Citrus Sinensis ID: 009283

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------54
MASYSSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT
cccHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEEEccccccEEEEEEcccccccEEEEEEccEEEEEEEEccccccEEEcccccccccccccccccccccccccccEEEEEEEcccEEEEEEccccccccccccEEEEEEEcccccccccccccccEEEEEcccccccHHHHHHHHccccccccccEEEEccccccccEEEEEcccEEEEEEEEccccccEEEEEcccEEEEEEEEcccccEEEEcEEEEccccEEEEEEEEcccccccEEEEEcccccccccEEEEEEcccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccEEEEEcccccccccEEEEEEcccccccccccHHHHHHcccccccccccccccccccccccccEEEEcccccEEEEEEEccccccccccccccccEEEEEccccccccccccccccccccccEEEEccccEEEEEEEcccccccHHHHccHHHHHcccEEEEEEEcccccccccccccHHHHHHHHcccccc
cHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccccccccccEEEEEcccccccEEEEEcccEEEEEEEEcccccEEEEEcHHHHcccccccccEEccccccccccEEEEEEEEcccEEEEHHHHHHHHHHccccEEEEEcccccccccccEccHHHEEEEEEEccccHHHccccccccEEEEccEccEcccccccccEEEEccccEEEEEEEEccccccEEEEEccccEEEEEEccEEEEEEEEcEEEEccccEEEEEEEccccccEEEEEEEEcccccccEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccEEEEEEEccccccccccccccccEEEEEEEcEEEcccccHHHHHHHcccccEEEccccccccccccccccccEEEEEcccEEEEEEEccccccccEEEccEEEEEEEccccccccccccccccccccccccEEcccccEEEEEEEcccccEHEEEHHHHHHHHHccEEEEEEEccccccccccccccccccccccccccc
MASYSSICCLLLVFMLVSctrgespyrffnwnvtygdiyplgvkqqgilingqfpgpsieavtndnlIISVFNaldepflisWNGVQQRrnswqdgvygtncpippgknfTYVLQVKDqigsyfyfpslafhkaaggyggikiasrplipvpfdppagdftilagdwykkNHTDLKAILdsgsdlpfpdglvingrgsnantftvdqgktyrfrisnvgistsiNFRIQGHKMLLVEVEgthtlqntydsldihlgQSYSVLvradqppqgyyIVISTRFTSQVLSATSVLhysnsagsvsgpppggpttqiDWSLEQARSLRRnltasgprpnpqgsyhyglintthtirlqntaptingkqryavnsvsfipadtplkladyfkipgvfsvgsipdnptgggaylQTSVMAADFRGFAevvfenpedtlqswhidghnffavgmdggewtpasrltynlrdtisrctvqvypkswtavyvpldnvgmwnirsENWARQYLGQQFYLRVYSSanswrdeypipsnallcgravghrt
masyssicCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVIngrgsnantftvdqgktyrFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNsagsvsgpppGGPTTQIDWSLEQARSLRRNLtasgprpnpqgSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCtvqvypkswtavyvPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRdeypipsnallcgravghrt
MASYSSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHkaaggyggikiaSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYsnsagsvsgpppggpTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT
****SSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHY*********************************************YHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRA*****
****SSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSS*********IPSNALLCGRA*****
MASYSSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSN************PTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT
MASYSSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRA*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASYSSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query538 2.2.26 [Sep-21-2011]
Q00624555 L-ascorbate oxidase homol N/A no 0.944 0.915 0.559 1e-161
P29162554 L-ascorbate oxidase homol N/A no 0.983 0.954 0.522 1e-161
Q9SU40587 Monocopper oxidase-like p no no 0.972 0.890 0.501 1e-151
Q9FHN6592 Monocopper oxidase-like p no no 0.940 0.854 0.493 1e-142
Q8VXX5589 Monocopper oxidase-like p no no 0.981 0.896 0.488 1e-140
Q0IQU1564 Laccase-22 OS=Oryza sativ no no 0.877 0.836 0.303 6e-49
Q1PDH6566 Laccase-16 OS=Arabidopsis no no 0.882 0.839 0.301 8e-46
Q40588578 L-ascorbate oxidase OS=Ni N/A no 0.899 0.837 0.280 7e-45
P24792579 L-ascorbate oxidase OS=Cu N/A no 0.933 0.867 0.273 2e-44
Q8RYM9562 Laccase-2 OS=Oryza sativa no no 0.918 0.879 0.283 4e-44
>sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 Back     alignment and function desciption
 Score =  570 bits (1469), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 290/518 (55%), Positives = 358/518 (69%), Gaps = 10/518 (1%)

Query: 23  ESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLIS 82
           E PY    WNVTYG   PLGV QQ ILINGQFPGP+I + +N+N+II+VFN LDEPFL++
Sbjct: 24  EDPYFHHVWNVTYGTASPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPFLLT 83

Query: 83  WNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIK 142
           WNG+Q R+N WQDG  GT CPI PG N+TY  Q KDQIGSYFY+P+   H+AAGGYGG++
Sbjct: 84  WNGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPTTGMHRAAGGYGGLR 143

Query: 143 IASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDGLVINGR-----G 197
           + SR LIPVP+  P  D+T+L GDWY K+HT LK  LD G  +  PDG+VING+     G
Sbjct: 144 VNSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDGGRTIGRPDGIVINGKSGKGDG 203

Query: 198 SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQ 257
           S+A  FT+  GKTYR RI NVG+ TSINFRIQ HKM LVE+EG+H LQN YDSLD+H+GQ
Sbjct: 204 SDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQ 263

Query: 258 SYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLE 317
            +  +V A+Q P+ YY+V S+RF   V++ T +L Y    G  S   P GP     WSL 
Sbjct: 264 CFGTIVTANQEPKDYYMVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGPVGWA-WSLN 322

Query: 318 QARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADT 377
           Q RS R NLTAS  RPNPQGSYHYG IN T TI+L NT   ++GK R+A+N VS    +T
Sbjct: 323 QFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHTEPET 382

Query: 378 PLKLADYFKIP-GVFSVGSIPDNPTG---GGAYLQTSVMAADFRGFAEVVFENPEDTLQS 433
           PLKLA+YF I   VF   +I D+PT        ++ +V+    R F EVVFEN E ++QS
Sbjct: 383 PLKLAEYFGISDKVFKYDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQS 442

Query: 434 WHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIR 493
           WH+DG++FF+V ++ G WTP  R  YNL D +SR TVQVYPK W A+ +  DN GMWN+R
Sbjct: 443 WHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVR 502

Query: 494 SENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCG 531
           SEN  R+YLGQQ Y  V S   S RDEY +P  +L CG
Sbjct: 503 SENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCG 540
Probable oxidase that may be involved in pollen tube growth.
Brassica napus (taxid: 3708)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: -
>sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 Back     alignment and function description
>sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 Back     alignment and function description
>sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 Back     alignment and function description
>sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 Back     alignment and function description
>sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 Back     alignment and function description
>sp|Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 Back     alignment and function description
>sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 Back     alignment and function description
>sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query538
224064972545 predicted protein [Populus trichocarpa] 0.981 0.968 0.873 0.0
255567689538 multicopper oxidase, putative [Ricinus c 0.977 0.977 0.874 0.0
225447041541 PREDICTED: L-ascorbate oxidase homolog [ 1.0 0.994 0.881 0.0
224128966532 predicted protein [Populus trichocarpa] 0.977 0.988 0.863 0.0
449519497543 PREDICTED: L-ascorbate oxidase homolog [ 1.0 0.990 0.842 0.0
357471325538 L-ascorbate oxidase-like protein [Medica 0.966 0.966 0.871 0.0
449453507543 PREDICTED: L-ascorbate oxidase homolog [ 1.0 0.990 0.840 0.0
356543694536 PREDICTED: L-ascorbate oxidase homolog [ 0.964 0.968 0.878 0.0
357453363539 L-ascorbate oxidase-like protein [Medica 0.964 0.962 0.874 0.0
356517653537 PREDICTED: L-ascorbate oxidase homolog [ 0.996 0.998 0.824 0.0
>gi|224064972|ref|XP_002301616.1| predicted protein [Populus trichocarpa] gi|222843342|gb|EEE80889.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  974 bits (2519), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/528 (87%), Positives = 495/528 (93%)

Query: 11  LLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIIS 70
           L+V +LVSCT GE PYRF+ WNVTYGDIYPLGVKQQGILING+FPGP IE+VTNDNLIIS
Sbjct: 15  LVVLLLVSCTIGEDPYRFYTWNVTYGDIYPLGVKQQGILINGKFPGPQIESVTNDNLIIS 74

Query: 71  VFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLA 130
           VFN+LDEPFL+SWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 
Sbjct: 75  VFNSLDEPFLLSWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLG 134

Query: 131 FHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPDG 190
            HKAAGG+GG KIASR +IPVPF PPAGDFTILAGDW+KKNHTDLKAILD GSDLPFPDG
Sbjct: 135 MHKAAGGFGGFKIASRSVIPVPFPPPAGDFTILAGDWFKKNHTDLKAILDGGSDLPFPDG 194

Query: 191 LVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDS 250
           L+INGRGSN  TFTVDQGKTYR RISNVG++TSINFRIQGHKMLLVEVEGTH+LQNTYDS
Sbjct: 195 LLINGRGSNGYTFTVDQGKTYRLRISNVGLTTSINFRIQGHKMLLVEVEGTHSLQNTYDS 254

Query: 251 LDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTT 310
           LDIHLGQSYSVLV ADQ  Q Y+IV+STRFTSQVL+ TS+LHYSNSAGSVS  PP GPT 
Sbjct: 255 LDIHLGQSYSVLVTADQAAQDYFIVVSTRFTSQVLTTTSILHYSNSAGSVSDSPPSGPTI 314

Query: 311 QIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSV 370
           Q+DWS+EQARSLRRNLTASGPRPNPQGSYHYGLINTTHT+RLQN+AP INGKQRYAVNSV
Sbjct: 315 QLDWSVEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTVRLQNSAPIINGKQRYAVNSV 374

Query: 371 SFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEVVFENPEDT 430
           SFIPADTPLKLAD+F IPGVFS+GSI +NPTGGGAY QTSVMAADFRG+AE+VFENPED 
Sbjct: 375 SFIPADTPLKLADHFNIPGVFSLGSISNNPTGGGAYRQTSVMAADFRGYAEIVFENPEDN 434

Query: 431 LQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMW 490
           +QSWHIDGHNFF VGMDGG+W+PASRLTYNLRDTISRCTVQVYP+SWTAVY+PLDNVGMW
Sbjct: 435 VQSWHIDGHNFFVVGMDGGQWSPASRLTYNLRDTISRCTVQVYPESWTAVYMPLDNVGMW 494

Query: 491 NIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 538
           N+RSENWARQYLGQQFYLRVYS ANSWRDEYPIP+NALLCGRA G  T
Sbjct: 495 NVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPTNALLCGRAAGRLT 542

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255567689|ref|XP_002524823.1| multicopper oxidase, putative [Ricinus communis] gi|223535883|gb|EEF37543.1| multicopper oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225447041|ref|XP_002269614.1| PREDICTED: L-ascorbate oxidase homolog [Vitis vinifera] gi|297739160|emb|CBI28811.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224128966|ref|XP_002320467.1| predicted protein [Populus trichocarpa] gi|222861240|gb|EEE98782.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449519497|ref|XP_004166771.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|357471325|ref|XP_003605947.1| L-ascorbate oxidase-like protein [Medicago truncatula] gi|355507002|gb|AES88144.1| L-ascorbate oxidase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449453507|ref|XP_004144498.1| PREDICTED: L-ascorbate oxidase homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|356543694|ref|XP_003540295.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] Back     alignment and taxonomy information
>gi|357453363|ref|XP_003596958.1| L-ascorbate oxidase-like protein [Medicago truncatula] gi|124360517|gb|ABN08527.1| Multicopper oxidase, type 1 [Medicago truncatula] gi|355486006|gb|AES67209.1| L-ascorbate oxidase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356517653|ref|XP_003527501.1| PREDICTED: L-ascorbate oxidase homolog [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query538
TAIR|locus:2120648541 sks4 "SKU5 similar 4" [Arabido 0.983 0.977 0.7 2.4e-209
TAIR|locus:2199798541 sks5 "SKU5 similar 5" [Arabido 0.998 0.992 0.666 4.9e-204
TAIR|locus:2033513542 SKS6 "SKU5-similar 6" [Arabido 0.981 0.974 0.657 3.4e-196
TAIR|locus:2036911551 sks8 "SKU5 similar 8" [Arabido 0.992 0.969 0.641 6.3e-195
TAIR|locus:2201133538 sks7 "SKU5 similar 7" [Arabido 0.972 0.972 0.643 3.7e-190
TAIR|locus:2121823549 sks9 "SKU5 similar 9" [Arabido 0.983 0.963 0.620 4.1e-184
TAIR|locus:2132927547 sks10 "SKU5 similar 10" [Arabi 0.972 0.956 0.584 5.6e-171
TAIR|locus:2174954546 sks17 "SKU5 similar 17" [Arabi 0.972 0.957 0.551 1.1e-160
TAIR|locus:2092865551 sks13 "SKU5 similar 13" [Arabi 0.975 0.952 0.540 2.3e-151
TAIR|locus:2092845554 sks11 "SKU5 similar 11" [Arabi 0.977 0.949 0.531 1.4e-149
TAIR|locus:2120648 sks4 "SKU5 similar 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2024 (717.5 bits), Expect = 2.4e-209, P = 2.4e-209
 Identities = 371/530 (70%), Positives = 432/530 (81%)

Query:    10 LLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLII 69
             ++L+ +L++   G++PYRFF W +TYGDIYPLGVKQQGILINGQFPGP I+A+TNDN+II
Sbjct:     9 IVLLLVLINGVLGDNPYRFFTWKITYGDIYPLGVKQQGILINGQFPGPHIDAITNDNIII 68

Query:    70 SVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSL 129
             SVFN L EPFLISWNGVQQR+NSWQDGV GT CPIPPGKNFTYV+QVKDQIGS++YFPSL
Sbjct:    69 SVFNYLKEPFLISWNGVQQRKNSWQDGVVGTTCPIPPGKNFTYVIQVKDQIGSFYYFPSL 128

Query:   130 AFHXXXXXXXXXXXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSDLPFPD 189
             AFH            SRP IPVPF PP GDF +LAGDWYK NH  L+ +L++G +LP PD
Sbjct:   129 AFHKAAGAFGAIRVWSRPRIPVPFSPPDGDFWLLAGDWYKTNHYVLRRLLEAGRNLPNPD 188

Query:   190 GLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYD 249
             G++INGRG   NTFTV  GKTYRFRISNVG++TS+NFRIQGH M LVEVEG+HT+QN Y 
Sbjct:   189 GVLINGRGWGGNTFTVQPGKTYRFRISNVGVATSLNFRIQGHTMKLVEVEGSHTVQNIYT 248

Query:   250 SLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXT 309
             SLDIHLGQSYSVLV A+Q PQ YYIVIS+RFT +VL+ TS+LHY               T
Sbjct:   249 SLDIHLGQSYSVLVTANQAPQDYYIVISSRFTRKVLTTTSILHYSNSRKGVSGPVPNGPT 308

Query:   310 TQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNS 369
               I  SL QAR++RRNLTASGPRPNPQGSYHYGLI    TI L N+AP INGKQRYAVN 
Sbjct:   309 LDIASSLYQARTIRRNLTASGPRPNPQGSYHYGLIKPGRTIILANSAPWINGKQRYAVNG 368

Query:   370 VSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGG-GAYLQTSVMAADFRGFAEVVFENPE 428
              SF+  DTPLKLADYFKIPGVF++GSIP +P+GG G YLQ+SVMAA+FR F EVVF+N E
Sbjct:   369 ASFVAPDTPLKLADYFKIPGVFNLGSIPTSPSGGNGGYLQSSVMAANFREFIEVVFQNWE 428

Query:   429 DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG 488
             +++QSWH+ G++FF VGMDGG+WTP SR  YNLRD +SR TVQVYP++WTA+Y+ LDNVG
Sbjct:   429 NSVQSWHVSGYSFFVVGMDGGQWTPGSRAKYNLRDAVSRSTVQVYPRAWTAIYIALDNVG 488

Query:   489 MWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 538
             MWNIRSENWARQYLGQQFYLRVY+S+ S+RDEYP P NAL+CGRA G  T
Sbjct:   489 MWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALMCGRAKGRHT 538
GO:0005507 "copper ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0016020 "membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0000271 "polysaccharide biosynthetic process" evidence=RCA
GO:0009825 "multidimensional cell growth" evidence=RCA
GO:0009932 "cell tip growth" evidence=RCA
GO:0010075 "regulation of meristem growth" evidence=RCA
GO:0010817 "regulation of hormone levels" evidence=RCA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA
GO:0048653 "anther development" evidence=RCA
GO:0048767 "root hair elongation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2199798 sks5 "SKU5 similar 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033513 SKS6 "SKU5-similar 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036911 sks8 "SKU5 similar 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201133 sks7 "SKU5 similar 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121823 sks9 "SKU5 similar 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132927 sks10 "SKU5 similar 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174954 sks17 "SKU5 similar 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092865 sks13 "SKU5 similar 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092845 sks11 "SKU5 similar 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P29162ASOL_TOBAC1, ., 1, 0, ., 3, ., -0.52210.98320.9548N/Ano
Q00624ASOL_BRANA1, ., 1, 0, ., 3, ., -0.55980.94420.9153N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.10.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query538
PLN02991543 PLN02991, PLN02991, oxidoreductase 0.0
PLN02835539 PLN02835, PLN02835, oxidoreductase 0.0
PLN02792536 PLN02792, PLN02792, oxidoreductase 0.0
PLN02354552 PLN02354, PLN02354, copper ion binding / oxidoredu 0.0
PLN02168545 PLN02168, PLN02168, copper ion binding / pectinest 0.0
PLN00044596 PLN00044, PLN00044, multi-copper oxidase-related p 0.0
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 8e-69
PLN02191574 PLN02191, PLN02191, L-ascorbate oxidase 1e-60
PLN02604566 PLN02604, PLN02604, oxidoreductase 9e-60
TIGR03389539 TIGR03389, laccase, laccase, plant 5e-54
pfam00394146 pfam00394, Cu-oxidase, Multicopper oxidase 4e-48
pfam07732119 pfam07732, Cu-oxidase_3, Multicopper oxidase 2e-44
pfam07731135 pfam07731, Cu-oxidase_2, Multicopper oxidase 8e-31
TIGR03390538 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu 9e-26
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 2e-23
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 2e-16
>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase Back     alignment and domain information 
 Score =  805 bits (2079), Expect = 0.0
 Identities = 366/536 (68%), Positives = 435/536 (81%), Gaps = 2/536 (0%)

Query: 3   SYSSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAV 62
           S ++   +L +  L+S    E PYRFF W+VTYG+I PLGV QQGILING+FPGP I +V
Sbjct: 5   SVNTTAMILGLLFLISFVAAEDPYRFFEWHVTYGNISPLGVAQQGILINGKFPGPDIISV 64

Query: 63  TNDNLIISVFNALDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGS 122
           TNDNLII+VFN LDEPFLISW+G++  RNS+QDGVYGT CPIPPGKN+TY LQVKDQIGS
Sbjct: 65  TNDNLIINVFNHLDEPFLISWSGIRNWRNSYQDGVYGTTCPIPPGKNYTYALQVKDQIGS 124

Query: 123 YFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSG 182
           ++YFPSL FHKAAGG+G I+I+SRPLIPVPF  PA D+T+L GDWYK NH DL+A LD+G
Sbjct: 125 FYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLDNG 184

Query: 183 SDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTH 242
             LP PDG++INGRGS A T  ++ GKTYR RISNVG+  S+NFRIQ H M LVEVEGTH
Sbjct: 185 GKLPLPDGILINGRGSGA-TLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTH 243

Query: 243 TLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSG 302
           T+Q  + SLD+H+GQSYSVL+ ADQP + YYIV+S+RFTS++L  T VLHYSNSAG VSG
Sbjct: 244 TIQTPFSSLDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILITTGVLHYSNSAGPVSG 303

Query: 303 PPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGK 362
           P P GP  Q+ WS +QAR+++ NLTASGPRPNPQGSYHYG IN T TIRL N+A  I GK
Sbjct: 304 PIPDGPI-QLSWSFDQARAIKTNLTASGPRPNPQGSYHYGKINITRTIRLANSAGNIEGK 362

Query: 363 QRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGGGAYLQTSVMAADFRGFAEV 422
           QRYAVNS SF PADTPLKLADYFKI GV++ GSIPD PT G  +  TSVM  D++ F E+
Sbjct: 363 QRYAVNSASFYPADTPLKLADYFKIAGVYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEI 422

Query: 423 VFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYV 482
           VFEN ED +Q+WH+DG++F+ VGM+ G+W+ ASR  YNL D +SRCTVQVYP+SWTA+YV
Sbjct: 423 VFENWEDIVQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYV 482

Query: 483 PLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVGHRT 538
            LDNVGMWN+RSE W RQYLGQQFY+RVY+++ S RDEY IP NALLCGRA GH T
Sbjct: 483 SLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATGHHT 538

Length = 543
>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase Back     alignment and domain information
>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase Back     alignment and domain information
>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase Back     alignment and domain information
>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase Back     alignment and domain information
>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|234194 TIGR03389, laccase, laccase, plant Back     alignment and domain information
>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 538
PLN02835539 oxidoreductase 100.0
PLN02991543 oxidoreductase 100.0
PLN02354552 copper ion binding / oxidoreductase 100.0
PLN00044596 multi-copper oxidase-related protein; Provisional 100.0
PLN02792536 oxidoreductase 100.0
PLN02168545 copper ion binding / pectinesterase 100.0
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 100.0
TIGR03389539 laccase laccase, plant. Members of this protein fa 100.0
PLN02604566 oxidoreductase 100.0
PLN02191574 L-ascorbate oxidase 100.0
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 100.0
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 100.0
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 100.0
PRK10965523 multicopper oxidase; Provisional 100.0
PRK10883471 FtsI repressor; Provisional 100.0
COG2132451 SufI Putative multicopper oxidases [Secondary meta 100.0
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 100.0
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 100.0
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 99.97
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 99.94
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 99.78
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.7
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 99.67
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 99.45
PRK10965523 multicopper oxidase; Provisional 99.23
TIGR03389 539 laccase laccase, plant. Members of this protein fa 99.21
PLN02835 539 oxidoreductase 99.17
PRK10883471 FtsI repressor; Provisional 99.1
PLN02354 552 copper ion binding / oxidoreductase 99.09
PLN02792 536 oxidoreductase 99.08
TIGR03390 538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 99.06
PLN02991 543 oxidoreductase 99.06
PLN02168 545 copper ion binding / pectinesterase 99.04
PLN00044 596 multi-copper oxidase-related protein; Provisional 98.95
COG2132451 SufI Putative multicopper oxidases [Secondary meta 98.93
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 98.89
TIGR03388 541 ascorbase L-ascorbate oxidase, plant type. Members 98.89
PLN02604 566 oxidoreductase 98.87
PLN02191 574 L-ascorbate oxidase 98.79
PRK02710119 plastocyanin; Provisional 98.73
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 98.67
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 98.64
KOG1263 563 consensus Multicopper oxidases [Secondary metaboli 98.45
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 98.35
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 98.19
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 98.09
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 98.06
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 98.03
PRK02888635 nitrous-oxide reductase; Validated 98.02
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 97.89
TIGR0265783 amicyanin amicyanin. Members of this family are am 97.86
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 97.76
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 97.52
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 97.44
COG3794128 PetE Plastocyanin [Energy production and conversio 97.25
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 96.97
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 96.83
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 96.66
COG4454158 Uncharacterized copper-binding protein [Inorganic 96.2
PRK02710119 plastocyanin; Provisional 96.15
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 96.11
PRK10378375 inactive ferrous ion transporter periplasmic prote 95.73
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 95.67
PRK02888635 nitrous-oxide reductase; Validated 95.64
TIGR0265783 amicyanin amicyanin. Members of this family are am 94.54
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 94.48
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 94.39
COG4454158 Uncharacterized copper-binding protein [Inorganic 94.3
TIGR02695125 azurin azurin. Azurin is a blue copper-binding pro 92.92
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 92.61
COG3794128 PetE Plastocyanin [Energy production and conversio 92.27
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 92.2
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 90.16
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 87.91
COG1622247 CyoA Heme/copper-type cytochrome/quinol oxidases, 85.42
TIGR03079399 CH4_NH3mon_ox_B methane monooxygenase/ammonia mono 83.34
COG4263637 NosZ Nitrous oxide reductase [Energy production an 82.66
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 81.61
>PLN02835 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=1.9e-112  Score=906.08  Aligned_cols=530  Identities=63%  Similarity=1.105  Sum_probs=432.0

Q ss_pred             hhhHHHHHHHHHHHhccccCCCeEEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCCCCceeee
Q 009283            4 YSSICCLLLVFMLVSCTRGESPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALDEPFLISW   83 (538)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~~~~siH~   83 (538)
                      +++||+++.++-..++..+.+++|+|+|++++..+.+||+++++|+|||++|||+|++++||+|+|+|+|+|+++|+|||
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~v~~~~~~~dg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~L~~~ttiHW   86 (539)
T PLN02835          7 LHLLLGVLAVLSSVSLVNGEDPYKYYTWTVTYGTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLDQPFLLTW   86 (539)
T ss_pred             HHHHHHHHHHHHHHhhhhccCcEEEEEEEEEEEEeccCCeEEEEEEECCcCCCCCEEEECCCEEEEEEEeCCCCCCcEEe
Confidence            56677744433333455666789999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCCCCCCCCCCCceEEE
Q 009283           84 NGVQQRRNSWQDGVYGTNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTIL  163 (538)
Q Consensus        84 HG~~~~~~~~~DG~~~tq~~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~  163 (538)
                      ||++|+.++++||+++|||||+||++|+|+|++++++||||||||++.|+.+||+|+|||++++..+.+++.+|+|++++
T Consensus        87 HGl~~~~~~~~DGv~~tQ~pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~e~~l~  166 (539)
T PLN02835         87 NGIKQRKNSWQDGVLGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLL  166 (539)
T ss_pred             CCcccCCCCCCCCCccCcCCCCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCCCCCCceEEEE
Confidence            99999999999999999999999999999999867899999999999999999999999987655555666779999999


Q ss_pred             EeeecccChhhHHHHhccCCCCCCCCeEEEcCCCCCCceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEEEEcCeec
Q 009283          164 AGDWYKKNHTDLKAILDSGSDLPFPDGLVINGRGSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHT  243 (538)
Q Consensus       164 l~d~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~  243 (538)
                      ++||++.....+...+..+...+.++.+||||+.  .+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus       167 l~Dw~~~~~~~~~~~~~~g~~~~~~d~~liNG~~--~~~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~v  244 (539)
T PLN02835        167 VGDWYKTSHKTLQQRLDSGKVLPFPDGVLINGQT--QSTFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHT  244 (539)
T ss_pred             eeccccCCHHHHHHHhhcCCCCCCCceEEEcccc--CceEEECCCCEEEEEEEEcCCCccEEEEECCCEEEEEEECCccC
Confidence            9999999876665555566566788999999999  78999999999999999999999999999999999999999999


Q ss_pred             ccceecEEEEcCCCeEEEEEEeCCCCcceEEEEEeeccCCccceEEEEEecCCCCCCCCCCCCCCCccccchhhhhhhhc
Q 009283          244 LQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYSNSAGSVSGPPPGGPTTQIDWSLEQARSLR  323 (538)
Q Consensus       244 ~p~~~~~v~l~pgeR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~P~~~~~~~~~~~~~~~  323 (538)
                      +|..++++.|++||||||+|++++++|+|||++...+........|+|+|.++..+.+.+.|..|..+.......+....
T Consensus       245 ~p~~~~~l~i~~GqRydvlv~~~~~~g~y~i~a~~~~~~~~~~~~ail~Y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~  324 (539)
T PLN02835        245 IQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHWSMRQARTYR  324 (539)
T ss_pred             CCceeeEEEECcCceEEEEEEcCCCCCcEEEEEEccccCCCcceEEEEEECCCCCCCCCCCCCCCccccccccchhhccc
Confidence            99999999999999999999999888999999865443344678999999886533333344333211111222222222


Q ss_pred             ccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCCCCCCCC
Q 009283          324 RNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPDNPTGG  403 (538)
Q Consensus       324 ~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~~~p~~~  403 (538)
                      ..+......+.+..+........++++.+.......+|...|++||++|..|++|+|++.++..++.|+.++....+.+.
T Consensus       325 ~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~iN~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~  404 (539)
T PLN02835        325 WNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQSLPSGG  404 (539)
T ss_pred             cccCccccCCCCCccccccccCCCceEEEeccccccCCeEEEEECCcccCCCCCChhhhhhhcCCCccccCccccCCCCC
Confidence            22333333333322221222223445444322222356688999999999899999887766667777755433334433


Q ss_pred             CcceeeEEEEccCCcEEEEEEEcCCCCCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEE
Q 009283          404 GAYLQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVP  483 (538)
Q Consensus       404 ~~~~~~~~~~~~~g~~v~~~l~N~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~  483 (538)
                      ..+.++.++.++.|++|||+|+|.+...||||||||+||||++|.|.|++.....+|+.+|.+|||+.|+++||++|||+
T Consensus       405 ~~~~~t~~~~~~~~~~Veivi~N~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP~~RDTv~vp~~gw~~IrF~  484 (539)
T PLN02835        405 PAFVATSVMQTSLHDFLEVVFQNNEKTMQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVS  484 (539)
T ss_pred             ccccCCeEEEcCCCCEEEEEEECCCCCCCCCCCCCccEEEEeccCCCCCcccccccCCCCCCccceEEeCCCCEEEEEEE
Confidence            45567889999999999999999988899999999999999999998876655568899999999999999999999999


Q ss_pred             ccCcceeeeeecchhhhhcceEEEEEEecCCCcCCccCCCCCchhccccccC
Q 009283          484 LDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAVG  535 (538)
Q Consensus       484 adnpG~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~~~  535 (538)
                      +||||.|+|||||++|+..||+++|.|.++.+...+++++|+++++||..++
T Consensus       485 aDNPG~Wl~HCHi~~H~~~Gm~~~~~V~~~~~~~~~~~~~P~~~~~Cg~~~~  536 (539)
T PLN02835        485 LDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIG  536 (539)
T ss_pred             CcCCEEeeeeecchhhhhcccEEEEEEccCCCccccccCCCccccccccCcc
Confidence            9999999999999999999999999999876665677899999999998776

>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02695 azurin azurin Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>COG3794 PetE Plastocyanin [Energy production and conversion] Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>COG1622 CyoA Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion] Back     alignment and domain information
>TIGR03079 CH4_NH3mon_ox_B methane monooxygenase/ammonia monooxygenase, subunit B Back     alignment and domain information
>COG4263 NosZ Nitrous oxide reductase [Energy production and conversion] Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query538
1aoz_A552 Refined Crystal Structure Of Ascorbate Oxidase At 1 8e-39
1hfu_A503 Type-2 Cu-Depleted Laccase From Coprinus Cinereus A 3e-25
1a65_A504 Type-2 Cu-depleted Laccase From Coprinus Cinereus L 3e-25
4a2f_A497 Coriolopsis Gallica Laccase Collected At 12.65 Kev 3e-23
4a2d_A496 Coriolopsis Gallica Laccase T2 Copper Depleted At P 3e-23
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 3e-22
3t6v_A495 Crystal Structure Of Laccase From Steccherinum Ochr 6e-22
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 1e-21
2hrg_A496 Crystal Structure Of Blue Laccase From Trametes Tro 1e-21
3fpx_A499 Native Fungus Laccase From Trametes Hirsuta Length 2e-21
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 5e-21
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 1e-20
2qt6_A498 Crystal Structure Determination Of A Blue Laccase F 2e-20
1gyc_A499 Crystal Structure Determination At Room Temperature 5e-20
2xyb_A497 Crystal Structure Of A Fully Functional Laccase Fro 6e-20
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 6e-19
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 7e-18
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 7e-18
1gw0_A559 Crystal Structure Of Laccase From Melanocarpus Albo 4e-17
3dkh_A559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 4e-17
2q9o_A559 Near-Atomic Resolution Structure Of A Melanocarpus 6e-17
1zpu_A534 Crystal Structure Of Fet3p, A Multicopper Oxidase T 7e-16
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 1e-15
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 2e-14
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 7e-13
3g5w_A318 Crystal Structure Of Blue Copper Oxidase From Nitro 7e-06
3zx1_A481 Multicopper Oxidase From Campylobacter Jejuni: A Me 1e-05
2xu9_A439 Crystal Structure Of Laccase From Thermus Thermophi 3e-04
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  158 bits (399), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 148/555 (26%), Positives = 227/555 (40%), Gaps = 63/555 (11%)
Query: 24  SPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLIS 82
           S  R + W V Y    P   +   + INGQFPGP+I A   D++++ + N L  E  +I 
Sbjct: 1   SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIH 60
Query: 83  WNGVQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHXXXXXXXXX 141
           W+G+ QR   W DG    + C I PG+ F Y   V D  G++FY   L            
Sbjct: 61  WHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSL 119
Query: 142 XXXSRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGSD--LPFPDGLVINGRG-- 197
                     PF    G+  +L  DW+ ++    +  L S     +  P  +++NGRG  
Sbjct: 120 IVDPPQGKKEPFHY-DGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQF 178
Query: 198 ---------SNAN-------------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLL 235
                    SN                F V   KTYR RI++     ++NF I  H++L+
Sbjct: 179 DCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238
Query: 236 VEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTRFTS-QVLSATSVLHY 293
           VE +G +        +DI+ G+SYSVL+  DQ P + Y++ + TR          ++L+Y
Sbjct: 239 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNY 298
Query: 294 XXXXXXXXXXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQ 353
                          T   D   +++++    +TA+   P P        +     I L 
Sbjct: 299 LPNSVSKLPTSPPPQTPAWD-DFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFLL 350
Query: 354 NTAPTINGKQRYAVNSVSFIPADTP---------LKLADYFKIPGVFSVGSIPDNP---- 400
           NT   ING  ++A+N VS     TP         L   D    P VF      D P    
Sbjct: 351 NTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNE 410
Query: 401 ---TGGGAY-LQTSVMAADFRGFAEVVFENPEDTLQSWHIDGHNFFAVGMDGGEWTPASR 456
               G G Y  +   +       A ++ EN  +T   WH+ GH+F+ +G   G+++    
Sbjct: 411 KTRIGNGVYQFKIGEVVDVILQNANMMKENLSET-HPWHLHGHDFWVLGYGDGKFSAEEE 469
Query: 457 LTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANS 516
            + NL++   R TV ++P  WTA+    DN G+W          ++G          A  
Sbjct: 470 SSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF-----AEG 524
Query: 517 WRDEYPIPSNALLCG 531
                 IP+ AL CG
Sbjct: 525 VEKVGRIPTKALACG 539
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 Back     alignment and structure
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 Back     alignment and structure
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 Back     alignment and structure
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 Back     alignment and structure
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 Back     alignment and structure
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 Back     alignment and structure
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 Back     alignment and structure
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 Back     alignment and structure
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 Back     alignment and structure
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 Back     alignment and structure
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query538
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 0.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 2e-90
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 7e-82
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 1e-79
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 2e-79
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 2e-78
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 1e-76
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 4e-71
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 1e-55
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 5e-54
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 1e-39
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 2e-32
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 1e-27
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 1e-25
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 4e-24
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 2e-23
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 9e-22
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 7e-21
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 5e-12
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 1e-20
2zoo_A442 Probable nitrite reductase; electron transfer, ele 2e-20
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 4e-20
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 3e-19
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 2e-05
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 1e-17
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 3e-17
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 4e-15
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 6e-17
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 7e-17
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 1e-16
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 3e-13
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 5e-13
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 4e-11
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 8e-11
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 2e-08
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 Back     alignment and structure
 Score =  539 bits (1390), Expect = 0.0
 Identities = 144/556 (25%), Positives = 230/556 (41%), Gaps = 61/556 (10%)

Query: 27  RFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNAL-DEPFLISWNG 85
           R + W V Y    P   +   + INGQFPGP+I A   D++++ + N L  E  +I W+G
Sbjct: 4   RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63

Query: 86  VQQRRNSWQDGVYG-TNCPIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIA 144
           + QR   W DG    + C I PG+ F Y   V D  G++FY   L   ++AG YG + + 
Sbjct: 64  ILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVD 122

Query: 145 SRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSGS--DLPFPDGLVINGRG----- 197
                  PF    G+  +L  DW+ ++    +  L S     +  P  +++NGRG     
Sbjct: 123 PPQGKKEPFHYD-GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCS 181

Query: 198 -------------------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEV 238
                                   F V   KTYR RI++     ++NF I  H++L+VE 
Sbjct: 182 IAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEA 241

Query: 239 EGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQG-YYIVISTRFTSQ-VLSATSVLHYSNS 296
           +G +        +DI+ G+SYSVL+  DQ P   Y++ + TR          ++L+Y  +
Sbjct: 242 DGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPN 301

Query: 297 AGSVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTA 356
           + S   P    P T      +++++    +TA+   P P        +     I L NT 
Sbjct: 302 SVS-KLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFLLNTQ 353

Query: 357 PTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPD----------NPTGGGAY 406
             ING  ++A+N VS     TP   A  + +   F     P+           PT     
Sbjct: 354 NVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTR 413

Query: 407 LQTSVMAADFRGFAEVVFENPE------DTLQSWHIDGHNFFAVGMDGGEWTPASRLTYN 460
           +   V         +V+ +N             WH+ GH+F+ +G   G+++     + N
Sbjct: 414 IGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLN 473

Query: 461 LRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDE 520
           L++   R TV ++P  WTA+    DN G+W          ++G                 
Sbjct: 474 LKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAE-----GVEKV 528

Query: 521 YPIPSNALLCGRAVGH 536
             IP+ AL CG     
Sbjct: 529 GRIPTKALACGGTAKS 544
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query538
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 100.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 100.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 100.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 100.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 100.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 100.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 100.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 100.0
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 100.0
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 100.0
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 100.0
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 100.0
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 100.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 100.0
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 100.0
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 100.0
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 100.0
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 100.0
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 100.0
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 100.0
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 100.0
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 100.0
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 100.0
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 100.0
2zoo_A442 Probable nitrite reductase; electron transfer, ele 100.0
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 100.0
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 100.0
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 100.0
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 100.0
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.97
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.96
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.96
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.9
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 99.87
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.87
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.87
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.85
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.84
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 99.8
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.8
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 99.66
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 99.65
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.64
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 99.58
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.58
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 99.58
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 99.48
2cal_A154 Rusticyanin; iron respiratory electron transport c 99.47
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 99.46
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 99.44
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 99.42
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 99.41
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 99.4
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.4
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 99.39
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 99.35
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 99.35
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 99.33
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 99.33
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 99.25
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 99.24
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 99.24
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 99.22
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.19
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 99.14
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 99.12
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.06
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.0
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 99.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 98.94
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.94
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.91
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.87
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.83
3c75_A132 Amicyanin; copper proteins, electron transfer comp 98.81
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.76
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.76
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.74
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.73
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.67
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.67
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.66
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 98.63
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.62
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.61
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.61
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 98.58
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 98.58
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.55
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 98.5
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.44
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.38
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 98.36
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.35
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 98.34
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 98.28
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 98.28
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 98.19
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.17
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 98.13
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 98.08
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 98.0
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 97.98
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 97.98
2cal_A154 Rusticyanin; iron respiratory electron transport c 97.98
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 97.97
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 97.94
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 97.87
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 97.49
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 97.34
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 97.34
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 97.25
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 97.24
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 97.21
3c75_A132 Amicyanin; copper proteins, electron transfer comp 97.08
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 96.96
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 96.8
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 96.66
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 96.55
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 96.45
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 96.33
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 96.07
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 95.82
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 95.41
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 95.4
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 94.96
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 94.67
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 93.68
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 93.07
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 89.82
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
Probab=100.00  E-value=3.3e-101  Score=834.94  Aligned_cols=492  Identities=29%  Similarity=0.543  Sum_probs=393.6

Q ss_pred             CeEEEEEEEEEEEecCCCeeeEEEEEcCcCcCceEEEecCCEEEEEEEeCCC-CCceeeeccccCCCCCCCCCCCC-CCC
Q 009283           25 PYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPSIEAVTNDNLIISVFNALD-EPFLISWNGVQQRRNSWQDGVYG-TNC  102 (538)
Q Consensus        25 ~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~pgP~i~v~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~-tq~  102 (538)
                      .+|+|+|+|++..+.+||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+++ |||
T Consensus         2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~   81 (552)
T 1aoz_A            2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC   81 (552)
T ss_dssp             CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred             eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence            5799999999999999999999999999999999999999999999999998 99999999999999899999999 999


Q ss_pred             CCCCCCeEEEEEEecCCccceeeecCchhhhhcceeeEEEEecCCCCCCCCCCCCCceEEEEeeecccChhhHHHHhccC
Q 009283          103 PIPPGKNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGIKIASRPLIPVPFDPPAGDFTILAGDWYKKNHTDLKAILDSG  182 (538)
Q Consensus       103 ~i~pG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~  182 (538)
                      +|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||++++....++ ..|+|++|+++||+++....+...+...
T Consensus        82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~  159 (552)
T 1aoz_A           82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSK  159 (552)
T ss_dssp             CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred             CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcc
Confidence            99999999999999 699999999999999999999999999986555556 3468999999999998765554333221


Q ss_pred             --CCCCCCCeEEEcCCCCC------------------------CceEEEecCCEEEEEEEecCCCceEEEEEeCCeeEEE
Q 009283          183 --SDLPFPDGLVINGRGSN------------------------ANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLV  236 (538)
Q Consensus       183 --~~~~~~~~~liNG~~~~------------------------~p~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~vi  236 (538)
                        .....++.++|||+...                        .+.++|++|++|||||||+|..+.+.|+|+||+|+||
T Consensus       160 ~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi  239 (552)
T 1aoz_A          160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV  239 (552)
T ss_dssp             SCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred             cccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence              12245789999999842                        0179999999999999999999999999999999999


Q ss_pred             EEcCeecccceecEEEEcCCCeEEEEEEe-CCCCcceEEEEEeecc-CCccceEEEEEecCCCCC--CCCCCCCCCC-cc
Q 009283          237 EVEGTHTLQNTYDSLDIHLGQSYSVLVRA-DQPPQGYYIVISTRFT-SQVLSATSVLHYSNSAGS--VSGPPPGGPT-TQ  311 (538)
Q Consensus       237 a~DG~~~~p~~~~~v~l~pgeR~dv~v~~-~~~~g~y~i~~~~~~~-~~~~~~~ail~y~~~~~~--~~~~~p~~P~-~~  311 (538)
                      ++||.+++|+.++++.|+|||||||+|++ ++++|+|||++....+ .......|+|+|.++...  ...+.|..|. .+
T Consensus       240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~  319 (552)
T 1aoz_A          240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDD  319 (552)
T ss_dssp             EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTC
T ss_pred             EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccc
Confidence            99999999999999999999999999999 4568999999987543 234578899999876531  1111222221 11


Q ss_pred             ccchhhhhhhhcccCCCCCCCCCCCCCCCccccccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCcc
Q 009283          312 IDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVF  391 (538)
Q Consensus       312 ~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~  391 (538)
                      .....  ...+. .+....+.+.+        ...++++.+.......++...|+|||++|..++.|+|.+.+.++.|.|
T Consensus       320 ~~~~~--~~~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~  388 (552)
T 1aoz_A          320 FDRSK--NFTYR-ITAAMGSPKPP--------VKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAF  388 (552)
T ss_dssp             HHHHH--HHHTT-CCBCTTCCCCC--------SSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSS
T ss_pred             ccccc--ccccc-ccccCCCCCCC--------CCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCcccc
Confidence            11000  00111 11110011111        134566666543222345678999999999889999988766666666


Q ss_pred             ccCCCCC---------CC-CCCCcceeeEEEEccCCcEEEEEEEcCCC------CCCCccccCCCceEEeecCCCCCCCC
Q 009283          392 SVGSIPD---------NP-TGGGAYLQTSVMAADFRGFAEVVFENPED------TLQSWHIDGHNFFAVGMDGGEWTPAS  455 (538)
Q Consensus       392 ~~~~~~~---------~p-~~~~~~~~~~~~~~~~g~~v~~~l~N~~~------~~HP~HlHG~~F~Vl~~~~g~~~~~~  455 (538)
                      +.+....         .| .....+.++.++.++.|++|+|+|+|.+.      +.||||||||+||||+++.|.|++..
T Consensus       389 ~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~  468 (552)
T 1aoz_A          389 DQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE  468 (552)
T ss_dssp             CCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGG
T ss_pred             ccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCccc
Confidence            5322111         01 11244667888999999999999999874      45999999999999999988887744


Q ss_pred             CCCcCCCCCCceeeEEeCCCCEEEEEEEccCcceeeeeecchhhhhcceEEEEEEecCCCcCCccCCCCCchhcccccc
Q 009283          456 RLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAV  534 (538)
Q Consensus       456 ~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~~  534 (538)
                      ...+|+.+|.|||||.|+++||++|||+|||||.|+|||||++|++.|||++|.+. +++    ++++|+++++|+.++
T Consensus       469 ~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~-~~~----~~~~P~~~~~C~~~~  542 (552)
T 1aoz_A          469 ESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEG-VEK----VGRIPTKALACGGTA  542 (552)
T ss_dssp             GGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC-GGG----CCCCCHHHHSSHHHH
T ss_pred             ccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeC-chh----hccCCcchhhhhccC
Confidence            56789999999999999999999999999999999999999999999999999874 332    367899999999875
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 538
d1aoza3214 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C 5e-37
d1aoza2209 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C 8e-31
d1v10a2168 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus 2e-30
d2q9oa2181 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce 8e-29
d1gyca1130 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la 3e-28
d1hfua1131 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin 3e-27
d1hfua2172 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr 4e-27
d1gyca2170 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, 5e-26
d1v10a1136 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T 3e-25
d1aoza1129 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc 6e-25
d2q9oa1162 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces 2e-20
d1kv7a2165 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc 1e-14
d1kv7a1140 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch 2e-14
d1oe2a1159 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige 1e-13
d1kbva1151 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser 6e-13
d2bw4a1157 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige 8e-11
d2j5wa1192 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie 2e-10
d1sdda1180 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t 1e-09
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 3e-09
d1gska1181 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci 1e-08
d2q9oa3216 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce 1e-08
d1mzya1153 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba 1e-08
d2j5wa3207 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap 4e-08
d2j5wa4179 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap 1e-07
d2j5wa5149 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa 1e-07
d1sddb2139 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B 1e-06
d2j5wa2145 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap 2e-06
d1gyca3199 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, 3e-06
d1v10a3190 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus 4e-06
d1hfua3200 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr 4e-05
d1kcwa2146 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap 2e-04
d1kv7a3181 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc 3e-04
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

 Score =  134 bits (337), Expect = 5e-37
 Identities = 47/205 (22%), Positives = 74/205 (36%), Gaps = 21/205 (10%)

Query: 345 NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIPD------ 398
                I L NT   ING  ++A+N VS     TP   A  + +   F     P+      
Sbjct: 4   KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDY 63

Query: 399 ----NPTGGGAYLQTSVMAADFRGFAEVVFE------NPEDTLQSWHIDGHNFFAVGMDG 448
                PT     +   V         +V+ +              WH+ GH+F+ +G   
Sbjct: 64  DIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 123

Query: 449 GEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNIRSENWARQYLGQQFYL 508
           G+++     + NL++   R TV ++P  WTA+    DN G+W          ++G     
Sbjct: 124 GKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVF 183

Query: 509 RVYSSANSWRDEYPIPSNALLCGRA 533
                         IP+ AL CG  
Sbjct: 184 AE-----GVEKVGRIPTKALACGGT 203
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query538
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 100.0
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 100.0
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.98
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.98
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.97
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.97
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.97
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.96
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.96
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.96
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.96
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.96
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.96
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.96
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.95
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.95
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.92
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.89
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.89
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.89
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.87
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.86
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 99.86
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.85
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.84
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.84
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.84
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.83
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.7
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.69
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.69
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.69
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.68
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.68
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.67
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 99.61
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.61
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 99.56
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.51
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.39
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.37
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.27
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 99.22
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.22
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.22
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.21
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.2
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.18
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.13
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 99.09
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 99.06
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.05
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.02
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 98.96
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 98.92
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 98.9
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.87
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.85
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 98.76
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 98.67
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.6
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.6
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.58
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 98.55
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 98.53
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 98.47
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 98.44
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.35
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.34
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 98.32
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 98.3
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 98.28
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 98.23
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 98.21
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 98.19
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 98.19
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 98.11
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.09
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 98.09
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 98.09
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 98.0
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 97.97
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 97.96
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 97.92
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 97.91
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 97.88
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 97.87
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 97.85
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 97.85
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.84
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 97.78
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.76
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 97.66
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.51
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 97.35
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 97.3
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 97.29
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 97.27
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 97.24
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.18
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 97.17
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 97.14
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 97.04
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 96.86
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 96.49
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 96.42
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 96.32
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 96.27
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 96.24
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 96.08
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 96.01
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 96.0
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 95.99
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 95.94
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 95.77
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 95.74
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 95.7
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 95.67
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 95.6
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 95.46
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 95.25
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 93.34
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 84.83
d1w8oa1103 Sialidase, "linker" domain {Micromonospora viridif 84.54
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 81.28
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=100.00  E-value=8.8e-41  Score=312.32  Aligned_cols=185  Identities=26%  Similarity=0.455  Sum_probs=154.2

Q ss_pred             ccceEEEEecccCCCCCeEeEEECCeeecCCCCchhhhcccCCCCccccCCCC----------CCCCCCCcceeeEEEEc
Q 009283          345 NTTHTIRLQNTAPTINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSVGSIP----------DNPTGGGAYLQTSVMAA  414 (538)
Q Consensus       345 ~~~~~~~~~~~~~~~~g~~~~~iNg~~f~~p~~P~l~~~~~~~~g~~~~~~~~----------~~p~~~~~~~~~~~~~~  414 (538)
                      ..++++.+..+....+|..+|+|||++|..|++|+|.+.+++..+.++.+...          ..+.+...+.|+.++.+
T Consensus         4 ~~~~ti~l~~~~~~~ng~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v~~~   83 (214)
T d1aoza3           4 KFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQF   83 (214)
T ss_dssp             SCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEE
T ss_pred             CCCeEEEEecCccccCCeEEEEECCEeccCCCcchHHHHhhccccccccCCCcccccccccccCCCCCcccccCceeEEe
Confidence            34677877655445678899999999999999999988776665555433211          11223467889999999


Q ss_pred             cCCcEEEEEEEcCCC------CCCCccccCCCceEEeecCCCCCCCCCCCcCCCCCCceeeEEeCCCCEEEEEEEccCcc
Q 009283          415 DFRGFAEVVFENPED------TLQSWHIDGHNFFAVGMDGGEWTPASRLTYNLRDTISRCTVQVYPKSWTAVYVPLDNVG  488 (538)
Q Consensus       415 ~~g~~v~~~l~N~~~------~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG  488 (538)
                      ++|++|||+|+|.+.      ..||||||||+||||+++.|.++......+++.+|.||||+.|++++|++|||++||||
T Consensus        84 ~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~adnpG  163 (214)
T d1aoza3          84 KIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPG  163 (214)
T ss_dssp             CTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCE
T ss_pred             cCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecCCCe
Confidence            999999999999653      46999999999999999999998777778999999999999999999999999999999


Q ss_pred             eeeeeecchhhhhcceEEEEEEecCCCcCCccCCCCCchhcccccc
Q 009283          489 MWNIRSENWARQYLGQQFYLRVYSSANSWRDEYPIPSNALLCGRAV  534 (538)
Q Consensus       489 ~w~~HCHil~H~d~GMm~~~~V~~p~~~~~~~~~~p~~~~~c~~~~  534 (538)
                      .|+||||+++|++.|||++|.|...     +..++|.++++||.++
T Consensus       164 ~w~~HCH~~~H~~~GM~~~~~v~~~-----~~~~~P~~~~~cg~~~  204 (214)
T d1aoza3         164 VWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALACGGTA  204 (214)
T ss_dssp             EEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSSHHHH
T ss_pred             eEEEEECcHHHHhCcCcEEEEEccc-----cccCCCccccccccch
Confidence            9999999999999999999987532     2468999999998653
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure