Citrus Sinensis ID: 009377

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530------
Protein Sequence
MATEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLSLDSTSAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRWACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRDSELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAATNSKPQNKRGHGASNSRGSGPPAFRPAKAAKFSNSSQSFSRRNPAPKAQHSPAARYSGPYGYPSQSVYEGPSTAHYASTYGVPHTQSLAAIPQQHYSLPADNMGSAGFRASSSYTGQTGSYGAYDYSSAPVSSYQSSSYTH
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccHHHHHHHHcHHHHHHHHHcccccccccccHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHcccHcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MATEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLSLDSTSAQTLDSlshrensipdrHNAAFRLIHDHRDsaladflkppkfadlSDTLKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWeavdpsrlVLDAVEEFLAQKREkvgvtdkrwacGLLVqaifpegsgnngkkaavgpvHARKVVERAAGVVERWkedfrdselgpAEAVMFLQMVFGfglssrfdQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFAsesgltekfppvsllkshlrnskknstsilkngnhsnsateesnnleLNSIKAIIKCVEdhklesafsVDNLRKRATQLEKVKVErkkssaatnskpqnkrghgasnsrgsgppafrpakaakfsnssqsfsrrnpapkaqhspaarysgpygypsqsvyegpstahyastygvphtqslaaipqqhyslpadnmgsagfrasssytgqtgsygaydyssapvssyqsssyth
Flexible Loop (DISEMBL)
matevsiktdrveKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLSLDSTSAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRRMDSSGLLKFiiskrkesvslrTEISraiweavdpsrlVLDAVEEFLAQKrekvgvtdkrwACGLLVQaifpegsgnngkkaavgpvharkVVERAAGVVERWKEDFRDSELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFasesgltekfppvslLKSHLRNSKKNstsilkngnhsnsateesnnlELNSIKAIIKCVEDHKLesafsvdnlrkRATQlekvkverkkssaatnskpqnkrghgasnsrgsgppAFRPAKAAKFsnssqsfsrrnpapkaqHSPAARYSGPYGYPSQSVYEGPSTAHYASTYGVPHTQSLAAIPQQHYSLPADNMGSAGFRASSSYTGQTGSYGaydyssapvssyqsssyth
Low Complexity Region (SEG)
MATEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEdslsqkfksldskflsldsTSAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRWACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRDSELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAATNSKPQNKRGHGASNSRGSGppafrpakaakfsnssqsfsrrnPAPKAQHSPAARYSGPYGYPSQSVYEGPSTAHYASTYGVPHTQSLAAIPQQHYSLPADNMGSAGFRasssytgqtgsygayDyssapvssyqsssyTH
Disordered region (IsUnstruct)
***********VEKFFEDLKAQKTILSSCMQLFKSLTSHFT********************************************AFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRWACGLLVQAIFPEGS*****KAAVGPVHARKVVERAAGVVERWKEDFRDSELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFASES*********************************************NSIKAIIKCVEDHKLESAF****************************************************************************************************YASTYGV***********************************************************
Disordered Region (DISOPRED)
**********RVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDS*********************************************************************SLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFL**********DKRWACGLLVQAIFPEG******************VERAAGVVERWKE*F****LGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLR****************************NSIKAIIKCVEDHK***************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
MATEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLSLDSTSAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRWACGLLVQAIFPEGSG***********HARKVVERAAGVVERWKEDFRDSELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKN************NLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEK****************************************************************ARYSGPYGYPSQSVYEGPSTAHYASTYGVPHTQSLAAIPQQHYSLPADNMGSAGFRASSSYTGQTGSYGAYDYSSA************
Disordered Region (DISPRO)
**TEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLSLDSTSAQTLDSLSHRENS****************************FADLSDTLKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRWACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRDSELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKV***********************************************SRRNPAPKAQHSPAARYSGPYGYPSQSVYEGPSTAHYASTYGVPHTQSLAAIPQQHYSLPADNMGSAGFRASSSYTGQTGSYGAYDYSSAPVSSYQS*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLSLDSTSAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRWACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRDSELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAATNSKPQNKRGHGASNSRGSGPPAFRPAKAAKFSNSSQSFSRRNPAPKAQHSPAARYSGPYGYPSQSVYEGPSTAHYASTYGVPHTQSLAAIPQQHYSLPADNMGSAGFRASSSYTGQTGSYGAYDYSSAPVSSYQSSSYTH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	536	2.2.26 [Sep-21-2011]
P0DH90	609	Protein FRIGIDA OS=Arabid	no	no	0.563	0.495	0.241	2e-10

>sp|P0DH90|FRIGI_ARATH Protein FRIGIDA OS=Arabidopsis thaliana GN=FRI PE=2 SV=1

 Score = 67.8 bits (164), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 135/339 (39%), Gaps = 37/339 (10%)

Query: 117 LCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKR----EK 172
           +C  M S GL K+I +   +   L  EI  A+  A +P++ VLD + +F  Q R    ++
Sbjct: 148 MCELMCSKGLRKYIYANISDQAKLMEEIPSALKLAKEPAKFVLDCIGKFYLQGRRAFTKE 207

Query: 173 VGVTDKRWACGLLVQAIFPEGSGNNGK---------KAAVGPVHARKVVERAAGVVERWK 223
             ++  R    L++++         GK         +A    V  RK +    G+    K
Sbjct: 208 SPMSSARQVSLLILESFLLMPDRGKGKVKIESWIKDEAETAAVAWRKRLMTEGGLAAAEK 267

Query: 224 EDFRDSELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKM 283
            D R            L +V  FG+ S F    L  L+    S      L         +
Sbjct: 268 MDARG----------LLLLVACFGVPSNFRSTDLLDLIRMSGSNEIAGALKRSQFLVPMV 317

Query: 284 EDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSAT 343
             I+   +K G  IEA+      G+ +KF    +L S L+ SK+ S    K    S  A 
Sbjct: 318 SGIVESSIKRGMHIEALEMVYTFGMEDKFSAALVLTSFLKMSKE-SFERAKRKAQSPLAF 376

Query: 344 EESNNLELNSIKAIIKCVEDHKLESA---------FSVDNLRKRATQLEKVKVERKKSSA 394
           +E+   +L  + ++++C+E HKL+ A           + +L K   QL+K   E+ +S +
Sbjct: 377 KEAATKQLAVLSSVMQCMETHKLDPAKELPGWQIKEQIVSLEKDTLQLDKEMEEKARSLS 436

Query: 395 ATNSKPQNKRGHGASNSRGSGPPAFRPAKAAKFSNSSQS 433
                   KR +     R    P   P +    ++SS S
Sbjct: 437 LMEEAALAKRMYNQQIKR----PRLSPMEMPPVTSSSYS 471

Required for the regulation of flowering time in the late-flowering phenotype. Increases RNA levels of 'FLOWERING LOCUS C'. Variants with an early-flowering phenotype (Including cv. Columbia, cv. Landsberg Erecta and cv. Wassilewskija) show loss-of-function mutations of FRI.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	536
255546533	547	conserved hypothetical protein [Ricinus	0.994	0.974	0.647	0.0
359484596	533	PREDICTED: uncharacterized protein LOC10	0.942	0.947	0.651	0.0
224107072	498	predicted protein [Populus trichocarpa]	0.865	0.931	0.664	1e-177
356527791	520	PREDICTED: uncharacterized protein LOC10	0.932	0.961	0.583	1e-149
357518715	539	Protein FRIGIDA [Medicago truncatula] gi	0.951	0.946	0.516	1e-139
388511185	539	unknown [Medicago truncatula]	0.951	0.946	0.514	1e-138
297738842	297	unnamed protein product [Vitis vinifera]	0.511	0.922	0.718	1e-105
224143517	338	predicted protein [Populus trichocarpa]	0.539	0.855	0.615	7e-97
224107076	278	predicted protein [Populus trichocarpa]	0.472	0.910	0.680	7e-92
224143513	287	predicted protein [Populus trichocarpa]	0.472	0.881	0.676	4e-91

>gi|255546533|ref|XP_002514326.1| conserved hypothetical protein [Ricinus communis] gi|223546782|gb|EEF48280.1| conserved hypothetical protein [Ricinus communis]

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/550 (64%), Positives = 420/550 (76%), Gaps = 17/550 (3%)

Query: 1   MATEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLS 60
           MA +++I TDR +KF EDL+AQKTILSSC QLF +LTSHFTSL+ SL+ K +SLDSKF S
Sbjct: 1   MAIDLAINTDRTQKFIEDLEAQKTILSSCTQLFTTLTSHFTSLQQSLTVKSQSLDSKFQS 60

Query: 61  LDSTSAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRR 120
           L S S QTL+SLSHRE SIP+R +AA   I + +  ALA+F K  K+ +LSD LKS+ R+
Sbjct: 61  LQSNSNQTLESLSHRETSIPERESAAAAKIEEQKVKALAEFEKSQKYDNLSDYLKSISRK 120

Query: 121 MDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRW 180
           MD+SGLLKF+ISKRKESVSLR EIS AI EAVDP+ L+LDAV+EF+  K EKVGVTDKRW
Sbjct: 121 MDASGLLKFVISKRKESVSLRAEISPAIMEAVDPAMLILDAVDEFVNSKIEKVGVTDKRW 180

Query: 181 ACGLLVQAIFPE-GSGNNGKKAAVGPVHARKVVERAAGVVERWK-----------EDFRD 228
           ACG+LVQ +FPE  SG  G K   GP  +R  VERA  ++ERWK                
Sbjct: 181 ACGMLVQVLFPEMSSGCFGGKCK-GPKFSRSAVERAGKILERWKGMEEKVNGEEGGGGSS 239

Query: 229 SELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIA 288
             +GPAEAVMFLQMV  FGL +RFD+++LRKLVM+ A+RRDMA+LA  +GFGEKME +I 
Sbjct: 240 GVVGPAEAVMFLQMVVVFGLKARFDEEYLRKLVMENATRRDMAKLAVAVGFGEKMEGMID 299

Query: 289 ELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNN 348
           ELVK+GKE+EAVYFASES LTEKFPPVSLLKS+++NSKK + +ILKNGN S +AT+ESN 
Sbjct: 300 ELVKNGKEVEAVYFASESVLTEKFPPVSLLKSYIKNSKKITATILKNGNFSAAATDESNT 359

Query: 349 LELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVER--KKSSAATNSKPQNKRGH 406
           +EL+SIKA+I CVEDHKLES FS+D+LRKR T+LEK K ER    ++AA  +K QNKRG 
Sbjct: 360 VELSSIKAVINCVEDHKLESEFSLDSLRKRVTRLEKTKAERKKSSAAAAAAAKSQNKRGP 419

Query: 407 GASNSRGSGPPAFRPAKAAKFSNSSQSFSRRNPAPKAQHSPAARYSGPYGYPSQSVYEGP 466
            AS  R    P FRP KAAKFSN+   F RRNPAP  QHSPAARYSGPY YPSQ+VYEG 
Sbjct: 420 SASGGRDPRAPTFRPGKAAKFSNAYSPFGRRNPAPVTQHSPAARYSGPYNYPSQNVYEGH 479

Query: 467 STAHYASTYGVPHTQSLAAIPQQHYSLPADNMGSAGFRASSSYTGQTGSYGAYDYSSAPV 526
           STA YASTYG  H QS AAIPQQHYSLP DN  +AGFRAS SY GQ  +YGAYDY S   
Sbjct: 480 STAPYASTYGASHAQSPAAIPQQHYSLPVDN-AAAGFRASGSYGGQ-ANYGAYDYGSGAP 537

Query: 527 SSYQSSSYTH 536
            ++QSSSYT 
Sbjct: 538 PTFQSSSYTQ 547

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484596|ref|XP_002281155.2| PREDICTED: uncharacterized protein LOC100266187 [Vitis vinifera]

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/519 (65%), Positives = 410/519 (78%), Gaps = 14/519 (2%)

Query: 5   VSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLSLDST 64
           ++I TDRV+K F+ L+AQKTILS+C QL+K+L++HF+SL+ SLSQK  SLDSKF +L+S 
Sbjct: 1   MAIDTDRVQKLFDSLEAQKTILSTCTQLYKTLSNHFSSLQHSLSQKSSSLDSKFQALESD 60

Query: 65  SAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKP-PKFADLSDTLKSLCRRMDS 123
           S +TL+SL  RENSIP+R ++A   I + R++AL++F K  P+ A+LS+ LKS CR+MDS
Sbjct: 61  SKKTLESLDQRENSIPERESSAAARIEEQREAALSEFEKAVPENAELSECLKSYCRKMDS 120

Query: 124 SGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRWACG 183
           SGLL+F++SKRKES+SLR+EI  A+ E+VD +RLVLDAVEEF++QK  KVG+ DKRWACG
Sbjct: 121 SGLLRFMVSKRKESMSLRSEIVSAMEESVDSARLVLDAVEEFVSQKSGKVGIPDKRWACG 180

Query: 184 LLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRD----SELGPAEAVMF 239
           +L+QA+FP  +   G K    P  AR VVERAA V E WK    D    S +GP EA MF
Sbjct: 181 MLMQALFP--AAELGGKTVPKPAFARSVVERAARVAELWKGKMGDGGEGSMIGPTEAAMF 238

Query: 240 LQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEA 299
           +QMV GFGL  +FD++FLRK V+++ASRRDM +LA  LGFGEKM DII ELVKSGKEIEA
Sbjct: 239 MQMVAGFGLKPKFDEEFLRKQVLEFASRRDMPKLAIALGFGEKMGDIIDELVKSGKEIEA 298

Query: 300 VYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAIIK 359
           VYFASESGLTE+F PVSLLKS+L NS+KN+T+ILKNGN+S +ATEES N+ELNSIK IIK
Sbjct: 299 VYFASESGLTERFSPVSLLKSYLHNSRKNATTILKNGNYSTAATEESGNVELNSIKTIIK 358

Query: 360 CVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAATNSKPQNKRGH----GASNSRGSG 415
           CVEDHKLES FS+D+LRKRATQLEK KVERKKSSA   SKP NKR H    G+ + RGSG
Sbjct: 359 CVEDHKLESEFSIDSLRKRATQLEKAKVERKKSSAGA-SKPPNKRAHGGGSGSGSGRGSG 417

Query: 416 PPAFRPAKAAKFSNSS-QSFSRRNPAPKAQHSPAARYSGPYGYPSQSVYEGPSTAHYAST 474
           P AFRPAKA KFSNS+  SF RRNPAP  QHSPA RYSGP+ YP+Q VY+GP+   YAST
Sbjct: 418 PSAFRPAKAPKFSNSTYPSFGRRNPAPPPQHSPAGRYSGPFSYPAQGVYDGPTPPPYAST 477

Query: 475 YGVPHTQSLAAIPQQHYSLPADNMGSAGFRASSSYTGQT 513
           YG PH Q+   IPQQHYSL  D+MG+ G RAS SY GQT
Sbjct: 478 YGGPHPQT-PTIPQQHYSLSVDDMGAGGMRASGSYGGQT 515

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107072|ref|XP_002333571.1| predicted protein [Populus trichocarpa] gi|222837220|gb|EEE75599.1| predicted protein [Populus trichocarpa]

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 321/483 (66%), Positives = 383/483 (79%), Gaps = 19/483 (3%)

Query: 1   MATEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLS 60
           MATE++I+T+R +KFF DL A+KTILSSC QLF +LT+HF SL++SLSQK  SL+SKF S
Sbjct: 1   MATELAIETERTQKFFNDLDARKTILSSCTQLFTTLTTHFKSLQNSLSQKSLSLESKFQS 60

Query: 61  LDSTSAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRR 120
           L+S S  TL+SLS RE SIP+R +AA   + + R++AL++F     F +LSD+LKSLCRR
Sbjct: 61  LESNSQLTLESLSCREKSIPERESAAAAKVEEQRETALSEFRNSHSFDNLSDSLKSLCRR 120

Query: 121 MDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRW 180
           MDSSGLL+F++SKRKESV LR EISRAI EAVDP+RL LDAV+E +  K  KVGVTDKRW
Sbjct: 121 MDSSGLLRFVVSKRKESVFLRAEISRAIMEAVDPARLTLDAVDELVRDKVGKVGVTDKRW 180

Query: 181 ACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRDSELG-------- 232
           ACG+LVQA+FPEG     K    GP  AR VVERAAG++E WKE+    E          
Sbjct: 181 ACGILVQALFPEGCCFGRKDK--GPEFARSVVERAAGILENWKEEDEVEEKADGEGGGGG 238

Query: 233 --------PAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKME 284
                   PAEAVMFLQMV GFGL SRFD++FLRKLV + ASRRDMA+LAA +GFGEKM 
Sbjct: 239 GGGGGVVGPAEAVMFLQMVLGFGLKSRFDEEFLRKLVAENASRRDMAKLAAAIGFGEKMG 298

Query: 285 DIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATE 344
           DII ELVK+GKEIEAVYFASESGLT++F PVSLLKS+L+NSKK +T++LKNGN+S +AT+
Sbjct: 299 DIIDELVKNGKEIEAVYFASESGLTKRFSPVSLLKSYLKNSKKITTTVLKNGNYSAAATD 358

Query: 345 ESNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKK-SSAATNSKPQNK 403
           ES+ LELNSIKAIIKCVEDHKLES FS+D+LRKRA+ LEK K ERK+ +SAAT +K QNK
Sbjct: 359 ESSTLELNSIKAIIKCVEDHKLESEFSLDSLRKRASLLEKTKAERKRGTSAATATKSQNK 418

Query: 404 RGHGASNSRGSGPPAFRPAKAAKFSNSSQSFSRRNPAPKAQHSPAARYSGPYGYPSQSVY 463
           RGHG+S +R SGP  +R AKAAKFSN+  SFSRRN  P AQHSPA RYSGP+ YPSQSVY
Sbjct: 419 RGHGSSGARDSGPTPYRQAKAAKFSNNYSSFSRRNAPPPAQHSPARRYSGPFHYPSQSVY 478

Query: 464 EGP 466
           EGP
Sbjct: 479 EGP 481

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527791|ref|XP_003532490.1| PREDICTED: uncharacterized protein LOC100814061 [Glycine max]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 305/523 (58%), Positives = 391/523 (74%), Gaps = 23/523 (4%)

Query: 11  RVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLSLDSTSAQTLD 70
           RV +FF++L+A+KTIL+ C  LF +L++HF+SL+ S+++K +SLDSK  SLDS S +TL+
Sbjct: 4   RVHQFFDELEAKKTILAKCTDLFTTLSTHFSSLQHSVAEKSQSLDSKLQSLDSLSKETLE 63

Query: 71  SLSHRENSIPDRHNAAFRLIHDHRDSALADFLK--PPKFADLSDTLKSLCRRMDSSGLLK 128
           SL  RE SIP+R ++A   I + R++ALA+ L+  PP   DLS TLKSL R+MD++ LL+
Sbjct: 64  SLHRRETSIPERESSAAARIKEQREAALAELLRATPPPDPDLSATLKSLWRKMDAAALLR 123

Query: 129 FIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRWACGLLVQA 188
           F++SKRKES SLR EI+ A+ EAVDP+RLV++AVEEFL  K  K GVTDKRWACGL++QA
Sbjct: 124 FVVSKRKESASLRAEIAAAMEEAVDPARLVVEAVEEFLKSKVAKSGVTDKRWACGLVIQA 183

Query: 189 IFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFR-DSELGPAEAVMFLQMVFGFG 247
           +                 H+RK+VERA  VVE WKE    +SE G AE VMFLQMV  FG
Sbjct: 184 LMVSSESRE---------HSRKIVERAVAVVETWKEHLDGESESGAAEVVMFLQMVVCFG 234

Query: 248 LSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFASESG 307
           L SRFD D+LR  VM +ASRRDMA+LAA L FG+K+ DII EL+K+GKEIEAVYF+SESG
Sbjct: 235 LRSRFDDDYLRNFVMQFASRRDMAKLAASLQFGDKIIDIIDELIKNGKEIEAVYFSSESG 294

Query: 308 LTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAIIKCVEDHKLE 367
           LTE+FPP+ LLKS+ RN KKN ++I K GN++++  ++S+  ELNSIKAIIKCVEDHKLE
Sbjct: 295 LTERFPPIDLLKSYHRNYKKNVSAIFKKGNNNHATMDDSSTSELNSIKAIIKCVEDHKLE 354

Query: 368 SAFSVDNLRKRATQLEKVKVERKKSSAATNSKPQNKRGHGASNSRGSGPPAFRPAKAAKF 427
           S F++DNLRKRAT LEK K E+KK S  + SKPQNKRG G+S+S        RPAK+AKF
Sbjct: 355 SEFNLDNLRKRATLLEKAKAEKKKGS-TSRSKPQNKRGSGSSSS--------RPAKSAKF 405

Query: 428 SNS-SQSFSRRNPAPKAQHSPAARYSGPYGYPSQSVYEGPSTAHYASTYGVPHTQSLAAI 486
           +++ S SFSRRN AP  Q SP AR+S P+ YPSQ++Y G +   YA+TYG  HTQS A I
Sbjct: 406 NSAHSSSFSRRNLAPSLQPSPGARFSAPFNYPSQTIYNGATANPYAATYGTSHTQSPAGI 465

Query: 487 PQQHYSLPADNMGSAGFRASSSYTGQTGSYGAYDYSSAPVSSY 529
            QQHYS+P DN+G +G+R+S SY+GQT SYG YDY +    +Y
Sbjct: 466 TQQHYSIPVDNLGPSGYRSSGSYSGQT-SYGLYDYRNGAPPTY 507

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357518715|ref|XP_003629646.1| Protein FRIGIDA [Medicago truncatula] gi|357521039|ref|XP_003630808.1| Protein FRIGIDA [Medicago truncatula] gi|355523668|gb|AET04122.1| Protein FRIGIDA [Medicago truncatula] gi|355524830|gb|AET05284.1| Protein FRIGIDA [Medicago truncatula]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 280/542 (51%), Positives = 370/542 (68%), Gaps = 32/542 (5%)

Query: 1   MATEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLS 60
           +AT +S +T++V +FF +L++QK  L  C  LF  L +HF+ L+DS+SQKF++LDS+F S
Sbjct: 6   VATTISSETNKVHQFFNELESQKNTLIKCTDLFTKLNNHFSFLQDSISQKFQTLDSQFQS 65

Query: 61  LDSTSAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRR 120
           L+S   +TL+SL+++ENSIP+R ++A   I + +++ALA    P   ++++  LKSL R+
Sbjct: 66  LESRHKETLESLANQENSIPERESSAAARIDEQKEAALAALRNPNPPSNIAAALKSLSRK 125

Query: 121 MDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKRE-KVGVTDKR 179
           MD+  LL F+ISKRKES+ LR EI+ A+ EAVD  RLVLDAVEE+L  K E K GVTDKR
Sbjct: 126 MDAESLLMFVISKRKESIMLRPEIAAALKEAVDAPRLVLDAVEEYLTCKTEGKSGVTDKR 185

Query: 180 WACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFR-DSELGPAEAVM 238
           WACGLL+Q +  E S           V++R +VERA  +++ WKE    + E G AE VM
Sbjct: 186 WACGLLIQGLISESS-----------VYSRTIVERAGSLLDLWKEQLDGEPEKGAAEMVM 234

Query: 239 FLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIE 298
           FLQMV  FGL S+ D ++LRK VM +ASRRDMA++AA L FG+KM DII ELVK+GKE+E
Sbjct: 235 FLQMVVCFGLRSKVDDEYLRKSVMKFASRRDMAKVAASLEFGDKMIDIIDELVKNGKEME 294

Query: 299 AVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAII 358
           AVYFASESGLTE+F P+ LL S++RN + N  +ILK+GN+S  AT+E+N LEL SIK +I
Sbjct: 295 AVYFASESGLTERFKPIELLNSYVRNYENNVATILKSGNNSQVATDEANTLELTSIKDVI 354

Query: 359 KCVEDHKLESAFSVDNLRKRATQLEKVKVERKKS-----SAATNSKPQNKRGHGASNSRG 413
           KCVEDHKLES F +D L++R +QL+K K ERK +      + + S+P  KRG       G
Sbjct: 355 KCVEDHKLESKFRLDKLKRRVSQLDKNKFERKNTSSFGSGSGSGSRPPRKRG-------G 407

Query: 414 SGPPAFRPAKAAKFSNSSQSF---SRRNPAPKAQHSPAARYSGPYGYPSQSVYEGPSTAH 470
            G  + RPAK+AK S    SF   SRRN       SP ARYS P  Y SQ++ E  + A+
Sbjct: 408 RGTSSSRPAKSAKTSVYPSSFSRLSRRNNLAPVHPSPIARYSAPLHYQSQNMLENSTAAN 467

Query: 471 -YASTYGVPHTQSLAAI--PQQHYSLPADNMGSAGFRASSSYTGQTGSYGAYDYSSAPVS 527
            YA TYG   TQS A I   QQHYS P DN+G + + +SSSY GQT +YG YDY SA   
Sbjct: 468 PYAGTYGTSITQSPAGIGMAQQHYSYPVDNLGPSSYLSSSSYAGQT-NYGQYDYGSAAPP 526

Query: 528 SY 529
           +Y
Sbjct: 527 TY 528

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511185|gb|AFK43654.1| unknown [Medicago truncatula]

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 279/542 (51%), Positives = 370/542 (68%), Gaps = 32/542 (5%)

Query: 1   MATEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLS 60
           +AT +S +T++V +FF +L++QK  L  C  LF  L +HF+ L+DS+SQKF++LDS+F S
Sbjct: 6   VATTISSETNKVHQFFNELESQKNTLIKCTDLFTKLNNHFSFLQDSISQKFQTLDSQFQS 65

Query: 61  LDSTSAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRR 120
           L+S   +TL+SL+++ENSIP+R ++A   I + +++ALA    P   ++++  LKSL R+
Sbjct: 66  LESRHKETLESLANQENSIPERESSAAARIDEQKEAALAALRNPNPPSNIAAALKSLSRK 125

Query: 121 MDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKRE-KVGVTDKR 179
           MD+  LL F+IS+RKES+ LR EI+ A+ EAVD  RLVLDAVEE+L  K E K GVTDKR
Sbjct: 126 MDAESLLMFVISRRKESIMLRPEIAAALKEAVDAPRLVLDAVEEYLTCKTEGKSGVTDKR 185

Query: 180 WACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFR-DSELGPAEAVM 238
           WACGLL+Q +  E S           V++R +VERA  +++ WKE    + E G AE VM
Sbjct: 186 WACGLLIQGLISESS-----------VYSRTIVERAGSLLDLWKEQLDGEPEKGAAEMVM 234

Query: 239 FLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIE 298
           FLQMV  FGL S+ D ++LRK VM +ASRRDMA++AA L FG+KM DII ELVK+GKE+E
Sbjct: 235 FLQMVVCFGLRSKVDDEYLRKSVMKFASRRDMAKVAASLEFGDKMIDIIDELVKNGKEME 294

Query: 299 AVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAII 358
           AVYFASESGLTE+F P+ LL S++RN + N  +ILK+GN+S  AT+E+N LEL SIK +I
Sbjct: 295 AVYFASESGLTERFKPIELLNSYVRNYENNVATILKSGNNSQVATDEANTLELTSIKDVI 354

Query: 359 KCVEDHKLESAFSVDNLRKRATQLEKVKVERKKS-----SAATNSKPQNKRGHGASNSRG 413
           KCVEDHKLES F +D L++R +QL+K K ERK +      + + S+P  KRG       G
Sbjct: 355 KCVEDHKLESKFRLDKLKRRVSQLDKNKFERKNTSSFGSGSGSGSRPPRKRG-------G 407

Query: 414 SGPPAFRPAKAAKFSNSSQSF---SRRNPAPKAQHSPAARYSGPYGYPSQSVYEGPSTAH 470
            G  + RPAK+AK S    SF   SRRN       SP ARYS P  Y SQ++ E  + A+
Sbjct: 408 RGTSSSRPAKSAKTSVYPSSFSRLSRRNNLAPVHPSPIARYSAPLHYQSQNMLENSTAAN 467

Query: 471 -YASTYGVPHTQSLAAI--PQQHYSLPADNMGSAGFRASSSYTGQTGSYGAYDYSSAPVS 527
            YA TYG   TQS A I   QQHYS P DN+G + + +SSSY GQT +YG YDY SA   
Sbjct: 468 PYAGTYGTSITQSPAGIGMAQQHYSYPVDNLGPSSYLSSSSYAGQT-NYGQYDYGSAAPP 526

Query: 528 SY 529
           +Y
Sbjct: 527 TY 528

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738842|emb|CBI28087.3| unnamed protein product [Vitis vinifera]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/281 (71%), Positives = 230/281 (81%), Gaps = 7/281 (2%)

Query: 238 MFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEI 297
           MF+QMV GFGL  +FD++FLRK V+++ASRRDM +LA  LGFGEKM DII ELVKSGKEI
Sbjct: 1   MFMQMVAGFGLKPKFDEEFLRKQVLEFASRRDMPKLAIALGFGEKMGDIIDELVKSGKEI 60

Query: 298 EAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAI 357
           EAVYFASESGLTE+F PVSLLKS+L NS+KN+T+ILKNGN+S +ATEES N+ELNSIK I
Sbjct: 61  EAVYFASESGLTERFSPVSLLKSYLHNSRKNATTILKNGNYSTAATEESGNVELNSIKTI 120

Query: 358 IKCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAATNSKPQNKRGH----GASNSRG 413
           IKCVEDHKLES FS+D+LRKRATQLEK KVERKKSSA   SKP NKR H    G+ + RG
Sbjct: 121 IKCVEDHKLESEFSIDSLRKRATQLEKAKVERKKSSAGA-SKPPNKRAHGGGSGSGSGRG 179

Query: 414 SGPPAFRPAKAAKFSNSS-QSFSRRNPAPKAQHSPAARYSGPYGYPSQSVYEGPSTAHYA 472
           SGP AFRPAKA KFSNS+  SF RRNPAP  QHSPA RYSGP+ YP+Q VY+GP+   YA
Sbjct: 180 SGPSAFRPAKAPKFSNSTYPSFGRRNPAPPPQHSPAGRYSGPFSYPAQGVYDGPTPPPYA 239

Query: 473 STYGVPHTQSLAAIPQQHYSLPADNMGSAGFRASSSYTGQT 513
           STYG PH Q+   IPQQHYSL  D+MG+ G RAS SY GQT
Sbjct: 240 STYGGPHPQT-PTIPQQHYSLSVDDMGAGGMRASGSYGGQT 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143517|ref|XP_002324982.1| predicted protein [Populus trichocarpa] gi|222866416|gb|EEF03547.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (925), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 189/307 (61%), Positives = 230/307 (74%), Gaps = 18/307 (5%)

Query: 1   MATEVSIKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEDSLSQKFKSLDSKFLS 60
           MATE++I+T+R +KFF DL A+KTILSSC QLF +LT+HF SL++SLSQK  SL+SKF S
Sbjct: 1   MATELAIETERTQKFFNDLDARKTILSSCTQLFTTLTTHFKSLQNSLSQKSLSLESKFQS 60

Query: 61  LDSTSAQTLDSLSHRENSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLKSLCRR 120
           L+S S  TL+SLS RE SIP+R +AA   + + R++AL++F     F +LSD+LKSLCRR
Sbjct: 61  LESNSQLTLESLSCREKSIPERESAAAAKVEEQRETALSEFRNSHSFDNLSDSLKSLCRR 120

Query: 121 MDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKVGVTDKRW 180
           MDSSGLL+F++SKRKESV LR EISRAI EAVDP+RL LDAV+E +  K  KVGVTDKRW
Sbjct: 121 MDSSGLLRFVVSKRKESVFLRAEISRAIMEAVDPARLTLDAVDELVRDKVGKVGVTDKRW 180

Query: 181 ACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRDSE---------- 230
           ACG+LVQA+FPEG     K    GP  AR VVERAAG++E WKE+    E          
Sbjct: 181 ACGILVQALFPEGCCFGRKDK--GPEFARSVVERAAGILENWKEEDEVEEKADGEGGGGG 238

Query: 231 ------LGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKME 284
                 +GPAEAVMFLQMV GFGL SRFD++FLRKLV + ASRRDMA+LAA +GFGEKM 
Sbjct: 239 GGGGGVVGPAEAVMFLQMVLGFGLKSRFDEEFLRKLVAENASRRDMAKLAAAIGFGEKMG 298

Query: 285 DIIAELV 291
            +IA L 
Sbjct: 299 VVIAVLC 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107076|ref|XP_002333572.1| predicted protein [Populus trichocarpa] gi|222837221|gb|EEE75600.1| predicted protein [Populus trichocarpa]

 Score =  344 bits (882), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 183/269 (68%), Positives = 212/269 (78%), Gaps = 16/269 (5%)

Query: 283 MEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSA 342
           M DII ELVK+GKEIEAVYFASESGLT+ F PVSLLKS+L+NSKK +T++LKNGN+S +A
Sbjct: 11  MRDIIDELVKNGKEIEAVYFASESGLTKIFSPVSLLKSYLKNSKKITTTVLKNGNYSAAA 70

Query: 343 TEESNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKK-SSAATNSKPQ 401
           T+ES+ LELNSIKAIIKCVEDHKLES FS+D+LRKRA+ LEK K ERK+ +SAAT +K Q
Sbjct: 71  TDESSTLELNSIKAIIKCVEDHKLESEFSLDSLRKRASLLEKTKAERKRGTSAATATKSQ 130

Query: 402 NKRGHGASNSRGSGPPAFRPAKAAKFSNSSQSFSRRNPAPKAQHSPAARYSGPYGYPSQS 461
           NKRGHG+S +R SGPP +R AKAAKFSN+  SFSRRN  P AQHSPA RYSGP+ YPSQS
Sbjct: 131 NKRGHGSSGARDSGPPPYRQAKAAKFSNNYSSFSRRNAPPPAQHSPARRYSGPFHYPSQS 190

Query: 462 VYEGPSTAHYASTYGVP--------------HTQSLAAIPQQHYSLPADNMGSAGFRASS 507
           VYEGP+ A YASTYG+               H+QS +AIPQQ YS PA+NM +A FRAS 
Sbjct: 191 VYEGPAAAPYASTYGISHAQSPSAISQQPYHHSQSSSAIPQQLYSQPAENMSAASFRASG 250

Query: 508 SYTGQTGSYGAYDYSSAPVSSYQSSSYTH 536
           SY  QT SYGAYDY SA   +YQ SSYT 
Sbjct: 251 SYGSQT-SYGAYDYGSAAPVTYQPSSYTQ 278

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143513|ref|XP_002324981.1| predicted protein [Populus trichocarpa] gi|222866415|gb|EEF03546.1| predicted protein [Populus trichocarpa]

 Score =  341 bits (875), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 182/269 (67%), Positives = 212/269 (78%), Gaps = 16/269 (5%)

Query: 283 MEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSA 342
           + DII ELVK+GKEIEAVYFASESGLT+ F PVSLLKS+L+NSKK +T++LKNGN+S +A
Sbjct: 20  LWDIIDELVKNGKEIEAVYFASESGLTKIFSPVSLLKSYLKNSKKITTTVLKNGNYSAAA 79

Query: 343 TEESNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKK-SSAATNSKPQ 401
           T+ES+ LELNSIKAIIKCVEDHKLES FS+D+LRKRA+ LEK K ERK+ +SAAT +K Q
Sbjct: 80  TDESSTLELNSIKAIIKCVEDHKLESEFSLDSLRKRASLLEKTKAERKRGTSAATATKSQ 139

Query: 402 NKRGHGASNSRGSGPPAFRPAKAAKFSNSSQSFSRRNPAPKAQHSPAARYSGPYGYPSQS 461
           NKRGHG+S +R SGP  +R AKAAKFSN+  SFSRRN  P AQHSPA RYSGP+ YPSQS
Sbjct: 140 NKRGHGSSGARDSGPTPYRQAKAAKFSNNYSSFSRRNAPPPAQHSPARRYSGPFHYPSQS 199

Query: 462 VYEGPSTAHYASTYGVP--------------HTQSLAAIPQQHYSLPADNMGSAGFRASS 507
           VYEGP+ A YASTYG+               H+QS +AIPQQ YS PA+NM +AGFRAS 
Sbjct: 200 VYEGPAAAPYASTYGISHAQSPSAISQQPYHHSQSPSAIPQQLYSQPAENMSAAGFRASG 259

Query: 508 SYTGQTGSYGAYDYSSAPVSSYQSSSYTH 536
           SY  QT SYGAYDY SA   +YQ SSYT 
Sbjct: 260 SYGSQT-SYGAYDYGSAAPVTYQPSSYTQ 287

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	536
TAIR|locus:2087872	532	AT3G22440 "AT3G22440" [Arabido	0.652	0.657	0.343	2e-53
TAIR|locus:2130429	532	AT4G14900 [Arabidopsis thalian	0.889	0.896	0.306	9.2e-52
TAIR|locus:1005716104	558	AT5G48385 "AT5G48385" [Arabido	0.611	0.587	0.354	2.3e-46
TAIR|locus:2171327	470	FRL1 "FRIGIDA like 1" [Arabido	0.524	0.597	0.298	2.1e-30
TAIR|locus:2826175	473	FRL2 "AT1G31814" [Arabidopsis	0.531	0.602	0.245	6.9e-24
TAIR|locus:2181251	948	AT5G27230 [Arabidopsis thalian	0.485	0.274	0.250	1e-11

TAIR|locus:2087872 AT3G22440 "AT3G22440" [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
 Identities = 130/379 (34%), Positives = 206/379 (54%)

Query:   110 LSDTLKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEE-FLAQ 168
             L   LKSLC +MD+ G   F+ +++KE  +LR++I  A+ + VDP+ LVL+A+ E F   
Sbjct:   127 LLSALKSLCLKMDARGFWNFVTARKKELENLRSKIPAALVDCVDPAMLVLEAISEVFPVD 186

Query:   169 KR-EKVGVTDKRWACGLLVQAIFPE-GSGNNGK-KAAVGPVHARKVVERAAGVVERWKED 225
              R +KV   D  WAC ++++++ P       GK +  V P     V E+A  + E WK+ 
Sbjct:   187 TRGDKVS-NDYGWACVVILESLTPVIVDPVIGKSRLLVTP----SVKEKAKEIAETWKKS 241

Query:   226 FRD----SELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGE 281
               +      +   +   FLQ +  FG+    D    RKLV+  A R+ M +LA  +G G+
Sbjct:   242 LEERGRIENVKTPDVHTFLQHLVTFGIVKSEDLALYRKLVVGSAWRKQMPKLAVSVGLGD 301

Query:   282 KMEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNS 341
             +M D+I EL+  G++++AV+F  E GL +KFPPV LLK++LR++KK++ SI+++ +++  
Sbjct:   302 QMPDMIEELISRGQQLDAVHFTYEVGLVDKFPPVPLLKAYLRDAKKSAASIMEDSSNTGR 361

Query:   342 ATEESNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAATNSKPQ 401
             AT      E +++KA++KC+E++KLE  F  +NL+KR  QLEK K E++K +A     P 
Sbjct:   362 ATHLVARKEQSALKAVLKCIEEYKLEEEFPPENLKKRLDQLEKTKTEKRKPAAV----PA 417

Query:   402 NKRGHGASNSRGSGXXXXXXXXXXXXXXXXXXXXXXXPAPKAQHSPAARYSGPYGYPSQ- 460
             NKR   + N    G                       P+    HSP  +Y+ P  YPS  
Sbjct:   418 NKRTRASYN----GPMPPAKAGRITNAYVSSFPFIRSPS----HSP--QYASPAAYPSPP 467

Query:   461 -SVYEGPSTAHYASTYGVP 478
              +VY   S  +  S   +P
Sbjct:   468 TTVYSNRSPPYPYSPEIIP 486

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

TAIR|locus:2130429 AT4G14900 [Arabidopsis thaliana (taxid:3702)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 158/515 (30%), Positives = 247/515 (47%)

Query:     7 IKTDRVEKFFEDLKAQKTILSSCMQLFKSLTSHFTSLEXXXXXXXXXXXXXXXXXXXTSA 66
             IK+ +   FFE  K Q ++++SC  L+K L+ HFTS+E                    + 
Sbjct:    11 IKSSQ-PSFFEFQK-QASLMTSCNLLWKELSEHFTSMEQNLMKKSEALRQMIETLDNQTQ 68

Query:    67 QTLDSLSHRE-----------NSIPDRHNAAFRLIHDHRDSALADFLKPPKFADLSDTLK 115
              +++ L HRE             + +R  AA   +   RD    D  +      L   LK
Sbjct:    69 SSIELLKHREVTIDHSVEIAEGKVEERVRAALDSLEKARDCGDEDTGEVDDGDGLLSALK 128

Query:   116 SLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEE-FLAQKR---E 171
             SLC +MD+ G   F+I+++KE  +LR++I  A+ + VDP +LVL+AV E F   KR   E
Sbjct:   129 SLCLKMDARGFWGFVIARKKELENLRSQIPVALVDCVDPPKLVLEAVSEVFPVDKRGGGE 188

Query:   172 KVGVTDKRWACGLLVQAIFPEGSGN-NGK-KAAVGPVHARKVVERAAGVVERWKEDFRD- 228
             KV   D  WAC ++++++ P       GK +  V P     V E+A  + E WK    + 
Sbjct:   189 KVS-NDFGWACVVILESLIPVMVDPVMGKSRLLVTP----SVKEKAKEIAETWKASLEER 243

Query:   229 ---SELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMED 285
                  +   +   FLQ +  FG+  + D    RKLV+  A R+ M +LA  +G G++M D
Sbjct:   244 GGIENVKTPDVHTFLQHLVTFGIVKKDDLALYRKLVVGSAWRKQMPKLAVSVGLGDQMPD 303

Query:   286 IIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEE 345
             +I EL+  G++++AV+F  E GL   FPPV LLK++LR++KK +  I  + N+S  +   
Sbjct:   304 MIEELIIRGQQLDAVHFTFEVGLVHLFPPVPLLKAYLRDAKKATALITDDSNNSGRSAHL 363

Query:   346 SNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAATNSKPQNKRG 405
                 E ++++A++KC+E++KLE  F  +NL+KR  QLEK K E++K +    +K      
Sbjct:   364 VARKEQSALRAVLKCIEEYKLEEEFPPENLKKRLDQLEKTKTEKRKPAVIPANKRTRASY 423

Query:   406 HGASNSRGSGXXXXXXXXXXXXXX-XXXXXXXXXP---APKAQHSPAARYSG---PYGYP 458
              G      +G                        P    P    SP   YS    PY Y 
Sbjct:   424 SGPMPPAKAGRITNAYVSSFPPPPPTFIRSQSHSPQYGVPAYTTSPPTIYSNRSPPYQYS 483

Query:   459 SQSVYEGPSTA--HYASTYGVPHTQSLAAIPQQHY 491
              ++V+    T+   Y + YG  +   +AA P   Y
Sbjct:   484 PEAVHGSYQTSPVSYPTAYGT-YCSPVAAPPPPVY 517

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:1005716104 AT5G48385 "AT5G48385" [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
 Identities = 124/350 (35%), Positives = 179/350 (51%)

Query:    76 ENSIPDRHN--AAFRLIHDHRDSALADFLKPPKFADLS----DTLKSLCRRMDSSGLLKF 129
             +N++ D  N  AA  +  D+ D  + D    P   +        L  LC  MDS+GL KF
Sbjct:   131 QNAVEDSSNVFAADSITDDNPDGIVQDVQISPVMGNYEVKAYPQLLKLCGDMDSTGLHKF 190

Query:   130 IISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFL------AQKREKVGVTDKRWACG 183
             +   RK   SL+ EI  A   A +P+ LVLD++E F       A  ++   +   R  C 
Sbjct:   191 VSDNRKNLASLKEEIPMAFRAAANPASLVLDSLEGFYPMEAPTADGKKDANLLGMRRTCI 250

Query:   184 LLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRDSELGPA-----EAVM 238
             +L++ +    SG +    AV  V ++ V  RA  + E W       ++        EA  
Sbjct:   251 MLMECLSILLSGLDRNCLAV--VLSQNVKHRAKTIAEGWNPLLESLDMDACNGNSLEAHA 308

Query:   239 FLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIE 298
             FLQ++  F + + F +D L KL+   + RR  A L   LG  EKM  +I  LV SGK+I+
Sbjct:   309 FLQLLATFAIVADFKEDELLKLIPMVSRRRQAAELCRSLGLAEKMPGVIEVLVNSGKQID 368

Query:   299 AVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAII 358
             AV  A    LTE+F PVSLLKS+L  ++++S    + GN S +  +E N  EL  +K +I
Sbjct:   369 AVNLAFAFELTEQFSPVSLLKSYLIEARRSSPQG-RPGNASPAVQDEFNERELIGLKTVI 427

Query:   359 KCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAATNSKPQNKRGHGA 408
             KC+E+H LE  + V+ L KR  QLEK K ++K+  A    KPQ KR  GA
Sbjct:   428 KCIEEHSLEEQYPVEPLHKRILQLEKAKADKKR--ATEPMKPQPKRPRGA 475

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2171327 FRL1 "FRIGIDA like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
 Identities = 90/302 (29%), Positives = 155/302 (51%)

Query:   114 LKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKREKV 173
             L++LC ++D  GL+K++I    +   L  E+S AI  + D + +VLDA+E          
Sbjct:   101 LRALCEKIDGIGLIKYLIRIWDDETPLNQEVSAAIRYSPDTASMVLDAIEGSNYTPSSSG 160

Query:   174 GVTDKRWACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRDSELG- 232
                D R    LL++ +  E + N         V  R    RA  +   WK     S++G 
Sbjct:   161 RSFDVRRVFVLLMEVLI-EINANI-------TVDTRN---RAKKLAYHWK-----SKVGV 204

Query:   233 -PAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEK-MEDIIAEL 290
              P EA++FL +V  F L S FD + L   V   A  +    +   +G   K +  +I  L
Sbjct:   205 KPFEALVFLHLVAAFELGSEFDTEELSDYVFMIAKYKQATLVCNKIGVDRKRVGKLIKTL 264

Query:   291 VKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLE 350
             + SGK I AV F  E G+T++F P+ +LKS++++ ++ +  +    N+S  +  E+++ E
Sbjct:   265 LDSGKPILAVKFMYECGMTDEFEPIPVLKSYIKDCREAALRVCVEDNYSLKSQNEASDKE 324

Query:   351 LNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAATNSKPQNKRGHGASN 410
             ++++K +IK ++D  LES F+ + + +R  +LEK K  RK+++  TN   Q  +  G   
Sbjct:   325 VSALKPLIKIIKDQNLESEFTQEKVEERVEELEKNKALRKRNT--TNPPKQEPQQKGKKR 382

Query:   411 SR 412
             +R
Sbjct:   383 TR 384

GO:0005634 "nucleus" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2826175 FRL2 "AT1G31814" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 6.9e-24, Sum P(2) = 6.9e-24
 Identities = 75/305 (24%), Positives = 148/305 (48%)

Query:   114 LKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFL----AQK 169
             L+  C + D  GL  ++I   ++ +S+  E+  AI  + +P+ LVLDA+E          
Sbjct:    90 LRKFCEKNDGKGLGNYMIENSRKRLSINEELPNAIRCSENPAPLVLDAIEGSYHCSSPSS 149

Query:   170 REKVGVTDKRWACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRDS 229
                    D +    LL++A+  E + N              + ERA  +   WK +  + 
Sbjct:   150 SSSARAIDVKRIFVLLLEALI-EINANL----------TNDLRERARTIAYDWKPNIGNK 198

Query:   230 ELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGE-KMEDIIA 288
                P+EA+ FL +V  F L S F  + +   +   +  +    +   +G    ++  ++ 
Sbjct:   199 ---PSEALGFLHLVAAFELGSLFSTEEICDYIFLISKYKQATTICKKIGLDRNRIGVLVQ 255

Query:   289 ELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNN 348
             + + +G+ + A+ F  E+ +  +F PVS+LK+ L+NS++ +  +   GN+S     E+ +
Sbjct:   256 KFLDTGRLLVAIRFIYENEMVGEFEPVSILKTSLKNSREAAKRVCAEGNYSLKVQNEATD 315

Query:   349 LELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAATN-SKPQNKRGHG 407
              EL++++A+IK V++  +ES F  + L +   +LE  K +RK+++   + + PQ  +   
Sbjct:   316 KELSALRAVIKVVKEKNIESEFMEEKLEECVKELEDQKAQRKRATKFNSPANPQQPQEQK 375

Query:   408 ASNSR 412
               N R
Sbjct:   376 VDNKR 380

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

TAIR|locus:2181251 AT5G27230 [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
 Identities = 72/287 (25%), Positives = 131/287 (45%)

Query:   126 LLKFIISKR--KESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKRE-----KVGVTDK 178
             +L+ ++ K+  KES     ++S A+    DP++L LD          E     K+ +T  
Sbjct:   552 MLRELVEKQPLKES----EDLSNALKCTPDPAKLFLDTSMALCPTNTEGGYEFKMLITSA 607

Query:   179 RWACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDFRDSELGPAEAVM 238
               +C LL+         N  KK    P     V   A  +   WK+    S+    E + 
Sbjct:   608 --SCSLLL---------NQLKKLL--PKIGHPVKGDAKKLAVYWKDKIAKSKRDQLEVIC 654

Query:   239 FLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIE 298
             FLQ +  FG+ S F  D L  L+ +   +     L   LG  + +   I  L+K+G  I+
Sbjct:   655 FLQFLGIFGIVSEFKADDLLGLLDNSYWQTVSPDLCQFLGLDDAIPGFIQNLIKTGHRIK 714

Query:   299 AVYFASESGLTEKFPPVS-LLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAI 357
             A+ +    G+  +F PVS ++   LR +K+++    +   + ++    + + ++ +++A 
Sbjct:   715 AIDYIYSFGMVHRFQPVSAIINDSLRITKESAEKSYREAKNESTTQVAAIDRQVRALRAA 774

Query:   358 IKCVEDHKLESAFSVDNLRKRATQLEKVK--VERKKSSAATNSKPQN 402
             IKC+  HKLES F + +L ++   L K++        S + +SKP +
Sbjct:   775 IKCISCHKLESEFQLGDLEEQIKSLLKLRRNTSNGSGSGSASSKPDS 821

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_6460001 hypothetical protein (498 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	536
pfam07899	293	pfam07899, Frigida, Frigida-like protein	8e-75

>gnl|CDD|219629 pfam07899, Frigida, Frigida-like protein

 Score =  238 bits (609), Expect = 8e-75
 Identities = 116/295 (39%), Positives = 172/295 (58%), Gaps = 21/295 (7%)

Query: 110 LSDTLKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQK 169
           L+  L+ LC +MDS GLLKF+I  RKE  SLR E+  A+  A DP++LVLDA+E F    
Sbjct: 11  LNPELRRLCEKMDSRGLLKFVIENRKELASLREEVPAALRCAPDPAKLVLDAIEGFYPPD 70

Query: 170 RE---KVGVTDKRWACGLLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDF 226
            +   +  + D R +C LL++ +             V P  +  V E A  +   WK   
Sbjct: 71  SKGGKEDKMVDVRRSCVLLLEQLVR-----------VNPPISPDVKEEAKKLAVEWKAKL 119

Query: 227 RDSELG-----PAEAVMFLQMVFGFGLSSRFDQDFLRKLVMDYASRRDMARLAACLGFGE 281
            + + G       EA+ FLQ++  FGL S FDQD L KL +  + R+    L   LG  +
Sbjct: 120 -EEDGGVENGKSLEALGFLQLLAAFGLVSEFDQDELLKLFVMVSRRKQAPELCRSLGLAD 178

Query: 282 KMEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNS 341
           KM D+I EL+K G++I+AV F  E GL +KFPPVSLLK++L ++KK++  +    N S  
Sbjct: 179 KMPDLIEELIKRGRQIDAVRFIYEFGLVDKFPPVSLLKAYLEDAKKSAKKV-CRENSSLR 237

Query: 342 ATEESNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAAT 396
           A  E+ + EL +++A+IKC+EDHKLES + ++ L +R  +LEK K ++KK++   
Sbjct: 238 AQSEAIDKELAALRAVIKCIEDHKLESEYPLEPLEERIEELEKAKADKKKATEVA 292

This family is composed of plant proteins that are similar to FRIGIDA protein expressed by Arabidopsis thaliana. This protein is probably nuclear and is required for the regulation of flowering time in the late-flowering phenotype. It is known to increase RNA levels of flowering locus C. Allelic variation at the FRIGIDA locus is a major determinant of natural variation in flowering time. Length = 293

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	536
PF07899	290	Frigida: Frigida-like protein; InterPro: IPR012474	100.0
PF07035	167	Mic1: Colon cancer-associated protein Mic1-like; I	94.84
KOG1923	830	consensus Rac1 GTPase effector FRL [Signal transdu	82.49
KOG0921	1282	consensus Dosage compensation complex, subunit MLE	80.6

>PF07899 Frigida: Frigida-like protein; InterPro: IPR012474 This family is composed of plant proteins that are similar to FRIGIDA protein expressed by Arabidopsis thaliana (Mouse-ear cress) (Q9FDW0 from SWISSPROT)

Probab=100.00  E-value=3.2e-90  Score=702.22  Aligned_cols=277  Identities=44%  Similarity=0.681  Sum_probs=265.5

Q ss_pred             ccCchHHHHHHhhcCChHHHHHHHHhhccchhhHHHHHHHHHHhCCCchHHHHHHHhhhhhhccc---cccccchhhHhH
Q 009377          107 FADLSDTLKSLCRRMDSSGLLKFIISKRKESVSLRTEISRAIWEAVDPSRLVLDAVEEFLAQKRE---KVGVTDKRWACG  183 (536)
Q Consensus       107 ~~~~~~~L~~LCe~MDs~GL~kfv~~~~ke~~~lr~Evp~ALr~ApDPAkLVLdai~~F~~~~~~---k~~l~d~r~aCv  183 (536)
                      ...++++|+.||++||++||++||++|+||+.+||+|||+||++|||||+||||||++||+++.+   +.++.+.||+||
T Consensus         8 ~~~~~~~L~~lC~~MD~~gL~~fv~~~~k~~~~lr~Ev~~AL~~A~DPAkLVLdai~~f~~~~~~~~~~~~~~~~r~~ci   87 (290)
T PF07899_consen    8 EVKPRPELKSLCEKMDGKGLRKFVSENRKELASLREEVPAALRCAPDPAKLVLDAIEGFYPPGSKNKKDSKLVDVRRACI   87 (290)
T ss_pred             CcchHHHHHHHHHHCCHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCChHHHHHHHHHcccCCccccccCcchhhHHHHHH
Confidence            33578999999999999999999999999999999999999999999999999999999998753   346788999999


Q ss_pred             HHHHHhcccCCCCCCCcccCCCCCCHhHHHHHHHHHHHHHHhc-cCCCCCcHHHHHHHHHHHHhCCCCCCChHHHHHHHH
Q 009377          184 LLVQAIFPEGSGNNGKKAAVGPVHARKVVERAAGVVERWKEDF-RDSELGPAEAVMFLQMVFGFGLSSRFDQDFLRKLVM  262 (536)
Q Consensus       184 lLLE~L~~~~~~~~~~~~~~~P~is~~vkeeAk~lA~~WK~ki-~~~~~~~leA~gFLqlLa~FGI~seFd~dEL~~Lv~  262 (536)
                      +|||+|++           .+|.++++||++|++||.+||++| +.++.+++|||||||||++|||+++||.|||++||.
T Consensus        88 lLLE~L~~-----------~~~~is~~vke~A~~lA~~WK~~l~~~~~~~~lea~gFL~lla~fgi~s~Fd~del~~Lv~  156 (290)
T PF07899_consen   88 LLLEQLMR-----------ISPEISPEVKEEAKKLAEEWKSKLDGVNNENSLEALGFLQLLAAFGIVSEFDEDELLKLVV  156 (290)
T ss_pred             HHHHHHhh-----------cCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHcCCccccCHHHHHHHHH
Confidence            99999985           456899999999999999999999 778889999999999999999999999999999999


Q ss_pred             hhhchhhHHHHHHHcCCCcchHHHHHHHHhcCcchHHHHHHHHhcCCCCCCChHHHHHHHHHhHHhhHHHhhcCCCCchh
Q 009377          263 DYASRRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSA  342 (536)
Q Consensus       263 ~va~rrqa~eL~~sLGL~~KmpdiI~~LI~kGk~IeAV~fi~aF~L~dkFpPvpLLKsyl~~aKk~~~~i~k~g~~s~~a  342 (536)
                      .|++|+|+++||++|||++||||||++||++||||+||+|||+|||+||||||||||+||+++|++++.++++++++ .+
T Consensus       157 ~va~~~~a~~L~~sLgl~~k~~d~V~~LI~~g~~ieAv~fi~~f~L~dkfpPv~lLk~yl~~~k~~~~~~~~~~~~~-~a  235 (290)
T PF07899_consen  157 SVARRKQAPELCRSLGLSDKMPDIVEKLIKKGKQIEAVRFIYAFGLVDKFPPVPLLKSYLEDSKKAAKRIRKKGNSS-EA  235 (290)
T ss_pred             HhcchHhhHHHHHHcCchhhhHHHHHHHHHCCCccchHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCh-HH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999887 99


Q ss_pred             hhhhhHHHHHHHHHHHHHHhhcccccccChhHHHHHHHHHHHHhhhhhccccC
Q 009377          343 TEESNNLELNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEKVKVERKKSSAA  395 (536)
Q Consensus       343 ~~ea~~kEl~aLkaViKcIEehKLEs~~p~~~L~kRI~qLEK~KaerKr~~~~  395 (536)
                      +++|++||+++||+|||||||||||++||+++|+|||.||||+|++|||++++
T Consensus       236 ~~ea~~kel~aL~~vikcIee~kLes~~~~~~l~kri~~Lek~~~~~kr~~~~  288 (290)
T PF07899_consen  236 QNEANEKELAALKSVIKCIEEHKLESEFPLEPLQKRIEQLEKQKADRKRAAEA  288 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccccChHHHHHHHHHHHHHHHHHhhcccc
Confidence            99999999999999999999999999999999999999999999999999764

This protein is probably nuclear and is required for the regulation of flowering time in the late-flowering phenotype. It is known to increase RNA levels of flowering locus C. Allelic variation at the FRIGIDA locus is a major determinant of natural variation in flowering time [].

>PF07035 Mic1: Colon cancer-associated protein Mic1-like; InterPro: IPR009755 This entry represents the C terminus (approximately 160 residues) of a number of proteins that resemble colon cancer-associated protein Mic1

Probab=94.84  E-value=0.12  Score=49.92  Aligned_cols=79  Identities=19%  Similarity=0.269  Sum_probs=57.7

Q ss_pred             HHHHHHHHHhCCCCCCChHHHHHHHHhhhc-----hhhHHHHHHHcCCCcchHHHHHHHHhcCcchHHHHHHHHhcCCCC
Q 009377          237 VMFLQMVFGFGLSSRFDQDFLRKLVMDYAS-----RRDMARLAACLGFGEKMEDIIAELVKSGKEIEAVYFASESGLTEK  311 (536)
Q Consensus       237 ~gFLqlLa~FGI~seFd~dEL~~Lv~~va~-----rrqa~eL~~sLGL~~KmpdiI~~LI~kGk~IeAV~fi~aF~L~dk  311 (536)
                      ...|+.+..|++..  |..+|..++.....     +.-+.+.++.||..+  ..||+.|+.+|+.++|++||...+-++.
T Consensus        45 ~~~L~qllq~~Vi~--DSk~lA~~LLs~~~~~~~~~Ql~lDMLkRL~~~~--~~iievLL~~g~vl~ALr~ar~~~~~~~  120 (167)
T PF07035_consen   45 FSQLHQLLQYHVIP--DSKPLACQLLSLGNQYPPAYQLGLDMLKRLGTAY--EEIIEVLLSKGQVLEALRYARQYHKVDS  120 (167)
T ss_pred             HHHHHHHHhhcccC--CcHHHHHHHHHhHccChHHHHHHHHHHHHhhhhH--HHHHHHHHhCCCHHHHHHHHHHcCCccc
Confidence            35667777777765  45666666655533     455666666666543  2477899999999999999999999999


Q ss_pred             CCChHHHH
Q 009377          312 FPPVSLLK  319 (536)
Q Consensus       312 FpPvpLLK  319 (536)
                      .||.-+|.
T Consensus       121 ~~~~~fLe  128 (167)
T PF07035_consen  121 VPARKFLE  128 (167)
T ss_pred             CCHHHHHH
Confidence            99876654

>KOG1923 consensus Rac1 GTPase effector FRL [Signal transduction mechanisms; Cytoskeleton]

Probab=82.49  E-value=9.6  Score=44.58  Aligned_cols=21  Identities=29%  Similarity=0.321  Sum_probs=13.6

Q ss_pred             CCCCCCCCCcccccccccccc
Q 009377          412 RGSGPPAFRPAKAAKFSNSSQ  432 (536)
Q Consensus       412 r~~~~~~~~pa~~~~~~~~~~  432 (536)
                      ++||+++.+||+.+-...+..
T Consensus       276 ~~S~s~ppppap~p~~~~~~a  296 (830)
T KOG1923|consen  276 PGSGSGPPPPAPLPHTAQSDA  296 (830)
T ss_pred             CCCCCCCCCCCCCCCcccccC
Confidence            367777777777766555444

>KOG0921 consensus Dosage compensation complex, subunit MLE [Transcription]

Probab=80.60  E-value=2.5  Score=50.28  Aligned_cols=38  Identities=13%  Similarity=0.152  Sum_probs=21.9

Q ss_pred             HHHHHHHHHHH--Hhhcccccc-cChhHHHHHHHHHHHHhh
Q 009377          350 ELNSIKAIIKC--VEDHKLESA-FSVDNLRKRATQLEKVKV  387 (536)
Q Consensus       350 El~aLkaViKc--IEehKLEs~-~p~~~L~kRI~qLEK~Ka  387 (536)
                      -|.+||+.++-  +|-.|--+. --+|+...|+.++=++-.
T Consensus      1097 cItgLr~AmEaLvvev~knPaiIsqLdpvnarllnmiRdIs 1137 (1282)
T KOG0921|consen 1097 CITGLRPAMEALVVEVCKNPAIISQLDPVNARLLNMIRDIS 1137 (1282)
T ss_pred             HHhhhHHHHHHHHHHHhcChhHhhccCchhHHHHHHHHHhc
Confidence            36667776653  344443322 225677788887776644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	536
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 2e-06
 Identities = 64/459 (13%), Positives = 148/459 (32%), Gaps = 123/459 (26%)

Query: 1   MATEVSIKTDRVEKFFED---------LKAQKTILSSCMQLFKSLTSHFTSLED---SLS 48
           +A +V   + +V+   +            + +T+L    +L   +  ++TS  D   ++ 
Sbjct: 166 VALDV-CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK 224

Query: 49  QKFKSLDSKFLSL--DSTSAQTLDSLSHRENSIPDRHNAAF----RLIHDHRDSALADFL 102
            +  S+ ++   L         L  L + +N+   +   AF    +++   R   + DFL
Sbjct: 225 LRIHSIQAELRRLLKSKPYENCLLVLLNVQNA---KAWNAFNLSCKILLTTRFKQVTDFL 281

Query: 103 KPPKFADLS--DTLKSLCRRMDSSGLL-KFIISKRKESVSLRTEISRA-------IWEAV 152
                  +S      +L    +   LL K++  + ++   L  E+          I E++
Sbjct: 282 SAATTTHISLDHHSMTLTPD-EVKSLLLKYLDCRPQD---LPREVLTTNPRRLSIIAESI 337

Query: 153 --DPSR------LVLDAVEEFLAQKREKVGVTDKR---WACGLLVQAIFPEGSG------ 195
               +       +  D +   +      +   + R           ++FP  +       
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL-----SVFPPSAHIPTILL 392

Query: 196 ----NNGKKAAVGPVHARKVVERAAGVVERWKEDFRDSELGPAEAVMFLQMVFGFGLSSR 251
                +  K+ V  V   K+ +    +VE+  ++   S       +  + +     L  +
Sbjct: 393 SLIWFDVIKSDVMVV-VNKLHKY--SLVEKQPKESTIS-------IPSIYLE----LKVK 438

Query: 252 FDQDFL--RKLVMDYASRRDMARLAACL-GFGEKMEDIIAELVKSGKEIEAVYFAS---- 304
            + ++   R +V  Y   +                 D               YF S    
Sbjct: 439 LENEYALHRSIVDHYNIPK-----TFDSDDLIPPYLD--------------QYFYSHIGH 479

Query: 305 ---ESGLTEK---FPPVSL----LKSHLRNSK--KNSTSILKN-----GNHSNSATEESN 347
                   E+   F  V L    L+  +R+     N++  + N       +     +   
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP 539

Query: 348 NLE--LNSIKAIIKCVEDHKLESAFSVDNLRKRATQLEK 384
             E  +N+I   +  +E++ + S ++  +L + A   E 
Sbjct: 540 KYERLVNAILDFLPKIEENLICSKYT--DLLRIALMAED 576

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 2e-06
 Identities = 64/461 (13%), Positives = 125/461 (27%), Gaps = 150/461 (32%)

Query: 89  LIHDHRDSALADFLKPPKFADLSDTLKSLCRRMDSSGLLKFIISKR--KESVSLRTEISR 146
           ++    D     F+      D+ D  KS             I+SK      +  +  +S 
Sbjct: 21  ILSVFED----AFVDNFDCKDVQDMPKS-------------ILSKEEIDHIIMSKDAVSG 63

Query: 147 A---IWEAVD-PSRLVLDAVEEFLAQKREKVGVTDKRWACGLLVQAIFPEGSGNNGKKAA 202
                W  +     +V   VEE L          + ++    L+  I  E    +     
Sbjct: 64  TLRLFWTLLSKQEEMVQKFVEEVLRI--------NYKF----LMSPIKTEQRQPSMMTRM 111

Query: 203 ----------VGPVHARKVVERAAGVVERWKEDFRDS--ELGPAEAVMFLQMVFGFGLSS 250
                        V A+  V R      +     R +  EL PA+ V  +  V G G + 
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSR-----LQPYLKLRQALLELRPAKNV-LIDGVLGSGKTW 165

Query: 251 RFDQDFLRKLVMDYASRRDMARLAACLGFG---------EKMEDIIAELVKSGKEIEAVY 301
                    + +D        ++   + F             E ++  L K   +I+  +
Sbjct: 166 ---------VALDVC--LS-YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 302 FASESGLTEKFPPVSLLKSHLRNSKKNSTSILKNGNHSNSATEESNNLELNSIKAIIKCV 361
            +     +     +  +++ LR        +LK+  + N        L L     ++  V
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRR-------LLKSKPYENC-------L-L-----VLLNV 253

Query: 362 EDHKLESAFSVDNLRKRATQLEKVKV---ERKKSSAATNSKPQNKRGHGASNSRGSGPPA 418
           ++ K  +AF++             K+    R K    T+        H + +        
Sbjct: 254 QNAKAWNAFNL-----------SCKILLTTRFKQ--VTDFLSAATTTHISLDHHSMT--- 297

Query: 419 FRPAKA----AKFSNSSQSFSRRNPAPKAQHSP------AARYSGPYGYPSQSVYEGPST 468
             P +      K+ +         P      +P      A               +G +T
Sbjct: 298 LTPDEVKSLLLKYLDCRPQ---DLPREVLTTNPRRLSIIAESIR-----------DGLAT 343

Query: 469 AHYASTYGVPHTQ-----SLAAIP----QQHYS----LPAD 496
                             SL  +     ++ +      P  
Sbjct: 344 WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS 384

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00