Citrus Sinensis ID: 009448

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530----
Protein Sequence
MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHEEccccccccHHHHHHHHHcccccEEEEccccccccccccccccHHHHHccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccEEEccccccccccccccccEcccccccccccccccccEcccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEHHHHcccHHccccccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
MEYERIHKaqtgiispsklrmkligphhnrkkdgsnsnsartspsrlddsEFVRNSllnggfddeapslevasekgagevvlghnqgeqasfqpnetlprentEVSRVKMqqfskgdsvnlsaihpmrmheddnldydsnassssfefhkgersmqnhmarsfsrpmpskwndAEKWIMNRQIIQANYAKKNALhnqanrlpatnmvrvvpeygtydhkpstvraadtkrvdfcqtashtlekfsfvpsgthqahggnamidsctqskdleeviqtdvpctksssenesvvPAIRSVCMrdmgtemtpvasqepsrtatpvgattplrsptssipstprgrapastpmeqtgidesqhpvenskrdlSEQEIKEKTRREIVALGVQLGKMNIAawaskdeqgkntssaeknsdmEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGeyirqtgqipsshftccgwf
Flexible Loop (DISEMBL)
meyerihkaqtgiispsklRMKLIGPhhnrkkdgsnsnsartspsrlddsEFVRNSLLNGGFDDEAPSLEVASEKGAGEVVLGHnqgeqasfqpnetlprENTEVSRVKmqqfskgdsvnlsaIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANYAKKNALHnqanrlpatnMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTdvpctksssenesvvpAIRSVCMRDMGTEmtpvasqepsrtatpvgattplrsptssipstprgraPASTPmeqtgidesqhpvenskrdlseqeikekTRREIVALGVQLGKMNIaawaskdeqgkntssaeknsdmeelERIEYEKRASAWAeaekskhiarfkreeikiqaWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMvkkismsrqrseeKRAAAearksrdaertaaqgeyirqtgqipsshFTCCGWF
Low Complexity Region (SEG)
MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGAttplrsptssipstpRGRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQrseekraaaearksrdaerTAAQGEYIRQTGQIPSSHFTCCGWF
Disordered region (IsUnstruct)
****************************************************************************************************************************************************************************DAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVP**********************************************************************************************************************************EIVALGVQLGKMNIAAW**********************************************************************************************************************************SHFTCCGW*
Disordered Region (DISOPRED)
*EYERIHKAQTGIISPSKLR***********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************RFKREEIKIQAWES****************************************************************RQTGQIPSSHFTCCGWF
Disordered Region (DISEMBL)
**********TGIISPSKLRMKLIGPH*********************DSEFVRNSLLNGGFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDV***********VVPAIRSVCMRDMGTE******************************************************************IKEKTRREIVALGVQLGKMNIAAWASK*****************ELERIEYEK***********KHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI***************************************QGEYIRQTGQIPSSHFTCCGWF
Disordered Region (DISPRO)
*EYERIHKAQTGIISPSKLRMKLIGPHHNRKKD********************************APSLEVASEK*********************************************************************************************SKWNDAEKWIMNR*****************************************************************************************************************R*VC*RDMGTEMTPV*********************************************************LSEQEIKEKTRREIVALGVQLGKMNIAAWASK****************EELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAE*******ERTA**GEYI**T*QIPSSHFTCCGWF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	534	2.2.26 [Sep-21-2011]
P93788	198	Remorin OS=Solanum tubero	N/A	no	0.215	0.580	0.363	3e-09
Q9M2D8	212	Uncharacterized protein A	no	no	0.209	0.528	0.354	2e-08
O80837	190	Remorin OS=Arabidopsis th	no	no	0.239	0.673	0.335	2e-08

>sp|P93788|REMO_SOLTU Remorin OS=Solanum tuberosum PE=1 SV=1

 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 6/121 (4%)

Query: 417 LERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI 473
           L R+  EKR S   AW E+EKSK   + +++   I AWE+ +KA LEAE++++E ++E+ 
Sbjct: 81  LARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKK 140

Query: 474 RAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGW 533
           +A+   KM  KI++  + +EEKRA  EA++  D  +        R TG  P       G 
Sbjct: 141 KAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKK---ILGI 197

Query: 534 F 534
           F
Sbjct: 198 F 198

Binds to both simple and complex galacturonides. May be involved in cell-to-cell signaling and molecular transport.
Solanum tuberosum (taxid: 4113)

>sp|Q9M2D8|Y3126_ARATH Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 74/124 (59%), Gaps = 12/124 (9%)

Query: 417 LERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI 473
           L  +  EKR S   AW E+EKSK   + +++   + AWE+ +KA +EA++++IE ++E+ 
Sbjct: 95  LADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKK 154

Query: 474 RAQAQAKMVKKISMSRQRSEEKRAAAEARKSRD---AERTAAQGEYIRQTGQIPSSHFTC 530
           +A+   +M  K++   + +EE+RA  EA++  D   AE TAA+    R TG +P +    
Sbjct: 155 KAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAK---YRATGIVPKA---T 208

Query: 531 CGWF 534
           CG F
Sbjct: 209 CGCF 212

Arabidopsis thaliana (taxid: 3702)

>sp|O80837|REMO_ARATH Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 404 NTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEM 463
           ++ SA+++  + +LE+ +      AW E+EKSK   R +++   + AWE+ +KA +EA++
Sbjct: 63  SSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQL 122

Query: 464 RRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQI 523
           R+IE ++E+ +AQ   KM  K++   + +EEKRA  EA+K  +  +    G   R TG +
Sbjct: 123 RKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVV 182

Query: 524 PSSHFTCCGWF 534
           P +    CG F
Sbjct: 183 PKA---TCGCF 190

Exhibits a non sequence-specific DNA-binding activity.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	534
441481999	541	remorin-3 protein [Dimocarpus longan]	0.996	0.983	0.773	0.0
255584507	535	DNA binding protein, putative [Ricinus c	0.983	0.981	0.703	0.0
225443950	526	PREDICTED: uncharacterized protein LOC10	0.973	0.988	0.688	0.0
356525106	540	PREDICTED: uncharacterized protein LOC10	0.992	0.981	0.678	0.0
147838010	585	hypothetical protein VITISV_036630 [Viti	0.973	0.888	0.687	0.0
356512331	540	PREDICTED: uncharacterized protein LOC10	0.992	0.981	0.674	0.0
356526393	540	PREDICTED: uncharacterized protein LOC10	0.992	0.981	0.674	0.0
224061059	528	predicted protein [Populus trichocarpa]	0.968	0.979	0.636	0.0
449433601	537	PREDICTED: uncharacterized protein LOC10	0.988	0.983	0.637	1e-180
15220725	509	Remorin family protein [Arabidopsis thal	0.908	0.952	0.556	1e-150

>gi|441481999|gb|AGC39094.1| remorin-3 protein [Dimocarpus longan]

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/542 (77%), Positives = 470/542 (86%), Gaps = 10/542 (1%)

Query: 1   MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL-- 58
           M+YERIHK QTGIISPSKLRMKLIGPH NRKK+GSNSNS+RTSP++LDDSEFVRNSLL  
Sbjct: 1   MDYERIHKVQTGIISPSKLRMKLIGPH-NRKKEGSNSNSSRTSPAKLDDSEFVRNSLLAS 59

Query: 59  NGG-FDDE--APSLEVASEKGAGEVVLGHNQG-EQASFQPNETLPRENTEVSRVKMQQFS 114
           NGG FD+E  APSL+VASEK   EVVL +NQG +QAS Q  E +PRE+ +V R KMQ F 
Sbjct: 60  NGGDFDEEVAAPSLDVASEKAGREVVLDNNQGGDQASCQLKEAMPRESADVGRSKMQ-FL 118

Query: 115 KGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDA 174
           K DS N +AIHPMR+ ED+NLDYDSNASSSSFEFHKGERS+ N +ARSFSRPMPSKWNDA
Sbjct: 119 KVDSGNSNAIHPMRVFEDENLDYDSNASSSSFEFHKGERSVHNSIARSFSRPMPSKWNDA 178

Query: 175 EKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFC 234
           EKWIMN+Q  QAN+ KK AL+NQ NRLP TNMVRVVPE+ TYDHKPS  RAADTKRVDFC
Sbjct: 179 EKWIMNKQNAQANHPKKIALYNQTNRLPQTNMVRVVPEHVTYDHKPSMARAADTKRVDFC 238

Query: 235 QTASH-TLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPA 293
           Q  S    EKFSF+P GTHQA+GGNA++D+ TQSKD ++V Q D+ CTK S+E+ SVVPA
Sbjct: 239 QPVSQGAFEKFSFIPPGTHQAYGGNALVDTYTQSKDTKDVGQQDLSCTKISTEDTSVVPA 298

Query: 294 IRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGI 353
           IRSV MRDMGTEMTPVASQEPSRTATPVGATTPLRSP SSIPSTPR  APASTP++ T  
Sbjct: 299 IRSVSMRDMGTEMTPVASQEPSRTATPVGATTPLRSPASSIPSTPRRGAPASTPVDNTTD 358

Query: 354 DESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQ-GKNTSSAEKNS 412
           DESQ PVEN +R L++QE+KEKTRREIVALGVQLGKMNIAAWASK+EQ  KN + + +  
Sbjct: 359 DESQCPVENIRRVLTDQEMKEKTRREIVALGVQLGKMNIAAWASKEEQENKNDNPSAETV 418

Query: 413 DMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQ 472
           DMEELERIEYE RA+AW EAEKSKH ARFKREEIKIQAWESRQKAKLEAEM+RIEAEVEQ
Sbjct: 419 DMEELERIEYENRAAAWEEAEKSKHTARFKREEIKIQAWESRQKAKLEAEMQRIEAEVEQ 478

Query: 473 IRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCG 532
           +RAQAQAKMVKKI+M+RQ+SEEKRAAA+ARK+RDAERTAAQ EYIRQTG++PSSHFTCCG
Sbjct: 479 MRAQAQAKMVKKIAMARQKSEEKRAAADARKNRDAERTAAQAEYIRQTGRMPSSHFTCCG 538

Query: 533 WF 534
           W 
Sbjct: 539 WL 540

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584507|ref|XP_002532982.1| DNA binding protein, putative [Ricinus communis] gi|223527246|gb|EEF29406.1| DNA binding protein, putative [Ricinus communis]

 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/543 (70%), Positives = 444/543 (81%), Gaps = 18/543 (3%)

Query: 1   MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNG 60
           MEYERIHK QTG+ISP+KLRMKL+GPHHNRKKDGSN NS+RTSPSRL+D+EFV+NSLL  
Sbjct: 1   MEYERIHKVQTGMISPTKLRMKLLGPHHNRKKDGSNCNSSRTSPSRLEDTEFVKNSLLAS 60

Query: 61  GFDDE--APSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDS 118
             D+E  APSL+++   GA   V+  +Q +Q S Q  +TL +EN  + R KMQQF+KG+S
Sbjct: 61  N-DEEVAAPSLDLSVPDGA---VVDPSQVDQTSSQLKDTLSKENGNMGRFKMQQFTKGES 116

Query: 119 VNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWI 178
            N SA+HPMR  EDDNLDYDSNASSSSFEFHK ER+  N   RSFSRPMPSKWNDAEKWI
Sbjct: 117 ANSSAVHPMRSLEDDNLDYDSNASSSSFEFHK-ERAAHNQFTRSFSRPMPSKWNDAEKWI 175

Query: 179 MNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTAS 238
           MNRQ ++ N++KKNA++NQANR+P TNMVRV PE   +D K S  R  DTKRVDFCQ AS
Sbjct: 176 MNRQNMRPNFSKKNAVYNQANRMPGTNMVRVAPESVNHDLKLSLSRVVDTKRVDFCQPAS 235

Query: 239 H-TLEKFSFV----PSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPA 293
              LEKFSF+    PS + QA+GGN +ID CTQSKDL EV Q ++  T+SS E+ +V+P 
Sbjct: 236 QMALEKFSFISPGTPSVSGQAYGGNVLIDQCTQSKDLREVDQRELAITRSSVEDTAVLPV 295

Query: 294 IRSVCMRDMGTEMTPVASQEPSRTATPVGATTP--LRSPTSSIPSTPRGRAPASTPMEQT 351
           IRSVCMRDMGTEMTP+ASQEPSRT TPVG+TTP  LRSPTSSIPSTPR  APA TPME  
Sbjct: 296 IRSVCMRDMGTEMTPIASQEPSRTGTPVGSTTPHDLRSPTSSIPSTPRRGAPAPTPMEHG 355

Query: 352 GIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKN 411
             ++++   EN K++L+EQE K KTRREIVALGVQLGKMNIAAWASK++Q KNTSS    
Sbjct: 356 TDEDAESTCENGKKELTEQEFKLKTRREIVALGVQLGKMNIAAWASKEDQDKNTSSV--- 412

Query: 412 SDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVE 471
            D EELERIE+EKRA+AW EAEKSKH AR+KREEIKIQAWES+QKAKLEAEMRRIEA VE
Sbjct: 413 -DAEELERIEFEKRAAAWEEAEKSKHTARYKREEIKIQAWESQQKAKLEAEMRRIEARVE 471

Query: 472 QIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCC 531
           Q+RAQAQAKMVKKI+M+RQ+SEEKRA AEARK+RDAERTAAQ EYIRQTG++PSSH+ CC
Sbjct: 472 QMRAQAQAKMVKKIAMARQKSEEKRATAEARKNRDAERTAAQAEYIRQTGRMPSSHYICC 531

Query: 532 GWF 534
           GW 
Sbjct: 532 GWL 534

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443950|ref|XP_002272255.1| PREDICTED: uncharacterized protein LOC100256651 [Vitis vinifera] gi|297740766|emb|CBI30948.3| unnamed protein product [Vitis vinifera]

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/540 (68%), Positives = 433/540 (80%), Gaps = 20/540 (3%)

Query: 1   MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNG 60
           MEYERIHK QTGIISPSKLRMKL+GPHH RKKDGSNSNS+RTSPS+L+DSEFV+NSLL  
Sbjct: 1   MEYERIHKVQTGIISPSKLRMKLMGPHHQRKKDGSNSNSSRTSPSKLEDSEFVKNSLL-- 58

Query: 61  GFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVN 120
             +DEA SLEV+S K  G+V+    QG+Q S QP E+LPREN  V RVK QQ+SK D+ N
Sbjct: 59  ALEDEASSLEVSSVKLPGDVMPDLAQGDQISCQPKESLPRENGSVGRVKTQQYSKCDTGN 118

Query: 121 LSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMN 180
            S IHP+R  E++NLDYDSNASSSSFEFHK ERS+ N ++RS SRPMPSKWNDAEKWIMN
Sbjct: 119 SSTIHPVRTLEEENLDYDSNASSSSFEFHK-ERSLHNSVSRSLSRPMPSKWNDAEKWIMN 177

Query: 181 RQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHT 240
           RQ  QANY KKN L +Q NRL   NMVRV PE  + DHK S       KRVDFCQ A+  
Sbjct: 178 RQNAQANYTKKNVLQSQGNRLAGANMVRVAPESASTDHKLSV------KRVDFCQPAAQM 231

Query: 241 -LEKFSFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIR 295
            LEKFSFVP+G H    QA+GGNA+ID C Q+KDL+EV   ++ C K S E+ +   AIR
Sbjct: 232 GLEKFSFVPNGAHPISAQANGGNALIDLC-QTKDLKEVDPRELSCLKGSPEDTTGFSAIR 290

Query: 296 SVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPR-GRAPASTPMEQTGID 354
           +V MRDMGTEMTP+ SQ+PSRTATPVGATTPLRSPTSS+PSTPR   APA TP E    D
Sbjct: 291 AVSMRDMGTEMTPIPSQDPSRTATPVGATTPLRSPTSSLPSTPRRAGAPAPTPAEHMTDD 350

Query: 355 ESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDM 414
           ES+   +   R+LSE+E+K KTR+EIVALGVQLGKMNIAAWASKDE+ K+  S E + D+
Sbjct: 351 ESR---DYRNRELSEEELKLKTRKEIVALGVQLGKMNIAAWASKDEKEKSAQSGETH-DL 406

Query: 415 EELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIR 474
           E+ ERIEYE+RA+AW EAEKSKH AR+KREEIKIQAWES+QKAKLEAEMRRIEA+VEQ+R
Sbjct: 407 EDHERIEYERRAAAWEEAEKSKHAARYKREEIKIQAWESQQKAKLEAEMRRIEAQVEQMR 466

Query: 475 AQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 534
           A AQAKMVKKI+M+RQRSEEKRAAAEA ++R+AE+T+AQ EYIRQTG+IP+S F CCGW 
Sbjct: 467 AHAQAKMVKKIAMARQRSEEKRAAAEANRNREAEKTSAQAEYIRQTGRIPTSQFVCCGWL 526

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525106|ref|XP_003531168.1| PREDICTED: uncharacterized protein LOC100805128 [Glycine max]

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/544 (67%), Positives = 434/544 (79%), Gaps = 14/544 (2%)

Query: 1   MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL-- 58
           MEYERI K Q GIISPSKLRMKL+GP H+RKKDGSNSNS+RTSPSR++D+EFV NSLL  
Sbjct: 1   MEYERIEKVQAGIISPSKLRMKLLGPLHHRKKDGSNSNSSRTSPSRIEDAEFV-NSLLGS 59

Query: 59  -NGGFDDE--APSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSK 115
            N   DDE  +PSL+V S K + + VL   Q  Q S++P ET+P+EN++  RVKMQ F K
Sbjct: 60  KNDNLDDEVTSPSLDVLSLKPSSDAVLDRRQNGQISYEPKETMPKENSDTGRVKMQHFQK 119

Query: 116 GDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAE 175
            D+ + SAIH +R  ED+NLDYDSNASSSSFEF KGER   N   RS  RP+PSKWNDAE
Sbjct: 120 VDTGSSSAIHAVRAIEDENLDYDSNASSSSFEFDKGERPGNNPATRSLFRPIPSKWNDAE 179

Query: 176 KWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQ 235
           KWIMNRQ IQAN++KKN  HNQANR+P TNM RV PE G YDHK    +A +TKRVD CQ
Sbjct: 180 KWIMNRQNIQANHSKKNTAHNQANRMP-TNMGRVAPESGNYDHKLPIGKATETKRVDICQ 238

Query: 236 TASHT-LEKFSFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESV 290
             SH   EKFSFVPS  H    QAHG N +++S  QSKDL++V +  + C++S+ +++SV
Sbjct: 239 PTSHMGFEKFSFVPSDAHSVSGQAHGRNPVVESLPQSKDLKDVNELGLCCSRST-DDQSV 297

Query: 291 VPAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQ 350
           +P IRSV MRDMGTEMTPV SQEPSRTATPVG+ TPLRSP SS+PSTPR  APA TP++ 
Sbjct: 298 MPGIRSVAMRDMGTEMTPVPSQEPSRTATPVGSATPLRSPVSSMPSTPRRGAPAPTPLDN 357

Query: 351 TGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEK 410
           T  ++SQ PVEN KR LSE+E+K KTRREI ALGVQLGKMNIAAWASKDEQ KN SS  +
Sbjct: 358 TTNEDSQFPVENGKRHLSEEEMKIKTRREIAALGVQLGKMNIAAWASKDEQEKNKSSP-R 416

Query: 411 NSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEV 470
           +  ++E ERIE+EKRA+ W EAEKSKH ARFKREEIKIQAWES+QKAKLEAEMRRIEA+V
Sbjct: 417 DMSVQEQERIEFEKRAALWEEAEKSKHTARFKREEIKIQAWESQQKAKLEAEMRRIEAKV 476

Query: 471 EQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTC 530
           EQ+RAQ  AKMVKKI+M+RQRSEEKRAAAEARK+R+AERT AQ EYIRQTG++PSS++ C
Sbjct: 477 EQMRAQTHAKMVKKIAMARQRSEEKRAAAEARKNREAERTVAQTEYIRQTGRLPSSNYIC 536

Query: 531 CGWF 534
           CGW 
Sbjct: 537 CGWL 540

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838010|emb|CAN71634.1| hypothetical protein VITISV_036630 [Vitis vinifera]

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/540 (68%), Positives = 432/540 (80%), Gaps = 20/540 (3%)

Query: 1   MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNG 60
           MEYERIHK QTGIISPSKLRMKL+GPHH RKKDGSNSNS+RTSPS+L+DSEFV+NSLL  
Sbjct: 60  MEYERIHKVQTGIISPSKLRMKLMGPHHQRKKDGSNSNSSRTSPSKLEDSEFVKNSLL-- 117

Query: 61  GFDDEAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSKGDSVN 120
             +DEA SLEV+S K  G+V+    QG+Q S QP E+LPREN  V RVK QQ+SK D+ N
Sbjct: 118 ALEDEASSLEVSSVKLPGDVMPDLAQGDQISCQPKESLPRENGSVGRVKTQQYSKCDTGN 177

Query: 121 LSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAEKWIMN 180
            S IHP+R  E++NLDYDSNASSSSFEFHK ERS+ N ++RS SRPMPSKWNDAEKWIMN
Sbjct: 178 SSTIHPVRTLEEENLDYDSNASSSSFEFHK-ERSLHNSVSRSLSRPMPSKWNDAEKWIMN 236

Query: 181 RQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHT 240
           RQ  QANY KKN L +Q NRL   NMVRV PE  + DHK S       KRVDFCQ A+  
Sbjct: 237 RQNAQANYTKKNVLQSQXNRLAGANMVRVAPESASTDHKLSV------KRVDFCQPAAQM 290

Query: 241 -LEKFSFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPAIR 295
            LEKFSFVP+G H    QA+GGNA+ D C Q+KDL+EV   ++ C K S E+ +   AIR
Sbjct: 291 GLEKFSFVPNGAHPISAQANGGNALXDLC-QTKDLKEVDPRELSCLKGSPEDTTGFSAIR 349

Query: 296 SVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPR-GRAPASTPMEQTGID 354
           +V MRDMGTEMTP+ SQ+PSRTATPVGATTPLRSPTSS+PSTPR   APA TP E    D
Sbjct: 350 AVSMRDMGTEMTPIPSQDPSRTATPVGATTPLRSPTSSLPSTPRRAGAPAPTPAEHMTDD 409

Query: 355 ESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDM 414
           ES+   +   R+LSE+E+K KTR+EIVALGVQLGKMNIAAWASKDE+ K+  S E + D+
Sbjct: 410 ESR---DYRNRELSEEELKLKTRKEIVALGVQLGKMNIAAWASKDEKEKSAQSGETH-DL 465

Query: 415 EELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIR 474
           E+ ERIEYE+RA+AW EAEKSKH AR+KREEIKIQAWES+QKAKLEAEMRRIEA+VEQ+R
Sbjct: 466 EDHERIEYERRAAAWEEAEKSKHAARYKREEIKIQAWESQQKAKLEAEMRRIEAQVEQMR 525

Query: 475 AQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCCGWF 534
           A AQAKMVKKI+M+RQRSEEKRAAAEA ++R+AE+T+AQ EYIRQTG+IP+S F CCGW 
Sbjct: 526 AHAQAKMVKKIAMARQRSEEKRAAAEANRNREAEKTSAQAEYIRQTGRIPTSQFVCCGWL 585

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512331|ref|XP_003524873.1| PREDICTED: uncharacterized protein LOC100787239 [Glycine max]

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/544 (67%), Positives = 432/544 (79%), Gaps = 14/544 (2%)

Query: 1   MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL-- 58
           MEYERI K Q GIISPSKLRMKL+GPHH+RKKDGSNSNS+RTSPSR++D+EFV NSLL  
Sbjct: 1   MEYERIEKVQAGIISPSKLRMKLLGPHHHRKKDGSNSNSSRTSPSRIEDAEFV-NSLLDS 59

Query: 59  -NGGFDDE--APSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSK 115
            N   DDE  +PSL+V S K +   +L   Q  Q S++P ET+P+EN ++ R K   F K
Sbjct: 60  KNDNLDDEVTSPSLDVLSLKPSSNALLDRKQNGQISYEPKETMPKENGDMGRAKTHHFPK 119

Query: 116 GDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAE 175
            D+ + SAIH +R  ED+NLDYDSNASSSSFEF KGER   N   RS  RP+PSKWNDAE
Sbjct: 120 VDTGSSSAIHAVRAIEDENLDYDSNASSSSFEFDKGERPGNNPATRSLFRPIPSKWNDAE 179

Query: 176 KWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQ 235
           KWIMNRQ IQAN++KK   HNQANR+P TNM RV PE G  DHK  T +  +TKRVDFCQ
Sbjct: 180 KWIMNRQNIQANHSKKKTAHNQANRMP-TNMGRVAPESGNCDHKLPTGKVTETKRVDFCQ 238

Query: 236 TASHT-LEKFSFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESV 290
             SH   EKFSFVPS  H    QAHG N +++S  QSKDL+EV +  + C++S+ +++SV
Sbjct: 239 PTSHMGFEKFSFVPSDAHSVSGQAHGRNPVVESLPQSKDLKEVNELGLSCSRST-DDQSV 297

Query: 291 VPAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQ 350
            P IRSV MRDMGTEMTPV SQEPSRTATPVG+ TPLRSP SS+PSTPR  APA TP++ 
Sbjct: 298 TPGIRSVAMRDMGTEMTPVPSQEPSRTATPVGSATPLRSPVSSMPSTPRRGAPAPTPLDN 357

Query: 351 TGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEK 410
           T  ++SQ PVEN KR+LSE+E+K KTRREI ALGVQLGKMNIAAWASKDEQ KN SS ++
Sbjct: 358 TTDEDSQFPVENGKRNLSEEEMKIKTRREIAALGVQLGKMNIAAWASKDEQEKNKSSPQE 417

Query: 411 NSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEV 470
            +++ E ERIE+EKRA+ W EAEKSKH ARFKREEIKIQAWES+QKAKLEAEMRRIEA+V
Sbjct: 418 -ANVNEQERIEFEKRAALWEEAEKSKHTARFKREEIKIQAWESQQKAKLEAEMRRIEAKV 476

Query: 471 EQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTC 530
           EQ+RAQ  AKMVKKI+M+RQRSEEKRAAAEARK+R+AERTAAQ EYIRQTG++PSS++ C
Sbjct: 477 EQMRAQTHAKMVKKIAMARQRSEEKRAAAEARKNREAERTAAQTEYIRQTGRLPSSNYIC 536

Query: 531 CGWF 534
           CGW 
Sbjct: 537 CGWL 540

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526393|ref|XP_003531802.1| PREDICTED: uncharacterized protein LOC100790482 [Glycine max]

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/544 (67%), Positives = 429/544 (78%), Gaps = 14/544 (2%)

Query: 1   MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL-- 58
           MEYERI K Q GIISPSKLRMKL+GP H+RKKDGSNSNS+RTSPSR++D+EFV NSLL  
Sbjct: 1   MEYERIEKVQAGIISPSKLRMKLLGPLHHRKKDGSNSNSSRTSPSRIEDAEFV-NSLLGS 59

Query: 59  -NGGFDDE--APSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSK 115
            N   DDE  +PSL+V S K + + VL   Q  Q S++  ET+ +EN+   RVKMQ F K
Sbjct: 60  KNDNLDDEVTSPSLDVLSLKPSSDAVLDRRQNGQISYEAKETMAKENSNTGRVKMQHFQK 119

Query: 116 GDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAE 175
            D+ N SAIH +R  ED+NLDYDSNASSSSFEF KGER   N   RS  RP+PSKWNDAE
Sbjct: 120 VDTGNSSAIHAVRAIEDENLDYDSNASSSSFEFDKGERPGNNPATRSLFRPIPSKWNDAE 179

Query: 176 KWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQ 235
           KWIMNRQ IQAN++KKN  HNQANR+P TNM RV PE G YDHK    +A +TKRVD CQ
Sbjct: 180 KWIMNRQNIQANHSKKNTAHNQANRMP-TNMGRVAPESGNYDHKLPIGKATETKRVDICQ 238

Query: 236 TASHT-LEKFSFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESV 290
           T S+   EKFSFVPS  H    QAHG N +++S  QSKDL++V +  + C++S+ +++SV
Sbjct: 239 TTSYMGFEKFSFVPSDAHSVSGQAHGRNPVVESLPQSKDLKDVNELGLSCSRST-DDQSV 297

Query: 291 VPAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQ 350
           +P IRSV MRDMGTEMTPV SQEPSRTATPVG+ TPLRSP SS+PSTPR  APA TP++ 
Sbjct: 298 MPGIRSVAMRDMGTEMTPVPSQEPSRTATPVGSATPLRSPVSSMPSTPRRGAPAPTPLDN 357

Query: 351 TGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEK 410
           T  ++SQ PVEN KR LSE+E+K KTRREI ALGVQLGKMNIAAWASKDEQ KN SS   
Sbjct: 358 TTNEDSQFPVENGKRHLSEEEMKIKTRREIAALGVQLGKMNIAAWASKDEQEKNKSSPRD 417

Query: 411 NSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEV 470
            S +E+ ERIE+EKRA+ W EAEKSKH ARFKREEIKIQAWES+QKAKLEAEM RIEA+V
Sbjct: 418 VSVLEQ-ERIEFEKRAALWEEAEKSKHTARFKREEIKIQAWESQQKAKLEAEMGRIEAKV 476

Query: 471 EQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTC 530
           EQ+RAQ  AKMVKKI+M+RQR EEK AAAEARK+R+AERTAAQ EYIRQTG++PSS++ C
Sbjct: 477 EQMRAQTHAKMVKKIAMARQRLEEKCAAAEARKNREAERTAAQTEYIRQTGRLPSSNYIC 536

Query: 531 CGWF 534
           CGW 
Sbjct: 537 CGWL 540

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061059|ref|XP_002300338.1| predicted protein [Populus trichocarpa] gi|222847596|gb|EEE85143.1| predicted protein [Populus trichocarpa]

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/545 (63%), Positives = 409/545 (75%), Gaps = 28/545 (5%)

Query: 1   MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNG 60
           M+YERIHK Q+GIISPSKLRMKL+GPHHNRKKDGSNSNS+RTSPS+L D+EFV+NSLL  
Sbjct: 1   MDYERIHKVQSGIISPSKLRMKLVGPHHNRKKDGSNSNSSRTSPSKLQDNEFVKNSLLAS 60

Query: 61  GFDD-----EAPSLEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFSK 115
            F D      A  LEVAS     E VL   Q +     P ET+P+E  +  RVKMQ FSK
Sbjct: 61  DFGDFGEEVAALGLEVASVNFPSEAVLDLCQADL----PMETVPKEIGDAGRVKMQPFSK 116

Query: 116 GDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDAE 175
            +  N SA+HP+R  ED+NLDYDSNASSSSFEFH  ERS+ N  ++ FSRPM SKWNDAE
Sbjct: 117 CEKGNSSAVHPVRTVEDENLDYDSNASSSSFEFH-NERSVNNQFSKRFSRPMSSKWNDAE 175

Query: 176 KWIMNRQIIQANYAKKNA-LHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFC 234
           KWIM RQ +Q NY KKN  LHNQANR P T++ RV P    YD + S  R ADTK +DFC
Sbjct: 176 KWIMKRQNVQPNYVKKNNNLHNQANRNPVTSVDRVAPALSNYDPRSSYSRVADTKLIDFC 235

Query: 235 Q-TASHTLEKFSFVPSGT----HQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENES 289
             +     EKFSF+P G+     Q +G + ++D C QS DL+EV Q ++          S
Sbjct: 236 LPSYQQAFEKFSFIPPGSLTISGQENGVDTLVDRCAQSTDLKEVDQREL----------S 285

Query: 290 VVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPME 349
            VP +RSVCMRDMGTEMTPV S EPSRTATPV ATTPLRSPTSSIPSTP+ RAPA T  +
Sbjct: 286 FVPVVRSVCMRDMGTEMTPVTSLEPSRTATPVDATTPLRSPTSSIPSTPQRRAPAPTTTD 345

Query: 350 QTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAE 409
               D++QH   N K +L+EQE+K KTRREI ALGVQLGKMNIAAWASK++Q K+ SS E
Sbjct: 346 HCSNDDTQHATGNGKIELTEQELKLKTRREIEALGVQLGKMNIAAWASKNDQQKHASSLE 405

Query: 410 KNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAE 469
             ++ME  E+IE+ KRA+AW EAE+SKH AR+KREEIKIQAWES++K KLEAEMRRIEA 
Sbjct: 406 -TTEMEN-EQIEFVKRAAAWEEAEQSKHTARYKREEIKIQAWESQRKVKLEAEMRRIEAR 463

Query: 470 VEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFT 529
           VEQ+RAQA AKMVKKI+M+RQRSEEK  AAEARK++DAERTAAQ EYIRQTG++PSS++ 
Sbjct: 464 VEQMRAQAHAKMVKKIAMTRQRSEEKWVAAEARKNQDAERTAAQAEYIRQTGRMPSSNYI 523

Query: 530 CCGWF 534
           CCGWF
Sbjct: 524 CCGWF 528

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433601|ref|XP_004134586.1| PREDICTED: uncharacterized protein LOC101217408 [Cucumis sativus]

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 346/543 (63%), Positives = 414/543 (76%), Gaps = 15/543 (2%)

Query: 1   MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL-- 58
           MEYERIHK QTGIISPSKLRMKL+GPHH++KKDGSNSNS+RTSPS+L+DSEFVRNSLL  
Sbjct: 1   MEYERIHKVQTGIISPSKLRMKLMGPHHHKKKDGSNSNSSRTSPSKLEDSEFVRNSLLLA 60

Query: 59  --NGGFDDEAPS--LEVASEKGAGEVVLGHNQGEQASFQPNETLPRENTEVSRVKMQQFS 114
             +G F+DE  S  LEV SEK   + V      +++S  P E L +E++E  R +MQQ  
Sbjct: 61  TESGDFEDEVTSSCLEVPSEKVLNQSVSDPKPNDRSSGLPKEFLSKEHSESVRNRMQQCL 120

Query: 115 KGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDA 174
           KGD  N S +HP +  ED+NLDYDSNASSSSFEFHKGERS+ + ++RS  RPMPSKWNDA
Sbjct: 121 KGDGCNSSTVHPSKSVEDENLDYDSNASSSSFEFHKGERSVHSSISRSHLRPMPSKWNDA 180

Query: 175 EKWIMNRQI--IQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVD 232
           EKWI+NRQ     ANY+KKNA      R+ ATNMVRV PE   Y+ + ST RA + K VD
Sbjct: 181 EKWIINRQNNGQAANYSKKNAPPTHGYRMAATNMVRVAPESANYELRSSTGRAVEAKHVD 240

Query: 233 FCQTASHT-LEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVV 291
           F Q+      EKFSFVP G + +   N MIDSC+Q KDL+EV     P +K+S E+ + +
Sbjct: 241 FYQSGLQMGPEKFSFVPVGVYSS-ADNVMIDSCSQIKDLKEVDHK--PSSKASKEDSTGI 297

Query: 292 PAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQT 351
           PAIR+V MRDMGTEMTPV SQEPSRTATPVGA+ PLRSPTSSIPSTPR  APA TP+EQ+
Sbjct: 298 PAIRAVSMRDMGTEMTPVPSQEPSRTATPVGAS-PLRSPTSSIPSTPRRDAPAPTPIEQS 356

Query: 352 GIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKN 411
            I   Q   EN KR+LS  E+K KTRREI+ALG+QLGK NIAAWASKDE  +   +AE N
Sbjct: 357 PIG-LQQLTENGKRELSADEMKLKTRREILALGMQLGKTNIAAWASKDEPERKRHNAE-N 414

Query: 412 SDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVE 471
           +D E  ER E+EKRA+AW E EKSKH AR+KREEIKIQAWE++QK KLEAEMRR+EA+VE
Sbjct: 415 ADKEAFERAEFEKRAAAWEEVEKSKHTARYKREEIKIQAWENQQKTKLEAEMRRVEAQVE 474

Query: 472 QIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHFTCC 531
           Q+RAQA+ KM+KKI+M+RQ+SEEKRAAAE RK ++AER AAQ E IRQTG++PSS + CC
Sbjct: 475 QMRAQAEVKMMKKIAMTRQKSEEKRAAAECRKKQEAERAAAQAEQIRQTGRMPSSPYICC 534

Query: 532 GWF 534
           GW 
Sbjct: 535 GWL 537

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220725|ref|NP_174322.1| Remorin family protein [Arabidopsis thaliana] gi|12322121|gb|AAG51095.1|AC025295_3 hypothetical protein [Arabidopsis thaliana] gi|26452636|dbj|BAC43401.1| unknown protein [Arabidopsis thaliana] gi|29824297|gb|AAP04109.1| unknown protein [Arabidopsis thaliana] gi|332193084|gb|AEE31205.1| Remorin family protein [Arabidopsis thaliana]

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 310/557 (55%), Positives = 394/557 (70%), Gaps = 72/557 (12%)

Query: 1   MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGS--NSNSARTSPSRL---DDSEFVRN 55
           M+YERI K Q  IISP+KLRMKL+GP +N K++GS  NSNS+RTSPSRL   DDSEF +N
Sbjct: 1   MDYERIQKVQKSIISPTKLRMKLMGPLNNMKREGSKSNSNSSRTSPSRLQIPDDSEFSKN 60

Query: 56  SLL--NGGFDDE--APSLEVASEKGAGEVVL----GHNQGEQASFQPNETLPRENTEVSR 107
           SLL  N   DD+  A + ++   K   E VL      NQG +   +    +PREN +   
Sbjct: 61  SLLASNSYSDDDVAATTTDIEVAKLPNEPVLYPTENDNQGSKDRCE--GVVPRENDQP-- 116

Query: 108 VKMQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHK--GERSMQNHMARSF-S 164
            ++QQF KGD +N+++ H MR  ED+NLDYDSNASSSSFEFH+  GERS QNH +R + S
Sbjct: 117 -RLQQFRKGD-LNMASPHIMRPQEDENLDYDSNASSSSFEFHRARGERSNQNHGSRGYPS 174

Query: 165 RPMPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVR 224
           R MPSKWNDAEKWIM+RQ +     +KN    Q NR+P    VR+VP+   Y+H  S   
Sbjct: 175 RQMPSKWNDAEKWIMSRQNM---VMRKNG---QGNRIP----VRIVPDNAGYEHNKS--- 221

Query: 225 AADTKRVDFCQTAS-HTLEKF-SFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDV 278
                R+D CQ++     EKF + VPS  H    Q +GG+++ID  TQS DL +      
Sbjct: 222 -----RMDLCQSSQVDGFEKFPNVVPSAPHPILTQEYGGDSLIDQSTQSNDLAD------ 270

Query: 279 PCTKSSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTP 338
               SS ++ +  PAIRSVCMRDMGTEMTP+ SQEPSR+ TPVGATTPLRSPTSS+PSTP
Sbjct: 271 ----SSHDHTTGGPAIRSVCMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPTSSLPSTP 326

Query: 339 RGRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASK 398
           RG  P  + M +           N++R+LSE+E K KTRREIVALGVQLGKMNIAAWASK
Sbjct: 327 RGGQPEESSMSK-----------NTRRELSEEEEKAKTRREIVALGVQLGKMNIAAWASK 375

Query: 399 DEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAK 458
               +   + + N D EE ++IE+EKRA+AW EAEKSKH AR+KREEI+IQAWES++KAK
Sbjct: 376 ----EEEENKKNNGDAEEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAK 431

Query: 459 LEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIR 518
           LEAEMRRIEA+VEQ++A+A+AK++KKI++++QRSEEKRA AEARK+RDAE+  A+ +YIR
Sbjct: 432 LEAEMRRIEAKVEQMKAEAEAKIMKKIALAKQRSEEKRALAEARKTRDAEKAVAEAQYIR 491

Query: 519 QTGQIPSSHF-TCCGWF 534
           +TG+IP+S +  CCGWF
Sbjct: 492 ETGRIPASSYKICCGWF 508

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	534
TAIR|locus:2204197	509	AT1G30320 "AT1G30320" [Arabido	0.842	0.884	0.414	1.3e-75
TAIR|locus:2051673	486	AT2G02170 "AT2G02170" [Arabido	0.707	0.777	0.371	6.1e-66
TAIR|locus:2008625	347	AT1G67590 "AT1G67590" [Arabido	0.228	0.351	0.354	7.8e-25
TAIR|locus:2197081	442	AT1G53860 "AT1G53860" [Arabido	0.363	0.438	0.252	2.3e-13
TAIR|locus:2050704	190	AT2G45820 "AT2G45820" [Arabido	0.239	0.673	0.303	1.1e-09
TAIR|locus:2115085	427	AT4G36970 "AT4G36970" [Arabido	0.189	0.236	0.303	2.8e-08
TAIR|locus:2101303	175	AT3G48940 "AT3G48940" [Arabido	0.243	0.742	0.264	1.5e-07
UNIPROTKB|P93788	198	P93788 "Remorin" [Solanum tube	0.132	0.358	0.405	3.5e-07
TAIR|locus:2098921	212	AT3G61260 [Arabidopsis thalian	0.342	0.863	0.239	3.9e-07
TAIR|locus:2172793	202	AT5G23750 "AT5G23750" [Arabido	0.239	0.633	0.276	1.7e-06

TAIR|locus:2204197 AT1G30320 "AT1G30320" [Arabidopsis thaliana (taxid:3702)]

 Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
 Identities = 212/511 (41%), Positives = 289/511 (56%)

Query:     1 MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGS--NSNSARTSPSRL---DDSEFVRN 55
             M+YERI K Q  IISP+KLRMKL+GP +N K++GS  NSNS+RTSPSRL   DDSEF +N
Sbjct:     1 MDYERIQKVQKSIISPTKLRMKLMGPLNNMKREGSKSNSNSSRTSPSRLQIPDDSEFSKN 60

Query:    56 SLL--NGGFDDE--APSLEVASEKGAGEVVLGHNQGE-QASFQPNE-TLPRENTEVSRVK 109
             SLL  N   DD+  A + ++   K   E VL   + + Q S    E  +PREN +    +
Sbjct:    61 SLLASNSYSDDDVAATTTDIEVAKLPNEPVLYPTENDNQGSKDRCEGVVPRENDQP---R 117

Query:   110 MQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHK--GERSMQNHMARSF-SRP 166
             +QQF KGD +N+++ H MR  ED+NLDYDSNASSSSFEFH+  GERS QNH +R + SR 
Sbjct:   118 LQQFRKGD-LNMASPHIMRPQEDENLDYDSNASSSSFEFHRARGERSNQNHGSRGYPSRQ 176

Query:   167 MPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAA 226
             MPSKWNDAEKWIM+RQ +     +KN    Q NR+P    VR+VP+   Y+H  S     
Sbjct:   177 MPSKWNDAEKWIMSRQNM---VMRKNG---QGNRIP----VRIVPDNAGYEHNKS----- 221

Query:   227 DTKRVDFCQTAS-HTLEKF-SFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPC 280
                R+D CQ++     EKF + VPS  H    Q +GG+++ID  TQS DL +        
Sbjct:   222 ---RMDLCQSSQVDGFEKFPNVVPSAPHPILTQEYGGDSLIDQSTQSNDLAD-------- 270

Query:   281 TKSSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGAXXXXXXXXXXXXXXXRG 340
               SS ++ +  PAIRSVCMRDMGTEMTP+ SQEPSR+ TPVGA               RG
Sbjct:   271 --SSHDHTTGGPAIRSVCMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPTSSLPSTPRG 328

Query:   341 RAPASTPMEQTGIDESQHPVENSK--RDLSEQEIKEKTRREIVALGV---QLGKMNI--A 393
               P  + M +    E     E +K  R++    + +  +  I A      +  K N   A
Sbjct:   329 GQPEESSMSKNTRRELSEEEEKAKTRREIVALGV-QLGKMNIAAWASKEEEENKKNNGDA 387

Query:   394 AWASKDEQGKNTSSAEKNSDMEELERIEYEK-RASAWAEAEKSKHIARFKREEIKIQAWE 452
               A K E  K  ++ E+    +   R + E+ R  AW   EK+K  A  +R E K++  +
Sbjct:   388 EEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAKLEAEMRRIEAKVEQMK 447

Query:   453 SRQKAKLEAEMRRIEAEVEQIRAQAQAKMVK 483
             +  +AK+  ++   +   E+ RA A+A+  +
Sbjct:   448 AEAEAKIMKKIALAKQRSEEKRALAEARKTR 478

GO:0003677 "DNA binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2051673 AT2G02170 "AT2G02170" [Arabidopsis thaliana (taxid:3702)]

 Score = 609 (219.4 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
 Identities = 150/404 (37%), Positives = 216/404 (53%)

Query:   133 DNLDYDSNASSSS-FEFHKGERSMQNHMA--RSFSRPMPSKWNDAEKWIMNRQIIQANYA 189
             DN++   + S+SS FEF K E+   N     RSFS+P PSKW+DA+KWI +     AN  
Sbjct:    98 DNVNEIKSVSASSVFEFQKTEKEKVNQRMPIRSFSKPAPSKWDDAQKWIASPT---ANRP 154

Query:   190 KKNALHNQANRL-PATNMVRVVPEYGTYDHKPSTVRAADTKRVDFCQTASHTLEKFSFVP 248
             K   +    ++  P+      +      +H+   V   DTKR+D  Q       KF    
Sbjct:   155 KTGQVQVPGSKKGPSFGRQSSMKIVEVAEHR--VVEEPDTKRIDVSQVKKDMGNKFGSWE 212

Query:   249 SGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVP--AIRSVCMRDMGTEM 306
               ++             ++  +E   + ++    SS       P    RSV MRDMGTEM
Sbjct:   213 VDSYTTVDSYVKPVLMVENSIVESATEVNLSRHDSSVATAFAQPPSTARSVSMRDMGTEM 272

Query:   307 TPVASQEPSRTATPVGAXXXXXXXXXXXXXXXRGRAPASTPMEQTGIDESQHPVENSKRD 366
             TP+ASQEPSR  TP+ A                 R+P S+     G   S  P+ N  ++
Sbjct:   273 TPIASQEPSRNGTPIRATTPI-------------RSPISSEPSSPGRQASASPMSN--KE 317

Query:   367 LSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRA 426
             LSE+E++ KTRREI+ LG QLGK NIAAWASK+++ K+ S++ K     +  +   E RA
Sbjct:   318 LSEKELQMKTRREIMVLGTQLGKFNIAAWASKEDEDKDASTSLKTKASLQTSKSVSEARA 377

Query:   427 SAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKIS 486
             +AW EAEK+KH+ARF+REE+KIQAWE+ QKAK EAEM++ E +VE+I+ +AQ +++KK++
Sbjct:   378 TAWEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEMKKTEVKVERIKGRAQDRLMKKLA 437

Query:   487 MSRQXXXXXXXXXXXXXXXXXXXTAAQGEYIRQTGQIPSSHFTC 530
                +                   T  Q E IR+TG++PS  F+C
Sbjct:   438 TIERKAEEKRAAAEAKKDHQAAKTEKQAEQIRRTGKVPSLLFSC 481

GO:0003677 "DNA binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2008625 AT1G67590 "AT1G67590" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 7.8e-25, Sum P(2) = 7.8e-25
 Identities = 44/124 (35%), Positives = 79/124 (63%)

Query:   405 TSSAEK-NSDMEELERIE-YEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAE 462
             ++++EK N  +E  + +   E RA AW EAE++K +AR+KREE+KIQAWE+ +K K E E
Sbjct:   210 SNNSEKVNGFVESKKAMSAMEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEME 269

Query:   463 MRRIEAEVEQIRAQAQAKMVKKISMSRQXXXXXXXXXXXXXXXXXXXTAAQGEYIRQTGQ 522
             M+++E + E+++A+A+ K+  K++ +++                   T+ + +YIR++G 
Sbjct:   270 MKKMEVKAERMKARAEEKLANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRSGH 329

Query:   523 IPSS 526
             +PSS
Sbjct:   330 LPSS 333

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2197081 AT1G53860 "AT1G53860" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
 Identities = 54/214 (25%), Positives = 105/214 (49%)

Query:   282 KSSSENESVVPAIRSVCMRD----MGTEMTPVASQEPSRTATPVGAXXXXXXXXXXXXXX 337
             K ++E   ++P+      +D    +  E   V  ++     TP+G+              
Sbjct:   187 KLANEVPQILPSTEGFIFKDSDKFLRYEEAQVQHRDMGTEMTPIGSVTTSRCHTPF---- 242

Query:   338 XRGRAPA--STPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAW 395
              +  +PA  +TP + +G      P+  +K  +   E ++K R    +       +  + W
Sbjct:   243 -KSSSPARHNTPSQLSG------PLTETKNVIDISEFEDKLRLSGSSTSQYCYSVT-SHW 294

Query:   396 ASKDEQGKNTSSAEKNSDME-ELERIEYEKRASAWA-EAEKSKHIARFKREEIKIQAWES 453
              S++E+ +  S + ++ DME EL R   E +A  W  E +K K   R++REE KIQAW +
Sbjct:   295 NSREEEEEEISKSLRHFDMESELRRSVSESKAPLWDDEDDKIKFCQRYQREEAKIQAWVN 354

Query:   454 RQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISM 487
              + AK EA+ R++E +++++R+  + K++K++ M
Sbjct:   355 LENAKAEAQSRKLEVKIQKMRSNLEEKLMKRMDM 388

GO:0003677 "DNA binding" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2050704 AT2G45820 "AT2G45820" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 41/135 (30%), Positives = 65/135 (48%)

Query:   403 KNTSSAEKNSDMEELERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKL 459
             K  SS   + D+  L  +E EK+ S   AW E+EKSK   R +++   + AWE+ +KA +
Sbjct:    60 KKASSGSADRDVI-LADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAV 118

Query:   460 EAEMRRIEAEVEQIRAQAQAKMVKKISMSRQXXXXXXXXXXXXXXXXXXXTAAQGEYIRQ 519
             EA++R+IE ++E+ +AQ   KM  K++   +                       G   R 
Sbjct:   119 EAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRA 178

Query:   520 TGQIPSSHFTCCGWF 534
             TG +P +    CG F
Sbjct:   179 TGVVPKA---TCGCF 190

GO:0003677 "DNA binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2115085 AT4G36970 "AT4G36970" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
 Identities = 31/102 (30%), Positives = 59/102 (57%)

Query:   389 KMNIAAWASKDEQGKNTSSAEKNSDMEELE-RIEYEKRASAWAEAEKSKHIARFKREEIK 447
             KM+  A   K  + +  SS     +  E+E   E    +S+W  +E +  +++ +REE K
Sbjct:   265 KMDKGARMIKRPKRRVMSSRIIRREQPEVEDNSEASASSSSWDISEPAMTLSKLQREEAK 324

Query:   448 IQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSR 489
             I AWE+ QKAK EA +R++E ++E+ ++ +  K++ K+  ++
Sbjct:   325 IAAWENLQKAKAEAAIRKLEVKLEKKKSASMDKILNKLQTAK 366

GO:0003677 "DNA binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2101303 AT3G48940 "AT3G48940" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 36/136 (26%), Positives = 62/136 (45%)

Query:   396 ASKDEQGKNTSSAEKNSDMEELERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWE 452
             A +  + K   S  +++    L R+E +KR S   AW EAEKSK   + +++   + AWE
Sbjct:    40 AKEPTEDKKVGSVHRDA---VLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWE 96

Query:   453 SRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQXXXXXXXXXXXXXXXXXXXTAA 512
             + +KA +EAE+++IE ++ + +A    +M  KI+   +                      
Sbjct:    97 NSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEE 156

Query:   513 QGEYIRQTGQIPSSHF 528
                  R TG  P+  F
Sbjct:   157 MAAKYRATGTAPTKLF 172

GO:0003677 "DNA binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0048765 "root hair cell differentiation" evidence=RCA

UNIPROTKB|P93788 P93788 "Remorin" [Solanum tuberosum (taxid:4113)]

 Score = 136 (52.9 bits), Expect = 3.5e-07, P = 3.5e-07
 Identities = 30/74 (40%), Positives = 49/74 (66%)

Query:   417 LERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQI 473
             L R+  EKR S   AW E+EKSK   + +++   I AWE+ +KA LEAE++++E ++E+ 
Sbjct:    81 LARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKK 140

Query:   474 RAQAQAKMVKKISM 487
             +A+   KM  KI++
Sbjct:   141 KAEYTEKMKNKIAL 154

GO:0005886 "plasma membrane" evidence=IDA

GO:0007267 "cell-cell signaling" evidence=NAS

GO:0048032 "galacturonate binding" evidence=IDA

TAIR|locus:2098921 AT3G61260 [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 47/196 (23%), Positives = 91/196 (46%)

Query:   343 PASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQG 402
             PA  P E      +  P + +K D++E++I+     +I      L    +     ++   
Sbjct:    26 PAPAPAEIPAPAPAPTPADVTK-DVAEEKIQNPPPEQIFDDSKAL---TVVEKPVEEPAP 81

Query:   403 KNTSSAEKNSDMEELERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQKAKL 459
                +SA  + D++ L  +  EKR S   AW E+EKSK   + +++   + AWE+ +KA +
Sbjct:    82 AKPASASLDRDVK-LADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAV 140

Query:   460 EAEMRRIEAEVEQIRAQAQAKMVKKIS-MSRQXXXXXXXXXXXXXXXXXXXTAAQGEYIR 518
             EA++++IE ++E+ +A+   +M  K++ + ++                        +Y R
Sbjct:   141 EAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKY-R 199

Query:   519 QTGQIPSSHFTCCGWF 534
              TG +P +    CG F
Sbjct:   200 ATGIVPKA---TCGCF 212

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2172793 AT5G23750 "AT5G23750" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 37/134 (27%), Positives = 62/134 (46%)

Query:   400 EQGKNTSSAEKNSDMEELERIEYEKRAS---AWAEAEKSKHIARFKREEIKIQAWESRQK 456
             E+ K   S  +++    L R+E EKR S   AW EAEK K   + +++   I +WE+ +K
Sbjct:    71 EEEKKEGSVNRDA---VLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKK 127

Query:   457 AKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQXXXXXXXXXXXXXXXXXXXTAAQGEY 516
             A +EAE++++E ++E+ +A+   +M  KI+   +                          
Sbjct:   128 AAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAK 187

Query:   517 IRQTGQIPSSHFTC 530
              R TG  P   F C
Sbjct:   188 YRATGTAPKKLFGC 201

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0042546 "cell wall biogenesis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	534
pfam03763	112	pfam03763, Remorin_C, Remorin, C-terminal region	2e-30
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-04
COG3064	387	COG3064, TolA, Membrane protein involved in colici	2e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	3e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	3e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	3e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	4e-04
PRK09510	387	PRK09510, tolA, cell envelope integrity inner memb	0.001
COG2268	548	COG2268, COG2268, Uncharacterized protein conserve	0.002
PRK11448	1123	PRK11448, hsdR, type I restriction enzyme EcoKI su	0.003

>gnl|CDD|190741 pfam03763, Remorin_C, Remorin, C-terminal region

 Score =  114 bits (287), Expect = 2e-30
 Identities = 47/111 (42%), Positives = 78/111 (70%)

Query: 418 ERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQA 477
           ++ E E RA AW EAEK+K   +++REE KIQAWE+++KAK EAE+++IE ++E+ +A+A
Sbjct: 2   KKSEAESRADAWEEAEKAKINNKYQREEAKIQAWENKKKAKAEAELKKIERKLEKKKAEA 61

Query: 478 QAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQTGQIPSSHF 528
             K+  K++ + +++EEKRA AEA++  +  +   +   IR TG++PS   
Sbjct: 62  AEKLKNKLAAAHKKAEEKRATAEAKRGEEEAKAEEKAAKIRATGKLPSKLS 112

Remorins are plant-specific plasma membrane-associated proteins. In tobacco remorin co-purifies with lipid rafts. Most remorins have a variable, proline-rich C-half and a more conserved N-half that is predicted to form coiled coils. Consistent with this, circular dichroism studies have demonstrated that much of the protein is alpha-helical. Remorins exist in plasma membrane preparations as oligomeric structures and form filaments in vitro. The proteins can bind polyanions including the extracellular matrix component oligogalacturonic acid (OGA). In vitro, remorin in plasma membrane preparations is phosphorylated (principally on threonine residues) in the presence of OGA and thus co-purifies with a protein kinases(s). The biological functions of remorins are unknown but roles as components of the membrane/cytoskeleton are possible. Length = 112

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 44.0 bits (103), Expect = 2e-04
 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 9/168 (5%)

Query: 355  ESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDM 414
            E+    E +K+D  E +  E+ R        +  +M   A      + +    A++    
Sbjct: 1227 EAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKA 1286

Query: 415  EELERIEYEKRASAWAEAEKSKHIARFKR--EEIKIQAWESRQKA---KLEAEMRRIEAE 469
            EE ++ +  K+A    +A+++K  A   +  +E K +A E+++KA   K +AE  +  AE
Sbjct: 1287 EEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAE 1346

Query: 470  VEQIRAQAQAKMVK----KISMSRQRSEEKRAAAEARKSRDAERTAAQ 513
              +  A+A A   +    K   + ++ EE +  A+A K +  E+  A 
Sbjct: 1347 AAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAD 1394

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 44.0 bits (103), Expect = 2e-04
 Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 5/164 (3%)

Query: 349  EQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSA 408
            E+   DE++   E +K+    ++  E+ +++  A   +  +   AA A+K E       A
Sbjct: 1300 EKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEA 1359

Query: 409  EKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEA 468
            E   +  E    + E+ A   A+A K K   + K +E K +A E ++KA    E+++  A
Sbjct: 1360 EAAEEKAEAAEKKKEE-AKKKADAAKKKAEEKKKADEAKKKAEEDKKKAD---ELKKAAA 1415

Query: 469  EVEQI-RAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTA 511
              ++   A+ +A+  KK   +++++EE + A EA+K  +  + A
Sbjct: 1416 AKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA 1459

Length = 2084

>gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane]

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 2/155 (1%)

Query: 361 ENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERI 420
           E   +  +EQE  ++  +E +    Q  +   A   ++ EQ +    A K +   E ++ 
Sbjct: 91  ELKPKQAAEQERLKQLEKERLKAQEQQKQAEEAEKQAQLEQKQQEEQARKAA--AEQKKK 148

Query: 421 EYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAK 480
               +A A AEA K K  A  K++  +        KAK EA   + +AE E   A  +AK
Sbjct: 149 AEAAKAKAAAEAAKLKAAAEAKKKAEEAAKAAEEAKAKAEAAAAKKKAEAEAKAAAEKAK 208

Query: 481 MVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGE 515
              +     ++  E  A  +A   +      A+ +
Sbjct: 209 AEAEAKAKAEKKAEAAAEEKAAAEKKKAAAKAKAD 243

Length = 387

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 43.6 bits (102), Expect = 3e-04
 Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 4/165 (2%)

Query: 349  EQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSA 408
            E+   DE++   E  K D ++++ +E  + +      +  K    A   K E+ K  + A
Sbjct: 1288 EKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEA 1347

Query: 409  EKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEA 468
             K     E    E E        AEK K  A+ K +  K +A E ++  + + +    + 
Sbjct: 1348 AKAE--AEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKK 1405

Query: 469  EVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQ 513
            + ++++  A AK  KK   +++++EEK+ A EA+K  +  + A +
Sbjct: 1406 KADELKKAAAAK--KKADEAKKKAEEKKKADEAKKKAEEAKKADE 1448

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 43.6 bits (102), Expect = 3e-04
 Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 8/125 (6%)

Query: 396  ASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQ 455
            A K E+ KN +   K  + ++ E    E+    + E +K K     K EE KI+A E ++
Sbjct: 1569 AKKAEEDKNMA-LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKK 1627

Query: 456  ----KAKLEAEMRRIEAEV---EQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAE 508
                K K+E   ++   E    E+++   +   +K    +++  E+K+ A EA+K+ + E
Sbjct: 1628 AEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687

Query: 509  RTAAQ 513
            + AA+
Sbjct: 1688 KKAAE 1692

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 43.2 bits (101), Expect = 3e-04
 Identities = 37/182 (20%), Positives = 80/182 (43%), Gaps = 11/182 (6%)

Query: 341  RAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRR---------EIVALGVQLGKMN 391
            +A  +   E+  I+E     E  K+  +E+  K +  +         E     V+  K  
Sbjct: 1582 KAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKK 1641

Query: 392  IAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAW 451
             A    K E+ K      K    EE ++ E +K+ +   EA+K++   +   E +K +A 
Sbjct: 1642 EAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAE--EAKKAEEDEKKAAEALKKEAE 1699

Query: 452  ESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTA 511
            E+++  +L+ +    + + E+++   +   +K     ++  E+K+ A EA+K  + ++  
Sbjct: 1700 EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKI 1759

Query: 512  AQ 513
            A 
Sbjct: 1760 AH 1761

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 43.2 bits (101), Expect = 4e-04
 Identities = 35/168 (20%), Positives = 76/168 (45%), Gaps = 7/168 (4%)

Query: 355  ESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDM 414
            E     E +++    ++ +   + E V    +L K   A  A    + +    AE+    
Sbjct: 1161 EDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKA 1220

Query: 415  EELERIE-------YEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIE 467
            E+ ++ E        +K A    +AE+ ++    ++ E    A  +R++A ++AE  R  
Sbjct: 1221 EDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKA 1280

Query: 468  AEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGE 515
             E+++   + +A   KK    ++  E K+ A EA+K+ +A++ A + +
Sbjct: 1281 DELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAK 1328

Length = 2084

>gnl|CDD|236545 PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 15/132 (11%)

Query: 395 WASKDEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIA--RFKREEIKIQAWE 452
           +  + +Q K+   AE+    +E ++ E E +    AE E+ K +   R   +E K QA E
Sbjct: 64  YNRQQQQQKSAKRAEEQRKKKEQQQAE-ELQQKQAAEQERLKQLEKERLAAQEQKKQAEE 122

Query: 453 SRQKAKLE-----------AEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSE-EKRAAAE 500
           + ++A L+           A   + +AE E  RA A AK     +  +  +E  K+AAAE
Sbjct: 123 AAKQAALKQKQAEEAAAKAAAAAKAKAEAEAKRAAAAAKKAAAEAKKKAEAEAAKKAAAE 182

Query: 501 ARKSRDAERTAA 512
           A+K  +AE  A 
Sbjct: 183 AKKKAEAEAAAK 194

Length = 387

>gnl|CDD|225177 COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 33/176 (18%), Positives = 67/176 (38%), Gaps = 22/176 (12%)

Query: 353 IDESQHPVENSKRDLSEQE---IKEKTRREIVALGVQLGKMNIAAWASK-DEQGKNTSSA 408
            +++Q   E       E     +    R++   L  Q     I A   +  E+ K  ++ 
Sbjct: 302 EEKAQAEQEVQHAKALEAREMRVGLIERQKETELEPQERSYFINAAQRQAQEEAKAAANI 361

Query: 409 EKNSDMEELERIEYEKRASAWAEAEKSKHI-----ARFKREEIKIQAWESRQKAKLEAEM 463
            +    +    +E  +       AE++  +     A  ++ EI ++A  ++ +A+ +A  
Sbjct: 362 AEAIGAQAEAAVETARETEEAERAEQAALVAAAEAAEQEQVEIAVRAEAAKAEAEAQAAE 421

Query: 464 RRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQ 519
            + EAE  + + +A+A             E KRA AEA +       A   + + Q
Sbjct: 422 IKAEAEAIREKGKAEA-------------EAKRALAEAIQVLGDAAAAELFKALVQ 464

Length = 548

>gnl|CDD|236912 PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional

 Score = 40.3 bits (95), Expect = 0.003
 Identities = 18/100 (18%), Positives = 48/100 (48%), Gaps = 11/100 (11%)

Query: 406 SSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRR 465
                ++  +E+  ++ +    A    EK++  A  + ++ ++ A E    A+LE + + 
Sbjct: 140 PENLLHALQQEVLTLKQQLELQA---REKAQSQALAEAQQQELVALE-GLAAELEEKQQE 195

Query: 466 IEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSR 505
           +EA++EQ++ +A          S++R ++++   +    R
Sbjct: 196 LEAQLEQLQEKAAET-------SQERKQKRKEITDQAAKR 228

Length = 1123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	534
PF03763	111	Remorin_C: Remorin, C-terminal region ; InterPro:	100.0
PF03763	111	Remorin_C: Remorin, C-terminal region ; InterPro:	96.58
PRK09174	204	F0F1 ATP synthase subunit B'; Validated	82.81

>PF03763 Remorin_C: Remorin, C-terminal region ; InterPro: IPR005516 Remorin binds both simple and complex galaturonides

Probab=100.00  E-value=6e-35  Score=258.27  Aligned_cols=110  Identities=51%  Similarity=0.742  Sum_probs=107.3

Q ss_pred             HHHHHHhhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009448          419 RIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAA  498 (534)
Q Consensus       419 k~~~EarAaAWEeAEkAK~~~RyqREEaKI~AWEN~QKAKAEA~mrKiE~KLEKkRA~a~EKm~NKlA~a~rkAEEkRA~  498 (534)
                      +..++++++|||++|++|+++||+|++++|++|||+||+|||++|+|+|++||+||+.++|||+|+|+.||++||++|++
T Consensus         2 ~~~~~a~a~aWe~ae~aK~~~r~~ree~~I~aWEn~qkaKaea~m~k~E~klEkkra~a~ek~~nkia~~~~~Aee~Ra~   81 (111)
T PF03763_consen    2 KEEVEAKADAWEEAEKAKINNRYEREEAKIQAWENLQKAKAEAEMRKIEEKLEKKRAKALEKMKNKIARAHKKAEEKRAA   81 (111)
T ss_pred             cHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhHHHHHHHHHHHHhhcCCCCCCCC
Q 009448          499 AEARKSRDAERTAAQGEYIRQTGQIPSSHF  528 (534)
Q Consensus       499 AEA~r~ee~~Ka~EkA~kiR~TGk~Pss~f  528 (534)
                      ++++|++++++++++|++||+||++|++||
T Consensus        82 aea~r~~~~~k~~ekA~~~R~tG~~P~~~f  111 (111)
T PF03763_consen   82 AEARRGEEIAKAEEKAAKIRATGKVPSKCF  111 (111)
T ss_pred             HHHHHhhHHHhHHHHHHHHHhCCCCCcccC
Confidence            999999999999999999999999999765

The N-terminal region of remorin is proline rich, while the C-terminal region has been predicted to form a coiled-coil, that is expected to interact with other macromolecules, most likely DNA. Functional similarities between the behavior of the proteins and viral proteins involved in intercellular communication have been noted [].

>PF03763 Remorin_C: Remorin, C-terminal region ; InterPro: IPR005516 Remorin binds both simple and complex galaturonides

Probab=96.58  E-value=0.041  Score=49.70  Aligned_cols=79  Identities=27%  Similarity=0.352  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Q 009448          442 KREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQT  520 (534)
Q Consensus       442 qREEaKI~AWEN~QKAKAEA~mrKiE~KLEKkRA~a~EKm~NKlA~a~rkAEEkRA~AEA~r~ee~~Ka~EkA~kiR~T  520 (534)
                      +..+++|.+||..+++|+....++.|.++.-==..--.|..-+|..+..+.|.+|+.+.++-.+.+..+..+|.-.|..
T Consensus         3 ~~~~a~a~aWe~ae~aK~~~r~~ree~~I~aWEn~qkaKaea~m~k~E~klEkkra~a~ek~~nkia~~~~~Aee~Ra~   81 (111)
T PF03763_consen    3 EEVEAKADAWEEAEKAKINNRYEREEAKIQAWENLQKAKAEAEMRKIEEKLEKKRAKALEKMKNKIARAHKKAEEKRAA   81 (111)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3468999999999999999999999977642222222233445566778889999999999999999888888877764

The N-terminal region of remorin is proline rich, while the C-terminal region has been predicted to form a coiled-coil, that is expected to interact with other macromolecules, most likely DNA. Functional similarities between the behavior of the proteins and viral proteins involved in intercellular communication have been noted [].

>PRK09174 F0F1 ATP synthase subunit B'; Validated

Probab=82.81  E-value=31  Score=34.17  Aligned_cols=44  Identities=34%  Similarity=0.291  Sum_probs=23.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 009448          468 AEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTA  511 (534)
Q Consensus       468 ~KLEKkRA~a~EKm~NKlA~a~rkAEEkRA~AEA~r~ee~~Ka~  511 (534)
                      ...+..+..+.+.+...++.++...+..|..+...-...+..++
T Consensus       134 ~~~e~~~~~a~~ea~~~l~~Ae~~I~~ek~~A~~el~~~a~e~A  177 (204)
T PRK09174        134 AKAEAERAAIEASLEKKLKEAEARIAAIKAKAMADVGSIAEETA  177 (204)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444555555555555555555555555555555444444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	534
2zuo_A	861	MVP, major vault protein; repeat domains, protein-	1e-08
2zuo_A	861	MVP, major vault protein; repeat domains, protein-	2e-04
2zuo_A	861	MVP, major vault protein; repeat domains, protein-	2e-04
2zuo_A	861	MVP, major vault protein; repeat domains, protein-	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	9e-04

>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861

 Score = 56.7 bits (136), Expect = 1e-08
 Identities = 26/170 (15%), Positives = 65/170 (38%), Gaps = 1/170 (0%)

Query: 346 TPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNT 405
           + ++   ++       ++ +   +  I+  T  +  A   +  ++   A   + E+ K  
Sbjct: 636 SSVDVQSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEA-RGRLERQKIL 694

Query: 406 SSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRR 465
             +E     +EL  +E    A       K++  +R +   I+ +    + K K +A    
Sbjct: 695 DQSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIE 754

Query: 466 IEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGE 515
            EAE+E+++   + +++   +       + +  A     +  E T A G 
Sbjct: 755 TEAELERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGP 804

>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861

 Score = 43.3 bits (101), Expect = 2e-04
 Identities = 24/185 (12%), Positives = 55/185 (29%), Gaps = 10/185 (5%)

Query: 342 APASTPMEQ---TGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASK 398
           A AS   +          +  V   +             +           + ++   S 
Sbjct: 582 AVASVTFDDFHKNSARIIRMAVFGFEMSEDTGPDGTLLPKARDQAVFPQNGLVVS---SV 638

Query: 399 DEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAK 458
           D Q            ++   ++  E        ++++      +R E + +    RQK  
Sbjct: 639 DVQSVEPVDQRTRDALQRSVQLAIEITT----NSQEAAAKHEAQRLEQEARGRLERQKIL 694

Query: 459 LEAEMRRIEAEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIR 518
            ++E  +   E+ ++ A + A      + +   S  + A  E   S    +  AQ   I 
Sbjct: 695 DQSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIE 754

Query: 519 QTGQI 523
              ++
Sbjct: 755 TEAEL 759

>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861

 Score = 43.3 bits (101), Expect = 2e-04
 Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 5/156 (3%)

Query: 369 EQEIKEKTRREIVALGVQLGKMNIAAWASKDEQGKNTSSAEKNSDMEELERIEYEKRASA 428
            Q     +  ++ ++     +   A   S     + T+++++ +   E +R+E E R   
Sbjct: 629 PQNGLVVSSVDVQSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRL 688

Query: 429 -----WAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIEAEVEQIRAQAQAKMVK 483
                  ++E  K        E    A ES   AK EAE R   A +E   +  QAK+  
Sbjct: 689 ERQKILDQSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKA 748

Query: 484 KISMSRQRSEEKRAAAEARKSRDAERTAAQGEYIRQ 519
           +       +E +R            R   + E  + 
Sbjct: 749 QALAIETEAELERVKKVREMELIYARAQLELEVSKA 784

>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861

 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 35/192 (18%), Positives = 60/192 (31%), Gaps = 12/192 (6%)

Query: 339 RGRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASK 398
           +   P             Q  +E +          E  R E  A G +L +  I   +  
Sbjct: 641 QSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARG-RLERQKILDQSEA 699

Query: 399 DEQGKNTSSAEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWE------ 452
           ++  K     E  S   E      +  A + AEA + +      + ++K QA        
Sbjct: 700 EKARKELLELEAMSMAVESTGNA-KAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAE 758

Query: 453 -SRQKAKLEAEMRRI--EAEVEQIRAQAQAKM-VKKISMSRQRSEEKRAAAEARKSRDAE 508
             R K   E E+     + E+E  +AQ  A +  KK     +          A    + +
Sbjct: 759 LERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGPGTIRDLAVAGPEMQ 818

Query: 509 RTAAQGEYIRQT 520
               Q   ++ T
Sbjct: 819 VKLLQSLGLKST 830

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 2e-04
 Identities = 66/482 (13%), Positives = 124/482 (25%), Gaps = 164/482 (34%)

Query: 3   YERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGF 62
              I   Q     PS +  ++     +R  + +   +      RL     +R +LL    
Sbjct: 95  MSPIKTEQ---RQPS-MMTRMYIEQRDRLYNDNQVFAKYNVS-RLQPYLKLRQALLE--- 146

Query: 63  DDEAPSLEVASEKGAGEVVLG----HNQGEQASFQPNE----TLPRENTEVSRVKMQQFS 114
              A ++ +    G+G+  +      +   Q      +     L   N+  + ++M Q  
Sbjct: 147 LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM-DFKIFWLNLKNCNSPETVLEMLQ-- 203

Query: 115 KGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARS-FSRPMPSKWND 173
                               L Y               +   N  +RS  S  +  + + 
Sbjct: 204 -------------------KLLY---------------QIDPNWTSRSDHSSNIKLRIHS 229

Query: 174 AEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDF 233
            +  +  R +    Y  +N L      L       V+       +    V+  + K    
Sbjct: 230 IQAEL-RRLLKSKPY--ENCL------L-------VL------LN----VQ--NAK---- 257

Query: 234 CQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPA 293
                     F+                 SC        ++ T    T+     + +  A
Sbjct: 258 ------AWNAFNL----------------SCK-------ILLT----TRFKQVTDFLSAA 284

Query: 294 IRS-VCMRDMGTEMTPVASQE-------------PSRTATPVGATTPLRSPTSSIPSTPR 339
             + + +      +TP   +              P    T    T P R   S I  + R
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT----TNPRR--LSIIAESIR 338

Query: 340 GRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAA----- 394
                    +    D+    +E+S   L   E     R+    L V     +I       
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEY----RKMFDRLSVFPPSAHIPTILLSL 394

Query: 395 -WASKDEQG--------KNTSSAEKNSDME--ELERIEYEKRASAWAEAEKSKH---IAR 440
            W    +             S  EK        +  I  E +     E E + H   +  
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK--LENEYALHRSIVDH 452

Query: 441 FK 442
           + 
Sbjct: 453 YN 454

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 39.8 bits (92), Expect = 9e-04
 Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 23/101 (22%)

Query: 408 AEKNSDMEELERIEYEKRASAWAEAEKSKHIARFKREEIKIQAWESRQKAKLEAEMRRIE 467
           A+ +   +E E I        W E E+ K +   + +           + +   + ++  
Sbjct: 75  AQADRLTQEPESIR------KWRE-EQRKRLQ--ELDAA-----SKVMEQEWREKAKK-- 118

Query: 468 AEVEQIRAQAQAKMVKKISMSRQRSEEKRAAAEARKSRDAE 508
            ++E+   +   ++ K    +R       A     +  DA+
Sbjct: 119 -DLEEWNQRQSEQVEKNKINNRI------ADKAFYQQPDAD 152

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00