Citrus Sinensis ID: 009474

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530----
MKMQMNSATAPCPPSSCSTSSTFPPPPRFTSVSRNSKSPLALPRAVCTSQRMYRSAGVPNEAYLSSNTSTNYVVSRYSFGWSETQPILPKQSVNKDLSPLAALVTSKSQNFSTASLVGDEKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDSKRNELPPPVTVWEWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWGILPLFQ
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccccHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHHcccccccccccHHHHccccccccHHHHHHHcccccccccccccccccccccccHHcHHHHHHHHHHHHHHHHHHHccccHHHcccccccc
cccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccEEcEccccccccEEEEEcccccccccccccccccccccccHHccccccccccccccccccccEEEEEEEccccccHHHHHHHHHHHHcccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcHHHccEEEEEEEccccccHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHHHHccccccccEEEEEEcccccHHHHHHcccccHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccEcccEHHHHHHHHHHcccccEEEEccccccccHHHHcHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccccc
mkmqmnsatapcppsscstsstfpppprftsvsrnsksplalpravctsqrmyrsagvpneaylssntstnyvvsrysfgwsetqpilpkqsvnkdlspLAALVtsksqnfstaslvgdeKIGVLLLnlggpetledVQPFLfnlfadpdiirlpRLFRFLQKPLAQFISVvrapkskegyasigggsplrrITDAQAEELRKSLWeknlpakvyvgmrywhpfTEEAIEQIKRDgitklvvlplypqfsistsgssLRLLESIFREDEYLVnmqhtvipswyqrEGYITAMANLIEKElqnfdspeqVMIFFSAHGvplayveeagdpykAEMEECVDLIMEELEKRKITNAYTLAYqsrvgpvewlkpytdeTIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIekwgrvpalgceatFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDskrnelpppvtvwewgwtrsAETWNGRAAMLAVLVLLVLEVttgegflhqwgilplfq
mkmqmnsatapcppsscsTSSTFPPPPRFtsvsrnsksplalPRAVCTSQRMYRSagvpneaylssnTSTNYVVSRYSFGWSETQPILPKQSVNKDLSPLAALVTSKSqnfstaslvgdekIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFIsvvrapkskegyasigggsplrrITDAQAEELRKslweknlpakvYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPqfsistsgssLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTlayqsrvgpvewlKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAtydskrnelpppvtVWEWGWTRSAETWNGRAAMLAVLVLLVLEVTTGegflhqwgilplfq
MKMQMNsatapcppsscstsstfpppprftsvsrNSKSPLALPRAVCTSQRMYRSAGVPNEAYLSSNTSTNYVVSRYSFGWSETQPILPKQSVNKDLSPLAALVTSKSQNFSTASLVGDEKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDSKRNELPPPVTVWEWGWTRSAETWNGRaamlavlvllvlEVTTGEGFLHQWGILPLFQ
************************************************************EAYLSSNTSTNYVVSRYSFGWSETQPIL***********LAALVT****NFSTASLVGDEKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAP*************************LRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDSKRNELPPPVTVWEWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWGILPLF*
**************************************************************************************************************************GVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYVG*********************************PPPVTVWEWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWGILPLFQ
******************************************PRAVCTSQRMYRSAGVPNEAYLSSNTSTNYVVSRYSFGWSETQPILPKQSVNKDLSPLAALVTSKSQNFSTASLVGDEKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDSKRNELPPPVTVWEWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWGILPLFQ
************************************KSPLALPRAVCTSQRMYRSAGVPNEAYLSSNTSTNYVVSRYSF***************************************DEKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDSKRNELPPPVTVWEWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWGILPLFQ
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MKMQMNSATAPCPPSSCSTSSTFPPPPRFTSVSRNSKSPLALPRAVCTSQRMYRSAGVPNEAYLSSNTSTNYVVSRYSFGWSETQPILPKQSVNKDLSPLAALVTSKSQNFSTASLVGDEKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDSKRNELPPPVTVWEWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWGILPLFQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query534 2.2.26 [Sep-21-2011]
A2Y3Q5526 Ferrochelatase-2, chlorop N/A no 0.938 0.952 0.789 0.0
Q0DIV0526 Ferrochelatase-2, chlorop yes no 0.938 0.952 0.789 0.0
O04921512 Ferrochelatase-2, chlorop yes no 0.930 0.970 0.754 0.0
Q69TB1482 Ferrochelatase-1, chlorop no no 0.769 0.852 0.627 1e-154
P42044514 Ferrochelatase-2, chlorop N/A no 0.625 0.649 0.742 1e-153
P42045484 Ferrochelatase-2, chlorop N/A no 0.724 0.799 0.664 1e-153
P42043466 Ferrochelatase-1, chlorop no no 0.640 0.733 0.710 1e-149
B2J9P0388 Ferrochelatase OS=Nostoc yes no 0.720 0.992 0.560 1e-126
Q10WR6387 Ferrochelatase OS=Trichod yes no 0.720 0.994 0.568 1e-125
Q5N2B2387 Ferrochelatase OS=Synecho yes no 0.720 0.994 0.570 1e-125
>sp|A2Y3Q5|HEMH_ORYSI Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. indica GN=HEMH PE=2 SV=2 Back     alignment and function desciption
 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/517 (78%), Positives = 445/517 (86%), Gaps = 16/517 (3%)

Query: 21  STFP--PPPRFTSVSRNSKSPLALPRAVCTSQRMYRSAGVPNEAYLSSNTSTNYVVSRYS 78
           S FP  P PR      +S+  L+   A+ +     R+     + Y   +++      +  
Sbjct: 23  SHFPKRPAPR-----NSSRVNLSRTYAIKSCSVSSRTGLCLGQCYHKKSSAC-----KCK 72

Query: 79  FGWSETQPILP-KQSVNKDLSPLAALVTSKSQNFSTASLVGDEKIGVLLLNLGGPETLED 137
            GWS +QP+   +  +    S   A++TS+S +F T  LVG+EKIGVLLLNLGGPETL+D
Sbjct: 73  LGWS-SQPLSSLRHHLRVHSSASEAVLTSQS-DF-TKLLVGNEKIGVLLLNLGGPETLDD 129

Query: 138 VQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQ 197
           VQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLR+ITDAQ
Sbjct: 130 VQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRQITDAQ 189

Query: 198 AEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSS 257
           AE LRK+L +K++PAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSS
Sbjct: 190 AEALRKALCDKDIPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSS 249

Query: 258 LRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHG 317
           LRLLE IFREDEYLVNMQHTVIPSWYQREGYI AMA LIEKEL+ F  P++VMIFFSAHG
Sbjct: 250 LRLLEGIFREDEYLVNMQHTVIPSWYQREGYIKAMATLIEKELRTFSEPQKVMIFFSAHG 309

Query: 318 VPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETII 377
           VPLAYVEEAGDPYKAEMEECVDLIMEELEKR ITN+ TLAYQSRVGPVEWL+PYTDETII
Sbjct: 310 VPLAYVEEAGDPYKAEMEECVDLIMEELEKRGITNSCTLAYQSRVGPVEWLRPYTDETII 369

Query: 378 KLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDL 437
           +LGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELAL+SGI+ WGRVPALGCE TFI+DL
Sbjct: 370 ELGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIKHWGRVPALGCEPTFITDL 429

Query: 438 ADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDSKRNELPPPVTVWEWGWTRSA 497
           ADAVIESLPYVGAMAVSNLEARQ LVPLGSVEELLA YDSKR+ELPPPVTVWEWGWT+SA
Sbjct: 430 ADAVIESLPYVGAMAVSNLEARQPLVPLGSVEELLAAYDSKRDELPPPVTVWEWGWTKSA 489

Query: 498 ETWNGRAAMLAVLVLLVLEVTTGEGFLHQWGILPLFQ 534
           ETWNGRAAMLAVL LLVLEVTTGEGFLHQWGILPLF 
Sbjct: 490 ETWNGRAAMLAVLALLVLEVTTGEGFLHQWGILPLFH 526
Catalyzes the ferrous insertion into protoporphyrin IX.
Oryza sativa subsp. indica (taxid: 39946)
EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: .EC: 1
>sp|Q0DIV0|HEMH2_ORYSJ Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0361200 PE=2 SV=1 Back     alignment and function description
>sp|O04921|HEMH2_ARATH Ferrochelatase-2, chloroplastic OS=Arabidopsis thaliana GN=At2g30390 PE=2 SV=1 Back     alignment and function description
>sp|Q69TB1|HEMH1_ORYSJ Ferrochelatase-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0297000 PE=2 SV=1 Back     alignment and function description
>sp|P42044|HEMH_CUCSA Ferrochelatase-2, chloroplastic OS=Cucumis sativus GN=HEMH PE=2 SV=1 Back     alignment and function description
>sp|P42045|HEMH_HORVU Ferrochelatase-2, chloroplastic OS=Hordeum vulgare GN=HEMH PE=2 SV=1 Back     alignment and function description
>sp|P42043|HEMH1_ARATH Ferrochelatase-1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=HEM15 PE=2 SV=1 Back     alignment and function description
>sp|B2J9P0|HEMH_NOSP7 Ferrochelatase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemH PE=3 SV=1 Back     alignment and function description
>sp|Q10WR6|HEMH_TRIEI Ferrochelatase OS=Trichodesmium erythraeum (strain IMS101) GN=hemH PE=3 SV=1 Back     alignment and function description
>sp|Q5N2B2|HEMH_SYNP6 Ferrochelatase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query534
357520255527 Ferrochelatase [Medicago truncatula] gi| 0.986 1.0 0.818 0.0
359480786524 PREDICTED: ferrochelatase-2, chloroplast 0.966 0.984 0.852 0.0
356512900531 PREDICTED: ferrochelatase-2, chloroplast 0.955 0.960 0.852 0.0
356527196531 PREDICTED: ferrochelatase-2, chloroplast 0.955 0.960 0.847 0.0
296082661524 unnamed protein product [Vitis vinifera] 0.966 0.984 0.841 0.0
255544441510 ferrochelatase, putative [Ricinus commun 0.934 0.978 0.846 0.0
449444300522 PREDICTED: ferrochelatase-2, chloroplast 0.938 0.959 0.813 0.0
356516425530 PREDICTED: ferrochelatase-2, chloroplast 0.949 0.956 0.802 0.0
356508910532 PREDICTED: ferrochelatase-2, chloroplast 0.955 0.958 0.792 0.0
224122764506 predicted protein [Populus trichocarpa] 0.940 0.992 0.803 0.0
>gi|357520255|ref|XP_003630416.1| Ferrochelatase [Medicago truncatula] gi|355524438|gb|AET04892.1| Ferrochelatase [Medicago truncatula] Back     alignment and taxonomy information
 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/530 (81%), Positives = 473/530 (89%), Gaps = 3/530 (0%)

Query: 5   MNSATAPCPPSSCSTSSTFPPPPRFTSVSRNSKSPLALPRAVCTSQRMYRSAGVPNEAYL 64
           MNS   P    S S+ S   P    T  SRN K PL LP+A+CT+Q+++R +G   EA  
Sbjct: 1   MNS---PIRAPSTSSCSYIRPHSCRTCASRNFKLPLLLPQAICTAQKLHRCSGGHTEASS 57

Query: 65  SSNTSTNYVVSRYSFGWSETQPILPKQSVNKDLSPLAALVTSKSQNFSTASLVGDEKIGV 124
           + N     +V ++S GWSE QP++ KQS+N+ L P+ ALVTS +Q+ S   L+GD+KIGV
Sbjct: 58  NVNPLKTCIVGKFSPGWSEAQPLVSKQSLNRHLLPVEALVTSTTQDVSDTPLIGDDKIGV 117

Query: 125 LLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASI 184
           LLLNLGGPETL+DVQPFLFNLFADPDIIRLPRLF FLQKPLAQF+SV+RAPKSKEGYASI
Sbjct: 118 LLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFSFLQKPLAQFVSVLRAPKSKEGYASI 177

Query: 185 GGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLP 244
           GGGSPLRR+TDAQAEELRKSL+EKN+PA VYVGMRYWHPFTEEAIE IKRDGITKLVVLP
Sbjct: 178 GGGSPLRRMTDAQAEELRKSLFEKNVPANVYVGMRYWHPFTEEAIELIKRDGITKLVVLP 237

Query: 245 LYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFD 304
           LYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYI AMANLIEKEL+ FD
Sbjct: 238 LYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKGFD 297

Query: 305 SPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGP 364
            PE+VMIFFSAHGVP+AYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGP
Sbjct: 298 LPEKVMIFFSAHGVPVAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGP 357

Query: 365 VEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRV 424
           VEWLKPYTDETII+LG+KGVKSLLAVPISFVSEHIETLEEIDVEYKELAL+SGIE WGRV
Sbjct: 358 VEWLKPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIENWGRV 417

Query: 425 PALGCEATFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDSKRNELPP 484
           PALGCE TFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLA YDS+R ELPP
Sbjct: 418 PALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDSQRRELPP 477

Query: 485 PVTVWEWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWGILPLFQ 534
           P+ VWEWGWT+SAETWNGRAAM+AVL+LL LEVTTGEGFLHQWGILPLF+
Sbjct: 478 PILVWEWGWTKSAETWNGRAAMIAVLLLLFLEVTTGEGFLHQWGILPLFR 527

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359480786|ref|XP_002271927.2| PREDICTED: ferrochelatase-2, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356512900|ref|XP_003525152.1| PREDICTED: ferrochelatase-2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356527196|ref|XP_003532198.1| PREDICTED: ferrochelatase-2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|296082661|emb|CBI21666.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255544441|ref|XP_002513282.1| ferrochelatase, putative [Ricinus communis] gi|223547656|gb|EEF49150.1| ferrochelatase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449444300|ref|XP_004139913.1| PREDICTED: ferrochelatase-2, chloroplastic-like [Cucumis sativus] gi|12082085|dbj|BAB20760.1| ferrochelatase [Cucumis sativus] Back     alignment and taxonomy information
>gi|356516425|ref|XP_003526895.1| PREDICTED: ferrochelatase-2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356508910|ref|XP_003523196.1| PREDICTED: ferrochelatase-2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|224122764|ref|XP_002330470.1| predicted protein [Populus trichocarpa] gi|222871882|gb|EEF09013.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query534
TAIR|locus:2180642466 FC1 "ferrochelatase 1" [Arabid 0.636 0.729 0.714 3e-133
TIGR_CMR|GSU_3312317 GSU_3312 "ferrochelatase" [Geo 0.580 0.977 0.431 4.8e-62
UNIPROTKB|E1C7D2413 FECH "Ferrochelatase, mitochon 0.584 0.755 0.431 1e-61
UNIPROTKB|F1NBT4402 FECH "Ferrochelatase, mitochon 0.584 0.776 0.431 1e-61
UNIPROTKB|O42479402 FECH "Ferrochelatase, mitochon 0.584 0.776 0.431 1e-61
UNIPROTKB|P22830423 FECH "Ferrochelatase, mitochon 0.584 0.737 0.434 1.6e-61
RGD|1307556388 Fech "ferrochelatase" [Rattus 0.584 0.804 0.440 5.5e-61
UNIPROTKB|P22600416 FECH "Ferrochelatase, mitochon 0.582 0.747 0.432 5e-60
UNIPROTKB|F1P9A3423 FECH "Ferrochelatase" [Canis l 0.591 0.747 0.422 6.4e-60
ZFIN|ZDB-GENE-000928-1409 fech "ferrochelatase" [Danio r 0.584 0.762 0.425 2.2e-59
TAIR|locus:2180642 FC1 "ferrochelatase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1306 (464.8 bits), Expect = 3.0e-133, P = 3.0e-133
 Identities = 243/340 (71%), Positives = 295/340 (86%)

Query:   116 LVGDEKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAP 175
             +V ++KIGVLLLNLGGPETL DVQPFL+NLFADPDIIRLPR F+FLQ  +A+FISVVRAP
Sbjct:    84 VVAEDKIGVLLLNLGGPETLNDVQPFLYNLFADPDIIRLPRPFQFLQGTIAKFISVVRAP 143

Query:   176 KSKEGYASIGGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRD 235
             KSKEGYA+IGGGSPLR+ITD QA+ ++ SL  KN+ A VYVGMRYW+PFTEEA++QIK+D
Sbjct:   144 KSKEGYAAIGGGSPLRKITDEQADAIKMSLQAKNIAANVYVGMRYWYPFTEEAVQQIKKD 203

Query:   236 GITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANL 295
              IT+LVVLPLYPQ+SIST+GSS+R+L+ +FR+D YL  +   +I SWYQR GY+ +MA+L
Sbjct:   204 KITRLVVLPLYPQYSISTTGSSIRVLQDLFRKDPYLAGVPVAIIKSWYQRRGYVNSMADL 263

Query:   296 IEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
             IEKELQ F  P++VMIFFSAHGVP++YVE AGDPY+ +MEEC+DLIMEEL+ R + N + 
Sbjct:   264 IEKELQTFSDPKEVMIFFSAHGVPVSYVENAGDPYQKQMEECIDLIMEELKARGVLNDHK 323

Query:   356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALK 415
             LAYQSRVGPV+WLKPYTDE ++ LG+ GVKSLLAVP+SFVSEHIETLEEID+EY+ELAL+
Sbjct:   324 LAYQSRVGPVQWLKPYTDEVLVDLGKSGVKSLLAVPVSFVSEHIETLEEIDMEYRELALE 383

Query:   416 SGIEKWGRVPALGCEATFISDLADAVIESLPYVGAMAVSN 455
             SG+E WGRVPALG   +FI+DLADAVIESLP   AM+  N
Sbjct:   384 SGVENWGRVPALGLTPSFITDLADAVIESLPSAEAMSNPN 423
GO:0004325 "ferrochelatase activity" evidence=IEA;IGI;ISS
GO:0006783 "heme biosynthetic process" evidence=IEA;ISS;IMP
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009536 "plastid" evidence=IDA
GO:0006979 "response to oxidative stress" evidence=IEP;RCA
GO:0033014 "tetrapyrrole biosynthetic process" evidence=IMP
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0006944 "cellular membrane fusion" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0052542 "defense response by callose deposition" evidence=RCA
TIGR_CMR|GSU_3312 GSU_3312 "ferrochelatase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|E1C7D2 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NBT4 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|O42479 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P22830 FECH "Ferrochelatase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1307556 Fech "ferrochelatase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P22600 FECH "Ferrochelatase, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P9A3 FECH "Ferrochelatase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-000928-1 fech "ferrochelatase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A2BVI7HEMH_PROM54, ., 9, 9, ., 1, ., 10.51550.71910.9820yesno
P42044HEMH_CUCSA4, ., 9, 9, ., 1, ., 10.74250.62540.6498N/Ano
A9BEE9HEMH_PROM44, ., 9, 9, ., 1, ., 10.51810.72280.9872yesno
B8HK77HEMH_CYAP44, ., 9, 9, ., 1, ., 10.56820.72090.9948yesno
Q3ALP2HEMH_SYNSC4, ., 9, 9, ., 1, ., 10.53020.72280.9872yesno
Q8YQR8HEMH_NOSS14, ., 9, 9, ., 1, ., 10.55600.72090.9922yesno
Q10WR6HEMH_TRIEI4, ., 9, 9, ., 1, ., 10.56820.72090.9948yesno
A8G3P0HEMH_PROM24, ., 9, 9, ., 1, ., 10.50960.72470.9897yesno
B0JRN7HEMH_MICAN4, ., 9, 9, ., 1, ., 10.55790.71340.9844yesno
Q0DIV0HEMH2_ORYSJ4, ., 9, 9, ., 1, ., 10.78910.93820.9524yesno
Q5N2B2HEMH_SYNP64, ., 9, 9, ., 1, ., 10.57070.72090.9948yesno
Q31S00HEMH_SYNE74, ., 9, 9, ., 1, ., 10.57070.72090.9948yesno
Q7V6C6HEMH_PROMM4, ., 9, 9, ., 1, ., 10.51810.72280.9872yesno
B1XL79HEMH_SYNP24, ., 9, 9, ., 1, ., 10.56820.71910.9948yesno
O04921HEMH2_ARATH4, ., 9, 9, ., 1, ., 10.75460.93070.9707yesno
B7KGB9HEMH_CYAP74, ., 9, 9, ., 1, ., 10.55600.72090.9948yesno
Q8DGU6HEMH_THEEB4, ., 9, 9, ., 1, ., 10.56820.72090.9922yesno
A3PBP9HEMH_PROM04, ., 9, 9, ., 1, ., 10.51330.72280.9872yesno
Q31C09HEMH_PROM94, ., 9, 9, ., 1, ., 10.51330.72280.9872yesno
Q7U5G0HEMH_SYNPX4, ., 9, 9, ., 1, ., 10.53260.72280.9872yesno
A2BQ06HEMH_PROMS4, ., 9, 9, ., 1, ., 10.51200.72470.9897yesno
A5GJF5HEMH_SYNPW4, ., 9, 9, ., 1, ., 10.53260.72280.9872yesno
B2J9P0HEMH_NOSP74, ., 9, 9, ., 1, ., 10.56090.72090.9922yesno
Q3MCT9HEMH_ANAVT4, ., 9, 9, ., 1, ., 10.54870.72090.9922yesno
A5GS98HEMH_SYNR34, ., 9, 9, ., 1, ., 10.53640.71720.9896yesno
Q7V2F5HEMH_PROMP4, ., 9, 9, ., 1, ., 10.51310.71910.9820yesno
Q46GQ1HEMH_PROMT4, ., 9, 9, ., 1, ., 10.51820.72650.9923yesno
B7K399HEMH_CYAP84, ., 9, 9, ., 1, ., 10.55470.72280.9974yesno
A2C7Q7HEMH_PROM34, ., 9, 9, ., 1, ., 10.52050.72280.9872yesno
A2Y3Q5HEMH_ORYSI4, ., 9, 9, ., 1, ., 10.78910.93820.9524N/Ano
Q0I8L9HEMH_SYNS34, ., 9, 9, ., 1, ., 10.53260.72280.9872yesno
A2C0Y4HEMH_PROM14, ., 9, 9, ., 1, ., 10.51820.72650.9923yesno
Q7VD58HEMH_PROMA4, ., 9, 9, ., 1, ., 10.52060.72650.9923yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer4.99.1.10.979
3rd Layer4.99.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query534
PLN02449485 PLN02449, PLN02449, ferrochelatase 0.0
PRK00035333 PRK00035, hemH, ferrochelatase; Reviewed 1e-150
pfam00762311 pfam00762, Ferrochelatase, Ferrochelatase 1e-143
COG0276320 COG0276, HemH, Protoheme ferro-lyase (ferrochelata 1e-130
TIGR00109322 TIGR00109, hemH, ferrochelatase 1e-126
cd03411159 cd03411, Ferrochelatase_N, Ferrochelatase, N-termi 1e-68
cd00419135 cd00419, Ferrochelatase_C, Ferrochelatase, C-termi 1e-57
PRK12435311 PRK12435, PRK12435, ferrochelatase; Provisional 7e-38
cd03409101 cd03409, Chelatase_Class_II, Class II Chelatase: a 1e-09
cd03409101 cd03409, Chelatase_Class_II, Class II Chelatase: a 9e-07
>gnl|CDD|178068 PLN02449, PLN02449, ferrochelatase Back     alignment and domain information 
 Score =  817 bits (2112), Expect = 0.0
 Identities = 361/496 (72%), Positives = 401/496 (80%), Gaps = 11/496 (2%)

Query: 31  SVSRNSKSPLALPRAVCTSQRMYRSAGVPNEAYLSSNTSTNYVVSRYSFGWSETQPILPK 90
           +   +   PLA  ++    +    S  +     +SS  S +   S  +   S  +  L  
Sbjct: 1   TALSSGVRPLACSKSSSPPRAGSSSRSLSLIQCVSSFRSASSSSSSLALRSSSLR--LRA 58

Query: 91  QSVNKDLSPLAALVTSKSQNFSTASLVGDEKIGVLLLNLGGPETLEDVQPFLFNLFADPD 150
                  S  A       +  +    V +EK+GVLLLNLGGPETL+DVQPFL+NLFADPD
Sbjct: 59  NLAASSTSASAVDSPDDDEAVADHPKVSEEKVGVLLLNLGGPETLDDVQPFLYNLFADPD 118

Query: 151 IIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWEKNL 210
           IIRLPRLFRFLQKPLAQFIS +RAPKSKEGYASIGGGSPLR+ITD QAE L K+L  KNL
Sbjct: 119 IIRLPRLFRFLQKPLAQFISNLRAPKSKEGYASIGGGSPLRKITDEQAEALAKALEAKNL 178

Query: 211 PAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEY 270
           PAKVYVGMRYWHPFTEEAI+QIK DGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEY
Sbjct: 179 PAKVYVGMRYWHPFTEEAIDQIKADGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEY 238

Query: 271 LVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPY 330
           LVNMQHTVIPSWYQREGY+ AMA+LI+KEL  F  PE+V IFFSAHGVP++YVEEAGDPY
Sbjct: 239 LVNMQHTVIPSWYQREGYVKAMADLIKKELAKFSDPEEVHIFFSAHGVPVSYVEEAGDPY 298

Query: 331 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAV 390
           KA+MEECVDLIMEEL+ R I N +TLAYQSRVGPVEWLKPYTDETI++LG+KGVKSLLAV
Sbjct: 299 KAQMEECVDLIMEELKARGILNRHTLAYQSRVGPVEWLKPYTDETIVELGKKGVKSLLAV 358

Query: 391 PISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPYVGA 450
           PISFVSEHIETLEEID+EY+ELAL+SGIE WGRVPALGCE TFISDLADAVIE+LPYVGA
Sbjct: 359 PISFVSEHIETLEEIDMEYRELALESGIENWGRVPALGCEPTFISDLADAVIEALPYVGA 418

Query: 451 MAVSNLEARQSLVPLGSVEELLATYDSKRNELPPPVTVWEWGWTRSAETWNGRAAMLAVL 510
           MAVSNLEARQSLVPLGSVEELLATYDS+R EL PPV VWEWGWT        +AAMLAVL
Sbjct: 419 MAVSNLEARQSLVPLGSVEELLATYDSQRREL-PPVAVWEWGWT--------KAAMLAVL 469

Query: 511 VLLVLEVTTGEGFLHQ 526
           +LLVLEVT+G G LHQ
Sbjct: 470 LLLVLEVTSGFGNLHQ 485

Length = 485
>gnl|CDD|234585 PRK00035, hemH, ferrochelatase; Reviewed Back     alignment and domain information
>gnl|CDD|216106 pfam00762, Ferrochelatase, Ferrochelatase Back     alignment and domain information
>gnl|CDD|223353 COG0276, HemH, Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|232827 TIGR00109, hemH, ferrochelatase Back     alignment and domain information
>gnl|CDD|239504 cd03411, Ferrochelatase_N, Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>gnl|CDD|238240 cd00419, Ferrochelatase_C, Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>gnl|CDD|183526 PRK12435, PRK12435, ferrochelatase; Provisional Back     alignment and domain information
>gnl|CDD|239503 cd03409, Chelatase_Class_II, Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings Back     alignment and domain information
>gnl|CDD|239503 cd03409, Chelatase_Class_II, Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 534
PLN02449485 ferrochelatase 100.0
COG0276320 HemH Protoheme ferro-lyase (ferrochelatase) [Coenz 100.0
KOG1321395 consensus Protoheme ferro-lyase (ferrochelatase) [ 100.0
PF00762316 Ferrochelatase: Ferrochelatase; InterPro: IPR00101 100.0
TIGR00109322 hemH ferrochelatase. Human ferrochelatase, found a 100.0
PRK12435311 ferrochelatase; Provisional 100.0
PRK00035333 hemH ferrochelatase; Reviewed 100.0
cd03411159 Ferrochelatase_N Ferrochelatase, N-terminal domain 100.0
cd00419135 Ferrochelatase_C Ferrochelatase, C-terminal domain 100.0
PF06180262 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 99.85
COG4822265 CbiK Cobalamin biosynthesis protein CbiK, Co2+ che 99.8
PRK02395279 hypothetical protein; Provisional 99.7
PHA0233735 putative high light inducible protein 99.38
cd03409101 Chelatase_Class_II Class II Chelatase: a family of 99.26
cd03409101 Chelatase_Class_II Class II Chelatase: a family of 99.16
COG2138245 Sirohydrochlorin ferrochelatase [Inorganic ion tra 99.08
PLN02757154 sirohydrochlorine ferrochelatase 99.0
PLN00014250 light-harvesting-like protein 3; Provisional 98.89
cd03414117 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (Cbi 98.85
PRK00923126 sirohydrochlorin cobaltochelatase; Reviewed 98.82
PRK00923126 sirohydrochlorin cobaltochelatase; Reviewed 98.8
cd03412127 CbiK_N Anaerobic cobalamin biosynthetic cobalt che 98.79
PLN02757154 sirohydrochlorine ferrochelatase 98.77
PLN00084214 photosystem II subunit S (PsbS); Provisional 98.75
cd03414117 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (Cbi 98.73
cd03415125 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelata 98.7
cd03415125 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelata 98.61
PF01903105 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin 98.4
PRK05782335 bifunctional sirohydrochlorin cobalt chelatase/pre 98.32
cd03413103 CbiK_C Anaerobic cobalamin biosynthetic cobalt che 98.25
PRK05782 335 bifunctional sirohydrochlorin cobalt chelatase/pre 98.24
cd03412127 CbiK_N Anaerobic cobalamin biosynthetic cobalt che 98.19
cd03416101 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (Cbi 98.19
PF01903105 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin 98.16
cd03416101 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (Cbi 97.95
COG0276320 HemH Protoheme ferro-lyase (ferrochelatase) [Coenz 97.73
PRK00035333 hemH ferrochelatase; Reviewed 97.67
TIGR00109322 hemH ferrochelatase. Human ferrochelatase, found a 97.56
PLN02449485 ferrochelatase 97.53
COG2138245 Sirohydrochlorin ferrochelatase [Inorganic ion tra 97.48
PRK02395279 hypothetical protein; Provisional 97.46
PRK12435311 ferrochelatase; Provisional 97.43
cd03413103 CbiK_C Anaerobic cobalamin biosynthetic cobalt che 97.22
PF00504156 Chloroa_b-bind: Chlorophyll A-B binding protein; I 97.21
PF00504156 Chloroa_b-bind: Chlorophyll A-B binding protein; I 97.19
PF00762316 Ferrochelatase: Ferrochelatase; InterPro: IPR00101 96.94
PLN00147252 light-harvesting complex I chlorophyll-a/b binding 96.7
PLN00100246 light-harvesting complex chlorophyll-a/b protein o 96.63
PLN00089209 fucoxanthin-chlorophyll a/c binding protein; Provi 96.56
PLN00099243 light-harvesting complex IChlorophyll A-B binding 96.23
PLN00025262 photosystem II light harvesting chlorophyll a/b bi 96.21
PLN00048 262 photosystem I light harvesting chlorophyll a/b bin 96.19
PLN00101250 Photosystem I light-harvesting complex type 4 prot 96.02
PLN00048262 photosystem I light harvesting chlorophyll a/b bin 96.0
PLN00120202 fucoxanthin-chlorophyll a-c binding protein; Provi 95.99
cd00419135 Ferrochelatase_C Ferrochelatase, C-terminal domain 95.98
PLN00097244 photosystem I light harvesting complex Lhca2/4, ch 95.94
PLN00098267 light-harvesting complex I chlorophyll a/b-binding 95.9
PLN00171324 photosystem light-harvesting complex -chlorophyll 95.89
PLN00187286 photosystem II light-harvesting complex II protein 95.81
PF06180262 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 95.78
PLN00101 250 Photosystem I light-harvesting complex type 4 prot 95.78
KOG1321395 consensus Protoheme ferro-lyase (ferrochelatase) [ 95.5
PLN00098 267 light-harvesting complex I chlorophyll a/b-binding 95.12
PLN00097 244 photosystem I light harvesting complex Lhca2/4, ch 94.62
PLN00170 255 photosystem II light-harvesting-Chl-binding protei 94.44
PLN00025 262 photosystem II light harvesting chlorophyll a/b bi 94.42
PLN00187 286 photosystem II light-harvesting complex II protein 94.38
PLN00147 252 light-harvesting complex I chlorophyll-a/b binding 94.04
PLN00171 324 photosystem light-harvesting complex -chlorophyll 93.83
PLN00170255 photosystem II light-harvesting-Chl-binding protei 93.5
cd03411159 Ferrochelatase_N Ferrochelatase, N-terminal domain 92.04
PLN00100 246 light-harvesting complex chlorophyll-a/b protein o 91.39
COG4822265 CbiK Cobalamin biosynthesis protein CbiK, Co2+ che 91.0
PLN00099 243 light-harvesting complex IChlorophyll A-B binding 90.34
PLN00089209 fucoxanthin-chlorophyll a/c binding protein; Provi 90.13
PRK10481224 hypothetical protein; Provisional 86.02
COG1453391 Predicted oxidoreductases of the aldo/keto reducta 82.76
>PLN02449 ferrochelatase Back     alignment and domain information 
Probab=100.00  E-value=4e-107  Score=870.09  Aligned_cols=404  Identities=86%  Similarity=1.341  Sum_probs=380.1

Q ss_pred             ccCCCCCcEEEEEEccCCCCChhhHHHHHHhhcCCCCcccCCchhhhhhhhHHHHhhhccchhhHHhhhhcCCCCchHHH
Q 009474          114 ASLVGDEKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRI  193 (534)
Q Consensus       114 ~~~~~~~K~aVLLvnlGtP~s~~dV~~fL~~~l~D~~VI~lP~~~~~~~~~L~~~I~~~R~~ks~~~Y~~IgggSPL~~~  193 (534)
                      ....+++|+||||+|||||++++||++||+|||+|++||++|+++|++|++|+.+|+++|++|++++|++|||||||+.+
T Consensus        82 ~~~~~~~k~gVLLlNlGgPes~~dV~pFL~nlfsD~~II~lP~~~~~~~~~La~~Ia~~R~~ks~~~Y~~IGGgSPL~~i  161 (485)
T PLN02449         82 HPKVSEEKVGVLLLNLGGPETLDDVQPFLYNLFADPDIIRLPRLFRFLQKPLAQFISNLRAPKSKEGYASIGGGSPLRKI  161 (485)
T ss_pred             cccccCCceEEEEEeCCCCCChhHHHHHHHHhcCCCCeeeCchhhhHHHHHHHHHHhccCcHHHHHHHHHCCCCCchHHH
Confidence            44556678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCC
Q 009474          194 TDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVN  273 (534)
Q Consensus       194 T~~qa~~L~~~L~~~g~~v~V~~AMRY~~P~I~eaL~~L~~~G~~rIvvlPLyPqyS~~TtGs~~~~l~e~~~~~~~~~~  273 (534)
                      |++|+++|++.|++.+.+++|++|||||+|+++|++++|+++|+++||++|||||||.+|+||+++.+++++++......
T Consensus       162 T~~Qa~~Lq~~L~~~~~~~~V~~aMRY~~P~iedal~~l~~~G~~~iVvLPLYPQyS~sTtgSs~~~l~~~~~~~~~~~~  241 (485)
T PLN02449        162 TDEQAEALAKALEAKNLPAKVYVGMRYWHPFTEEAIDQIKADGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVN  241 (485)
T ss_pred             HHHHHHHHHHHHhccCCCeEEEEhhhcCCCCHHHHHHHHHhcCCCeEEEEECCcccccccHHHHHHHHHHHHhhcccccC
Confidence            99999999999988788899999999999999999999999999999999999999999999999999888876543345


Q ss_pred             ceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCCceEEEEeeCCcchhhhccCCCchHHHHHHHHHHHHHHhccccCCCC
Q 009474          274 MQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNA  353 (534)
Q Consensus       274 i~i~~I~~~~d~p~yI~Ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~ie~~GDpY~~q~~eTa~~v~e~Lg~~~~~~~  353 (534)
                      +++++|++||+||+||+|++++|++++++++.+++++|||||||+|+++++++||||++||++|+++|+++|+.++..++
T Consensus       242 ~~~~~I~~~~~~p~yI~A~a~~I~~~l~~~~~~~~~~LlFSAHGlP~~~v~~~GDpY~~q~~~ta~lI~~~L~~~~~~~~  321 (485)
T PLN02449        242 MQHTVIPSWYQREGYVKAMADLIKKELAKFSDPEEVHIFFSAHGVPVSYVEEAGDPYKAQMEECVDLIMEELKARGILNR  321 (485)
T ss_pred             CeeEEeccccCChHHHHHHHHHHHHHHHhccCcCCcEEEEecCCChhhhhhhcCCChHHHHHHHHHHHHHHhCCCCCCCC
Confidence            67899999999999999999999999988765667789999999999999778999999999999999999987543357


Q ss_pred             EEEEEecCcCCCCCCCCcHHHHHHHhhhcCCceEEEEccccchhhhhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHHH
Q 009474          354 YTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATF  433 (534)
Q Consensus       354 ~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIdiE~rela~e~G~~~~~rvp~LNdsp~f  433 (534)
                      |+++||||+||++||+|+|+|+|++|+++|+|+|+|||||||+||+|||||||+|++|+|+++|+++|.|+||||+||.|
T Consensus       322 ~~layQSR~Gp~eWL~P~t~d~L~~L~~~Gvk~VlvvPigFvSDhiETL~EiDiE~re~a~e~G~~~~~rVP~LN~~p~F  401 (485)
T PLN02449        322 HTLAYQSRVGPVEWLKPYTDETIVELGKKGVKSLLAVPISFVSEHIETLEEIDMEYRELALESGIENWGRVPALGCEPTF  401 (485)
T ss_pred             eEEEEeCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECCcccccchHHHHHHHHHHHHHHHHcCCceEEEcCCCCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCcccccccccccccccCcchhhhhhccccccccCCCCCcccccCccchhhhhhhhHHHHHHHHHH
Q 009474          434 ISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLATYDSKRNELPPPVTVWEWGWTRSAETWNGRAAMLAVLVLL  513 (534)
Q Consensus       434 I~~Lad~V~e~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~~~~~~~g~~~~aE~~NGR~AM~G~~~~~  513 (534)
                      |++|+++|.+++...+++..+....+..+...+.|++....|+..+|+++ |+..|.||||+        +||+||++++
T Consensus       402 I~~La~lV~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~  472 (485)
T PLN02449        402 ISDLADAVIEALPYVGAMAVSNLEARQSLVPLGSVEELLATYDSQRRELP-PVAVWEWGWTK--------AAMLAVLLLL  472 (485)
T ss_pred             HHHHHHHHHHHhhcccccccccCCCcccchhhcchHHHHhhhhhccccCC-Cchhhhhcccc--------hHHHHHHHHH
Confidence            99999999999998788888887778888888999999999999999999 99999999997        9999999999


Q ss_pred             HHHHHhCcchhhh
Q 009474          514 VLEVTTGEGFLHQ  526 (534)
Q Consensus       514 ~~e~~tg~~~~~~  526 (534)
                      ..|++||+|.+++
T Consensus       473 ~~~~~~~~~~~~~  485 (485)
T PLN02449        473 VLEVTSGFGNLHQ  485 (485)
T ss_pred             HHHHHcCCCcCCC
Confidence            9999999999874

>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] Back     alignment and domain information
>KOG1321 consensus Protoheme ferro-lyase (ferrochelatase) [Coenzyme transport and metabolism] Back     alignment and domain information
>PF00762 Ferrochelatase: Ferrochelatase; InterPro: IPR001015 Synonym(s): Protohaem ferro-lyase, Iron chelatase, etc Back     alignment and domain information
>TIGR00109 hemH ferrochelatase Back     alignment and domain information
>PRK12435 ferrochelatase; Provisional Back     alignment and domain information
>PRK00035 hemH ferrochelatase; Reviewed Back     alignment and domain information
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ] Back     alignment and domain information
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism] Back     alignment and domain information
>PRK02395 hypothetical protein; Provisional Back     alignment and domain information
>PHA02337 putative high light inducible protein Back     alignment and domain information
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings Back     alignment and domain information
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings Back     alignment and domain information
>COG2138 Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02757 sirohydrochlorine ferrochelatase Back     alignment and domain information
>PLN00014 light-harvesting-like protein 3; Provisional Back     alignment and domain information
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain Back     alignment and domain information
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed Back     alignment and domain information
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed Back     alignment and domain information
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain Back     alignment and domain information
>PLN02757 sirohydrochlorine ferrochelatase Back     alignment and domain information
>PLN00084 photosystem II subunit S (PsbS); Provisional Back     alignment and domain information
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain Back     alignment and domain information
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain Back     alignment and domain information
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain Back     alignment and domain information
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt Back     alignment and domain information
>PRK05782 bifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase; Validated Back     alignment and domain information
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain Back     alignment and domain information
>PRK05782 bifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase; Validated Back     alignment and domain information
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain Back     alignment and domain information
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain Back     alignment and domain information
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt Back     alignment and domain information
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain Back     alignment and domain information
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] Back     alignment and domain information
>PRK00035 hemH ferrochelatase; Reviewed Back     alignment and domain information
>TIGR00109 hemH ferrochelatase Back     alignment and domain information
>PLN02449 ferrochelatase Back     alignment and domain information
>COG2138 Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK02395 hypothetical protein; Provisional Back     alignment and domain information
>PRK12435 ferrochelatase; Provisional Back     alignment and domain information
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain Back     alignment and domain information
>PF00504 Chloroa_b-bind: Chlorophyll A-B binding protein; InterPro: IPR022796 The light-harvesting complex (LHC) consists of chlorophylls A and B and the chlorophyll A-B binding protein Back     alignment and domain information
>PF00504 Chloroa_b-bind: Chlorophyll A-B binding protein; InterPro: IPR022796 The light-harvesting complex (LHC) consists of chlorophylls A and B and the chlorophyll A-B binding protein Back     alignment and domain information
>PF00762 Ferrochelatase: Ferrochelatase; InterPro: IPR001015 Synonym(s): Protohaem ferro-lyase, Iron chelatase, etc Back     alignment and domain information
>PLN00147 light-harvesting complex I chlorophyll-a/b binding protein Lhca5; Provisional Back     alignment and domain information
>PLN00100 light-harvesting complex chlorophyll-a/b protein of photosystem I (Lhca); Provisional Back     alignment and domain information
>PLN00089 fucoxanthin-chlorophyll a/c binding protein; Provisional Back     alignment and domain information
>PLN00099 light-harvesting complex IChlorophyll A-B binding protein Lhca1; Provisional Back     alignment and domain information
>PLN00025 photosystem II light harvesting chlorophyll a/b binding protein; Provisional Back     alignment and domain information
>PLN00048 photosystem I light harvesting chlorophyll a/b binding protein 3; Provisional Back     alignment and domain information
>PLN00101 Photosystem I light-harvesting complex type 4 protein; Provisional Back     alignment and domain information
>PLN00048 photosystem I light harvesting chlorophyll a/b binding protein 3; Provisional Back     alignment and domain information
>PLN00120 fucoxanthin-chlorophyll a-c binding protein; Provisional Back     alignment and domain information
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>PLN00097 photosystem I light harvesting complex Lhca2/4, chlorophyll a/b binding; Provisional Back     alignment and domain information
>PLN00098 light-harvesting complex I chlorophyll a/b-binding protein (Lhac); Provisional Back     alignment and domain information
>PLN00171 photosystem light-harvesting complex -chlorophyll a/b binding protein Lhcb7; Provisional Back     alignment and domain information
>PLN00187 photosystem II light-harvesting complex II protein Lhcb4; Provisional Back     alignment and domain information
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ] Back     alignment and domain information
>PLN00101 Photosystem I light-harvesting complex type 4 protein; Provisional Back     alignment and domain information
>KOG1321 consensus Protoheme ferro-lyase (ferrochelatase) [Coenzyme transport and metabolism] Back     alignment and domain information
>PLN00098 light-harvesting complex I chlorophyll a/b-binding protein (Lhac); Provisional Back     alignment and domain information
>PLN00097 photosystem I light harvesting complex Lhca2/4, chlorophyll a/b binding; Provisional Back     alignment and domain information
>PLN00170 photosystem II light-harvesting-Chl-binding protein Lhcb6 (CP24); Provisional Back     alignment and domain information
>PLN00025 photosystem II light harvesting chlorophyll a/b binding protein; Provisional Back     alignment and domain information
>PLN00187 photosystem II light-harvesting complex II protein Lhcb4; Provisional Back     alignment and domain information
>PLN00147 light-harvesting complex I chlorophyll-a/b binding protein Lhca5; Provisional Back     alignment and domain information
>PLN00171 photosystem light-harvesting complex -chlorophyll a/b binding protein Lhcb7; Provisional Back     alignment and domain information
>PLN00170 photosystem II light-harvesting-Chl-binding protein Lhcb6 (CP24); Provisional Back     alignment and domain information
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>PLN00100 light-harvesting complex chlorophyll-a/b protein of photosystem I (Lhca); Provisional Back     alignment and domain information
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism] Back     alignment and domain information
>PLN00099 light-harvesting complex IChlorophyll A-B binding protein Lhca1; Provisional Back     alignment and domain information
>PLN00089 fucoxanthin-chlorophyll a/c binding protein; Provisional Back     alignment and domain information
>PRK10481 hypothetical protein; Provisional Back     alignment and domain information
>COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query534
2po7_A359 Crystal Structure Of Human Ferrochelatase Mutant Wi 1e-63
2qd3_A359 Wild Type Human Ferrochelatase Crystallized With Am 1e-60
2hre_A359 Structure Of Human Ferrochelatase Variant E343k Wit 4e-60
3aqi_A359 H240a Variant Of Human Ferrochelatase Length = 359 1e-59
1hrk_A359 Crystal Structure Of Human Ferrochelatase Length = 1e-59
2qd2_A359 F110a Variant Of Human Ferrochelatase With Protohem 1e-59
4f4d_A359 F337r Variant Of Human Ferrochelatase Length = 359 2e-59
2pnj_A359 Crystal Structure Of Human Ferrochelatase Mutant Wi 2e-58
2po5_A359 Crystal Structure Of Human Ferrochelatase Mutant Wi 3e-58
1l8x_A362 Crystal Structure Of Ferrochelatase From The Yeast, 3e-53
3goq_A310 Crystal Structure Of The Tyr13met Variant Of Bacill 2e-27
2ac2_A309 Crystal Structure Of The Tyr13phe Mutant Variant Of 3e-27
1c9e_A306 Structure Of Ferrochelatase With Copper(Ii) N- Meth 4e-27
1c1h_A310 Crystal Structure Of Bacillus Subtilis Ferrochelata 5e-27
1doz_A309 Crystal Structure Of Ferrochelatase Length = 309 5e-27
2h1v_A310 Crystal Structure Of The Lys87ala Mutant Variant Of 1e-26
2h1w_A310 Crystal Structure Of The His183ala Mutant Variant O 6e-26
2q3j_A309 Crystal Structure Of The His183ala Variant Of Bacil 7e-26
2ac4_A309 Crystal Structure Of The His183cys Mutant Variant O 9e-26
2c8j_A311 Crystal Structure Of Ferrochelatase Hemh-1 From Bac 5e-23
>pdb|2PO7|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His 341 Replaced By Cys Length = 359 Back     alignment and structure 
Iteration: 1

 Score =  241 bits (614), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/327 (42%), Positives = 191/327 (58%), Gaps = 15/327 (4%)
Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
           K G+L+LN+GGPETL DV  FL  LF D D++ LP     +Q  LA FI+    PK +E 
Sbjct: 4   KTGILMLNMGGPETLGDVHDFLLRLFLDQDLMTLP-----IQNKLAPFIAKRLTPKIQEQ 58
Query: 181 YASIGGGSPLRRITDAQAEELRKSLWE---KNLPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
           Y  IGGGSP++  T  Q E + K L E      P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59  YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
            + +    YPQ+S ST+GSSL  +   + +      M+ + I  W      I   A+ I 
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178
Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
           KEL +F  +   +V+I FSAH +P++ V   GDPY  E+   V  +ME LE     N Y 
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE---YCNPYR 234
Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
           L +QS+VGP+ WL P TDE+I  L ++G K++L VPI+F S+ IETL E+D+EY + LA 
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDCIETLYELDIEYSQVLAK 294
Query: 415 KSGIEKWGRVPALGCEATFISDLADAV 441
           + G+E   R  +L     F   LAD V
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLV 321
>pdb|2QD3|A Chain A, Wild Type Human Ferrochelatase Crystallized With Ammonium Sulfate Length = 359 Back     alignment and structure
>pdb|2HRE|A Chain A, Structure Of Human Ferrochelatase Variant E343k With Protoporphyrin Ix Bound Length = 359 Back     alignment and structure
>pdb|3AQI|A Chain A, H240a Variant Of Human Ferrochelatase Length = 359 Back     alignment and structure
>pdb|1HRK|A Chain A, Crystal Structure Of Human Ferrochelatase Length = 359 Back     alignment and structure
>pdb|2QD2|A Chain A, F110a Variant Of Human Ferrochelatase With Protoheme Bound Length = 359 Back     alignment and structure
>pdb|4F4D|A Chain A, F337r Variant Of Human Ferrochelatase Length = 359 Back     alignment and structure
>pdb|2PNJ|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With Phe 337 Replaced By Ala Length = 359 Back     alignment and structure
>pdb|2PO5|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His 263 Replaced By Cys Length = 359 Back     alignment and structure
>pdb|1L8X|A Chain A, Crystal Structure Of Ferrochelatase From The Yeast, Saccharomyces Cerevisiae, With Cobalt(Ii) As The Substrate Ion Length = 362 Back     alignment and structure
>pdb|3GOQ|A Chain A, Crystal Structure Of The Tyr13met Variant Of Bacillus Subtilis Ferrochelatase Length = 310 Back     alignment and structure
>pdb|2AC2|A Chain A, Crystal Structure Of The Tyr13phe Mutant Variant Of Bacillus Subtilis Ferrochelatase With Zn(2+) Bound At The Active Site Length = 309 Back     alignment and structure
>pdb|1C9E|A Chain A, Structure Of Ferrochelatase With Copper(Ii) N- Methylmesoporphyrin Complex Bound At The Active Site Length = 306 Back     alignment and structure
>pdb|1C1H|A Chain A, Crystal Structure Of Bacillus Subtilis Ferrochelatase In Complex With N-Methyl Mesoporphyrin Length = 310 Back     alignment and structure
>pdb|1DOZ|A Chain A, Crystal Structure Of Ferrochelatase Length = 309 Back     alignment and structure
>pdb|2H1V|A Chain A, Crystal Structure Of The Lys87ala Mutant Variant Of Bacillus Subtilis Ferrochelatase Length = 310 Back     alignment and structure
>pdb|2H1W|A Chain A, Crystal Structure Of The His183ala Mutant Variant Of Bacillus Subtilis Ferrochelatase Length = 310 Back     alignment and structure
>pdb|2Q3J|A Chain A, Crystal Structure Of The His183ala Variant Of Bacillus Subtilis Ferrochelatase In Complex With N-Methyl Mesoporphyrin Length = 309 Back     alignment and structure
>pdb|2AC4|A Chain A, Crystal Structure Of The His183cys Mutant Variant Of Bacillus Subtilis Ferrochelatase Length = 309 Back     alignment and structure
>pdb|2C8J|A Chain A, Crystal Structure Of Ferrochelatase Hemh-1 From Bacillus Anthracis, Str. Ames Length = 311 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query534
1lbq_A362 Ferrochelatase; rossmann fold, PI-helix, lyase; 2. 1e-164
3hcn_A359 Ferrochelatase, mitochondrial; metal selectivity, 1e-163
2h1v_A310 Ferrochelatase; rossman fold, PI-helix, lyase; 1.2 1e-143
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
2xvy_A269 Chelatase, putative; metal binding protein; HET: H 4e-06
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A Length = 362 Back     alignment and structure
 Score =  470 bits (1212), Expect = e-164
 Identities = 127/331 (38%), Positives = 182/331 (54%), Gaps = 15/331 (4%)

Query: 120 EKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKE 179
              G++L+N+GGP  +E+   FL+ LFAD D+I +   +   QK +A++I+  R PK ++
Sbjct: 6   SPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKY---QKTIAKYIAKFRTPKIEK 62

Query: 180 GYASIGGGSPLRRITDAQAEELRKSL---WEKNLPAKVYVGMRYWHPFTEEAIEQIKRDG 236
            Y  IGGGSP+R+ ++ QA E+ K L     +  P K YV  RY  P T E  +Q+ +DG
Sbjct: 63  QYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDG 122

Query: 237 ITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLI 296
           + K V    YP FS ST+GSS+  L    +  +   ++  +VI  W   EG I A +  I
Sbjct: 123 VKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENI 182

Query: 297 EKELQNFDSPEQ--VMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAY 354
            K+LQ F  P +  V++ FSAH +P+  V   GD Y AE+   V  IM++L   K  N Y
Sbjct: 183 TKKLQEFPQPVRDKVVLLFSAHSLPMDVVNT-GDAYPAEVAATVYNIMQKL---KFKNPY 238

Query: 355 TLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELAL 414
            L +QS+VGP  WL   T E    LG   V  L+ +PI+F S+HIETL EID+     + 
Sbjct: 239 RLVWQSQVGPKPWLGAQTAEIAEFLG-PKVDGLMFIPIAFTSDHIETLHEIDLGVIGES- 296

Query: 415 KSGIEKWGRVPALGCEATFISDLADAVIESL 445
               +K+ R  +L    TFI  +AD V   L
Sbjct: 297 -EYKDKFKRCESLNGNQTFIEGMADLVKSHL 326
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A* Length = 359 Back     alignment and structure
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A Length = 310 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A* Length = 269 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query534
3hcn_A359 Ferrochelatase, mitochondrial; metal selectivity, 100.0
1lbq_A362 Ferrochelatase; rossmann fold, PI-helix, lyase; 2. 100.0
2h1v_A310 Ferrochelatase; rossman fold, PI-helix, lyase; 1.2 100.0
2xvy_A269 Chelatase, putative; metal binding protein; HET: H 100.0
2jh3_A 474 Ribosomal protein S2-related protein; CBIX, SAD ph 99.95
2xwp_A264 Sirohydrochlorin cobaltochelatase; lyase, beta-alp 99.94
3lyh_A126 Cobalamin (vitamin B12) biosynthesis CBIX protein; 99.04
3lyh_A126 Cobalamin (vitamin B12) biosynthesis CBIX protein; 98.88
1tjn_A156 Sirohydrochlorin cobaltochelatase; AF0721, APC5049 98.82
2xws_A133 Sirohydrochlorin cobaltochelatase; lyase, beta-alp 98.82
2xws_A133 Sirohydrochlorin cobaltochelatase; lyase, beta-alp 98.79
1tjn_A156 Sirohydrochlorin cobaltochelatase; AF0721, APC5049 98.61
2xvy_A269 Chelatase, putative; metal binding protein; HET: H 98.25
2h1v_A310 Ferrochelatase; rossman fold, PI-helix, lyase; 1.2 97.92
2xwp_A264 Sirohydrochlorin cobaltochelatase; lyase, beta-alp 97.9
2jh3_A 474 Ribosomal protein S2-related protein; CBIX, SAD ph 97.88
1lbq_A362 Ferrochelatase; rossmann fold, PI-helix, lyase; 2. 97.71
2bhw_A232 Chlorophyll A-B binding protein AB80; LHC-II, phot 97.56
3pl9_A243 Chlorophyll A-B binding protein; CP29, light-harve 97.45
3hcn_A359 Ferrochelatase, mitochondrial; metal selectivity, 97.28
2wsc_2269 LHCA2, type II chlorophyll A/B binding protein fro 97.27
2wsc_3276 LHCA3, type II chlorophyll A/B binding protein fro 97.19
2wsc_1241 AT3G54890, LHCA1; photosynthesis, electron transfe 96.88
2wsc_4 251 Chlorophyll A-B binding protein P4, chloroplastic; 96.6
2wsc_3 276 LHCA3, type II chlorophyll A/B binding protein fro 95.72
3pl9_A 243 Chlorophyll A-B binding protein; CP29, light-harve 95.38
2wsc_4251 Chlorophyll A-B binding protein P4, chloroplastic; 95.28
2wsc_2 269 LHCA2, type II chlorophyll A/B binding protein fro 94.99
2bhw_A 232 Chlorophyll A-B binding protein AB80; LHC-II, phot 93.34
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-90  Score=724.27  Aligned_cols=340  Identities=42%  Similarity=0.688  Sum_probs=308.6

Q ss_pred             CCcEEEEEEccCCCCChhhHHHHHHhhcCCCCcccCCchhhhhhhhHHHHhhhccchhhHHhhhhcCCCCchHHHHHHHH
Q 009474          119 DEKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQA  198 (534)
Q Consensus       119 ~~K~aVLLvnlGtP~s~~dV~~fL~~~l~D~~VI~lP~~~~~~~~~L~~~I~~~R~~ks~~~Y~~IgggSPL~~~T~~qa  198 (534)
                      ++|+||||||||||++++||++||+|||+|++||++|.     +++|+++|+++|++|++++|+.|||||||+.+|++|+
T Consensus         2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~-----~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~   76 (359)
T 3hcn_A            2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI-----QNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQG   76 (359)
T ss_dssp             CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTT-----HHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHH
T ss_pred             CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccch-----HHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHH
Confidence            56899999999999999999999999999999999983     4689999999999999999999999999999999999


Q ss_pred             HHHHHHHhccC---CCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCce
Q 009474          199 EELRKSLWEKN---LPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQ  275 (534)
Q Consensus       199 ~~L~~~L~~~g---~~v~V~~AMRY~~P~I~eaL~~L~~~G~~rIvvlPLyPqyS~~TtGs~~~~l~e~~~~~~~~~~i~  275 (534)
                      ++|++.|++.+   .+++|++|||||+|+|+++|++|+++|+++|+++|||||||.+||||+++++.+.+++.+..+.++
T Consensus        77 ~~L~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~~~~~~~~~~~~  156 (359)
T 3hcn_A           77 EGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMK  156 (359)
T ss_dssp             HHHHHHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHTTCCCSSE
T ss_pred             HHHHHHHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHHHHHhccCCCCc
Confidence            99999998643   468999999999999999999999999999999999999999999999999988887665556678


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHhCCCC--CceEEEEeeCCcchhhhccCCCchHHHHHHHHHHHHHHhccccCCCC
Q 009474          276 HTVIPSWYQREGYITAMANLIEKELQNFDSP--EQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNA  353 (534)
Q Consensus       276 i~~I~~~~d~p~yI~Ala~~I~~~l~~~~~~--~~~~LLFSaHGlP~~~ie~~GDpY~~q~~eTa~~v~e~Lg~~~~~~~  353 (534)
                      +++|++|++||+||+|++++|++++++++.+  ++++|||||||+|++++ ++||||.+||++|+++|+++||..   ++
T Consensus       157 ~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~-~~GDpY~~q~~~t~~lv~e~Lg~~---~~  232 (359)
T 3hcn_A          157 WSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVV-NRGDPYPQEVSATVQKVMERLEYC---NP  232 (359)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHH-TTTCSHHHHHHHHHHHHHHHTTTC---SC
T ss_pred             eEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhc-ccCCCHHHHHHHHHHHHHHHcCCC---CC
Confidence            9999999999999999999999999887532  45689999999999999 899999999999999999999864   46


Q ss_pred             EEEEEecCcCCCCCCCCcHHHHHHHhhhcCCceEEEEccccchhhhhhhHhHHHHH-HHHHHHcCCeeEEEcCCCCCCHH
Q 009474          354 YTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEY-KELALKSGIEKWGRVPALGCEAT  432 (534)
Q Consensus       354 ~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIdiE~-rela~e~G~~~~~rvp~LNdsp~  432 (534)
                      |.++||||+|+.+||+|+|+|+|++|+++|+|+|+|+|||||+||+|||+|||+|+ +++|+++|++.|.|+||||+||.
T Consensus       233 ~~l~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~gFvsD~lETL~Eid~E~~~e~a~e~G~~~~~rip~LNd~p~  312 (359)
T 3hcn_A          233 YRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPL  312 (359)
T ss_dssp             EEEEEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECTTCCSCCCCCHHHHCHHHHHHHHHHTCCCEEEECCCSTTCHH
T ss_pred             EEEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECCccchhhHHhHHHHHHHHHHHHHHhCCCceEEEcCCCCCCHH
Confidence            99999999999999999999999999999999999999999999999999999998 58999999988999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCcccccccccccccccCcch
Q 009474          433 FISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSV  468 (534)
Q Consensus       433 fI~~Lad~V~e~L~~~~~~~~~~~~~~~~~~~~~~~  468 (534)
                      ||++|+++|.+++.. +.........|+...-...|
T Consensus       313 fi~~La~lv~~~l~~-~~~~~~~~~~~c~~c~~~~~  347 (359)
T 3hcn_A          313 FSKALADLVHSHIQS-NELCSKQLTLSCPLCVNPVC  347 (359)
T ss_dssp             HHHHHHHHHHHHHHH-TCSSCGGGGSCCTTCCCHHH
T ss_pred             HHHHHHHHHHHHHhc-CCccCcccCCCCCCCCchhh
Confidence            999999999998875 22222344445543333333
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A Back     alignment and structure
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A Back     alignment and structure
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A* Back     alignment and structure
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans} Back     alignment and structure
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A* Back     alignment and structure
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei} Back     alignment and structure
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei} Back     alignment and structure
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3 Back     alignment and structure
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A Back     alignment and structure
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A Back     alignment and structure
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3 Back     alignment and structure
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A* Back     alignment and structure
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A Back     alignment and structure
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A* Back     alignment and structure
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans} Back     alignment and structure
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A Back     alignment and structure
>2bhw_A Chlorophyll A-B binding protein AB80; LHC-II, photosynthesis, light-harvesting, membrane protein, chloroplast, chromophore, membrane; HET: LUX NEX XAT CLA CHL LHG DGD; 2.50A {Pisum sativum} PDB: 1vcr_A* 1rwt_A* Back     alignment and structure
>3pl9_A Chlorophyll A-B binding protein; CP29, light-harvesting COMP membrane protein, plant, photosynthesis, chloroplast, thyla photosystem II; HET: CLA CHL LUT XAT NEX G3P HTG; 2.80A {Spinacia oleracea} Back     alignment and structure
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A* Back     alignment and structure
>2wsc_2 LHCA2, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_2* 2wsf_2* 2o01_2* 3lw5_2* Back     alignment and structure
>2wsc_3 LHCA3, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Glycine max} PDB: 2wse_3* 2wsf_3* 3lw5_3* 2o01_3* Back     alignment and structure
>2wsc_1 AT3G54890, LHCA1; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Arabidopsis thaliana} PDB: 2wse_1* 2wsf_1* 2o01_1* 3lw5_1* Back     alignment and structure
>2wsc_4 Chlorophyll A-B binding protein P4, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_4* 2wsf_4* 3lw5_4* 2o01_4* Back     alignment and structure
>2wsc_3 LHCA3, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Glycine max} PDB: 2wse_3* 2wsf_3* 3lw5_3* 2o01_3* Back     alignment and structure
>3pl9_A Chlorophyll A-B binding protein; CP29, light-harvesting COMP membrane protein, plant, photosynthesis, chloroplast, thyla photosystem II; HET: CLA CHL LUT XAT NEX G3P HTG; 2.80A {Spinacia oleracea} Back     alignment and structure
>2wsc_4 Chlorophyll A-B binding protein P4, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_4* 2wsf_4* 3lw5_4* 2o01_4* Back     alignment and structure
>2wsc_2 LHCA2, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_2* 2wsf_2* 2o01_2* 3lw5_2* Back     alignment and structure
>2bhw_A Chlorophyll A-B binding protein AB80; LHC-II, photosynthesis, light-harvesting, membrane protein, chloroplast, chromophore, membrane; HET: LUX NEX XAT CLA CHL LHG DGD; 2.50A {Pisum sativum} PDB: 1vcr_A* 1rwt_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 534
d2hrca1359 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sa 5e-85
d1lbqa_356 c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Sacch 4e-82
d2hk6a1309 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtil 1e-74
d1qgoa_257 c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella ty 3e-11
>d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} Length = 359 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  265 bits (678), Expect = 5e-85
 Identities = 139/331 (41%), Positives = 194/331 (58%), Gaps = 15/331 (4%)

Query: 121 KIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 180
           K G+L+LN+GGPETL DV  FL  LF D D++ LP     +Q  LA FI+    PK +E 
Sbjct: 4   KTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP-----IQNKLAPFIAKRLTPKIQEQ 58

Query: 181 YASIGGGSPLRRITDAQAEELRKSLWEKN---LPAKVYVGMRYWHPFTEEAIEQIKRDGI 237
           Y  IGGGSP++  T  Q E + K L E +    P K Y+G RY HP TEEAIE+++RDG+
Sbjct: 59  YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118

Query: 238 TKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 297
            + +    YPQ+S ST+GSSL  +   + +      M+ + I  W      I   A+ I 
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178

Query: 298 KELQNF--DSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYT 355
           KEL +F  +   +V+I FSAH +P++ V   GDPY  E+   V  +ME   + +  N Y 
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVME---RLEYCNPYR 234

Query: 356 LAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE-LAL 414
           L +QS+VGP+ WL P TDE+I  L ++G K++L VPI+F S+HIETL E+D+EY + LA 
Sbjct: 235 LVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAK 294

Query: 415 KSGIEKWGRVPALGCEATFISDLADAVIESL 445
           + G+E   R  +L     F   LAD V   +
Sbjct: 295 ECGVENIRRAESLNGNPLFSKALADLVHSHI 325
>d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 356 Back     information, alignment and structure
>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]} Length = 309 Back     information, alignment and structure
>d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium [TaxId: 90371]} Length = 257 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query534
d1lbqa_356 Ferrochelatase {Baker's yeast (Saccharomyces cerev 100.0
d2hrca1359 Ferrochelatase {Human (Homo sapiens) [TaxId: 9606] 100.0
d2hk6a1309 Ferrochelatase {Bacillus subtilis [TaxId: 1423]} 100.0
d1qgoa_257 Cobalt chelatase CbiK {Salmonella typhimurium [Tax 99.92
d1tjna_125 Sirohydrochlorin cobaltochelatase CbiX {Archaeon A 98.3
d1qgoa_257 Cobalt chelatase CbiK {Salmonella typhimurium [Tax 98.1
d1tjna_125 Sirohydrochlorin cobaltochelatase CbiX {Archaeon A 97.95
d2hrca1359 Ferrochelatase {Human (Homo sapiens) [TaxId: 9606] 97.69
d2hk6a1309 Ferrochelatase {Bacillus subtilis [TaxId: 1423]} 97.66
d1lbqa_356 Ferrochelatase {Baker's yeast (Saccharomyces cerev 97.58
d1rwta_218 Chlorophyll a-b binding protein {Spinach (Spinacia 97.43
d1rwta_ 218 Chlorophyll a-b binding protein {Spinach (Spinacia 93.09
>d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1e-86  Score=692.66  Aligned_cols=319  Identities=39%  Similarity=0.657  Sum_probs=296.0

Q ss_pred             CCcEEEEEEccCCCCChhhHHHHHHhhcCCCCcccCCchhhhhhhhHHHHhhhccchhhHHhhhhcCCCCchHHHHHHHH
Q 009474          119 DEKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQA  198 (534)
Q Consensus       119 ~~K~aVLLvnlGtP~s~~dV~~fL~~~l~D~~VI~lP~~~~~~~~~L~~~I~~~R~~ks~~~Y~~IgggSPL~~~T~~qa  198 (534)
                      |.|+||||||||||++++||++||++||+|++||++|+++|   ++|..+|+++|++|++++|++|||||||+.+|++|+
T Consensus         1 k~~tgVLL~nlGtP~s~~~V~~yL~~fl~D~~vi~~p~~~~---~~l~~~I~~~R~~k~a~~Y~~IgggSPL~~~t~~qa   77 (356)
T d1lbqa_           1 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQ---KTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQA   77 (356)
T ss_dssp             CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSSSH---HHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHH
T ss_pred             CCceEEEEEECCCCCChHHHHHHHHHHcCCCccccCCHHHH---HHHhhhcCccCCHHHHHHHHHcCCCChhHHHHHHHH
Confidence            46899999999999999999999999999999999998665   467789999999999999999999999999999999


Q ss_pred             HHHHHHHhcc---CCCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCce
Q 009474          199 EELRKSLWEK---NLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQ  275 (534)
Q Consensus       199 ~~L~~~L~~~---g~~v~V~~AMRY~~P~I~eaL~~L~~~G~~rIvvlPLyPqyS~~TtGs~~~~l~e~~~~~~~~~~i~  275 (534)
                      ++|+++|++.   +.++.|++|||||+|+|+++|++|+++|+++|+++|||||||.+|||++++++.+++++....+.+.
T Consensus        78 ~~l~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ilvlPlyPqyS~sTt~s~~~~v~~~l~~~~~~~~~~  157 (356)
T d1lbqa_          78 TEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSIS  157 (356)
T ss_dssp             HHHHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCSE
T ss_pred             HHHHHHhhccccccCCceeEEEeccccccHHHHHHHHHhCCCcceEEEecchhhhHHHHHHHHHHHHHHHHHhhhhcccc
Confidence            9999999864   4578999999999999999999999999999999999999999999999999988887655555678


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHhCCCC--CceEEEEeeCCcchhhhccCCCchHHHHHHHHHHHHHHhccccCCCC
Q 009474          276 HTVIPSWYQREGYITAMANLIEKELQNFDSP--EQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNA  353 (534)
Q Consensus       276 i~~I~~~~d~p~yI~Ala~~I~~~l~~~~~~--~~~~LLFSaHGlP~~~ie~~GDpY~~q~~eTa~~v~e~Lg~~~~~~~  353 (534)
                      +++|++||+||.||+|++++|+++++.++.+  ++.+|||||||+|.+++ ++||||..||.+|+++++++++.+   ++
T Consensus       158 ~~~I~~~~~~p~yI~a~a~~i~~~l~~~~~~~~~~~~LlfS~HgiP~~~~-~~gdpY~~q~~~t~~~v~~~l~~~---~~  233 (356)
T d1lbqa_         158 WSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVV-NTGDAYPAEVAATVYNIMQKLKFK---NP  233 (356)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHH-TTTCSHHHHHHHHHHHHHHHTTTC---SC
T ss_pred             ceeecccccchhHHHHHHHHHHHHHHHcCcccccCcEEEEecCCcccchh-hcCCCchHHHHHHHHHHhhhcccc---cc
Confidence            9999999999999999999999999987643  45689999999999999 899999999999999999999864   47


Q ss_pred             EEEEEecCcCCCCCCCCcHHHHHHHhhhcCCceEEEEccccchhhhhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHHH
Q 009474          354 YTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATF  433 (534)
Q Consensus       354 ~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EIdiE~rela~e~G~~~~~rvp~LNdsp~f  433 (534)
                      |.++||||+|+++||+|+|+|+++.|++ |+|+|+|+|||||+||+|||||||+|+++.  +.|+..|.|+||||+||.|
T Consensus       234 ~~~~fQSr~g~~~WL~P~t~~~le~l~~-g~k~v~v~p~gFvsD~lETL~Eidie~~~~--~~gg~~f~~vp~lN~~p~f  310 (356)
T d1lbqa_         234 YRLVWQSQVGPKPWLGAQTAEIAEFLGP-KVDGLMFIPIAFTSDHIETLHEIDLGVIGE--SEYKDKFKRCESLNGNQTF  310 (356)
T ss_dssp             EEEEEECCCSSSCBCSCBHHHHHHHHGG-GCSCEEEECTTCSSCCHHHHTCCCCCCCTT--CTTGGGEEECCCCTTCHHH
T ss_pred             eEEEeeccccCCCCCCCchHHHHHHhcc-CCCeEEEECCcccccchhhHHHHHHHHHHH--HhCCCeEEEcCCCCCCHHH
Confidence            9999999999999999999999998865 899999999999999999999999998763  6788899999999999999


Q ss_pred             HHHHHHHHHHhCCC
Q 009474          434 ISDLADAVIESLPY  447 (534)
Q Consensus       434 I~~Lad~V~e~L~~  447 (534)
                      |++|+++|.++|++
T Consensus       311 i~~La~lV~~~l~~  324 (356)
T d1lbqa_         311 IEGMADLVKSHLQS  324 (356)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcc
Confidence            99999999999976
>d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1tjna_ c.92.1.3 (A:) Sirohydrochlorin cobaltochelatase CbiX {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1tjna_ c.92.1.3 (A:) Sirohydrochlorin cobaltochelatase CbiX {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1rwta_ f.43.1.1 (A:) Chlorophyll a-b binding protein {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d1rwta_ f.43.1.1 (A:) Chlorophyll a-b binding protein {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure