Citrus Sinensis ID: 009593

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-
MNRISLTIYLAVFWLLTESSGAETVMFSTKLIHRFSEEVKALGVSKNRNATSWPAKKSFEYYQVLLSSDVQKQKMKTGPQFQMLFPSQGSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTASTQLISSRSSSLKVLPFLLLLRLLVSAS
cccHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccccccccHHHHHHHHcccHHHHHHHcccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEEEEEEEEEccccccccccccccEEEEccccccccccccccccEEEEcccccccHHHHHHHcccccccEEEEcccccccEEEEccccccccEEEEccccccccccEEEEEEEEEEccEEEccccccEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccEEccccccccccEEEEEEccccEEEEccccEEEEEcccccEEEEEEEcccccEEEEccEEEccEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcc
ccHHHHHHHHHHHHHHHHHHccccccEcEEEEEcccHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHccccccccccccccccccHcccccEEEEEEEEccccEEEEEEEEcccccEEEEccccccccccHHHHcccccccccccccccccEEEcccccHHccccccccccccccEEEEEEEccccccEEEEEEEEEEEcccccccccccEcccEEEEEEEccccHHEEEcccccccccccccccHHHHHHHccccccEEEEEEccccccEEEEccccccHcccccEEccccccEEEEEEEEEEEEccEEEEccccEEEEEccccEEEcccHHHHHHHHHHHHHHcccccccccccccEEEEEccccccccccEEEEEEcccEEEcccccEEEEEccccEEEEEEcccccccEEEEcHHHEccEEEEEEccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcc
MNRISLTIYLAVFWLLtessgaetvMFSTKLIHRFSEEVKALgvsknrnatswpakkSFEYYQVLLSSDvqkqkmktgpqfqmlfpsqgsktmslgndfgwlhytwidigtpnVSFLVALdagsdllwipcdcvrcaplsasyYNSLdrdlneyspsasstskhlscshrlcdlgtscqnpkqpcpytmdyytentsssgllVEDILHLISGGDNALKNSVQASVIIGCgmkqsggyldgvapdgliglglgeisvPSLLAKAGlirnsfsmcfdkddsgriffgdqgpatqqSTSFLASNGKYITYIIGVETccigssclkqtSFKAIvdsgssftflpkEVYETIAAEFDRQvndtitsfegypwkccyksssqrlpklpsvklmfpqnnsfvvnnpVFVIYGTQVVTGFClaiqpvdgdigtigqnfmtgyrvvfdrenlklgwshsncqdlndgtkspltpgpgtpsnplpanqeqsspgghavgpavagrapskpstastqlissrssslkvlPFLLLLRLLVSAS
MNRISLTIYLAVFWLLTESSGAETVMFSTKLIHRFSEEVkalgvsknrnatswpakKSFEYYQVLLSSDVQKQKMKTGPQFQMLFPSQGSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTastqlissrssslkvlpfLLLLRLLVSAS
MNRISLTIYLAVFWLLTESSGAETVMFSTKLIHRFSEEVKALGVSKNRNATSWPAKKSFEYYQVLLSSDVQKQKMKTGPQFQMLFPSQGSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMfpqnnsfvvnnpvfvIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSpgghavgpavagrapSKPstastqlissrssslkvlpfllllrllvsas
***ISLTIYLAVFWLLTESSGAETVMFSTKLIHRFSEEVKALGVSKNRNATSWPAKKSFEYYQVLLS**************************SLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLD******************CSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQG*****STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN***************************************************************LKVLPFLLLLRLLV***
**RISLTIYLAVFWLLTESSGAETVMFSTKLIHRFSE***********************************************************NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS****************CPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVND*****EGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNC*********************************************************SRSSSLKVLPFLLLLRLLVSAS
MNRISLTIYLAVFWLLTESSGAETVMFSTKLIHRFSEEVKALGVSKNRNATSWPAKKSFEYYQVLLSSDVQKQKMKTGPQFQMLFPSQGSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLN**************CSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPS****************************************SSSLKVLPFLLLLRLLVSAS
*NRISLTIYLAVFWLLTESSGAETVMFSTKLIHRFSEEVKALGVSKNRNATSWPAKKSFEYYQVLLSSDVQKQKMKTGPQFQMLFPSQGSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDL**************************************************QLISSRSSSLKVLPFLLLLRLLVSAS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNRISLTIYLAVFWLLTESSGAETVMFSTKLIHRFSEEVKALGVSKNRNATSWPAKKSFEYYQVLLSSDVQKQKMKTGPQFQMLFPSQGSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGHAVGPAVAGRAPSKPSTASTQLISSRSSSLKVLPFLLLLRLLVSAS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query531 2.2.26 [Sep-21-2011]
Q9LX20528 Aspartic proteinase-like yes no 0.902 0.907 0.587 1e-167
Q9S9K4475 Aspartic proteinase-like no no 0.632 0.707 0.281 8e-23
Q766C2438 Aspartic proteinase nepen N/A no 0.632 0.767 0.244 9e-14
Q0IU52410 Aspartic proteinase Asp1 no no 0.612 0.792 0.237 5e-12
Q6XBF8437 Aspartic proteinase CDR1 no no 0.578 0.702 0.251 9e-12
Q766C3437 Aspartic proteinase nepen N/A no 0.728 0.885 0.225 1e-11
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.621 0.804 0.234 1e-11
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.606 0.644 0.247 2e-11
P32329569 Aspartic proteinase 3 OS= yes no 0.668 0.623 0.255 3e-09
P18242410 Cathepsin D OS=Mus muscul yes no 0.589 0.763 0.242 3e-08
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function desciption
 Score =  589 bits (1519), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 290/494 (58%), Positives = 375/494 (75%), Gaps = 15/494 (3%)

Query: 8   IYLAVFWLLTESSGAETVMFSTKLIHRFSEEVKALGVSKNRNATSWPAKKSFEYYQVLLS 67
           +   V +L TE + A   +FS++LIHRFS+E +A  +    ++ S P K+S EYY++L  
Sbjct: 8   LLFCVLFLATEETLAS--LFSSRLIHRFSDEGRA-SIKTPSSSDSLPNKQSLEYYRLLAE 64

Query: 68  SDVQKQKMKTGPQFQMLFPSQGSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLL 127
           SD ++Q+M  G + Q L PS+GSKT+S GNDFGWLHYTWIDIGTP+VSFLVALD GS+LL
Sbjct: 65  SDFRRQRMNLGAKVQSLVPSEGSKTISSGNDFGWLHYTWIDIGTPSVSFLVALDTGSNLL 124

Query: 128 WIPCDCVRCAPLSASYYNSL-DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCP 186
           WIPC+CV+CAPL+++YY+SL  +DLNEY+PS+SSTSK   CSH+LCD  + C++PK+ CP
Sbjct: 125 WIPCNCVQCAPLTSTYYSSLATKDLNEYNPSSSSTSKVFLCSHKLCDSASDCESPKEQCP 184

Query: 187 YTMDYYTENTSSSGLLVEDILHLISGGDNALKN---SVQASVIIGCGMKQSGGYLDGVAP 243
           YT++Y + NTSSSGLLVEDILHL    +N L N   SV+A V+IGCG KQSG YLDGVAP
Sbjct: 185 YTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVKARVVIGCGKKQSGDYLDGVAP 244

Query: 244 DGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLA-SNG 302
           DGL+GLG  EISVPS L+KAGL+RNSFS+CFD++DSGRI+FGD GP+ QQST FL   N 
Sbjct: 245 DGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSIQQSTPFLQLDNN 304

Query: 303 KYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSF 362
           KY  YI+GVE CCIG+SCLKQTSF   +DSG SFT+LP+E+Y  +A E DR +N T  +F
Sbjct: 305 KYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKVALEIDRHINATSKNF 364

Query: 363 EGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGD 422
           EG  W+ CY+SS++  PK+P++KL F  NN+FV++ P+FV   +Q +  FCL I P   +
Sbjct: 365 EGVSWEYCYESSAE--PKVPAIKLKFSHNNTFVIHKPLFVFQQSQGLVQFCLPISPSGQE 422

Query: 423 -IGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSP-LTPGPGTPSNPLPANQEQ 480
            IG+IGQN+M GYR+VFDREN+KLGWS S CQ+  D  + P  +PG  +  NPLP +++Q
Sbjct: 423 GIGSIGQNYMRGYRMVFDRENMKLGWSPSKCQE--DKIEPPQASPGSTSSPNPLPTDEQQ 480

Query: 481 SSPGGHAVGPAVAG 494
           S  GGHAV PA+AG
Sbjct: 481 SR-GGHAVSPAIAG 493

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|P32329|YPS1_YEAST Aspartic proteinase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPS1 PE=1 SV=2 Back     alignment and function description
>sp|P18242|CATD_MOUSE Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query531
255576176542 Aspartic proteinase nepenthesin-1 precur 0.947 0.928 0.754 0.0
224083757492 predicted protein [Populus trichocarpa] 0.896 0.967 0.741 0.0
296082464530 unnamed protein product [Vitis vinifera] 0.945 0.947 0.702 0.0
225438629511 PREDICTED: aspartic proteinase-like prot 0.919 0.954 0.713 0.0
449451627532 PREDICTED: aspartic proteinase-like prot 0.939 0.937 0.680 0.0
356538031521 PREDICTED: aspartic proteinase-like prot 0.900 0.917 0.680 0.0
356567798520 PREDICTED: aspartic proteinase-like prot 0.898 0.917 0.678 0.0
359492825531 PREDICTED: aspartic proteinase-like prot 0.937 0.937 0.625 0.0
302141912521 unnamed protein product [Vitis vinifera] 0.911 0.928 0.637 0.0
357463449529 Aspartic proteinase-like protein [Medica 0.894 0.897 0.663 0.0
>gi|255576176|ref|XP_002528982.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223531572|gb|EEF33401.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/505 (75%), Positives = 436/505 (86%), Gaps = 2/505 (0%)

Query: 8   IYLAVFWLLTESSGAETVMFSTKLIHRFSEEVKALGVS-KNRNATSWPAKKSFEYYQVLL 66
           +++ V   L     AE V FS++LIHRFS+EVKAL VS K+  + SWP KKS +YYQ+L+
Sbjct: 18  LFILVMASLLIDKSAE-VTFSSRLIHRFSDEVKALRVSRKDSLSYSWPEKKSMDYYQILV 76

Query: 67  SSDVQKQKMKTGPQFQMLFPSQGSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDL 126
           +SD Q+QKMK GPQ+Q LFPSQGSKTMSLG+DFGWLHYTWIDIGTP+VSFLVALDAGSDL
Sbjct: 77  NSDFQRQKMKLGPQYQFLFPSQGSKTMSLGDDFGWLHYTWIDIGTPHVSFLVALDAGSDL 136

Query: 127 LWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCP 186
           LW+PCDC++CAPLSASYY+SLDRDLNEYSPS SSTSKHLSCSH+LC+LG +C +PKQPCP
Sbjct: 137 LWVPCDCLQCAPLSASYYSSLDRDLNEYSPSHSSTSKHLSCSHQLCELGPNCNSPKQPCP 196

Query: 187 YTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGL 246
           Y+MDYYTENTSSSGLLVEDILHL S GDNAL  SV+A V+IGCGMKQSGGYLDGVAPDGL
Sbjct: 197 YSMDYYTENTSSSGLLVEDILHLASNGDNALSYSVRAPVVIGCGMKQSGGYLDGVAPDGL 256

Query: 247 IGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLASNGKYIT 306
           +GLGL EISVPS LAKAGLIRNSFSMCFD+DDSGRIFFGDQGP TQQST FL  +G Y T
Sbjct: 257 MGLGLAEISVPSFLAKAGLIRNSFSMCFDEDDSGRIFFGDQGPTTQQSTPFLTLDGNYTT 316

Query: 307 YIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYP 366
           Y++GVE  C+GSSCLKQTSF+A+VD+G+SFTFLP  VYE I  EFDRQVN TI+SF GYP
Sbjct: 317 YVVGVEGFCVGSSCLKQTSFRALVDTGTSFTFLPNGVYERITEEFDRQVNATISSFNGYP 376

Query: 367 WKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTI 426
           WK CYKSSS  L K+PSVKL+FP NNSFV++NPVF+IYG Q +TGFCLAIQP +GDIGTI
Sbjct: 377 WKYCYKSSSNHLTKVPSVKLIFPLNNSFVIHNPVFMIYGIQGITGFCLAIQPTEGDIGTI 436

Query: 427 GQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPGPGTPSNPLPANQEQSSPGGH 486
           GQNFM GYRVVFDREN+KLGWSHS+C+D ++  + PLT   GT  NPLP N++QSSPGGH
Sbjct: 437 GQNFMAGYRVVFDRENMKLGWSHSSCEDRSNDKRMPLTSPNGTLVNPLPTNEQQSSPGGH 496

Query: 487 AVGPAVAGRAPSKPSTASTQLISSR 511
           AV PAVAGRAPSKPS A+ QL+ SR
Sbjct: 497 AVSPAVAGRAPSKPSAAAVQLLPSR 521

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224083757|ref|XP_002307112.1| predicted protein [Populus trichocarpa] gi|222856561|gb|EEE94108.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296082464|emb|CBI21469.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225438629|ref|XP_002281243.1| PREDICTED: aspartic proteinase-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449451627|ref|XP_004143563.1| PREDICTED: aspartic proteinase-like protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356538031|ref|XP_003537508.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356567798|ref|XP_003552102.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|359492825|ref|XP_002284255.2| PREDICTED: aspartic proteinase-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302141912|emb|CBI19115.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357463449|ref|XP_003602006.1| Aspartic proteinase-like protein [Medicago truncatula] gi|355491054|gb|AES72257.1| Aspartic proteinase-like protein [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query531
TAIR|locus:2184138528 AT5G10080 [Arabidopsis thalian 0.885 0.890 0.566 1.9e-145
TAIR|locus:2125324524 AT4G35880 [Arabidopsis thalian 0.830 0.841 0.379 4.8e-78
TAIR|locus:2827921513 AT2G17760 [Arabidopsis thalian 0.813 0.842 0.408 3.4e-77
TAIR|locus:2080903529 AT3G51330 [Arabidopsis thalian 0.849 0.852 0.364 4e-67
TAIR|locus:2080908530 AT3G51340 [Arabidopsis thalian 0.856 0.858 0.345 5e-60
TAIR|locus:2080973488 AT3G51360 [Arabidopsis thalian 0.815 0.887 0.336 4e-58
TAIR|locus:2080913528 AT3G51350 [Arabidopsis thalian 0.828 0.833 0.335 1.4e-57
TAIR|locus:2075512488 AT3G02740 [Arabidopsis thalian 0.630 0.686 0.295 3.7e-32
TAIR|locus:2198753485 AT1G05840 [Arabidopsis thalian 0.468 0.513 0.305 6.3e-25
TAIR|locus:2183617482 AT5G36260 [Arabidopsis thalian 0.645 0.711 0.267 1.2e-23
TAIR|locus:2184138 AT5G10080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
 Identities = 274/484 (56%), Positives = 354/484 (73%)

Query:     5 SLTIYLAVFWLLTESSGAETVMFSTKLIHRFSEEVKALGVSKNRNATSWPAKKSFEYYQV 64
             S  +   V +L TE + A   +FS++LIHRFS+E +A  +    ++ S P K+S EYY++
Sbjct:     5 SAFLLFCVLFLATEETLAS--LFSSRLIHRFSDEGRA-SIKTPSSSDSLPNKQSLEYYRL 61

Query:    65 LLSSDVQKQKMKTGPQFQMLFPSQGSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGS 124
             L  SD ++Q+M  G + Q L PS+GSKT+S GNDFGWLHYTWIDIGTP+VSFLVALD GS
Sbjct:    62 LAESDFRRQRMNLGAKVQSLVPSEGSKTISSGNDFGWLHYTWIDIGTPSVSFLVALDTGS 121

Query:   125 DLLWIPCDCVRCAPLSASYYNSL-DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQ 183
             +LLWIPC+CV+CAPL+++YY+SL  +DLNEY+PS+SSTSK   CSH+LCD  + C++PK+
Sbjct:   122 NLLWIPCNCVQCAPLTSTYYSSLATKDLNEYNPSSSSTSKVFLCSHKLCDSASDCESPKE 181

Query:   184 PCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKN---SVQASVIIGCGMKQSGGYLDG 240
              CPYT++Y + NTSSSGLLVEDILHL    +N L N   SV+A V+IGCG KQSG YLDG
Sbjct:   182 QCPYTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVKARVVIGCGKKQSGDYLDG 241

Query:   241 VAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQQSTSFLA- 299
             VAPDGL+GLG  EISVPS L+KAGL+RNSFS+CFD++DSGRI+FGD GP+ QQST FL  
Sbjct:   242 VAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGDMGPSIQQSTPFLQL 301

Query:   300 SNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTI 359
              N KY  YI+GVE CCIG+SCLKQTSF   +DSG SFT+LP+E+Y  +A E DR +N T 
Sbjct:   302 DNNKYSGYIVGVEACCIGNSCLKQTSFTTFIDSGQSFTYLPEEIYRKVALEIDRHINATS 361

Query:   360 TSFEGYPWKCCYKSSSQRLPKLPSVKLMXXXXXXXXXXXXXXXIYGTQVVTGFCLAIQPV 419
              +FEG  W+ CY+SS++  PK+P++KL                   +Q +  FCL I P 
Sbjct:   362 KNFEGVSWEYCYESSAE--PKVPAIKLKFSHNNTFVIHKPLFVFQQSQGLVQFCLPISPS 419

Query:   420 DGD-IGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSP-LTPGPGTPSNPLPAN 477
               + IG+IGQN+M GYR+VFDREN+KLGWS S CQ+  D  + P  +PG  +  NPLP +
Sbjct:   420 GQEGIGSIGQNYMRGYRMVFDRENMKLGWSPSKCQE--DKIEPPQASPGSTSSPNPLPTD 477

Query:   478 QEQS 481
             ++QS
Sbjct:   478 EQQS 481
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0031225 "anchored to membrane" evidence=TAS
GO:0046658 "anchored to plasma membrane" evidence=IDA
TAIR|locus:2125324 AT4G35880 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827921 AT2G17760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080903 AT3G51330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080908 AT3G51340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080973 AT3G51360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080913 AT3G51350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198753 AT1G05840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183617 AT5G36260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LX20ASPL1_ARATH3, ., 4, ., 2, 3, ., -0.58700.90200.9071yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.V.2960.1
hypothetical protein (492 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query531
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-30
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 5e-30
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 5e-26
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 2e-22
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 2e-19
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 3e-19
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 4e-17
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 3e-10
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 2e-08
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 2e-07
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 6e-07
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 6e-07
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 1e-06
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 7e-06
cd05487326 cd05487, renin_like, Renin stimulates production o 2e-05
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 2e-04
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 3e-04
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 3e-04
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  119 bits (301), Expect = 1e-30
 Identities = 79/362 (21%), Positives = 112/362 (30%), Gaps = 122/362 (33%)

Query: 109 IGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168
           IGTP   F + +D GSDL W  C                                     
Sbjct: 8   IGTPPQPFSLIVDTGSDLTWTQC------------------------------------- 30

Query: 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 228
                           C Y    Y + +S+SG+L  +      G  +        +V  G
Sbjct: 31  ----------------CSYEY-SYGDGSSTSGVLATETFTF--GDSSVSV----PNVAFG 67

Query: 229 CGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCF----DKDDSGRIFF 284
           CG    GG   G   DG++GLG G +S+ S L   G   N FS C     D   S  +  
Sbjct: 68  CGTDNEGGSFGG--ADGILGLGRGPLSLVSQLGSTG---NKFSYCLVPHDDTGGSSPLIL 122

Query: 285 GD---QGPATQQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKA----------IVD 331
           GD    G +    T  + +      Y + +E   +G   L                 I+D
Sbjct: 123 GDAADLGGSGVVYTPLVKNPANPTYYYVNLEGISVGGKRLPIPPSVFAIDSDGSGGTIID 182

Query: 332 SGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQN 391
           SG++ T+LP   Y  +   FD                                 L  P  
Sbjct: 183 SGTTLTYLPDPAYPDLTLHFD-----------------------------GGADLELPPE 213

Query: 392 NSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNF-MTGYRVVFDRENLKLGWSHS 450
           N FV                 CLAI        +I  N     + V +D EN +LG++ +
Sbjct: 214 NYFVDVGE----------GVVCLAILSSSSGGVSILGNIQQQNFLVEYDLENSRLGFAPA 263

Query: 451 NC 452
           +C
Sbjct: 264 DC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 531
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.92
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.88
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.61
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 95.24
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.15
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 94.81
PF1365090 Asp_protease_2: Aspartyl protease 94.53
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 93.52
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.48
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 92.64
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 90.95
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 85.69
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 83.51
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 81.48
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 80.53
PF1365090 Asp_protease_2: Aspartyl protease 80.14
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.5e-65  Score=540.33  Aligned_cols=397  Identities=24%  Similarity=0.405  Sum_probs=307.1

Q ss_pred             HhhcccccccccceEEEEeecChhhhhcccCCCCCCCCCCCCCcHHHHHHHhcchHhhhhhhcCCCccccccCCCCceee
Q 009593           15 LLTESSGAETVMFSTKLIHRFSEEVKALGVSKNRNATSWPAKKSFEYYQVLLSSDVQKQKMKTGPQFQMLFPSQGSKTMS   94 (531)
Q Consensus        15 ~~~~~~~~~~~~~~~~l~hr~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (531)
                      +.++...+...+++++|+||+++++|++.          +.....+.++++++++++|++.......   ..    ..+.
T Consensus        13 ~~~~~~~~~~~~~~~~l~h~~~~~sp~~~----------~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~----~~~~   75 (431)
T PLN03146         13 SELSAAEAPKGGFTVDLIHRDSPKSPFYN----------PSETPSQRLRNAFRRSISRVNHFRPTDA---SP----NDPQ   75 (431)
T ss_pred             hhhhhccccCCceEEEEEeCCCCCCCCCC----------CCCChhHHHHHHHHHHHHHHHHHhhccc---cC----Cccc
Confidence            33443355778899999999999998754          2222345666777777666544322111   00    0111


Q ss_pred             cC-CCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCC
Q 009593           95 LG-NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLC  172 (531)
Q Consensus        95 l~-~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C  172 (531)
                      .+ ...+..|+++|.||||||++.|++||||+++||+|. |..|..+.          .+.|||++|+||+.++|+++.|
T Consensus        76 ~~~~~~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~----------~~~fdps~SST~~~~~C~s~~C  145 (431)
T PLN03146         76 SDLISNGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQV----------SPLFDPKKSSTYKDVSCDSSQC  145 (431)
T ss_pred             cCcccCCccEEEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCC----------CCcccCCCCCCCcccCCCCccc
Confidence            11 122568999999999999999999999999999997 88887543          3799999999999999999999


Q ss_pred             CCCC---CCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeec
Q 009593          173 DLGT---SCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGL  249 (531)
Q Consensus       173 ~~~~---~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGL  249 (531)
                      +...   .|..+ +.|.|.+.|+|| +.+.|.+++|+|+|++..+..   ...+++.|||++.+.|.|..  ..+|||||
T Consensus       146 ~~~~~~~~c~~~-~~c~y~i~Ygdg-s~~~G~l~~Dtltlg~~~~~~---~~v~~~~FGc~~~~~g~f~~--~~~GilGL  218 (431)
T PLN03146        146 QALGNQASCSDE-NTCTYSYSYGDG-SFTKGNLAVETLTIGSTSGRP---VSFPGIVFGCGHNNGGTFDE--KGSGIVGL  218 (431)
T ss_pred             ccCCCCCCCCCC-CCCeeEEEeCCC-CceeeEEEEEEEEeccCCCCc---ceeCCEEEeCCCCCCCCccC--CCceeEec
Confidence            8642   37554 469999999997 678999999999998753211   35679999999988876532  46899999


Q ss_pred             CCCCCChHHHHHhcCCCCCcEEEeeecC-----CCCcEEECCCCCCC---CeeeeeeecCCCceeEEEEeeEEEeCCeEe
Q 009593          250 GLGEISVPSLLAKAGLIRNSFSMCFDKD-----DSGRIFFGDQGPAT---QQSTSFLASNGKYITYIIGVETCCIGSSCL  321 (531)
Q Consensus       250 G~~~~S~~~~L~~~g~i~~~FS~~L~~~-----~~G~l~fGg~d~~~---~~~~~~v~~~~~~~~y~V~l~~i~Vgg~~~  321 (531)
                      |++.+|+++||...  +.++|||||.+.     ..|.|+||+.....   ..++|+++... ..+|.|+|++|+||++.+
T Consensus       219 G~~~~Sl~sql~~~--~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~-~~~y~V~L~gIsVgg~~l  295 (431)
T PLN03146        219 GGGPLSLISQLGSS--IGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDP-DTFYYLTLEAISVGSKKL  295 (431)
T ss_pred             CCCCccHHHHhhHh--hCCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCC-CCeEEEeEEEEEECCEEC
Confidence            99999999998753  557999999641     36999999853221   23566664433 379999999999999987


Q ss_pred             ecCc--------ceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcE
Q 009593          322 KQTS--------FKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNS  393 (531)
Q Consensus       322 ~~~~--------~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~  393 (531)
                      ....        ..+||||||++++||+++|++|+++|.++++..+.......++.||.....  ..+|+|+|+| +|.+
T Consensus       296 ~~~~~~~~~~~~g~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~--~~~P~i~~~F-~Ga~  372 (431)
T PLN03146        296 PYTGSSKNGVEEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTSD--IKLPIITAHF-TGAD  372 (431)
T ss_pred             cCCccccccCCCCcEEEeCCccceecCHHHHHHHHHHHHHHhccccCCCCCCCCCccccCCCC--CCCCeEEEEE-CCCe
Confidence            6322        369999999999999999999999999998765433333456789975432  4789999999 5889


Q ss_pred             EEEcCCeEEEEeccccceEEEEEEecCCCceeeCccceeceEEEEeCCCCEEEEeeCCCCC
Q 009593          394 FVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQD  454 (531)
Q Consensus       394 ~~i~~~~y~~~~~~~~~~~Cl~i~~~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~~C~~  454 (531)
                      +.|++++|++...+  +.+|+++.... +.||||+.|||++|+|||++++||||++.+|++
T Consensus       373 ~~l~~~~~~~~~~~--~~~Cl~~~~~~-~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~  430 (431)
T PLN03146        373 VKLQPLNTFVKVSE--DLVCFAMIPTS-SIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK  430 (431)
T ss_pred             eecCcceeEEEcCC--CcEEEEEecCC-CceEECeeeEeeEEEEEECCCCEEeeecCCcCc
Confidence            99999999987654  56899988764 469999999999999999999999999999975

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query531
1eag_A342 Secreted Aspartic Proteinase (Sap2) From Candida Al 9e-07
1zap_A342 Secreted Aspartic Protease From C. Albicans Length 1e-06
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 1e-05
3vla_A413 Crystal Structure Of Edgp Length = 413 1e-05
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 2e-04
1smr_A335 The 3-D Structure Of Mouse Submaxillary Renin Compl 2e-04
1dp5_A329 The Structure Of Proteinase A Complexed With A Ia3 3e-04
2x0b_A383 Crystal Structure Of Human Angiotensinogen Complexe 3e-04
3vcm_A335 Crystal Structure Of Human Prorenin Length = 335 3e-04
2jxr_A329 Structure Of Yeast Proteinase A Length = 329 3e-04
3d91_A341 Human Renin In Complex With Remikiren Length = 341 9e-04
>pdb|1EAG|A Chain A, Secreted Aspartic Proteinase (Sap2) From Candida Albicans Complexed With A70450 Length = 342 Back     alignment and structure 
Iteration: 1

 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 116/279 (41%), Gaps = 56/279 (20%)
Query: 107 IDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLS 166
           I +G+ N    V +D GS  LW+P   V C    +       +    Y PS SS S+ L+
Sbjct: 18  ITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN 77
Query: 167 CSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASV- 225
              ++                    Y + +SS G L +D +     G  ++KN V A V 
Sbjct: 78  TPFKIG-------------------YGDGSSSQGTLYKDTVGF---GGVSIKNQVLADVD 115
Query: 226 -------IIGCGMK--QSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLI-RNSFSMCFD 275
                  I+G G K  ++GG  D               +VP  L K G+I +N++S+  +
Sbjct: 116 STSIDQGILGVGYKTNEAGGSYD---------------NVPVTLKKQGVIAKNAYSLYLN 160
Query: 276 KDDS--GRIFFGDQGPATQQSTSFLA---SNGKYITYIIGVETCCIGSSCLKQTSFKAIV 330
             D+  G+I FG    A + S S +A   ++ + +   +G  +  +    +   +   ++
Sbjct: 161 SPDAATGQIIFGGVDNA-KYSGSLIALPVTSDRELRISLG--SVEVSGKTINTDNVDVLL 217
Query: 331 DSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKC 369
           DSG++ T+L +++ + I   F+ ++         Y   C
Sbjct: 218 DSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEVDC 256
>pdb|1ZAP|A Chain A, Secreted Aspartic Protease From C. Albicans Length = 342 Back     alignment and structure
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure
>pdb|1SMR|A Chain A, The 3-D Structure Of Mouse Submaxillary Renin Complexed With A Decapeptide Inhibitor Ch-66 Based On The 4-16 Fragment Of Rat Angiotensinogen Length = 335 Back     alignment and structure
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 Back     alignment and structure
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With Renin Length = 383 Back     alignment and structure
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin Length = 335 Back     alignment and structure
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 Back     alignment and structure
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren Length = 341 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query531
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 4e-67
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 1e-57
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 5e-57
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 7e-28
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 2e-26
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 3e-26
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 2e-25
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 1e-24
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 1e-23
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 3e-22
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-21
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 4e-21
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 1e-20
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 2e-19
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 3e-19
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 4e-19
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 7e-19
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 8e-19
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 1e-18
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-18
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 2e-18
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 3e-18
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 3e-18
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 3e-18
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 6e-18
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 1e-17
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 2e-17
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 5e-17
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 3e-16
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 1e-14
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 5e-13
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 1e-05
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 5e-13
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 2e-11
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 8e-08
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  221 bits (564), Expect = 4e-67
 Identities = 69/380 (18%), Positives = 125/380 (32%), Gaps = 43/380 (11%)

Query: 102 LHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASS 160
           LH+  +   TP +   V +D   + LW+ C+         A + +           +  S
Sbjct: 22  LHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH----------STQCS 71

Query: 161 TSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNS 220
            +    C          C      C           +  G L ED+L + +   +  +  
Sbjct: 72  RANTHQCLSCPAASRPGCHKNT--CGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLG 129

Query: 221 VQASV---IIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKD 277
              +V   +  C               G+ GLG   IS+P+ LA    ++  F+ C  + 
Sbjct: 130 PLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRY 189

Query: 278 DS--GRIFFGDQGPATQQSTSFLASNGKYIT---------YIIGVETCCIG--------- 317
            +  G I FGD     +Q  +    +    T         Y + V +  I          
Sbjct: 190 PTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNK 249

Query: 318 --SSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSS 375
             S+ +  TS   ++ + +    L + VY+     F +Q+          P+  C+ S+ 
Sbjct: 250 ISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNK 309

Query: 376 QRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGT---IGQNFMT 432
             +   PSV L+  + N  V       +         CL +            +G   + 
Sbjct: 310 --INAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLE 367

Query: 433 GYRVVFDRENLKLGWSHSNC 452
              VVFD    ++G+S S+ 
Sbjct: 368 ENLVVFDLARSRVGFSTSSL 387
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query531
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.87
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.65
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 94.81
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 93.98
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 82.04
2hs1_A99 HIV-1 protease; ultra-high resolution active site 81.86
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=7.4e-58  Score=479.90  Aligned_cols=327  Identities=22%  Similarity=0.372  Sum_probs=260.4

Q ss_pred             CCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecCCCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCCCCCCC-
Q 009593           97 NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLG-  175 (531)
Q Consensus        97 ~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~~C~~~-  175 (531)
                      +..+.+||++|.||||||+|.|++||||+++||+|.  .|                    .+|+||+.++|.+..|... 
T Consensus        16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~--~c--------------------~~Sst~~~v~C~s~~C~~~~   73 (413)
T 3vla_A           16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD--QN--------------------YVSSTYRPVRCRTSQCSLSG   73 (413)
T ss_dssp             CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--SS--------------------CCCTTCEECBTTSHHHHHTT
T ss_pred             cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC--CC--------------------CCCCCcCccCCCcccccccc
Confidence            344678999999999999999999999999999993  33                    2599999999999999753 


Q ss_pred             -CCC---CC------CCCCCceEEecC-CCCceeeEEEEEEEEEEecCCCCcc-ccccccceEEEEEEeccCCCCCCCCC
Q 009593          176 -TSC---QN------PKQPCPYTMDYY-TENTSSSGLLVEDILHLISGGDNAL-KNSVQASVIIGCGMKQSGGYLDGVAP  243 (531)
Q Consensus       176 -~~C---~~------~~~~c~~~i~Y~-~g~s~~~G~~~~D~v~lg~~~~~~~-~~~~~~~~~fG~~~~~~g~~~~~~~~  243 (531)
                       ..|   .+      .++.|.|.+.|+ ++ +.+.|++++|+|+|+..++... ....+.++.|||++++.+... ...+
T Consensus        74 ~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~-~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~-~~~~  151 (413)
T 3vla_A           74 SIACGDCFNGPRPGCNNNTCGVFPENPVIN-TATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL-ASGV  151 (413)
T ss_dssp             CCEEECCSSCCBTTBCSSEEEECCEETTTT-EECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS-CTTC
T ss_pred             cCCCcccccCCCCCCCCCcCcceeecCcCC-ceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc-cccc
Confidence             122   21      124699999994 75 6899999999999986433210 013567899999998743221 2367


Q ss_pred             CeeeecCCCCCChHHHHHhcCCCCCcEEEeeecC--CCCcEEECCCCCCC----------CeeeeeeecCCC--------
Q 009593          244 DGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKD--DSGRIFFGDQGPAT----------QQSTSFLASNGK--------  303 (531)
Q Consensus       244 dGIlGLG~~~~S~~~~L~~~g~i~~~FS~~L~~~--~~G~l~fGg~d~~~----------~~~~~~v~~~~~--------  303 (531)
                      |||||||++.+|++.||+++++++++|||||.+.  .+|.|+||+.|...          ..++|++..+..        
T Consensus       152 dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~  231 (413)
T 3vla_A          152 VGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQG  231 (413)
T ss_dssp             CEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTT
T ss_pred             ccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccccc
Confidence            9999999999999999999988899999999873  57999999998632          335555443211        


Q ss_pred             --ceeEEEEeeEEEeCCeEeecC----------cceEEEecCccceeccHHHHHHHHHHHHhhccC---cccccCCCCce
Q 009593          304 --YITYIIGVETCCIGSSCLKQT----------SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVND---TITSFEGYPWK  368 (531)
Q Consensus       304 --~~~y~V~l~~i~Vgg~~~~~~----------~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~---~~~~~~~~~~~  368 (531)
                        ..+|+|+|++|.||++.+...          ..++||||||++++||+++|++|+++|.+++..   .+. .....++
T Consensus       232 ~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~-~~~~~~~  310 (413)
T 3vla_A          232 EPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRV-ASVAPFG  310 (413)
T ss_dssp             CCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEE-CCCTTCS
T ss_pred             CCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcC-CCCCCCc
Confidence              269999999999999988632          367999999999999999999999999988742   222 1234578


Q ss_pred             eeeecCCCC----CCCCCeEEEEecC-CcEEEEcCCeEEEEeccccceEEEEEEecCC---CceeeCccceeceEEEEeC
Q 009593          369 CCYKSSSQR----LPKLPSVKLMFPQ-NNSFVVNNPVFVIYGTQVVTGFCLAIQPVDG---DIGTIGQNFMTGYRVVFDR  440 (531)
Q Consensus       369 ~Cy~~~~~~----~~~~P~itf~f~g-g~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~~---~~~ILG~~fl~~~yvvFD~  440 (531)
                      .||..++..    +..+|+|+|+|+| +++|+|++++|+++..+  +.+|++++..+.   +.||||+.||+++|+|||+
T Consensus       311 ~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~  388 (413)
T 3vla_A          311 ACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDL  388 (413)
T ss_dssp             CEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSSSEEECHHHHTTEEEEEET
T ss_pred             ceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCcccceeEehhhhcCeEEEEEC
Confidence            999987642    2479999999965 48999999999998654  678999887642   5799999999999999999


Q ss_pred             CCCEEEEeeC
Q 009593          441 ENLKLGWSHS  450 (531)
Q Consensus       441 e~~riGfa~~  450 (531)
                      +|+|||||++
T Consensus       389 ~~~riGfa~~  398 (413)
T 3vla_A          389 ATSRVGFSGT  398 (413)
T ss_dssp             TTTEEEEEEE
T ss_pred             CCCEEEEEEe
Confidence            9999999996
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 531
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 2e-39
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 1e-30
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 1e-30
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 6e-30
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 6e-30
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 8e-30
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 3e-29
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 6e-29
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 3e-28
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 7e-28
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-27
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 4e-27
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 5e-27
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-26
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 8e-26
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 8e-26
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 1e-25
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 2e-25
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 2e-22
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 9e-22
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 4e-20
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 8e-18
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  145 bits (366), Expect = 2e-39
 Identities = 57/387 (14%), Positives = 115/387 (29%), Gaps = 53/387 (13%)

Query: 102 LHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASS 160
           L+      G       + LD    L+W  CD     A +            +  +   ++
Sbjct: 15  LYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIP----------CSSPTCLLAN 59

Query: 161 TSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNS 220
                 C    C          +PC            ++G L        +   +   + 
Sbjct: 60  AYPAPGCPAPSC----GSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSK 115

Query: 221 VQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSG 280
           V   V+  C   +    L      G+ GL    +++P+ +A A  + N F +C      G
Sbjct: 116 VNVGVLAACAPSKLLASLPR-GSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPG 174

Query: 281 RIFFGDQGPATQQSTSFLA-----SNGKYITYIIGVETCCIGSSCLK-----QTSFKAIV 330
              FG       Q T  +      + G    + I   +  +G + +        +   ++
Sbjct: 175 VAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVML 234

Query: 331 DSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKC--------CYKSS----SQRL 378
            +   +  L  +VY  +   F + +     +                CY +     +   
Sbjct: 235 STRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGG 294

Query: 379 PKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFC------LAIQPVDGDIGTIGQNFMT 432
             +P+V+L     + + +     ++   Q            +A          +G   M 
Sbjct: 295 YAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQME 354

Query: 433 GYRVVFDRENLKLGWS----HSNCQDL 455
            + + FD E  +LG+S     + C  L
Sbjct: 355 DFVLDFDMEKKRLGFSRLPHFTGCGGL 381
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query531
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.6e-53  Score=439.79  Aligned_cols=305  Identities=24%  Similarity=0.380  Sum_probs=254.5

Q ss_pred             eeecCCCCCceEEEEEEecCCCeEEEEEEEcCCCceEEecC-CCCCCCCcccccccCCCCCCCCCCCCCCCCccccCCCC
Q 009593           92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHR  170 (531)
Q Consensus        92 ~~~l~~~~~~~y~~~i~IGTP~q~~~v~vDTGS~~~Wv~c~-C~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~~~C~~~  170 (531)
                      ..++.|+.+.+||++|.||||||+|.|++||||+++||+|. |..|..+          .++.|||++|+||+...    
T Consensus        47 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~----------~~~~yd~~~Sst~~~~~----  112 (370)
T d3psga_          47 DEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACS----------DHNQFNPDDSSTFEATS----  112 (370)
T ss_dssp             CCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGT----------TSCCBCGGGCTTCEEEE----
T ss_pred             ccccccccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCcccc----------cccccCCCcccccccCC----
Confidence            46788999999999999999999999999999999999997 7776432          24799999999999854    


Q ss_pred             CCCCCCCCCCCCCCCceEEecCCCCceeeEEEEEEEEEEecCCCCccccccccceEEEEEEeccCCCCCCCCCCeeeecC
Q 009593          171 LCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLG  250 (531)
Q Consensus       171 ~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~lg~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLG  250 (531)
                                    |.|.+.|++|  +++|.++.|++.+++.        ...++.|||+....+.++.....|||+|||
T Consensus       113 --------------~~~~~~Yg~G--s~~G~~~~d~~~~~~~--------~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~  168 (370)
T d3psga_         113 --------------QELSITYGTG--SMTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFLYYAPFDGILGLA  168 (370)
T ss_dssp             --------------EEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEECS
T ss_pred             --------------CcEEEEeCCc--eEEEEEEEEEEeeece--------eeeeeEEEEEeeccCceecccccccccccc
Confidence                          8999999998  7899999999999876        678999999999888776666789999999


Q ss_pred             CCCCC------hHHHHHhcCCC-CCcEEEeeecC--CCCcEEECCCCCCCC-eeeeeeecCCCceeEEEEeeEEEeCCeE
Q 009593          251 LGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ-QSTSFLASNGKYITYIIGVETCCIGSSC  320 (531)
Q Consensus       251 ~~~~S------~~~~L~~~g~i-~~~FS~~L~~~--~~G~l~fGg~d~~~~-~~~~~v~~~~~~~~y~V~l~~i~Vgg~~  320 (531)
                      +...+      +..+|.++|+| ++.||+|+.++  .+|.|+||++|+.+. +.+.|+++... .+|.|.++++.|+|+.
T Consensus       169 ~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~-~~w~v~~~~i~v~g~~  247 (370)
T d3psga_         169 YPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE-GYWQITLDSITMDGET  247 (370)
T ss_dssp             CGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE-TTEEEEECEEESSSSE
T ss_pred             cCcccccCCCchhhhhhhhcccccceeEEEeecCCCCCceEecCCcCchhcccceeEEeeccc-ceEEEEEeeEEeCCeE
Confidence            87654      46679999999 79999999875  568999999999884 47888887654 7999999999999988


Q ss_pred             ee-cCcceEEEecCccceeccHHHHHHHHHHHHhhccCcccccCCCCceeeeecCCCCCCCCCeEEEEecCCcEEEEcCC
Q 009593          321 LK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNP  399 (531)
Q Consensus       321 ~~-~~~~~aiiDSGTs~t~LP~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~itf~f~gg~~~~i~~~  399 (531)
                      +. .....+||||||++++||+++|++|.++|...    .....      +|.++|.....+|+|+|+| +|.++.|+++
T Consensus       248 ~~~~~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~----~~~~~------~~~~~C~~~~~~P~l~f~f-~g~~~~l~~~  316 (370)
T d3psga_         248 IACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGAS----ENSDG------EMVISCSSIDSLPDIVFTI-DGVQYPLSPS  316 (370)
T ss_dssp             EECTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCE----ECTTC------CEECCGGGGGGCCCEEEEE-TTEEEEECHH
T ss_pred             EecCCCccEEEecCCceEeCCHHHHHHHHHHhCCe----eecCC------cEEEeccccCCCceEEEEE-CCEEEEEChH
Confidence            76 34578999999999999999988887766433    22211      2556676666899999999 8999999999


Q ss_pred             eEEEEeccccceEEE-EEEe-----cCCCceeeCccceeceEEEEeCCCCEEEEeeC
Q 009593          400 VFVIYGTQVVTGFCL-AIQP-----VDGDIGTIGQNFMTGYRVVFDRENLKLGWSHS  450 (531)
Q Consensus       400 ~y~~~~~~~~~~~Cl-~i~~-----~~~~~~ILG~~fl~~~yvvFD~e~~riGfa~~  450 (531)
                      +|+++...    .|+ ++..     ..++.||||++|||++|+|||++|+||||||+
T Consensus       317 ~yi~~~~~----~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~  369 (370)
T d3psga_         317 AYILQDDD----SCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPV  369 (370)
T ss_dssp             HHEEECSS----CEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred             HeEEEcCC----eEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEec
Confidence            99987543    353 3332     23467999999999999999999999999986
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure