Citrus Sinensis ID: 009444

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530----
MDHSISSRSLSRSPSPSISPFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVLHHQEKAGRKTTEVINSERTTST
cccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccEEccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccccEEEccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccEEEccHHHHHHHHHccccEEEcccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHcccccccccEEEEcccccccccccHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEcHHHHHccccccccccHHHHHHHHHcccccccccHHHcHHHHHHccccHHHccccccccc
ccccEEEHHccccccccccccccHHHcccccccccccccccEEEEEEEEcccccccccccccccHHcccccEEcccccHHHHcccccccccccccccccEEEcccEEcccccccHEEEEcccccccccEEccccccEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEccccccccccccEEccHHHHHHHHccccEEEEcccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHcccccEEEEccccccccccccHHHHHHHHHHHcccEEEEEEccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccHEEEcccccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccEEEEEHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHHHHHccccccHHcccccccc
mdhsissrslsrspspsispfnskrmilnpvfhkfnfdsrnfeikplvsrqnrpVVVAVRSsnqkvhndgfvledvphltnflpdlpsypnplkksqaYAVVKQtfvspedavaqniviqkdsprgvhfrragprekvyfksDEVRACIVtcgglcpginTVIREIVCGLSYmygvdeilgieggyrgfyskntltlspkvVNDIHkrggtilrtsrgghdtnkivdniedrginqvyiiggdgtQKGAALIYKEVEKRGLQVavagipktidndiavIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLAsrdvdcclipespfylegpgglFEFIERQLKENGHMVIVVAEgagqefvaqsmpavdekdasgnRLLLDIGLWLTQKIKDHFTKVQKMMINMkyidptymiraipsngsdniYCTLLAHSAVHgamagftgftvgpvnsrhayipiarvTETQKTVKLTDRMWARLLAstnqpsflncSEVLHHQEKAGRKTTEVINSERTTST
mdhsissrslsrspspsispfnskrMILNPVFHKFNFDSRNFEikplvsrqnrpVVVAVRssnqkvhndgFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAqniviqkdsprgvhfrragprekvyfksdeVRACIVtcgglcpginTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRggtilrtsrgghdtnkivDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAvagipktidndIAVIDKSFGFDTAVEEAQRAINaahvevesvengVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIpiarvtetqktvKLTDRMWARLLAStnqpsflnCSEVLHHqekagrkttevinserttst
MDHsissrslsrspspsispFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVLHHQEKAGRKTTEVINSERTTST
*************************MILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQ**********SGNRLLLDIGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVL**********************
************************RMILNPVF*************************************GFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQ************NRLLLDIGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPSF*****************************
******************SPFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVLHH********************
******S**LSRSPSPSISPFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVLHHQEK*****************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDHSISSRSLSRSPSPSISPFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAxxxxxxxxxxxxxxxxxxxxxVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVLHHQEKAGRKTTEVINSERTTST
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query534 2.2.26 [Sep-21-2011]
Q9FKG3530 6-phosphofructokinase 4, yes no 0.985 0.992 0.752 0.0
Q94AA4489 6-phosphofructokinase 3 O no no 0.857 0.936 0.735 0.0
Q9C5J7485 6-phosphofructokinase 7 O no no 0.833 0.917 0.743 0.0
Q9M076462 6-phosphofructokinase 6 O no no 0.814 0.941 0.744 0.0
Q9M0F9473 6-phosphofructokinase 1 O no no 0.846 0.955 0.712 0.0
Q9FIK0444 6-phosphofructokinase 2 O no no 0.777 0.934 0.545 1e-136
Q8VYN6537 6-phosphofructokinase 5, no no 0.696 0.692 0.539 1e-115
Q59126341 Pyrophosphate--fructose 6 N/A no 0.601 0.941 0.332 8e-34
Q9AGC0341 Pyrophosphate--fructose 6 yes no 0.601 0.941 0.323 4e-33
B9LHK4356 6-phosphofructokinase OS= yes no 0.411 0.617 0.369 5e-30
>sp|Q9FKG3|K6PF4_ARATH 6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1 Back     alignment and function desciption
 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/529 (75%), Positives = 446/529 (84%), Gaps = 3/529 (0%)

Query: 6   SSRSLSRSPSPSISPFN-SKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVRSSNQ 64
           +S S   S  P+IS FN S  ++    F       +   + P +  Q R +        +
Sbjct: 3   ASISFLGSTKPNISLFNPSSNVLPRRDFPLPALKLKKVSVLPRILHQKRLIRAQCSDGFK 62

Query: 65  KVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSP 124
              +DGFVLEDVPHLT FLPDLPSYPNPLK+SQAYA+VK+TFVS ED VAQNIV+QK S 
Sbjct: 63  PEEDDGFVLEDVPHLTKFLPDLPSYPNPLKESQAYAIVKRTFVSSEDVVAQNIVVQKGSK 122

Query: 125 RGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEG 184
           RGVHFRRAGPRE+VYF+SDEV+ACIVTCGGLCPGINTVIREIVCGL+ MYGV+ ILGI+G
Sbjct: 123 RGVHFRRAGPRERVYFRSDEVKACIVTCGGLCPGINTVIREIVCGLNNMYGVNNILGIQG 182

Query: 185 GYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDG 244
           GYRGFYSKNT+ L+PKVVNDIHKRGGT L+TSRGGHDT KIVDNI+DRGINQVYIIGG G
Sbjct: 183 GYRGFYSKNTMNLTPKVVNDIHKRGGTFLQTSRGGHDTAKIVDNIQDRGINQVYIIGGGG 242

Query: 245 TQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVE 304
           TQKGA  IY+EVE+RGLQVAV+GIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVE
Sbjct: 243 TQKGAEKIYEEVERRGLQVAVSGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVE 302

Query: 305 SVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENG 364
           SVENGVGIVKLMGRYSGFI+M ATLA+RDVDCCLIPESPF+LEG GGLFEFIE +LKEN 
Sbjct: 303 SVENGVGIVKLMGRYSGFIAMIATLANRDVDCCLIPESPFFLEGKGGLFEFIEERLKENR 362

Query: 365 HMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMMINMKY 424
           HMVIV+AEGAGQ++VAQSM A + KDASGNRLLLD+GLWLTQ+IKDHFT V+KMMINMKY
Sbjct: 363 HMVIVIAEGAGQDYVAQSMRASETKDASGNRLLLDVGLWLTQQIKDHFTNVRKMMINMKY 422

Query: 425 IDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIPIARVTETQK 484
           IDPTYMIRAIPSN SDN+YCTLLA SAVHGAMAG++GFTVGPVNSRHAYIPI++VTE   
Sbjct: 423 IDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYSGFTVGPVNSRHAYIPISQVTEVTN 482

Query: 485 TVKLTDRMWARLLASTNQPSFLNCSEVLHHQEKAGRKTTEVINSERTTS 533
           TVKLTDRMWARLLASTNQPSFL     L  Q     +T E I++ + +S
Sbjct: 483 TVKLTDRMWARLLASTNQPSFLTGEGAL--QNVIDMETQEKIDNMKISS 529

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 1
>sp|Q94AA4|K6PF3_ARATH 6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1 Back     alignment and function description
>sp|Q9C5J7|K6PF7_ARATH 6-phosphofructokinase 7 OS=Arabidopsis thaliana GN=PFK7 PE=1 SV=1 Back     alignment and function description
>sp|Q9M076|K6PF6_ARATH 6-phosphofructokinase 6 OS=Arabidopsis thaliana GN=PFK6 PE=1 SV=1 Back     alignment and function description
>sp|Q9M0F9|K6PF1_ARATH 6-phosphofructokinase 1 OS=Arabidopsis thaliana GN=PFK1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FIK0|K6PF2_ARATH 6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=1 Back     alignment and function description
>sp|Q8VYN6|K6PF5_ARATH 6-phosphofructokinase 5, chloroplastic OS=Arabidopsis thaliana GN=PFK5 PE=1 SV=1 Back     alignment and function description
>sp|Q59126|PFP_AMYME Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Amycolatopsis methanolica GN=pfp PE=1 SV=2 Back     alignment and function description
>sp|Q9AGC0|PFP_AMYMD Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Amycolatopsis mediterranei GN=pfp PE=3 SV=1 Back     alignment and function description
>sp|B9LHK4|K6PF_CHLSY 6-phosphofructokinase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pfkA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query534
359490072533 PREDICTED: 6-phosphofructokinase 4, chlo 0.985 0.986 0.788 0.0
224112817443 predicted protein [Populus trichocarpa] 0.829 1.0 0.887 0.0
255539891522 phosphofructokinase, putative [Ricinus c 0.893 0.913 0.814 0.0
449458333529 PREDICTED: 6-phosphofructokinase 4, chlo 0.870 0.879 0.824 0.0
356535482522 PREDICTED: 6-phosphofructokinase 4, chlo 0.941 0.963 0.776 0.0
297793715530 phosphofructokinase family protein [Arab 0.938 0.945 0.773 0.0
22328001530 6-phosphofructokinase 4 [Arabidopsis tha 0.985 0.992 0.752 0.0
79331832529 6-phosphofructokinase 4 [Arabidopsis tha 0.983 0.992 0.752 0.0
357442761543 6-phosphofructokinase [Medicago truncatu 0.915 0.900 0.787 0.0
358346077551 6-phosphofructokinase [Medicago truncatu 0.915 0.887 0.774 0.0
>gi|359490072|ref|XP_002282309.2| PREDICTED: 6-phosphofructokinase 4, chloroplastic-like [Vitis vinifera] gi|297745021|emb|CBI38613.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  866 bits (2238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/539 (78%), Positives = 472/539 (87%), Gaps = 13/539 (2%)

Query: 1   MDHSISSRSLSRSPSPSISPFNSKRMILNPVFHKFNFDSRNFEIKPLVSRQNRPVVVAVR 60
           MD S+SS   +RS  P   P  S  +     F  ++F SRNF + PL+SRQNR +  A  
Sbjct: 1   MDLSLSS--FARSSIPP--PLKSCNLTSLSNFPNYSFKSRNFSLTPLISRQNRRIR-AQY 55

Query: 61  SSNQKVHNDG------FVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVA 114
           S N      G      FV+++VPHLTNFLPDLPSYPNPL+++ AY +VK+ FVSPED VA
Sbjct: 56  SCNSGSGGGGGGDDDGFVVDEVPHLTNFLPDLPSYPNPLQQNLAYTIVKKNFVSPEDVVA 115

Query: 115 QNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMY 174
           Q IV+QK SPRGVHFRRAGPREKVYFKS+EVRACIVTCGGLCPGINTVIREIVCGL+YMY
Sbjct: 116 QKIVVQKGSPRGVHFRRAGPREKVYFKSEEVRACIVTCGGLCPGINTVIREIVCGLNYMY 175

Query: 175 GVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGI 234
           GV +ILGIEGGYRGFYSKNT+ L+PKVVNDIHKRGGT LRTSRGGHDT+KIVDNI+DRGI
Sbjct: 176 GVHDILGIEGGYRGFYSKNTIQLTPKVVNDIHKRGGTFLRTSRGGHDTDKIVDNIQDRGI 235

Query: 235 NQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQR 294
           NQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQR
Sbjct: 236 NQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQR 295

Query: 295 AINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFE 354
           AINAAHVEVESVENGVGIVKLMGRYSGFI+M+ATLASRDVDCCLIPESPFYLEG GGLFE
Sbjct: 296 AINAAHVEVESVENGVGIVKLMGRYSGFIAMFATLASRDVDCCLIPESPFYLEGQGGLFE 355

Query: 355 FIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTK 414
           FIE++LKENGH+VIV+AEGAGQE+VAQSM AV EKDASGNRLLLD+GLWL+QKIKDHFTK
Sbjct: 356 FIEQRLKENGHVVIVLAEGAGQEYVAQSMHAVSEKDASGNRLLLDVGLWLSQKIKDHFTK 415

Query: 415 VQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYI 474
           VQKM +NMKYIDPTYMIRAIPSN SDNIYCTLLAHSAVHGAMAG+TGFT+GPV+SRHAYI
Sbjct: 416 VQKMAVNMKYIDPTYMIRAIPSNASDNIYCTLLAHSAVHGAMAGYTGFTIGPVSSRHAYI 475

Query: 475 PIARVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVLHHQEKAGRKTTEVINSERTTS 533
           PI RVTET KT+KLTDRMWARLL+STNQPSFL  S V+  QE+  ++T E+I++ + TS
Sbjct: 476 PIDRVTETTKTIKLTDRMWARLLSSTNQPSFLKGSPVM--QERVDKETIEMIDNMKITS 532

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224112817|ref|XP_002332698.1| predicted protein [Populus trichocarpa] gi|222832952|gb|EEE71429.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255539891|ref|XP_002511010.1| phosphofructokinase, putative [Ricinus communis] gi|223550125|gb|EEF51612.1| phosphofructokinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449458333|ref|XP_004146902.1| PREDICTED: 6-phosphofructokinase 4, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356535482|ref|XP_003536274.1| PREDICTED: 6-phosphofructokinase 4, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|297793715|ref|XP_002864742.1| phosphofructokinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297310577|gb|EFH41001.1| phosphofructokinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|22328001|ref|NP_200966.2| 6-phosphofructokinase 4 [Arabidopsis thaliana] gi|75171244|sp|Q9FKG3.1|K6PF4_ARATH RecName: Full=6-phosphofructokinase 4, chloroplastic; Short=Phosphofructokinase 4; AltName: Full=Phosphohexokinase 4; Flags: Precursor gi|9758473|dbj|BAB09002.1| pyrophosphate-fructose-6-phosphate 1-phosphotransferase-like protein [Arabidopsis thaliana] gi|20466456|gb|AAM20545.1| pyrophosphate-dependent phosphofructo-1-kinase-like protein [Arabidopsis thaliana] gi|22136390|gb|AAM91273.1| pyrophosphate-dependent phosphofructo-1-kinase-like protein [Arabidopsis thaliana] gi|332010109|gb|AED97492.1| 6-phosphofructokinase 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|79331832|ref|NP_001032120.1| 6-phosphofructokinase 4 [Arabidopsis thaliana] gi|332010110|gb|AED97493.1| 6-phosphofructokinase 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357442761|ref|XP_003591658.1| 6-phosphofructokinase [Medicago truncatula] gi|355480706|gb|AES61909.1| 6-phosphofructokinase [Medicago truncatula] Back     alignment and taxonomy information
>gi|358346077|ref|XP_003637099.1| 6-phosphofructokinase [Medicago truncatula] gi|355503034|gb|AES84237.1| 6-phosphofructokinase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query534
TAIR|locus:2151571530 PFK4 "phosphofructokinase 4" [ 0.921 0.928 0.785 6.5e-209
TAIR|locus:2136849489 PFK3 "phosphofructokinase 3" [ 0.857 0.936 0.735 8.8e-189
TAIR|locus:2165046485 PFK7 "phosphofructokinase 7" [ 0.833 0.917 0.743 1.3e-185
TAIR|locus:2134108462 PFK6 "phosphofructokinase 6" [ 0.814 0.941 0.744 2e-182
TAIR|locus:2118249473 PFK1 "phosphofructokinase 1" [ 0.868 0.980 0.697 1e-180
TAIR|locus:2160897444 PFK2 "phosphofructokinase 2" [ 0.777 0.934 0.545 2.4e-124
TAIR|locus:2041208537 PFK5 "phosphofructokinase 5" [ 0.692 0.689 0.542 2.4e-108
TIGR_CMR|CHY_1349361 CHY_1349 "phosphofructokinase" 0.610 0.903 0.304 3.3e-32
UNIPROTKB|P65690343 pfkA "6-phosphofructokinase" [ 0.576 0.897 0.321 1.2e-30
TIGR_CMR|CHY_1143321 CHY_1143 "6-phosphofructokinas 0.397 0.660 0.368 1.3e-28
TAIR|locus:2151571 PFK4 "phosphofructokinase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2020 (716.1 bits), Expect = 6.5e-209, P = 6.5e-209
 Identities = 388/494 (78%), Positives = 432/494 (87%)

Query:    40 RNFEIKPLVSRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAY 99
             +   + P +  Q R +        +   +DGFVLEDVPHLT FLPDLPSYPNPLK+SQAY
Sbjct:    38 KKVSVLPRILHQKRLIRAQCSDGFKPEEDDGFVLEDVPHLTKFLPDLPSYPNPLKESQAY 97

Query:   100 AVVKQTFVSPEDAVAQNIVIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGI 159
             A+VK+TFVS ED VAQNIV+QK S RGVHFRRAGPRE+VYF+SDEV+ACIVTCGGLCPGI
Sbjct:    98 AIVKRTFVSSEDVVAQNIVVQKGSKRGVHFRRAGPRERVYFRSDEVKACIVTCGGLCPGI 157

Query:   160 NTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGG 219
             NTVIREIVCGL+ MYGV+ ILGI+GGYRGFYSKNT+ L+PKVVNDIHKRGGT L+TSRGG
Sbjct:   158 NTVIREIVCGLNNMYGVNNILGIQGGYRGFYSKNTMNLTPKVVNDIHKRGGTFLQTSRGG 217

Query:   220 HDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVI 279
             HDT KIVDNI+DRGINQVYIIGG GTQKGA  IY+EVE+RGLQVAV+GIPKTIDNDIAVI
Sbjct:   218 HDTAKIVDNIQDRGINQVYIIGGGGTQKGAEKIYEEVERRGLQVAVSGIPKTIDNDIAVI 277

Query:   280 DKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLI 339
             DKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFI+M ATLA+RDVDCCLI
Sbjct:   278 DKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFIAMIATLANRDVDCCLI 337

Query:   340 PESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLD 399
             PESPF+LEG GGLFEFIE +LKEN HMVIV+AEGAGQ++VAQSM A + KDASGNRLLLD
Sbjct:   338 PESPFFLEGKGGLFEFIEERLKENRHMVIVIAEGAGQDYVAQSMRASETKDASGNRLLLD 397

Query:   400 IGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGF 459
             +GLWLTQ+IKDHFT V+KMMINMKYIDPTYMIRAIPSN SDN+YCTLLA SAVHGAMAG+
Sbjct:   398 VGLWLTQQIKDHFTNVRKMMINMKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGY 457

Query:   460 TGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVLHHQEKAG 519
             +GFTVGPVNSRHAYIPI++VTE   TVKLTDRMWARLLASTNQPSFL     L  Q    
Sbjct:   458 SGFTVGPVNSRHAYIPISQVTEVTNTVKLTDRMWARLLASTNQPSFLTGEGAL--QNVID 515

Query:   520 RKTTEVINSERTTS 533
              +T E I++ + +S
Sbjct:   516 METQEKIDNMKISS 529
GO:0003872 "6-phosphofructokinase activity" evidence=IEA;ISS;IDA
GO:0005524 "ATP binding" evidence=IEA
GO:0005945 "6-phosphofructokinase complex" evidence=IEA;ISS
GO:0006096 "glycolysis" evidence=IEA;ISS;IDA
GO:0009507 "chloroplast" evidence=ISM;IDA
TAIR|locus:2136849 PFK3 "phosphofructokinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165046 PFK7 "phosphofructokinase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134108 PFK6 "phosphofructokinase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118249 PFK1 "phosphofructokinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160897 PFK2 "phosphofructokinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041208 PFK5 "phosphofructokinase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1349 CHY_1349 "phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|P65690 pfkA "6-phosphofructokinase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1143 CHY_1143 "6-phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94AA4K6PF3_ARATH2, ., 7, ., 1, ., 1, 10.73530.85760.9366nono
Q9M0F9K6PF1_ARATH2, ., 7, ., 1, ., 1, 10.71200.84640.9556nono
Q9FKG3K6PF4_ARATH2, ., 7, ., 1, ., 1, 10.75230.98500.9924yesno
Q9M076K6PF6_ARATH2, ., 7, ., 1, ., 1, 10.74420.81460.9415nono
Q9C5J7K6PF7_ARATH2, ., 7, ., 1, ., 1, 10.74380.83330.9175nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.110.979
3rd Layer2.7.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00014270001
SubName- Full=Chromosome chr16 scaffold_10, whole genome shotgun sequence; (533 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00014624001
RecName- Full=Glucose-6-phosphate isomerase; EC=5.3.1.9; (340 aa)
     •• 0.926
GSVIVG00025935001
SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (563 aa)
  •  • •0.908
GSVIVG00013290001
SubName- Full=Chromosome undetermined scaffold_453, whole genome shotgun sequence; (561 aa)
  •  • •0.908
GSVIVG00015125001
RecName- Full=Glucose-6-phosphate isomerase; EC=5.3.1.9; (623 aa)
     •• 0.902
GSVIVG00038435001
SubName- Full=Chromosome chr16 scaffold_94, whole genome shotgun sequence; (620 aa)
     •  0.899
GSVIVG00038234001
RecName- Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; (420 aa)
     •  0.899
GSVIVG00036826001
RecName- Full=Fructose-bisphosphate aldolase; EC=4.1.2.13; (396 aa)
     •  0.899
GSVIVG00035963001
RecName- Full=Fructose-bisphosphate aldolase; EC=4.1.2.13; (398 aa)
     •  0.899
GSVIVG00034293001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (498 aa)
     •  0.899
GSVIVG00031957001
SubName- Full=Chromosome chr18 scaffold_61, whole genome shotgun sequence; (360 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query534
PLN02564484 PLN02564, PLN02564, 6-phosphofructokinase 0.0
PRK06830443 PRK06830, PRK06830, diphosphate--fructose-6-phosph 0.0
PTZ00286459 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Prov 0.0
PLN02884411 PLN02884, PLN02884, 6-phosphofructokinase 1e-162
COG0205347 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate 5e-65
TIGR02483324 TIGR02483, PFK_mixed, phosphofructokinase 4e-51
PRK03202320 PRK03202, PRK03202, 6-phosphofructokinase; Provisi 4e-48
cd00363338 cd00363, PFK, Phosphofructokinase, a key regulator 2e-39
TIGR02482301 TIGR02482, PFKA_ATP, 6-phosphofructokinase 4e-33
PRK14071360 PRK14071, PRK14071, 6-phosphofructokinase; Provisi 3e-30
cd00763317 cd00763, Bacterial_PFK, Phosphofructokinase, a key 7e-30
pfam00365279 pfam00365, PFK, Phosphofructokinase 9e-30
PTZ00287 1419 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisi 2e-20
PRK06555403 PRK06555, PRK06555, pyrophosphate--fructose-6-phos 3e-19
PRK14072416 PRK14072, PRK14072, 6-phosphofructokinase; Provisi 5e-19
TIGR02478 746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 6e-16
PTZ00468 1328 PTZ00468, PTZ00468, phosphofructokinase family pro 2e-15
TIGR02477539 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosp 3e-15
TIGR02478746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 1e-14
cd00765550 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a 3e-14
cd00764 762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 4e-14
cd00764762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 1e-11
PRK07085555 PRK07085, PRK07085, diphosphate--fructose-6-phosph 1e-11
PLN03028 610 PLN03028, PLN03028, pyrophosphate--fructose-6-phos 8e-10
PLN02251568 PLN02251, PLN02251, pyrophosphate-dependent phosph 5e-08
>gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase Back     alignment and domain information 
 Score =  973 bits (2518), Expect = 0.0
 Identities = 367/460 (79%), Positives = 418/460 (90%), Gaps = 2/460 (0%)

Query: 60  RSSNQKVHN--DGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNI 117
            SS  K+     G+VLEDVPHLT++LPDLP+YPNPL+ + AY+VVKQ FV+ +D VAQ I
Sbjct: 1   GSSKPKIVTGDAGYVLEDVPHLTDYLPDLPTYPNPLQDNPAYSVVKQYFVNEDDTVAQKI 60

Query: 118 VIQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVD 177
           V+ KDSPRG HFRRAGPR+KVYF+SDEVRACIVTCGGLCPG+NTVIREIVCGLSYMYGV 
Sbjct: 61  VVHKDSPRGTHFRRAGPRQKVYFESDEVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVT 120

Query: 178 EILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQV 237
            ILGI+GGYRGFYS+NT+ L+PKVVNDIHKRGGTIL TSRGGHDT+KIVD+I+DRGINQV
Sbjct: 121 RILGIDGGYRGFYSRNTIPLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQV 180

Query: 238 YIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAIN 297
           YIIGGDGTQKGA++IY+E+ +RGL+VAVAGIPKTIDNDI VIDKSFGFDTAVEEAQRAIN
Sbjct: 181 YIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAIN 240

Query: 298 AAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIE 357
           AAHVE ESVENG+G+VKLMGRYSGFI+MYATLASRDVDCCLIPESPFYLEG GGLFEFIE
Sbjct: 241 AAHVEAESVENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIE 300

Query: 358 RQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQK 417
           ++LKENGHMVIVVAEGAGQ+ +A+SM + D +DASGN+LLLD+GLWL+QKIKDHFTKV+K
Sbjct: 301 KRLKENGHMVIVVAEGAGQDLIAESMESSDLQDASGNKLLLDVGLWLSQKIKDHFTKVKK 360

Query: 418 MMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIPIA 477
           M IN+KYIDPTYMIRAIPSN SDN+YCTLLAHSAVHGAMAG+TGFTVGPVN RHAYIP  
Sbjct: 361 MPINLKYIDPTYMIRAIPSNASDNVYCTLLAHSAVHGAMAGYTGFTVGPVNGRHAYIPFY 420

Query: 478 RVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVLHHQEK 517
           R+TE Q  V +TDRMWARLL+STNQPSFL+  +VL  + +
Sbjct: 421 RITEKQNKVVITDRMWARLLSSTNQPSFLSPKDVLEAKRE 460

Length = 484
>gnl|CDD|235869 PRK06830, PRK06830, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|185539 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>gnl|CDD|178472 PLN02884, PLN02884, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|223283 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233887 TIGR02483, PFK_mixed, phosphofructokinase Back     alignment and domain information
>gnl|CDD|235111 PRK03202, PRK03202, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|238216 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|213713 TIGR02482, PFKA_ATP, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|184487 PRK14071, PRK14071, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|238388 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase Back     alignment and domain information
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|180620 PRK06555, PRK06555, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>gnl|CDD|237600 PRK14072, PRK14072, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein; Provisional Back     alignment and domain information
>gnl|CDD|131530 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>gnl|CDD|238390 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|235930 PRK07085, PRK07085, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|215543 PLN03028, PLN03028, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|215140 PLN02251, PLN02251, pyrophosphate-dependent phosphofructokinase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 534
PLN02564484 6-phosphofructokinase 100.0
PRK06830443 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
PTZ00286459 6-phospho-1-fructokinase; Provisional 100.0
PLN02884411 6-phosphofructokinase 100.0
PRK06555403 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
PRK14071360 6-phosphofructokinase; Provisional 100.0
TIGR02478745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
PRK14072416 6-phosphofructokinase; Provisional 100.0
TIGR02483324 PFK_mixed phosphofructokinase. Members of this fam 100.0
cd00363338 PFK Phosphofructokinase, a key regulatory enzyme i 100.0
cd00764762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
cd00763317 Bacterial_PFK Phosphofructokinase, a key regulator 100.0
TIGR02482301 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokin 100.0
PRK03202320 6-phosphofructokinase; Provisional 100.0
TIGR02477539 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosp 100.0
COG0205347 PfkA 6-phosphofructokinase [Carbohydrate transport 100.0
PRK07085555 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
cd00764 762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
TIGR02478 745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
cd00765550 Pyrophosphate_PFK Phosphofructokinase, a key regul 100.0
PLN03028610 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
PLN02251568 pyrophosphate-dependent phosphofructokinase 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
PF00365282 PFK: Phosphofructokinase; InterPro: IPR000023 The 100.0
PTZ00287 1419 6-phosphofructokinase; Provisional 100.0
PTZ002871419 6-phosphofructokinase; Provisional 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
KOG2440 666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
KOG2440666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
PRK04761246 ppnK inorganic polyphosphate/ATP-NAD kinase; Revie 93.18
PRK04885265 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 91.79
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 90.96
PRK03501264 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 90.5
PRK00561259 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.86
PRK01911292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.53
PRK03372306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.44
PRK14075256 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 88.03
PF01513285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 87.73
PRK02649305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.55
PRK04539296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.4
PRK03378292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.21
PLN02929301 NADH kinase 86.88
TIGR01917431 gly_red_sel_B glycine reductase, selenoprotein B. 86.07
PLN02935508 Bifunctional NADH kinase/NAD(+) kinase 85.74
TIGR01918431 various_sel_PB selenoprotein B, glycine/betaine/sa 85.28
COG3199355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 84.26
PRK01231295 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 84.11
PRK10014342 DNA-binding transcriptional repressor MalI; Provis 83.88
PRK11914306 diacylglycerol kinase; Reviewed 83.31
PRK13054300 lipid kinase; Reviewed 83.15
PF00532279 Peripla_BP_1: Periplasmic binding proteins and sug 82.95
cd06321271 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-b 81.97
PRK03708277 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 81.85
PRK13337304 putative lipid kinase; Reviewed 81.37
PRK13055334 putative lipid kinase; Reviewed 80.91
PRK02645305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 80.55
PRK02155291 ppnK NAD(+)/NADH kinase family protein; Provisiona 80.22
>PLN02564 6-phosphofructokinase Back     alignment and domain information 
Probab=100.00  E-value=3.9e-122  Score=984.56  Aligned_cols=459  Identities=80%  Similarity=1.302  Sum_probs=437.6

Q ss_pred             cCCCcceeccccccccccCCCCcccccccchhhcCCCCCCCCCCCCCCcccccccccccccChHHHHHHHhccCCCCccc
Q 009444           49 SRQNRPVVVAVRSSNQKVHNDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRGVH  128 (534)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~~eav~~l~~~~P~~p~~~~~l~~n~~~~~~~~~~V~~t~~V~~~~~~~~~~~r~~~  128 (534)
                      .++.|+++|+          .||++|+||||.+|.|+.|++++||..|+.++.....||++++.|+..+..++...++.+
T Consensus         2 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~v~~~~~v~~~~~~~~~~~~~~~   71 (484)
T PLN02564          2 SSKPKIVTGD----------AGYVLEDVPHLTDYLPDLPTYPNPLQDNPAYSVVKQYFVNEDDTVAQKIVVHKDSPRGTH   71 (484)
T ss_pred             CCcCccccCC----------CceeeccCcchhhcCCCcCCCCCccCCCcccccccceEeCCCCeEEEeecccccccCCcc
Confidence            4678999999          999999999999999999999999999999999899999999999998876666678899


Q ss_pred             ccccCCccccccCCCCeeEEEEccCCCCchhhHHHHHHHHHHHHhCCCcEEEEEcccccccccCCcccCCHHHHhhHhhc
Q 009444          129 FRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKR  208 (534)
Q Consensus       129 F~~ag~r~~~~f~~~~~riaIvtsGG~aPGmNavIr~iv~~~~~~~~~~~V~Gi~~G~~GL~~~~~~~L~~~~V~~i~~~  208 (534)
                      |++||||+++||+|+++|||||||||||||||+|||++|+.+.+.|++.+||||++||+||+++++++|+|+.|++|+++
T Consensus        72 ~~~agpr~~i~f~p~~~riaIlTsGGd~PGmNavIRavv~~l~~~yg~~~V~Gi~~Gy~GL~~~~~i~Lt~~~V~~i~~~  151 (484)
T PLN02564         72 FRRAGPRQKVYFESDEVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVTRILGIDGGYRGFYSRNTIPLTPKVVNDIHKR  151 (484)
T ss_pred             ceecCCcceEEEcCcceEEEEECCCCCCccHhHHHHHHHHHHHHhCCCeEEEEEccChHHhCCCCeEeCCHHHhhcHhhC
Confidence            99999999999999999999999999999999999999999887788889999999999999999999999999999999


Q ss_pred             CCcceeecCCCchHHHHHHHHHHhCCcEEEEEcCCcchHHHHHHHHHHHHcCCceeEeeeccccccCccccCCCCChhhH
Q 009444          209 GGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTA  288 (534)
Q Consensus       209 GGs~LGTsR~~~d~~~iv~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vvgIPkTIDNDI~gtD~S~GFdTA  288 (534)
                      |||+|||||+++++++++++|++++||+||+|||||||++|++|+++++++|++|+||||||||||||++||+|||||||
T Consensus       152 GGTiLGTsR~~~~~~~iv~~L~~~~Id~LivIGGDGS~~gA~~L~e~~~~~g~~i~VIGIPKTIDNDI~~tD~T~GFdTA  231 (484)
T PLN02564        152 GGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFGFDTA  231 (484)
T ss_pred             CCceeccCCCcchHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHHHHHcCCCceEEEecccccCCCcCcccCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCceEEEEecCCCcchHHHHHhhhcCCCcEEecCCCCCCCCChhhHHHHHHHHHHhCCcEEE
Q 009444          289 VEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVI  368 (534)
Q Consensus       289 v~~~~~ai~~i~~~A~S~~~rv~iVEvMGR~sG~LAl~aaLAs~~ad~ilIPE~pf~le~~~~l~e~I~~rl~~~~~~vI  368 (534)
                      +++++++|+++++||.|+++||||||+|||+|||||+++|||+++||+|||||.||+++++.+++++|++|+++++|+||
T Consensus       232 v~~~~~aI~~i~~tA~S~~~rv~iVEvMGR~aG~LAl~aaLA~~gad~iLIPE~pf~le~~~~ll~~i~~rl~~~~~~VI  311 (484)
T PLN02564        232 VEEAQRAINAAHVEAESVENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMVI  311 (484)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEECCCCHHHHHHHHHHhhCCCCEEEeCCCCCCcchHHHHHHHHHHHHhccCCEEE
Confidence            99999999999999999988999999999999999999999996699999999999999988999999999999999999


Q ss_pred             EEeCCCCchhhcccCCccccccccCCcchhhhHHHHHHHHHhhccccceeEEeeeeeCCCccccCCCCChhhHHHHHHHH
Q 009444          369 VVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLA  448 (534)
Q Consensus       369 VvaEGa~~~~~~~~l~~~~~~Da~Gn~~l~~ig~~L~~~I~e~~~~~~~~~~~~k~i~pgy~qRg~~p~a~Dr~~a~~LG  448 (534)
                      |||||+++.++.+.......+|++||++|++++.||+++|+++++++.++.+++||++|||+|||++|+++|++||++||
T Consensus       312 VVAEGagq~~~~~~~~~~~~~Da~Gn~~l~dig~~La~~I~~~~~~~~~~~~~~r~i~lgy~qRgg~p~a~Dri~a~~lG  391 (484)
T PLN02564        312 VVAEGAGQDLIAESMESSDLQDASGNKLLLDVGLWLSQKIKDHFTKVKKMPINLKYIDPTYMIRAIPSNASDNVYCTLLA  391 (484)
T ss_pred             EEeCCCccchhhhhhcccccccccCCcccCcHHHHHHHHHHHHhhhcccCCceEEEecCCchhcCCCCcHHHHHHHHHHH
Confidence            99999998877665433356899999999999999999999999545556689999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCceEEEEeCCeeeeeeHHHHhhhcCCCCCCHHHHHHHHHhcCCCCCCChhhHhhhhhh
Q 009444          449 HSAVHGAMAGFTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVLHHQEK  517 (534)
Q Consensus       449 ~~AV~~~~~G~tg~mvgi~~~~~~~iPl~~v~~~~k~v~~~~~~w~~~l~~t~qp~f~~~~~~~~~~~~  517 (534)
                      +.|||++|+|+||+||+++|++++++||++++..+|+|++++++|.++|++||||+|++++++.+.+++
T Consensus       392 ~~AV~~~~aG~tg~mVg~~~~~~~~vPi~~~~~~~~~v~~~~~~w~~~l~~t~qp~f~~~~~~~~~~~~  460 (484)
T PLN02564        392 HSAVHGAMAGYTGFTVGPVNGRHAYIPFYRITEKQNKVVITDRMWARLLSSTNQPSFLSPKDVLEAKRE  460 (484)
T ss_pred             HHHHHHHHcCCCCEEEEEECCEEEEEEHHHHhccCCccCCChHHHHHHHHHcCCCCccCchhhhhhhhh
Confidence            999999999999999999999999999999999999999999999999999999999999999988864

>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PTZ00286 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>PLN02884 6-phosphofructokinase Back     alignment and domain information
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>PRK14071 6-phosphofructokinase; Provisional Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>PRK14072 6-phosphofructokinase; Provisional Back     alignment and domain information
>TIGR02483 PFK_mixed phosphofructokinase Back     alignment and domain information
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02482 PFKA_ATP 6-phosphofructokinase Back     alignment and domain information
>PRK03202 6-phosphofructokinase; Provisional Back     alignment and domain information
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PLN02251 pyrophosphate-dependent phosphofructokinase Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [] Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed Back     alignment and domain information
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02929 NADH kinase Back     alignment and domain information
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B Back     alignment and domain information
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase Back     alignment and domain information
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK10014 DNA-binding transcriptional repressor MalI; Provisional Back     alignment and domain information
>PRK11914 diacylglycerol kinase; Reviewed Back     alignment and domain information
>PRK13054 lipid kinase; Reviewed Back     alignment and domain information
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators Back     alignment and domain information
>cd06321 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems Back     alignment and domain information
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK13337 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK13055 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query534
2hig_A487 Crystal Structure Of Phosphofructokinase Apoenzyme 1e-75
1mto_A319 Crystal Structure Of A Phosphofructokinase Mutant F 1e-22
3pfk_A319 Phosphofructokinase. Structure And Control Length = 4e-22
6pfk_A319 Phosphofructokinase, Inhibited T-State Length = 319 4e-22
4a3s_A319 Crystal Structure Of Pfk From Bacillus Subtilis Len 4e-21
1pfk_A320 Crystal Structure Of The Complex Of Phosphofructoki 4e-19
1zxx_A319 The Crystal Structure Of Phosphofructokinase From L 4e-18
1kzh_A555 Structure Of A Pyrophosphate-dependent Phosphofruct 4e-15
3opy_B 941 Crystal Structure Of Pichia Pastoris Phosphofructok 2e-11
3k2q_A420 Crystal Structure Of Pyrophosphate-Dependent Phosph 1e-10
3o8o_A 787 Structure Of Phosphofructokinase From Saccharomyces 1e-10
3o8l_A 762 Structure Of Phosphofructokinase From Rabbit Skelet 1e-09
3opy_A 989 Crystal Structure Of Pichia Pastoris Phosphofructok 3e-09
3o8o_B 766 Structure Of Phosphofructokinase From Saccharomyces 9e-09
3hno_A419 Crystal Structure Of Pyrophosphate-Dependent Phosph 4e-04
>pdb|2HIG|A Chain A, Crystal Structure Of Phosphofructokinase Apoenzyme From Trypanosoma Brucei. Length = 487 Back     alignment and structure 
Iteration: 1

 Score =  280 bits (716), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/419 (39%), Positives = 241/419 (57%), Gaps = 27/419 (6%)
Query: 89  YPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPRG--------VHFRRAGPREKVYF 140
           YPNP KK  +    +  F    D +  N    +D P          +    A  R +++F
Sbjct: 39  YPNPSKKYSS----RTEFRDKTDYIMYNPR-PRDEPSSENPVSVSPLLCELAAARSRIHF 93
Query: 141 KSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLT---L 197
              E    IVTCGG+CPG+N VIR I      +Y V  ++G   GY G   K + T   L
Sbjct: 94  NPTETTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIEL 153
Query: 198 SPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVE 257
               V +IH  GGTIL +SRG  D  ++VD +E  G+N ++ +GGDGTQ+GA +I +E +
Sbjct: 154 HRGRVTNIHHYGGTILGSSRGPQDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAK 213
Query: 258 KRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVKLMG 317
           +RG+ ++V G+PKTIDND++   ++FGF TAVE+A +AI AA+ E  S   GVG+VKLMG
Sbjct: 214 RRGVDISVFGVPKTIDNDLSFSHRTFGFQTAVEKAVQAIRAAYAEAVSANYGVGVVKLMG 273
Query: 318 RYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAGQE 377
           R SGFI+  A +AS   + CL+PE+P   +    +   +ER+   +   VI+VAEG GQ+
Sbjct: 274 RDSGFIAAQAAVASAQANICLVPENPISEQ---EVMSLLERRFCHSRSCVIIVAEGFGQD 330
Query: 378 FVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMMI---NMKYIDPTYMIRAI 434
           +   S       DASGN+ L+DIG+ LT+K+K  F K  K       +KYIDP+YMIRA 
Sbjct: 331 WGRGS----GGYDASGNKKLIDIGVILTEKVK-AFLKANKSRYPDSTVKYIDPSYMIRAC 385
Query: 435 PSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMW 493
           P + +D ++C  LA  AVH AMAG TG  +   ++ +  +PI   T  ++ + L  ++W
Sbjct: 386 PPSANDALFCATLATLAVHEAMAGATGCIIAMRHNNYILVPIKVATSVRRVLDLRGQLW 444
>pdb|1MTO|A Chain A, Crystal Structure Of A Phosphofructokinase Mutant From Bacillus Stearothermophilus Bound With Fructose-6-Phosphate Length = 319 Back     alignment and structure
>pdb|3PFK|A Chain A, Phosphofructokinase. Structure And Control Length = 319 Back     alignment and structure
>pdb|6PFK|A Chain A, Phosphofructokinase, Inhibited T-State Length = 319 Back     alignment and structure
>pdb|4A3S|A Chain A, Crystal Structure Of Pfk From Bacillus Subtilis Length = 319 Back     alignment and structure
>pdb|1PFK|A Chain A, Crystal Structure Of The Complex Of Phosphofructokinase From Escherichia Coli With Its Reaction Products Length = 320 Back     alignment and structure
>pdb|1ZXX|A Chain A, The Crystal Structure Of Phosphofructokinase From Lactobacillus Delbrueckii Length = 319 Back     alignment and structure
>pdb|1KZH|A Chain A, Structure Of A Pyrophosphate-dependent Phosphofructokinase From The Lyme Disease Spirochete Borrelia Burgdorferi Length = 555 Back     alignment and structure
>pdb|3OPY|B Chain B, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 941 Back     alignment and structure
>pdb|3K2Q|A Chain A, Crystal Structure Of Pyrophosphate-Dependent Phosphofructokinase From Marinobacter Aquaeolei, Northeast Structural Genomics Consortium Target Mqr88 Length = 420 Back     alignment and structure
>pdb|3O8O|A Chain A, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 787 Back     alignment and structure
>pdb|3O8L|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal Muscle Length = 762 Back     alignment and structure
>pdb|3OPY|A Chain A, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 989 Back     alignment and structure
>pdb|3O8O|B Chain B, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 766 Back     alignment and structure
>pdb|3HNO|A Chain A, Crystal Structure Of Pyrophosphate-Dependent Phosphofructokinase From Nitrosospira Multiformis. Northeast Structural Genomics Consortium Target Id Nmr42 Length = 419 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query534
2hig_A487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 0.0
2f48_A555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 2e-93
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 4e-54
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 4e-54
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 3e-53
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 1e-52
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 2e-46
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 3e-38
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 5e-46
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 2e-41
3o8o_A787 6-phosphofructokinase subunit alpha; transferase; 1e-45
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 3e-39
3opy_A989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 1e-45
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 2e-40
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 6e-44
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 2e-39
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Length = 487 Back     alignment and structure
 Score =  569 bits (1469), Expect = 0.0
 Identities = 176/486 (36%), Positives = 263/486 (54%), Gaps = 29/486 (5%)

Query: 60  RSSNQKVHNDGFVLEDVPHLTNFLPDLP--SYPNPLKKSQAYAVVKQTFVSPEDAVAQNI 117
           R +++ V     +L  V      +  LP   YPNP KK  +       F    D +  N 
Sbjct: 8   RVTSKLVKAHRAMLNSVTQEDLKVDRLPGADYPNPSKKYSSR----TEFRDKTDYIMYNP 63

Query: 118 VIQKD-------SPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGL 170
             + +       S   +    A  R +++F   E    IVTCGG+CPG+N VIR I    
Sbjct: 64  RPRDEPSSENPVSVSPLLCELAAARSRIHFNPTETTIGIVTCGGICPGLNDVIRSITLTG 123

Query: 171 SYMYGVDEILGIEGGYRGFY---SKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVD 227
             +Y V  ++G   GY G     S+  + L    V +IH  GGTIL +SRG  D  ++VD
Sbjct: 124 INVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHYGGTILGSSRGPQDPKEMVD 183

Query: 228 NIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDT 287
            +E  G+N ++ +GGDGTQ+GA +I +E ++RG+ ++V G+PKTIDND++   ++FGF T
Sbjct: 184 TLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQT 243

Query: 288 AVEEAQRAINAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLE 347
           AVE+A +AI AA+ E  S   GVG+VKLMGR SGFI+  A +AS   + CL+PE+P   +
Sbjct: 244 AVEKAVQAIRAAYAEAVSANYGVGVVKLMGRDSGFIAAQAAVASAQANICLVPENPISEQ 303

Query: 348 GPGGLFEFIERQLKENGHMVIVVAEGAGQEFVAQSMPAVDEKDASGNRLLLDIGLWLTQK 407
               +   +ER+   +   VI+VAEG GQ++           DASGN+ L+DIG+ LT+K
Sbjct: 304 ---EVMSLLERRFCHSRSCVIIVAEGFGQDW----GRGSGGYDASGNKKLIDIGVILTEK 356

Query: 408 IKDHF--TKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVG 465
           +K      K +     +KYIDP+YMIRA P + +D ++C  LA  AVH AMAG TG  + 
Sbjct: 357 VKAFLKANKSRYPDSTVKYIDPSYMIRACPPSANDALFCATLATLAVHEAMAGATGCIIA 416

Query: 466 PVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPSFLNCSEVLHHQEKAGRKTTEV 525
             ++ +  +PI   T  ++ + L  ++W ++   T        S+V   ++   R+  E 
Sbjct: 417 MRHNNYILVPIKVATSVRRVLDLRGQLWRQVREITVDLG----SDVRLARKLEIRRELEA 472

Query: 526 INSERT 531
           IN  R 
Sbjct: 473 INRNRD 478
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Length = 555 Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Length = 419 Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Length = 319 Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Length = 319 Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Length = 320 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query534
2hig_A487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 100.0
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 100.0
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 100.0
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 100.0
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 100.0
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_A787 6-phosphofructokinase subunit alpha; transferase; 100.0
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 100.0
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
2f48_A555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 100.0
3opy_A989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 100.0
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 100.0
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
2an1_A292 Putative kinase; structural genomics, PSI, protein 94.76
2i2c_A272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 92.68
1z0s_A278 Probable inorganic polyphosphate/ATP-NAD kinase; A 90.75
3g1w_A305 Sugar ABC transporter; sugar-binding protein, baci 88.83
3kjx_A344 Transcriptional regulator, LACI family; LACL famil 88.81
3h5o_A339 Transcriptional regulator GNTR; transcription regu 86.65
3dbi_A338 Sugar-binding transcriptional regulator, LACI FAM; 85.28
3l49_A291 ABC sugar (ribose) transporter, periplasmic substr 84.85
1yt5_A258 Inorganic polyphosphate/ATP-NAD kinase; domain 1: 84.08
3o74_A272 Fructose transport system repressor FRUR; dual tra 80.03
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Back     alignment and structure
Probab=100.00  E-value=4.6e-103  Score=841.05  Aligned_cols=425  Identities=39%  Similarity=0.648  Sum_probs=384.3

Q ss_pred             CCCcccccccchhhcCCCC--CCCCCCCCCCcccccccccccccChHHHHHHHhccCC-------CCcccccccCCcccc
Q 009444           68 NDGFVLEDVPHLTNFLPDL--PSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDS-------PRGVHFRRAGPREKV  138 (534)
Q Consensus        68 ~~~~~~eav~~l~~~~P~~--p~~~~~l~~n~~~~~~~~~~V~~t~~V~~~~~~~~~~-------~r~~~F~~ag~r~~~  138 (534)
                      .-.+.++.|+.+.-..|.+  |++++||..|..    ...||.+++.|+..+....+.       .....|+++|||+++
T Consensus        16 ~~~~~~~~~~~~~~~i~~lg~~~~~~p~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~agpr~~i   91 (487)
T 2hig_A           16 AHRAMLNSVTQEDLKVDRLPGADYPNPSKKYSS----RTEFRDKTDYIMYNPRPRDEPSSENPVSVSPLLCELAAARSRI   91 (487)
T ss_dssp             CTTCSCSSCCTTTTCCEECSCCCEECTTCCGGG----GGGSBSSCCEEESCCCBCC-----CCBBSCCCEEEECCCBSEE
T ss_pred             cccccccCCCccccccCcCCCCCCCCcccccCC----CCeeeCCCCEEEEeeeccCCCccccccccchHHHHHcCCccee
Confidence            3557888888886666655  778899976654    588999999998765432221       123479999999999


Q ss_pred             ccCCCCeeEEEEccCCCCchhhHHHHHHHHHHHHhCCCcEEEEEccccccccc---CCcccCCHHHHhhHhhcCCcceee
Q 009444          139 YFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYS---KNTLTLSPKVVNDIHKRGGTILRT  215 (534)
Q Consensus       139 ~f~~~~~riaIvtsGG~aPGmNavIr~iv~~~~~~~~~~~V~Gi~~G~~GL~~---~~~~~L~~~~V~~i~~~GGs~LGT  215 (534)
                      ||+++.+||||+||||||||||+|||++|+++...|+..+||||++||+||++   +++++|+|++|++|+++|||+|||
T Consensus        92 ~f~~~~~rIgIltsGGdaPGmNaaIravv~~a~~~~g~~~V~Gi~~G~~GLl~~~~~~~~~L~~~~V~~i~~~GGTiLGT  171 (487)
T 2hig_A           92 HFNPTETTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHYGGTILGS  171 (487)
T ss_dssp             SSCGGGCEEEEEECSSCCTTHHHHHHHHHHHHHHHHCCSEEEECSTGGGGGSHHHHTTCEEECHHHHTTGGGSSSCSSCC
T ss_pred             eecCCCcEEEEEecCCCcchhhHHHHHHHHHHHHhCCCcEEEEEccCHHHhhhccCCCEEECCHHHHHHHHhCCCCeecc
Confidence            99999999999999999999999999999999766676799999999999964   689999999999999999999999


Q ss_pred             cCCCchHHHHHHHHHHhCCcEEEEEcCCcchHHHHHHHHHHHHcCCceeEeeeccccccCccccCCCCChhhHHHHHHHH
Q 009444          216 SRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRA  295 (534)
Q Consensus       216 sR~~~d~~~iv~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vvgIPkTIDNDI~gtD~S~GFdTAv~~~~~a  295 (534)
                      +|++++.++++++|++++||+||+||||||+++|++|++++.+++++|+||||||||||||++||+|||||||+++++++
T Consensus       172 sR~~~~~~~i~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vVGIPkTIDNDl~gTD~T~GFdTAv~~~~ea  251 (487)
T 2hig_A          172 SRGPQDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQTAVEKAVQA  251 (487)
T ss_dssp             CCSCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEECCTTSSCCCSSCCTTHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHHHHHHHhCCCceEEeccccccCCCCCCCCCCCHHHHHHHHHHH
Confidence            99998899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhcCCceEEEEecCCCcchHHHHHhhhcCCCcEEecCCCCCCCCChhhHHHHHHHHHHhCCcEEEEEeCCCC
Q 009444          296 INAAHVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKENGHMVIVVAEGAG  375 (534)
Q Consensus       296 i~~i~~~A~S~~~rv~iVEvMGR~sG~LAl~aaLAs~~ad~ilIPE~pf~le~~~~l~e~I~~rl~~~~~~vIVvaEGa~  375 (534)
                      |+++++||.||++||||||||||+|||||+++|||+++||+|||||+||+++   ++++.|++|+++++|+|||||||++
T Consensus       252 Id~i~~tA~Sh~~rv~vVEVMGR~aG~LAl~agLA~g~ad~ilIPE~p~~l~---~i~~~i~~r~~~k~~~IIvVaEGag  328 (487)
T 2hig_A          252 IRAAYAEAVSANYGVGVVKLMGRDSGFIAAQAAVASAQANICLVPENPISEQ---EVMSLLERRFCHSRSCVIIVAEGFG  328 (487)
T ss_dssp             HHHHHHHHHTSTTEEEEEEECCSSCCHHHHHHHHHHTCCSEEECTTSCCCHH---HHHHHHHHHTTSCSEEEEEEETTTT
T ss_pred             HHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHhhCCCCEEEeCCCCCCHH---HHHHHHHHHHhcCCcEEEEEeCCCc
Confidence            9999999999978999999999999999999999993399999999999987   8999999999888999999999998


Q ss_pred             chhhcccCCccccccccCCcchhhhHHHHHHHHHhhccccceeE---EeeeeeCCCccccCCCCChhhHHHHHHHHHHHH
Q 009444          376 QEFVAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMM---INMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAV  452 (534)
Q Consensus       376 ~~~~~~~l~~~~~~Da~Gn~~l~~ig~~L~~~I~e~~~~~~~~~---~~~k~i~pgy~qRg~~p~a~Dr~~a~~LG~~AV  452 (534)
                      +.++..    ...+|++||+++++++.+|+++|+++++.. ...   +++|+++|||+|||++||++||+||++||..||
T Consensus       329 ~~~~~~----~~~~Da~G~~~l~~i~~~l~~~i~~~~~~~-g~~~~~f~~R~~~lGh~QRgg~Psa~Dr~la~~lG~~AV  403 (487)
T 2hig_A          329 QDWGRG----SGGYDASGNKKLIDIGVILTEKVKAFLKAN-KSRYPDSTVKYIDPSYMIRACPPSANDALFCATLATLAV  403 (487)
T ss_dssp             GGGCCC------CBCTTSCBCCCCHHHHHHHHHHHHHHTT-TTTSSSCEEEEECCHHHHHSSCCCHHHHHHHHHHHHHHH
T ss_pred             cccccc----ccccccccCcchhHHHHHHHHHHHHHHhhc-CccccccceEEccCCcCccCCCCCHHHHHHHHHHHHHHH
Confidence            765432    235899999999999999999999988421 112   378999999999999999999999999999999


Q ss_pred             HHHHcCCCceEEEEeCCeeeeeeHHHHhhhcCCCCCCHHHHHHHHHhcCCCC
Q 009444          453 HGAMAGFTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLLASTNQPS  504 (534)
Q Consensus       453 ~~~~~G~tg~mvgi~~~~~~~iPl~~v~~~~k~v~~~~~~w~~~l~~t~qp~  504 (534)
                      +++++|+||+||++++++++++||++++...|++++++.||.++++.++||.
T Consensus       404 ~~l~~G~tg~mVgi~~~~i~~vPl~ev~~~~k~v~~~~~~w~~~~~~~~~~~  455 (487)
T 2hig_A          404 HEAMAGATGCIIAMRHNNYILVPIKVATSVRRVLDLRGQLWRQVREITVDLG  455 (487)
T ss_dssp             HHHHTTEESEEEEEETTEEEEEEHHHHTTEEEEECTTSHHHHHHHHHSCCCC
T ss_pred             HHHHcCCCCEEEEEECCEEEEEEHHHHHccCCCcCcchHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999999999999999999987
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125} Back     alignment and structure
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi} Back     alignment and structure
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum} Back     alignment and structure
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12} Back     alignment and structure
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides} Back     alignment and structure
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} Back     alignment and structure
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 534
d2f48a1550 c.89.1.1 (A:4-553) Pyrophosphate-dependent phospho 9e-75
d1pfka_320 c.89.1.1 (A:) ATP-dependent phosphofructokinase {E 1e-57
d4pfka_319 c.89.1.1 (A:) ATP-dependent phosphofructokinase {B 3e-57
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Length = 550 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: Pyrophosphate-dependent phosphofructokinase
species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

 Score =  244 bits (624), Expect = 9e-75
 Identities = 89/481 (18%), Positives = 169/481 (35%), Gaps = 88/481 (18%)

Query: 87  PSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVIQKDSPR-----GVHFRRAGPREKVYFK 141
           P  PN LKK   +  +   +    +A+     +++          + F            
Sbjct: 12  PKLPNILKK--DFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEGESSLS---F 66

Query: 142 SDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKV 201
           S  +   I+  GG  PG + VI  +   +       ++ G +GG  G    + + L+  +
Sbjct: 67  SKALNIGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESL 126

Query: 202 VNDIHKRGGTILRTSRGGH-----DTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEV 256
           +N     GG  + +S           NK +   ++  +N + IIGGD +   AA++ +  
Sbjct: 127 INSYRNTGGFDIVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYF 186

Query: 257 EKRGLQVAVAGIPKTIDNDIA--VIDKSFGFDTAVEEAQRAINAAHVEVESVENGVGIVK 314
           +K G  + V G+PKTID D+    I+ SFGFD+A +     I     +  S +     VK
Sbjct: 187 KKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVK 246

Query: 315 LMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFI-----ERQLKENGHMVIV 369
           LMGR +  +++   L +    C +  E     +    + + +     +R L  +   V++
Sbjct: 247 LMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVI 306

Query: 370 VAEGAG----------------------------------------------------QE 377
           V EG                                                        
Sbjct: 307 VPEGLIEFIPEVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLF 366

Query: 378 FVAQSMPAVDEKDASGNRLLLDI--GLWLTQKIKDHFTKVQKMMINMKYIDP-----TYM 430
              + + ++ E+D  GN  +  +       + I+     ++K         P      Y 
Sbjct: 367 IQFELIKSILERDPHGNFNVSRVPTEKLFIEMIQSRLNDMKKRGEYKGSFTPVDHFFGYE 426

Query: 431 IRAIPSNGSDNIYCTLLAHSAVHGAMAGFTGFTVGPVN-SRHAY------IPIARVTETQ 483
            R+   +  D+ YC  L ++AV   + G TG+     N +          +P+  +   +
Sbjct: 427 GRSAFPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVPLTMLMNME 486

Query: 484 K 484
           +
Sbjct: 487 E 487
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Length = 320 Back     information, alignment and structure
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Length = 319 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query534
d4pfka_319 ATP-dependent phosphofructokinase {Bacillus stearo 100.0
d1pfka_320 ATP-dependent phosphofructokinase {Escherichia col 100.0
d2f48a1550 Pyrophosphate-dependent phosphofructokinase {Lyme 100.0
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 84.65
d1ig3a2169 Thiamin pyrophosphokinase, catalytic domain {Mouse 83.37
d1z0sa1249 Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa 82.37
d1s1ma1258 CTP synthase PyrG, C-terminal domain {Escherichia 81.45
d2qv7a1312 Diacylglycerol kinase DgkB {Staphylococcus aureus 81.16
d1dbqa_282 Purine repressor (PurR), C-terminal domain {Escher 80.07
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: ATP-dependent phosphofructokinase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=2.2e-81  Score=643.65  Aligned_cols=310  Identities=29%  Similarity=0.434  Sum_probs=282.9

Q ss_pred             eeEEEEccCCCCchhhHHHHHHHHHHHHhCCCcEEEEEcccccccccCCcccCCHHHHhhHhhcCCcceeecCCC-----
Q 009444          145 VRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGG-----  219 (534)
Q Consensus       145 ~riaIvtsGG~aPGmNavIr~iv~~~~~~~~~~~V~Gi~~G~~GL~~~~~~~L~~~~V~~i~~~GGs~LGTsR~~-----  219 (534)
                      +|||||||||||||||++|+++++.+.. + +.+|||+++||+||+++++++|+|+++++|+++|||+|||+|++     
T Consensus         2 krIaIl~sGG~~pgiNa~i~~~v~~~~~-~-~~~v~g~~~G~~Gl~~~~~~~l~~~~~~~~~~~gGt~lgs~r~~~~~~~   79 (319)
T d4pfka_           2 KRIGVLTSGGDSPGMNAAIRSVVRKAIY-H-GVEVYGVYHGYAGLIAGNIKKLEVGDVGDIIHRGGTILYTARCPEFKTE   79 (319)
T ss_dssp             CEEEEEEESSCCTTHHHHHHHHHHHHHH-T-TCEEEEESSHHHHHHTTCEEEECGGGGTTCTTCCSCTTCCCCCTTSSSH
T ss_pred             CEEEEECcCCCcHHHHHHHHHHHHHHHH-C-CCEEEEEccchHHhcCCCcccCCHHHHHHHHhcCccccccCCCCccccc
Confidence            4999999999999999999999998864 3 46999999999999999999999999999999999999999974     


Q ss_pred             chHHHHHHHHHHhCCcEEEEEcCCcchHHHHHHHHHHHHcCCceeEeeeccccccCccccCCCCChhhHHHHHHHHHHHH
Q 009444          220 HDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGLQVAVAGIPKTIDNDIAVIDKSFGFDTAVEEAQRAINAA  299 (534)
Q Consensus       220 ~d~~~iv~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vvgIPkTIDNDI~gtD~S~GFdTAv~~~~~ai~~i  299 (534)
                      +++++++++|++++||+||+|||||||++|++|+++      .++|||||||||||+++||+||||+||+++++++|+++
T Consensus        80 ~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~L~~~------~~~vvgIPkTIDNDl~~td~t~Gf~TA~~~~~~~i~~l  153 (319)
T d4pfka_          80 EGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEH------GFPCVGVPGTIDNDIPGTDFTIGFDTALNTVIDAIDKI  153 (319)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCSSCCCTTCSSCBTHHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHHhccceEEEecCchHHHHHHHHHhc------cCceeeeeeeccCCcCCccccccHHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999763      47799999999999999999999999999999999999


Q ss_pred             HHhhhhcCCceEEEEecCCCcchHHHHHhhhcCCCcEEecCCCCCCCCChhhHHHHHHHHHHh-CCcEEEEEeCCCCchh
Q 009444          300 HVEVESVENGVGIVKLMGRYSGFISMYATLASRDVDCCLIPESPFYLEGPGGLFEFIERQLKE-NGHMVIVVAEGAGQEF  378 (534)
Q Consensus       300 ~~~A~S~~~rv~iVEvMGR~sG~LAl~aaLAs~~ad~ilIPE~pf~le~~~~l~e~I~~rl~~-~~~~vIVvaEGa~~~~  378 (534)
                      +.+|+|++ ||||||+|||+|||||++++||+ +||+|||||.||+++   ++++.|++++++ +++++||||||+... 
T Consensus       154 ~~~a~s~~-rv~ivEvMGR~aG~lA~~~~la~-~a~~iliPE~~~~~~---~~~~~i~~~~~~~k~~~ivvvsEG~~~~-  227 (319)
T d4pfka_         154 RDTATSHE-RTYVIEVMGRHAGDIALWSGLAG-GAETILIPEADYDMN---DVIARLKRGHERGKKHSIIIVAEGVGSG-  227 (319)
T ss_dssp             HHHHHHTT-CEEEEEECCSSCCHHHHHHHHHT-TCSEEECTTSCCCHH---HHHHHHHHHHHTTCSCEEEEEETTTCCH-
T ss_pred             HhhcccCc-ceEEEEecCCCCcHHHHHhhccC-CCcEEEecCCCCCHH---HHHHHHHHHHhhcCCeeEEEEecccchh-
Confidence            99999875 79999999999999999999999 899999999999877   899999998877 688999999999642 


Q ss_pred             hcccCCccccccccCCcchhhhHHHHHHHHHhhccccceeEEeeeeeCCCccccCCCCChhhHHHHHHHHHHHHHHHHcC
Q 009444          379 VAQSMPAVDEKDASGNRLLLDIGLWLTQKIKDHFTKVQKMMINMKYIDPTYMIRAIPSNGSDNIYCTLLAHSAVHGAMAG  458 (534)
Q Consensus       379 ~~~~l~~~~~~Da~Gn~~l~~ig~~L~~~I~e~~~~~~~~~~~~k~i~pgy~qRg~~p~a~Dr~~a~~LG~~AV~~~~~G  458 (534)
                                             ..+.+.+++..+      +++|+..|||+|||++|+++||.+|++||..||+++++|
T Consensus       228 -----------------------~~~~~~i~~~~g------~~~r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~g  278 (319)
T d4pfka_         228 -----------------------VDFGRQIQEATG------FETRVTVLGHVQRGGSPTAFDRVLASRLGARAVELLLEG  278 (319)
T ss_dssp             -----------------------HHHHHHHHHHHC------CCEEEEECGGGGGCSCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -----------------------hhhhhhhhhhcC------ceeEEeecCchhcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence                                   245666676654      457888999999999999999999999999999999999


Q ss_pred             CCceEEEEeCCeeeeeeHHHHhhhcCCCCCCHHHHHHHH
Q 009444          459 FTGFTVGPVNSRHAYIPIARVTETQKTVKLTDRMWARLL  497 (534)
Q Consensus       459 ~tg~mvgi~~~~~~~iPl~~v~~~~k~v~~~~~~w~~~l  497 (534)
                      +||+||+++++++.++||+++++++|.++++...+.+.|
T Consensus       279 ~sg~mv~i~~~~~~~vpl~~v~~~~k~v~~~l~~~~~~l  317 (319)
T d4pfka_         279 KGGRCVGIQNNQLVDHDIAEALANKHTIDQRMYALSKEL  317 (319)
T ss_dssp             CCSEEEEEETTEEEEEEHHHHTTSCCCCCHHHHHHHHHH
T ss_pred             CCCeEEEEECCEEEEEcHHHHHhcCCCCCHHHHHHHHhc
Confidence            999999999999999999999999998887654445544
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ig3a2 c.100.1.1 (A:10-178) Thiamin pyrophosphokinase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure