Citrus Sinensis ID: 009747
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 527 | 2.2.26 [Sep-21-2011] | |||||||
| P51820 | 530 | Bifunctional dihydrofolat | no | no | 0.982 | 0.977 | 0.820 | 0.0 | |
| P45350 | 528 | Bifunctional dihydrofolat | N/A | no | 1.0 | 0.998 | 0.784 | 0.0 | |
| O81395 | 521 | Bifunctional dihydrofolat | N/A | no | 0.981 | 0.992 | 0.776 | 0.0 | |
| Q05762 | 519 | Bifunctional dihydrofolat | yes | no | 0.977 | 0.992 | 0.760 | 0.0 | |
| Q05763 | 565 | Bifunctional dihydrofolat | no | no | 0.973 | 0.907 | 0.762 | 0.0 | |
| Q2QRX6 | 494 | Putative bifunctional dih | no | no | 0.937 | 1.0 | 0.761 | 0.0 | |
| Q27793 | 521 | Bifunctional dihydrofolat | N/A | no | 0.907 | 0.917 | 0.466 | 1e-133 | |
| P16126 | 520 | Bifunctional dihydrofolat | N/A | no | 0.895 | 0.907 | 0.458 | 1e-133 | |
| Q27828 | 462 | Bifunctional dihydrofolat | N/A | no | 0.869 | 0.991 | 0.470 | 1e-133 | |
| Q27783 | 527 | Bifunctional dihydrofolat | N/A | no | 0.910 | 0.910 | 0.457 | 1e-131 |
| >sp|P51820|DRTS_SOYBN Bifunctional dihydrofolate reductase-thymidylate synthase OS=Glycine max PE=1 SV=1 | Back alignment and function desciption |
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Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/518 (82%), Positives = 471/518 (90%)
Query: 10 SNGNVSTQPNPKRSYQVVVAATRDMGIGKDGKLPWKLPSDLKFFKEITQITSDAGKRNAV 69
SNG+V+ PN +R+YQVVVAAT+D GIGKDGKLPW+LP+DLKFFKEIT TS+ GK+NA+
Sbjct: 13 SNGSVNPLPNLQRTYQVVVAATQDWGIGKDGKLPWRLPTDLKFFKEITMKTSEPGKKNAI 72
Query: 70 IMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATVENVVICGSIGSALELLAASPYCLS 129
+MGRKTWESIPLE+RPL GRLNVVLTRSGSFDIAT ENVVICGS+ SALELLAASPY LS
Sbjct: 73 VMGRKTWESIPLEYRPLSGRLNVVLTRSGSFDIATAENVVICGSMSSALELLAASPYSLS 132
Query: 130 IEKVFVIGGGQILSEALNAPECDAIHITEIETRIECDTFIPSIDSSVFQPWYSSFPIVEN 189
IEKVFVIGGGQI EALN P C+AIH+TEI++ IECDTF+P +D ++F+PWYSSFP VEN
Sbjct: 133 IEKVFVIGGGQIFREALNVPGCEAIHLTEIQSSIECDTFMPPVDFTIFRPWYSSFPKVEN 192
Query: 190 NIRYCLSTYVRVRSAAVESLSQNNDIVLDSKTNSDKFEVKQFSFLPKMVFEKHEEYLYLR 249
NIRY +TYVRVRS+A ES QN D +LD+ + S KFEVK FSFLPKM+ E+HEEYLYL+
Sbjct: 193 NIRYSFTTYVRVRSSAAESAGQNIDPLLDNNSESMKFEVKDFSFLPKMISERHEEYLYLK 252
Query: 250 LVQDIISDGNLKDDRTGTGTLSKFGCQMRYNLRTTFPLLTTKKVFWRGVVEELLWFISGS 309
LVQDII++G K DRTGTGTLSKFGCQMR+NLR FPLLTTKKVFWRGVVEELLWFISGS
Sbjct: 253 LVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVEELLWFISGS 312
Query: 310 TNAKVLQEKDIHIWDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSG 369
TNAKVLQEK IHIWDGNASREYLD VGLT+REEGDLGPVYGFQWRHFGARYT+MH DYSG
Sbjct: 313 TNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFGARYTDMHHDYSG 372
Query: 370 QGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQR 429
QGFDQLLDVINKIK NP+DRRI+LSAWNP DLKLMALPPCHMFAQFY+A+GELSCQMYQR
Sbjct: 373 QGFDQLLDVINKIKRNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVAHGELSCQMYQR 432
Query: 430 SADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKP 489
SADMGLG+PFNIASYALLTCMIAHVCDL PGDFIHVIGDAH+YRNHVRPL+EQL PKP
Sbjct: 433 SADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPLQEQLHNQPKP 492
Query: 490 FPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 527
FP LKINP+KKDIDSFVA DFKLIGYDPHQKI+MK++V
Sbjct: 493 FPTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLSV 530
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Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism. Can play two different roles depending on the source of dihydrofolate: de novo synthesis of tetrahydrofolate or recycling of the dihydrofolate released as one of the end products of the TS catalyzed reaction. Catalyzes an essential reaction for de novo glycine and purine synthesis, DNA precursor synthesis, and for the conversion of dUMP to dTMP. Glycine max (taxid: 3847) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 5 |
| >sp|P45350|DRTS_DAUCA Bifunctional dihydrofolate reductase-thymidylate synthase OS=Daucus carota PE=2 SV=1 | Back alignment and function description |
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| >sp|O81395|DRTS_MAIZE Bifunctional dihydrofolate reductase-thymidylate synthase OS=Zea mays GN=DRTS PE=2 SV=1 | Back alignment and function description |
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| >sp|Q05762|DRTS1_ARATH Bifunctional dihydrofolate reductase-thymidylate synthase 1 OS=Arabidopsis thaliana GN=THY-1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q05763|DRTS2_ARATH Bifunctional dihydrofolate reductase-thymidylate synthase 2 OS=Arabidopsis thaliana GN=THY-2 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q2QRX6|DRTS_ORYSJ Putative bifunctional dihydrofolate reductase-thymidylate synthase OS=Oryza sativa subsp. japonica GN=Os12g0446900 PE=3 SV=2 | Back alignment and function description |
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| >sp|Q27793|DRTS_TRYCR Bifunctional dihydrofolate reductase-thymidylate synthase OS=Trypanosoma cruzi PE=1 SV=2 | Back alignment and function description |
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| >sp|P16126|DRTS_LEIAM Bifunctional dihydrofolate reductase-thymidylate synthase OS=Leishmania amazonensis PE=3 SV=1 | Back alignment and function description |
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| >sp|Q27828|DRTS_PARTE Bifunctional dihydrofolate reductase-thymidylate synthase OS=Paramecium tetraurelia GN=GSPATT00019973001 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q27783|DRTS_TRYBB Bifunctional dihydrofolate reductase-thymidylate synthase OS=Trypanosoma brucei brucei PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 527 | ||||||
| 224080379 | 528 | dihydrofolate reductase-thymidylate synt | 1.0 | 0.998 | 0.854 | 0.0 | |
| 225428412 | 524 | PREDICTED: bifunctional dihydrofolate re | 0.994 | 1.0 | 0.846 | 0.0 | |
| 255543751 | 528 | bifunctional dihydrofolate reductase-thy | 1.0 | 0.998 | 0.837 | 0.0 | |
| 449462208 | 527 | PREDICTED: bifunctional dihydrofolate re | 0.996 | 0.996 | 0.829 | 0.0 | |
| 297744418 | 608 | unnamed protein product [Vitis vinifera] | 0.952 | 0.825 | 0.819 | 0.0 | |
| 356538745 | 528 | PREDICTED: bifunctional dihydrofolate re | 1.0 | 0.998 | 0.810 | 0.0 | |
| 356545155 | 530 | PREDICTED: bifunctional dihydrofolate re | 0.981 | 0.975 | 0.816 | 0.0 | |
| 351725903 | 530 | bifunctional dihydrofolate reductase-thy | 0.982 | 0.977 | 0.820 | 0.0 | |
| 356508312 | 530 | PREDICTED: bifunctional dihydrofolate re | 1.0 | 0.994 | 0.809 | 0.0 | |
| 164564740 | 528 | CM0216.390.nc [Lotus japonicus] | 0.998 | 0.996 | 0.810 | 0.0 |
| >gi|224080379|ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa] gi|222849082|gb|EEE86629.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/528 (85%), Positives = 493/528 (93%), Gaps = 1/528 (0%)
Query: 1 MAADSKTSLSNGNVSTQ-PNPKRSYQVVVAATRDMGIGKDGKLPWKLPSDLKFFKEITQI 59
M+ DS +LSNGN +TQ +P+++YQVVVAAT+DMGIGKDGKLPWKLPSDLKFFK++T
Sbjct: 1 MSGDSVANLSNGNANTQQSDPRKTYQVVVAATKDMGIGKDGKLPWKLPSDLKFFKDLTLT 60
Query: 60 TSDAGKRNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATVENVVICGSIGSALE 119
T D+GK+NAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIAT ENVVICGS+GSALE
Sbjct: 61 TMDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMGSALE 120
Query: 120 LLAASPYCLSIEKVFVIGGGQILSEALNAPECDAIHITEIETRIECDTFIPSIDSSVFQP 179
LLAASPYCLSIEKVFVIGGGQIL E+LNAP CDAIHITEIET +CDTFIP+ID+SVFQP
Sbjct: 121 LLAASPYCLSIEKVFVIGGGQILRESLNAPGCDAIHITEIETDFDCDTFIPAIDTSVFQP 180
Query: 180 WYSSFPIVENNIRYCLSTYVRVRSAAVESLSQNNDIVLDSKTNSDKFEVKQFSFLPKMVF 239
WYSSFP VEN+IR+C +TYVRVRS+ +ES SQNN D + + KFEVK+FSFLPKMVF
Sbjct: 181 WYSSFPKVENDIRHCFTTYVRVRSSTIESHSQNNGENSDGNSENSKFEVKKFSFLPKMVF 240
Query: 240 EKHEEYLYLRLVQDIISDGNLKDDRTGTGTLSKFGCQMRYNLRTTFPLLTTKKVFWRGVV 299
E+HEEYLYLR+VQDIISDGNLKDDRTGTGTLSKFGCQMR+NLR FPLLTTKKVFWRGVV
Sbjct: 241 ERHEEYLYLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFPLLTTKKVFWRGVV 300
Query: 300 EELLWFISGSTNAKVLQEKDIHIWDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGAR 359
EELLWFISGST+AKVLQEK IHIWDGNASREYLDS+GL DREEGDLGPVYGFQWRHFGAR
Sbjct: 301 EELLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGAR 360
Query: 360 YTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMAN 419
YT+MHADY+GQGFDQLLDVI+KIKNNPNDRRI++SAWNPSDLKLMALPPCHMFAQFY+AN
Sbjct: 361 YTDMHADYTGQGFDQLLDVIDKIKNNPNDRRIIISAWNPSDLKLMALPPCHMFAQFYVAN 420
Query: 420 GELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPL 479
GELSCQMYQRSADMGLGVPFNIASYALLTC+IAHVCDL PGDF+HVIGDAHVY H+RPL
Sbjct: 421 GELSCQMYQRSADMGLGVPFNIASYALLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPL 480
Query: 480 EEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 527
+EQL+KLPKPFPILKIN EKKDID+FVA DFKLIGYDPHQKIEMKMAV
Sbjct: 481 QEQLRKLPKPFPILKINSEKKDIDTFVAADFKLIGYDPHQKIEMKMAV 528
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225428412|ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255543751|ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Ricinus communis] gi|223547949|gb|EEF49441.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449462208|ref|XP_004148833.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Cucumis sativus] gi|449507353|ref|XP_004163007.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297744418|emb|CBI37680.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356538745|ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356545155|ref|XP_003541010.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|351725903|ref|NP_001238644.1| bifunctional dihydrofolate reductase-thymidylate synthase [Glycine max] gi|1706522|sp|P51820.1|DRTS_SOYBN RecName: Full=Bifunctional dihydrofolate reductase-thymidylate synthase; Short=DHFR-TS; Includes: RecName: Full=Dihydrofolate reductase; Includes: RecName: Full=Thymidylate synthase gi|999190|gb|AAB34317.1| dihydrofolate reductase-thymidylate synthase [Glycine max] gi|1096144|prf||2111237A dihydrofolate reductase-thymidylate synthase | Back alignment and taxonomy information |
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| >gi|356508312|ref|XP_003522902.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|164564740|dbj|BAF98221.1| CM0216.390.nc [Lotus japonicus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 527 | ||||||
| TAIR|locus:2042649 | 519 | THY-1 "thymidylate synthase 1" | 0.977 | 0.992 | 0.760 | 3.9e-227 | |
| TAIR|locus:2139544 | 565 | THY-2 "thymidylate synthase 2" | 0.971 | 0.906 | 0.764 | 8.5e-223 | |
| ZFIN|ZDB-GENE-040426-59 | 319 | tyms "thymidylate synthase" [D | 0.540 | 0.893 | 0.659 | 9.2e-107 | |
| MGI|MGI:98878 | 307 | Tyms "thymidylate synthase" [M | 0.544 | 0.934 | 0.662 | 6.5e-106 | |
| UNIPROTKB|F1MY63 | 354 | TYMS "Thymidylate synthase" [B | 0.483 | 0.720 | 0.666 | 1.7e-105 | |
| RGD|3921 | 307 | Tyms "thymidylate synthetase" | 0.555 | 0.954 | 0.648 | 1.7e-105 | |
| UNIPROTKB|P04818 | 313 | TYMS "Thymidylate synthase" [H | 0.542 | 0.913 | 0.667 | 2.2e-105 | |
| UNIPROTKB|F1PU23 | 314 | TYMS "Uncharacterized protein" | 0.542 | 0.910 | 0.664 | 2.8e-105 | |
| UNIPROTKB|Q2TA32 | 354 | TYMS "Thymidylate synthase" [B | 0.483 | 0.720 | 0.666 | 9.4e-105 | |
| TAIR|locus:2049389 | 492 | AT2G21550 [Arabidopsis thalian | 0.652 | 0.699 | 0.567 | 5.3e-104 |
| TAIR|locus:2042649 THY-1 "thymidylate synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2192 (776.7 bits), Expect = 3.9e-227, P = 3.9e-227
Identities = 398/523 (76%), Positives = 467/523 (89%)
Query: 7 TSLSNGNVSTQ--PNPKRSYQVVVAATRDMGIGKDGKLPWKLPSDLKFFKEITQITSDAG 64
T+ N +V+T P+R+YQVVVAAT++MGIGKDGKLPW LP+DLKFFK+IT TSD+
Sbjct: 3 TTTLNDSVTTTLASEPQRTYQVVVAATKEMGIGKDGKLPWNLPTDLKFFKDITLTTSDSS 62
Query: 65 KRNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATVENVVICGSIGSALELLAAS 124
K+NAV+MGRKTWESIP+++RPL GRLNVVLTRSG FDIA ENVV C S+ SAL+LLAA
Sbjct: 63 KKNAVVMGRKTWESIPIKYRPLSGRLNVVLTRSGGFDIANTENVVTCSSVDSALDLLAAP 122
Query: 125 PYCLSIEKVFVIGGGQILSEALNAPECDAIHITEIETRIECDTFIPSIDSSVFQPWYSSF 184
PYCLSIE+VFVIGGG IL EALN P CDAIH+TEI+T ++CDTFIP+ID+SV+QPW SSF
Sbjct: 123 PYCLSIERVFVIGGGDILREALNRPSCDAIHLTEIDTSVDCDTFIPAIDTSVYQPWSSSF 182
Query: 185 PIVENNIRYCLSTYVRVRSAAVESLSQNNDIVLDSKTNSDKFEVKQFSFLPKMVFEKHEE 244
P+ EN +R+C +T+VRV+S+A ES ++N + S +F+ K+F FLPKMVF++HEE
Sbjct: 183 PVTENGLRFCFTTFVRVKSSADESSDESNG------SQSLQFDGKKFLFLPKMVFDQHEE 236
Query: 245 YLYLRLVQDIISDGNLKDDRTGTGTLSKFGCQMRYNLRTTFPLLTTKKVFWRGVVEELLW 304
+LYL +V+DIIS+GN+K+DRTGTGTLSKFGCQM++NLR +FPLLTTK+VFWRGVVEELLW
Sbjct: 237 FLYLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRRSFPLLTTKRVFWRGVVEELLW 296
Query: 305 FISGSTNAKVLQEKDIHIWDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMH 364
FISGSTNAKVLQEK IHIWDGNASREYLD +GLT+REEGDLGPVYGFQWRHFGA+YT+MH
Sbjct: 297 FISGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMH 356
Query: 365 ADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSC 424
ADY+GQGFDQL+DVI+KIKNNP+DRRI++SAWNPSDLKLMALPPCHMFAQFY+A GELSC
Sbjct: 357 ADYTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAEGELSC 416
Query: 425 QMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQ 484
QMYQRSADMGLGVPFNIASY+LLTCM+AHVCDL PGDFIHV+GDAHVY+ HVRPL+EQL
Sbjct: 417 QMYQRSADMGLGVPFNIASYSLLTCMLAHVCDLVPGDFIHVLGDAHVYKTHVRPLQEQLL 476
Query: 485 KLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 527
LPKPFP++KINPEKK IDSFVA DF L GYDPH+KIEMKMAV
Sbjct: 477 NLPKPFPVMKINPEKKQIDSFVASDFDLTGYDPHKKIEMKMAV 519
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| TAIR|locus:2139544 THY-2 "thymidylate synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-59 tyms "thymidylate synthase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| MGI|MGI:98878 Tyms "thymidylate synthase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MY63 TYMS "Thymidylate synthase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| RGD|3921 Tyms "thymidylate synthetase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P04818 TYMS "Thymidylate synthase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PU23 TYMS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2TA32 TYMS "Thymidylate synthase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| TAIR|locus:2049389 AT2G21550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P45350 | DRTS_DAUCA | 2, ., 1, ., 1, ., 4, 5 | 0.7840 | 1.0 | 0.9981 | N/A | no |
| P51820 | DRTS_SOYBN | 2, ., 1, ., 1, ., 4, 5 | 0.8204 | 0.9829 | 0.9773 | no | no |
| Q05763 | DRTS2_ARATH | 2, ., 1, ., 1, ., 4, 5 | 0.7620 | 0.9734 | 0.9079 | no | no |
| Q05762 | DRTS1_ARATH | 2, ., 1, ., 1, ., 4, 5 | 0.7609 | 0.9772 | 0.9922 | yes | no |
| P07382 | DRTS_LEIMA | 2, ., 1, ., 1, ., 4, 5 | 0.4523 | 0.8861 | 0.8980 | yes | no |
| O81395 | DRTS_MAIZE | 2, ., 1, ., 1, ., 4, 5 | 0.7764 | 0.9810 | 0.9923 | N/A | no |
| Q2QRX6 | DRTS_ORYSJ | 2, ., 1, ., 1, ., 4, 5 | 0.7611 | 0.9373 | 1.0 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.1.1 | 0.998 |
| 3rd Layer | 1.5.1.3 | 0.994 |
| 3rd Layer | 1.5.1 | 0.998 |
| 4th Layer | 2.1.1.45 | 0.994 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 527 | |||
| PTZ00164 | 514 | PTZ00164, PTZ00164, bifunctional dihydrofolate red | 0.0 | |
| pfam00303 | 262 | pfam00303, Thymidylat_synt, Thymidylate synthase | 1e-164 | |
| PRK01827 | 264 | PRK01827, thyA, thymidylate synthase; Reviewed | 1e-147 | |
| TIGR03284 | 295 | TIGR03284, thym_sym, thymidylate synthase | 1e-131 | |
| COG0207 | 268 | COG0207, ThyA, Thymidylate synthase [Nucleotide tr | 1e-127 | |
| cd00351 | 215 | cd00351, TS_Pyrimidine_HMase, Thymidylate synthase | 1e-118 | |
| PRK13821 | 323 | PRK13821, thyA, thymidylate synthase; Provisional | 4e-63 | |
| cd00209 | 158 | cd00209, DHFR, Dihydrofolate reductase (DHFR) | 1e-60 | |
| pfam00186 | 159 | pfam00186, DHFR_1, Dihydrofolate reductase | 5e-53 | |
| COG0262 | 167 | COG0262, FolA, Dihydrofolate reductase [Coenzyme m | 2e-40 | |
| PRK10769 | 159 | PRK10769, folA, dihydrofolate reductase; Provision | 4e-23 | |
| TIGR03283 | 199 | TIGR03283, thy_syn_methano, thymidylate synthase, | 1e-11 | |
| PRK00956 | 208 | PRK00956, thyA, thymidylate synthase; Provisional | 5e-10 |
| >gnl|CDD|240299 PTZ00164, PTZ00164, bifunctional dihydrofolate reductase-thymidylate synthase; Provisional | Back alignment and domain information |
|---|
Score = 728 bits (1881), Expect = 0.0
Identities = 273/515 (53%), Positives = 349/515 (67%), Gaps = 13/515 (2%)
Query: 20 PKRSYQVVVAATRDMGIGKDGKLPWKLPSDLKFFKEITQIT------SDAGKRNAVIMGR 73
+ + +VVA T GIG LPW +P D+KFF +IT K+NAVIMGR
Sbjct: 6 SLKDFSIVVAVTLKRGIGIGNSLPWHIPEDMKFFSKITTYVREEKYEKSPKKQNAVIMGR 65
Query: 74 KTWESIPLEHRPLPGRLNVVLTRSGSFDIATVENVVICGSIGSALELLAASPYCLSIEKV 133
KTWESIP + RPL R+NVVL+R+ + + A V++ GS+ AL LLA LSIEK+
Sbjct: 66 KTWESIPKKFRPLKNRINVVLSRTLTEEEA-DPGVLVFGSLEDALRLLAED---LSIEKI 121
Query: 134 FVIGGGQILSEALNAPECDAIHITEIETRIECDTFIPSIDSSVFQPWYSSFPIVENNIRY 193
F+IGG + EAL+A D I++T + + ECD F P I S F S N Y
Sbjct: 122 FIIGGASVYREALSANLLDKIYLTRVNSEYECDVFFPKIPESFFIVAIVSQTFSTNGTSY 181
Query: 194 CLSTYVRVRSAAVESLSQNNDIVLDSKTNSDKFEVKQ-FSFLPKMVFEKHEEYLYLRLVQ 252
Y + + L + + T K +Q + P + +HEE+ YL L+
Sbjct: 182 DFVIYEKKNDDEEDLLGKIFGQMK--MTGRKKSPKEQLYKACPSLKIREHEEFQYLDLIA 239
Query: 253 DIISDGNLKDDRTGTGTLSKFGCQMRYNLRTTFPLLTTKKVFWRGVVEELLWFISGSTNA 312
DII +GN+K+DRTG GT+SKFG QMR++LR +FPLLTTKKVF RG++EELLWFI G TN
Sbjct: 240 DIIKNGNVKEDRTGVGTISKFGYQMRFDLRESFPLLTTKKVFLRGIIEELLWFIRGETNG 299
Query: 313 KVLQEKDIHIWDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGF 372
+L +K + IW+GN SRE+LDS GLT REE DLGPVYGFQWRHFGA Y +MH DY+GQG
Sbjct: 300 NLLLDKGVRIWEGNGSREFLDSRGLTHREENDLGPVYGFQWRHFGAEYKDMHDDYTGQGV 359
Query: 373 DQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSAD 432
DQL ++I IKNNP+DRR++L+AWNPS L MALPPCH+ +QFY+ +G+LSC MYQRS D
Sbjct: 360 DQLKNIIETIKNNPDDRRLILTAWNPSALDQMALPPCHLLSQFYVNDGKLSCMMYQRSCD 419
Query: 433 MGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPI 492
MGLGVPFNIASYALLT MIA VC L PG+F+H +GDAHVY NHV L+EQL+++P PFP
Sbjct: 420 MGLGVPFNIASYALLTHMIAQVCGLRPGEFVHFLGDAHVYSNHVDALKEQLERVPYPFPT 479
Query: 493 LKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 527
LK+ E ++I+ F ED ++IGY PH KI+M+MAV
Sbjct: 480 LKLKREVENIEDFTIEDIEVIGYVPHPKIKMEMAV 514
|
Length = 514 |
| >gnl|CDD|215846 pfam00303, Thymidylat_synt, Thymidylate synthase | Back alignment and domain information |
|---|
| >gnl|CDD|234984 PRK01827, thyA, thymidylate synthase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|213790 TIGR03284, thym_sym, thymidylate synthase | Back alignment and domain information |
|---|
| >gnl|CDD|223285 COG0207, ThyA, Thymidylate synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|238211 cd00351, TS_Pyrimidine_HMase, Thymidylate synthase and pyrimidine hydroxymethylase: Thymidylate synthase (TS) and deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs that catalyze analogous alkylation of C5 of pyrimidine nucleotides | Back alignment and domain information |
|---|
| >gnl|CDD|184347 PRK13821, thyA, thymidylate synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238127 cd00209, DHFR, Dihydrofolate reductase (DHFR) | Back alignment and domain information |
|---|
| >gnl|CDD|215777 pfam00186, DHFR_1, Dihydrofolate reductase | Back alignment and domain information |
|---|
| >gnl|CDD|223340 COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|182714 PRK10769, folA, dihydrofolate reductase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|132326 TIGR03283, thy_syn_methano, thymidylate synthase, methanogen type | Back alignment and domain information |
|---|
| >gnl|CDD|179181 PRK00956, thyA, thymidylate synthase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 527 | |||
| PTZ00164 | 514 | bifunctional dihydrofolate reductase-thymidylate s | 100.0 | |
| KOG0673 | 293 | consensus Thymidylate synthase [Nucleotide transpo | 100.0 | |
| TIGR03284 | 296 | thym_sym thymidylate synthase. Members of this pro | 100.0 | |
| PRK13821 | 323 | thyA thymidylate synthase; Provisional | 100.0 | |
| PRK01827 | 264 | thyA thymidylate synthase; Reviewed | 100.0 | |
| COG0207 | 268 | ThyA Thymidylate synthase [Nucleotide transport an | 100.0 | |
| PF00303 | 269 | Thymidylat_synt: Thymidylate synthase; InterPro: I | 100.0 | |
| cd00351 | 215 | TS_Pyrimidine_HMase Thymidylate synthase and pyrim | 100.0 | |
| PRK00956 | 208 | thyA thymidylate synthase; Provisional | 100.0 | |
| TIGR03283 | 199 | thy_syn_methano thymidylate synthase, methanogen t | 100.0 | |
| KOG1324 | 190 | consensus Dihydrofolate reductase [Coenzyme transp | 100.0 | |
| PF00186 | 161 | DHFR_1: Dihydrofolate reductase; InterPro: IPR0017 | 100.0 | |
| PRK10769 | 159 | folA dihydrofolate reductase; Provisional | 100.0 | |
| COG0262 | 167 | FolA Dihydrofolate reductase [Coenzyme metabolism] | 100.0 | |
| cd00209 | 158 | DHFR Dihydrofolate reductase (DHFR). Reduces 7,8-d | 99.97 | |
| PRK00478 | 505 | scpA segregation and condensation protein A/unknow | 99.97 | |
| PF01872 | 200 | RibD_C: RibD C-terminal domain; InterPro: IPR00273 | 99.63 | |
| PRK05625 | 217 | 5-amino-6-(5-phosphoribosylamino)uracil reductase; | 99.41 | |
| TIGR00227 | 216 | ribD_Cterm riboflavin-specific deaminase C-termina | 99.39 | |
| TIGR00326 | 344 | eubact_ribD riboflavin biosynthesis protein RibD. | 99.22 | |
| PRK14059 | 251 | hypothetical protein; Provisional | 99.03 | |
| TIGR01508 | 210 | rib_reduct_arch 2,5-diamino-6-hydroxy-4-(5-phospho | 98.87 | |
| PRK14719 | 360 | bifunctional RNAse/5-amino-6-(5-phosphoribosylamin | 98.62 | |
| COG1985 | 218 | RibD Pyrimidine reductase, riboflavin biosynthesis | 98.46 | |
| PRK10786 | 367 | ribD bifunctional diaminohydroxyphosphoribosylamin | 98.38 | |
| PLN02807 | 380 | diaminohydroxyphosphoribosylaminopyrimidine deamin | 97.66 |
| >PTZ00164 bifunctional dihydrofolate reductase-thymidylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-137 Score=1108.18 Aligned_cols=508 Identities=53% Similarity=0.929 Sum_probs=463.8
Q ss_pred cCCCccCCCCCCceEEEEEEEeCCCeeecCCCCCCCChhhHHHHHHHhhcc------CCCCCCcEEEEccccccccCCCC
Q 009747 10 SNGNVSTQPNPKRSYQVVVAATRDMGIGKDGKLPWKLPSDLKFFKEITQIT------SDAGKRNAVIMGRKTWESIPLEH 83 (527)
Q Consensus 10 ~~~~~~~~~~~mrki~livAvs~dG~IG~~g~lpW~~p~D~~~F~~~T~~~------~~p~~~~~vIMGRkTyeslp~~~ 83 (527)
|||+++ ++++++|+|++.+|+||.+|+|||++|+||+||+++|+++ ++|+++++|||||||||++|...
T Consensus 1 ~~~~~~-----~~~i~lIvA~~~n~~IG~~g~LPW~lpeDlk~Fk~~T~~~~~~~~~~~~~~~~~VIMGRkTyESip~~~ 75 (514)
T PTZ00164 1 SEDYSS-----LKDFSIVVAVTLKRGIGIGNSLPWHIPEDMKFFSKITTYVREEKYEKSPKKQNAVIMGRKTWESIPKKF 75 (514)
T ss_pred Cccccc-----CCCEEEEEEECCCCCeeCCCCCCcCCHHHHHHHHHHhccccccccccccCCCcEEEEcHHHHHhhhhhc
Confidence 566666 6889999999999999999999999999999999999843 47888999999999999998555
Q ss_pred CCCCCCcEEEEcCCCCCCCCCCCCEEEECCHHHHHHHHhcCCCCCCCCcEEEEeCHHHHHHHhcCCCcCEEEEEEECccc
Q 009747 84 RPLPGRLNVVLTRSGSFDIATVENVVICGSIGSALELLAASPYCLSIEKVFVIGGGQILSEALNAPECDAIHITEIETRI 163 (527)
Q Consensus 84 ~pl~~R~niVlSrt~~~~~~~~~~~~v~~sl~eai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~lT~I~~~~ 163 (527)
+|||+|.||||||+.... ...+++.+++|+++|++.+++.. +.++||||||++||++||++++||+++||+|+..+
T Consensus 76 rPLp~R~nIVLSr~~~~~-~~~~~v~v~~sl~eal~~lk~~~---~~~dI~VIGG~~Iy~~~L~~~lvDel~LTvI~~~g 151 (514)
T PTZ00164 76 RPLKNRINVVLSRTLTEE-EADPGVLVFGSLEDALRLLAEDL---SIEKIFIIGGASVYREALSANLLDKIYLTRVNSEY 151 (514)
T ss_pred cccCCCeEEEEcCCCCcc-cCCCCEEEeCCHHHHHHHHhccC---CCCcEEEEchHHHHHHHhcCCCCCEEEEEEEEecc
Confidence 899999999999987531 12356889999999999998641 34789999999999999999999999999997777
Q ss_pred ccCccCCCCCCCCceEeeeecCcccCCccEEEEEEEEcccchhhccccCCccccccCCCCCcccccccccCCcccccChh
Q 009747 164 ECDTFIPSIDSSVFQPWYSSFPIVENNIRYCLSTYVRVRSAAVESLSQNNDIVLDSKTNSDKFEVKQFSFLPKMVFEKHE 243 (527)
Q Consensus 164 ~gd~fFP~~~~~~f~l~~~~~~~~e~~~~~~f~~Y~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (527)
+||+|||.++.+.|++++.+....++++.|+|++|+|+..++.+. ..+.....+.++.+.-+....|.++|+.++++|+
T Consensus 152 eGD~~FP~~~~~~~~l~~~s~~~~~~~v~y~f~~y~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (514)
T PTZ00164 152 ECDVFFPKIPESFFIVAIVSQTFSTNGTSYDFVIYEKKNDDEEDL-LGKIFGQMKMTGRKKSPKEQLYKACPSLKIREHE 230 (514)
T ss_pred ccCccCCCCCchhcEEEEEEEeccCCCceEEEEEEeccCcchhcc-ccccccccccccccccccccccccCccccccCCc
Confidence 999999999887899887555556788999999999986444333 2222233333443333333668899999999999
Q ss_pred HHHHHHHHHHHHHcCccccCCCCceeeeeccceeEEeCCCCCcccccccccccchHhHHHHHHhCCCChhHhhhcCcccc
Q 009747 244 EYLYLRLVQDIISDGNLKDDRTGTGTLSKFGCQMRYNLRTTFPLLTTKKVFWRGVVEELLWFISGSTNAKVLQEKDIHIW 323 (527)
Q Consensus 244 ~~~Yl~l~~~Il~~G~~~~dRtg~~t~~i~g~~~~~dl~~~fP~lT~kk~~~k~~~~EllW~l~G~~~~~~l~~~~~~iW 323 (527)
|+||+++|++||++|+.+.||||+||+++||++|||||+++||++||||++||++++||||||+|+||+++|++.||+||
T Consensus 231 ~~~Yl~l~~~Il~~G~~~~~rtG~~t~s~fg~~~r~dl~~~fPllTtkk~~~k~~~~EllWfl~g~tn~~~l~~~~~~iW 310 (514)
T PTZ00164 231 EFQYLDLIADIIKNGNVKEDRTGVGTISKFGYQMRFDLRESFPLLTTKKVFLRGIIEELLWFIRGETNGNLLLDKGVRIW 310 (514)
T ss_pred HHHHHHHHHHHHHhCCcCCCCCCCceeeecCceEEEeCCCCCceeeechhhHHHHHHHHHHHHhCCccHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccchhhhhhcCCCCCCCCCCCCcccccccccccccccccCCCCCCCchHHHHHHHHHhcCCCCcceEEEeeCcccccc
Q 009747 324 DGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKL 403 (527)
Q Consensus 324 d~~~~~~~~~~~~~~~~~~g~lG~~YG~~wR~~~~~~~~~~~~~~~~~~dQl~~vi~~Lk~~p~sRR~i~~~w~p~~~~~ 403 (527)
|+|++++|+++.+++++++|||||+||+|||+||+.|.+|+++|+++++|||++||++||+||+|||+|+++|||.++++
T Consensus 311 d~w~~~~~~~~~~~~~~~~gdlGp~YG~qwr~~~~~~~~~~~~~~g~~~dQl~~vi~~Lk~~p~sRR~i~~~wn~~d~~~ 390 (514)
T PTZ00164 311 EGNGSREFLDSRGLTHREENDLGPVYGFQWRHFGAEYKDMHDDYTGQGVDQLKNIIETIKNNPDDRRLILTAWNPSALDQ 390 (514)
T ss_pred CCCcccchhcccccccccCCCcccchhhhhhccccccccccccccCCcccHHHHHHHHHhcCCcchheEEEEECHhHhcc
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEeCCeEEEEEEeecccccccccccHHHHHHHHHHHHHhcCCcceeEEEEECcccccccchhhHHHHh
Q 009747 404 MALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQL 483 (527)
Q Consensus 404 ~~l~PC~~~~qf~vr~g~L~~~~~~RS~D~~~g~p~Ni~~~~~L~~~iA~~~g~~~G~~~~~~~~~HIY~~h~~~~~~~l 483 (527)
|+|||||+++||+|++|+|+|++||||||+++|+|||+++|++||+|||++||+++|+|+|+++|+|||+||++++++||
T Consensus 391 ~~l~PC~~~~qf~v~~g~L~~~~~qRS~D~~lG~pfNi~~ya~L~~~iA~~~gl~~G~~~h~~g~~HIY~~h~~~~~~ql 470 (514)
T PTZ00164 391 MALPPCHLLSQFYVNDGKLSCMMYQRSCDMGLGVPFNIASYALLTHMIAQVCGLRPGEFVHFLGDAHVYSNHVDALKEQL 470 (514)
T ss_pred cCCCCCceEEEEEEeCCEEEEEEEEehhhhhhcchhhHHHHHHHHHHHHHHhCCEeeEEEEEeccceeehhhHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCeEEeCCCCCCCCCcccCCeEEeCCCCCCCCCccccC
Q 009747 484 QKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 527 (527)
Q Consensus 484 ~r~p~~~p~l~~~~~~~~~~d~~~~df~l~~Y~~~~~i~~~~av 527 (527)
+|+|+++|+|+||+++++|+||+++||+|+||+|||+||+||||
T Consensus 471 ~r~p~~~P~l~i~~~~~~~~d~~~~Df~l~~Y~~~p~i~~~~av 514 (514)
T PTZ00164 471 ERVPYPFPTLKLKREVENIEDFTIEDIEVIGYVPHPKIKMEMAV 514 (514)
T ss_pred cCCCCCCCeEEECCCCCccccCChhHEEEeCCCCCCcCCccccC
Confidence 99999999999999999999999999999999999999999997
|
|
| >KOG0673 consensus Thymidylate synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03284 thym_sym thymidylate synthase | Back alignment and domain information |
|---|
| >PRK13821 thyA thymidylate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK01827 thyA thymidylate synthase; Reviewed | Back alignment and domain information |
|---|
| >COG0207 ThyA Thymidylate synthase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF00303 Thymidylat_synt: Thymidylate synthase; InterPro: IPR000398 Thymidylate synthase (2 | Back alignment and domain information |
|---|
| >cd00351 TS_Pyrimidine_HMase Thymidylate synthase and pyrimidine hydroxymethylase: Thymidylate synthase (TS) and deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs that catalyze analogous alkylation of C5 of pyrimidine nucleotides | Back alignment and domain information |
|---|
| >PRK00956 thyA thymidylate synthase; Provisional | Back alignment and domain information |
|---|
| >TIGR03283 thy_syn_methano thymidylate synthase, methanogen type | Back alignment and domain information |
|---|
| >KOG1324 consensus Dihydrofolate reductase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
| >PF00186 DHFR_1: Dihydrofolate reductase; InterPro: IPR001796 Dihydrofolate reductase (DHFR) (1 | Back alignment and domain information |
|---|
| >PRK10769 folA dihydrofolate reductase; Provisional | Back alignment and domain information |
|---|
| >COG0262 FolA Dihydrofolate reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >cd00209 DHFR Dihydrofolate reductase (DHFR) | Back alignment and domain information |
|---|
| >PRK00478 scpA segregation and condensation protein A/unknown domain fusion protein; Provisional | Back alignment and domain information |
|---|
| >PF01872 RibD_C: RibD C-terminal domain; InterPro: IPR002734 This domain is found in the C terminus of the bifunctional deaminase-reductase of Escherichia coli, Bacillus subtilis and other bacteria in combination with IPR002125 from INTERPRO that catalyses the second and third steps in the biosynthesis of riboflavin, i | Back alignment and domain information |
|---|
| >PRK05625 5-amino-6-(5-phosphoribosylamino)uracil reductase; Validated | Back alignment and domain information |
|---|
| >TIGR00227 ribD_Cterm riboflavin-specific deaminase C-terminal domain | Back alignment and domain information |
|---|
| >TIGR00326 eubact_ribD riboflavin biosynthesis protein RibD | Back alignment and domain information |
|---|
| >PRK14059 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01508 rib_reduct_arch 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal | Back alignment and domain information |
|---|
| >PRK14719 bifunctional RNAse/5-amino-6-(5-phosphoribosylamino)uracil reductase; Provisional | Back alignment and domain information |
|---|
| >COG1985 RibD Pyrimidine reductase, riboflavin biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK10786 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; Provisional | Back alignment and domain information |
|---|
| >PLN02807 diaminohydroxyphosphoribosylaminopyrimidine deaminase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 527 | ||||
| 2h2q_A | 521 | Crystal Structure Of Trypanosoma Cruzi Dihydrofolat | 1e-135 | ||
| 3inv_A | 521 | Trypanosoma Cruzi Dihydrofolate Reductase-Thymidyla | 1e-135 | ||
| 3dl6_A | 521 | Crystal Structure Of The A287fS290G ACTIVE SITE MUT | 1e-125 | ||
| 3dl5_A | 521 | Crystal Structure Of The A287f Active Site Mutant O | 1e-124 | ||
| 2oip_A | 519 | Crystal Structure Of The S290g Active Site Mutant O | 1e-124 | ||
| 1qzf_A | 521 | Crystal Structure Of Dhfr-Ts From Cryptosporidium H | 1e-123 | ||
| 3hj3_A | 521 | Crystal Structure Of The Chts-Dhfr F207a Non-Active | 1e-123 | ||
| 3um5_A | 608 | Double Mutant (A16v+s108t) Plasmodium Falciparum Di | 1e-122 | ||
| 3jsu_A | 608 | Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium | 1e-122 | ||
| 3qgt_A | 608 | Crystal Structure Of Wild-Type Pfdhfr-Ts Complexed | 1e-122 | ||
| 3i3r_A | 511 | X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE | 1e-118 | ||
| 3nrr_A | 515 | Co-Crystal Structure Of Dihydrofolate Reductase-Thy | 1e-118 | ||
| 3ihi_A | 307 | Crystal Structure Of Mouse Thymidylate Synthase Len | 1e-116 | ||
| 3eaw_X | 313 | Replacement Of Val3 In Human Thymidylate Synthase A | 1e-116 | ||
| 1rts_A | 307 | Thymidylate Synthase From Rat In Ternary Complex Wi | 1e-116 | ||
| 1hw4_A | 355 | Structure Of Thymidylate Synthase Suggests Advantag | 1e-116 | ||
| 1hvy_A | 288 | Human Thymidylate Synthase Complexed With Dump And | 1e-116 | ||
| 2rd8_A | 313 | Human Thymidylate Synthase Stabilized In Active Con | 1e-116 | ||
| 3gh2_X | 313 | Replacement Of Val3 In Human Thymidylate Synthase A | 1e-116 | ||
| 1ju6_A | 313 | Human Thymidylate Synthase Complex With Dump And Ly | 1e-116 | ||
| 3ef9_A | 313 | Replacement Of Val3 In Human Thymidylate Synthase A | 1e-116 | ||
| 3gg5_A | 313 | Replacement Of Val3 In Human Thymidylate Synthase A | 1e-116 | ||
| 3edw_X | 313 | Replacement Of Val3 In Human Thymidylate Synthase A | 1e-116 | ||
| 4gyh_A | 318 | Structure Of Human Thymidylate Synthase At High Sal | 1e-116 | ||
| 3ed7_A | 295 | Replacement Of Val3 In Human Thymidylate Synthase A | 1e-115 | ||
| 3n5g_A | 325 | Crystal Structure Of Histidine-Tagged Human Thymidy | 1e-115 | ||
| 3n5e_A | 325 | Crystal Structure Of Human Thymidylate Synthase Bou | 1e-115 | ||
| 1hw3_A | 313 | Structure Of Human Thymidylate Synthase Suggests Ad | 1e-115 | ||
| 3ehi_X | 313 | Crystal Structure Of Human Thymidyalte Synthase M19 | 1e-115 | ||
| 3ebu_A | 313 | Replacement Of Val3 In Human Thymidylate Synthase A | 1e-115 | ||
| 3n5e_B | 325 | Crystal Structure Of Human Thymidylate Synthase Bou | 1e-115 | ||
| 1hzw_A | 290 | Crystal Structure Of Human Thymidylate Synthase Len | 1e-115 | ||
| 4e28_A | 325 | Structure Of Human Thymidylate Synthase In Inactive | 1e-115 | ||
| 2rd8_B | 313 | Human Thymidylate Synthase Stabilized In Active Con | 1e-115 | ||
| 3egy_X | 313 | Crystal Structure Of Human Thymidyalte Synthase A19 | 1e-115 | ||
| 1ci7_A | 297 | Ternary Complex Of Thymidylate Synthase From Pneumo | 1e-109 | ||
| 1j3i_C | 328 | Wild-Type Plasmodium Falciparum Dihydrofolate Reduc | 1e-102 | ||
| 2aaz_B | 317 | Cryptococcus Neoformans Thymidylate Synthase Comple | 2e-98 | ||
| 3kgb_A | 294 | Crystal Structure Of Thymidylate Synthase 12 FROM E | 2e-97 | ||
| 3ix6_A | 360 | Crystal Structure Of Thymidylate Synthase Thya From | 1e-78 | ||
| 3uwl_A | 315 | Crystal Structure Of Enteroccocus Faecalis Thymidyl | 7e-76 | ||
| 3uwl_B | 315 | Crystal Structure Of Enteroccocus Faecalis Thymidyl | 1e-74 | ||
| 1kce_A | 264 | E. Coli Thymidylate Synthase Mutant E58q In Complex | 6e-74 | ||
| 1tlc_A | 265 | Thymidylate Synthase Complexed With Dgmp And Folate | 7e-74 | ||
| 2bbq_A | 264 | Structural Basis For Recognition Of Polyglutamyl Fo | 7e-74 | ||
| 2tsc_A | 264 | Structure, Multiple Site Binding, And Segmental Acc | 1e-73 | ||
| 1f4g_A | 264 | Crystal Structure Of E. Coli Thymidylate Synthase C | 1e-73 | ||
| 2vf0_A | 264 | Crystal Structure Of The Thymidylate Synthase K48q | 1e-73 | ||
| 1zpr_A | 264 | E. Coli Thymidylate Synthase Mutant E58q In Complex | 2e-73 | ||
| 2vet_A | 264 | Crystal Structure Of The Thymidylate Synthase K48q | 2e-73 | ||
| 2ftn_A | 264 | E. Coli Thymidylate Synthase Y94f Mutant Length = 2 | 2e-73 | ||
| 1ffl_A | 264 | Crystal Structure Of The Apo-Thymidylate Synthase R | 2e-73 | ||
| 2g8m_B | 264 | Escherichia Coli Thymidylate Synthase Y209w In Comp | 2e-73 | ||
| 1dna_A | 264 | D221(169)n Mutant Does Not Promote Opening Of The C | 2e-73 | ||
| 1aiq_A | 264 | Crystal Structure Of Thymidylate Synthase R126e Mut | 3e-73 | ||
| 1bq1_A | 264 | E. Coli Thymidylate Synthase Mutant N177a In Comple | 4e-73 | ||
| 3bfi_A | 264 | E. Coli Thymidylate Synthase Y209m Mutant Complexed | 5e-73 | ||
| 1jg0_A | 264 | Crystal Structure Of Escherichia Coli Thymidylate S | 6e-73 | ||
| 1nce_A | 264 | Crystal Structure Of A Ternary Complex Of E. Coli T | 7e-73 | ||
| 3bgx_A | 264 | E. Coli Thymidylate Synthase C146s Mutant Complexed | 8e-73 | ||
| 1evg_A | 264 | Crystal Structure Analysis Of Cys167 Mutant Of Esch | 2e-72 | ||
| 1kzj_A | 264 | Crystal Structure Of Ects W80g/dump/cb3717 Complex | 2e-72 | ||
| 1ev5_A | 264 | Crystal Structure Analysis Of Ala167 Mutant Of Esch | 2e-72 | ||
| 1lca_A | 316 | Lactobacillus Casei Thymidylate Synthase Ternary Co | 2e-72 | ||
| 1f4d_A | 264 | Crystal Structure Of E. Coli Thymidylate Synthase C | 3e-72 | ||
| 1vzb_A | 316 | L. Casei Thymidylate Synthase Mutant E60q Binary Co | 5e-72 | ||
| 1tsy_A | 316 | Thymidylate Synthase R179k Mutant Length = 316 | 6e-72 | ||
| 1vza_A | 316 | Thymidylate Synthase E60d Mutant Binary Complex Wit | 6e-72 | ||
| 2g86_A | 316 | L. Casei Thymidylate Synthase Y261f In Complex With | 6e-72 | ||
| 1tda_A | 315 | Structures Of Thymidylate Synthase With A C-Termina | 7e-72 | ||
| 1njc_A | 316 | Thymidylate Synthase, Mutation, N229d With 2'-Deoxy | 8e-72 | ||
| 2g8d_A | 316 | Lactobacillus Casei Thymidylate Synthase Y261w-dump | 8e-72 | ||
| 1jmi_A | 316 | Contributions Of Orientation And Hydrogen Bonding T | 1e-71 | ||
| 1tsx_A | 316 | Thymidylate Synthase R179e Mutant Length = 316 | 1e-71 | ||
| 1bo7_A | 316 | Thymidylate Synthase R179t Mutant Length = 316 | 1e-71 | ||
| 1bo8_A | 316 | Thymidylate Synthase R178t Mutant Length = 316 | 1e-71 | ||
| 1jmg_A | 316 | Contributions Of Orientation And Hydrogen Bonding T | 1e-71 | ||
| 1tsv_A | 316 | Thymidylate Synthase R179a Mutant Length = 316 | 1e-71 | ||
| 1jmf_A | 316 | Contributions Of Orientation And Hydrogen Bonding T | 2e-71 | ||
| 2g8a_A | 316 | Lactobacillus Casei Y261m In Complex With Substrate | 2e-71 | ||
| 2g89_A | 316 | L. Casei Thymidylate Synthase Y261a In Complex With | 2e-71 | ||
| 1evf_A | 264 | Crystal Structure Analysis Of Cys167 Mutant Of Esch | 3e-71 | ||
| 1bp0_A | 316 | Thymidylate Synthase R23i Mutant Length = 316 | 3e-71 | ||
| 1jmh_A | 316 | Contributions Of Orientation And Hydrogen Bonding T | 3e-71 | ||
| 1nja_A | 316 | Thymidylate Synthase, Mutation, N229c With 2'-deoxy | 4e-71 | ||
| 1ev8_A | 264 | Crystal Structure Analysis Of Cys167 Mutant Of Esch | 7e-71 | ||
| 1bpj_A | 316 | Thymidylate Synthase R178t, R179t Double Mutant Len | 8e-71 | ||
| 1qqq_A | 264 | Crystal Structure Analysis Of Ser254 Mutant Of Esch | 9e-71 | ||
| 1bp6_A | 316 | Thymidylate Synthase R23i, R179t Double Mutant Leng | 1e-70 | ||
| 4dq1_A | 321 | Thymidylate Synthase From Staphylococcus Aureus. Le | 3e-68 | ||
| 3qj7_A | 264 | Crystal Structure Of The Mycobacterium Tuberculosis | 7e-68 | ||
| 1tis_A | 286 | Crystal Structure Of Thymidylate Synthase From T4 P | 6e-64 | ||
| 4f2v_A | 272 | Crystal Structure Of De Novo Designed Serine Hydrol | 5e-63 | ||
| 1b02_A | 279 | Crystal Structure Of Thymidylate Synthase A From Ba | 3e-43 | ||
| 1bko_A | 278 | Thermostable Thymidylate Synthase A From Bacillus S | 3e-43 | ||
| 3v8h_A | 327 | Crystal Structure Of Thymidylate Synthase From Burk | 4e-43 | ||
| 1cd2_A | 206 | Ligand Induced Conformational Changes In The Crysta | 4e-29 | ||
| 1vj3_A | 205 | Structural Studies On Bio-Active Compounds. Crystal | 5e-29 | ||
| 1ai9_A | 192 | Candida Albicans Dihydrofolate Reductase Length = 1 | 1e-28 | ||
| 3ro9_A | 225 | Candida Glabrata Dihydrofolate Reductase Complexed | 2e-25 | ||
| 3cse_A | 227 | Candida Glabrata Dihydrofolate Reductase Complexed | 2e-25 | ||
| 2fzj_A | 186 | New Insights Into Dhfr Interactions: Analysis Of Pn | 2e-25 | ||
| 3k45_A | 186 | Alternate Binding Modes Observed For The E- And Z-I | 3e-25 | ||
| 1dr1_A | 189 | 2.2 Angstroms Crystal Structure Of Chicken Liver Di | 4e-25 | ||
| 3f8y_A | 187 | Correlations Of Human Dihydrofolate Reductase With | 4e-25 | ||
| 3l3r_A | 186 | Structural, Computational And Kinetic Data For Anti | 4e-25 | ||
| 3rg9_A | 240 | Trypanosoma Brucei Dihydrofolate Reductase (Tbdhfr) | 7e-25 | ||
| 3qfx_A | 241 | Trypanosoma Brucei Dihydrofolate Reductase Pyrimeth | 8e-25 | ||
| 3ghv_A | 186 | Human Dihydrofolate Reductase Q35kN64F DOUBLE MUTAN | 8e-25 | ||
| 1mvs_A | 187 | Analysis Of Two Polymorphic Forms Of A Pyrido[2,3- | 1e-24 | ||
| 1dhf_A | 186 | Crystal Structures Of Recombinant Human Dihydrofola | 1e-24 | ||
| 1u70_A | 186 | Understanding The Role Of Leu22 Variants In Methotr | 1e-24 | ||
| 3nxo_A | 186 | Perferential Selection Of Isomer Binding From Chira | 2e-24 | ||
| 3eig_A | 186 | Crystal Structure Of A Methotrexate-Resistant Mutan | 2e-24 | ||
| 1hfq_A | 186 | Comparison Of Ternary Crystal Complexes Of Human Di | 3e-24 | ||
| 3f8z_A | 187 | Human Dihydrofolate Reductase Structural Data With | 3e-24 | ||
| 1dlr_A | 186 | Methotrexate-Resistant Variants Of Human Dihydrofol | 3e-24 | ||
| 3f91_A | 187 | Structural Data For Human Active Site Mutant Enzyme | 3e-24 | ||
| 1boz_A | 186 | Structure-Based Design And Synthesis Of Lipophilic | 3e-24 | ||
| 3ghc_A | 186 | Design, Synthesis, And X-Ray Crystal Structure Of C | 3e-24 | ||
| 3oaf_A | 186 | Structural And Kinetic Data For Antifolate Interact | 4e-24 | ||
| 1dls_A | 186 | Methotrexate-Resistant Variants Of Human Dihydrofol | 4e-24 | ||
| 1u71_A | 186 | Understanding The Role Of Leu22 Variants In Methotr | 6e-24 | ||
| 3jw3_A | 168 | Crystal Structure Of Bacillus Anthracis (F96i) Dihy | 6e-20 | ||
| 3jw5_A | 168 | Crystal Structure Of Bacillus Anthracis (Y102f) Dih | 1e-19 | ||
| 3fl8_A | 166 | Crystal Structure Of B. Anthracis Dihydrofolate Red | 2e-19 | ||
| 3e0b_A | 166 | Bacillus Anthracis Dihydrofolate Reductase Complexe | 9e-19 | ||
| 3s9u_A | 165 | Bacillus Anthracis Dihydrofolate Reductase Bound To | 1e-18 | ||
| 2kgk_A | 172 | Solution Structure Of Bacillus Anthracis Dihydrofol | 1e-18 | ||
| 3jvx_A | 168 | Crystal Structure Of Bacillus Anthracis Dihydrofola | 1e-18 | ||
| 2qk8_A | 162 | Crystal Structure Of The Anthrax Drug Target, Bacil | 1e-18 | ||
| 1df7_A | 159 | Dihydrofolate Reductase Of Mycobacterium Tuberculos | 3e-18 | ||
| 2w3v_A | 167 | Mycobacterium Avium Dihydrofolate Reductase Complex | 6e-18 | ||
| 1j3j_A | 280 | Double Mutant (C59r+s108n) Plasmodium Falciparum Di | 9e-18 | ||
| 2cig_A | 159 | Dihydrofolate Reductase From Mycobacterium Tubercul | 1e-17 | ||
| 1j3k_A | 280 | Quadruple Mutant (n51i+c59r+s108n+i164l) Plasmodium | 2e-17 | ||
| 1j3i_A | 280 | Wild-Type Plasmodium Falciparum Dihydrofolate Reduc | 3e-17 | ||
| 1zdr_A | 164 | Dhfr From Bacillus Stearothermophilus Length = 164 | 5e-17 | ||
| 1dds_A | 159 | Molecule: Dihydrofolate Reductase (E.C.1.5.1.3) Com | 1e-16 | ||
| 2inq_B | 159 | Neutron Crystal Structure Of Escherichia Coli Dihyd | 2e-16 | ||
| 4dfr_A | 159 | Crystal Structures Of Escherichia Coli And Lactobac | 2e-16 | ||
| 3drc_A | 159 | Investigation Of The Functional Role Of Tryptophan- | 2e-16 | ||
| 3ia4_A | 162 | Moritella Profunda Dihydrofolate Reductase (Dhfr) I | 2e-16 | ||
| 2zza_A | 162 | Moritella Profunda Dihydrofolate Reductase Complex | 2e-16 | ||
| 3q1h_A | 163 | Crystal Structure Of Dihydrofolate Reductase From Y | 5e-16 | ||
| 1dra_A | 159 | Crystal Structure Of Unliganded Escherichia Coli Di | 6e-16 | ||
| 2d0k_A | 159 | Methionine-Free Mutant Of Escherichia Coli Dihydrof | 7e-16 | ||
| 1dhi_A | 159 | Long-Range Structural Effects In A Second-Site Reve | 1e-15 | ||
| 2drc_A | 159 | Investigation Of The Functional Role Of Tryptophan- | 3e-15 | ||
| 1drb_A | 159 | Crystal Structure Of Unliganded Escherichia Coli Di | 3e-15 | ||
| 1dhj_A | 159 | Long-Range Structural Effects In A Second-Site Reve | 3e-15 | ||
| 3lg4_A | 168 | Staphylococcus Aureus V31y, F92i Mutant Dihydrofola | 5e-15 | ||
| 3ql0_A | 160 | Crystal Structure Of N23ppS148A MUTANT OF E. COLI D | 6e-15 | ||
| 2w9s_A | 161 | Staphylococcus Aureus S1:dhfr In Complex With Trime | 1e-14 | ||
| 2bla_A | 238 | Sp21 Double Mutant P. Vivax Dihydrofolate Reductase | 1e-14 | ||
| 3tq8_A | 178 | Structure Of The Dihydrofolate Reductase (Fola) Fro | 2e-14 | ||
| 2bl9_A | 238 | X-Ray Crystal Structure Of Plasmodium Vivax Dihydro | 2e-14 | ||
| 3ix9_A | 190 | Crystal Structure Of Streptococcus Pneumoniae Dihyd | 4e-14 | ||
| 2w9g_A | 159 | Wild-Type Staphylococcus Aureus Dhfr In Complex Wit | 5e-14 | ||
| 3sqy_X | 167 | S. Aureus Dihydrofolate Reductase Complexed With No | 5e-14 | ||
| 3sgy_A | 167 | Staphylococcus Aureus Dihydrofolate Reductase Compl | 5e-14 | ||
| 3sr5_X | 166 | S. Aureus Dihydrofolate Reductase Complexed With No | 5e-14 | ||
| 3fyv_X | 158 | Staph. Aureus Dhfr Complexed With Nadph And Ar-102 | 5e-14 | ||
| 3f0b_X | 157 | Staphylococcus Aureus Dihydrofolate Reductase Compl | 5e-14 | ||
| 4fgg_A | 163 | S. Aureus Dihydrofolate Reductase Co-crystallized W | 6e-14 | ||
| 3m08_A | 161 | Wild Type Dihydrofolate Reductase From Staphylococc | 6e-14 | ||
| 3fy8_X | 158 | Crystal Structure Of Staph. Aureus Dhfr Complexed W | 7e-14 | ||
| 3f0u_X | 157 | Staphylococcus Aureus F98y Mutant Dihydrofolate Red | 7e-14 | ||
| 3m09_A | 161 | F98y Tmp-Resistant Dihydrofolate Reductase From Sta | 9e-14 | ||
| 3i8a_X | 157 | Staphylococcus Aureus H30n, F98y Dihydrofolate Redu | 1e-13 | ||
| 1lud_A | 162 | Solution Structure Of Dihydrofolate Reductase Compl | 4e-10 | ||
| 1vdr_A | 162 | Dihydrofolate Reductase Length = 162 | 6e-10 | ||
| 2jyb_A | 162 | Binary Hvdhfr1:folate Complex Length = 162 | 9e-10 | ||
| 3dfr_A | 162 | Crystal Structures Of Escherichia Coli And Lactobac | 9e-10 | ||
| 1cz3_A | 168 | Dihydrofolate Reductase From Thermotoga Maritima Le | 3e-06 |
| >pdb|2H2Q|A Chain A, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate Reductase- Thymidylate Synthase Length = 521 | Back alignment and structure |
|
| >pdb|3INV|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph, Dump And C-448 Antifolate Length = 521 | Back alignment and structure |
| >pdb|3DL6|A Chain A, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis Length = 521 | Back alignment and structure |
| >pdb|3DL5|A Chain A, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis Length = 521 | Back alignment and structure |
| >pdb|2OIP|A Chain A, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis Length = 519 | Back alignment and structure |
| >pdb|1QZF|A Chain A, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis Length = 521 | Back alignment and structure |
| >pdb|3HJ3|A Chain A, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site Mut Length = 521 | Back alignment and structure |
| >pdb|3UM5|A Chain A, Double Mutant (A16v+s108t) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts-T994) COMPLEXED WITH Pyrimethamine, Nadph, And Dump Length = 608 | Back alignment and structure |
| >pdb|3JSU|A Chain A, Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase(Pfdhfr-Ts) Complexed With Qn254, Nadph, And Dump Length = 608 | Back alignment and structure |
| >pdb|3QGT|A Chain A, Crystal Structure Of Wild-Type Pfdhfr-Ts Complexed With Nadph, Dump And Pyrimethamine Length = 608 | Back alignment and structure |
| >pdb|3I3R|A Chain A, X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE SYNTHASE FROM Babesia Bovis At 2.35a Resolution Length = 511 | Back alignment and structure |
| >pdb|3NRR|A Chain A, Co-Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Babesia Bovis With Dump, Raltitrexed And Nadp Length = 515 | Back alignment and structure |
| >pdb|3IHI|A Chain A, Crystal Structure Of Mouse Thymidylate Synthase Length = 307 | Back alignment and structure |
| >pdb|3EAW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 | Back alignment and structure |
| >pdb|1RTS|A Chain A, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex Length = 307 | Back alignment and structure |
| >pdb|1HW4|A Chain A, Structure Of Thymidylate Synthase Suggests Advantages Of Chemotherapy With Noncompetitive Inhibitors Length = 355 | Back alignment and structure |
| >pdb|1HVY|A Chain A, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation Length = 288 | Back alignment and structure |
| >pdb|2RD8|A Chain A, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 Length = 313 | Back alignment and structure |
| >pdb|3GH2|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 | Back alignment and structure |
| >pdb|1JU6|A Chain A, Human Thymidylate Synthase Complex With Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate Length = 313 | Back alignment and structure |
| >pdb|3EF9|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 | Back alignment and structure |
| >pdb|3GG5|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 | Back alignment and structure |
| >pdb|3EDW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 | Back alignment and structure |
| >pdb|4GYH|A Chain A, Structure Of Human Thymidylate Synthase At High Salt Conditions Length = 318 | Back alignment and structure |
| >pdb|3ED7|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 295 | Back alignment and structure |
| >pdb|3N5G|A Chain A, Crystal Structure Of Histidine-Tagged Human Thymidylate Synthase Length = 325 | Back alignment and structure |
| >pdb|3N5E|A Chain A, Crystal Structure Of Human Thymidylate Synthase Bound To A Peptide Inhibitor Length = 325 | Back alignment and structure |
| >pdb|1HW3|A Chain A, Structure Of Human Thymidylate Synthase Suggests Advantages Of Chemotherapy With Noncompetitive Inhibitors Length = 313 | Back alignment and structure |
| >pdb|3EHI|X Chain X, Crystal Structure Of Human Thymidyalte Synthase M190k With Loop 181- 197 Stabilized In The Inactive Conformation Length = 313 | Back alignment and structure |
| >pdb|3EBU|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 | Back alignment and structure |
| >pdb|3N5E|B Chain B, Crystal Structure Of Human Thymidylate Synthase Bound To A Peptide Inhibitor Length = 325 | Back alignment and structure |
| >pdb|1HZW|A Chain A, Crystal Structure Of Human Thymidylate Synthase Length = 290 | Back alignment and structure |
| >pdb|4E28|A Chain A, Structure Of Human Thymidylate Synthase In Inactive Conformation With A Novel Non-Peptidic Inhibitor Length = 325 | Back alignment and structure |
| >pdb|2RD8|B Chain B, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 Length = 313 | Back alignment and structure |
| >pdb|3EGY|X Chain X, Crystal Structure Of Human Thymidyalte Synthase A191k With Loop 181- 197 Stabilized In The Inactive Conformation Length = 313 | Back alignment and structure |
| >pdb|1CI7|A Chain A, Ternary Complex Of Thymidylate Synthase From Pneumocystis Carinii Length = 297 | Back alignment and structure |
| >pdb|1J3I|C Chain C, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump Length = 328 | Back alignment and structure |
| >pdb|3KGB|A Chain A, Crystal Structure Of Thymidylate Synthase 12 FROM ENCEPHALITOZOON Cuniculi At 2.2 A Resolution Length = 294 | Back alignment and structure |
| >pdb|3IX6|A Chain A, Crystal Structure Of Thymidylate Synthase Thya From Brucella Melitensis Length = 360 | Back alignment and structure |
| >pdb|3UWL|A Chain A, Crystal Structure Of Enteroccocus Faecalis Thymidylate Synthase (efts) In Complex With 5-formyl Tetrahydrofolate Length = 315 | Back alignment and structure |
| >pdb|3UWL|B Chain B, Crystal Structure Of Enteroccocus Faecalis Thymidylate Synthase (efts) In Complex With 5-formyl Tetrahydrofolate Length = 315 | Back alignment and structure |
| >pdb|1KCE|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 264 | Back alignment and structure |
| >pdb|1TLC|A Chain A, Thymidylate Synthase Complexed With Dgmp And Folate Analog 1843u89 Length = 265 | Back alignment and structure |
| >pdb|2BBQ|A Chain A, Structural Basis For Recognition Of Polyglutamyl Folates By Thymidylate Synthase Length = 264 | Back alignment and structure |
| >pdb|2TSC|A Chain A, Structure, Multiple Site Binding, And Segmental Accomodation In Thymidylate Synthase On Binding DUMP AND An Anti-Folate Length = 264 | Back alignment and structure |
| >pdb|1F4G|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Sp- 876 Length = 264 | Back alignment and structure |
| >pdb|2VF0|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q Complexed With 5no2dump And Bw1843u89 Length = 264 | Back alignment and structure |
| >pdb|1ZPR|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 264 | Back alignment and structure |
| >pdb|2VET|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q Complexed With Dump Length = 264 | Back alignment and structure |
| >pdb|2FTN|A Chain A, E. Coli Thymidylate Synthase Y94f Mutant Length = 264 | Back alignment and structure |
| >pdb|1FFL|A Chain A, Crystal Structure Of The Apo-Thymidylate Synthase R166q Mutant Length = 264 | Back alignment and structure |
| >pdb|1DNA|A Chain A, D221(169)n Mutant Does Not Promote Opening Of The Cofactor Imidazolidine Ring Length = 264 | Back alignment and structure |
| >pdb|1AIQ|A Chain A, Crystal Structure Of Thymidylate Synthase R126e Mutant Length = 264 | Back alignment and structure |
| >pdb|1BQ1|A Chain A, E. Coli Thymidylate Synthase Mutant N177a In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 264 | Back alignment and structure |
| >pdb|3BFI|A Chain A, E. Coli Thymidylate Synthase Y209m Mutant Complexed With 5-nitro-dump Length = 264 | Back alignment and structure |
| >pdb|1JG0|A Chain A, Crystal Structure Of Escherichia Coli Thymidylate Synthase Complexed With 2'-Deoxyuridine-5'-Monophosphate And N,O-Didansyl-L-Tyrosine Length = 264 | Back alignment and structure |
| >pdb|1NCE|A Chain A, Crystal Structure Of A Ternary Complex Of E. Coli Thymidylate Synthase D169c With Dump And The Antifolate Cb3717 Length = 264 | Back alignment and structure |
| >pdb|3BGX|A Chain A, E. Coli Thymidylate Synthase C146s Mutant Complexed With Dtmp And Mtf Length = 264 | Back alignment and structure |
| >pdb|1EVG|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli With Unmodified Catalytic Cysteine Length = 264 | Back alignment and structure |
| >pdb|1KZJ|A Chain A, Crystal Structure Of Ects W80g/dump/cb3717 Complex Length = 264 | Back alignment and structure |
| >pdb|1EV5|A Chain A, Crystal Structure Analysis Of Ala167 Mutant Of Escherichia Coli Length = 264 | Back alignment and structure |
| >pdb|1LCA|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And Cb3717 Length = 316 | Back alignment and structure |
| >pdb|1F4D|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase C146s, L143c Covalently Modified At C143 With N-[tosyl-D-Prolinyl]amino- Ethanethiol Length = 264 | Back alignment and structure |
| >pdb|1VZB|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Binary Complex With Dump Length = 316 | Back alignment and structure |
| >pdb|1TSY|A Chain A, Thymidylate Synthase R179k Mutant Length = 316 | Back alignment and structure |
| >pdb|1VZA|A Chain A, Thymidylate Synthase E60d Mutant Binary Complex With 2'- Deoxyuridine 5'-Monophosphate (Dump) Length = 316 | Back alignment and structure |
| >pdb|2G86|A Chain A, L. Casei Thymidylate Synthase Y261f In Complex With Substrate, Dump Length = 316 | Back alignment and structure |
| >pdb|1TDA|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal Deletion: Role Of The C-Terminus In Alignment Of DUMP AND CH2H4FOLATE Length = 315 | Back alignment and structure |
| >pdb|1NJC|A Chain A, Thymidylate Synthase, Mutation, N229d With 2'-Deoxycytidine 5'- Monophosphate (Dcmp) Length = 316 | Back alignment and structure |
| >pdb|2G8D|A Chain A, Lactobacillus Casei Thymidylate Synthase Y261w-dump Complex Length = 316 | Back alignment and structure |
| >pdb|1JMI|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn- 229 Mutants Of Thymidylate Synthase Length = 316 | Back alignment and structure |
| >pdb|1TSX|A Chain A, Thymidylate Synthase R179e Mutant Length = 316 | Back alignment and structure |
| >pdb|1BO7|A Chain A, Thymidylate Synthase R179t Mutant Length = 316 | Back alignment and structure |
| >pdb|1BO8|A Chain A, Thymidylate Synthase R178t Mutant Length = 316 | Back alignment and structure |
| >pdb|1JMG|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn- 229 Mutants Of Thymidylate Synthase Length = 316 | Back alignment and structure |
| >pdb|1TSV|A Chain A, Thymidylate Synthase R179a Mutant Length = 316 | Back alignment and structure |
| >pdb|1JMF|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn- 229 Mutants Of Thymidylate Synthase Length = 316 | Back alignment and structure |
| >pdb|2G8A|A Chain A, Lactobacillus Casei Y261m In Complex With Substrate, Dump Length = 316 | Back alignment and structure |
| >pdb|2G89|A Chain A, L. Casei Thymidylate Synthase Y261a In Complex With Substrate, Dump Length = 316 | Back alignment and structure |
| >pdb|1EVF|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli Length = 264 | Back alignment and structure |
| >pdb|1BP0|A Chain A, Thymidylate Synthase R23i Mutant Length = 316 | Back alignment and structure |
| >pdb|1JMH|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn- 229 Mutants Of Thymidylate Synthase Length = 316 | Back alignment and structure |
| >pdb|1NJA|A Chain A, Thymidylate Synthase, Mutation, N229c With 2'-deoxycytidine 5'- Monophosphate (dcmp) Length = 316 | Back alignment and structure |
| >pdb|1EV8|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli Length = 264 | Back alignment and structure |
| >pdb|1BPJ|A Chain A, Thymidylate Synthase R178t, R179t Double Mutant Length = 316 | Back alignment and structure |
| >pdb|1QQQ|A Chain A, Crystal Structure Analysis Of Ser254 Mutant Of Escherichia Coli Thymidylate Synthase Length = 264 | Back alignment and structure |
| >pdb|1BP6|A Chain A, Thymidylate Synthase R23i, R179t Double Mutant Length = 316 | Back alignment and structure |
| >pdb|4DQ1|A Chain A, Thymidylate Synthase From Staphylococcus Aureus. Length = 321 | Back alignment and structure |
| >pdb|3QJ7|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Thymidylate Synthase (Thya) Bound To Dump Length = 264 | Back alignment and structure |
| >pdb|1TIS|A Chain A, Crystal Structure Of Thymidylate Synthase From T4 Phage Length = 286 | Back alignment and structure |
| >pdb|4F2V|A Chain A, Crystal Structure Of De Novo Designed Serine Hydrolase, Northeast Structural Genomics Consortium (Nesg) Target Or165 Length = 272 | Back alignment and structure |
| >pdb|1B02|A Chain A, Crystal Structure Of Thymidylate Synthase A From Bacillus Subtilis Length = 279 | Back alignment and structure |
| >pdb|1BKO|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis Length = 278 | Back alignment and structure |
| >pdb|3V8H|A Chain A, Crystal Structure Of Thymidylate Synthase From Burkholderia Thailandensis Length = 327 | Back alignment and structure |
| >pdb|1CD2|A Chain A, Ligand Induced Conformational Changes In The Crystal Structures Of Pneumocystis Carinii Dihydrofolate Reductase Complexes With Folate And Nadp+ Length = 206 | Back alignment and structure |
| >pdb|1VJ3|A Chain A, Structural Studies On Bio-Active Compounds. Crystal Structure And Molecular Modeling Studies On The Pneumocystis Carinii Dihydrofolate Reductase Cofactor Complex With Tab, A Highly Selective Antifolate Length = 205 | Back alignment and structure |
| >pdb|1AI9|A Chain A, Candida Albicans Dihydrofolate Reductase Length = 192 | Back alignment and structure |
| >pdb|3RO9|A Chain A, Candida Glabrata Dihydrofolate Reductase Complexed With Nadph And 6- Ethyl-5-[(3r)-3-[3-Methoxy-5-(Pyridin-4-Yl)phenyl]but-1- Yn-1- Yl]pyrimidine-2,4-Diamine (Ucp1006) Length = 225 | Back alignment and structure |
| >pdb|3CSE|A Chain A, Candida Glabrata Dihydrofolate Reductase Complexed With Nadph And 2,4-Diamino-5-(3-(2,5-Dimethoxyphenyl)prop-1- Ynyl)-6-Ethylpyrimidine (Ucp120b) Length = 227 | Back alignment and structure |
| >pdb|2FZJ|A Chain A, New Insights Into Dhfr Interactions: Analysis Of Pneumocystis Carinii And Mouse Dhfr Complexes With Nadph And Two Highly Potent Trimethoprim Derivatives Length = 186 | Back alignment and structure |
| >pdb|3K45|A Chain A, Alternate Binding Modes Observed For The E- And Z-Isomers Of 2,4- Diaminofuro[2,3d]pyrimidines As Ternary Complexes With Nadph And Mouse Dihydrofolate Reductase Length = 186 | Back alignment and structure |
| >pdb|1DR1|A Chain A, 2.2 Angstroms Crystal Structure Of Chicken Liver Dihydrofolate Reductase Complexed With Nadp+ And Biopterin Length = 189 | Back alignment and structure |
| >pdb|3F8Y|A Chain A, Correlations Of Human Dihydrofolate Reductase With Structural Data For Human Active Site Mutant Enzyme Complexes Length = 187 | Back alignment and structure |
| >pdb|3L3R|A Chain A, Structural, Computational And Kinetic Data For Antifolate Interactions Against Pneumocystis Jirovecii, Pneumocystis Carinii And Human Dihydrofolate Reductase And Their Active Site Mutants Length = 186 | Back alignment and structure |
| >pdb|3RG9|A Chain A, Trypanosoma Brucei Dihydrofolate Reductase (Tbdhfr) In Complex With Wr99210 Length = 240 | Back alignment and structure |
| >pdb|3QFX|A Chain A, Trypanosoma Brucei Dihydrofolate Reductase Pyrimethamine Complex Length = 241 | Back alignment and structure |
| >pdb|3GHV|A Chain A, Human Dihydrofolate Reductase Q35kN64F DOUBLE MUTANT INHIBITOR Complex Length = 186 | Back alignment and structure |
| >pdb|1MVS|A Chain A, Analysis Of Two Polymorphic Forms Of A Pyrido[2,3- D]pyrimidine N9-C10 Reverse-Bridge Antifolate Binary Complex With Human Dihydrofolate Reductase Length = 187 | Back alignment and structure |
| >pdb|1DHF|A Chain A, Crystal Structures Of Recombinant Human Dihydrofolate Reductase Complexed With Folate And 5-Deazofolate Length = 186 | Back alignment and structure |
| >pdb|1U70|A Chain A, Understanding The Role Of Leu22 Variants In Methotrexate Resistance: Comparison Of Wild-Type And Leu22arg Variant Mouse And Human Dihydrofolate Reductase Length = 186 | Back alignment and structure |
| >pdb|3NXO|A Chain A, Perferential Selection Of Isomer Binding From Chiral Mixtures: Alternate Binding Modes Observed For The E- And Z-Isomers Of A Series Of 5-Substituted 2,4-Diaminofuro[2,3-D]pyrimidines As Ternary Complexes With Nadph And Human Dihydrofolate Reductase Length = 186 | Back alignment and structure |
| >pdb|3EIG|A Chain A, Crystal Structure Of A Methotrexate-Resistant Mutant Of Human Dihydrofolate Reductase Length = 186 | Back alignment and structure |
| >pdb|1HFQ|A Chain A, Comparison Of Ternary Crystal Complexes Of Human Dihydrofolate Reductase With Nadph And A Classical Antitumor Furopyrimdine Length = 186 | Back alignment and structure |
| >pdb|3F8Z|A Chain A, Human Dihydrofolate Reductase Structural Data With Active Site Mutant Enzyme Complexes Length = 187 | Back alignment and structure |
| >pdb|1DLR|A Chain A, Methotrexate-Resistant Variants Of Human Dihydrofolate Reductase With Substitution Of Leucine 22: Kinetics, Crystallography And Potential As Selectable Markers Length = 186 | Back alignment and structure |
| >pdb|3F91|A Chain A, Structural Data For Human Active Site Mutant Enzyme Complexes Length = 187 | Back alignment and structure |
| >pdb|1BOZ|A Chain A, Structure-Based Design And Synthesis Of Lipophilic 2,4- Diamino-6-Substituted Quinazolines And Their Evaluation As Inhibitors Of Dihydrofolate Reductase And Potential Antitumor Agents Length = 186 | Back alignment and structure |
| >pdb|3GHC|A Chain A, Design, Synthesis, And X-Ray Crystal Structure Of Classical And Nonclassical 2-Amino-4-Oxo-5-Substituted-6-Thieno[2,3- D]pyrimidines As Dual Thymidylate Synthase And Dihydrofolate Reductase Inhibitors And As Potential Antitumor Agenst Length = 186 | Back alignment and structure |
| >pdb|3OAF|A Chain A, Structural And Kinetic Data For Antifolate Interactions Against Pneumocystis Jirovecii, Pneumocystis Carinii And Human Dihydrofolate Reductase And Thier Active Site Mutants Length = 186 | Back alignment and structure |
| >pdb|1DLS|A Chain A, Methotrexate-Resistant Variants Of Human Dihydrofolate Reductase With Substitution Of Leucine 22: Kinetics, Crystallography And Potential As Selectable Markers Length = 186 | Back alignment and structure |
| >pdb|1U71|A Chain A, Understanding The Role Of Leu22 Variants In Methotrexate Resistance: Comparison Of Wild-type And Leu22arg Variant Mouse And Human Dihydrofolate Reductase Ternary Crystal Complexes With Methotrexate And Nadph Length = 186 | Back alignment and structure |
| >pdb|3JW3|A Chain A, Crystal Structure Of Bacillus Anthracis (F96i) Dihydrofolate Reductase Complexed With Nadph And Trimethoprim Length = 168 | Back alignment and structure |
| >pdb|3JW5|A Chain A, Crystal Structure Of Bacillus Anthracis (Y102f) Dihydrofolate Reductase Complexed With Nadph And Trimethoprim Length = 168 | Back alignment and structure |
| >pdb|3FL8|A Chain A, Crystal Structure Of B. Anthracis Dihydrofolate Reductase (Dhfr) With Rab1, A Tmp-Dihydrophthalazine Derivative Length = 166 | Back alignment and structure |
| >pdb|3E0B|A Chain A, Bacillus Anthracis Dihydrofolate Reductase Complexed With Nadph And 2,4-Diamino-5-(3-(2,5-Dimethoxyphenyl)prop-1- Ynyl)-6-Ethylpyrimidine (Ucp120b) Length = 166 | Back alignment and structure |
| >pdb|3S9U|A Chain A, Bacillus Anthracis Dihydrofolate Reductase Bound To Propargyl-Linked Tmp Analog, Ucp120j Length = 165 | Back alignment and structure |
| >pdb|2KGK|A Chain A, Solution Structure Of Bacillus Anthracis Dihydrofolate Reductase Length = 172 | Back alignment and structure |
| >pdb|3JVX|A Chain A, Crystal Structure Of Bacillus Anthracis Dihydrofolate Reductase Complexed With Nadph And 2,4-Diamino-5-(3-(3,4,5-Trimethoxyphenyl) Prop-1-Ynyl)-6-Ethylpyrimidine (Ucp120a) Length = 168 | Back alignment and structure |
| >pdb|2QK8|A Chain A, Crystal Structure Of The Anthrax Drug Target, Bacillus Anthracis Dihydrofolate Reductase Length = 162 | Back alignment and structure |
| >pdb|1DF7|A Chain A, Dihydrofolate Reductase Of Mycobacterium Tuberculosis Complexed With Nadph And Methotrexate Length = 159 | Back alignment and structure |
| >pdb|2W3V|A Chain A, Mycobacterium Avium Dihydrofolate Reductase Complexed With Nadph And Trimethoprim Length = 167 | Back alignment and structure |
| >pdb|1J3J|A Chain A, Double Mutant (C59r+s108n) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts) Complexed With Pyrimethamine, Nadph, And Dump Length = 280 | Back alignment and structure |
| >pdb|2CIG|A Chain A, Dihydrofolate Reductase From Mycobacterium Tuberculosis Inhibited By The Acyclic 4r Isomer Of Inh-Nadp A Derivative Of The Prodrug Isoniazid Length = 159 | Back alignment and structure |
| >pdb|1J3K|A Chain A, Quadruple Mutant (n51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-thymidylate Synthase (pfdhfr-ts) Complexed With Wr99210, Nadph, And Dump Length = 280 | Back alignment and structure |
| >pdb|1J3I|A Chain A, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump Length = 280 | Back alignment and structure |
| >pdb|1ZDR|A Chain A, Dhfr From Bacillus Stearothermophilus Length = 164 | Back alignment and structure |
| >pdb|1DDS|A Chain A, Molecule: Dihydrofolate Reductase (E.C.1.5.1.3) Complexed With Methotrexate Length = 159 | Back alignment and structure |
| >pdb|2INQ|B Chain B, Neutron Crystal Structure Of Escherichia Coli Dihydrofolate Reductase Bound To The Anti-Cancer Drug, Methotrexate Length = 159 | Back alignment and structure |
| >pdb|4DFR|A Chain A, Crystal Structures Of Escherichia Coli And Lactobacillus Casei Dihydrofolate Reductase Refined At 1.7 Angstroms Resolution. I. General Features And Binding Of Methotrexate Length = 159 | Back alignment and structure |
| >pdb|3DRC|A Chain A, Investigation Of The Functional Role Of Tryptophan-22 In Escherichia Coli Dihydrofolate Reductase By Site-Directed Mutagenesis Length = 159 | Back alignment and structure |
| >pdb|3IA4|A Chain A, Moritella Profunda Dihydrofolate Reductase (Dhfr) In Complex With Nadph And Methotrexate (Mtx) Length = 162 | Back alignment and structure |
| >pdb|2ZZA|A Chain A, Moritella Profunda Dihydrofolate Reductase Complex With Nadp+ And Folate Length = 162 | Back alignment and structure |
| >pdb|3Q1H|A Chain A, Crystal Structure Of Dihydrofolate Reductase From Yersinia Pestis Length = 163 | Back alignment and structure |
| >pdb|1DRA|A Chain A, Crystal Structure Of Unliganded Escherichia Coli Dihydrofolate Reductase. Ligand-Induced Conformational Changes And Cooperativity In Binding Length = 159 | Back alignment and structure |
| >pdb|2D0K|A Chain A, Methionine-Free Mutant Of Escherichia Coli Dihydrofolate Reductase Length = 159 | Back alignment and structure |
| >pdb|1DHI|A Chain A, Long-Range Structural Effects In A Second-Site Revertant Of A Mutant Dihydrofolate Reductase Length = 159 | Back alignment and structure |
| >pdb|2DRC|A Chain A, Investigation Of The Functional Role Of Tryptophan-22 In Escherichia Coli Dihydrofolate Reductase By Site-Directed Mutagenesis Length = 159 | Back alignment and structure |
| >pdb|1DRB|A Chain A, Crystal Structure Of Unliganded Escherichia Coli Dihydrofolate Reductase. Ligand-Induced Conformational Changes And Cooperativity In Binding Length = 159 | Back alignment and structure |
| >pdb|1DHJ|A Chain A, Long-Range Structural Effects In A Second-Site Revertant Of A Mutant Dihydrofolate Reductase Length = 159 | Back alignment and structure |
| >pdb|3LG4|A Chain A, Staphylococcus Aureus V31y, F92i Mutant Dihydrofolate Reductase Complexed With Nadph And 5-[(3s)-3-(5-Methoxy-2',6'-Dimethylbiphenyl- 3-Yl)but-1-Yn-1-Yl]-6-Methylpyrimidine-2,4-Diamine Length = 168 | Back alignment and structure |
| >pdb|3QL0|A Chain A, Crystal Structure Of N23ppS148A MUTANT OF E. COLI DIHYDROFOLATE Reductase Length = 160 | Back alignment and structure |
| >pdb|2W9S|A Chain A, Staphylococcus Aureus S1:dhfr In Complex With Trimethoprim Length = 161 | Back alignment and structure |
| >pdb|2BLA|A Chain A, Sp21 Double Mutant P. Vivax Dihydrofolate Reductase In Complex With Pyrimethamine Length = 238 | Back alignment and structure |
| >pdb|3TQ8|A Chain A, Structure Of The Dihydrofolate Reductase (Fola) From Coxiella Burnetii In Complex With Trimethoprim Length = 178 | Back alignment and structure |
| >pdb|2BL9|A Chain A, X-Ray Crystal Structure Of Plasmodium Vivax Dihydrofolate Reductase In Complex With Pyrimethamine And Its Derivative Length = 238 | Back alignment and structure |
| >pdb|3IX9|A Chain A, Crystal Structure Of Streptococcus Pneumoniae Dihydrofolate Reductase - Sp9 Mutant Length = 190 | Back alignment and structure |
| >pdb|2W9G|A Chain A, Wild-Type Staphylococcus Aureus Dhfr In Complex With Nadph And Trimethoprim Length = 159 | Back alignment and structure |
| >pdb|3SQY|X Chain X, S. Aureus Dihydrofolate Reductase Complexed With Novel 7-Aryl-2,4- Diaminoquinazolines Length = 167 | Back alignment and structure |
| >pdb|3SGY|A Chain A, Staphylococcus Aureus Dihydrofolate Reductase Complexed With Nadph And 6-Ethyl-5-[(3s)-3-[3-Methoxy-5-(Pyridin-4-Yl)phenyl]but- 1-Yn-1- Yl]pyrimidine-2,4-Diamine (Ucp1006) Length = 167 | Back alignment and structure |
| >pdb|3SR5|X Chain X, S. Aureus Dihydrofolate Reductase Complexed With Novel 7-Aryl-2,4- Diaminoquinazolines Length = 166 | Back alignment and structure |
| >pdb|3FYV|X Chain X, Staph. Aureus Dhfr Complexed With Nadph And Ar-102 Length = 158 | Back alignment and structure |
| >pdb|3F0B|X Chain X, Staphylococcus Aureus Dihydrofolate Reductase Complexed With Nadph And 2,4-Diamino-5-[3-(3-Methoxy-5-Phenylphenyl) But-1-Ynyl]-6-Methylpyrimidine Length = 157 | Back alignment and structure |
| >pdb|4FGG|A Chain A, S. Aureus Dihydrofolate Reductase Co-crystallized With Propyl-dap Isobutenyl-dihydrophthalazine Inhibitor Length = 163 | Back alignment and structure |
| >pdb|3M08|A Chain A, Wild Type Dihydrofolate Reductase From Staphylococcus Aureus With Inhibitor Rab1 Length = 161 | Back alignment and structure |
| >pdb|3FY8|X Chain X, Crystal Structure Of Staph. Aureus Dhfr Complexed With Nadph And Ar-101 Length = 158 | Back alignment and structure |
| >pdb|3F0U|X Chain X, Staphylococcus Aureus F98y Mutant Dihydrofolate Reductase Complexed With Nadph And 2,4-Diamino-5-[3-(3-Methoxy-5- Phenylphenyl)but-1-Ynyl]-6-Methylpyrimidine Length = 157 | Back alignment and structure |
| >pdb|3M09|A Chain A, F98y Tmp-Resistant Dihydrofolate Reductase From Staphylococcus Aureus With Inhibitor Rab1 Length = 161 | Back alignment and structure |
| >pdb|3I8A|X Chain X, Staphylococcus Aureus H30n, F98y Dihydrofolate Reductase Complexed With Nadph And 2,4-Diamino-5-(3-(2,5- Dimethoxyphenyl)prop-1-Ynyl)-6-Ethylpyrimidine (Ucp120b) Length = 157 | Back alignment and structure |
| >pdb|1LUD|A Chain A, Solution Structure Of Dihydrofolate Reductase Complexed With Trimethoprim And Nadph, 24 Structures Length = 162 | Back alignment and structure |
| >pdb|1VDR|A Chain A, Dihydrofolate Reductase Length = 162 | Back alignment and structure |
| >pdb|2JYB|A Chain A, Binary Hvdhfr1:folate Complex Length = 162 | Back alignment and structure |
| >pdb|3DFR|A Chain A, Crystal Structures Of Escherichia Coli And Lactobacillus Casei Dihydrofolate Reductase Refined At 1.7 Angstroms Resolution. I. General Features And Binding Of Methotrexate Length = 162 | Back alignment and structure |
| >pdb|1CZ3|A Chain A, Dihydrofolate Reductase From Thermotoga Maritima Length = 168 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3hj3_A Chain A, crystal structure of DHFR; TS, enzyme, crossover, non-active site, oxidoreductase; HET: UMP CB3 MTX NDP; 2.70A {Cryptosporidium hominis} PDB: 1qzf_A* 1sej_A* 3dl5_A* 3dl6_A* 2oip_A* Length = 521 | Back alignment and structure |
|---|
Score = 860 bits (2225), Expect = 0.0
Identities = 232/526 (44%), Positives = 317/526 (60%), Gaps = 26/526 (4%)
Query: 21 KRSYQVVVAAT-RDMGIGKDGKLPWKLPSDLKFFKEITQITSDAGKRNAVIMGRKTWESI 79
+++ +VVAA+ GIG +G+LPW + DLKFF +IT D+ K+NA+IMGRKTW+SI
Sbjct: 3 EKNVSIVVAASVLSSGIGINGQLPWSISEDLKFFSKITNNKCDSNKKNALIMGRKTWDSI 62
Query: 80 PLEHRPLPGRLNVVLTRSGSFDIATVENVVICGSIGSALELLAASPYCLSIEKVFVIGGG 139
RPL R+ VV++ S D A NVV+ ++ ++E L SIE +FV GG
Sbjct: 63 G--RRPLKNRIIVVISSSLPQDEAD-PNVVVFRNLEDSIENLMNDD---SIENIFVCGGE 116
Query: 140 QILSEALNAPECDAIHITEIETR-IECDTFIPSIDSSVFQPWYSSFPIVENNIRYCLSTY 198
I +AL D I++T + IE DT+ P I + F P Y S NI Y +
Sbjct: 117 SIYRDALKDNFVDRIYLTRVALEDIEFDTYFPEIPET-FLPVYMSQTFCTKNISYDFMIF 175
Query: 199 VRVRSAAVESLSQNND---------------IVLDSKTNSDKFEVKQFSFLPKMVFEK-H 242
+ +++ + N KF ++ P + F + H
Sbjct: 176 EKQEKKTLQNCDPARGQLKSIDDTVDLLGEIAGIRKMGNRHKFPKEEIYNTPSIRFGREH 235
Query: 243 EEYLYLRLVQDIISDGNLKDDRTGTGTLSKFGCQMRYNLRTTFPLLTTKKVFWRGVVEEL 302
E+ YL L+ ++ +G +++RTG T S FG MR+++R +FPLLTTKKV R + EEL
Sbjct: 236 YEFQYLDLLSRVLENGAYRENRTGISTYSIFGQMMRFDMRESFPLLTTKKVAIRSIFEEL 295
Query: 303 LWFISGSTNAKVLQEKDIHIWDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTN 362
+WFI G TN L EK ++IW GN S+EYL+ +GL REE DLGP+YGFQWRH+ Y
Sbjct: 296 IWFIKGDTNGNHLIEKKVYIWSGNGSKEYLERIGLGHREENDLGPIYGFQWRHYNGEYKT 355
Query: 363 MHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMAN-GE 421
MH DY+G G DQL +I +KNNP DRR +L+AWNPS L MALPPCH+ +Q+Y+ N
Sbjct: 356 MHDDYTGVGVDQLAKLIETLKNNPKDRRHILTAWNPSALSQMALPPCHVLSQYYVTNDNC 415
Query: 422 LSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEE 481
LSC +YQRS D+GLG PFNIASYA+LT M+A VC PG+ IGDAH+Y NH+ L+E
Sbjct: 416 LSCNLYQRSCDLGLGSPFNIASYAILTMMLAQVCGYEPGELAIFIGDAHIYENHLTQLKE 475
Query: 482 QLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 527
QL + P+PFP LK + ++I+ F ED +LIGY P+ I+M MAV
Sbjct: 476 QLSRTPRPFPQLKFKRKVENIEDFKWEDIELIGYYPYPTIKMDMAV 521
|
| >3nrr_A Dihydrofolate reductase-thymidylate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, niaid, DHFR; HET: NAP D16 UMP; 1.80A {Babesia bovis} PDB: 3kjr_A* 3i3r_A* 3k2h_A* Length = 515 | Back alignment and structure |
|---|
| >3irm_A Bifunctional dihydrofolate reductase-thymidylate; DHFR-TS antifolate complex, methyltransfe multifunctional enzyme, NADP; HET: 1CY; 2.10A {Trypanosoma cruzi} PDB: 3inv_A* 3irn_A* 3iro_A* 2h2q_A* 3cl9_A* 3clb_A* 3hbb_A* 3kjs_A* Length = 521 | Back alignment and structure |
|---|
| >3qg2_A Bifunctional dihydrofolate reductase-thymidylate; pyrimethamine, antifolate resistance, oxidoreductase, transferase; HET: CP6 NDP UMP; 2.30A {Plasmodium falciparum} PDB: 3jsu_A* 3qgt_A* Length = 608 | Back alignment and structure |
|---|
| >1j3k_C Bifunctional dihydrofolate reductase-thymidylate synthase; oxidoreductase, transferase; HET: WRA NDP UMP; 2.10A {Plasmodium falciparum} SCOP: d.117.1.1 PDB: 1j3i_C* 1j3j_C* 3dg8_C* 3dga_C* Length = 328 | Back alignment and structure |
|---|
| >1hw4_A TS, thymidylate synthase; methyltransferase, transferase; HET: CME; 2.06A {Homo sapiens} SCOP: d.117.1.1 PDB: 3n5e_A 3n5g_A* Length = 355 | Back alignment and structure |
|---|
| >3ed7_A Tsase, TS, thymidylate synthase; transferase, methyltransferase, nucleotide biosynthesis; 1.56A {Homo sapiens} PDB: 3ebu_A* 1hvy_A* 1ypv_A* 1hw3_A* 2onb_A* 3eaw_X* 3gg5_A 3gh0_A 3ef9_A 3edw_X 3ejl_A* 3gh2_X* 2rd8_A* 2rda_A 3h9k_A* 3hb8_A* 3ob7_A* 1ju6_A* 1juj_A* 3egy_X* ... Length = 295 | Back alignment and structure |
|---|
| >1f28_A Thymidylate synthase; beta-sheet, protein-inhibitor complex, transferase; HET: UMP F89; 1.90A {Pneumocystis carinii} SCOP: d.117.1.1 PDB: 1ci7_A* Length = 297 | Back alignment and structure |
|---|
| >3kgb_A Thymidylate synthase 1/2; ssgcid, NIH, niaid, SBRI, UW, decode, methyltransferase, nucleotide biosynt transferase, structural genomics; 2.20A {Encephalitozoon cuniculi} Length = 294 | Back alignment and structure |
|---|
| >3ix6_A TS, tsase, thymidylate synthase; niaid, ssgcid, seattle structural center for infectious DISE brucellosis, orchitis, epididymitis, mastitis; 2.20A {Brucella melitensis} Length = 360 | Back alignment and structure |
|---|
| >3v8h_A TS, tsase, thymidylate synthase; ssgcid, structural genomics, seattle S genomics center for infectious disease, transferase; HET: CIT; 1.65A {Burkholderia thailandensis} Length = 327 | Back alignment and structure |
|---|
| >4dq1_A TS, tsase, thymidylate synthase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: UMP; 2.71A {Staphylococcus aureus} Length = 321 | Back alignment and structure |
|---|
| >3ik0_A TS, tsase, thymidylate synthase; transferase, nucleotide synthase, methyltransferase, nucleot biosynthesis; HET: 7C1 UMP; 2.10A {Lactobacillus casei} PDB: 1lcb_A* 1lce_A* 1lca_A* 1thy_A* 1tsl_A* 1tsm_A* 2tdm_A* 3bnz_A* 3byx_A* 3bz0_A* 3c06_A* 3c0a_A* 1nje_A* 3ijz_A* 3ik1_A* 4tms_A 1tsy_A* 1tsz_A 1tdb_A* 1tda_A* ... Length = 316 | Back alignment and structure |
|---|
| >2g8o_A TS, tsase, thymidylate synthase; methyltransferase, DUMP, antifolate, high-resolution, ternar complex, beta sheet, alpha/beta protein; HET: CXM UMP CB3; 1.30A {Escherichia coli} SCOP: d.117.1.1 PDB: 1aob_A* 1f4c_A* 1f4e_A* 1f4f_A* 1jtq_A* 1jtu_A* 1jut_A* 1kce_A* 1kzi_A* 1tls_A* 1tsn_A* 1f4b_A* 2bbq_A* 2ftq_A* 2a9w_A* 2kce_A* 3b9h_A* 3bhl_A* 3bhr_A* 3tms_A ... Length = 264 | Back alignment and structure |
|---|
| >3qj7_A TS, tsase, thymidylate synthase; thymidilate synthase, structural genomics, TB structural GEN consortium, TBSGC, transferase; HET: UMP SPM; 2.50A {Mycobacterium tuberculosis} Length = 264 | Back alignment and structure |
|---|
| >1bkp_A Thymidylate synthase A; methyltransferase, DTMP synthase; 1.70A {Bacillus subtilis} SCOP: d.117.1.1 PDB: 1bko_A 1bsf_A 1bsp_A 1b02_A* Length = 278 | Back alignment and structure |
|---|
| >1tis_A Thymidylate synthase; transferase(methyltransferase); 2.70A {Enterobacteria phage T4} SCOP: d.117.1.1 Length = 286 | Back alignment and structure |
|---|
| >1b5e_A Protein (deoxycytidylate hydroxymethylase); DNTP synthesizing complex, transferase; HET: DCM; 1.60A {Enterobacteria phage T4} SCOP: d.117.1.1 PDB: 1b49_A* 1b5d_A* Length = 246 | Back alignment and structure |
|---|
| >1j3k_A Bifunctional dihydrofolate reductase-thymidylate synthase; oxidoreductase, transferase; HET: WRA NDP UMP; 2.10A {Plasmodium falciparum} SCOP: c.71.1.1 PDB: 3dg8_A* 1j3j_A* 1j3i_A* 3dga_A* Length = 280 | Back alignment and structure |
|---|
| >1kmv_A DHFR, dihydrofolate reductase; oxidoreductase, antiparasitic drugs, lipophilic antifolates; HET: LII NDP; 1.05A {Homo sapiens} SCOP: c.71.1.1 PDB: 1dhf_A* 1hfr_A* 1drf_A* 1kms_A* 1ohj_A* 1ohk_A* 1pd8_A* 1pd9_A* 1pdb_A 1s3u_A* 1s3v_A* 1s3w_A* 1u72_A* 1yho_A* 2c2s_A* 2c2t_A* 2dhf_A* 3ghw_A* 3ntz_A* 3nu0_A* ... Length = 186 | Back alignment and structure |
|---|
| >3nzb_X Dihydrofolate reductase; pneumocystius carinii DHFR inhibitor complexes, oxidoreducta oxidoreductase-oxidoreductase inhibitor complex; HET: D2N NAP; 1.45A {Pneumocystis carinii} PDB: 1daj_A* 1cd2_A* 1e26_A* 1klk_A* 1ly3_A* 1ly4_A* 1s3y_A* 2cd2_A* 2fzh_A* 1dyr_A* 3cd2_A* 3nz6_X* 3nz9_X* 3nza_X* 2fzi_A* 3nzc_X* 3td8_A* 4cd2_A* 1vj3_A* Length = 206 | Back alignment and structure |
|---|
| >3rg9_A Bifunctional dihydrofolate reductase-thymidylate; oxidoreductase, oxidoreductase-oxidoreductase inhibitor complex; HET: NDP WRA; 2.00A {Trypanosoma brucei rhodesiense} PDB: 3qfx_A* Length = 240 | Back alignment and structure |
|---|
| >3cse_A Dihydrofolate reductase; protein-ligand complex, oxidoreductase; HET: NAP N22; 1.60A {Candida glabrata} PDB: 3eej_A* 3eek_A* 3eel_A* 3eem_A* 3qlx_A* 3qly_A* 3qlz_A* Length = 227 | Back alignment and structure |
|---|
| >1aoe_A DHFR, dihydrofolate reductase; oxidoreductase, antifungal target; HET: NDP GW3; 1.60A {Candida albicans} SCOP: c.71.1.1 PDB: 1ai9_A* 1ia1_A* 1ia2_A* 1ia3_A* 1ia4_A* 1m78_A* 1m79_A* 1m7a_A* 3qlr_A* 3qls_A* 3qlw_A* Length = 192 | Back alignment and structure |
|---|
| >2bl9_A Dihydrofolate reductase-thymidylate synthase; plamodium vivax, pyrimethamine, malaria, drug resistance, oxidoreductase; HET: NDP CP6; 1.9A {Plasmodium vivax} PDB: 2blb_A* 2blc_A* 2bla_A* Length = 238 | Back alignment and structure |
|---|
| >3dfr_A Dihydrofolate reductase; oxido-reductase; HET: NDP MTX; 1.70A {Lactobacillus casei} SCOP: c.71.1.1 PDB: 1ao8_A* 1bzf_A* 1dis_A* 1diu_A* 1lud_A* 2hm9_A* 2hqp_A* 2l28_A 2lf1_A* Length = 162 | Back alignment and structure |
|---|
| >1zdr_A Dihydrofolate reductase; DHFR, NADP, oxidoreductase; 2.00A {Geobacillus stearothermophilus} Length = 164 | Back alignment and structure |
|---|
| >3ia4_A Dihydrofolate reductase; NADPH, methotrexate, oxidoreductase; HET: NDP MTX; 1.70A {Moritella profunda} PDB: 3ia5_A 2zza_A* Length = 162 | Back alignment and structure |
|---|
| >2w3w_A Dihydrofolate reductase; nonclassical antifolates, one-carbon metabolism, lipophilic antifolates, NADP, oxidoreductase; HET: VG9 NDP; 1.60A {Mycobacterium avium} PDB: 2w3v_A* Length = 167 | Back alignment and structure |
|---|
| >1df7_A DHFR, dihydrofolate reductase; structure-based inhibitor design, folateanalogs, rossmann fold; HET: NDP MTX; 1.70A {Mycobacterium tuberculosis} SCOP: c.71.1.1 PDB: 1dg5_A* 1dg7_A* 1dg8_A* 2cig_A* Length = 159 | Back alignment and structure |
|---|
| >3tq8_A Dihydrofolate reductase; oxidoreductase-oxidoreductase inhib complex; HET: NDP TOP; 1.90A {Coxiella burnetii} PDB: 3tq9_A* 3tqa_A* 3tqb_A* Length = 178 | Back alignment and structure |
|---|
| >3s9u_A Dihydrofolate reductase; oxidoreductase; HET: NAP 5DR; 1.90A {Bacillus anthracis} PDB: 3sa1_A* 3sa2_A* 3sai_A* 3e0b_A* 3jvx_A* 3jwm_A* 3jwk_A* 3jw5_A* 3jwf_A* 3jwc_A* 3jw3_A* 3dat_A* 2qk8_A* 3fl8_A* 3fl9_A* 2kgk_A* Length = 165 | Back alignment and structure |
|---|
| >3dau_A Dihydrofolate reductase; oxidoreductase, pseudo-rossmann fold, adenine nucleotide BIN domain, antibiotic resistance, methotrexate resistance; HET: MTX NAP; 1.50A {Escherichia coli} PDB: 1ddr_A* 1dds_A* 3k74_A 1ra9_A* 1dre_A* 1drh_A* 1dyi_A* 1dyh_A* 1jol_A* 1jom_A* 1ra1_A* 1dyj_A* 1ra3_A* 1ra8_A* 1ra2_A* 1rb2_A* 1rb3_A* 1rc4_A* 1rd7_A* 1re7_A* ... Length = 159 | Back alignment and structure |
|---|
| >2w9h_A DHFR, dihydrofolate reductase; oxidoreductase, one-carbon metabolism; HET: TOP; 1.48A {Staphylococcus aureus} PDB: 2w9g_A* 3sqy_X* 3srq_X* 3srr_X* 3srs_X* 3sru_X* 3srw_X* 3frd_X* 3fre_X* 3frf_X* 3fyv_X* 3fyw_X* 3sr5_X* 3frb_X* 3fra_X* 3fy8_X* 3fy9_X* 3fq0_A* 3f0b_X* 3f0s_X* ... Length = 159 | Back alignment and structure |
|---|
| >1vdr_A DHFR, dihydrofolate reductase; oxidoreductase, halophilic enzyme; 2.55A {Haloferax volcanii} SCOP: c.71.1.1 PDB: 2ith_A 2jyb_A Length = 162 | Back alignment and structure |
|---|
| >3ix9_A Dihydrofolate reductase; central beta sheet surrounded by 4 alpha helices, oxidoreductase; HET: NDP MTX; 1.95A {Streptococcus pneumoniae} Length = 190 | Back alignment and structure |
|---|
| >1juv_A DHFR, dihydrofolate reductase; complexed with NADPH, oxidoreductase; HET: NDP; 1.70A {Enterobacteria phage T4} SCOP: c.71.1.1 Length = 193 | Back alignment and structure |
|---|
| >1cz3_A Dihydrofolate reductase; dimer, hyperthermophIle, oxidoreductase; 2.10A {Thermotoga maritima} SCOP: c.71.1.1 PDB: 1d1g_A* Length = 168 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3jtw_A Dihydrofolate reductase; YP_805003.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 1.90A {Pediococcus pentosaceus atcc 25745} Length = 178 | Back alignment and structure |
|---|
| >2xw7_A Dihydrofolate reductase; oxidoreductase, NADPH; HET: PG4 NDP; 2.00A {Mycobacterium smegmatis} Length = 178 | Back alignment and structure |
|---|
| >3ky8_A Putative riboflavin biosynthesis protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE UNL; 2.12A {Shewanella loihica} Length = 197 | Back alignment and structure |
|---|
| >2gd9_A Hypothetical protein YYAP; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, oxidoreductase; 2.30A {Bacillus subtilis} Length = 189 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 527 | |||
| 3nrr_A | 515 | Dihydrofolate reductase-thymidylate synthase; stru | 100.0 | |
| 3hj3_A | 521 | Chain A, crystal structure of DHFR; TS, enzyme, cr | 100.0 | |
| 3irm_A | 521 | Bifunctional dihydrofolate reductase-thymidylate; | 100.0 | |
| 3qg2_A | 608 | Bifunctional dihydrofolate reductase-thymidylate; | 100.0 | |
| 3ed7_A | 295 | Tsase, TS, thymidylate synthase; transferase, meth | 100.0 | |
| 1j3k_C | 328 | Bifunctional dihydrofolate reductase-thymidylate s | 100.0 | |
| 3kgb_A | 294 | Thymidylate synthase 1/2; ssgcid, NIH, niaid, SBRI | 100.0 | |
| 1f28_A | 297 | Thymidylate synthase; beta-sheet, protein-inhibito | 100.0 | |
| 2aaz_A | 317 | TS, tsase, thymidylate synthase; methyl transferas | 100.0 | |
| 1hw4_A | 355 | TS, thymidylate synthase; methyltransferase, trans | 100.0 | |
| 4dq1_A | 321 | TS, tsase, thymidylate synthase; structural genomi | 100.0 | |
| 3v8h_A | 327 | TS, tsase, thymidylate synthase; ssgcid, structura | 100.0 | |
| 3uwl_A | 315 | TS, tsase, thymidylate synthase; methyltransferase | 100.0 | |
| 3qj7_A | 264 | TS, tsase, thymidylate synthase; thymidilate synth | 100.0 | |
| 2g8o_A | 264 | TS, tsase, thymidylate synthase; methyltransferase | 100.0 | |
| 1tis_A | 286 | Thymidylate synthase; transferase(methyltransferas | 100.0 | |
| 3ix6_A | 360 | TS, tsase, thymidylate synthase; niaid, ssgcid, se | 100.0 | |
| 1bkp_A | 278 | Thymidylate synthase A; methyltransferase, DTMP sy | 100.0 | |
| 1b5e_A | 246 | Protein (deoxycytidylate hydroxymethylase); DNTP s | 100.0 | |
| 3rg9_A | 240 | Bifunctional dihydrofolate reductase-thymidylate; | 100.0 | |
| 3nzb_X | 206 | Dihydrofolate reductase; pneumocystius carinii DHF | 100.0 | |
| 3s9u_A | 165 | Dihydrofolate reductase; oxidoreductase; HET: NAP | 100.0 | |
| 3tq8_A | 178 | Dihydrofolate reductase; oxidoreductase-oxidoreduc | 100.0 | |
| 3ia4_A | 162 | Dihydrofolate reductase; NADPH, methotrexate, oxid | 100.0 | |
| 3dau_A | 159 | Dihydrofolate reductase; oxidoreductase, pseudo-ro | 100.0 | |
| 3ix9_A | 190 | Dihydrofolate reductase; central beta sheet surrou | 100.0 | |
| 1kmv_A | 186 | DHFR, dihydrofolate reductase; oxidoreductase, ant | 100.0 | |
| 3dfr_A | 162 | Dihydrofolate reductase; oxido-reductase; HET: NDP | 100.0 | |
| 2bl9_A | 238 | Dihydrofolate reductase-thymidylate synthase; plam | 100.0 | |
| 2w3w_A | 167 | Dihydrofolate reductase; nonclassical antifolates, | 100.0 | |
| 1zdr_A | 164 | Dihydrofolate reductase; DHFR, NADP, oxidoreductas | 100.0 | |
| 1j3k_A | 280 | Bifunctional dihydrofolate reductase-thymidylate s | 100.0 | |
| 2w9h_A | 159 | DHFR, dihydrofolate reductase; oxidoreductase, one | 100.0 | |
| 1vdr_A | 162 | DHFR, dihydrofolate reductase; oxidoreductase, hal | 100.0 | |
| 1df7_A | 159 | DHFR, dihydrofolate reductase; structure-based inh | 100.0 | |
| 3cse_A | 227 | Dihydrofolate reductase; protein-ligand complex, o | 100.0 | |
| 1aoe_A | 192 | DHFR, dihydrofolate reductase; oxidoreductase, ant | 100.0 | |
| 1juv_A | 193 | DHFR, dihydrofolate reductase; complexed with NADP | 99.97 | |
| 1cz3_A | 168 | Dihydrofolate reductase; dimer, hyperthermophIle, | 99.96 | |
| 3jtw_A | 178 | Dihydrofolate reductase; YP_805003.1, structural G | 99.96 | |
| 3ky8_A | 197 | Putative riboflavin biosynthesis protein; structur | 99.94 | |
| 2xw7_A | 178 | Dihydrofolate reductase; oxidoreductase, NADPH; HE | 99.93 | |
| 2gd9_A | 189 | Hypothetical protein YYAP; structural genomics, jo | 99.91 | |
| 3kgy_A | 231 | Bifunctional deaminase-reductase domain protein; p | 99.88 | |
| 2b3z_A | 373 | Riboflavin biosynthesis protein RIBD; alpha/beta/a | 99.68 | |
| 2azn_A | 219 | HTP reductase, putative 5-amino-6-(5-phosphoribosy | 99.64 | |
| 2g6v_A | 402 | Riboflavin biosynthesis protein RIBD; RIBD APO str | 99.45 | |
| 2hxv_A | 360 | Diaminohydroxyphosphoribosylaminopyrimidine deami | 99.44 | |
| 2p4g_A | 270 | Hypothetical protein; pyrimidine reductase-like pr | 99.37 |
| >3nrr_A Dihydrofolate reductase-thymidylate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, niaid, DHFR; HET: NAP D16 UMP; 1.80A {Babesia bovis} PDB: 3kjr_A* 3i3r_A* 3k2h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-147 Score=1183.45 Aligned_cols=502 Identities=42% Similarity=0.772 Sum_probs=468.3
Q ss_pred CCCCCCceEEEEEEEeCCCeeecCCCCCCC-ChhhHHHHHHHhhc------cCCCCCCcEEEEccccccccCCCCCCCCC
Q 009747 16 TQPNPKRSYQVVVAATRDMGIGKDGKLPWK-LPSDLKFFKEITQI------TSDAGKRNAVIMGRKTWESIPLEHRPLPG 88 (527)
Q Consensus 16 ~~~~~mrki~livAvs~dG~IG~~g~lpW~-~p~D~~~F~~~T~~------~~~p~~~~~vIMGRkTyeslp~~~~pl~~ 88 (527)
...++||+|++|+|+|+||+||.+|+|||+ +|+|++||+++|++ +++|++.++||||||||||+|.+++|||+
T Consensus 7 ~~~~~MrkI~livA~SldG~IG~dg~LpW~~lp~Dlk~Fk~~T~g~p~~~~~~~~~~i~aVIMGRKTyESip~~~rPLp~ 86 (515)
T 3nrr_A 7 NSYEGCGDLTIFVAVALNKVIGHKNQIPWPHITHDFRFLRNGTTYIPPEVLSKNPDIQNVVIFGRKTYESIPKASLPLKN 86 (515)
T ss_dssp CTTTTCCCEEEEEEECTTSEEEBTTBCSSCCCHHHHHHHHHHHHCCCHHHHHHSTTCCEEEEEEHHHHHTSCGGGCSCTT
T ss_pred CCCCCCceEEEEEEECCCCcCCCCCCCCCcCCchHHHHHHHHHcCCCccccccccccCCEEEEcchHHHhhhhccCCCCC
Confidence 345679999999999999999999999999 99999999999986 34677789999999999999865689999
Q ss_pred CcEEEEcCCCCCCCCCCCCEEEECCHHHHHHHHhcCCCCCCCCcEEEEeCHHHHHHHhcCCCcCEEEEEEECcccccCcc
Q 009747 89 RLNVVLTRSGSFDIATVENVVICGSIGSALELLAASPYCLSIEKVFVIGGGQILSEALNAPECDAIHITEIETRIECDTF 168 (527)
Q Consensus 89 R~niVlSrt~~~~~~~~~~~~v~~sl~eai~~l~~~~~~~~~~~I~ViGGa~Iy~~~L~~~lvDel~lT~I~~~~~gd~f 168 (527)
|+||||||+... .+++.+++|+++|++.|+++. ++++||||||++||++||++++||+++||+||..++||+|
T Consensus 87 R~nIVlSrt~~~----~~~v~V~~sl~eal~~Lk~~~---~~~~I~VIGGg~Iy~~~L~~~liDel~LT~I~~~~~GDtf 159 (515)
T 3nrr_A 87 RINVILSRTVKE----VPGCLVYEDLSTAIRDLRANV---PHNKIFILGGSFLYKEVLDNGLCDKIYLTRLNKEYPGDTY 159 (515)
T ss_dssp EEEEEECSSCCC----CTTEEEESSHHHHHHHHHHHS---CCSCEEECCCHHHHHHHHHTTCEEEEEEEEESSCCCCSEE
T ss_pred CeEEEECCCCCC----CCCEEEECCHHHHHHHHhhcc---CCCCEEEECCHHHHHHHhhCCCCCEEEEEEecCccCCCcc
Confidence 999999999742 357899999999999998641 3689999999999999999999999999999999999999
Q ss_pred CCCCCCCCceEeeeecCcccCCccEEEEEEEEcccchhhccccCCccccccCCCCCcccccccccCCcccccChhHHHHH
Q 009747 169 IPSIDSSVFQPWYSSFPIVENNIRYCLSTYVRVRSAAVESLSQNNDIVLDSKTNSDKFEVKQFSFLPKMVFEKHEEYLYL 248 (527)
Q Consensus 169 FP~~~~~~f~l~~~~~~~~e~~~~~~f~~Y~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Yl 248 (527)
||++ ...|++++.+...+++++.|+|++|+|+++.+.+..+.. ......+++++|+...+++||++.+++|.|+||+
T Consensus 160 FP~~-~~~w~~v~~~~~~~~~~~~y~F~~y~R~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Yl 236 (515)
T 3nrr_A 160 FPDI-PDTFEITAISPTFSTDFVSYDFVIYERKDCKTVFPDPPF--DQLLMTGTDISVPKPKYVACPGVRIRNHEEFQYL 236 (515)
T ss_dssp CCCC-CTTEEEEEECCCEECSSCEEEEEEEEECC------CCCH--HHHHTTCSCSSCCCCSCCSSTTCCEECSTHHHHH
T ss_pred CCCc-hhhCEEEEEecccccCCCceEEEEEEEcccccccccccc--cccccccccccccccccccccccccCCchHHHHH
Confidence 9999 788999987666678999999999999977764432211 1124568888888889999999999999999999
Q ss_pred HHHHHHHHcCccccCCCCceeeeeccceeEEeCCCCCcccccccccccchHhHHHHHHhCCCChhHhhhcCcccccCccc
Q 009747 249 RLVQDIISDGNLKDDRTGTGTLSKFGCQMRYNLRTTFPLLTTKKVFWRGVVEELLWFISGSTNAKVLQEKDIHIWDGNAS 328 (527)
Q Consensus 249 ~l~~~Il~~G~~~~dRtg~~t~~i~g~~~~~dl~~~fP~lT~kk~~~k~~~~EllW~l~G~~~~~~l~~~~~~iWd~~~~ 328 (527)
+||++||++|+.+.||||+||+|+||+||||||+++||+|||||++||++++|||||++|+||+++|+++||+|||+|++
T Consensus 237 ~l~~~il~~G~~~~dRtg~~t~s~fg~~~r~dl~~~fPllTtkk~~~k~~i~EllWfl~g~tn~~~l~~~g~~iWd~n~~ 316 (515)
T 3nrr_A 237 DILADVLSHGVLKPNRTGTDAYSKFGYQMRFDLSRSFPLLTTKKVALRSIIEELLWFIKGSTNGNDLLAKNVRIWELNGR 316 (515)
T ss_dssp HHHHHHHHHCEEECCTTSSCEEEEEEEEEEEETTTCCCCCSSSCCCHHHHHHHHHHHHTTCCBTHHHHTTTCCTTHHHHS
T ss_pred HHHHHHHHhCcCCCCCCCCCeEEeccceEEEecccCCcceeecccchhhhHHHHHHHHhCCccHHHHHHcCCeecCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCCCCCcccccccccccccccccCCCCCCCchHHHHHHHHHhcCCCCcceEEEeeCccccccCCCCC
Q 009747 329 REYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPSDLKLMALPP 408 (527)
Q Consensus 329 ~~~~~~~~~~~~~~g~lG~~YG~~wR~~~~~~~~~~~~~~~~~~dQl~~vi~~Lk~~p~sRR~i~~~w~p~~~~~~~l~P 408 (527)
++||++.|+.++++||||++||+|||+|++.|.+|+++|+|+++|||++||++||+||+|||+|+++|||.++++|+|||
T Consensus 317 ~~wl~~~~~~~~~~gdlG~vYG~qwr~~~~~~~~~~~~~~g~~~DQi~~vi~~lk~nP~sRR~i~s~wnp~~~~~malpP 396 (515)
T 3nrr_A 317 RDFLDKNGFTDREEHDLGPIYGFQWRHFGAEYLDMHADYTGKGIDQLAEIINRIKTNPNDRRLIVCSWNVSDLKKMALPP 396 (515)
T ss_dssp HHHHHHTTCTTSCTTBCCSCHHHHHHHBTCCCCCTTSCCTTCSBCHHHHHHHHHHHCTTCSCCEEECCCGGGGGGSSSCC
T ss_pred hhhhhhcCCccccCCcCcchhhhheeeCCCccccccccCCccchhHHHHHHHHHhcCCCCceeEEEecChhhhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEeCCeEEEEEEeecccccccccccHHHHHHHHHHHHHhcCCcceeEEEEECcccccccchhhHHHHhhcCCC
Q 009747 409 CHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPK 488 (527)
Q Consensus 409 C~~~~qf~vr~g~L~~~~~~RS~D~~~g~p~Ni~~~~~L~~~iA~~~g~~~G~~~~~~~~~HIY~~h~~~~~~~l~r~p~ 488 (527)
||.++||+|++|+|+|++||||||+++|+||||++|++|++|||++||+++|+|+|+++|+|||+||+|++++||+|+|+
T Consensus 397 Ch~~~qf~V~~g~L~~~lyqRS~D~~lG~pfNiasyalL~~miA~~~gl~~G~~~h~~gdaHIY~nh~~~~~~ql~R~p~ 476 (515)
T 3nrr_A 397 CHCFFQFYVSDNKLSCMMHQRSCDLGLGVPFNIASYSILTAMVAQVCGLGLGEFVHNLADAHIYVDHVDAVTTQIARIPH 476 (515)
T ss_dssp SEEEEEEEEETTEEEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEEEEGGGHHHHHHHHTSCCC
T ss_pred CceEEEEEEeCCEEEEEEEchhhhHHHhhhccHHHHHHHHHHHHHHhCCeeeEEEEEEEeEEEcHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeCCCCCCCCCcccCCeEEeCCCCCCCCCccccC
Q 009747 489 PFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 527 (527)
Q Consensus 489 ~~p~l~~~~~~~~~~d~~~~df~l~~Y~~~~~i~~~~av 527 (527)
++|+|+||+++++|+||++|||+|+||+|||+|||||||
T Consensus 477 ~~P~l~i~~~~~~~~~~~~~df~l~~Y~~~p~ik~~~av 515 (515)
T 3nrr_A 477 PFPRLRLNPDIRNIEDFTIDDIVVEDYVSHPPIPMAMSA 515 (515)
T ss_dssp CCCEEEECTTCCSGGGCCGGGEEEESCCCCCCCCCCCCC
T ss_pred CCCEEEECCCCCChhcCCHhHEEEECCcCCCccCCCccC
Confidence 999999999999999999999999999999999999998
|
| >3hj3_A Chain A, crystal structure of DHFR; TS, enzyme, crossover, non-active site, oxidoreductase; HET: UMP CB3 MTX NDP; 2.70A {Cryptosporidium hominis} PDB: 1qzf_A* 1sej_A* 3dl5_A* 3dl6_A* 2oip_A* | Back alignment and structure |
|---|
| >3irm_A Bifunctional dihydrofolate reductase-thymidylate; DHFR-TS antifolate complex, methyltransfe multifunctional enzyme, NADP; HET: 1CY; 2.10A {Trypanosoma cruzi} PDB: 3inv_A* 3irn_A* 3iro_A* 2h2q_A* 3cl9_A* 3clb_A* 3hbb_A* 3kjs_A* | Back alignment and structure |
|---|
| >3qg2_A Bifunctional dihydrofolate reductase-thymidylate; pyrimethamine, antifolate resistance, oxidoreductase, transferase; HET: CP6 NDP UMP; 2.30A {Plasmodium falciparum} PDB: 3jsu_A* 4dp3_A* 4dph_A* 3qgt_A* 3um8_A* 4dpd_A* 3um5_A* 3um6_A* | Back alignment and structure |
|---|
| >3ed7_A Tsase, TS, thymidylate synthase; transferase, methyltransferase, nucleotide biosynthesis; 1.56A {Homo sapiens} SCOP: d.117.1.1 PDB: 3ebu_A* 1hvy_A* 1ypv_A* 1hw3_A* 2onb_A* 3eaw_X* 3gg5_A 3gh0_A 3ef9_A 3edw_X 3ejl_A* 3gh2_X* 4gyh_A 4h1i_A 2rd8_A* 2rda_A 3h9k_A* 3hb8_A* 3ob7_A* 1ju6_A* ... | Back alignment and structure |
|---|
| >1j3k_C Bifunctional dihydrofolate reductase-thymidylate synthase; oxidoreductase, transferase; HET: WRA NDP UMP; 2.10A {Plasmodium falciparum} SCOP: d.117.1.1 PDB: 1j3i_C* 1j3j_C* 3dg8_C* 3dga_C* | Back alignment and structure |
|---|
| >3kgb_A Thymidylate synthase 1/2; ssgcid, NIH, niaid, SBRI, UW, decode, methyltransferase, nucleotide biosynt transferase, structural genomics; 2.20A {Encephalitozoon cuniculi} SCOP: d.117.1.1 | Back alignment and structure |
|---|
| >1f28_A Thymidylate synthase; beta-sheet, protein-inhibitor complex, transferase; HET: UMP F89; 1.90A {Pneumocystis carinii} SCOP: d.117.1.1 PDB: 1ci7_A* | Back alignment and structure |
|---|
| >1hw4_A TS, thymidylate synthase; methyltransferase, transferase; HET: CME; 2.06A {Homo sapiens} SCOP: d.117.1.1 PDB: 3n5e_A 3n5g_A* | Back alignment and structure |
|---|
| >4dq1_A TS, tsase, thymidylate synthase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: UMP; 2.71A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >3v8h_A TS, tsase, thymidylate synthase; ssgcid, structural genomics, seattle S genomics center for infectious disease, transferase; HET: CIT; 1.65A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >3uwl_A TS, tsase, thymidylate synthase; methyltransferase, transferase; HET: CME FOZ; 2.07A {Enterococcus faecalis} PDB: 3ik0_A* 1lcb_A* 1lce_A* 1lca_A* 1thy_A* 1tsl_A* 1tsm_A* 2tdm_A* 3bnz_A* 3byx_A* 3bz0_A* 3c06_A* 3c0a_A* 1nje_A* 3ijz_A* 3ik1_A* 4tms_A 1tsy_A* 1tsz_A 2g86_A* ... | Back alignment and structure |
|---|
| >3qj7_A TS, tsase, thymidylate synthase; thymidilate synthase, structural genomics, TB structural GEN consortium, TBSGC, transferase; HET: UMP SPM; 2.50A {Mycobacterium tuberculosis} SCOP: d.117.1.1 | Back alignment and structure |
|---|
| >2g8o_A TS, tsase, thymidylate synthase; methyltransferase, DUMP, antifolate, high-resolution, ternar complex, beta sheet, alpha/beta protein; HET: CXM UMP CB3; 1.30A {Escherichia coli} SCOP: d.117.1.1 PDB: 1aob_A* 1f4c_A* 1f4e_A* 1f4f_A* 1jtq_A* 1jtu_A* 1jut_A* 1kce_A* 1kzi_A* 1tls_A* 1tsn_A* 1f4b_A* 2bbq_A* 2ftq_A* 2a9w_A* 2kce_A* 3b9h_A* 3bhl_A* 3bhr_A* 3tms_A ... | Back alignment and structure |
|---|
| >1tis_A Thymidylate synthase; transferase(methyltransferase); 2.70A {Enterobacteria phage T4} SCOP: d.117.1.1 | Back alignment and structure |
|---|
| >3ix6_A TS, tsase, thymidylate synthase; niaid, ssgcid, seattle structural center for infectious DISE brucellosis, orchitis, epididymitis, mastitis; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
| >1bkp_A Thymidylate synthase A; methyltransferase, DTMP synthase; 1.70A {Bacillus subtilis} SCOP: d.117.1.1 PDB: 1bko_A 1bsf_A 1bsp_A 1b02_A* | Back alignment and structure |
|---|
| >1b5e_A Protein (deoxycytidylate hydroxymethylase); DNTP synthesizing complex, transferase; HET: DCM; 1.60A {Enterobacteria phage T4} SCOP: d.117.1.1 PDB: 1b49_A* 1b5d_A* | Back alignment and structure |
|---|
| >3rg9_A Bifunctional dihydrofolate reductase-thymidylate; oxidoreductase, oxidoreductase-oxidoreductase inhibitor complex; HET: NDP WRA; 2.00A {Trypanosoma brucei rhodesiense} PDB: 3qfx_A* | Back alignment and structure |
|---|
| >3nzb_X Dihydrofolate reductase; pneumocystius carinii DHFR inhibitor complexes, oxidoreducta oxidoreductase-oxidoreductase inhibitor complex; HET: D2N NAP; 1.45A {Pneumocystis carinii} SCOP: c.71.1.1 PDB: 1daj_A* 1cd2_A* 1e26_A* 1klk_A* 1ly3_A* 1ly4_A* 1s3y_A* 2cd2_A* 2fzh_A* 1dyr_A* 3cd2_A* 3nz6_X* 3nz9_X* 3nza_X* 2fzi_A* 3nzc_X* 3td8_A* 4cd2_A* 1vj3_A* | Back alignment and structure |
|---|
| >3s9u_A Dihydrofolate reductase; oxidoreductase; HET: NAP 5DR; 1.90A {Bacillus anthracis} PDB: 3sa1_A* 3sa2_A* 3sai_A* 3e0b_A* 3jvx_A* 3jwm_A* 3jwk_A* 3jw5_A* 3jwf_A* 3jwc_A* 3jw3_A* 3dat_A* 2qk8_A* 3fl8_A* 3fl9_A* 2kgk_A* | Back alignment and structure |
|---|
| >3tq8_A Dihydrofolate reductase; oxidoreductase-oxidoreductase inhib complex; HET: NDP TOP; 1.90A {Coxiella burnetii} SCOP: c.71.1.0 PDB: 3tq9_A* 3tqa_A* 3tqb_A* | Back alignment and structure |
|---|
| >3ia4_A Dihydrofolate reductase; NADPH, methotrexate, oxidoreductase; HET: NDP MTX; 1.70A {Moritella profunda} SCOP: c.71.1.0 PDB: 3ia5_A 2zza_A* | Back alignment and structure |
|---|
| >3dau_A Dihydrofolate reductase; oxidoreductase, pseudo-rossmann fold, adenine nucleotide BIN domain, antibiotic resistance, methotrexate resistance; HET: MTX NAP; 1.50A {Escherichia coli} SCOP: c.71.1.1 PDB: 1ddr_A* 1dds_A* 3k74_A 1ra9_A* 1dre_A* 1drh_A* 1dyi_A* 1dyh_A* 1jol_A* 1jom_A* 1ra1_A* 1dyj_A* 1ra3_A* 1ra8_A* 1ra2_A* 1rb2_A* 1rb3_A* 1rc4_A* 1rd7_A* 1re7_A* ... | Back alignment and structure |
|---|
| >3ix9_A Dihydrofolate reductase; central beta sheet surrounded by 4 alpha helices, oxidoreductase; HET: NDP MTX; 1.95A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >1kmv_A DHFR, dihydrofolate reductase; oxidoreductase, antiparasitic drugs, lipophilic antifolates; HET: LII NDP; 1.05A {Homo sapiens} SCOP: c.71.1.1 PDB: 1dhf_A* 1hfr_A* 1drf_A* 1kms_A* 1ohj_A* 1ohk_A* 1pd8_A* 1pd9_A* 1pdb_A 1s3u_A* 1s3v_A* 1s3w_A* 1u72_A* 1yho_A* 2c2s_A* 2c2t_A* 2dhf_A* 3ghw_A* 3ntz_A* 3nu0_A* ... | Back alignment and structure |
|---|
| >3dfr_A Dihydrofolate reductase; oxido-reductase; HET: NDP MTX; 1.70A {Lactobacillus casei} SCOP: c.71.1.1 PDB: 1ao8_A* 1bzf_A* 1dis_A* 1diu_A* 1lud_A* 2hm9_A* 2hqp_A* 2l28_A 2lf1_A* | Back alignment and structure |
|---|
| >2bl9_A Dihydrofolate reductase-thymidylate synthase; plamodium vivax, pyrimethamine, malaria, drug resistance, oxidoreductase; HET: NDP CP6; 1.9A {Plasmodium vivax} PDB: 2blb_A* 2blc_A* 2bla_A* | Back alignment and structure |
|---|
| >2w3w_A Dihydrofolate reductase; nonclassical antifolates, one-carbon metabolism, lipophilic antifolates, NADP, oxidoreductase; HET: VG9 NDP; 1.60A {Mycobacterium avium} PDB: 2w3v_A* | Back alignment and structure |
|---|
| >1zdr_A Dihydrofolate reductase; DHFR, NADP, oxidoreductase; 2.00A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
| >1j3k_A Bifunctional dihydrofolate reductase-thymidylate synthase; oxidoreductase, transferase; HET: WRA NDP UMP; 2.10A {Plasmodium falciparum} SCOP: c.71.1.1 PDB: 3dg8_A* 1j3j_A* 1j3i_A* 3dga_A* | Back alignment and structure |
|---|
| >2w9h_A DHFR, dihydrofolate reductase; oxidoreductase, one-carbon metabolism; HET: TOP; 1.48A {Staphylococcus aureus} PDB: 2w9g_A* 3sqy_X* 3srq_X* 3srr_X* 3srs_X* 3sru_X* 3srw_X* 3frd_X* 3fre_X* 3frf_X* 3fyv_X* 3fyw_X* 3sr5_X* 3frb_X* 3fra_X* 3fy8_X* 3fy9_X* 3fq0_A* 3f0b_X* 3f0s_X* ... | Back alignment and structure |
|---|
| >1vdr_A DHFR, dihydrofolate reductase; oxidoreductase, halophilic enzyme; 2.55A {Haloferax volcanii} SCOP: c.71.1.1 PDB: 2ith_A 2jyb_A | Back alignment and structure |
|---|
| >1df7_A DHFR, dihydrofolate reductase; structure-based inhibitor design, folateanalogs, rossmann fold; HET: NDP MTX; 1.70A {Mycobacterium tuberculosis} SCOP: c.71.1.1 PDB: 1dg5_A* 1dg7_A* 1dg8_A* 2cig_A* | Back alignment and structure |
|---|
| >3cse_A Dihydrofolate reductase; protein-ligand complex, oxidoreductase; HET: NAP N22; 1.60A {Candida glabrata} PDB: 3eej_A* 3eek_A* 3eel_A* 3eem_A* 3qlx_A* 3qly_A* 3qlz_A* | Back alignment and structure |
|---|
| >1aoe_A DHFR, dihydrofolate reductase; oxidoreductase, antifungal target; HET: NDP GW3; 1.60A {Candida albicans} SCOP: c.71.1.1 PDB: 1ai9_A* 1ia1_A* 1ia2_A* 1ia3_A* 1ia4_A* 1m78_A* 1m79_A* 1m7a_A* 3qlr_A* 3qls_A* 3qlw_A* | Back alignment and structure |
|---|
| >1juv_A DHFR, dihydrofolate reductase; complexed with NADPH, oxidoreductase; HET: NDP; 1.70A {Enterobacteria phage T4} SCOP: c.71.1.1 | Back alignment and structure |
|---|
| >1cz3_A Dihydrofolate reductase; dimer, hyperthermophIle, oxidoreductase; 2.10A {Thermotoga maritima} SCOP: c.71.1.1 PDB: 1d1g_A* | Back alignment and structure |
|---|
| >3jtw_A Dihydrofolate reductase; YP_805003.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 1.90A {Pediococcus pentosaceus atcc 25745} | Back alignment and structure |
|---|
| >3ky8_A Putative riboflavin biosynthesis protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE UNL; 2.12A {Shewanella loihica} | Back alignment and structure |
|---|
| >2xw7_A Dihydrofolate reductase; oxidoreductase, NADPH; HET: PG4 NDP; 2.00A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
| >2gd9_A Hypothetical protein YYAP; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, oxidoreductase; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3kgy_A Bifunctional deaminase-reductase domain protein; putative dihydrofolate reductase, structural genomics; HET: MSE NDP; 1.50A {Chloroflexus aurantiacus j-10-fl} | Back alignment and structure |
|---|
| >2b3z_A Riboflavin biosynthesis protein RIBD; alpha/beta/alpha, deaminase domain and reductase domain, hydrolase, oxidoreductase; 2.41A {Bacillus subtilis} SCOP: c.71.1.2 c.97.1.2 PDB: 2d5n_A* 3ex8_A* | Back alignment and structure |
|---|
| >2azn_A HTP reductase, putative 5-amino-6-(5-phosphoribosylamino)uracil; oxidoreductase; HET: MA5 NAP EPE; 2.70A {Methanocaldococcus jannaschii} SCOP: c.71.1.2 | Back alignment and structure |
|---|
| >2g6v_A Riboflavin biosynthesis protein RIBD; RIBD APO structure, structural genomics, structural proteomi europe, spine, hydrolase, oxidoreductase; 2.60A {Escherichia coli} PDB: 2obc_A* 2o7p_A* | Back alignment and structure |
|---|
| >2hxv_A Diaminohydroxyphosphoribosylaminopyrimidine deami amino-6-(5-phosphoribosylamino)uracil...; oxidoreductase, structural genomics; HET: NDP; 1.80A {Thermotoga maritima} SCOP: c.71.1.2 c.97.1.2 | Back alignment and structure |
|---|
| >2p4g_A Hypothetical protein; pyrimidine reductase-like protein, structural genomics, JOIN for structural genomics, JCSG; 2.30A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 527 | ||||
| d1j3kc_ | 326 | d.117.1.1 (C:) Bifunctional enzyme dihydrofolate r | 1e-116 | |
| d1seja2 | 289 | d.117.1.1 (A:233-521) Bifunctional enzyme dihydrof | 1e-116 | |
| d1f28a_ | 295 | d.117.1.1 (A:) Thymidylate synthase {Pneumocystis | 1e-113 | |
| d1hvya_ | 288 | d.117.1.1 (A:) Thymidylate synthase {Human (Homo s | 1e-113 | |
| d1tswa_ | 316 | d.117.1.1 (A:) Thymidylate synthase {Lactobacillus | 1e-110 | |
| d2g8oa1 | 264 | d.117.1.1 (A:1-264) Thymidylate synthase {Escheric | 2e-99 | |
| d1tisa_ | 286 | d.117.1.1 (A:) Thymidylate synthase {Bacteriophage | 2e-88 | |
| d1bkpa_ | 278 | d.117.1.1 (A:) Thymidylate synthase {Bacillus subt | 1e-82 | |
| d1b5ea_ | 241 | d.117.1.1 (A:) dCMP hydroxymethylase {Bacteriophag | 6e-67 | |
| d1kmva_ | 186 | c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic | 4e-45 | |
| d1seja1 | 178 | c.71.1.1 (A:3-180) Bifunctional enzyme dihydrofola | 1e-42 | |
| d2fzia1 | 206 | c.71.1.1 (A:1-206) Dihydrofolate reductases, eukar | 3e-42 | |
| d1aoea_ | 192 | c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic | 5e-40 | |
| d1j3ka_ | 231 | c.71.1.1 (A:) Bifunctional enzyme dihydrofolate re | 7e-40 | |
| d1df7a_ | 159 | c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic | 2e-37 | |
| d1juva_ | 193 | c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic | 9e-36 | |
| d1ra9a_ | 159 | c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic | 3e-34 | |
| d1vdra_ | 157 | c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic | 3e-31 | |
| d3dfra_ | 162 | c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic | 2e-30 | |
| d1d1ga_ | 164 | c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic | 1e-17 |
| >d1j3kc_ d.117.1.1 (C:) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 326 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Thymidylate synthase/dCMP hydroxymethylase superfamily: Thymidylate synthase/dCMP hydroxymethylase family: Thymidylate synthase/dCMP hydroxymethylase domain: Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 345 bits (886), Expect = e-116
Identities = 167/309 (54%), Positives = 217/309 (70%)
Query: 218 DSKTNSDKFEVKQFSFLPKMVFEKHEEYLYLRLVQDIISDGNLKDDRTGTGTLSKFGCQM 277
+ N + F + ++ H EY YL ++ DI+ +GN + DRTG G LSKFG M
Sbjct: 17 KEEKNKNSIHPNDFQIYNSLKYKYHPEYQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIM 76
Query: 278 RYNLRTTFPLLTTKKVFWRGVVEELLWFISGSTNAKVLQEKDIHIWDGNASREYLDSVGL 337
+++L FPLLTTKK+F RG++EELLWFI G TN L K++ IW+ N +RE+LD+ L
Sbjct: 77 KFDLSQYFPLLTTKKLFLRGIIEELLWFIRGETNGNTLLNKNVRIWEANGTREFLDNRKL 136
Query: 338 TDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWN 397
RE DLGP+YGFQWRHFGA YTNM+ +Y +G DQL ++IN IKN+P RRI+L AWN
Sbjct: 137 FHREVNDLGPIYGFQWRHFGAEYTNMYDNYENKGVDQLKNIINLIKNDPTSRRILLCAWN 196
Query: 398 PSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDL 457
DL MALPPCH+ QFY+ +G+LSC MYQRS D+GLGVPFNIASY++ T MIA VC+L
Sbjct: 197 VKDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNL 256
Query: 458 APGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDP 517
P FIHV+G+AHVY NH+ L+ QL ++P PFP LK+NP+ K+I+ F DF + Y
Sbjct: 257 QPAQFIHVLGNAHVYNNHIDSLKIQLNRIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVH 316
Query: 518 HQKIEMKMA 526
H+KI M MA
Sbjct: 317 HEKISMDMA 325
|
| >d1seja2 d.117.1.1 (A:233-521) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain {Cryptosporidium hominis [TaxId: 237895]} Length = 289 | Back information, alignment and structure |
|---|
| >d1f28a_ d.117.1.1 (A:) Thymidylate synthase {Pneumocystis carinii [TaxId: 4754]} Length = 295 | Back information, alignment and structure |
|---|
| >d1hvya_ d.117.1.1 (A:) Thymidylate synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
| >d1tswa_ d.117.1.1 (A:) Thymidylate synthase {Lactobacillus casei [TaxId: 1582]} Length = 316 | Back information, alignment and structure |
|---|
| >d2g8oa1 d.117.1.1 (A:1-264) Thymidylate synthase {Escherichia coli [TaxId: 562]} Length = 264 | Back information, alignment and structure |
|---|
| >d1tisa_ d.117.1.1 (A:) Thymidylate synthase {Bacteriophage T4 [TaxId: 10665]} Length = 286 | Back information, alignment and structure |
|---|
| >d1bkpa_ d.117.1.1 (A:) Thymidylate synthase {Bacillus subtilis [TaxId: 1423]} Length = 278 | Back information, alignment and structure |
|---|
| >d1b5ea_ d.117.1.1 (A:) dCMP hydroxymethylase {Bacteriophage T4 [TaxId: 10665]} Length = 241 | Back information, alignment and structure |
|---|
| >d1kmva_ c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic type {Human (Homo sapiens) [TaxId: 9606]} Length = 186 | Back information, alignment and structure |
|---|
| >d1seja1 c.71.1.1 (A:3-180) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain {Cryptosporidium hominis [TaxId: 237895]} Length = 178 | Back information, alignment and structure |
|---|
| >d2fzia1 c.71.1.1 (A:1-206) Dihydrofolate reductases, eukaryotic type {Fungus (Pneumocystis carinii) [TaxId: 4754]} Length = 206 | Back information, alignment and structure |
|---|
| >d1aoea_ c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic type {Yeast (Candida albicans) [TaxId: 5476]} Length = 192 | Back information, alignment and structure |
|---|
| >d1j3ka_ c.71.1.1 (A:) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 231 | Back information, alignment and structure |
|---|
| >d1df7a_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Mycobacterium tuberculosis [TaxId: 1773]} Length = 159 | Back information, alignment and structure |
|---|
| >d1juva_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Bacteriophage T4 [TaxId: 10665]} Length = 193 | Back information, alignment and structure |
|---|
| >d1ra9a_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Escherichia coli [TaxId: 562]} Length = 159 | Back information, alignment and structure |
|---|
| >d1vdra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Haloferax volcanii [TaxId: 2246]} Length = 157 | Back information, alignment and structure |
|---|
| >d3dfra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Lactobacillus casei [TaxId: 1582]} Length = 162 | Back information, alignment and structure |
|---|
| >d1d1ga_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Thermotoga maritima [TaxId: 2336]} Length = 164 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 527 | |||
| d1j3kc_ | 326 | Bifunctional enzyme dihydrofolate reductase-thymid | 100.0 | |
| d1f28a_ | 295 | Thymidylate synthase {Pneumocystis carinii [TaxId: | 100.0 | |
| d1seja2 | 289 | Bifunctional enzyme dihydrofolate reductase-thymid | 100.0 | |
| d1hvya_ | 288 | Thymidylate synthase {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1tswa_ | 316 | Thymidylate synthase {Lactobacillus casei [TaxId: | 100.0 | |
| d2g8oa1 | 264 | Thymidylate synthase {Escherichia coli [TaxId: 562 | 100.0 | |
| d1bkpa_ | 278 | Thymidylate synthase {Bacillus subtilis [TaxId: 14 | 100.0 | |
| d1tisa_ | 286 | Thymidylate synthase {Bacteriophage T4 [TaxId: 106 | 100.0 | |
| d1b5ea_ | 241 | dCMP hydroxymethylase {Bacteriophage T4 [TaxId: 10 | 100.0 | |
| d1kmva_ | 186 | Dihydrofolate reductases, eukaryotic type {Human ( | 100.0 | |
| d2fzia1 | 206 | Dihydrofolate reductases, eukaryotic type {Fungus | 100.0 | |
| d1seja1 | 178 | Bifunctional enzyme dihydrofolate reductase-thymid | 100.0 | |
| d3dfra_ | 162 | Dihydrofolate reductase, prokaryotic type {Lactoba | 100.0 | |
| d1df7a_ | 159 | Dihydrofolate reductase, prokaryotic type {Mycobac | 100.0 | |
| d1aoea_ | 192 | Dihydrofolate reductases, eukaryotic type {Yeast ( | 100.0 | |
| d1j3ka_ | 231 | Bifunctional enzyme dihydrofolate reductase-thymid | 100.0 | |
| d1vdra_ | 157 | Dihydrofolate reductase, prokaryotic type {Halofer | 100.0 | |
| d1ra9a_ | 159 | Dihydrofolate reductase, prokaryotic type {Escheri | 100.0 | |
| d1juva_ | 193 | Dihydrofolate reductase, prokaryotic type {Bacteri | 100.0 | |
| d1d1ga_ | 164 | Dihydrofolate reductase, prokaryotic type {Thermot | 99.97 | |
| d2azna1 | 219 | HTP reductase {Methanococcus jannaschii [TaxId: 21 | 99.26 | |
| d2hxva1 | 198 | Riboflavin biosynthesis protein RibD {Thermotoga m | 99.16 | |
| d2b3za1 | 214 | Riboflavin biosynthesis protein RibD {Bacillus sub | 98.91 |
| >d1j3kc_ d.117.1.1 (C:) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Thymidylate synthase/dCMP hydroxymethylase superfamily: Thymidylate synthase/dCMP hydroxymethylase family: Thymidylate synthase/dCMP hydroxymethylase domain: Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.2e-100 Score=779.02 Aligned_cols=302 Identities=55% Similarity=1.040 Sum_probs=296.1
Q ss_pred ccccccccCCcccccChhHHHHHHHHHHHHHcCccccCCCCceeeeeccceeEEeCCCCCcccccccccccchHhHHHHH
Q 009747 226 FEVKQFSFLPKMVFEKHEEYLYLRLVQDIISDGNLKDDRTGTGTLSKFGCQMRYNLRTTFPLLTTKKVFWRGVVEELLWF 305 (527)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~Yl~l~~~Il~~G~~~~dRtg~~t~~i~g~~~~~dl~~~fP~lT~kk~~~k~~~~EllW~ 305 (527)
+....+++++++.+++|+|+||+++|++||++|+.+.||||+||+|+||.+|||||++|||+|||||++||++++|||||
T Consensus 25 ~~~~~~~~~~~~~~~~h~E~QYl~ll~~Il~~G~~~~dRTG~gT~s~FG~~~rfdL~~gFPlLTTKKv~~K~vi~ELLWf 104 (326)
T d1j3kc_ 25 IHPNDFQIYNSLKYKYHPEYQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLWF 104 (326)
T ss_dssp CCGGGGHHHHHCSEECSTHHHHHHHHHHHHHHCEEECCTTSSCEEEEEEEEEEEETTTCCCCCSSSCCCCHHHHHHHHHH
T ss_pred ccccceEEEeccccccCcHHHHHHHHHHHHHhCCccCCCCCCceEEeecceEEEecccCCceeEeccchHHHHHHHHHHH
Confidence 44467888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCChhHhhhcCcccccCccchhhhhhcCCCCCCCCCCCCcccccccccccccccccCCCCCCCchHHHHHHHHHhcC
Q 009747 306 ISGSTNAKVLQEKDIHIWDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNN 385 (527)
Q Consensus 306 l~G~~~~~~l~~~~~~iWd~~~~~~~~~~~~~~~~~~g~lG~~YG~~wR~~~~~~~~~~~~~~~~~~dQl~~vi~~Lk~~ 385 (527)
|+|+||+++|+++||+|||+|+.++|+++.++..+++||+|++||+|||+||+.+.+|..+|+++++|||++||++||+|
T Consensus 105 L~G~tn~~~L~~~~v~IWd~~a~~e~~~~~~~~~~~~gdlGpvYG~qwR~~~~~~~~~~~~~~~~~~DQl~~vI~~Lk~n 184 (326)
T d1j3kc_ 105 IRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMYDNYENKGVDQLKNIINLIKND 184 (326)
T ss_dssp HTTCCBHHHHHTTTCCTTSGGGSHHHHHHTTCTTSCTTBCCSCHHHHHHHBTSCCCCTTSCCTTCSBCHHHHHHHHHHHC
T ss_pred HhCCcchhhHHhcCCcccccccchhhhhhhhhcccccCcccccccccccccCcccccCcCccccccchhHHHHHHHHHhC
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred CCCcceEEEeeCccccccCCCCCceeEEEEEEeCCeEEEEEEeecccccccccccHHHHHHHHHHHHHhcCCcceeEEEE
Q 009747 386 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHV 465 (527)
Q Consensus 386 p~sRR~i~~~w~p~~~~~~~l~PC~~~~qf~vr~g~L~~~~~~RS~D~~~g~p~Ni~~~~~L~~~iA~~~g~~~G~~~~~ 465 (527)
|+|||+|+++|||.++.+|+|||||.++||+|++|+|+|+++|||+|+++|+||||++|++|++|||+.||++||+|+|+
T Consensus 185 P~sRR~ii~~wnp~~l~~~~lpPCh~~~qF~v~~g~L~~~~~qRS~D~~lG~pfNi~~yalL~~~iA~~~gl~~G~~~h~ 264 (326)
T d1j3kc_ 185 PTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHV 264 (326)
T ss_dssp TTCSCCEEECCCGGGGGGSSSCCSEEEEEEEEETTEEEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCcceeEEEecCHHHcCccccceeeeEEEEeecCCeEEEEEEechhhhhhhhhhHHHHHHHHHHHHHHhhcccccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECcccccccchhhHHHHhhcCCCCCCeEEeCCCCCCCCCcccCCeEEeCCCCCCCCCccccC
Q 009747 466 IGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 527 (527)
Q Consensus 466 ~~~~HIY~~h~~~~~~~l~r~p~~~p~l~~~~~~~~~~d~~~~df~l~~Y~~~~~i~~~~av 527 (527)
++|+|||+||+++|++||+|+|+++|+|+|++++++|+||+++||+|+||+|||+||||||.
T Consensus 265 ~gd~HIY~nH~~~vkeqL~R~P~~~P~L~i~~~~~~i~d~~~~Df~L~~Y~~hp~Ik~~maa 326 (326)
T d1j3kc_ 265 LGNAHVYNNHIDSLKIQLNRIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMAA 326 (326)
T ss_dssp EEEEEEEGGGHHHHHHHTTSCCCCCCEEEECTTCCSGGGCCGGGEEEECCCCCCCCCCCSCC
T ss_pred EEEEEEcHhHHHHHHHHhcCCCCCCCEEEECCCCCchhcCCeehEEEECCCCCCCCCcCccC
Confidence 99999999999999999999999999999999999999999999999999999999999984
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| >d1f28a_ d.117.1.1 (A:) Thymidylate synthase {Pneumocystis carinii [TaxId: 4754]} | Back information, alignment and structure |
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| >d1seja2 d.117.1.1 (A:233-521) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain {Cryptosporidium hominis [TaxId: 237895]} | Back information, alignment and structure |
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| >d1hvya_ d.117.1.1 (A:) Thymidylate synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1tswa_ d.117.1.1 (A:) Thymidylate synthase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
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| >d2g8oa1 d.117.1.1 (A:1-264) Thymidylate synthase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1bkpa_ d.117.1.1 (A:) Thymidylate synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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| >d1tisa_ d.117.1.1 (A:) Thymidylate synthase {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
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| >d1b5ea_ d.117.1.1 (A:) dCMP hydroxymethylase {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
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| >d1kmva_ c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2fzia1 c.71.1.1 (A:1-206) Dihydrofolate reductases, eukaryotic type {Fungus (Pneumocystis carinii) [TaxId: 4754]} | Back information, alignment and structure |
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| >d1seja1 c.71.1.1 (A:3-180) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain {Cryptosporidium hominis [TaxId: 237895]} | Back information, alignment and structure |
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| >d3dfra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
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| >d1df7a_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1aoea_ c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic type {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
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| >d1j3ka_ c.71.1.1 (A:) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
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| >d1vdra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Haloferax volcanii [TaxId: 2246]} | Back information, alignment and structure |
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| >d1ra9a_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1juva_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
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| >d1d1ga_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d2azna1 c.71.1.2 (A:6-224) HTP reductase {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
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| >d2hxva1 c.71.1.2 (A:148-345) Riboflavin biosynthesis protein RibD {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d2b3za1 c.71.1.2 (A:146-359) Riboflavin biosynthesis protein RibD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
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