Citrus Sinensis ID: 009524

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530--
MENRIQTATKLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFLY
cHHHHHHHHHHccccHHHHHHcccccccccccccccccccEEEEEcccccccccccccccccEEEEEccccccccccccccHHHHHHHHHcccccccEEEEEccccccccHHHHHHHHHcccccccccEEEEEcccccccccccccccccccccccEEccccccccccccEEccccccccHHHccccccHHHHHHHHHcccHHHHHcHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHccccEEEEEccccccccccccccHHHHHHHHHccccHHHHHHHHcccccccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccHHHHHHHHHHEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcc
cccHHHHHHHcccccHHHHHHccccccccccccccccccEEEEEEccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEEccccccccccEEEccccHEEHHHHccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEEcccEEEEEcccEEcccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccEEEccccccHHHHHHHHHEEcccHHHHHHHHHHHHHHHHHcccccEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHc
MENRIQTATKLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILidgrdpnavdnegcalpTLVYLarekrpqyshnfkAGAMNALIRVSSkisngqvtlnvdcdmysnnsQAVRDALCFfmdeekghefafvqfpqnfdnvtknelysNSLRIYNevefegmdgyggpiycgsgcfhrreilcgrkydkeTKIELKRENDSKREESLLELEETSKALASCTYETNtqwgkeiglkygcpvedvITGISIqcqgwksvyckperdaflgvspTTLLQFLVQRKRWSEGDFQIMLcrysparyahgkislglrlgyccyclwapnclatLFYSIvpslyllkgiplfpmisspwiipFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTlgfsessfvvtekvadedVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLInwplyqglflrkdngkmpssvTTKSLVLALSVctcftfly
menriqtatklgriteeirmkHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILcgrkydketkielkrendskreeSLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFLY
MENRIQTATKLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDskreeslleleetskalasCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISlglrlgyccyclWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFLY
************RITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYD***************************ALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFL*
*ENRIQTATKLGRITEEIRMKHKGFS*WVS***RLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG*************************************YETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFLY
MENRIQTATKLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFLY
*****Q*****GRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKE************REESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFLY
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MENRIQTATKLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFLY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query532 2.2.26 [Sep-21-2011]
Q8VZK9729 Cellulose synthase-like p yes no 0.973 0.710 0.614 0.0
Q651X6728 Cellulose synthase-like p yes no 0.964 0.704 0.544 1e-177
Q651X7737 Cellulose synthase-like p yes no 0.971 0.701 0.523 1e-167
Q0DXZ1745 Cellulose synthase-like p no no 0.981 0.700 0.529 1e-163
Q0WVN5751 Cellulose synthase-like p no no 0.949 0.672 0.371 3e-98
Q8VYR4722 Cellulose synthase-like p no no 0.930 0.685 0.351 9e-97
Q570S7760 Cellulose synthase-like p no no 0.941 0.659 0.354 2e-92
Q69P511055 Cellulose synthase A cata no no 0.913 0.460 0.306 2e-72
A2Z1C81055 Cellulose synthase A cata N/A no 0.913 0.460 0.306 2e-72
Q9SWW61026 Cellulose synthase A cata no no 0.898 0.465 0.300 9e-72
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function desciption
 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/532 (61%), Positives = 409/532 (76%), Gaps = 14/532 (2%)

Query: 1   MENRIQTATKLGRITEEIRMKH-KGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCA 59
           M  RI+TA +LGRI EE R+K+  GFSQW + ++R +H TILQ+L+DGR+ N +     A
Sbjct: 211 MAARIETAARLGRIPEEARVKYGDGFSQWDADATRRNHGTILQVLVDGREGNTI-----A 265

Query: 60  LPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALC 119
           +PTLVYL+REKRPQ+ HNFKAGAMNAL+RVSSKI+ G++ LN+DCDMY+NNS++ RDALC
Sbjct: 266 IPTLVYLSREKRPQHHHNFKAGAMNALLRVSSKITCGKIILNLDCDMYANNSKSTRDALC 325

Query: 120 FFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHR 179
             +DE++G E AFVQFPQ FDNVT+N+LY + +R+  +VEF G+DG GGP+Y G+GCFHR
Sbjct: 326 ILLDEKEGKEIAFVQFPQCFDNVTRNDLYGSMMRVGIDVEFLGLDGNGGPLYIGTGCFHR 385

Query: 180 REILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGC 239
           R+++CGRKY +E + E         E  ++      KALASCTYE NTQWGKE+G+KYGC
Sbjct: 386 RDVICGRKYGEEEEEEESERIHENLEPEMI------KALASCTYEENTQWGKEMGVKYGC 439

Query: 240 PVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSP 299
           PVEDVITG++IQC+GWKS Y  PE+ AFLGV+PT L Q LVQ++RWSEGDFQIML +YSP
Sbjct: 440 PVEDVITGLTIQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLSKYSP 499

Query: 300 ARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAY 359
             Y  GKISLGL LGYCCYCLWAP+ L  L YS++ SL L KGIPLFP +SS W IPF Y
Sbjct: 500 VWYGKGKISLGLILGYCCYCLWAPSSLPVLIYSVLTSLCLFKGIPLFPKVSSSWFIPFGY 559

Query: 360 VMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVT 419
           V  A   YSLAEFLW GGT  GWWNEQR+WLY RT+SFLF F+D I K LG SES+FV+T
Sbjct: 560 VTVAATAYSLAEFLWCGGTFRGWWNEQRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVIT 619

Query: 420 EKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETM 479
            KVA+E+ ++RY++E+MEFG  S MF +L TL +LNLFC   AV +++ GDG     +TM
Sbjct: 620 AKVAEEEAAERYKEEVMEFGVESPMFLVLGTLGMLNLFCFAAAVARLVSGDG--GDLKTM 677

Query: 480 LLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFL 531
            +Q ++   LV+INWPLY+G+ LR+D GKMP SVT KS+VLALS CTC  FL
Sbjct: 678 GMQFVITGVLVVINWPLYKGMLLRQDKGKMPMSVTVKSVVLALSACTCLAFL 729
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function description
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 Back     alignment and function description
>sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 Back     alignment and function description
>sp|Q9SWW6|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query532
255563554 728 cellulose synthase, putative [Ricinus co 0.986 0.721 0.728 0.0
429326508 736 cellulose synthase-like protein [Populus 0.998 0.721 0.700 0.0
224061234 736 predicted protein [Populus trichocarpa] 0.998 0.721 0.706 0.0
296089936 710 unnamed protein product [Vitis vinifera] 0.990 0.742 0.719 0.0
449444188 733 PREDICTED: cellulose synthase-like prote 0.998 0.724 0.671 0.0
449462403 730 PREDICTED: cellulose synthase-like prote 0.998 0.727 0.671 0.0
449522323 748 PREDICTED: cellulose synthase-like prote 0.998 0.709 0.671 0.0
359494189 922 PREDICTED: cellulose synthase-like prote 0.973 0.561 0.726 0.0
255563552 938 coated vesicle membrane protein, putativ 0.986 0.559 0.669 0.0
357460145 747 Cellulose synthase-like protein E1 [Medi 0.996 0.709 0.672 0.0
>gi|255563554|ref|XP_002522779.1| cellulose synthase, putative [Ricinus communis] gi|223538017|gb|EEF39630.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/531 (72%), Positives = 446/531 (83%), Gaps = 6/531 (1%)

Query: 1   MENRIQTATKLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCAL 60
           ME+RI+TATKLGRI EE R KHKGFSQW SYSS+ DHDTILQILIDGRDPNA D +GCAL
Sbjct: 204 MEDRIETATKLGRIPEEARRKHKGFSQWDSYSSQRDHDTILQILIDGRDPNATDVDGCAL 263

Query: 61  PTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCF 120
           PTLVYLAREKRPQ  HNFKAGAMNALIRVSS ISNG++ LN+DCDMYSNNS++V+DALCF
Sbjct: 264 PTLVYLAREKRPQNPHNFKAGAMNALIRVSSAISNGEIILNLDCDMYSNNSKSVQDALCF 323

Query: 121 FMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRR 180
           FMDEEK H+ AFVQFPQ+F N+TKN+LY +SL++   VEF G+DG+GGP+Y GSGCFHRR
Sbjct: 324 FMDEEKSHDIAFVQFPQSFANITKNDLYGSSLKVIANVEFHGVDGFGGPLYIGSGCFHRR 383

Query: 181 EILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP 240
           ++LCGRK+ K  K E K +     ++S+ +LEE +K LASCTYE NTQWG E+GLKYGCP
Sbjct: 384 DVLCGRKFSKNCKFEWKNDEALNAKQSIQDLEEETKPLASCTYEQNTQWGNEMGLKYGCP 443

Query: 241 VEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPA 300
           VEDVITG+SIQC+GWKSVY  PER AFLGV+PTTL Q LVQ KRWSEGD QI+L +YSPA
Sbjct: 444 VEDVITGLSIQCKGWKSVYFSPERKAFLGVAPTTLSQTLVQHKRWSEGDLQILLSKYSPA 503

Query: 301 RYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYV 360
            YA+GKISLGL+LGYCCYCLWAPN LATL+Y+I PSL LLKGI LFP +SS W IPFAYV
Sbjct: 504 WYANGKISLGLQLGYCCYCLWAPNSLATLYYTIFPSLCLLKGISLFPQVSSLWFIPFAYV 563

Query: 361 MFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTE 420
           + AKY YSLAEFLWSGGT+LGWWNEQR+WLY RTTS+LFAF+D ILKT+G S+  FV+T 
Sbjct: 564 ITAKYVYSLAEFLWSGGTSLGWWNEQRIWLYKRTTSYLFAFLDTILKTVGLSDLDFVITA 623

Query: 421 KVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETML 480
           KVAD DV QRYE+EIMEFG +S MFTIL+TLA+LNL C +G VKKVI      + YETM 
Sbjct: 624 KVADGDVLQRYEEEIMEFGVSSPMFTILATLAMLNLVCFVGVVKKVI------RIYETMS 677

Query: 481 LQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFL 531
           LQILLC  LVLIN PLY+GLF+RKD GK+P S+  KS VLAL +CT FTFL
Sbjct: 678 LQILLCGVLVLINLPLYKGLFVRKDKGKLPGSLIVKSSVLALVICTSFTFL 728

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|429326508|gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa] Back     alignment and taxonomy information
>gi|224061234|ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|222847641|gb|EEE85188.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296089936|emb|CBI39755.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449444188|ref|XP_004139857.1| PREDICTED: cellulose synthase-like protein E1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449462403|ref|XP_004148930.1| PREDICTED: cellulose synthase-like protein E1-like [Cucumis sativus] gi|449518729|ref|XP_004166388.1| PREDICTED: cellulose synthase-like protein E1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449522323|ref|XP_004168176.1| PREDICTED: cellulose synthase-like protein E1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359494189|ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255563552|ref|XP_002522778.1| coated vesicle membrane protein, putative [Ricinus communis] gi|223538016|gb|EEF39629.1| coated vesicle membrane protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357460145|ref|XP_003600354.1| Cellulose synthase-like protein E1 [Medicago truncatula] gi|355489402|gb|AES70605.1| Cellulose synthase-like protein E1 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query532
TAIR|locus:2012050729 CSLE1 "AT1G55850" [Arabidopsis 0.973 0.710 0.582 1.2e-170
TAIR|locus:2138106751 CSLG3 "AT4G23990" [Arabidopsis 0.984 0.697 0.356 3.7e-87
TAIR|locus:2138116722 CSLG2 "AT4G24000" [Arabidopsis 0.936 0.689 0.342 5.6e-84
TAIR|locus:2138126760 CSLG1 "AT4G24010" [Arabidopsis 0.939 0.657 0.352 8.2e-83
TAIR|locus:21363081084 CESA2 "cellulose synthase A2" 0.332 0.163 0.430 2e-71
TAIR|locus:20525761088 CESA9 "cellulose synthase A9" 0.291 0.142 0.468 1.4e-70
TAIR|locus:21277761081 CESA1 "cellulose synthase 1" [ 0.327 0.160 0.427 2.3e-70
TAIR|locus:20400801065 CESA10 "cellulose synthase 10" 0.327 0.163 0.427 4.5e-70
TAIR|locus:21781931069 CESA5 "cellulose synthase 5" [ 0.338 0.168 0.435 5.4e-70
TAIR|locus:21567891065 CEV1 "CONSTITUTIVE EXPRESSION 0.312 0.155 0.444 6.7e-70
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1659 (589.1 bits), Expect = 1.2e-170, P = 1.2e-170
 Identities = 310/532 (58%), Positives = 390/532 (73%)

Query:     1 MENRIQTATKLGRITEEIRMKH-KGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCA 59
             M  RI+TA +LGRI EE R+K+  GFSQW + ++R +H TILQ+L+DGR+ N +     A
Sbjct:   211 MAARIETAARLGRIPEEARVKYGDGFSQWDADATRRNHGTILQVLVDGREGNTI-----A 265

Query:    60 LPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALC 119
             +PTLVYL+REKRPQ+ HNFKAGAMNAL+RVSSKI+ G++ LN+DCDMY+NNS++ RDALC
Sbjct:   266 IPTLVYLSREKRPQHHHNFKAGAMNALLRVSSKITCGKIILNLDCDMYANNSKSTRDALC 325

Query:   120 FFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHR 179
               +DE++G E AFVQFPQ FDNVT+N+LY + +R+  +VEF G+DG GGP+Y G+GCFHR
Sbjct:   326 ILLDEKEGKEIAFVQFPQCFDNVTRNDLYGSMMRVGIDVEFLGLDGNGGPLYIGTGCFHR 385

Query:   180 REILCGRKYDKETKIELKRENDXXXXXXXXXXXXXXXXXXXCTYETNTQWGKEIGLKYGC 239
             R+++CGRKY +E       E +                   CTYE NTQWGKE+G+KYGC
Sbjct:   386 RDVICGRKYGEE------EEEEESERIHENLEPEMIKALASCTYEENTQWGKEMGVKYGC 439

Query:   240 PVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSP 299
             PVEDVITG++IQC+GWKS Y  PE+ AFLGV+PT L Q LVQ++RWSEGDFQIML +YSP
Sbjct:   440 PVEDVITGLTIQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLSKYSP 499

Query:   300 ARYAHGKISXXXXXXXXXXXXWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAY 359
               Y  GKIS            WAP+ L  L YS++ SL L KGIPLFP +SS W IPF Y
Sbjct:   500 VWYGKGKISLGLILGYCCYCLWAPSSLPVLIYSVLTSLCLFKGIPLFPKVSSSWFIPFGY 559

Query:   360 VMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVT 419
             V  A   YSLAEFLW GGT  GWWNEQR+WLY RT+SFLF F+D I K LG SES+FV+T
Sbjct:   560 VTVAATAYSLAEFLWCGGTFRGWWNEQRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVIT 619

Query:   420 EKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETM 479
              KVA+E+ ++RY++E+MEFG  S MF +L TL +LNLFC   AV +++ GDG     +TM
Sbjct:   620 AKVAEEEAAERYKEEVMEFGVESPMFLVLGTLGMLNLFCFAAAVARLVSGDG--GDLKTM 677

Query:   480 LLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFL 531
              +Q ++   LV+INWPLY+G+ LR+D GKMP SVT KS+VLALS CTC  FL
Sbjct:   678 GMQFVITGVLVVINWPLYKGMLLRQDKGKMPMSVTVKSVVLALSACTCLAFL 729
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0009832 "plant-type cell wall biogenesis" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VZK9CSLE1_ARATH2, ., 4, ., 1, ., -0.61460.97360.7105yesno
Q651X7CSLE1_ORYSJ2, ., 4, ., 1, ., -0.52310.97180.7014yesno
Q651X6CSLE6_ORYSJ2, ., 4, ., 1, ., -0.54440.96420.7046yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query532
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 1e-153
PLN021891040 PLN02189, PLN02189, cellulose synthase 4e-85
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 6e-84
PLN02190756 PLN02190, PLN02190, cellulose synthase-like protei 8e-76
PLN024361094 PLN02436, PLN02436, cellulose synthase A 2e-44
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 2e-43
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 1e-42
PLN02195977 PLN02195, PLN02195, cellulose synthase A 3e-42
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 3e-42
PLN024001085 PLN02400, PLN02400, cellulose synthase 2e-40
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 4e-40
PLN024001085 PLN02400, PLN02400, cellulose synthase 2e-39
PLN024361094 PLN02436, PLN02436, cellulose synthase A 1e-37
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 7e-37
PLN02195977 PLN02195, PLN02195, cellulose synthase A 2e-35
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 6e-24
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 6e-24
COG1215439 COG1215, COG1215, Glycosyltransferases, probably i 4e-09
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 1e-07
pfam13641229 pfam13641, Glyco_tranf_2_3, Glycosyltransferase li 4e-04
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  454 bits (1171), Expect = e-153
 Identities = 202/531 (38%), Positives = 304/531 (57%), Gaps = 21/531 (3%)

Query: 1   MENRIQTATKLGRITEEI---RMKHKGFSQWVSYSSRLDHDTILQILID-GRDPNAVDNE 56
           M+ R++   + G+++ +      + + FS+W    +R DH T++Q+L++ G+D    D  
Sbjct: 203 MKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKD---KDIT 259

Query: 57  GCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRD 116
           G  +P L+Y++REK     H+FKAGA+N L+RVS+ ++N  + L +DCDMYSN+ Q    
Sbjct: 260 GHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLR 319

Query: 117 ALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGC 176
           ALC+ +D     +  +VQFPQ F  + KN++Y+  L+   ++   GMDG  GP Y G+GC
Sbjct: 320 ALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGC 379

Query: 177 FHRREILCG---RKYDKETKIELKRE---NDSKREESLLELEETSKALASCTYETNTQWG 230
           F RR +  G        E   EL  +   + S + + +L L   +  +A C YE  T WG
Sbjct: 380 FFRRRVFYGGPSSLILPEIP-ELNPDHLVDKSIKSQEVLAL---AHHVAGCNYENQTNWG 435

Query: 231 KEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDF 290
            ++G +YG  VED  TG  +QC+GWKS++C P+R AFLG SP  L   L Q+KRWS G  
Sbjct: 436 SKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLL 495

Query: 291 QIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMIS 350
           ++   +YSP  +    I L + LGY  Y  W    +    Y+ +P L LL G+ +FP  S
Sbjct: 496 EVAFSKYSPITFGVKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKAS 555

Query: 351 SPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLG 410
            PW   + ++    Y   L +FL SGGT   WWN+QR+W+    +SFLF  ++ +LKTLG
Sbjct: 556 DPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLG 615

Query: 411 FSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGD 470
            S   F VT KV DE+ S+RYE+ I EFG +S MF  L+T A++NL   +  + ++    
Sbjct: 616 ISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQR 675

Query: 471 GYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLA 521
                 E + LQ+ L    V+  WP+Y+ + LR D+GK+P  +T  S+VLA
Sbjct: 676 N----LEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLA 722

Length = 734
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|222281 pfam13641, Glyco_tranf_2_3, Glycosyltransferase like family 2 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 532
PF03552720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PLN02893734 Cellulose synthase-like protein 100.0
PLN024361094 cellulose synthase A 100.0
PLN024001085 cellulose synthase 100.0
PLN026381079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN021891040 cellulose synthase 100.0
PLN02195977 cellulose synthase A 100.0
PLN029151044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02190756 cellulose synthase-like protein 100.0
PLN022481135 cellulose synthase-like protein 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK05454691 glucosyltransferase MdoH; Provisional 100.0
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 100.0
PRK14583444 hmsR N-glycosyltransferase; Provisional 99.97
COG1215439 Glycosyltransferases, probably involved in cell wa 99.96
PRK11204420 N-glycosyltransferase; Provisional 99.96
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 99.95
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.94
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.93
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.91
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.91
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.91
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.9
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.88
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.87
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 99.84
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.84
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.84
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.83
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.82
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.81
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.78
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.73
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.67
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.67
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.66
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.59
cd06438183 EpsO_like EpsO protein participates in the methano 99.52
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.38
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.36
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.34
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.29
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.29
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 99.27
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.26
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 99.21
cd06442224 DPM1_like DPM1_like represents putative enzymes si 99.2
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 99.13
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 99.13
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 99.13
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 99.13
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 99.07
cd06423180 CESA_like CESA_like is the cellulose synthase supe 99.07
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 99.02
cd04188211 DPG_synthase DPG_synthase is involved in protein N 98.98
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 98.96
PRK10073328 putative glycosyl transferase; Provisional 98.96
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 98.88
PRK10063248 putative glycosyl transferase; Provisional 98.83
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 98.8
KOG2571862 consensus Chitin synthase/hyaluronan synthase (gly 98.78
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 98.68
PRK10018279 putative glycosyl transferase; Provisional 98.63
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 98.6
COG1216305 Predicted glycosyltransferases [General function p 98.55
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 98.35
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 98.21
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 98.13
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 97.82
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 97.54
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 96.92
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 95.93
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 95.45
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 93.16
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 92.7
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 92.57
KOG2977323 consensus Glycosyltransferase [General function pr 87.53
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 81.72
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information 
Probab=100.00  E-value=7.5e-135  Score=1102.85  Aligned_cols=519  Identities=43%  Similarity=0.774  Sum_probs=475.8

Q ss_pred             CcchhhHhh-hcCCccHHHHhhcCCcccccCCCCCCCCCCEEEEEeCCCChhHHhhhccCCCcEEEEEeccCCCCCCCCc
Q 009524            1 MENRIQTAT-KLGRITEEIRMKHKGFSQWVSYSSRLDHDTILQILIDGRDPNAVDNEGCALPTLVYLAREKRPQYSHNFK   79 (532)
Q Consensus         1 ~~~ri~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dhp~~v~Vldd~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~K   79 (532)
                      ||+|||+++ +.+++||+.|.|+|| ++|++ ++++|||++|||+.|++++.  |.+|+++|+++||+|||||+++||+|
T Consensus       109 ~k~ri~~~~~~~~~~~~~~~~~~~~-~~w~~-~~~~dH~~iiqv~~~~~~~~--~~~g~~lP~lvYvsREKrp~~~Hh~K  184 (720)
T PF03552_consen  109 FKVRIEALVAKIQKVPEEGWTMQDG-TPWPG-NTRRDHPGIIQVLLDNPGGK--DVDGNELPMLVYVSREKRPGYPHHFK  184 (720)
T ss_pred             HHHHHHHHhhhhhcccccceeccCC-CcCCC-CCCcCChhheEeeccCCCCc--ccccCcCCeEEEEeccCCCCCCchhh
Confidence            689999986 567899999999999 99995 79999999999999987643  57788899999999999999999999


Q ss_pred             HHHHHHHHHHcccCCCCcEEEEecCCCCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCcccccchhhHHhHHHH
Q 009524           80 AGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVE  159 (532)
Q Consensus        80 AGALN~~lr~s~~~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~nd~~~~~~~~~~~~~  159 (532)
                      |||||+++|+|+++||+|||+|+|||||+|||++++++||||+||+.++++||||+||+|+|+++||+|+|+++++|+++
T Consensus       185 AGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~~~~~~  264 (720)
T PF03552_consen  185 AGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRVFFDIN  264 (720)
T ss_pred             hcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCccceeeeecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhccCCceeecccceeehHhhccCCCChhhHH-----------------------Hhh----h-------------c
Q 009524          160 FEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKI-----------------------ELK----R-------------E  199 (532)
Q Consensus       160 ~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~-----------------------~~~----~-------------~  199 (532)
                      ++|+||+|||+|+||||+|||+||++..+....++                       ...    +             +
T Consensus       265 ~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (720)
T PF03552_consen  265 MRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFALEDIE  344 (720)
T ss_pred             ccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccccchhccccccccccccccccccc
Confidence            99999999999999999999999999755321000                       000    0             0


Q ss_pred             c----------------------c--------------h-hhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCC
Q 009524          200 N----------------------D--------------S-KREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVE  242 (532)
Q Consensus       200 ~----------------------g--------------~-~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtE  242 (532)
                      .                      |              + ....+.++++|||++|+||+||++|.||+|+||.|||+||
T Consensus       345 ~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~~~L~EA~~V~sC~YE~~T~WGkevGwiYGSvtE  424 (720)
T PF03552_consen  345 EGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVPRSPSPASLLEEAIHVASCGYEDKTEWGKEVGWIYGSVTE  424 (720)
T ss_pred             cccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcCCccccCCcccccceEEEeccc
Confidence            0                      0              0 0111345678999999999999999999999999999999


Q ss_pred             hHHHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccc-cCCcCccceeeecccccc
Q 009524          243 DVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYA-HGKISLGLRLGYCCYCLW  321 (532)
Q Consensus       243 D~~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~  321 (532)
                      |+.||++|||+||||+||+|+++||.|.||+|+.+.+.|++||+.|++||+++|+||+|++ .++|+++||++|++.++|
T Consensus       425 Dv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~y  504 (720)
T PF03552_consen  425 DVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYLNYMLY  504 (720)
T ss_pred             ccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999999999999987 578999999999999999


Q ss_pred             hhhHHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhHHHHH
Q 009524          322 APNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAF  401 (532)
Q Consensus       322 ~~~~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~  401 (532)
                      |++|+|.++|+++|++||++|++++|+++.+|+++|+++++++++++++|++|+|+++++||||||||+|.++++|++|+
T Consensus       505 pl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~LfAv  584 (720)
T PF03552_consen  505 PLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHLFAV  584 (720)
T ss_pred             HHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCeeeCcCCCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchhhHHHH
Q 009524          402 IDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLL  481 (532)
Q Consensus       402 ~~~~~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~~~~~~  481 (532)
                      +++++|.+|+++++|+||+|..+++..+.+  +.|+|+ ++++++|++|++++|++|+++|+++.+++ + ...|+.+++
T Consensus       585 l~~iLK~lg~s~t~F~VTsK~~dde~~~~~--ely~f~-wS~LfiP~tTllilNLva~v~Gi~r~i~~-g-~~~~g~l~g  659 (720)
T PF03552_consen  585 LQGILKVLGGSETSFTVTSKVSDDEDDKYA--ELYIFK-WSPLFIPPTTLLILNLVAFVVGISRAINS-G-YGSWGPLLG  659 (720)
T ss_pred             HHHHHHHHcCCccceeeccccccccccccc--cccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhcc-C-CCchhHHHH
Confidence            999999999999999999999885544443  467774 68999999999999999999999999876 2 257999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhcccCCCCCcchhHHHHHHHHHHHHHHhhh
Q 009524          482 QILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF  530 (532)
Q Consensus       482 ~~~~~~~~v~~~~P~~~gl~~r~~k~~~p~~~~~~s~~~~~~~~~~~~~  530 (532)
                      |+++++|+|+++|||+|||++|+|  |+|++|++||+++|++||++|+.
T Consensus       660 ~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv~  706 (720)
T PF03552_consen  660 QLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWVR  706 (720)
T ss_pred             HHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHhee
Confidence            999999999999999999999986  58999999999999999999874

The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query532
4hg6_A 802 Structure Of A Cellulose Synthase - Cellulose Trans 3e-08
>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 Back     alignment and structure 
Iteration: 1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 106/291 (36%), Gaps = 70/291 (24%)
Query: 63  LVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCDMYSNNSQAVRDALCFFM 122
           +VY  RE+    + + KAG M+A +    +   G++ +  D D   +     R    F  
Sbjct: 214 VVYSTRER----NEHAKAGNMSAAL----ERLKGELVVVFDADHVPSRDFLARTVGYFVE 265
Query: 123 DEEKGHEFAFVQFPQ---NFDNVTKNELYSNSLRIYNEVEF----EGMDGYGGPIYCGSG 175
           D +       VQ P    N D + +N    +     NE+ +     G+D +GG  +CGS 
Sbjct: 266 DPD----LFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSA 321
Query: 176 CFHRREILCGRKYDKETKIELKRENDXXXXXXXXXXXXXXXXXXXCTYETNTQWGKEIGL 235
              RR  L                                        E     G+ I  
Sbjct: 322 AVLRRRALD---------------------------------------EAGGFAGETI-- 340
Query: 236 KYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLC 295
                 ED  T + I  +GWKS+Y   +R    G+ P T   F+ QR RW+ G  Q++L 
Sbjct: 341 -----TEDAETALEIHSRGWKSLYI--DRAMIAGLQPETFASFIQQRGRWATGMMQMLLL 393
Query: 296 RYSPARYAHGKISXXXXXXXXXXXXWAPNCLATLFYSIVPSLYLLKGIPLF 346
           +    R   G I+            + P  L  + + + P +YL  GI +F
Sbjct: 394 KNPLFRRGLG-IAQRLCYLNSMSFWFFP--LVRMMFLVAPLIYLFFGIEIF 441

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query532
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 42.9 bits (100), Expect = 3e-04
 Identities = 73/484 (15%), Positives = 139/484 (28%), Gaps = 131/484 (27%)

Query: 17  EIRMKHKGFSQWVSYSSRLDHDTILQIL------IDGRDPNAVDNEGCALPTLVYLARE- 69
           + +M  K F  W++  +    +T+L++L      ID    +  D+    +   ++  +  
Sbjct: 177 QCKMDFKIF--WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH-SSNIKLRIHSIQAE 233

Query: 70  -KRPQYSHNFKAGAMNALIRVSSKISNGQV--TLNVDCDMY--SNNSQAVRDALCFFMDE 124
            +R   S  ++    N L+ V   + N +     N+ C +   +   Q V D L      
Sbjct: 234 LRRLLKSKPYE----NCLL-VLLNVQNAKAWNAFNLSCKILLTTRFKQ-VTDFL----SA 283

Query: 125 EKGHEFAFVQFPQNFDNVTKNELYSNSLRI-YNEVEFEGMDGYGGPIYCGSGCFHRREIL 183
                 +               L    L     ++  E +     P             +
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT--TNPRRLS---------I 332

Query: 184 CGRKYDKETKIELKRENDSKREESL-LELEETSKALASCTYETNTQWGKEIGLKY-GCPV 241
                      E  R+  +  +    +  ++ +  + S     N     E    +    V
Sbjct: 333 IA---------ESIRDGLATWDNWKHVNCDKLTTIIESS---LNVLEPAEYRKMFDRLSV 380

Query: 242 --EDVITGISIQ--CQGWKSVYCKPERDAFLGVSPTTLLQFLVQR----KRWSEG----- 288
                   I        W  V    + D         ++  L +     K+  E      
Sbjct: 381 FPPSA--HIPTILLSLIWFDV---IKSD------VMVVVNKLHKYSLVEKQPKESTISIP 429

Query: 289 DFQIMLCRYSPARYA-HGKISLGLRLGYCCYCLW--APNCLATLFYSIVPSLYLLKGI-- 343
              + L       YA H  I +        +      P  L   FYS +   + LK I  
Sbjct: 430 SIYLELKVKLENEYALHRSI-VDHYNIPKTFDSDDLIPPYLDQYFYSHIG--HHLKNIEH 486

Query: 344 ----PLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLF 399
                LF M+         ++ F         FL           EQ+    +R  S  +
Sbjct: 487 PERMTLFRMV---------FLDF--------RFL-----------EQK----IRHDSTAW 514

Query: 400 AFIDAILKTLGFSESSFVVTEK--VADEDVSQRYEKEIMEF--GAASSM----FTILSTL 451
               +IL TL          +     ++   +R    I++F      ++    +T L  +
Sbjct: 515 NASGSILNTL----QQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570

Query: 452 ALLN 455
           AL+ 
Sbjct: 571 ALMA 574

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query532
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 100.0
3bcv_A240 Putative glycosyltransferase protein; protein stru 99.41
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.39
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 99.37
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.31
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.26
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.25
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.24
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 98.95
4fix_A657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 98.94
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 98.84
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 98.62
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 98.4
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 98.36
2bo4_A397 Mannosylglycerate synthase; catalysis, glycosyltra 97.84
2zu9_A394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 94.98
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 92.59
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 90.92
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=100.00  E-value=5.1e-39  Score=367.81  Aligned_cols=389  Identities=20%  Similarity=0.276  Sum_probs=287.5

Q ss_pred             CCCCCCC---EEEEEeCCCChhHHhh---------------hc--cCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHccc
Q 009524           33 SRLDHDT---ILQILIDGRDPNAVDN---------------EG--CALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSK   92 (532)
Q Consensus        33 ~~~dhp~---~v~Vldd~~~~~~~~~---------------~~--~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~   92 (532)
                      ..+|||+   .|.|+|||++|++.+.               ..  .+-.++.|++|+++    +++|++|+|.+++.   
T Consensus       164 ~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~~~~~----~~GKa~alN~gl~~---  236 (802)
T 4hg6_A          164 KNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTRERN----EHAKAGNMSAALER---  236 (802)
T ss_dssp             HTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEECSSC----CSHHHHHHHHHHHH---
T ss_pred             HhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEEecCC----CCcchHHHHHHHHh---
Confidence            4678886   6999999997765210               00  01146889998873    47999999999998   


Q ss_pred             CCCCcEEEEecCCCCCCchHHHHHHHHHhh-cccCCCeEEEEeccceeecCCcc-------cccchhhHHhHHHHHhhhh
Q 009524           93 ISNGQVTLNVDCDMYSNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKN-------ELYSNSLRIYNEVEFEGMD  164 (532)
Q Consensus        93 ~s~~~~IlvlDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~n-------d~~~~~~~~~~~~~~~g~d  164 (532)
                       +++|||+++|||+++ +||++++++.+|. ||    ++++||+++.+.|.++.       ..+.++...++...+.+.+
T Consensus       237 -a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~dp----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (802)
T 4hg6_A          237 -LKGELVVVFDADHVP-SRDFLARTVGYFVEDP----DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLD  310 (802)
T ss_dssp             -CCCSEEEECCTTEEE-CTTHHHHHHHHHHHSS----SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHH
T ss_pred             -cCCCEEEEECCCCCc-ChHHHHHHHHHHhcCC----CeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHh
Confidence             799999999999999 7999999999995 66    79999999999886521       1233455677888899999


Q ss_pred             ccCCceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCCCChH
Q 009524          165 GYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDV  244 (532)
Q Consensus       165 ~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~svtED~  244 (532)
                      .+++++++|+++++||+++++              +|                                ||++++++||.
T Consensus       311 ~~~~~~~~G~~~~~Rr~al~~--------------vG--------------------------------gf~~~~~~ED~  344 (802)
T 4hg6_A          311 RWGGAFFCGSAAVLRRRALDE--------------AG--------------------------------GFAGETITEDA  344 (802)
T ss_dssp             HTTCCCCCSSSEEEEHHHHHH--------------HT--------------------------------TCCCSSSSHHH
T ss_pred             hcCCceecccchhhhHHHHHH--------------cC--------------------------------CcCCCCcchHH
Confidence            999999999999999999987              54                                88888999999


Q ss_pred             HHHHHHHHcCCEEEEecCCcccccccCCCCHHHHHHHHHHhcccchhhHHhhcCccccccCCcCccceeeecccccchhh
Q 009524          245 ITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPN  324 (532)
Q Consensus       245 ~t~~~l~~~Gwrs~y~~~~~~a~~g~aP~tl~~~l~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~  324 (532)
                      +++.+++++||+++|++.  +.+++++|+|+.++++||.||++|.+|+++.+ +|++  .+++++.||++|+....+++.
T Consensus       345 ~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~~-~pl~--~~~l~~~~rl~~l~~~~~~~~  419 (802)
T 4hg6_A          345 ETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRGRWATGMMQMLLLK-NPLF--RRGLGIAQRLCYLNSMSFWFF  419 (802)
T ss_dssp             HHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHHHHHHHHHHHHHHS-CTTS--CSSCCHHHHHHHHHHHHHTTH
T ss_pred             HHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHHHHHccHHHHHHHh-Cccc--cCCCCHHHHHHHHHHHHHHHH
Confidence            999999999999999953  35689999999999999999999999999865 6764  357999999999999999999


Q ss_pred             HHHHHHHHHHhHHHHhhCCCccccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHHHHHHhHHHHHHHH
Q 009524          325 CLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDA  404 (532)
Q Consensus       325 ~~~~l~~~~~P~l~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~lle~~~~g~~~~~ww~~~r~w~i~~~~~~l~~~~~~  404 (532)
                      +++.++++++|++++++++++++.....++..++..   .....++.....+.....||+..     ..+...++.+...
T Consensus       420 ~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~---~l~~~~~~~~~~~~~r~~~~~~l-----~~~~~~~~~~~a~  491 (802)
T 4hg6_A          420 PLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGY---LAVSFLVQNALFARQRWPLVSEV-----YEVAQAPYLARAI  491 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHH---HHHHHHHHHHHHTTTSCTTHHHH-----HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHH---HHHHHHHHHHHhcCcHHHHHHHH-----HHHHHHHHHHHHH
Confidence            999999999999999999988876443322211111   11111112222344444566532     2222233333344


Q ss_pred             HHHHhCCCCCCeeeCcCCCccchhhhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccchhhHHHHHHH
Q 009524          405 ILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQIL  484 (532)
Q Consensus       405 ~~k~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~~p~~~p~~~l~~l~l~alv~g~~~~~~~~~~~~~~~~~~~~~~  484 (532)
                      +...+++++.+|+||+|+.+.+.  .       +  .+++..|+.++++++++++++|+++.... .  ..+....+..+
T Consensus       492 l~~l~~~~~~~f~VT~Kg~~~~~--~-------~--~~~~~~p~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~  557 (802)
T 4hg6_A          492 VTTLLRPRSARFAVTAKDETLSE--N-------Y--ISPIYRPLLFTFLLCLSGVLATLVRWVAF-P--GDRSVLLVVGG  557 (802)
T ss_dssp             HHHHHSTTCCCCCCCCCCCCCSS--C-------C--BCTTCHHHHHHHHHHHHHHHHHHHHHHHC-G--GGHHHHHHHHH
T ss_pred             HHHHhCCCCCcceECCCCccccc--c-------c--hhhHHHHHHHHHHHHHHHHHHHHHHHhcc-C--CccchhhhhhH
Confidence            44446778899999999875532  1       1  13667888889999999999999998754 1  12333344455


Q ss_pred             HHHHHHHHHHHhhhhhhcccCCC
Q 009524          485 LCSALVLINWPLYQGLFLRKDNG  507 (532)
Q Consensus       485 ~~~~~v~~~~P~~~gl~~r~~k~  507 (532)
                      ++.+.+++..+.+.....|+.+.
T Consensus       558 w~~~~l~~l~~~~~~~~~~~~~R  580 (802)
T 4hg6_A          558 WAVLNVLLVGFALRAVAEKQQRR  580 (802)
T ss_dssp             HHHHHHHHHHHHHTTTBCCCCSC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcc
Confidence            66666666666665555554443
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query532
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.33
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 98.9
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 98.55
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 94.61
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=2.2e-12  Score=128.74  Aligned_cols=168  Identities=12%  Similarity=-0.011  Sum_probs=106.6

Q ss_pred             CCCCCC---EEEEEeCCCChhHH----hh-hccCCCcEEEEEeccCCCCCCCCcHHHHHHHHHHcccCCCCcEEEEecCC
Q 009524           34 RLDHDT---ILQILIDGRDPNAV----DN-EGCALPTLVYLAREKRPQYSHNFKAGAMNALIRVSSKISNGQVTLNVDCD  105 (532)
Q Consensus        34 ~~dhp~---~v~Vldd~~~~~~~----~~-~~~~~p~l~yv~Rekrp~~~~~~KAGALN~~lr~s~~~s~~~~IlvlDaD  105 (532)
                      .|.+|.   .|.|+||+|+|++.    ++ .....+.+.++..+++     .|.++|.|.|++.    +++|+|+++|+|
T Consensus        47 ~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n-----~G~~~a~N~Gi~~----a~gd~i~flD~D  117 (328)
T d1xhba2          47 NRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDAH  117 (328)
T ss_dssp             HSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEESS
T ss_pred             hcCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEeccc-----ccchHHHHHHHHh----hhcceeeecCcc
Confidence            345454   58899999987542    11 2222355777766552     5899999999998    899999999999


Q ss_pred             CCCCchHHHHHHHHHhhcccCCCeEEEEeccceeecCCc-------ccc---cchhh-----HHhHHHHHhhhhcc----
Q 009524          106 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTK-------NEL---YSNSL-----RIYNEVEFEGMDGY----  166 (532)
Q Consensus       106 ~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~-------nd~---~~~~~-----~~~~~~~~~g~d~~----  166 (532)
                      .++ +|++|.+++..|.+++    .+.|..+....+.+.       ...   +....     ..............    
T Consensus       118 ~~~-~p~~l~~l~~~~~~~~----~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (328)
T d1xhba2         118 CEC-TAGWLEPLLARIKHDR----RTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPV  192 (328)
T ss_dssp             EEE-CTTCHHHHHHHHHHCT----TEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCE
T ss_pred             ccc-ChhHHHHHHHHHhcCC----CeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhcccccccccc
Confidence            999 7999999999988653    233332222221110       000   00000     00011111111111    


Q ss_pred             CCceeecccceeehHhhccCCCChhhHHHhhhccchhhhhhHHHHHHhhhhcccccccccCccccccccCCCCC---CCh
Q 009524          167 GGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP---VED  243 (532)
Q Consensus       167 ~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~v~~c~ye~~t~wG~~~G~~~~sv---tED  243 (532)
                      ..+..+|+++++||+++.+              +|                                ||+++-.   .||
T Consensus       193 ~~~~~~g~~~~irr~~f~~--------------vG--------------------------------gfDe~~~~~g~ED  226 (328)
T d1xhba2         193 RTPTMAGGLFSIDRDYFQE--------------IG--------------------------------TYDAGMDIWGGEN  226 (328)
T ss_dssp             ECSBCCSSSEEEEHHHHHH--------------TT--------------------------------SCCTTSCTTCCCC
T ss_pred             ccceecceeeeeeHHHHHH--------------hC--------------------------------CCCCCCcCcCchH
Confidence            1234678888999999998              66                                5554332   499


Q ss_pred             HHHHHHHHHcCCEEEEec
Q 009524          244 VITGISIQCQGWKSVYCK  261 (532)
Q Consensus       244 ~~t~~~l~~~Gwrs~y~~  261 (532)
                      +++++|+..+||++.|+.
T Consensus       227 ~Dl~~R~~~~G~~i~~~p  244 (328)
T d1xhba2         227 LEISFRIWQCGGTLEIVT  244 (328)
T ss_dssp             SHHHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHHHhCCeEEEeC
Confidence            999999999999999983
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure