
T 3js8_A          250 SAGRVEAIWFPFTSNPWLKVWTVTPNKPLFSRQTDKPFNYPFSDNL-------PDEVTDL---------ANKILSLGDGK  313 (540)
T ss_dssp             HTSEEEEEECTTCSSCEEEEEEECSSCCTTCEECSSSCCCHHHHSC-------CHHHHHH---------HHHHHTSCCGG
T ss_pred             ccCeEEEEEECCCCceEEEEccCCCCCCCccccccCCccccccccc-------chHHHHH---------HHHHhhcCCcc
Confidence            999999999999999998888776554333211 0   00000000       0000000         01100 01111


Q ss_pred             h---hhhhhcccccCCeeee-cccccccc--ccccccccccccccccccccccCCCcccCcceeeeEEEE--echhHHHH
Q 009245          338 T---LNAFAFGLTNDGVVFA-GYPVIGYQ--NRLQSSGTCLDSAEDSMITGCGWDPRINGEFFHQTTFSV--ALSVVKNF  409 (539)
Q Consensus       338 ~---~~~~~~~~~~~~~~~~-~~~~v~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i--P~~~~~~~  409 (539)
                      .   +..+.++....+...+ ...++||+  ++++.+                    .+..+|.++||+|  |+++++++
T Consensus       314 ~~p~~~~~~~~~~~~~~~~~~~~d~~g~s~~~~~~~~--------------------~~~~r~~~~eyav~~p~~~~~~~  373 (540)
T 3js8_A          314 LTPAFGKAQFAAASAGLVATASWDLWGWSKNLLLYVK--------------------PTTLRVTANGYAVLTRRENVQRV  373 (540)
T ss_dssp             GHHHHHHHHHHHHHHHHHHTTCSEEEEEHHHHHCCCC--------------------TTSCCCEEBCEEEEECGGGHHHH
T ss_pred             cchhHHhHHHHhhhccccccccccccccccceEEEec--------------------CccceeEeeEEeecCcHHHHHHH
Confidence            1   1111111110111111 11356777  666522                    1345789999999  99999999


Q ss_pred             HHHHHHHHHh---CccccccceeeeeEEEEEecCCCCC-----------CCC--CCC-------eEEEEEEEeccCCCCC
Q 009245          410 IQDIQKLVQM---EPKALCGLELYNGIIMRYVKASNAY-----------LGK--QED-------SLDFDIMYYRSKDPMA  466 (539)
Q Consensus       410 l~~v~~~~~~---~~~~~~~~~~~~pi~~Rfv~~d~~~-----------Ls~--~~d-------~~~i~i~~~~~~~~~~  466 (539)
                      |++++++++.   ......++++++|||||++++|+.|           ||+  +|+       +|||++++|+..    
T Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~v~~pvEvR~~~~D~~~~~~~~~~~~p~LS~~~~r~~~p~~d~~~~i~~~~~~~~----  449 (540)
T 3js8_A          374 LNEFVTFYQARVQAYQQQGRYPMNGPVEIRVTGLDDPSEAALSGGVAPALSAIRPRPDHPEWNVAVWLDILTLPGT----  449 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCSCEEEEEECCCCGGGSSSTTCCCCTTCTTCCCTTCTTCCEEEEEEEEECTTC----
T ss_pred             HHHHHHHHHhhhhhhhhccCcccccceEEEEecCCchhhccccccCCcccCccCCCCCCCCcceEEEEEeeecCCC----
Confidence            9999998872   0011134678999999999999999           687  566       999999999854    


Q ss_pred             ccccH-HHHHHHHHHHHhhcCC-----ccccccC-------CCccchhHHHh----C-------CCHHHHHHHHHhcCCC
Q 009245          467 PRLYE-DVLEEIEQLAVFKYGG-----LPHWGKN-------RNLVFDGVIKK----Y-------KNAGEFLKVKQKFDPL  522 (539)
Q Consensus       467 ~~~~~-~~~~~ie~~~~~~~gG-----RPHWgK~-------~~~~~~~l~~~----Y-------P~~~~F~~~r~~~DP~  522 (539)
                      |  ++ +||+++|+++..+|||     ||||||.       |..+.++|++.    |       |+|++|+++|+++||+
T Consensus       450 p--~~~~~~~~~E~~~~~~~~g~~~~~RPhW~K~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~DP~  527 (540)
T 3js8_A          450 P--YANQFYREIEQWIEANFNGSYAAVRPEWSKGWGYTDQAAWADSAMLQTTIPNAFRAGQPAAANWDAAKAALAAYDPY  527 (540)
T ss_dssp             T--THHHHHHHHHHHHHHHSCTTTEEEEECTTSBCSCCSSCTTCCHHHHHTHHHHHTTTTCCGGGSHHHHHHHHHHHCTT
T ss_pred             c--cHHHHHHHHHHHHHHhcCCCccccCcccccccccccccccCCHHHHHhhchhhhccCCCCCCCHHHHHHHHHhcCCC
Confidence            3  55 5999999994444999     9999999       55577889888    9       9999999999999999


Q ss_pred             CCCcchhhhhhc
Q 009245          523 GLFSSEWTDQML  534 (539)
Q Consensus       523 g~F~n~~~~~ll  534 (539)
                      |+|+|+|+++||
T Consensus       528 ~~F~n~~l~~ll  539 (540)
T 3js8_A          528 RLFSSPLLDSLG  539 (540)
T ss_dssp             CCSCCHHHHHHT
T ss_pred             cccCCHHHHHhh
Confidence            999999999987
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A Back     alignment and structure
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A* Back     alignment and structure
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* Back     alignment and structure
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A* Back     alignment and structure
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A* Back     alignment and structure
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Back     alignment and structure
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A* Back     alignment and structure
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* Back     alignment and structure
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A* Back     alignment and structure
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* Back     alignment and structure
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Back     alignment and structure
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A* Back     alignment and structure
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A* Back     alignment and structure
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa} Back     alignment and structure
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A* Back     alignment and structure
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A* Back     alignment and structure
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A* Back     alignment and structure
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus} Back     alignment and structure
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* Back     alignment and structure
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Back     alignment and structure
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1 Back     alignment and structure
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes} Back     alignment and structure
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1 Back     alignment and structure
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A* Back     alignment and structure
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae} Back     alignment and structure
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A* Back     alignment and structure
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus} Back     alignment and structure
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C* Back     alignment and structure
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A* Back     alignment and structure
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C* Back     alignment and structure
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B* Back     alignment and structure
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3 Back     alignment and structure
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Back     alignment and structure
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B* Back     alignment and structure
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1 Back     alignment and structure
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A* Back     alignment and structure
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 539
d2i0ka2216 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibac 3e-13
d1w1oa2206 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Ma 5e-10
d1e8ga2268 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fung 1e-07
d1f0xa2265 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Esche 1e-06
d1uxya1198 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenol 2e-04
d1wvfa2236 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cres 4e-04
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Length = 216 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: FAD-linked oxidases, N-terminal domain
domain: Cholesterol oxidase
species: Brevibacterium sterolicum [TaxId: 1702]

 Score = 67.0 bits (162), Expect = 3e-13
 Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 17/191 (8%)

Query: 60  CKAANVAYPASEQELISIVAAAAMTKTRIKV-ATRFSHSIPKLVCPAGQE--GLLISTKH 116
             A  V  P + Q+++ +   A     +I+        +   +   A  E   L  +  H
Sbjct: 29  LDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTH 88

Query: 117 LNRVLKL-DVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAH--- 172
           LN +         TVT  +G ++  ++ E  K  L     P    L++GG L   AH   
Sbjct: 89  LNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAA 148

Query: 173 ------GSSLWGRGSSVHDYAVEIRIVTPGNPEEEFVNVRVLNESHQDFYAAKVSLGVLG 226
                  +       S+ +   E+  V           +     +        ++     
Sbjct: 149 LPAVGQTTLPGHTYGSLSNLVTELTAVVW---NGTTYALETYQRND-PRITPLLTNLGRC 204

Query: 227 VISQVTLKLEP 237
            ++ VT++  P
Sbjct: 205 FLTSVTMQAGP 215
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Length = 268 Back     information, alignment and structure
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 265 Back     information, alignment and structure
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Length = 236 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query539
d1w1oa2206 Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId 100.0
d1wvfa2236 Flavoprotein subunit of p-cresol methylhydroxylase 99.97
d2i0ka2216 Cholesterol oxidase {Brevibacterium sterolicum [Ta 99.97
d1e8ga2268 Vanillyl-alcohol oxidase {Fungus (Penicillium simp 99.95
d1hska1194 Uridine diphospho-N-Acetylenolpyruvylglucosamine r 99.88
d1uxya1198 Uridine diphospho-N-Acetylenolpyruvylglucosamine r 99.86
d1f0xa2265 D-lactate dehydrogenase {Escherichia coli [TaxId: 99.83
d2i0ka1340 Cholesterol oxidase {Brevibacterium sterolicum [Ta 99.26
d1w1oa1289 Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId 96.97
d1ffvc2177 Carbon monoxide (CO) dehydrogenase flavoprotein, N 96.7
d1v97a6223 Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [ 96.5
d1t3qc2176 Quinoline 2-oxidoreductase medium subunit QorM {Ps 96.22
d1n62c2177 Carbon monoxide (CO) dehydrogenase flavoprotein, N 96.08
d1jroa4167 Xanthine dehydrogenase chain A, domain 3 {Rhodobac 95.71
d1rm6b2216 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, 95.58
d1wvfa1279 Flavoprotein subunit of p-cresol methylhydroxylase 94.53
d1e8ga1287 Vanillyl-alcohol oxidase {Fungus (Penicillium simp 92.42
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: FAD-linked oxidases, N-terminal domain
domain: Cytokinin dehydrogenase 1
species: Maize (Zea mays) [TaxId: 4577]

Probab=100.00  E-value=7.9e-35  Score=276.32  Aligned_cols=191  Identities=21%  Similarity=0.290  Sum_probs=170.1

Q ss_pred             CCeecCCCCCCccccccccCCCCCCCccCccEEEeCCCHHHHHHHHHHHHHc---CCCeEEEeCCCCCCCCCcccCCCCc
Q 009245           33 DPIKCSSNNNSSCTITNSYGMFPDRSVCKAANVAYPASEQELISIVAAAAMT---KTRIKVATRFSHSIPKLVCPAGQEG  109 (539)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~nw~~~~~~~p~~v~~P~s~~ev~~~v~~a~~~---~~~v~v~~ggghs~~~~~~~~~~~g  109 (539)
                      ..|.+++     .......++|.+.....|.+|++|+|++||+++|++|+++   +++|+++ |||||+.+.+..  .++
T Consensus         6 g~v~td~-----~~~~~~~~d~~~~~~~~P~~Vv~P~s~~ev~~iv~~a~~~~~~~~~v~~r-ggGhs~~g~s~~--~~~   77 (206)
T d1w1oa2           6 GKLRTDS-----NATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFR-GRGHSLMGQAFA--PGG   77 (206)
T ss_dssp             TCEECSH-----HHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEE-SSCCCSSSTTCC--TTS
T ss_pred             cEEEcCH-----HHhhhhEECcccCcccCCCEEEEcCCHHHHHHHHHHHHhCCCCCeEEEEE-CCCCCcccCccc--CCC
Confidence            3566653     3444556789888889999999999999999999999997   6899998 789998877654  468


Q ss_pred             EEEEcCCCCCc-----eEeeCCCCEEEEcCCCCHHHHHHHHHHcCCccCCcccccccceeeeeccCCCCCCCcCCCCccc
Q 009245          110 LLISTKHLNRV-----LKLDVQAMTVTVESGVTLRQVIEESAKAGLALPYGPYWWGLTVGGMLGTGAHGSSLWGRGSSVH  184 (539)
Q Consensus       110 v~I~l~~l~~i-----i~id~~~~~vtv~aGv~l~~l~~~l~~~Gl~l~~~~~~~~~tvgG~i~tg~hG~~~~~~~g~~~  184 (539)
                      ++|||++||++     +++|++..+++||||+++.||.++|.++|+.++..++...+||||+++++++|.... +||.++
T Consensus        78 ividl~~l~~i~~~~~~~id~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~~~~~~~~tvGG~i~~~g~g~~s~-~~G~~~  156 (206)
T d1w1oa2          78 VVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAF-RHGPQI  156 (206)
T ss_dssp             EEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHH-HHCCGG
T ss_pred             EeeeccccceeeeceeEEEecCCCEEEEEcceehhhhhhhhhccccccccCCccCceEEeeeeccccceeccc-ccccee
Confidence            99999999998     789999999999999999999999999999999888888899999999999887765 689999


Q ss_pred             cceeEEEEEccCCCcccceeEEEcCC-Cccc-ccccccccccceeeEEeEEEeEEc
Q 009245          185 DYAVEIRIVTPGNPEEEFVNVRVLNE-SHQD-FYAAKVSLGVLGVISQVTLKLEPL  238 (539)
Q Consensus       185 d~V~~~~vV~~~G~~~~~~~v~~~~~-~~~d-f~a~~gs~G~lGiIt~vtl~l~p~  238 (539)
                      |+|+++|+|+++|+      ++++++ +++| |++++|++|+|||||++|||++|+
T Consensus       157 d~v~~~evV~~~G~------~~~~s~~~~~dl~~a~~g~~G~~Giit~~tl~l~PA  206 (206)
T d1w1oa2         157 SNVLEMDVITGHGE------MVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPA  206 (206)
T ss_dssp             GSEEEEEEEETTSC------EEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEEC
T ss_pred             eeeeEEEEEcCCCc------EEEECCCCCHHHHHHHhhCCCccEeEEEEEEEEEcC
Confidence            99999999999999      888876 6788 999999999999999999999995
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Back     information, alignment and structure
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2i0ka1 d.58.32.3 (A:274-613) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Back     information, alignment and structure
>d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Back     information, alignment and structure
>d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]} Back     information, alignment and structure
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Back     information, alignment and structure