Citrus Sinensis ID: 009677

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------53
MFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
cccccccccccccccccccccccHHHHccccccccHHHHHccccccccEEEEEccccccccccccccccHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHHcccccccccEEEEccEEEEcccccccccccccEEEEEccccccccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHcccccccccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHccccccHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccc
cccccccccccccccccccccccEEEEEEccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEEccccccccccEEEccccHEEHHHHccccccccHHHHccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccccEEEEEEcccEEEEHHcHHEcccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccEEcccccccHHHHHHHHHHcHcHHHHHHHHHHHHHHHHHHHcccccEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcHEEEHcHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccHHHEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccEEEc
MFEEHVTKAvedgeygnsqnHSTIIEIIQetfgesetirqadlvempllvyvsrekrpehlhHFKAGALNVLLRVSgvisnspyilgldcdmycndptsaRQAMCfhldpkissslafvqfpqkfhninkydiydgrfrSAYCVQwqgmdglkgpvlsgtgyyikreSLYAdfthtelkdtfgksNVLINSLHQSYkqnnangenfsnVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILhckgwtstyltpfrpqflgtsttNLNDLLIqgtrwgsgltdvglsrfcpllygpsrmSLLQSmcygelsffpllyclplwclatlpqlcllngislypevsspsfiVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLrkasflptnkvldkeqvkryemgqfdfqtssmflVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIvrkdkgrispsaiLLSSVFFMIFLFFGSIILM
MFEEHVTkavedgeygnsqnhSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKasflptnkvldkeqVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
MFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVsspsfivfsfifisaiCKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
**********************TIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYK*******NFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL*
*****VTKAVEDGEYGNSQNHSTIIEIIQETFG********DLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTN*********RYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
********AVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
*****VTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
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MFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query529 2.2.26 [Sep-21-2011]
Q651X7737 Cellulose synthase-like p yes no 0.930 0.667 0.367 1e-95
Q8VYR4722 Cellulose synthase-like p yes no 0.905 0.663 0.380 8e-95
Q651X6728 Cellulose synthase-like p no no 0.930 0.675 0.368 4e-94
Q570S7760 Cellulose synthase-like p no no 0.903 0.628 0.385 4e-92
Q0DXZ1745 Cellulose synthase-like p no no 0.918 0.652 0.353 1e-89
Q0WVN5751 Cellulose synthase-like p no no 0.928 0.653 0.362 4e-89
Q8VZK9729 Cellulose synthase-like p no no 0.888 0.644 0.343 7e-84
Q8LPK5985 Cellulose synthase A cata no no 0.920 0.494 0.341 6e-82
Q9SWW61026 Cellulose synthase A cata no no 0.939 0.484 0.304 3e-79
Q69P511055 Cellulose synthase A cata no no 0.933 0.468 0.320 4e-79
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function desciption
 Score =  350 bits (898), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 188/512 (36%), Positives = 295/512 (57%), Gaps = 20/512 (3%)

Query: 19  QNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGV 78
           +NH  I++I+ +  G++      D   +P +VYV+REKRP++ H+FKAGALN L+RVS V
Sbjct: 243 KNHQPIVQILID--GKNRNAIDDDRNVLPTMVYVAREKRPQYHHNFKAGALNALIRVSSV 300

Query: 79  ISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRF 138
           IS+SP IL +DCDMY N+  S R A+CF LD ++   + FVQ+PQ F+N+ + DIY   F
Sbjct: 301 ISDSPVILNVDCDMYSNNSDSIRDALCFFLDEEMGQKIGFVQYPQIFNNMTQNDIYGNSF 360

Query: 139 RSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQ 198
             +Y V+  G+D + G +  GTG + +RE L       + K+ + +       + +  K+
Sbjct: 361 NVSYHVEMCGLDSVGGCLYIGTGCFHRREILCGRIFSKDYKENWNR------GIKERGKE 414

Query: 199 NNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY 258
           N        N ++E+   L +C+YEH+T+WG ++G+ Y   +ED+ TG  +HC+GW S +
Sbjct: 415 N-------INEIEEKATSLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLAIHCRGWESAF 467

Query: 259 LTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELS 318
           + P R  FLG + + L   ++Q  RW  G   + LS++C  L+G  ++ L   M Y    
Sbjct: 468 INPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSKYCSFLFGHGKIKLQLQMGYCICG 527

Query: 319 FFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGS 378
            +     LP      +P L L+ G  L+P++ SP    F ++F       L E + +G +
Sbjct: 528 LWA-ANSLPTLYYVVIPSLGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYEALLSGDT 586

Query: 379 IYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDF 438
           +  W N QR+WM+KS+T++ YG +DTI K +G+ K SF  T KV   ++ KRYE    +F
Sbjct: 587 LKGWWNGQRMWMVKSITSYLYGFIDTIRKCVGMSKMSFEVTAKVSGHDEAKRYEQEILEF 646

Query: 439 QTSSMFLVPMVSLMILNMAALLCGFIRIIA-VGN--WDKLFPQLLLSLYILIINFAIVEG 495
            +SS   V + ++ +LN   L+ G  +I+A V N  W+   PQ +L   I+IIN  I E 
Sbjct: 647 GSSSPEYVIIATVALLNFVCLVGGLSQIMAGVWNMPWNVFLPQAILCGMIVIINMPIYEA 706

Query: 496 MIVRKDKGRISPSAILLSSVFFMIFLFFGSII 527
           M +RKD GRI P+A+ L+S+ F++  F   I+
Sbjct: 707 MFLRKDNGRI-PTAVTLASIGFVMLAFLVPIV 737
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1 Back     alignment and function description
>sp|Q9SWW6|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1 Back     alignment and function description
>sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query529
359477703 733 PREDICTED: cellulose synthase-like prote 0.977 0.705 0.605 0.0
224111028 857 predicted protein [Populus trichocarpa] 0.973 0.600 0.609 0.0
297737188 822 unnamed protein product [Vitis vinifera] 0.922 0.593 0.599 0.0
356535446 740 PREDICTED: cellulose synthase-like prote 0.948 0.678 0.603 1e-177
356548660 736 PREDICTED: cellulose synthase-like prote 0.962 0.691 0.586 1e-176
429326514 723 cellulose synthase-like protein [Populus 0.969 0.709 0.578 1e-175
224111026 723 predicted protein [Populus trichocarpa] 0.969 0.709 0.574 1e-174
255576870 762 cellulose synthase, putative [Ricinus co 0.941 0.653 0.589 1e-173
255576868 711 cellulose synthase, putative [Ricinus co 0.926 0.689 0.569 1e-169
296083587 762 unnamed protein product [Vitis vinifera] 0.994 0.690 0.571 1e-165
>gi|359477703|ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/537 (60%), Positives = 403/537 (75%), Gaps = 20/537 (3%)

Query: 1   MFEEHVTKAVEDGEYGN---SQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKR 57
           +F E V +A E+G  G+   S +H +IIE+I            A+  EMP+LVYVSREKR
Sbjct: 208 LFRERVMRATENGGIGDKSISGDHPSIIEVIG-----------AEEAEMPILVYVSREKR 256

Query: 58  PEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLA 117
           P H HHFKAGALNVLLRVS +ISNSPYIL LDCDMYCNDP S RQAMC HLDP +S SLA
Sbjct: 257 PSHPHHFKAGALNVLLRVSSMISNSPYILVLDCDMYCNDPASVRQAMCCHLDPILSPSLA 316

Query: 118 FVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-----D 172
           FVQFPQ+FHNI+  DIYD + RSA+   W+GMDGL GPVLSGTG+Y+KR +LY      D
Sbjct: 317 FVQFPQRFHNISSNDIYDSQMRSAFSTLWEGMDGLDGPVLSGTGFYMKRVALYGTSIQGD 376

Query: 173 FTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV 232
            + TEL+ TFG S+  I SL   Y  N +NG +  +V+ +E  +LASC +E+QTKWGEEV
Sbjct: 377 TSLTELRQTFGYSDEFIKSLSPKYLPNISNGGDSVSVILKEARLLASCQFENQTKWGEEV 436

Query: 233 GILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVG 292
           G+LY SVSED+ TG+ LHCKGWTS +  P RPQF+G+S TNLNDLL+QGTRW SGL DVG
Sbjct: 437 GVLYHSVSEDVVTGYTLHCKGWTSVFCVPSRPQFVGSSVTNLNDLLVQGTRWSSGLVDVG 496

Query: 293 LSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSP 352
           +S+FCP +YGP + S L+++CY ELSFFP  Y LP+WC  T+PQLCL +G+ LYPEVS+ 
Sbjct: 497 ISKFCPFIYGPLKTSFLENICYSELSFFPF-YFLPVWCFGTIPQLCLFHGVPLYPEVSNS 555

Query: 353 SFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLR 412
            F VF FIF+SA  KHL EVI  GGSI  W NEQRIWMIKSVT+H YGS+D I+K + +R
Sbjct: 556 FFGVFPFIFLSACSKHLLEVILAGGSIQTWSNEQRIWMIKSVTSHLYGSLDAIMKRISMR 615

Query: 413 KASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNW 472
           KASFLPTNKV+D + VK Y+MG+FDF+ S+  L  MV+L++LNM A + G  R I  GNW
Sbjct: 616 KASFLPTNKVVDSDHVKLYQMGKFDFRISTTVLASMVTLVVLNMVAFMAGLARAIVFGNW 675

Query: 473 DKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM 529
           +K+  Q+LLSLYILI+++ ++EGMI+RKDKGRI  S  LLS VF M+FL  GS++L+
Sbjct: 676 EKMLIQVLLSLYILIMSYPVIEGMILRKDKGRIPYSVTLLSIVFAMVFLTLGSVVLL 732

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224111028|ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297737188|emb|CBI26389.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356535446|ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|356548660|ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|429326514|gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa] Back     alignment and taxonomy information
>gi|224111026|ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255576870|ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis] gi|223531245|gb|EEF33090.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255576868|ref|XP_002529320.1| cellulose synthase, putative [Ricinus communis] gi|223531244|gb|EEF33089.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296083587|emb|CBI23576.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query529
TAIR|locus:2138126760 CSLG1 "AT4G24010" [Arabidopsis 0.901 0.627 0.375 2.2e-84
TAIR|locus:2138116722 CSLG2 "AT4G24000" [Arabidopsis 0.903 0.662 0.377 3.4e-84
TAIR|locus:2012050729 CSLE1 "AT1G55850" [Arabidopsis 0.620 0.449 0.320 5.9e-81
TAIR|locus:2124167985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.637 0.342 0.327 1.6e-80
TAIR|locus:2138106751 CSLG3 "AT4G23990" [Arabidopsis 0.926 0.652 0.353 2.6e-79
TAIR|locus:21724571049 CESA4 "cellulose synthase A4" 0.659 0.332 0.308 3.2e-75
TAIR|locus:21363081084 CESA2 "cellulose synthase A2" 0.642 0.313 0.314 5.4e-75
TAIR|locus:21760901084 CESA6 "cellulose synthase 6" [ 0.633 0.309 0.306 5.7e-75
TAIR|locus:21789351026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.689 0.355 0.278 8.5e-75
TAIR|locus:21781931069 CESA5 "cellulose synthase 5" [ 0.625 0.309 0.307 1.1e-74
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 825 (295.5 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
 Identities = 186/495 (37%), Positives = 274/495 (55%)

Query:    20 NHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVI 79
             +H TII+++Q +  + +  R+     MP L+YVSREK     HHFKAGALN LLRVSGV+
Sbjct:   239 DHPTIIQVLQNSETDMDNTRK---YIMPNLIYVSREKSKVSPHHFKAGALNTLLRVSGVM 295

Query:    80 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR 139
             +NSP IL LDCDMY NDP +  +A+C+  DP+I S L +VQFPQKF  I+K DIY    +
Sbjct:   296 TNSPIILTLDCDMYSNDPATLVRALCYLTDPEIKSGLGYVQFPQKFLGISKNDIYACENK 355

Query:   140 SAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 199
               + +   G DGL GP   GTG +  R + Y       L +        IN L + Y+  
Sbjct:   356 RLFIINMVGFDGLMGPTHVGTGCFFNRRAFYGPPYMLILPE--------INEL-KPYRIA 406

Query:   200 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYL 259
             + + +   +VL     V A C YE+ T WG ++G  Y S+ ED +TGF+LHC+GW S + 
Sbjct:   407 DKSIKA-QDVLSLAHNV-AGCIYEYNTNWGSKIGFRYGSLVEDYYTGFMLHCEGWRSVFC 464

Query:   260 TPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSF 319
              P +  F G S   L DL+ Q  RW  GL ++  S++ P+ YG   + LL  + Y    F
Sbjct:   465 NPKKAAFYGDSPKCLVDLVGQQIRWAVGLFEMSFSKYSPITYGIKSLDLLMGLGYCNSPF 524

Query:   320 FPLLYCLPLWCLATLPQLCLLNGISLYPEVXXXXXXXXXXXXXXXXCKHLQEVISTGGSI 379
              P  + +PL     LPQL L++G+S++P+                  + L + +  GG+ 
Sbjct:   525 KPF-WSIPLTVYGLLPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGGTY 583

Query:   380 YAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDK-EQVKRYEMGQFDF 438
               W N+QR+ MIK +++ F+G ++ ILK L L    F  T+K  D  EQ KRYE   FDF
Sbjct:   584 RKWWNDQRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRKRYEQEIFDF 643

Query:   439 QTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIV 498
              TSS   +P+ ++ I+N+ A + G   I+  G   +L+ +L+L  + ++    I   M++
Sbjct:   644 GTSSSMFLPLTTVAIVNLLAFVWGLYGILFCGG--ELYLELMLVSFAVVNCLPIYGAMVL 701

Query:   499 RKDKGRISPSAILLS 513
             RKD G++S     L+
Sbjct:   702 RKDDGKLSKRTCFLA 716
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
GO:0006863 "purine nucleobase transport" evidence=RCA
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query529
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 1e-155
PLN021891040 PLN02189, PLN02189, cellulose synthase 5e-95
PLN024001085 PLN02400, PLN02400, cellulose synthase 5e-87
PLN02190756 PLN02190, PLN02190, cellulose synthase-like protei 8e-79
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 5e-65
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 5e-56
PLN02195977 PLN02195, PLN02195, cellulose synthase A 5e-56
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 4e-55
PLN024361094 PLN02436, PLN02436, cellulose synthase A 2e-51
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 8e-51
PLN024361094 PLN02436, PLN02436, cellulose synthase A 8e-41
PLN02195977 PLN02195, PLN02195, cellulose synthase A 9e-41
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 2e-40
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 1e-39
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 7e-39
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 4e-12
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-08
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 2e-06
cd06423180 cd06423, CESA_like, CESA_like is the cellulose syn 4e-04
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 0.002
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  459 bits (1184), Expect = e-155
 Identities = 199/513 (38%), Positives = 296/513 (57%), Gaps = 18/513 (3%)

Query: 18  SQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSG 77
            Q+H T+I+++ E    S   +      MP L+YVSREK     HHFKAGALN LLRVS 
Sbjct: 239 RQDHPTVIQVLLE----SGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSA 294

Query: 78  VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGR 137
            ++N+P IL LDCDMY NDP +  +A+C+ LDP +   L +VQFPQ FH INK DIY G 
Sbjct: 295 TMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGE 354

Query: 138 FRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYK 197
            +  + +   GMDGL GP   GTG + +R   Y   +   L +        +N  H   K
Sbjct: 355 LKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPE-----LNPDHLVDK 409

Query: 198 QNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTST 257
              +       VL     V A C+YE+QT WG ++G  Y S+ ED +TG+ L C+GW S 
Sbjct: 410 SIKSQ-----EVLALAHHV-AGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSI 463

Query: 258 YLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGEL 317
           +  P RP FLG S  NL+D+L Q  RW  GL +V  S++ P+ +G   + LL  + Y   
Sbjct: 464 FCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHY 523

Query: 318 SFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGG 377
           +F+P ++ +P+   A LPQL LLNG+S++P+ S P F ++ F+F+ A  + L + + +GG
Sbjct: 524 AFWP-IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGG 582

Query: 378 SIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFD 437
           +I  W N+QR+WMI+ +++  +G ++ +LK LG+    F  T+KV+D+EQ KRYE G F+
Sbjct: 583 TIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFE 642

Query: 438 FQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMI 497
           F  SS   +P+ +  I+N+ + L G  +I    N + LF Q+ L+ + ++  + I E M+
Sbjct: 643 FGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCWPIYEAMV 702

Query: 498 VRKDKGRISPSAILLSSVFFMIFLFF-GSIILM 529
           +R D G++ P  I L S+     L+   S    
Sbjct: 703 LRTDDGKL-PVKITLISIVLAWALYLASSFAFK 734

Length = 734
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 529
PF03552720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PLN026381079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN024361094 cellulose synthase A 100.0
PLN024001085 cellulose synthase 100.0
PLN021891040 cellulose synthase 100.0
PLN02195977 cellulose synthase A 100.0
PLN029151044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN022481135 cellulose synthase-like protein 100.0
PLN02190756 cellulose synthase-like protein 100.0
PLN02893734 Cellulose synthase-like protein 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK05454691 glucosyltransferase MdoH; Provisional 100.0
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 100.0
PRK14583444 hmsR N-glycosyltransferase; Provisional 99.97
COG1215439 Glycosyltransferases, probably involved in cell wa 99.96
PRK11204420 N-glycosyltransferase; Provisional 99.96
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 99.94
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.94
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.92
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.92
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.92
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.9
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.9
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.87
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.86
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.82
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.82
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.81
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.81
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.81
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.79
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 99.76
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.74
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.65
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.63
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.61
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.55
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.42
cd06438183 EpsO_like EpsO protein participates in the methano 99.37
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.28
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.22
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.2
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.19
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.15
cd06442224 DPM1_like DPM1_like represents putative enzymes si 99.11
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 99.1
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 99.1
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 99.09
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 99.06
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 99.05
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 99.0
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 98.99
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 98.98
cd04188211 DPG_synthase DPG_synthase is involved in protein N 98.93
cd06423180 CESA_like CESA_like is the cellulose synthase supe 98.92
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 98.82
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 98.72
PRK10073328 putative glycosyl transferase; Provisional 98.71
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 98.7
KOG2571862 consensus Chitin synthase/hyaluronan synthase (gly 98.66
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 98.63
COG1216305 Predicted glycosyltransferases [General function p 98.61
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 98.53
PRK10018279 putative glycosyl transferase; Provisional 98.49
PRK10063248 putative glycosyl transferase; Provisional 98.45
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 98.05
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 98.02
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 97.95
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 97.4
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 96.49
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 95.31
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 94.71
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 94.53
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 90.67
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 86.28
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 83.77
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information 
Probab=100.00  E-value=2.1e-133  Score=1092.94  Aligned_cols=515  Identities=42%  Similarity=0.763  Sum_probs=480.2

Q ss_pred             hHHHhhhhhhcC-------------C---CCccccccceEEEEecCCCchhhHHHhhhccCCcEEEEEccCCCCCCCCCc
Q 009677            2 FEEHVTKAVEDG-------------E---YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFK   65 (529)
Q Consensus         2 ~~~~~~~~~~~~-------------~---~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~Rek~p~~~~~~K   65 (529)
                      |+.|||.+++++             .   +.+++|||+||||+++++++.    |.++.++|+++||+|||||+++||+|
T Consensus       109 ~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~----~~~g~~lP~lvYvsREKrp~~~Hh~K  184 (720)
T PF03552_consen  109 FKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGK----DVDGNELPMLVYVSREKRPGYPHHFK  184 (720)
T ss_pred             HHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCc----ccccCcCCeEEEEeccCCCCCCchhh
Confidence            688898665433             2   568999999999999998765    66788999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceeccCCCcchHHHHHHHHHHHH
Q 009677           66 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQ  145 (529)
Q Consensus        66 AGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~n~~~~d~~~~~~~~f~~~~  145 (529)
                      |||||+++|+|++|||+|||+|+|||||.|||+.++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++
T Consensus       185 AGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~~~~~~  264 (720)
T PF03552_consen  185 AGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRVFFDIN  264 (720)
T ss_pred             hcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCccceeeeecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCcccccccceEecccccc-CCch-------------------------------------------------
Q 009677          146 WQGMDGLKGPVLSGTGYYIKRESLYA-DFTH-------------------------------------------------  175 (529)
Q Consensus       146 ~~g~d~~~~~~~~Gtg~v~RR~aL~g-~p~~-------------------------------------------------  175 (529)
                      ++|+||+|||+|+||||+|||+|||| +|++                                                 
T Consensus       265 ~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (720)
T PF03552_consen  265 MRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFALEDIE  344 (720)
T ss_pred             ccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcccccccccchhccccccccccccccccccc
Confidence            99999999999999999999999999 7762                                                 


Q ss_pred             ----------------hhhhhccCCchhhHhhhhhhhcccCCCCCCchhhhHHhhccccccccccccccccccccCCCCc
Q 009677          176 ----------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV  239 (529)
Q Consensus       176 ----------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG~~~~sv  239 (529)
                                      ++++++||+|++|++|+..+..  ..+......++++||++|+||.||++|+||+||||.|+|+
T Consensus       345 ~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~--~~~~~~~~~~~L~EA~~V~sC~YE~~T~WGkevGwiYGSv  422 (720)
T PF03552_consen  345 EGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQG--GVPRSPSPASLLEEAIHVASCGYEDKTEWGKEVGWIYGSV  422 (720)
T ss_pred             cccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhc--CCCCCCChHHHHHHHHHHhcCCccccCCcccccceEEEec
Confidence                            1344679999999999987643  3334556689999999999999999999999999999999


Q ss_pred             cchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHHhhhhhhccccccccccccCccccC-CCCCCHHHHHHHHHHh
Q 009677          240 SEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELS  318 (529)
Q Consensus       240 tED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qv~~~~~~p~~~~-~~~l~~~qrl~y~~~~  318 (529)
                      |||+.||++||++||||+||+|++++|.|+||+|+.+.+.|++|||.|++||++|||||++++ .++|+++||++|++.+
T Consensus       423 tEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~~~~  502 (720)
T PF03552_consen  423 TEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYLNYM  502 (720)
T ss_pred             ccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999987 5799999999999999


Q ss_pred             HhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHHHHHHHHHHHHHHHHHHhCCccchhhchhhHHHHHHHHHHH
Q 009677          319 FFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHF  398 (529)
Q Consensus       319 ~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~  398 (529)
                      +|| ++|+|.++|+++|++||++|++++|+++.+|+.+++++|+++++++++|++|+|.++++|||+||+|++.++++++
T Consensus       503 ~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~L  581 (720)
T PF03552_consen  503 LYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHL  581 (720)
T ss_pred             hhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHH
Confidence            999 9999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCcceeeccCccchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHHHc--CCcchhH
Q 009677          399 YGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAV--GNWDKLF  476 (529)
Q Consensus       399 ~~~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~--g~~~~~~  476 (529)
                      ++++++++|+||+++.+|.||+|..++++++ | ++.|+|+ ++++++|.++++++|++|+++|+++.+..  ++|++++
T Consensus       582 fAvl~~iLK~lg~s~t~F~VTsK~~dde~~~-~-~ely~f~-wS~LfiP~tTllilNLva~v~Gi~r~i~~g~~~~g~l~  658 (720)
T PF03552_consen  582 FAVLQGILKVLGGSETSFTVTSKVSDDEDDK-Y-AELYIFK-WSPLFIPPTTLLILNLVAFVVGISRAINSGYGSWGPLL  658 (720)
T ss_pred             HHHHHHHHHHHcCCccceeeccccccccccc-c-ccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhccCCCchhHHH
Confidence            9999999999999999999999998744433 3 3678898 89999999999999999999999999864  3689999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhhc
Q 009677          477 PQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL  528 (529)
Q Consensus       477 ~~l~~~~w~v~~l~p~~~al~~r~~~~~~p~~~~~~s~~~~~~~~~~~~~~~  528 (529)
                      +++++++|+++|++||++|||+||+  ++|+|+++||++||++|+++|+.++
T Consensus       659 g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv~i~  708 (720)
T PF03552_consen  659 GQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWVRID  708 (720)
T ss_pred             HHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHheecc
Confidence            9999999999999999999999976  5899999999999999999999875

The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query529
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 47/330 (14%), Positives = 94/330 (28%), Gaps = 112/330 (33%)

Query: 3   EEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVS-REK----- 56
           EE V K VE+       N+  ++  I+      E  + + +  M    Y+  R++     
Sbjct: 76  EEMVQKFVEEVL---RINYKFLMSPIKT-----EQRQPSMMTRM----YIEQRDRLYNDN 123

Query: 57  ---------RPEHLHHFKAGAL------NVLLR----------VSGVISNSPYILGLDCD 91
                    R +     +   L      NVL+              V  +      +D  
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183

Query: 92  MY------CNDPTS---ARQAMCFHLDPKISS-SLAFVQFPQKFHNINKY---------- 131
           ++      CN P +     Q + + +DP  +S S        + H+I             
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243

Query: 132 --------DIYDGRFRSAYCVQWQGMDGLKGPVL-------------SGTGYYIKRESLY 170
                   ++ + +        W   + L   +L             + T  +I  +   
Sbjct: 244 ENCLLVLLNVQNAKA-------WNAFN-LSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295

Query: 171 ADFTHTELKDTFGK-----------SNVLINSLHQS-----YKQNNANGENFSNVLQEET 214
              T  E+K    K             +  N    S      +   A  +N+ +V  ++ 
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355

Query: 215 GVLASCSYEHQTKWGEEVGILYQSVSEDLF 244
             +   S         E   ++  +S  +F
Sbjct: 356 TTIIESSLNVLEP--AEYRKMFDRLS--VF 381

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query529
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 100.0
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.33
3bcv_A240 Putative glycosyltransferase protein; protein stru 99.28
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 99.28
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.24
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.15
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.13
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.07
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 98.93
4fix_A657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 98.78
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 98.71
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 98.64
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 98.18
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 97.57
2bo4_A397 Mannosylglycerate synthase; catalysis, glycosyltra 97.17
2zu9_A394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 84.48
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 80.93
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 80.72
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=100.00  E-value=4.9e-41  Score=384.18  Aligned_cols=361  Identities=19%  Similarity=0.294  Sum_probs=274.1

Q ss_pred             CcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCCchHHHHHHhhhcCCCCCCceEEEccCceec
Q 009677           47 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH  126 (529)
Q Consensus        47 p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDaD~~~~~p~~l~~~l~~f~d~~~~~~va~VQ~pq~f~  126 (529)
                      .++.|+.|+++    +++|+||+|.+++.    +++|||+++|||++++ |++|++.+.+|.+   +|++++||+|+.+.
T Consensus       212 ~~v~~i~~~~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~---dp~v~~V~~~~~~~  279 (802)
T 4hg6_A          212 LGVVYSTRERN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVE---DPDLFLVQTPHFFI  279 (802)
T ss_dssp             HTCEEEECSSC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHH---SSSCCEEECCCCBS
T ss_pred             cCcEEEEecCC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhc---CCCeEEEeccEEEe
Confidence            47889999876    58999999999999    8999999999999998 9999999999963   58999999999998


Q ss_pred             cCCCc-------chHHHHHHHHHHHHHHHhhccCCcccccccceEeccccccCCchhhhhhccCCchhhHhhhhhhhccc
Q 009677          127 NINKY-------DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN  199 (529)
Q Consensus       127 n~~~~-------d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~v~RR~aL~g~p~~~~~~~~~g~~~~~~~~~~~~~~~~  199 (529)
                      |.++.       +.+.++...++.....+.+.+++++++|+++++||+++                              
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al------------------------------  329 (802)
T 4hg6_A          280 NPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRAL------------------------------  329 (802)
T ss_dssp             SCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHH------------------------------
T ss_pred             CCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHH------------------------------
Confidence            76411       11112346788899999999999999999999999999                              


Q ss_pred             CCCCCCchhhhHHhhccccccccccccccccccc-cCCCCccchHHHHHHHHhCCCeEEEeCCCCCceecccCCCHHHHH
Q 009677          200 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVG-ILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLL  278 (529)
Q Consensus       200 ~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~iG-~~~~svtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~  278 (529)
                                                    +++| |++++++||.+++.+++++||++.|+++  +..++.+|+|+.+++
T Consensus       330 ------------------------------~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~  377 (802)
T 4hg6_A          330 ------------------------------DEAGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFI  377 (802)
T ss_dssp             ------------------------------HHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHH
T ss_pred             ------------------------------HHcCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHH
Confidence                                          6786 9999999999999999999999999987  789999999999999


Q ss_pred             hhhhhhccccccccccccCccccCCCCCCHHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHhCCccccCCCchhHHHHH
Q 009677          279 IQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFS  358 (529)
Q Consensus       279 ~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~l~~i~~l~y~~~P~~~ll~g~~~~p~~~~~~~~~~~  358 (529)
                      +||.||++|.+|+++ +++|++  .+++++.||++|+....++ +.+++.++++++|+++++++..+++.....++..  
T Consensus       378 ~Qr~RW~~G~~q~l~-~~~pl~--~~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~--  451 (802)
T 4hg6_A          378 QQRGRWATGMMQMLL-LKNPLF--RRGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAY--  451 (802)
T ss_dssp             HHHHHHHHHHHHHHH-HSCTTS--CSSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHH--
T ss_pred             HHHHHHHccHHHHHH-HhCccc--cCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHH--
Confidence            999999999999987 557876  3789999999999988887 8888899999999999999998876432222221  


Q ss_pred             HHHHHHHHHH-HHHHHHhCCccchhhchhhHHHHHHHHHHHHHHHHHHHHHHcCCCcceeeccCccchhhhhhhccccee
Q 009677          359 FIFISAICKH-LQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFD  437 (529)
Q Consensus       359 ~~~~~~~~~~-ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~~ll~~l~~~~~~F~VTpK~~~~~~~~~y~~~~f~  437 (529)
                        ++++.+.. ++.....+.....||..    ++..+ ..++.+...+..++++++.+|+||+|+...+.      +.  
T Consensus       452 --~lp~~l~~~~~~~~~~~~~r~~~~~~----l~~~~-~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~------~~--  516 (802)
T 4hg6_A          452 --MPGYLAVSFLVQNALFARQRWPLVSE----VYEVA-QAPYLARAIVTTLLRPRSARFAVTAKDETLSE------NY--  516 (802)
T ss_dssp             --HHHHHHHHHHHHHHHHTTTSCTTHHH----HHHHH-HHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS------CC--
T ss_pred             --HHHHHHHHHHHHHHHhcCcHHHHHHH----HHHHH-HHHHHHHHHHHHHhCCCCCcceECCCCccccc------cc--
Confidence              12222222 22222223333345543    23322 33444455555667889999999999976542      11  


Q ss_pred             ecccchhhHHHHHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHH---HhhhcCCCCCch
Q 009677          438 FQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEG---MIVRKDKGRISP  507 (529)
Q Consensus       438 ~~~~s~l~~P~~~l~~l~l~alv~gi~~~~~~g~~~~~~~~l~~~~w~v~~l~p~~~a---l~~r~~~~~~p~  507 (529)
                         .+.+..|++++++++++++++|++++...+.  .....+++++|.+++++....+   .+.|+++++.|+
T Consensus       517 ---~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~R  584 (802)
T 4hg6_A          517 ---ISPIYRPLLFTFLLCLSGVLATLVRWVAFPG--DRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAPR  584 (802)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCCC
T ss_pred             ---hhhHHHHHHHHHHHHHHHHHHHHHHHhccCC--ccchhhhhhHHHHHHHHHHHHHHHHHhcCCCcccccc
Confidence               1256789999999999999999999875432  2233445555655555555555   444666665554
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query529
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.18
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 98.59
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 98.31
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 92.99
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=1.4e-11  Score=122.59  Aligned_cols=83  Identities=14%  Similarity=0.008  Sum_probs=60.5

Q ss_pred             ccccccceE-E-EEecCCCchhh---HHHhh-hccCCcEEEEEccCCCCCCCCCcHHHHHHHHHhcCCCCCCCEEEEeCC
Q 009677           17 NSQNHSTII-E-IIQETFGESET---IRQAD-LVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDC   90 (529)
Q Consensus        17 ~~~~h~~~i-~-v~~~~~~~~~~---~~~~~-~~~~p~l~yv~Rek~p~~~~~~KAGaLN~~L~~s~~~s~g~~i~ilDa   90 (529)
                      ..|++|... + |++||.+++++   ..++. ....+.+.+++.+++     .++++|.|.|++.    ++||||+.+|+
T Consensus        46 ~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n-----~G~~~a~N~Gi~~----a~gd~i~flD~  116 (328)
T d1xhba2          46 INRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDA  116 (328)
T ss_dssp             HHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEES
T ss_pred             HhcCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEeccc-----ccchHHHHHHHHh----hhcceeeecCc
Confidence            456666532 3 44455544432   23333 333457888876654     6899999999999    99999999999


Q ss_pred             CCCCCCchHHHHHHhhhcC
Q 009677           91 DMYCNDPTSARQAMCFHLD  109 (529)
Q Consensus        91 D~~~~~p~~l~~~l~~f~d  109 (529)
                      |.++. |++|.+.+..+.+
T Consensus       117 D~~~~-p~~l~~l~~~~~~  134 (328)
T d1xhba2         117 HCECT-AGWLEPLLARIKH  134 (328)
T ss_dssp             SEEEC-TTCHHHHHHHHHH
T ss_pred             ccccC-hhHHHHHHHHHhc
Confidence            99998 9999999998875
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure