Citrus Sinensis ID: 009759

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520------
Protein Sequence
MTTPSSLPINPSLSPPSLFAPSSTTPCYSKPSSRSSSSSFSFKVSSFNSSRTKPIFLNCKKFDYLRVNSEKSRKRLEGLVVRDSDNSRQSNMTISEVREDEVEAPLLDPEINENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHcccEEEEEEccccccccccccEEEEEccccccccccccEEccccHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHccccEEEEccccHHHHHHHccccHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHcccccccEEEccccccccccccccccHHHHHHccccccccEEEEEEccccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHcccccEEEEEccccHHHHHHHHHccEEccccccccHHHHHHHHHHHcccEEEcccccccccccccccccEEEEcccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEcccccccccccccccccccccccccccccccccccEEEEEEcccccEEcccccHHHHccccccHHHHHcccccEEEEEccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHcccEEEEEEcccccccHccccEEEEEccccccccccccccccccHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHccccHHHHHHHHHHHHHHHHHcccEcccHHHHHHHHHcccccHHHEEEccccccHHHcccccccHHHHHHHccccccccEEEEEccccHHccHHHHHHHHHHccccEEEEEcccHHHHHHHHHcccccEEEEEEccHHHHHHHHHcccEEEEccccHHHHHHHHHHHHccccEEEEcccccHHccccccccccEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHHHcHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mttpsslpinpslsppslfapssttpcyskpssrsssssfsfkvssfnssrtkpiflnckkfdyLRVNSEKSRKRLEglvvrdsdnsrqsnmtisevredeveaplldpeinennsrprrialfvepspfsyvsgyKNRFQNFIKYLREMGDEVMVVTthegvpqefygakligsrsfpcpwyqkvplslalspriisevarfkpdiihasspgIMVFGALIIAKLLCVPivmsyhthvpvyiprytfswlvKPMWLVIKFLHRaadltlvpsvaIGKDLEAARVTAANKIRIwkkgvdsesfhprfrssemrwrlsngepdkplivhVGRLGVEKSLDFLKRVMDRLPEARiafigdgpyrEELEKMFTGMPAVFTGMLLGEELSQayasgdvfvmpseseTLGLVVLEAMssgipvvgvraggipdiipedqdgkigylfnpgdlddclskleplLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAkrifpsaevnys
Flexible Loop (DISEMBL)
mttpsslpinpslsppslfAPSSTTPCYSKpssrsssssfsfkvssfnssrtkpiflnckkfdylrvnseksrkrleglvvrdsdnsrqsnmtisevredeveaplldpeinennsrprrIALFVepspfsyvsgYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAankiriwkkgvdsesfhprfrssemrwrlsngepdkplivhvgrlgveKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWlakrifpsaevnys
Low Complexity Region (SEG)
MTTpsslpinpslsppslfapssttpCYskpssrsssssfsfkvssfnssRTKPIFLNCKKFDYLRVNSEKSRKRLEGLVVRDSDNSRQSNMTISEVREDEVEAPLLDPEINENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Disordered region (IsUnstruct)
*****************************************************PIFLNCKKFDYLRV*****************************************************IALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD***********************KPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRE*********MEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFP*******
Disordered Region (DISOPRED)
**********PSLSPPSLFA****************************************************************************************************IALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI****************LAK***********
Disordered Region (DISEMBL)
********INPSLSPPSL******************************SSRTKPIFLNCKKFDYLRVNSEKSRKRLEGLVVRDSDNSRQSNMTISEVREDEVEAPLLDPEINENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Disordered Region (DISPRO)
*******P*NPSLSPPSLFAPSSTTPCYSK******SSSFSFKVSSFNSSRTKPIFLNCKKFDYLRVNSEKSRKRLEGLVVRDSDNSRQSNMTISEVRE***************NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSA*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTTPSSLPINPSLSPPSLFAPSSTTPCYSKPSSRSSSSSFSFKVSSFNSSRTKPIFLNCKKFDYLRVNSEKSRKRLEGLVVRDSDNSRQSNMTISEVREDEVEAPLLDPEINENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNYS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	526	2.2.26 [Sep-21-2011]
Q8NT41	413	GDP-mannose-dependent alp	yes	no	0.667	0.849	0.319	9e-39
O06423	378	GDP-mannose-dependent alp	yes	no	0.648	0.902	0.336	4e-38
A0QRG8	375	GDP-mannose-dependent alp	yes	no	0.652	0.914	0.327	7e-33
A0R043	382	GDP-mannose-dependent alp	no	no	0.353	0.486	0.341	4e-20
P0CF99	381	GDP-mannose-dependent alp	no	no	0.306	0.422	0.358	3e-19
A5U3B9	381	GDP-mannose-dependent alp	no	no	0.306	0.422	0.358	3e-19
Q59002	390	Uncharacterized glycosylt	yes	no	0.382	0.515	0.308	1e-17
Q65CC7	386	Glycosyltransferase KanE	N/A	no	0.5	0.681	0.267	6e-15
O53522	385	GDP-mannose-dependent alp	no	no	0.340	0.464	0.313	5e-14
Q4JSW2	419	D-inositol 3-phosphate gl	no	no	0.418	0.525	0.284	6e-14

>sp|Q8NT41|MGTA_CORGL GDP-mannose-dependent alpha-mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=mgtA PE=1 SV=1

 Score =  161 bits (408), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 181/373 (48%), Gaps = 22/373 (5%)

Query: 117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVT----THEGVPQEFYGAKL 172
           RP R+A+  E S    V+G  N     +++L+  G + +V+       E     + G ++
Sbjct: 5   RPMRVAIVAE-SFLPNVNGVTNSVLRVLEHLKANGHDALVIAPGARDFEEEIGHYLGFEI 63

Query: 173 IGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV 232
           +   +   P    +P+ + L P + S +  + PDIIH +SP ++   A   A+ L +P +
Sbjct: 64  VRVPTVRVPLIDSLPIGVPL-PSVTSVLREYNPDIIHLASPFVLGGAAAFAARQLRIPAI 122

Query: 233 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 292
             Y T V  +  RY  + L    W  IK +H     TL PS      ++  R    N I 
Sbjct: 123 AIYQTDVAGFSQRYHLAPLATASWEWIKTVHNMCQRTLAPS---SMSIDELRDHGINDIF 179

Query: 293 IWKKGVDSESFHPRFRSSEMR--WRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE 350
            W +GVDS+ FHP  RS  +R  W  S     K ++  VGRL  EK ++ L  +  R  +
Sbjct: 180 HWARGVDSKRFHPGKRSVALRKSWDPSGA---KKIVGFVGRLASEKGVECLAGLSGR-SD 235

Query: 351 ARIAFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVL 409
            ++  +GDGP  + L++M   MP A+FTG L GEEL+  YAS D+FV P E ET    + 
Sbjct: 236 IQLVIVGDGPEAKYLQEM---MPDAIFTGALGGEELATTYASLDLFVHPGEFETFCQAIQ 292

Query: 410 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ 469
           EA +SG+P +G RAGG  D+I E   G  G L +  D  + L      + +      M  
Sbjct: 293 EAQASGVPTIGPRAGGPIDLINE---GVNGLLLDVVDFKETLPAAAEWILDDSRHSEMCA 349

Query: 470 AARQEMEKYDWRA 482
           AA + ++   W A
Sbjct: 350 AAWEGVKDKTWEA 362

Catalyzes the addition of a mannose residue from GDP-D-mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D-mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)-glycerol(ManGlcAGroAc2).
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) (taxid: 196627)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|O06423|MGTA_MYCTU GDP-mannose-dependent alpha-mannosyltransferase OS=Mycobacterium tuberculosis GN=mgtA PE=1 SV=1

 Score =  159 bits (403), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 184/371 (49%), Gaps = 30/371 (8%)

Query: 120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKL------- 172
           R+A+  E S    V+G  N     +++LR  G E +V+   +  P E    +L       
Sbjct: 5   RVAIVAE-SFLPQVNGVSNSVVKVLEHLRRTGHEALVIAP-DTPPGEDRAERLHDGVRVH 62

Query: 173 -IGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPI 231
            + SR FP      +PL +  + R++  +  F PD++H +SP ++ +G L  A+ L VP 
Sbjct: 63  RVPSRMFPK--VTTLPLGVP-TFRMLRALRGFDPDVVHLASPALLGYGGLHAARRLGVPT 119

Query: 232 VMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKI 291
           V  Y T VP +   Y      +  W   + LHR AD TL PS A  + L A  +    ++
Sbjct: 120 VAVYQTDVPGFASSYGIPMTARAAWAWFRHLHRLADRTLAPSTATMESLIAQGIP---RV 176

Query: 292 RIWKKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPE 350
             W +GVD + F P  R+  +R R S   PD KP++  VGRL  EK +D L  +      
Sbjct: 177 HRWARGVDVQRFAPSARNEVLRRRWS---PDGKPIVGFVGRLAPEKHVDRLTGLAAS-GA 232

Query: 351 ARIAFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVL 409
            R+  +GDG  R  L+   + MP AVFTG   G+EL++AYAS DVFV   E ET   VV 
Sbjct: 233 VRLVIVGDGIDRARLQ---SAMPTAVFTGARYGKELAEAYASMDVFVHSGEHETFCQVVQ 289

Query: 410 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ 469
           EA++SG+PV+   AGG  D+I      + G L   G+ +  L      L ++  R  +  
Sbjct: 290 EALASGLPVIAPDAGGPRDLITPH---RTGLLLPVGEFEHRLPDAVAHLVHERQRYAL-- 344

Query: 470 AARQEMEKYDW 480
           AAR+ +    W
Sbjct: 345 AARRSVLGRSW 355

Catalyzes the addition of a mannose residue from GDP-D-mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D-mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)-glycerol(ManGlcAGroAc2).

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|A0QRG8|MGTA_MYCS2 GDP-mannose-dependent alpha-mannosyltransferase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=mgtA PE=3 SV=1

 Score =  142 bits (358), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 177/369 (47%), Gaps = 26/369 (7%)

Query: 120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVT--THEGVP-----QEFYGAKL 172
           R+A+  E S    V+G  N     I +LR  G EV+V+   T  G P      +      
Sbjct: 2   RVAIVAE-SFLPNVNGVTNSVLRVIDHLRRTGHEVLVIAPDTPRGQPPADRIHDGVRVHR 60

Query: 173 IGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV 232
           + SR FP      +PL +   PR+I  +  F PD++H +SP ++ +G L  A+ L VP V
Sbjct: 61  VPSRMFP--KITSLPLGVP-RPRMIGVLRGFDPDVVHLASPALLGYGGLHAARHLGVPSV 117

Query: 233 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 292
             + T V  +   Y      +  W   + LH  AD TL PS +  ++L A R+    ++ 
Sbjct: 118 AVFQTDVAGFAESYGMGVASRAAWAWTRHLHSRADRTLAPSTSAMENLAAHRIP---RVH 174

Query: 293 IWKKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEA 351
            W +GVD   F P  R   +R   S   PD +P++  VGRL  EK ++ L  +  R  + 
Sbjct: 175 RWGRGVDITGFVPSARDEHLRRTWS---PDGRPIVGFVGRLAPEKHVERLAVLAAR-DDL 230

Query: 352 RIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA 411
           ++  +GDG  R +L+ +     AVFTG L G  L+ AYAS DVFV P E ET    V EA
Sbjct: 231 QLVIVGDGVDRVKLQTVLP--TAVFTGELRGAALAAAYASMDVFVHPGEHETFCQTVQEA 288

Query: 412 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAA 471
           M+SG+PV+   AGG  D++      + G L +    +  L      L  +  R   G AA
Sbjct: 289 MASGVPVIAPDAGGPRDLV---APCRTGLLLDVDGFECALPAAVTHLIAE--RRRYGIAA 343

Query: 472 RQEMEKYDW 480
           R+ +    W
Sbjct: 344 RRSVLARTW 352

Catalyzes the addition of a mannose residue from GDP-D-mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D-mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)-glycerol(ManGlcAGroAc2).

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|A0R043|PIMB_MYCS2 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=pimB PE=1 SV=1

 Score =  100 bits (248), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 105/208 (50%), Gaps = 22/208 (10%)

Query: 297 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM----DRLPEAR 352
           GVD++ F P    +  R R   G  D+P++V + RL   K  D L R +     R+P+  
Sbjct: 167 GVDTDRFAPD-PDARARMRERYGLGDRPVVVCLSRLVPRKGQDMLIRALPELRRRVPDTA 225

Query: 353 IAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSES------- 401
           +A +G GPY E L++M + +      VFT  +  EEL   +A  DVF MP  +       
Sbjct: 226 LAIVGGGPYLETLQRMASDLGVAEHVVFTRGIPAEELPAHHAMADVFAMPCRTRGAGLDV 285

Query: 402 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 461
           E LG+V LEA + G+PVV  R+GG P+ +    DGK G + +  D+D   + +  LL + 
Sbjct: 286 EGLGIVYLEASACGVPVVAGRSGGAPETV---LDGKTGTVVDGTDVDAITTAVGDLLADP 342

Query: 462 ELRETMGQAARQ-EMEKYDWRAATRTIR 488
                MG A R   ++ + WR  TR  R
Sbjct: 343 RRAAAMGVAGRHWALDNWQWR--TRGAR 368

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose residues (PIM2). Can also add a mannose residue to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol mannoside (PIM1) or to the position 6 of a monoacyl phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (AcPIM1) to generate a mononacyl phosphatidyl-myo-inositol dimannoside (AcPIM2).

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|P0CF99|PIMC_MYCTU GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase OS=Mycobacterium tuberculosis GN=pimC PE=1 SV=1

 Score = 97.1 bits (240), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH 328
           T+V +    ++ E  R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH
Sbjct: 149 TVVCTTGFARE-EFDRIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVH 204

Query: 329 VGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE 384
            GRL VEK    S+D L  + D   +AR+   G+GP R  LE+  TG+P  FTG +    
Sbjct: 205 CGRLSVEKHADRSIDALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRH 264

Query: 385 -LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 433
            ++   AS DV + P   ET GL  LE+++ G P V  R   + +II  D
Sbjct: 265 AVAGLLASADVALAPGPHETFGLAALESLACGTPAVVSRTSALTEIITAD 314

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of the alpha-1,6-linked mannose residue of the triacyl phosphatidylinositol dimannoside (Ac3PIM2) to generate triacyl phosphatidylinositol trimannoside (Ac3PIM3).

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|A5U3B9|PIMC_MYCTA GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pimC PE=3 SV=1

 Score = 97.1 bits (240), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH 328
           T+V +    ++ E  R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH
Sbjct: 149 TVVCTTGFARE-EFDRIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVH 204

Query: 329 VGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE 384
            GRL VEK    S+D L  + D   +AR+   G+GP R  LE+  TG+P  FTG +    
Sbjct: 205 CGRLSVEKHADRSIDALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRH 264

Query: 385 -LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 433
            ++   AS DV + P   ET GL  LE+++ G P V  R   + +II  D
Sbjct: 265 AVAGLLASADVALAPGPHETFGLAALESLACGTPAVVSRTSALTEIITAD 314

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of the alpha-1,6-linked mannose residue of the triacyl phosphatidylinositol dimannoside (Ac3PIM2) to generate triacyl phosphatidylinositol trimannoside (Ac3PIM3).

Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) (taxid: 419947)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|Q59002|Y1607_METJA Uncharacterized glycosyltransferase MJ1607 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1607 PE=3 SV=1

 Score = 91.7 bits (226), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 13/214 (6%)

Query: 286 TAANKIRIWKKGVDSESFHPRFRSSE-MRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKR 343
           T  +K+++   G++   F       E + +R S G + D+ +I+ VGRL  +K +++L R
Sbjct: 169 TPEDKVKVIYNGINPWEFDINLSWEEKINFRRSIGVQDDEKMILFVGRLTYQKGIEYLIR 228

Query: 344 VMDRLPE---ARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFV 396
            M ++ E   A++   G G  R+ LE +   +      VF G + G+ L + Y S DV V
Sbjct: 229 AMPKILERHNAKLVIAGSGDMRDYLEDLCYQLGVRHKVVFLGFVNGDTLKKLYKSADVVV 288

Query: 397 MPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEP 456
           +PS  E  G+V LEAM++G PVV    GG+ +II  + +G   Y  NP   D     ++ 
Sbjct: 289 IPSVYEPFGIVALEAMAAGTPVVVSSVGGLMEIIKHEVNGIWVYPKNP---DSIAWGVDR 345

Query: 457 LLYNQELRETMGQAARQEM-EKYDWRAATRTIRN 489
           +L +   RE +   A++++ EKY W    +   N
Sbjct: 346 VLSDWGFREYIVNNAKKDVYEKYSWDNIAKETVN 379

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q65CC7|KANE_STRKN Glycosyltransferase KanE OS=Streptomyces kanamyceticus GN=kanE PE=1 SV=1

 Score = 82.8 bits (203), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 32/295 (10%)

Query: 209 HASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI---PRYTFSWLVKPM--WLVIKFLH 263
           H    G   F   +++++L VP+V+  H+    Y+   P   F  +  P+  W     + 
Sbjct: 91  HCDGSGAAAFYPYLMSRILGVPLVVQIHS--SRYLSQHPTTLFERVTDPIAKWAERHAVR 148

Query: 264 RAADLTLVPSVAIGKDLEAARVTAANKIRIWK------KGVDSESFHPRFRSSEMRWRLS 317
           +AA + ++   A  +    A++ A    R+        K  D+E+     R +E+R R  
Sbjct: 149 KAAAVLMLTDRARDEMRRKAQLPAERVHRLAYLASDQFKDADTEA-----RRAELRERY- 202

Query: 318 NGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREELEKMFTGMP 373
            G  D+P++++VGR+  EK +++       +  R  + +    GDGP R +LEK+     
Sbjct: 203 -GLDDRPIVLYVGRIAAEKGVEYYIEAAAELTRRGRDCQFVIAGDGPARPDLEKLIGARG 261

Query: 374 ----AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDI 429
                  TG +  E +    + G++ V+PS  E LG+V+LE M+   P+V     G+  +
Sbjct: 262 LRDRVTITGFMSHEFIPSMISLGELVVLPSRYEELGIVILECMTMRRPLVAHDVNGVNKL 321

Query: 430 IPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ-AARQEMEKYDWRAA 483
           I   +DG  G +  P    +    +E LL + ELRE M + AA     KY   AA
Sbjct: 322 I---EDGTTGIVVPPFRTPEMADAVERLLDDPELRERMAENAAPLPAAKYSLSAA 373

Glycosyltransferase involved in the biosynthesis of kanamycin by mediating conversion of paromamine to 3''-deamino-3''-hydroxykanamycin C using UDP-D-3-acetylglucosamine as sugar donor. Can also use UDP-alpha-D-glucose as sugar donor but with much lower activity compared to UDP-D-3-acetylglucosamine.

Streptomyces kanamyceticus (taxid: 1967)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|O53522|PIMB_MYCTU GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase OS=Mycobacterium tuberculosis GN=pimB PE=1 SV=2

 Score = 79.7 bits (195), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 22/201 (10%)

Query: 297 GVDSESFHPR-FRSSEMRWRLSNGEPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEA 351
           GVD++ F P     +E+R R   GE  +P +V + RL    G +  +  L  +  R+  A
Sbjct: 172 GVDTDRFRPDPAARAELRKRYRLGE--RPTVVCLSRLVPRKGQDTLVTALPSIRRRVDGA 229

Query: 352 RIAFIGDGPYREELEKMF--TGMP--AVFTGMLLGEELSQAYASGDVFVMPSES------ 401
            +  +G GPY E L K+    G+     FTG +  +EL   +A  DVF MP  +      
Sbjct: 230 ALVIVGGGPYLETLRKLAHDCGVADHVTFTGGVATDELPAHHALADVFAMPCRTRGAGMD 289

Query: 402 -ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN 460
            E LG+V LEA ++G+PV+   +GG P+ +   Q  K G + +   +D     +  LL +
Sbjct: 290 VEGLGIVFLEASAAGVPVIAGNSGGAPETV---QHNKTGLVVDGRSVDRVADAVAELLID 346

Query: 461 QELRETMGQAARQEMEKYDWR 481
           ++    MG A R E     WR
Sbjct: 347 RDRAVAMGAAGR-EWVTAQWR 366

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose residues (PIM2). Can also add a mannose residue to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol mannoside (PIM1).

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

>sp|Q4JSW2|MSHA_CORJK D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium jeikeium (strain K411) GN=mshA PE=3 SV=1

 Score = 79.7 bits (195), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 19/239 (7%)

Query: 266 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPL 325
           ADL +V +    +DL          IR+   G D + F P    +  R R   G P +  
Sbjct: 165 ADLLIVNTDQEVQDLIEGYDATTCAIRVVPPGADVDRFTPGSDRATERSRRELGIPFRTK 224

Query: 326 IVH-VGRL----GVEKSLDFLKRVMDRLPEARIAFI----GDGPYREELEKMFTGMPAVF 376
           ++  VGRL    G +  L  +  ++DR P+ ++A +      G    ELE++      + 
Sbjct: 225 VIGFVGRLQRLKGPQVLLRAVAELLDRHPQQQLAVVICGGSSGAGGNELERLQLLAEELG 284

Query: 377 TGMLLG-------EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDI 429
               +        EEL   Y + D+  +PS +E+ GLV LEA + G PVV  R GG+P  
Sbjct: 285 ISRCVRFLAPRPPEELVGVYRAADIVAVPSYNESFGLVALEAQACGTPVVATRTGGLPIA 344

Query: 430 IPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR 488
           +     GK G L +  D  D    L  L+ + +LR  MG+ A     K+ W+A+   + 
Sbjct: 345 V---DGGKSGLLVDGHDPSDWADALGKLVLDDDLRIAMGEYAPSHAAKFSWQASAEALH 400

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Corynebacterium jeikeium (strain K411) (taxid: 306537)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	526
449439908	515	PREDICTED: GDP-mannose-dependent alpha-m	0.961	0.982	0.772	0.0
224090935	433	predicted protein [Populus trichocarpa]	0.819	0.995	0.889	0.0
356496170	523	PREDICTED: GDP-mannose-dependent alpha-m	0.973	0.978	0.773	0.0
356568054	515	PREDICTED: GDP-mannose-dependent alpha-m	0.965	0.986	0.784	0.0
255581077	452	glycosyltransferase, putative [Ricinus c	0.806	0.938	0.896	0.0
359481678	519	PREDICTED: GDP-mannose-dependent alpha-m	0.903	0.915	0.791	0.0
356504282	517	PREDICTED: GDP-mannose-dependent alpha-m	0.958	0.974	0.770	0.0
224140379	429	predicted protein [Populus trichocarpa]	0.815	1.0	0.879	0.0
297740238	436	unnamed protein product [Vitis vinifera]	0.781	0.942	0.883	0.0
357468691	510	Glycogen synthase [Medicago truncatula]	0.933	0.962	0.767	0.0

>gi|449439908|ref|XP_004137727.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Cucumis sativus] gi|449483456|ref|XP_004156597.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Cucumis sativus]

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/533 (77%), Positives = 452/533 (84%), Gaps = 27/533 (5%)

Query: 1   MTTPSSLPINPSLSPPSL---FAPSSTTPCYSKPSSRSSSSSFSFKVSSFNSSRTKPI-- 55
           M T +SL IN SLSPP      A ++T   Y  PSS         +   F S  + P   
Sbjct: 1   MMTSTSLSINLSLSPPPFSTSAAVATTISFYEAPSS--------LRFPHFRSLTSNPTSS 52

Query: 56  FLNCKKFDYLRVNSEKSRKRLEGLVVRDSDNSRQSNMTISEVREDEVEA---PLLDPEIN 112
           F +  +F  L+ +S +SR R  G++     + + + MTI+EVR ++ E    PLLDPE  
Sbjct: 53  FCDISRFTCLK-SSFRSRGR--GIL-----SVKANKMTIAEVRPEDGEEDSPPLLDPE-- 102

Query: 113 ENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKL 172
             NS+PRRIALFVEPSPF+YVSGYKNRFQNFI+YLREMGDEVMVVTTHEGVP+EFYGAKL
Sbjct: 103 -TNSKPRRIALFVEPSPFAYVSGYKNRFQNFIRYLREMGDEVMVVTTHEGVPKEFYGAKL 161

Query: 173 IGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV 232
           IGSRSFPCP YQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLL VP+V
Sbjct: 162 IGSRSFPCPLYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLSVPLV 221

Query: 233 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 292
           MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS AIGKDLEA RVTAANKIR
Sbjct: 222 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSAAIGKDLEAERVTAANKIR 281

Query: 293 IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 352
           +W KGVDS SFHPRFRS EMR RLS GEPDKPLIVHVGR+GVEKSLDFLKR+MDRLPEAR
Sbjct: 282 LWNKGVDSVSFHPRFRSHEMRLRLSGGEPDKPLIVHVGRIGVEKSLDFLKRIMDRLPEAR 341

Query: 353 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 412
           IA +GDGPYREELEK+FTGMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct: 342 IAIVGDGPYREELEKIFTGMPAVFTGMLSGEELSQAYASGDVFVMPSESETLGLVVLEAM 401

Query: 413 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 472
           SSGIPV+G RAGG+PDIIP +QDGKIGYL+ PGD+DDCLSKL+PLL N+ELRETMG+AAR
Sbjct: 402 SSGIPVIGARAGGVPDIIPPEQDGKIGYLYTPGDVDDCLSKLKPLLENRELRETMGKAAR 461

Query: 473 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 525
           +EMEKYDW+AATRTIRNEQYNAAIWFWRKKRAQ LRP QWL KRIFPS+EV+Y
Sbjct: 462 EEMEKYDWKAATRTIRNEQYNAAIWFWRKKRAQFLRPFQWLFKRIFPSSEVSY 514

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090935|ref|XP_002309122.1| predicted protein [Populus trichocarpa] gi|222855098|gb|EEE92645.1| predicted protein [Populus trichocarpa]

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/436 (88%), Positives = 409/436 (93%), Gaps = 5/436 (1%)

Query: 89  QSNMTISEVREDEVEAP--LLDPEINENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKY 146
            ++MTISEVRE++ E P   LD    +  SRPRRIALFVEPSPF+YVSGYKNRFQNFIKY
Sbjct: 1   NNDMTISEVREEDEENPPPFLD---YDTISRPRRIALFVEPSPFAYVSGYKNRFQNFIKY 57

Query: 147 LREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPD 206
           LREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPD
Sbjct: 58  LREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPD 117

Query: 207 IIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAA 266
           IIHASSPGIMVFGAL IAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMW+++KFLHRAA
Sbjct: 118 IIHASSPGIMVFGALAIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWMILKFLHRAA 177

Query: 267 DLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLI 326
           DLTLVPS AIG+DLEAARVTAANKIR+W KGVDSESFHPRFRS+EMR RLSNGEP+KPLI
Sbjct: 178 DLTLVPSAAIGRDLEAARVTAANKIRLWNKGVDSESFHPRFRSNEMRMRLSNGEPEKPLI 237

Query: 327 VHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELS 386
           VHVGRLGVEKSLDFLKRVMDRLP ARIAFIGDGPYREELEKMFTG+PAVFTGML GEELS
Sbjct: 238 VHVGRLGVEKSLDFLKRVMDRLPGARIAFIGDGPYREELEKMFTGIPAVFTGMLGGEELS 297

Query: 387 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD 446
           QAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  RAGGIPDIIP +QDGK G+LFNPGD
Sbjct: 298 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVAARAGGIPDIIPPEQDGKTGFLFNPGD 357

Query: 447 LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQL 506
           LDDCLSKLEPLL NQELRETMG+AAR +MEKYDW+AAT+ IRNEQYNAAIWFWRKKRAQL
Sbjct: 358 LDDCLSKLEPLLDNQELRETMGKAARHDMEKYDWKAATKKIRNEQYNAAIWFWRKKRAQL 417

Query: 507 LRPIQWLAKRIFPSAE 522
           LRPIQWL KR+FPS E
Sbjct: 418 LRPIQWLVKRLFPSPE 433

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496170|ref|XP_003516943.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/534 (77%), Positives = 442/534 (82%), Gaps = 22/534 (4%)

Query: 1   MTTPSSLPINPSLSPPSLFAPSSTTPCYSKPSSRSSSSSFSFKVSSFNSSRTKPIFLNCK 60
           M   +SL INPSL+PP    P++ T   S   S    +S  F  S F S R KPI   C+
Sbjct: 1   MNNSTSLSINPSLTPP-FRLPATQTTTLSSSFSTFPQNSLRF--SCFQSFRPKPINPFCR 57

Query: 61  KFDYLRVNSEKSRKRLEGLVVRDSDNSRQSNMTISE-----VREDEVEAP---LLDPEIN 112
           K     +    S K  + LV+        +NMTI+E     V E+E   P   LLDPE  
Sbjct: 58  KARLCSLQGSTSVKSRKSLVLC------ATNMTIAEDSLLQVVEEEEGPPDFALLDPE-- 109

Query: 113 ENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKL 172
            +NSRPRRIALFVEPSPF+YVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVP+EFYGAKL
Sbjct: 110 -DNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPKEFYGAKL 168

Query: 173 IGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV 232
           IGSRSFPCPWYQKVPLSLALSPRIIS VA FKPDIIHASSPGIMVFGALIIAKLL VPIV
Sbjct: 169 IGSRSFPCPWYQKVPLSLALSPRIISAVAEFKPDIIHASSPGIMVFGALIIAKLLSVPIV 228

Query: 233 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 292
           MSYHTHVPVYIPRYTFSWLV+PMW VIKFLHRAADLTLVPS AI KDLE ARVTAANKI 
Sbjct: 229 MSYHTHVPVYIPRYTFSWLVQPMWWVIKFLHRAADLTLVPSAAIAKDLEEARVTAANKIC 288

Query: 293 IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR 352
           +W KGVDSESFHPRF+S EMR RLSNGEP+KPLIVHVGRLGVEKSLDFLK +MDRLPEAR
Sbjct: 289 LWNKGVDSESFHPRFKSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKSLMDRLPEAR 348

Query: 353 IAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 412
           IAFIGDGPYREELEKMF GMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAM
Sbjct: 349 IAFIGDGPYREELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAM 408

Query: 413 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 472
           SSGIPVVG RAGG+PDIIPEDQDGKIGYL+ PGDL+DCLSKL+PLL ++ELRETMG+AAR
Sbjct: 409 SSGIPVVGARAGGVPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLDDKELRETMGEAAR 468

Query: 473 QEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIF--PSAEVN 524
            EMEKYDWRAAT+ IRNE YNAAIWFWRKKRAQLLRP QWLA+RIF  P  E N
Sbjct: 469 LEMEKYDWRAATQKIRNENYNAAIWFWRKKRAQLLRPFQWLAQRIFQSPDPEAN 522

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568054|ref|XP_003552228.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/524 (78%), Positives = 441/524 (84%), Gaps = 16/524 (3%)

Query: 5   SSLPINPSLSPPSLFAPSSTTPCYSKPSSRSSSSSFSFKVSSFNSSRTKPIFLNCKKFDY 64
           +++ INPSLSPP  F   +TT     PS  SSSSSF      F+ S  KPI L+C+    
Sbjct: 4   TAITINPSLSPP--FCSKATT----PPSCSSSSSSFPPSFPRFHLSGAKPISLSCRG--- 54

Query: 65  LRVNSEKSRKRLEGLVVRDSDNSRQSNMTISEV---REDEVEAPLLDPEINENNSRPRRI 121
            R+   K  K L G   R S      NMT++EV    E E E  L+  E NENNSRPRRI
Sbjct: 55  TRLCFLKGSKTLWG---RKSFVLGAGNMTMAEVDSHEEGENEGALVGSE-NENNSRPRRI 110

Query: 122 ALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCP 181
           ALFVEPSPF+YVSGYKNRFQNFI+ LREMGDEVMVVTTHEGVPQEFYGAKLIGS SFPCP
Sbjct: 111 ALFVEPSPFAYVSGYKNRFQNFIRCLREMGDEVMVVTTHEGVPQEFYGAKLIGSWSFPCP 170

Query: 182 WYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV 241
            YQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV
Sbjct: 171 LYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV 230

Query: 242 YIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSE 301
           YIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI  DL AARVTAANKIR+W KGVDSE
Sbjct: 231 YIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIRLWNKGVDSE 290

Query: 302 SFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPY 361
            FHP++RS EMR RLSN EPDKPLI+HVGRLGVEKSLDFLKR+MDRLP+ARIAF+GDGPY
Sbjct: 291 KFHPKYRSHEMRLRLSNDEPDKPLIIHVGRLGVEKSLDFLKRLMDRLPDARIAFVGDGPY 350

Query: 362 REELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV 421
           REELEKMF GMPAVFTGML GEELSQAYASGDVFVMPSESETLG VVLEAMSSGIPVV  
Sbjct: 351 REELEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGFVVLEAMSSGIPVVAA 410

Query: 422 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWR 481
           RAGGIPDIIP DQDGK  YL++PGDL+DCLSKL PLL+N+ELRETMG+AAR+EMEKYDW+
Sbjct: 411 RAGGIPDIIPADQDGKTSYLYDPGDLEDCLSKLRPLLHNKELRETMGKAAREEMEKYDWK 470

Query: 482 AATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 525
           AATR IRNEQYNAAIWFWRKKRAQLLRP Q LAK  FPS +VNY
Sbjct: 471 AATRKIRNEQYNAAIWFWRKKRAQLLRPFQRLAKHFFPSPQVNY 514

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581077|ref|XP_002531354.1| glycosyltransferase, putative [Ricinus communis] gi|223529052|gb|EEF31038.1| glycosyltransferase, putative [Ricinus communis]

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/434 (89%), Positives = 404/434 (93%), Gaps = 10/434 (2%)

Query: 92  MTISEVREDEVEA-----PLLDPEINENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKY 146
           MTI E RE+E E      PLLD   +E NSRPRRIALFVEPSPF+YVSGYKNRFQNFI+Y
Sbjct: 1   MTIREFREEEEEEEENPPPLLD---SETNSRPRRIALFVEPSPFAYVSGYKNRFQNFIRY 57

Query: 147 LREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPD 206
           LREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPD
Sbjct: 58  LREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPD 117

Query: 207 IIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAA 266
           IIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWL+IKFLHRAA
Sbjct: 118 IIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAA 177

Query: 267 DLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLI 326
           DLTLVPSVAIGKDL+AARVTAANKIR+W KGVDSESFHPRF S EMRWRLSNGEPDKPLI
Sbjct: 178 DLTLVPSVAIGKDLQAARVTAANKIRLWNKGVDSESFHPRFCSHEMRWRLSNGEPDKPLI 237

Query: 327 VHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELS 386
           VHVGRLGVEKSLDFLKRVMDRLP ARIAFIGDGPYREELE+MF+GMPAVFTGML GEELS
Sbjct: 238 VHVGRLGVEKSLDFLKRVMDRLPGARIAFIGDGPYREELEEMFSGMPAVFTGMLGGEELS 297

Query: 387 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD 446
           QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG RAGGIPDIIP +Q+GK G+LFNPGD
Sbjct: 298 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPPEQEGKTGFLFNPGD 357

Query: 447 LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQL 506
           LDDCL KLEPLL N ELR+TMG+AAR+EMEKYDWRAATR IRNEQYNAAIWFWRKKRAQ 
Sbjct: 358 LDDCLGKLEPLLNNCELRKTMGKAAREEMEKYDWRAATRKIRNEQYNAAIWFWRKKRAQF 417

Query: 507 LRPIQWL--AKRIF 518
           LRPIQWL   KRI 
Sbjct: 418 LRPIQWLNMGKRIL 431

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481678|ref|XP_002278868.2| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase [Vitis vinifera]

 Score =  777 bits (2007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/484 (79%), Positives = 423/484 (87%), Gaps = 9/484 (1%)

Query: 43  KVSSFNSSRTKPIFLNCKKFDYLRVNSEKSRKRLEGLVVRDSDNSRQSNMTISEV-REDE 101
           ++ S   S  KPI L C++    R +  +   RL     R    + + +MTI+E+  EDE
Sbjct: 43  RLLSLYPSTAKPITLVCRQ---ARFSPSEGASRL-----RRRTLAAKGDMTITEMGEEDE 94

Query: 102 VEAPLLDPEINENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHE 161
            E        +E  SRPRRIALFVEPSPF+YVSGYKNRFQNFI+YLREMGDEVMVVTTHE
Sbjct: 95  EEESPPPSLESEATSRPRRIALFVEPSPFAYVSGYKNRFQNFIRYLREMGDEVMVVTTHE 154

Query: 162 GVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGAL 221
           GVPQEFYGAKLIGSRSFPCPWY+KVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGAL
Sbjct: 155 GVPQEFYGAKLIGSRSFPCPWYRKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGAL 214

Query: 222 IIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLE 281
            IAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI +DL+
Sbjct: 215 FIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIARDLQ 274

Query: 282 AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL 341
           AARVTAAN+IR+W KGVDSESFHPR+ S EMR RLSNGEP+KPL++HVGRLGVEKSLDFL
Sbjct: 275 AARVTAANRIRLWNKGVDSESFHPRYYSHEMRLRLSNGEPEKPLVIHVGRLGVEKSLDFL 334

Query: 342 KRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES 401
           KRVMDRLPEARIAFIGDGPYREELEKMF+GMPAVFTGML GEELSQAYASGDVFVMPSES
Sbjct: 335 KRVMDRLPEARIAFIGDGPYREELEKMFSGMPAVFTGMLQGEELSQAYASGDVFVMPSES 394

Query: 402 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 461
           ETLGLVVLEAMSSG+PVVG RAGGIPDIIP D +GK G+L+NPGD++DCLSKLEPLL++ 
Sbjct: 395 ETLGLVVLEAMSSGVPVVGARAGGIPDIIPRDDEGKTGFLYNPGDIEDCLSKLEPLLHSH 454

Query: 462 ELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSA 521
           ELRET+G+AAR+EMEKYDWRAATR IRNEQYNAAIWFWRKKRAQLLRP+QWL +  F + 
Sbjct: 455 ELRETIGKAAREEMEKYDWRAATRKIRNEQYNAAIWFWRKKRAQLLRPLQWLTRLFFRTP 514

Query: 522 EVNY 525
           E+NY
Sbjct: 515 EINY 518

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504282|ref|XP_003520926.1| PREDICTED: GDP-mannose-dependent alpha-mannosyltransferase-like [Glycine max]

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/514 (77%), Positives = 430/514 (83%), Gaps = 10/514 (1%)

Query: 12  SLSPPSLFAPSSTTPCYSKPSSRSSSSSFSFKVS-SFNSSRTKPIFLNCKKFDYLRVNSE 70
           SLSPP   +P++ T   S   S    +S  F  S SF      P    C+K  +  +   
Sbjct: 6   SLSPP-FCSPATFTTTPSSSLSTFPQNSLRFSCSQSFGPKAINPF---CRKARFCSLQGS 61

Query: 71  KSRKRLEGLVVRDSDNSRQSNMTISEVREDEV--EAPLLDPEINENNSRPRRIALFVEPS 128
            S K  + LV+   + +  ++  +  V E+E   +  LLDPE   +NSRPRRIALFVEPS
Sbjct: 62  TSVKSRKSLVLCAINMTIATDSLLQVVEEEEGPPDFALLDPE---DNSRPRRIALFVEPS 118

Query: 129 PFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPL 188
           PF+YVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVP+EFYGAKLIGSRSFPCPWYQKVPL
Sbjct: 119 PFAYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPKEFYGAKLIGSRSFPCPWYQKVPL 178

Query: 189 SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF 248
           SLALSPRIIS VA FKPDIIHASSPGIMVFGALIIAKLL VPIVMSYHTHVPVYIPRYTF
Sbjct: 179 SLALSPRIISAVAEFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTF 238

Query: 249 SWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR 308
           SWLV+PMW VIKFLHRAADLTLVPS AI KDLE ARVTAANKI +W KGVDSESFHPRF+
Sbjct: 239 SWLVQPMWWVIKFLHRAADLTLVPSAAIAKDLEEARVTAANKICLWNKGVDSESFHPRFK 298

Query: 309 SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKM 368
           S EMR RLSNGEP+KPLIVHVGRLGVEKSLDFLK +MDRLPEARIAFIGDGPYREELEKM
Sbjct: 299 SHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKSLMDRLPEARIAFIGDGPYREELEKM 358

Query: 369 FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD 428
           F GMPAVFTGML GEELS+AYASGDVFVMPSESETLGLVVLEAMSSGIPVVG RAGG+PD
Sbjct: 359 FEGMPAVFTGMLGGEELSEAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGVPD 418

Query: 429 IIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR 488
           IIPEDQDGKIGYL+ PGDL+DCLSKL+PLL ++ELRETMG+AAR EMEKYDWRAATR IR
Sbjct: 419 IIPEDQDGKIGYLYTPGDLEDCLSKLKPLLDDKELRETMGEAARLEMEKYDWRAATRKIR 478

Query: 489 NEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAE 522
           NE Y AAIWFWRKKRAQLLRP QWLA+ IFPS +
Sbjct: 479 NENYKAAIWFWRKKRAQLLRPFQWLAQPIFPSPD 512

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140379|ref|XP_002323560.1| predicted protein [Populus trichocarpa] gi|222868190|gb|EEF05321.1| predicted protein [Populus trichocarpa]

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/432 (87%), Positives = 397/432 (91%), Gaps = 3/432 (0%)

Query: 92  MTISEVREDEVEAPLLDPEINENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMG 151
           MT  EV EDE   P LD    E  SRPRRIALFVEPSPF+YVSGYKNRFQNFIK+LREMG
Sbjct: 1   MTRGEVGEDEENPPFLD---YETISRPRRIALFVEPSPFAYVSGYKNRFQNFIKFLREMG 57

Query: 152 DEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHAS 211
           DEVMVVTTHEGVPQEFYGAKLIGSRSFP PWYQKVPLSLALSPRIISEVARFKPDIIHAS
Sbjct: 58  DEVMVVTTHEGVPQEFYGAKLIGSRSFPFPWYQKVPLSLALSPRIISEVARFKPDIIHAS 117

Query: 212 SPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV 271
           SPGIMVFGAL IAKLL VPIVMSYHTHVPVYIPRYTFSWLVKPMW++IKFLHRAADLTLV
Sbjct: 118 SPGIMVFGALAIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVKPMWMIIKFLHRAADLTLV 177

Query: 272 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR 331
           PS AIG+DLEAARVTAANKIR+W KGVDSESFHPRFRS EMR RLSNGEP+KPLIVHVGR
Sbjct: 178 PSAAIGRDLEAARVTAANKIRVWNKGVDSESFHPRFRSHEMRMRLSNGEPEKPLIVHVGR 237

Query: 332 LGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYAS 391
           LGVEKSLDFLKRVMDRLP ARIA IGDGPYREELEKMFTGMPAVFTGML GEELSQAYAS
Sbjct: 238 LGVEKSLDFLKRVMDRLPGARIAIIGDGPYREELEKMFTGMPAVFTGMLGGEELSQAYAS 297

Query: 392 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCL 451
           GDVFVMPSESETLGLVVLEAMSSGIPVVG RAGGIPDIIP + DGK G+LFNPGDLDDCL
Sbjct: 298 GDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPPELDGKTGFLFNPGDLDDCL 357

Query: 452 SKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQ 511
           SKLEPLL NQELRET+G+AARQ+ EKYDW+AAT+ IRNEQY+AAIWFWR+ RAQL RPIQ
Sbjct: 358 SKLEPLLDNQELRETIGKAARQDTEKYDWKAATKKIRNEQYSAAIWFWRENRAQLFRPIQ 417

Query: 512 WLAKRIFPSAEV 523
           WL KR+FP  EV
Sbjct: 418 WLVKRLFPIPEV 429

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740238|emb|CBI30420.3| unnamed protein product [Vitis vinifera]

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/411 (88%), Positives = 391/411 (95%)

Query: 115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIG 174
            SRPRRIALFVEPSPF+YVSGYKNRFQNFI+YLREMGDEVMVVTTHEGVPQEFYGAKLIG
Sbjct: 25  TSRPRRIALFVEPSPFAYVSGYKNRFQNFIRYLREMGDEVMVVTTHEGVPQEFYGAKLIG 84

Query: 175 SRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMS 234
           SRSFPCPWY+KVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGAL IAKLLCVPIVMS
Sbjct: 85  SRSFPCPWYRKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALFIAKLLCVPIVMS 144

Query: 235 YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 294
           YHTHVPVYIPRYTFSWLVKPMWL+IKFLHRAADLTLVPS AI +DL+AARVTAAN+IR+W
Sbjct: 145 YHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIARDLQAARVTAANRIRLW 204

Query: 295 KKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIA 354
            KGVDSESFHPR+ S EMR RLSNGEP+KPL++HVGRLGVEKSLDFLKRVMDRLPEARIA
Sbjct: 205 NKGVDSESFHPRYYSHEMRLRLSNGEPEKPLVIHVGRLGVEKSLDFLKRVMDRLPEARIA 264

Query: 355 FIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS 414
           FIGDGPYREELEKMF+GMPAVFTGML GEELSQAYASGDVFVMPSESETLGLVVLEAMSS
Sbjct: 265 FIGDGPYREELEKMFSGMPAVFTGMLQGEELSQAYASGDVFVMPSESETLGLVVLEAMSS 324

Query: 415 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE 474
           G+PVVG RAGGIPDIIP D +GK G+L+NPGD++DCLSKLEPLL++ ELRET+G+AAR+E
Sbjct: 325 GVPVVGARAGGIPDIIPRDDEGKTGFLYNPGDIEDCLSKLEPLLHSHELRETIGKAAREE 384

Query: 475 MEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 525
           MEKYDWRAATR IRNEQYNAAIWFWRKKRAQLLRP+QWL +  F + E+NY
Sbjct: 385 MEKYDWRAATRKIRNEQYNAAIWFWRKKRAQLLRPLQWLTRLFFRTPEINY 435

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357468691|ref|XP_003604630.1| Glycogen synthase [Medicago truncatula] gi|355505685|gb|AES86827.1| Glycogen synthase [Medicago truncatula]

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/503 (76%), Positives = 422/503 (83%), Gaps = 12/503 (2%)

Query: 26  PCYSKPSSRSSSSSFSFKVS-SFNSSRTKPIFLNCKKFDYLRVNSEKSRKRLEGLVVRDS 84
           P  S  S+   SS+F+ + S  F +   KPI   CKK  +L + S KS KR      R S
Sbjct: 14  PFLSPISTTIHSSNFNSENSIRFRTFGAKPIIPFCKKTPFLSLESLKSVKR------RKS 67

Query: 85  DNSRQSNMTISEVR----EDEVEAPLLDPEINENNSRPRRIALFVEPSPFSYVSGYKNRF 140
                + MTI E       DE E P  D  +N+ +S+PRRIALFVEPSPFSYVSGYKNRF
Sbjct: 68  LKLEATKMTIDEESLLNSRDEEEGPP-DSVLNDIHSKPRRIALFVEPSPFSYVSGYKNRF 126

Query: 141 QNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEV 200
           QNFIKYLREMGDEVMVVTTHEGVP+EFYGA+LIGS+SFP PWYQKVPLSLALSPRIIS V
Sbjct: 127 QNFIKYLREMGDEVMVVTTHEGVPKEFYGAQLIGSKSFPFPWYQKVPLSLALSPRIISAV 186

Query: 201 ARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIK 260
           A+FKPDIIHASSPGIMVFGALIIAKLL VPIVMSYHTHVPVYIPRYTFSWLV+PMWLV+K
Sbjct: 187 AQFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWLVLK 246

Query: 261 FLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGE 320
           FLHRAADLTLVPSVAIGKDLE ARVT ANKIR+W KGVDSESF+P+++S EMR RLSNGE
Sbjct: 247 FLHRAADLTLVPSVAIGKDLEEARVTTANKIRLWNKGVDSESFNPKYKSHEMRLRLSNGE 306

Query: 321 PDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGML 380
           P+KPL++HVGRLGVEKSLDFLK VMDRLPEARIA +GDGPYREELEK+  GMP VFTGML
Sbjct: 307 PEKPLVIHVGRLGVEKSLDFLKSVMDRLPEARIAIVGDGPYREELEKLLEGMPVVFTGML 366

Query: 381 LGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY 440
            GEELSQAYASGDVF+MPSESETLG VV EA+SSGIPVVG RAGGIPDII EDQDGKIGY
Sbjct: 367 SGEELSQAYASGDVFIMPSESETLGQVVSEALSSGIPVVGARAGGIPDIITEDQDGKIGY 426

Query: 441 LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWR 500
           L+ PGDLDDCLSKL+PLL++ ELRETMG+AAR EMEKYDWR ATRTIRNE YN AIWFWR
Sbjct: 427 LYTPGDLDDCLSKLKPLLHDIELRETMGKAARIEMEKYDWREATRTIRNENYNTAIWFWR 486

Query: 501 KKRAQLLRPIQWLAKRIFPSAEV 523
           KK+AQLL P QWL K IFPS EV
Sbjct: 487 KKKAQLLLPFQWLTKHIFPSPEV 509

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	526
TAIR|locus:2150059	510	SQD2 "sulfoquinovosyldiacylgly	0.859	0.886	0.771	5.7e-194
TIGR_CMR|BA_5012	380	BA_5012 "glycosyl transferase,	0.663	0.918	0.321	4.2e-40
UNIPROTKB|Q8NT41	413	mgtA "GDP-mannose-dependent al	0.667	0.849	0.319	6.8e-40
UNIPROTKB|O06423	378	mgtA "GDP-mannose-dependent al	0.653	0.910	0.342	2.9e-39
UNIPROTKB|A0QRG8	375	mgtA "GDP-mannose-dependent al	0.576	0.808	0.352	2.4e-37
TIGR_CMR|CHY_1041	380	CHY_1041 "glycosyl transferase	0.684	0.947	0.268	3.6e-25
UNIPROTKB|A0R043	382	pimB "GDP-mannose-dependent al	0.353	0.486	0.341	2.4e-18
UNIPROTKB|A5U3B9	381	pimC "GDP-mannose-dependent al	0.306	0.422	0.358	3e-18
UNIPROTKB|P0CF99	381	pimC "GDP-mannose-dependent al	0.306	0.422	0.358	3e-18
TIGR_CMR|DET_0978	382	DET_0978 "glycosyl transferase	0.665	0.916	0.256	1.2e-17

TAIR|locus:2150059 SQD2 "sulfoquinovosyldiacylglycerol 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1879 (666.5 bits), Expect = 5.7e-194, P = 5.7e-194
 Identities = 354/459 (77%), Positives = 412/459 (89%)

Query:    69 SEKSRKRLEGLVVRDSDNSRQSNMTISEVRED---EVEAPLLDPEINENNSRPRRIALFV 125
             S+KS+ R  G++ +++  S  ++MTI++VRED   E++APLLDPE   + S+PRRIALFV
Sbjct:    55 SKKSKLRFCGVITKEAV-SGSNDMTITQVREDDESEIDAPLLDPE---SLSKPRRIALFV 110

Query:   126 EPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQK 185
             EPSPF+YVSGYKNRFQNFI+YLREMGDEV+VVTTHEGVP+EFYGA++IGSRSFPCP+YQK
Sbjct:   111 EPSPFAYVSGYKNRFQNFIRYLREMGDEVIVVTTHEGVPEEFYGARVIGSRSFPCPYYQK 170

Query:   186 VPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPR 245
             VPLSLALSPRIISE+ARFKPDIIHASSPG+MVFGAL IAK+L VPIVMSYHTHVPVYIPR
Sbjct:   171 VPLSLALSPRIISEIARFKPDIIHASSPGVMVFGALAIAKMLSVPIVMSYHTHVPVYIPR 230

Query:   246 YTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHP 305
             YTFSWLVKPMW +I+FLHRAADLTLVPS AIGKDL AA  TAAN++R+W KGVDSESF+P
Sbjct:   231 YTFSWLVKPMWSIIRFLHRAADLTLVPSAAIGKDLIAAGATAANQLRLWNKGVDSESFNP 290

Query:   306 RFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREEL 365
             RFRS EMR RLSNGEP+KPL++HVGR+GVEKSL+ LK VMD+LPEARIAFIGDGPY+E+L
Sbjct:   291 RFRSQEMRIRLSNGEPEKPLVIHVGRIGVEKSLELLKSVMDKLPEARIAFIGDGPYKEDL 350

Query:   366 EKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG 425
             EK+FTGMPAVFTG L G+ELSQAYASGDVFVMPSESETLGLVVLEAMSSG+PVV  RAGG
Sbjct:   351 EKLFTGMPAVFTGTLQGDELSQAYASGDVFVMPSESETLGLVVLEAMSSGLPVVAARAGG 410

Query:   426 IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR 485
             IPDIIPEDQ+GK G+LFNPGD++DC++KL  LL+++E RE +G+AAR+E EKYDWRAAT 
Sbjct:   411 IPDIIPEDQEGKTGFLFNPGDVEDCVTKLRTLLHDRETREIIGKAAREETEKYDWRAATT 470

Query:   486 TIRNEQYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVN 524
              IRNEQY+AAIWFWRKK+  +L PI WL KR+FP  E N
Sbjct:   471 KIRNEQYSAAIWFWRKKKVHVLGPINWLIKRLFPVPEGN 509

GO:0005886 "plasma membrane" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0008194 "UDP-glycosyltransferase activity" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA;IMP

GO:0046506 "sulfolipid biosynthetic process" evidence=TAS

GO:0046510 "UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TIGR_CMR|BA_5012 BA_5012 "glycosyl transferase, group 1 family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 118/367 (32%), Positives = 179/367 (48%)

Query:   120 RIALFVEP-SPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSF 178
             R+A+F +  +P   V+G     +   +Y ++      V          F  A +   RS 
Sbjct:     2 RVAIFTDTFTP--QVNGVAKTLERLTRYFQKEKIAYSVFAPQHTAEDNFV-ANVNKMRSI 58

Query:   179 PCP-WYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHT 237
             P    Y +   S   +PRI  E+  FKPD+IH ++P  M    L  AK L +P+V SYHT
Sbjct:    59 PLTILYPECRFSFP-TPRIRRELLSFKPDMIHIATPFNMGLCGLYYAKKLNIPVVGSYHT 117

Query:   238 HVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG 297
                 Y+  Y   +L   +W  +K+ H       VPS    + L   +      + IW +G
Sbjct:   118 DFDAYLRYYKIEFLSNMLWNYLKWFHSHMQKNFVPSP---ETLHQLKHKGFQALSIWGRG 174

Query:   298 VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR--IAF 355
             VD   FHP + ++E+ +R       K ++ +VGR+  EK +D L+ ++ +    R  I +
Sbjct:   175 VDCNLFHPAY-NTEI-FRKKYNITAKYVLSYVGRITPEKDIDTLQNLIVKSAHTRNDIHW 232

Query:   356 I--GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS 413
             +  GDGP    L +        FTG L G +L++AYA  ++ V PS +ET G VVLE+++
Sbjct:   233 LIAGDGPLATSLREAVPKTNVTFTGYLQGVDLAEAYACSNMMVFPSATETFGNVVLESLA 292

Query:   414 SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 473
              G PV+G  +GG+ +II    DGK G L  P + D  LS +  LL N+E  E MG AA  
Sbjct:   293 CGTPVIGANSGGVKNIIT---DGKTGVLCPPKNEDVFLSSIYSLLQNEEKLEQMGIAASS 349

Query:   474 EMEKYDW 480
               +   W
Sbjct:   350 YAKSKSW 356

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|Q8NT41 mgtA "GDP-mannose-dependent alpha-mannosyltransferase" [Corynebacterium glutamicum ATCC 13032 (taxid:196627)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 119/373 (31%), Positives = 182/373 (48%)

Query:   117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE----FYGAKL 172
             RP R+A+  E S    V+G  N     +++L+  G + +V+       +E    + G ++
Sbjct:     5 RPMRVAIVAE-SFLPNVNGVTNSVLRVLEHLKANGHDALVIAPGARDFEEEIGHYLGFEI 63

Query:   173 IGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV 232
             +   +   P    +P+ + L P + S +  + PDIIH +SP ++   A   A+ L +P +
Sbjct:    64 VRVPTVRVPLIDSLPIGVPL-PSVTSVLREYNPDIIHLASPFVLGGAAAFAARQLRIPAI 122

Query:   233 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 292
               Y T V  +  RY  + L    W  IK +H     TL PS      ++  R    N I 
Sbjct:   123 AIYQTDVAGFSQRYHLAPLATASWEWIKTVHNMCQRTLAPS---SMSIDELRDHGINDIF 179

Query:   293 IWKKGVDSESFHPRFRSSEMR--WRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE 350
              W +GVDS+ FHP  RS  +R  W  S     K ++  VGRL  EK ++ L  +  R  +
Sbjct:   180 HWARGVDSKRFHPGKRSVALRKSWDPSGA---KKIVGFVGRLASEKGVECLAGLSGR-SD 235

Query:   351 ARIAFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVL 409
              ++  +GDGP  + L++M   MP A+FTG L GEEL+  YAS D+FV P E ET    + 
Sbjct:   236 IQLVIVGDGPEAKYLQEM---MPDAIFTGALGGEELATTYASLDLFVHPGEFETFCQAIQ 292

Query:   410 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ 469
             EA +SG+P +G RAGG  D+I E   G  G L +  D  + L      + +      M  
Sbjct:   293 EAQASGVPTIGPRAGGPIDLINE---GVNGLLLDVVDFKETLPAAAEWILDDSRHSEMCA 349

Query:   470 AARQEMEKYDWRA 482
             AA + ++   W A
Sbjct:   350 AAWEGVKDKTWEA 362

GO:0000030 "mannosyltransferase activity" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

UNIPROTKB|O06423 mgtA "GDP-mannose-dependent alpha-mannosyltransferase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 126/368 (34%), Positives = 183/368 (49%)

Query:   120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLI-GSR-- 176
             R+A+  E S    V+G  N     +++LR  G E +V+   +  P E    +L  G R  
Sbjct:     5 RVAIVAE-SFLPQVNGVSNSVVKVLEHLRRTGHEALVIAP-DTPPGEDRAERLHDGVRVH 62

Query:   177 SFPCPWYQKVP-LSLALSP-RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMS 234
               P   + KV  L L +   R++  +  F PD++H +SP ++ +G L  A+ L VP V  
Sbjct:    63 RVPSRMFPKVTTLPLGVPTFRMLRALRGFDPDVVHLASPALLGYGGLHAARRLGVPTVAV 122

Query:   235 YHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 294
             Y T VP +   Y      +  W   + LHR AD TL PS A  + L A  +   ++   W
Sbjct:   123 YQTDVPGFASSYGIPMTARAAWAWFRHLHRLADRTLAPSTATMESLIAQGIPRVHR---W 179

Query:   295 KKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEARI 353
              +GVD + F P  R+  +R R S   PD KP++  VGRL  EK +D L  +       R+
Sbjct:   180 ARGVDVQRFAPSARNEVLRRRWS---PDGKPIVGFVGRLAPEKHVDRLTGLAAS-GAVRL 235

Query:   354 AFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM 412
               +GDG  R  L+   + MP AVFTG   G+EL++AYAS DVFV   E ET   VV EA+
Sbjct:   236 VIVGDGIDRARLQ---SAMPTAVFTGARYGKELAEAYASMDVFVHSGEHETFCQVVQEAL 292

Query:   413 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR 472
             +SG+PV+   AGG  D+I      + G L   G+ +  L      L ++  R  +  AAR
Sbjct:   293 ASGLPVIAPDAGGPRDLITPH---RTGLLLPVGEFEHRLPDAVAHLVHERQRYAL--AAR 347

Query:   473 QEMEKYDW 480
             + +    W
Sbjct:   348 RSVLGRSW 355

GO:0000030 "mannosyltransferase activity" evidence=IDA

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0040007 "growth" evidence=IMP

UNIPROTKB|A0QRG8 mgtA "GDP-mannose-dependent alpha-mannosyltransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 115/326 (35%), Positives = 168/326 (51%)

Query:   120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVT--THEGVP--QEFY-GAKL-- 172
             R+A+  E S    V+G  N     I +LR  G EV+V+   T  G P     + G ++  
Sbjct:     2 RVAIVAE-SFLPNVNGVTNSVLRVIDHLRRTGHEVLVIAPDTPRGQPPADRIHDGVRVHR 60

Query:   173 IGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV 232
             + SR FP      +PL +   PR+I  +  F PD++H +SP ++ +G L  A+ L VP V
Sbjct:    61 VPSRMFPK--ITSLPLGVP-RPRMIGVLRGFDPDVVHLASPALLGYGGLHAARHLGVPSV 117

Query:   233 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 292
               + T V  +   Y      +  W   + LH  AD TL PS +  ++L A R+   ++  
Sbjct:   118 AVFQTDVAGFAESYGMGVASRAAWAWTRHLHSRADRTLAPSTSAMENLAAHRIPRVHR-- 175

Query:   293 IWKKGVDSESFHPRFRSSEMRWRLSNGEPD-KPLIVHVGRLGVEKSLDFLKRVMDRLPEA 351
              W +GVD   F P  R   +R   S   PD +P++  VGRL  EK ++ L  V+    + 
Sbjct:   176 -WGRGVDITGFVPSARDEHLRRTWS---PDGRPIVGFVGRLAPEKHVERLA-VLAARDDL 230

Query:   352 RIAFIGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE 410
             ++  +GDG  R +L+   T +P AVFTG L G  L+ AYAS DVFV P E ET    V E
Sbjct:   231 QLVIVGDGVDRVKLQ---TVLPTAVFTGELRGAALAAAYASMDVFVHPGEHETFCQTVQE 287

Query:   411 AMSSGIPVVGVRAGGIPDIIPEDQDG 436
             AM+SG+PV+   AGG  D++   + G
Sbjct:   288 AMASGVPVIAPDAGGPRDLVAPCRTG 313

GO:0000030 "mannosyltransferase activity" evidence=ISS

GO:0009247 "glycolipid biosynthetic process" evidence=ISS

TIGR_CMR|CHY_1041 CHY_1041 "glycosyl transferase, group 1 family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 290 (107.1 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 105/391 (26%), Positives = 184/391 (47%)

Query:   120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDE-VMVVTTHEGVPQE--FYGAKLIGSR 176
             ++A+F + S   YVSG       F + L + G E +  +  +    +E  FY  +     
Sbjct:     2 KVAVFSD-SYHPYVSGVVRSIDLFQEELSQRGVEFIFFIPAYGNFKKEKGFY--RFF--- 55

Query:   177 SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH 236
             S P P  ++  L+L  S ++   +   K D+IH  SP ++        + L +P+V +YH
Sbjct:    56 SVPAPTNKEFHLALPFSFKVSKTLREEKVDLIHVHSPFLLGRLGQKTGRKLNIPVVFTYH 115

Query:   237 THVPVYIPRYTFSWLVK---PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRI 293
             T    Y+  + F+         W  ++F ++ + + + P+  I +D    +        I
Sbjct:   116 TLYEEYVHYFPFARKTARAVTSWYTLQFANKCSAV-ICPTETI-RDYLCQKGLKTRSAVI 173

Query:   294 WKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLP 349
                G+D E F  +  SS ++  LS     K + + VGR+  EK++DFL    + V   L 
Sbjct:   174 -PTGIDLEPFS-KADSSWLKTTLSL--KGKKVCLFVGRVAPEKNVDFLLESFRIVASTLN 229

Query:   350 EARIAFIGDGP----YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLG 405
             +  +  +G GP    Y+++ E++  G    F G +  E++   YA  D+F+ PS +ET G
Sbjct:   230 DVVLVIVGGGPELPHYQKKAEELGLGNSVKFIGPVPPEKVPLFYAGADLFLFPSVTETQG 289

Query:   406 LVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRE 465
             LV  EA ++G+P VGVRA G   ++    DG  G+L  P   +    K+  LL ++ LR+
Sbjct:   290 LVFAEAKAAGLPAVGVRAFGSKSMV---FDGVDGFLTGPNPREYA-EKVILLLRDEALRK 345

Query:   466 TMGQAARQEMEKYDWRAATRTIRNEQYNAAI 496
                Q AR+  + +  +  T  +  + Y + I
Sbjct:   346 LFSQNARKNAQNFS-KEYTARLMYDLYQSLI 375

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|A0R043 pimB "GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 244 (91.0 bits), Expect = 2.4e-18, P = 2.4e-18
 Identities = 71/208 (34%), Positives = 105/208 (50%)

Query:   297 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD----RLPEAR 352
             GVD++ F P    +  R R   G  D+P++V + RL   K  D L R +     R+P+  
Sbjct:   167 GVDTDRFAPD-PDARARMRERYGLGDRPVVVCLSRLVPRKGQDMLIRALPELRRRVPDTA 225

Query:   353 IAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSES------- 401
             +A +G GPY E L++M + +      VFT  +  EEL   +A  DVF MP  +       
Sbjct:   226 LAIVGGGPYLETLQRMASDLGVAEHVVFTRGIPAEELPAHHAMADVFAMPCRTRGAGLDV 285

Query:   402 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 461
             E LG+V LEA + G+PVV  R+GG P+ +    DGK G + +  D+D   + +  LL + 
Sbjct:   286 EGLGIVYLEASACGVPVVAGRSGGAPETV---LDGKTGTVVDGTDVDAITTAVGDLLADP 342

Query:   462 ELRETMGQAARQ-EMEKYDWRAATRTIR 488
                  MG A R   ++ + WR  TR  R
Sbjct:   343 RRAAAMGVAGRHWALDNWQWR--TRGAR 368

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0033164 "glycolipid 6-alpha-mannosyltransferase activity" evidence=IDA

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=IDA

UNIPROTKB|A5U3B9 pimC "GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase" [Mycobacterium tuberculosis H37Ra (taxid:419947)]

 Score = 243 (90.6 bits), Expect = 3.0e-18, P = 3.0e-18
 Identities = 61/170 (35%), Positives = 91/170 (53%)

Query:   269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH 328
             T+V +    ++ E  R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH
Sbjct:   149 TVVCTTGFARE-EFDRIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVH 204

Query:   329 VGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE 384
              GRL VEK    S+D L  + D   +AR+   G+GP R  LE+  TG+P  FTG +    
Sbjct:   205 CGRLSVEKHADRSIDALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRH 264

Query:   385 -LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 433
              ++   AS DV + P   ET GL  LE+++ G P V  R   + +II  D
Sbjct:   265 AVAGLLASADVALAPGPHETFGLAALESLACGTPAVVSRTSALTEIITAD 314

GO:0009247 "glycolipid biosynthetic process" evidence=ISS

GO:0033164 "glycolipid 6-alpha-mannosyltransferase activity" evidence=ISS

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=ISS

UNIPROTKB|P0CF99 pimC "GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 243 (90.6 bits), Expect = 3.0e-18, P = 3.0e-18
 Identities = 61/170 (35%), Positives = 91/170 (53%)

Query:   269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVH 328
             T+V +    ++ E  R+ A N + +   GVD ++FHPR R + +R   +   P + L+VH
Sbjct:   149 TVVCTTGFARE-EFDRIGATNTVTV-PLGVDLKTFHPRRRCARVRQHWAT--PTQILLVH 204

Query:   329 VGRLGVEK----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE 384
              GRL VEK    S+D L  + D   +AR+   G+GP R  LE+  TG+P  FTG +    
Sbjct:   205 CGRLSVEKHADRSIDALAALCDAGVDARLVIAGEGPLRARLERKATGLPIDFTGFISDRH 264

Query:   385 -LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 433
              ++   AS DV + P   ET GL  LE+++ G P V  R   + +II  D
Sbjct:   265 AVAGLLASADVALAPGPHETFGLAALESLACGTPAVVSRTSALTEIITAD 314

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0033164 "glycolipid 6-alpha-mannosyltransferase activity" evidence=IDA

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=IDA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IDA

GO:0047264 "heteroglycan alpha-mannosyltransferase activity" evidence=IDA

TIGR_CMR|DET_0978 DET_0978 "glycosyl transferase, group 1 family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 238 (88.8 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 101/393 (25%), Positives = 170/393 (43%)

Query:   123 LFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPW 182
             + V P  F+Y  G  N   +  K L+ +G +V ++      P E YG   I     P P 
Sbjct:     4 VLVCPYDFAYPGGVVNHVSSLYKELKMLGHDVRIIAPASKSPAE-YGTDFIRMGK-PRPL 61

Query:   183 -----YQKVPLSLALSPRIISEVARFKPDIIHASSPG-IMVFGALIIAKLLCVPIVMSYH 236
                    ++ LS+ L  RI   +   K D+IH   P  IM+  A++     C   V ++H
Sbjct:    62 AISGTVVRISLSVNLKNRIKQVLETEKFDVIHLHEPFMIMLCSAMLRFSKTCN--VATFH 119

Query:   237 THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD-LEAARVTAANKIRIWK 295
                    P Y   W   P   +  FL R     L   +A+ K  L  A         I  
Sbjct:   120 ASQGK--PGYNLGW---PFTRI--FLRRRRR-NLHGHMAVSKAALRFASKYIPGDYTIVP 171

Query:   296 KGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEA 351
              G+D + F+     +E++  +     DK  I+ VGR+   K LD+L     ++    P+ 
Sbjct:   172 NGIDLDLFN-----TEVQ-PVPEYLDDKLNILFVGRMESRKGLDYLIDAYAQIKPLCPQT 225

Query:   352 RIAFIGDG-P-----YREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSES-ET 403
             R+  +G G P     YR ++++   G+   VFTG +   EL + Y +  ++  P+   E+
Sbjct:   226 RLLVVGPGTPRQMSHYRSKVKRH--GLSDVVFTGGVACNELPRYYKTAHIYCSPATGQES 283

Query:   404 LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQEL 463
              G+V+LEAM+ G+P+V  +  G   ++    D K G L  P + D     L  L+   +L
Sbjct:   284 FGIVLLEAMALGVPIVASQIEGYQCVLT---DNKEGLLVPPKNSDKLAEALLKLIAQPDL 340

Query:   464 RETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 496
             R  +     + +++Y W+   + +  E Y+  +
Sbjct:   341 RSELSAGGLKTVQQYSWKRVAKKVE-EYYHLVL 372

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.4.1.246	LOW CONFIDENCE prediction!
3rd Layer	2.4.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	526
PLN02871	465	PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu	0.0
cd03814	364	cd03814, GT1_like_2, This family is most closely r	1e-127
cd03817	374	cd03817, GT1_UGDG_like, This family is most closel	6e-73
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	2e-68
cd03798	377	cd03798, GT1_wlbH_like, This family is most closel	2e-50
COG0438	381	COG0438, RfaG, Glycosyltransferase [Cell envelope	3e-43
cd03811	353	cd03811, GT1_WabH_like, This family is most closel	2e-39
cd03807	365	cd03807, GT1_WbnK_like, This family is most closel	2e-36
cd05844	367	cd05844, GT1_like_7, Glycosyltransferases catalyze	2e-35
cd03808	359	cd03808, GT1_cap1E_like, This family is most close	3e-34
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	8e-34
cd03800	398	cd03800, GT1_Sucrose_synthase, This family is most	2e-33
cd03799	355	cd03799, GT1_amsK_like, This is a family of GT1 gl	5e-33
cd03795	357	cd03795, GT1_like_4, This family is most closely r	2e-32
pfam00534	158	pfam00534, Glycos_transf_1, Glycosyl transferases	3e-32
cd03825	365	cd03825, GT1_wcfI_like, This family is most closel	6e-31
cd04962	371	cd04962, GT1_like_5, This family is most closely r	1e-30
cd03820	348	cd03820, GT1_amsD_like, This family is most closel	7e-30
cd03823	359	cd03823, GT1_ExpE7_like, This family is most close	2e-29
cd03821	375	cd03821, GT1_Bme6_like, This family is most closel	4e-29
cd03809	365	cd03809, GT1_mtfB_like, This family is most closel	6e-29
TIGR03088	374	TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH	3e-27
TIGR03999	374	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin	7e-25
cd03813	475	cd03813, GT1_like_3, This family is most closely r	7e-25
TIGR04063	397	TIGR04063, stp3, PEP-CTERM/exosortase A-associated	4e-24
cd01635	229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	1e-23
cd04951	360	cd04951, GT1_WbdM_like, This family is most closel	4e-23
cd03819	355	cd03819, GT1_WavL_like, This family is most closel	1e-22
TIGR02149	388	TIGR02149, glgA_Coryne, glycogen synthase, Coryneb	5e-22
cd03791	476	cd03791, GT1_Glycogen_synthase_DULL1_like, This fa	3e-19
TIGR03449	405	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate	2e-17
cd04949	372	cd04949, GT1_gtfA_like, This family is most closel	7e-17
TIGR04157	406	TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG	1e-16
pfam13579	158	pfam13579, Glyco_trans_4_4, Glycosyl transferase 4	1e-16
cd03812	358	cd03812, GT1_CapH_like, This family is most closel	2e-16
cd04946	407	cd04946, GT1_AmsK_like, This family is most closel	3e-16
TIGR04047	373	TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M	5e-16
COG0297	487	COG0297, GlgA, Glycogen synthase [Carbohydrate tra	1e-15
TIGR02095	473	TIGR02095, glgA, glycogen/starch synthase, ADP-glu	2e-15
cd04955	363	cd04955, GT1_like_6, This family is most closely r	7e-14
cd03792	372	cd03792, GT1_Trehalose_phosphorylase, Trehalose ph	4e-13
cd03804	351	cd03804, GT1_wbaZ_like, This family is most closel	8e-12
PRK15427	406	PRK15427, PRK15427, colanic acid biosynthesis glyc	1e-11
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	2e-11
PRK00654	466	PRK00654, glgA, glycogen synthase; Provisional	5e-11
pfam13692	134	pfam13692, Glyco_trans_1_4, Glycosyl transferases	2e-10
PRK15484	380	PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety	3e-10
TIGR02472	439	TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas	4e-10
cd03818	396	cd03818, GT1_ExpC_like, This family is most closel	4e-10
pfam13524	92	pfam13524, Glyco_trans_1_2, Glycosyl transferases	5e-10
TIGR04005	406	TIGR04005, wcaL, colanic acid biosynthesis glycosy	3e-09
cd03796	398	cd03796, GT1_PIG-A_like, This family is most close	4e-09
pfam13439	171	pfam13439, Glyco_transf_4, Glycosyltransferase Fam	3e-08
cd03822	366	cd03822, GT1_ecORF704_like, This family is most cl	4e-08
TIGR02470	784	TIGR02470, sucr_synth, sucrose synthase	3e-07
PRK09922	359	PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipo	4e-06
TIGR02918	500	TIGR02918, TIGR02918, accessory Sec system glycosy	1e-05
PRK14098	489	PRK14098, PRK14098, glycogen synthase; Provisional	2e-05
pfam13477	139	pfam13477, Glyco_trans_4_2, Glycosyl transferase 4	3e-05
PRK15179	694	PRK15179, PRK15179, Vi polysaccharide biosynthesis	5e-05
PRK15490	578	PRK15490, PRK15490, Vi polysaccharide biosynthesis	8e-05
cd03805	392	cd03805, GT1_ALG2_like, This family is most closel	2e-04
TIGR03087	397	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH	2e-04
PRK14099	485	PRK14099, PRK14099, glycogen synthase; Provisional	4e-04
PRK10307	412	PRK10307, PRK10307, putative glycosyl transferase;	7e-04
PLN00142	815	PLN00142, PLN00142, sucrose synthase	0.002
cd03806	419	cd03806, GT1_ALG11_like, This family is most close	0.004
PLN02939	977	PLN02939, PLN02939, transferase, transferring glyc	0.004

>gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

 Score =  839 bits (2169), Expect = 0.0
 Identities = 347/455 (76%), Positives = 391/455 (85%), Gaps = 1/455 (0%)

Query: 71  KSRKRLEGLVVRDSDNSRQSNMTISEVREDEVEAPLLDPEINENNSRPRRIALFVEPSPF 130
           K R    G     S + R + + +S  R    EAP    +  ++ SRPRRIALFVEPSPF
Sbjct: 12  KLRSGDAGRFSARSSSYRNAAVLVSVRRVASSEAPPPLLD-TDSRSRPRRIALFVEPSPF 70

Query: 131 SYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSL 190
           SYVSGYKNRFQNFI+YLREMGDEV+VVTT EGVPQEF+GAK+IGS SFPCP+YQKVPLSL
Sbjct: 71  SYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQEFHGAKVIGSWSFPCPFYQKVPLSL 130

Query: 191 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSW 250
           ALSPRIISEVARFKPD+IHASSPGIMVFGAL  AKLLCVP+VMSYHTHVPVYIPRYTFSW
Sbjct: 131 ALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSW 190

Query: 251 LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS 310
           LVKPMW +I+FLHRAADLTLV S A+GK+LEAA VTAAN+IR+W KGVDSESFHPRFRS 
Sbjct: 191 LVKPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSE 250

Query: 311 EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT 370
           EMR RLS GEP+KPLIV+VGRLG EK+LDFLKRVM+RLP AR+AF+GDGPYREELEKMF 
Sbjct: 251 EMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFA 310

Query: 371 GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII 430
           G P VFTGML G+ELSQAYASGDVFVMPSESETLG VVLEAM+SG+PVV  RAGGIPDII
Sbjct: 311 GTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDII 370

Query: 431 PEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNE 490
           P DQ+GK G+L+ PGD+DDC+ KLE LL + ELRE MG AAR+E+EK+DWRAATR +RNE
Sbjct: 371 PPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGAAAREEVEKWDWRAATRKLRNE 430

Query: 491 QYNAAIWFWRKKRAQLLRPIQWLAKRIFPSAEVNY 525
           QY+AAIWFWRKKRAQLL P+QWL  ++FP+ EVN 
Sbjct: 431 QYSAAIWFWRKKRAQLLGPVQWLPAQLFPAPEVNS 465

Length = 465

>gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  374 bits (963), Expect = e-127
 Identities = 143/369 (38%), Positives = 199/369 (53%), Gaps = 15/369 (4%)

Query: 120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFP 179
           RIA+  +      V+G     Q  +++LR  G EV+V+        E   A+++   S P
Sbjct: 1   RIAIVTDTFLPQ-VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGP-ARVVPVPSVP 58

Query: 180 CPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHV 239
            P Y ++ L+L    R+   +  F PD++H ++PG +   AL  A+ L +P+V SYHT  
Sbjct: 59  LPGYPEIRLALPPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDF 118

Query: 240 PVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD 299
           P Y+  Y    L    W  +++ H  AD  LVPS ++  +L A       ++R+W +GVD
Sbjct: 119 PEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRARGF---RRVRLWPRGVD 175

Query: 300 SESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE---ARIAFI 356
           +E FHPR R   +R RL  G PD+P++++VGRL  EK+L+ L      L      R+  +
Sbjct: 176 TELFHPRRRDEALRARL--GPPDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIV 233

Query: 357 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI 416
           GDGP R  LE         F G L GEEL+ AYAS DVFV PS +ET GLVVLEAM+SG+
Sbjct: 234 GDGPARARLEA--RYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGL 291

Query: 417 PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME 476
           PVV   AGG  DI+    DG+ G L  PGD +   + L  LL + ELR  M   AR E E
Sbjct: 292 PVVAPDAGGPADIV---TDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARARAEAE 348

Query: 477 KYDWRAATR 485
           +  W A   
Sbjct: 349 RRSWEAFLD 357

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364

>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  235 bits (603), Expect = 6e-73
 Identities = 117/373 (31%), Positives = 183/373 (49%), Gaps = 24/373 (6%)

Query: 120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVT-THEGVPQEFYGAKLIGSRSF 178
           +I +F + +    V+G     +   + L + G EV VV  ++ G P+E     +   R  
Sbjct: 1   KIGIFTD-TYLPQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVP 59

Query: 179 PCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTH 238
               Y    L L +   +I  +    PDI+H  +P  +    L +A+ L +P+V +YHT 
Sbjct: 60  T-FKYPDFRLPLPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTM 118

Query: 239 VPVYIPRYTFSWLVKP----MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIW 294
              Y        L+        L  +F +R  D  + PS  I   L    V     I + 
Sbjct: 119 YEDYTHYVPLGRLLARAVVRRKLSRRFYNRC-DAVIAPSEKIADLLREYGVKR--PIEVI 175

Query: 295 KKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPE 350
             G+D + F P     E R        D+P++++VGRL  EK++DFL     R++   P+
Sbjct: 176 PTGIDLDRFEPVDGDDERRKL--GIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPD 233

Query: 351 ARIAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSESETLGL 406
            ++  +GDGP REELE++   +      +FTG +  EEL   Y + D+FV  S +ET GL
Sbjct: 234 VKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGL 293

Query: 407 VVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET 466
           V+LEAM++G+PVV V A G+PD++    DG+ G+LF PGD +     L  LL + ELR  
Sbjct: 294 VLLEAMAAGLPVVAVDAPGLPDLV---ADGENGFLFPPGD-EALAEALLRLLQDPELRRR 349

Query: 467 MGQAARQEMEKYD 479
           + + A +  EK+ 
Sbjct: 350 LSKNAEESAEKFS 362

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score =  224 bits (573), Expect = 2e-68
 Identities = 123/380 (32%), Positives = 188/380 (49%), Gaps = 20/380 (5%)

Query: 120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTT-HEGVPQEFYGAKLIGSRSF 178
           +I L     P   V G +       + L   G EV V+T    G+P E     ++  R  
Sbjct: 1   KILLVTPEYP-PSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPP 59

Query: 179 PCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTH 238
           P    +++ L L L+ R+   + R + D++HA     ++  AL  A+LL +P+V++ H  
Sbjct: 60  PLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALA-ARLLGIPLVLTVH-G 117

Query: 239 VPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV 298
           +    P      L+K    + +   R AD  +  S A  ++L         KI +   GV
Sbjct: 118 LEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGV 177

Query: 299 DSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIA 354
           D+E F P  R+     R      D+P+I+ VGRL   K +D L     ++    P+ R+ 
Sbjct: 178 DTERFRPAPRA---ARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLV 234

Query: 355 FIGDGPYREELEKMFT--GMPA--VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE 410
            +GDGP REELE +    G+     F G +  E+L   YA+ DVFV+PS  E  GLV+LE
Sbjct: 235 IVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLE 294

Query: 411 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQA 470
           AM++G+PVV    GGIP+++   +DG+ G L  PGD +     +  LL + ELR  +G+A
Sbjct: 295 AMAAGLPVVASDVGGIPEVV---EDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEA 351

Query: 471 ARQE-MEKYDW-RAATRTIR 488
           AR+   E++ W R A RT  
Sbjct: 352 ARERVAERFSWDRVAARTEE 371

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  176 bits (449), Expect = 2e-50
 Identities = 109/372 (29%), Positives = 174/372 (46%), Gaps = 36/372 (9%)

Query: 131 SYVSGYKNRF-QNFIKYLREMGDEVMVVTTHEGVPQEF-------YGAKLIGSRSFPCPW 182
              +G    F +   + L + G EV V+      P+          G + +       P 
Sbjct: 10  PPNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPL 69

Query: 183 YQKVPLSLALSPRIISEVA--RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH-THV 239
            +   L L  +  ++  +   RF+PD+IHA       F A ++ + L +P+V++ H + V
Sbjct: 70  LKGPLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDV 129

Query: 240 PVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD 299
            +   +     L++          R AD  +  S A+  +L+A  +    K+ +   GVD
Sbjct: 130 NLLPRKRLLRALLRRAL-------RRADAVIAVSEALADELKALGIDP-EKVTVIPNGVD 181

Query: 300 SESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAF 355
           +E F P         R      DK +I+ VGRL   K +D+L     R++ + P+  +  
Sbjct: 182 TERFSPA---DRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVI 238

Query: 356 IGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEA 411
           +GDGP RE LE +   +       F G +  EE+   YA+ DVFV+PS  E  GLV+LEA
Sbjct: 239 VGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEA 298

Query: 412 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAA 471
           M+ G+PVV    GGIP+II    DG+ G L  PGD +     +  LL +  LR  +G+AA
Sbjct: 299 MACGLPVVATDVGGIPEII---TDGENGLLVPPGDPEALAEAILRLLADPWLR--LGRAA 353

Query: 472 RQEM-EKYDWRA 482
           R+ + E++ W  
Sbjct: 354 RRRVAERFSWEN 365

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377

>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]

 Score =  157 bits (398), Expect = 3e-43
 Identities = 128/386 (33%), Positives = 191/386 (49%), Gaps = 30/386 (7%)

Query: 120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFP 179
              L +   P   V G +       K LR +G     V        E  G +++   S  
Sbjct: 1   MKILILIIYPPPRVGGIERYVLELAKALRLLGRGH-EVLVIAPEKLEGLGIEVLRLPSVS 59

Query: 180 CPWYQKVPLSLALSPRIISEVARFKPDIIHASS--PGIMVFGALIIAKLLCVPIVMSYHT 237
            P    V L  AL   ++        DIIHA S         AL++ KLL +P+V++ H 
Sbjct: 60  LPLL-IVRLRPALLRLLLLLKRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHG 118

Query: 238 HVPVYIPRYTFSWLVKPMWLVIKFLHRA----ADLTLVPSVAIGKDLEAARVTAANKIRI 293
            +P  +       L+  + L++K L +A    AD  +  S A+ + LEA  V   NKI +
Sbjct: 119 LIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKELLEALGV--PNKIVV 176

Query: 294 WKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLP 349
              G+D+E F P       R  L   E  K ++++VGRL  EK LD L     ++  R P
Sbjct: 177 IPNGIDTEKFAP------ARIGLLP-EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGP 229

Query: 350 EARIAFIGDGPY-REELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSESETL 404
           + ++  +GDGP  REELEK+   +       F G +  EEL++  AS DVFV+PS SE  
Sbjct: 230 DIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGF 289

Query: 405 GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELR 464
           GLV+LEAM++G PV+    GGIP+++   +DG+ G L  PGD+++    LE LL + ELR
Sbjct: 290 GLVLLEAMAAGTPVIASDVGGIPEVV---EDGETGLLVPPGDVEELADALEQLLEDPELR 346

Query: 465 ETMGQAARQEM-EKYDWRAATRTIRN 489
           E +G+AAR+ + E++ W      +  
Sbjct: 347 EELGEAARERVEEEFSWERIAEQLLE 372

Length = 381

>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  146 bits (371), Expect = 2e-39
 Identities = 91/358 (25%), Positives = 143/358 (39%), Gaps = 48/358 (13%)

Query: 142 NFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVA 201
           N    L + G +V +V   +           +           K    L    R+   + 
Sbjct: 20  NLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLI-PVRVLKLKSLRDLLAILRLRRLLR 78

Query: 202 RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKF 261
           + KPD++ +           ++A  L   +++  H  + + + R         + L+I+ 
Sbjct: 79  KEKPDVVISHL-TTTPNVLALLAARLGTKLIVWEHNSLSLELKRK------LRLLLLIRK 131

Query: 262 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP 321
           L+R AD  +  S  + +DL        +KI +    +D E    R  + E         P
Sbjct: 132 LYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEI--RALAEE--PLELGIPP 187

Query: 322 DKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREELEKM--------- 368
           D P+I+ VGRL  +K  D L      +    P+AR+  +GDGP REELE +         
Sbjct: 188 DGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADR 247

Query: 369 --FTGM---PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 423
             F G    P  +        L  A    D+FV+ S  E    V+LEAM+ G PVV    
Sbjct: 248 VHFLGFQSNPYPY--------LKAA----DLFVLSSRYEGFPNVLLEAMALGTPVVATDC 295

Query: 424 GGIPDIIPEDQDGKIGYLFNPGD---LDDCLSKLEPLLYNQELRETMGQAARQEMEKY 478
            G  +I+   +DG+ G L   GD   L      L  LL + ELRE +  AAR+ + + 
Sbjct: 296 PGPREIL---EDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVARE 350

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353

>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  138 bits (351), Expect = 2e-36
 Identities = 87/358 (24%), Positives = 138/358 (38%), Gaps = 48/358 (13%)

Query: 142 NFIKYLREMGDEVMVVT-THEGVPQEFYGAKLIGSRSFPCPWY----QKVPLSLALSPRI 196
             +K L     E +V++ T  G      G +L        P Y    +          R+
Sbjct: 20  RLLKGLDRDRFEHVVISLTDRGE----LGEEL---EEAGVPVYCLGKRPGRPDPGALLRL 72

Query: 197 ISEVARFKPDIIHASSPGIMVFGALIIAKLLC--VPIVMSYHTHVPVYIPRYTFSWLVKP 254
              + R +PD++H       ++G   +A  L    P++                S L   
Sbjct: 73  YKLIRRLRPDVVHTWMYHADLYG--GLAARLAGVPPVIWGIRH-----------SDLDLG 119

Query: 255 MWLVIKFLHRAADLTLVPSVAI-----GKDLEAARVTAANKIRIWKKGVDSESFHPRFRS 309
                        L+    + +       +   A      KI +   GVD+E F P   +
Sbjct: 120 KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDA 179

Query: 310 SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREEL 365
                       D  LI  V RL  +K    L      ++ + P AR+  +GDGP R  L
Sbjct: 180 RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANL 239

Query: 366 EKMFT---GMPAVFTGMLLGE--ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG 420
           E +     G+       LLGE  ++     + DVFV+ S SE    V+LEAM+ G+PVV 
Sbjct: 240 ELLALKELGLEDKVI--LLGERSDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVA 297

Query: 421 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKY 478
              G   +++     G  G+L  PGD +     +E LL +  LR+ +G+AAR+ +E+ 
Sbjct: 298 TDVGDNAELV-----GDTGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEEN 350

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365

>gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score =  135 bits (343), Expect = 2e-35
 Identities = 94/320 (29%), Positives = 144/320 (45%), Gaps = 51/320 (15%)

Query: 193 SPRIISEVARFKPDIIHASSPGIMVFG-----ALIIAKLLCVPIVMSYH----THVPVYI 243
           +P++   + R +PD++HA       FG     AL +A+ L VP+V+++H    T     +
Sbjct: 71  APQLRRLLRRHRPDLVHAH------FGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL 124

Query: 244 PRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF 303
            R  ++          + L R A L +  S  I   L A       K+ +   GVD+  F
Sbjct: 125 LRSRWALY----ARRRRRLARRAALFIAVSQFIRDRLLALGFPPE-KVHVHPIGVDTAKF 179

Query: 304 HPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS-----LDFLKRVMDRLPEARIAFIGD 358
            P                  P I+ VGR  VEK      L+   R+  R+PE R+  IGD
Sbjct: 180 TPA-----------TPARRPPRILFVGRF-VEKKGPLLLLEAFARLARRVPEVRLVIIGD 227

Query: 359 GPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPS------ESETLGLVV 408
           GP    LE +   +       F G     E+ +      +F+ PS      ++E L +V+
Sbjct: 228 GPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVL 287

Query: 409 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG 468
           LEA +SG+PVV  R GGIP+ +   +DG+ G L   GD+    + L  LL + +LR  MG
Sbjct: 288 LEAQASGVPVVATRHGGIPEAV---EDGETGLLVPEGDVAALAAALGRLLADPDLRARMG 344

Query: 469 QAARQE-MEKYDWRAATRTI 487
            A R+   E++D R  T  +
Sbjct: 345 AAGRRRVEERFDLRRQTAKL 364

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367

>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  132 bits (334), Expect = 3e-34
 Identities = 97/378 (25%), Positives = 145/378 (38%), Gaps = 78/378 (20%)

Query: 140 FQNF----IKYLREMGDEVMVVTTHEGVPQEF--YGAKLIG---SRSFPCPWYQ-KVPLS 189
             +F    IK LR  G EV VV       +E    G K+I     R    P+   K  L 
Sbjct: 12  LYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIPLDRRGINPFKDLKALLR 71

Query: 190 LALSPRIISEVARFKPDIIHASS--PGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYT 247
           L    R++    + +PDI+H  +  PGI+     + A+L  VP V+ Y  H   ++    
Sbjct: 72  LY---RLL---RKERPDIVHTHTPKPGIL---GRLAARLAGVPKVI-YTVHGLGFVFTSG 121

Query: 248 FSWLVKPMWLVIKFLHRAA----DLTLVPSVAIGKDLEAARVTAANKIRIWK-KGVDSES 302
                     +   L R A    D  +  +           +    K  +    GVD + 
Sbjct: 122 -----GLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDR 176

Query: 303 FHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGD 358
           F P                D P+ + V RL  +K +D L    + +  + P  R+  +GD
Sbjct: 177 FSPS---------PEPIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGD 227

Query: 359 GPYREELEKM------------FTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESE 402
           G        +            F G    +P +                 DVFV+PS  E
Sbjct: 228 GDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAA-------------DVFVLPSYRE 274

Query: 403 TLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE 462
            L  V+LEAM+ G PV+     G  + +    DG  G+L  PGD +     +E L+ + E
Sbjct: 275 GLPRVLLEAMAMGRPVIATDVPGCREAV---IDGVNGFLVPPGDAEALADAIERLIEDPE 331

Query: 463 LRETMGQAARQEME-KYD 479
           LR  MGQAAR+  E ++D
Sbjct: 332 LRARMGQAARKRAEEEFD 349

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  131 bits (332), Expect = 8e-34
 Identities = 97/392 (24%), Positives = 160/392 (40%), Gaps = 50/392 (12%)

Query: 134 SGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFY----------GAKLIGSRSFPCPWY 183
            G   R     + L + G EV V+T     P              G ++      P   Y
Sbjct: 14  GGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPP---Y 70

Query: 184 QKVP--------LSLALSPRIISEVARFKPDIIHASSPGIMV-FGALIIAKLLCVPIVMS 234
           +K          LS ALS  +     R +PD+I A+SP +++   AL++A+L   P V  
Sbjct: 71  KKNGLLKRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFV-- 128

Query: 235 YHTH---VPVYIPRYTF---SWLVKPM-WLVIKFLHRAADLTLVPSVAIGKDLEAARVTA 287
                      +        S L + +  L  + ++R AD  +V S  + + L    V  
Sbjct: 129 LEVRDLWPESAVALGLLKNGSLLYRLLRKLE-RLIYRRADAIVVISPGMREYLVRRGV-P 186

Query: 288 ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR 347
             KI +   GVD E F P    ++   R   G  DK ++++ G +G  + LD L      
Sbjct: 187 PEKISVIPNGVDLELFKPP--PADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAAAL 244

Query: 348 L---PEARIAFIGDGPYREELEKMFTGMPA---VFTGMLLGEELSQAYASGDVFVMP-SE 400
           L   P+ R   +GDGP +EEL+++   +      F G +  EEL +  A+ DV ++P   
Sbjct: 245 LKDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKP 304

Query: 401 SETLGLVV----LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEP 456
                 V      E M++G PV+    G   +++   ++   G +  PGD +   + +  
Sbjct: 305 GPAFEGVSPSKLFEYMAAGKPVLASVDGESAELV---EEAGAGLVVPPGDPEALAAAILE 361

Query: 457 LLYNQELRETMGQAARQ-EMEKYDWRAATRTI 487
           LL + E R  MG+  R+   EK+        +
Sbjct: 362 LLDDPEERAEMGENGRRYVEEKFSREKLAERL 393

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  130 bits (330), Expect = 2e-33
 Identities = 96/307 (31%), Positives = 138/307 (44%), Gaps = 37/307 (12%)

Query: 205 PDIIHA----SSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFS---WLVKPMWL 257
           PD+IHA    S    +V  AL++A+ L +P+V ++H+   +   +          +P   
Sbjct: 102 PDLIHAHYWDSG---LV--ALLLARRLGIPLVHTFHS---LGAVKRRHLGAADTYEPARR 153

Query: 258 VI--KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWR 315
           +   + L RAAD  +  +    ++L +       +IR+   GVD E F P  R+   R R
Sbjct: 154 IEAEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRAR 213

Query: 316 LSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR-----------IAFIGDGPY--R 362
           L   +PDKP I+ VGRL   K +D L R    LPE R              I        
Sbjct: 214 LLR-DPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEEL 272

Query: 363 EELEKMFTGMPAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV 421
            EL +    +  V F G +  E+L   Y + DVFV P+  E  GL  LEAM+ G+PVV  
Sbjct: 273 RELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVAT 332

Query: 422 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDW 480
             GG  DI+    DG  G L +P D +   + L  LL +  LR  + +A  +     Y W
Sbjct: 333 AVGGPRDIV---VDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARARYTW 389

Query: 481 -RAATRT 486
            R A R 
Sbjct: 390 ERVAARL 396

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398

>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria

 Score =  128 bits (325), Expect = 5e-33
 Identities = 94/349 (26%), Positives = 146/349 (41%), Gaps = 48/349 (13%)

Query: 144 IKYLREMGDEVMVVTT-HEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSP---RIISE 199
           I  L   G EV + +             +   +R      Y  +  SLAL      +  E
Sbjct: 21  ILALEAAGHEVEIFSLRPPEDTLVHPEDRAELAR----TRY--LARSLALLAQALVLARE 74

Query: 200 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVI 259
           + R   D IHA         A++ ++L  +P   + H    ++           P  + +
Sbjct: 75  LRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKD-IF---------RSPDAIDL 124

Query: 260 KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG 319
                 AD  +  S    + L        +KI +   GVD E F PR             
Sbjct: 125 DEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPR---------PPPP 175

Query: 320 EPDKPLIVHVGRLGVEK-----SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT--GM 372
             +   I+ VGRL VEK      L+ L  + DR  + R+  +GDGP R+ELE +    G+
Sbjct: 176 PGEPLRILSVGRL-VEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGL 234

Query: 373 PAV--FTGMLLGEELSQAYASGDVFVMPS------ESETLGLVVLEAMSSGIPVVGVRAG 424
                  G    EE+ +   + D+FV+PS      + E L +V++EAM+ G+PV+     
Sbjct: 235 EDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS 294

Query: 425 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 473
           GIP+++   +DG+ G L  PGD +     +E LL + ELR  MG+A R 
Sbjct: 295 GIPELV---EDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRA 340

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355

>gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  127 bits (321), Expect = 2e-32
 Identities = 98/342 (28%), Positives = 148/342 (43%), Gaps = 38/342 (11%)

Query: 147 LREMGDEVMVVTTH---EGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVA-- 201
           L   G EV V+      +G  +E  G ++I + S           S   SP    ++   
Sbjct: 27  LAARGIEVAVLCASPEPKGRDEERNGHRVIRAPSL------LNVASTPFSPSFFKQLKKL 80

Query: 202 RFKPDIIHASSPGIMVFGALIIAKLLC---VPIVMSYHTHVPVYIPRYTFSWLVKPMWLV 258
             K D+IH   P  +      +A LL     P+V+ +H+ +   + +     L +P  L 
Sbjct: 81  AKKADVIHLHFPNPLAD----LALLLLPRKKPVVVHWHSDI---VKQKLLLKLYRP--LQ 131

Query: 259 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF-HPRFRSSEMRWRLS 317
            +FL RA D  +  S    +     R    +K+R+   G+D   +  P      +  R  
Sbjct: 132 RRFLRRA-DAIVATSPNYAETSPVLR-RFRDKVRVIPLGLDPARYPRPDALEEAIWRR-- 187

Query: 318 NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT---GMPA 374
                +P  + VGRL   K LD L      LP+A +  +G+GP   ELE +      +  
Sbjct: 188 --AAGRPFFLFVGRLVYYKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDR 245

Query: 375 V-FTGMLLGEELSQAYASGDVFVMPS--ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIP 431
           V F G L  EE +   A+ DVFV PS   SE  G+V+LEAM+ G PV+    G     + 
Sbjct: 246 VRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYV- 304

Query: 432 EDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 473
            +  G  G +  PGD       +  LL + ELRE +G+AAR+
Sbjct: 305 -NLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARE 345

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357

>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1

 Score =  120 bits (304), Expect = 3e-32
 Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 11/160 (6%)

Query: 322 DKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKM--FTGMPA- 374
           DKP+I+ VGRL  EK LD L      L    P  ++  +GDG   ++L+K+    G+   
Sbjct: 1   DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDN 60

Query: 375 -VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 433
            +F G +  E+L + Y   D+FV+PS  E  GLV+LEAM++G+PV+    GG  +I+   
Sbjct: 61  VIFVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIV--- 117

Query: 434 QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 473
           +DG+ G L +PGD +     +E LL ++ELRE +G+ AR+
Sbjct: 118 KDGETGLLVDPGDAEALAEAIEKLLKDEELRERLGENARK 157

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  123 bits (310), Expect = 6e-31
 Identities = 91/315 (28%), Positives = 134/315 (42%), Gaps = 51/315 (16%)

Query: 195 RIISEVARFKPDIIHASSPGIMVFGAL---IIAKLLC-VPIVMSYH-----T---HVPVY 242
            +IS++     DI+H      +  G L    ++KLL   P+V + H     T   H P  
Sbjct: 42  ALISKIEIINADIVHL---HWIHGGFLSIEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGG 98

Query: 243 IPRYTFS-----------------WLVKPMWLVIKFLHRAADLTLV-PSVAIGKDLEAAR 284
             RY                    W+    W   +      +LT+V PS  +     ++ 
Sbjct: 99  CDRYKTECGNCPQLGSYPEKDLSRWI----WRRKRKAWADLNLTIVAPSRWLADCARSSS 154

Query: 285 VTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE---KSLDFL 341
           +     I +   G+D+  F PR +  E R RL     DK +I+  G +G     K  D L
Sbjct: 155 LFKGIPIEVIPNGIDTTIFRPRDKR-EARKRL-GLPADKKIIL-FGAVGGTDPRKGFDEL 211

Query: 342 KRVMDRLPEA---RIAFIGDGPYREELEKMFTGMPAVFTGMLLGEE-LSQAYASGDVFVM 397
              + RL E     I  +  G    E+       P  + G L  +E L+  Y++ DVFV+
Sbjct: 212 IEALKRLAERWKDDIELVVFGASDPEIPPDL-PFPVHYLGSLNDDESLALIYSAADVFVV 270

Query: 398 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL 457
           PS  E      +EA++ G PVV    GGIPDI+     G  GYL  PGD +D    +E L
Sbjct: 271 PSLQENFPNTAIEALACGTPVVAFDVGGIPDIV---DHGVTGYLAKPGDPEDLAEGIEWL 327

Query: 458 LYNQELRETMGQAAR 472
           L + + RE +G+AAR
Sbjct: 328 LADPDEREELGEAAR 342

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365

>gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  122 bits (309), Expect = 1e-30
 Identities = 85/337 (25%), Positives = 145/337 (43%), Gaps = 75/337 (22%)

Query: 181 PWYQKVPLSLALSPRIISEVARFKPDIIHA------SSPGIMVFGALIIAKLLCVPIVMS 234
           P +Q  P  LAL+ +I     R+K D++H       +    +      I     +P+V +
Sbjct: 61  PLFQYPPYDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLARE---ILGKKDLPVVTT 117

Query: 235 YH-THV------PVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTA 287
            H T +      P + P   FS            + ++  +T V      +  E   +T 
Sbjct: 118 LHGTDITLVGQDPSFQPATRFS------------IEKSDGVTAVSESLRQETYELFDIT- 164

Query: 288 ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDF--LKRVM 345
             +I +    VD + F P+   +  R         + +++H+         +F  +KR+ 
Sbjct: 165 -KEIEVIPNFVDEDRFRPKPDEALKRRLG--APEGEKVLIHIS--------NFRPVKRID 213

Query: 346 D----------RLPEARIAFIGDGPYREELEKMFTGMPAVFTGML-----LG--EELSQA 388
           D           +P AR+  +GDGP R   E++     A   G+      LG  + + + 
Sbjct: 214 DVIRIFAKVRKEVP-ARLLLVGDGPERSPAERL-----ARELGLQDDVLFLGKQDHVEEL 267

Query: 389 YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLD 448
            +  D+F++PSE E+ GL  LEAM+ G+PVV   AGGIP+++   + G+ G+L + GD++
Sbjct: 268 LSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVV---KHGETGFLVDVGDVE 324

Query: 449 DCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR 485
                   LL + EL +   +AAR        RAA R
Sbjct: 325 AMAEYALSLLEDDELWQEFSRAAR-------NRAAER 354

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371

>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  119 bits (301), Expect = 7e-30
 Identities = 85/362 (23%), Positives = 141/362 (38%), Gaps = 62/362 (17%)

Query: 142 NFIKYLREMGDEVMVVTTHEGVPQEFY----GAKLIGSRSFPCPWYQKVPLSLALSPRII 197
           N    L E G EV +++  +G    FY      K+I                L    R+ 
Sbjct: 21  NLANALAEKGHEVTIISLDKG-EPPFYELDPKIKVIDLGDKRDSKLLARFKKLR---RLR 76

Query: 198 SEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWL 257
             +   KPD++ +    ++ F  L    L  V +++S H     Y  R     L      
Sbjct: 77  KLLKNNKPDVVISFLTSLLTF--LASLGLKIVKLIVSEHNSPDAYKKRLRRLLL------ 128

Query: 258 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRI---WKKGVDSESFHPRFRSSEMRW 314
             + L+R AD  +V +     D           + +            F P   SS+++ 
Sbjct: 129 -RRLLYRRADAVVVLTEE---DRALYYKKFNKNVVVIPNPL------PFPPEEPSSDLK- 177

Query: 315 RLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREELEKM-- 368
                      I+ VGRL  +K  D L     ++  + P+ ++  +GDGP RE LE +  
Sbjct: 178 --------SKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIK 229

Query: 369 -------FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV 421
                     +          + + + YA   +FV+ S  E   +V+LEAM+ G+PV+  
Sbjct: 230 ELGLEDRVILLGFT-------KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISF 282

Query: 422 RA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW 480
               G  +II   +DG  G L   GD++     L  L+ ++ELR+ MG  AR+  E++  
Sbjct: 283 DCPTGPSEII---EDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANARESAERFSI 339

Query: 481 RA 482
             
Sbjct: 340 EN 341

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348

>gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  118 bits (299), Expect = 2e-29
 Identities = 93/345 (26%), Positives = 144/345 (41%), Gaps = 48/345 (13%)

Query: 147 LREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALS-------PRIISE 199
           L + G EV V+T  E  P++      +     P     +  L   L        P +++E
Sbjct: 28  LAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDYDNPAVVAE 87

Query: 200 VAR----FKPDIIHASSPGIMVFGALI--IAKLLCVPIVMSYHTHVPVYIPRYTFSWLVK 253
            AR    F+PD++H     +   G  I   A+   +PIV++ H +           WL+ 
Sbjct: 88  FARLLEDFRPDVVHFHH--LQGLGVSILRAARDRGIPIVLTLHDY-----------WLIC 134

Query: 254 PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMR 313
           P         +  D  + PS  +  D   A    A KI + + G+D +      R+    
Sbjct: 135 P---RQGLFKKGGDAVIAPSRFL-LDRYVANGLFAEKISVIRNGIDLDRAKRPRRAP--- 187

Query: 314 WRLSNGEPDKPLIV-HVGRLGVEKSLDFLKRVMDRLPEARIAFI--GDGPYREELEKMFT 370
                  P   L    +G+L   K +D L     RLP   I  +  G+G   EE      
Sbjct: 188 -------PGGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELE 240

Query: 371 GMPAV-FTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIPD 428
           G P V F G    EE+   YA  DV V+PS   E   LV+ EA+++G+PV+    GG+ +
Sbjct: 241 GDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAE 300

Query: 429 IIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ 473
           ++   +DG  G LF PGD +D  + LE L+ + +L E +      
Sbjct: 301 LV---RDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIEP 342

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359

>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  118 bits (297), Expect = 4e-29
 Identities = 92/361 (25%), Positives = 139/361 (38%), Gaps = 44/361 (12%)

Query: 147 LREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPL-----SLALSPRIISEVA 201
           L ++G EV V TT  G         L G             L         S      + 
Sbjct: 27  LAKLGHEVTVATTDAGGDPL--LVALNGVPVKLFSINVAYGLNLARYLFPPSLLAWLRLN 84

Query: 202 RFKPDIIHASSPGI---MVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLV 258
             + DI+H    G+       A   A+   +P V+S H  +  +   +    L K +   
Sbjct: 85  IREADIVHVH--GLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH--KALKKRLAWF 140

Query: 259 I---KFLHRAADLTLVPSVAIGKDLEAARVT---AANKIRIWKKGVDSESFHPRFRSSEM 312
           +   + L  AA +            EAA +        I +   GVD   F         
Sbjct: 141 LFERRLLQAAAAVHATSEQ------EAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRGRR 194

Query: 313 RWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM----DRLPEARIAFIG--DGPYREELE 366
           R       PDK +I+ +GRL  +K LD L        +R P+  +   G  +G YR EL+
Sbjct: 195 RKF--PILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELK 252

Query: 367 KMFT---GMPAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR 422
           ++         V FTGML GE+ + A A  D+FV+PS SE  G+VV EA++ G PVV   
Sbjct: 253 QIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTD 312

Query: 423 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ-EMEKYDWR 481
                ++I        G++ +    D   + L   L   +  + MG+  R    E++ W 
Sbjct: 313 KVPWQELIEYG----CGWVVDDDV-DALAAALRRALELPQRLKAMGENGRALVEERFSWT 367

Query: 482 A 482
           A
Sbjct: 368 A 368

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375

>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  117 bits (295), Expect = 6e-29
 Identities = 77/355 (21%), Positives = 133/355 (37%), Gaps = 23/355 (6%)

Query: 142 NFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVA 201
             ++ L ++  E +++             +         P      L   L       + 
Sbjct: 23  ELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLLLL 82

Query: 202 RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKF 261
               D++H+            + +L  VP+V++ H  +P+  P Y      +    +++ 
Sbjct: 83  LLGLDLLHSPHNT------APLLRLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRR 136

Query: 262 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP 321
             R AD  +  S A  +DL        +KI +   GVD     P   +  +R        
Sbjct: 137 ALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYL---L 193

Query: 322 DKPLIVHVGRLGVEKSLDFLKRVMDRLPEA----RIAFIG-DGPYREELEKMFTGMPA-- 374
            +P  ++VG +   K+L+ L     RLP      ++  +G  G   EEL      +    
Sbjct: 194 PRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGD 253

Query: 375 --VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE 432
              F G +  EEL+  Y     FV PS  E  GL VLEAM+ G PV+      +P++   
Sbjct: 254 RVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVA-- 311

Query: 433 DQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI 487
              G     F+P D +   + +E LL +  LRE + +      +++ W    R  
Sbjct: 312 ---GDAALYFDPLDPEALAAAIERLLEDPALREELRERGLARAKRFSWEKTARRT 363

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365

>gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score =  112 bits (282), Expect = 3e-27
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 42/318 (13%)

Query: 190 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIP---RY 246
           +A+ P++   + + +PDI+H  +  +    A + A L  VP  +       V+      +
Sbjct: 67  VAVYPQLYRLLRQLRPDIVH--TRNLAALEAQLPAALAGVPARIHGEHGRDVFDLDGSNW 124

Query: 247 TFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEA-----ARVTAANKIRIWKKGVDSE 301
            + WL +   L    +H          VA+ +DLE       +V  A   +I+  GVD+E
Sbjct: 125 KYRWLRR---LYRPLIHHY--------VAVSRDLEDWLRGPVKVPPAKIHQIYN-GVDTE 172

Query: 302 SFHPRFRSSEMRWRLSN---GEPDKPLIVHVGRLGVEKSLDFLKR----VMDRLPE---- 350
            FHP   S   R  +        +  ++  VGRL   K    L R    ++ +LPE    
Sbjct: 173 RFHP---SRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAER 229

Query: 351 ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGE--ELSQAYASGDVFVMPSESETLGLVV 408
            R+  +GDGP R   E+M           L GE  ++     + D+FV+PS +E +   +
Sbjct: 230 LRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTI 289

Query: 409 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG 468
           LEAM+SG+PV+    GG P+++   Q G  G L  PGD       L+P + +   R   G
Sbjct: 290 LEAMASGLPVIATAVGGNPELV---QHGVTGALVPPGDAVALARALQPYVSDPAARRAHG 346

Query: 469 QAARQEME-KYDWRAATR 485
            A R   E ++   A   
Sbjct: 347 AAGRARAEQQFSINAMVA 364

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374

>gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA

 Score =  105 bits (265), Expect = 7e-25
 Identities = 80/321 (24%), Positives = 150/321 (46%), Gaps = 58/321 (18%)

Query: 181 PWYQKVPLSLALSPRIISEVAR-FKPDIIHA------SSPGIM---VFGALIIAKLLCVP 230
           P +Q  P  LAL+ +I  EVA+  K D++H       +    +   + G   I     +P
Sbjct: 61  PLFQYPPYDLALASKIA-EVAKEEKLDLLHVHYAIPHAIAAYLARQMLGKEGID----IP 115

Query: 231 IVMSYH-THVPV--YIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD-LEAARVT 286
           IV + H T + +    P +      KP    ++F    +D     S ++ ++  E   + 
Sbjct: 116 IVTTLHGTDITLVGADPSF------KP---AVRFSIEKSDGVTAVSESLKEETYELFDID 166

Query: 287 AANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDF--LKRV 344
               I +    VD++ +  +     ++ +L     D+ +++H+         +F  +KRV
Sbjct: 167 --KPIEVIPNFVDTDRYRRK-NDPALKRKLGAP-EDEKVLIHIS--------NFRPVKRV 214

Query: 345 MD----------RLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLG--EELSQAYASG 392
            D           +P A++  +GDGP R   E++   +      + LG  +++++  +  
Sbjct: 215 EDVIEVFARVQQEVP-AKLLLVGDGPERSPAEQLVRELGLTDRVLFLGKQDDVAELLSIS 273

Query: 393 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLS 452
           D+F++PSE E+ GL  LEAM+ G+PV+   AGGIP+++   + G  G+L + GD++    
Sbjct: 274 DLFLLPSEKESFGLAALEAMACGVPVIASNAGGIPEVV---EHGVTGFLCDVGDVETMAE 330

Query: 453 KLEPLLYNQELRETMGQAARQ 473
               LL ++EL +    AAR+
Sbjct: 331 YAISLLEDEELLQRFSAAARE 351

Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374

>gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  106 bits (268), Expect = 7e-25
 Identities = 82/326 (25%), Positives = 133/326 (40%), Gaps = 69/326 (21%)

Query: 196 IISEVARFKP--DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI-PRY------ 246
           +++ +AR  P  D+ HA S G       +       P +++ H    +Y   R       
Sbjct: 163 LLAAIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHG---IYTRERKIELLQA 219

Query: 247 -TFSWLVKPMWL-----VIKFLHRAAD--LTLVPS-----VAIGKDLEAARVTAANKIRI 293
                  + +W+     + +  ++AAD   TL        +  G D E        KIR+
Sbjct: 220 DWEMSYFRRLWIRFFESLGRLAYQAADRITTLYEGNRERQIEDGADPE--------KIRV 271

Query: 294 WKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL----GVEKSLDFLKRVMDRLP 349
              G+D E F P         R +  E + P++  +GR+     ++  +     V  ++P
Sbjct: 272 IPNGIDPERFAPA--------RRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIP 323

Query: 350 EARIAFIG----DGPYREE---------LEKMFTGMPAVFTGMLLGEELSQAYASGDVFV 396
           +A    IG    D  Y EE         LE         FTG    + + +     DV V
Sbjct: 324 DAEGWVIGPTDEDPEYAEECRELVESLGLEDNVK-----FTGF---QNVKEYLPKLDVLV 375

Query: 397 MPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII---PEDQDGKIGYLFNPGDLDDCLSK 453
           + S SE   LV+LEAM++GIPVV    G   ++I    ++  G  G +  P D +     
Sbjct: 376 LTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435

Query: 454 LEPLLYNQELRETMGQAARQEMEKYD 479
           +  LL + ELR  MG+A R+ +E+Y 
Sbjct: 436 ILRLLKDPELRRAMGEAGRKRVERYY 461

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475

>gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family

 Score =  103 bits (260), Expect = 4e-24
 Identities = 101/388 (26%), Positives = 157/388 (40%), Gaps = 51/388 (13%)

Query: 134 SGYKNRFQNFIKYLREMGDEVMVVTT--HEGVPQE--------FYGAKLIGSRSFPCPWY 183
           SGY  R +  ++  R +G E   +T   H              FY  +         P  
Sbjct: 14  SGYTFRTRAILRAQRALGWETRHLTGPKHGAAGALEEEVDGLHFY--RTPPPAGARLPLL 71

Query: 184 QKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV----------- 232
           +++ +  AL+ R+      ++PDI+HA SP +    AL + + L +P+V           
Sbjct: 72  RELAVMQALARRLEEVAREWRPDILHAHSPALNGLAALRVGRRLGIPVVYEIRAFWEDAA 131

Query: 233 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIR 292
           + + T       RY  +  ++   L      R AD        +  DL  AR   A KI 
Sbjct: 132 VDHGTTRE-GSLRYRLTRALETYAL------RRADAVTTICEGLRGDL-VARGIPAEKIT 183

Query: 293 IWKKGVDSESFH-PRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--- 348
           +    VD + F  P  R   +   L  G    P+I  +G     + LD L   + RL   
Sbjct: 184 VIPNAVDLDLFGLPAPRDPALAAEL--GLEGAPVIGFIGSFYAYEGLDLLVAALPRLLRR 241

Query: 349 -PEARIAFIGDGPYREELEKMFTGMPA----VFTGMLLGEELSQAYASGDVFVMPSESET 403
            P+AR+  +G GP  E L      +      VFTG +  +E+ + Y+  DV   P     
Sbjct: 242 HPDARLLLVGGGPQEEALRAQAAALGLADRVVFTGRVPHDEVERYYSLIDVLAYPRLPMR 301

Query: 404 LGLVV-----LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL 458
           L  +V     LEAM+ G  V     GG  ++I   +DG+ G LF  GD     + L  LL
Sbjct: 302 LTELVTPLKPLEAMAQGRLVAASDVGGHRELI---RDGETGVLFPAGDPAALAAALLALL 358

Query: 459 YNQELRETMGQAARQEME-KYDWRAATR 485
            N+     +  AAR+ +E + +W A+  
Sbjct: 359 DNRAQWPELRAAARRFVETERNWAASVA 386

PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397

>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 98.8 bits (246), Expect = 1e-23
 Identities = 57/152 (37%), Positives = 74/152 (48%), Gaps = 14/152 (9%)

Query: 302 SFHPRFRSSEMRWRLSNGEPD--KPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAF 355
           + H   RS      LS           V VGRL  EK LD L      + +R P+ ++  
Sbjct: 81  TVHGVNRSLLEGVPLSLLALSIGLADKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVI 140

Query: 356 IGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASG-DVFVMPSESETLGLVVLE 410
            GDGP RE LE++          +F G L  EEL     +  DVFV+PS  E  GLVVLE
Sbjct: 141 AGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLE 200

Query: 411 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLF 442
           AM+ G+PV+    GG P+I+   +DG  G L 
Sbjct: 201 AMACGLPVIATDVGGPPEIV---EDGLTGLLV 229

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229

>gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

 Score =  100 bits (251), Expect = 4e-23
 Identities = 83/322 (25%), Positives = 141/322 (43%), Gaps = 55/322 (17%)

Query: 185 KVPLSLALS-PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC-----VPIVMSYHT- 237
           K PLS  L+  ++   + +FKPD++HA      +F A I A+LL       P++ + H+ 
Sbjct: 59  KNPLSFLLALWKLRKILRQFKPDVVHAH-----MFHANIFARLLRLFLPSPPLICTAHSK 113

Query: 238 ----HVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRI 293
                + +   R T                  +DLT   S        A++   ANK  +
Sbjct: 114 NEGGRLRMLAYRLT---------------DFLSDLTTNVSKEALDYFIASKAFNANKSFV 158

Query: 294 WKKGVDSESFHPRFRSSEMRWRLSNG---EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE 350
              G+D++ F         R ++ N    + D  +I+ VGRL   K    L +   +L  
Sbjct: 159 VYNGIDTDRFRK---DPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLS 215

Query: 351 A----RIAFIGDGPYREELEKMFTG---MPAVFTGMLLG--EELSQAYASGDVFVMPSES 401
                ++   GDGP R  LE++         V    LLG  ++++  Y + D+FV+ S  
Sbjct: 216 DYLDIKLLIAGDGPLRATLERLIKALGLSNRVK---LLGLRDDIAAYYNAADLFVLSSAW 272

Query: 402 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL-EPLLYN 460
           E  GLVV EAM+  +PVV   AGG+ +++     G  G +    D +   +K+ E L  +
Sbjct: 273 EGFGLVVAEAMACELPVVATDAGGVREVV-----GDSGLIVPISDPEALANKIDEILKMS 327

Query: 461 QELRETMGQAARQEMEKYDWRA 482
            E R+ +G    + ++K+   +
Sbjct: 328 GEERDIIGARRERIVKKFSINS 349

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360

>gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 99.2 bits (248), Expect = 1e-22
 Identities = 93/371 (25%), Positives = 137/371 (36%), Gaps = 77/371 (20%)

Query: 145 KYLREMGDEVMVVTTHEG---VPQEFYGAKLIGSRSFPCPWYQKVPL-SLALSPRIISEV 200
           + L E G   +V +   G   V +     +  GSR    P+  K PL  L    R+   +
Sbjct: 21  RALVERGHRSLVAS--AGGRLVAE----LEAEGSRHIKLPFISKNPLRILLNVARLRRLI 74

Query: 201 ARFKPDIIHASS--PGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLV 258
              K DI+HA S  P    + A   A+    P V + H         Y+ ++        
Sbjct: 75  REEKVDIVHARSRAPAWSAYLA---ARRTRPPFVTTVHG-------FYSVNFRYN----- 119

Query: 259 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE---MRWR 315
              + R  D  +  S  I   +        ++IR+  +GVD + F P     E      R
Sbjct: 120 -AIMARG-DRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAR 177

Query: 316 LSNGEPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIGDGP----YREELEK 367
                  KP+I+  GRL    G E  ++ L R+    P+  +  +GD      Y  EL +
Sbjct: 178 EWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLE 237

Query: 368 M-----------FTG----MPAVFTGMLLGEELSQAYASGDVFVMPS-ESETLGLVVLEA 411
           +           F G    MPA             AYA  D+ V  S E E  G   +EA
Sbjct: 238 LIKRLGLQDRVTFVGHCSDMPA-------------AYALADIVVSASTEPEAFGRTAVEA 284

Query: 412 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD---LDDCLSKLEPLLYNQELRETMG 468
            + G PV+    GG  + +   + G+ G L  PGD   L   L ++  LL     R  M 
Sbjct: 285 QAMGRPVIASDHGGARETV---RPGETGLLVPPGDAEALAQALDQILSLLPEG--RAKMF 339

Query: 469 QAARQEMEKYD 479
             AR  +E   
Sbjct: 340 AKARMCVETLF 350

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355

>gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family

 Score = 97.6 bits (243), Expect = 5e-22
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 25/244 (10%)

Query: 265 AADLTLVPSVAIGKD-LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDK 323
           AAD  +  S  + +D L+        K+ +   G+D++ + P    + +  R    +  +
Sbjct: 144 AADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPD-DGNVVLDRY-GIDRSR 201

Query: 324 PLIVHVGRLGVEKSLDFLKRVMDRLP-EARIAFIGDGP----YREELEKMFTGMPAVFTG 378
           P I+ VGR+  +K +  L   +  +P + ++      P      EE+ +    +    TG
Sbjct: 202 PYILFVGRITRQKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTG 261

Query: 379 ------MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPE 432
                 ML  EEL +  ++ +VFV PS  E LG+V LEAM+ G PVV    GGIP+++  
Sbjct: 262 IIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVV-- 319

Query: 433 DQDGKIGYLFNPGDLDDC-----LSK-LEPLLYNQELRETMGQAARQE-MEKYDWRA-AT 484
             DG+ G+L  P + D       L+K +  LL + EL + MG A R+   E++ W + A 
Sbjct: 320 -VDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIAK 378

Query: 485 RTIR 488
           +T+ 
Sbjct: 379 KTVE 382

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388

>gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 89.9 bits (224), Expect = 3e-19
 Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 22/182 (12%)

Query: 320 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI----GDGPYRE---ELEKMFTGM 372
           +PD PL   VGRL  +K +D L   +  L E     +    GD  Y E   EL   + G 
Sbjct: 293 DPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGR 352

Query: 373 PAVFTGMLLGEELS-QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GGIPD-I 429
            AV  G    E L+   YA  D F+MPS  E  GL  + AM  G   + VRA GG+ D +
Sbjct: 353 VAVLIGY--DEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPI-VRATGGLADTV 409

Query: 430 IPEDQDGKI--GYLF---NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRAA 483
           I  ++D     G++F   N   L   L +   L  + E    + + A   M + + W  +
Sbjct: 410 IDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNA---MAQDFSWDRS 466

Query: 484 TR 485
            +
Sbjct: 467 AK 468

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476

>gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase

 Score = 84.0 bits (208), Expect = 2e-17
 Identities = 70/225 (31%), Positives = 100/225 (44%), Gaps = 23/225 (10%)

Query: 289 NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR----V 344
           ++I +   G D E F P  R++E R RL     D  ++  VGR+   K+ D L R    +
Sbjct: 187 DRIDVVAPGADLERFRPGDRATE-RARLGL-PLDTKVVAFVGRIQPLKAPDVLLRAVAEL 244

Query: 345 MDRLPEA--RIAFIGDGP----------YREELEKMFTGMPAVFTGMLLGEELSQAYASG 392
           +DR P+   R+  +G GP            E   ++       F      EEL   Y + 
Sbjct: 245 LDRDPDRNLRVIVVG-GPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA 303

Query: 393 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLS 452
           DV  +PS +E+ GLV +EA + G PVV  R GG+P  +    DG+ G L +  D  D   
Sbjct: 304 DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAV---ADGETGLLVDGHDPADWAD 360

Query: 453 KLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW 497
            L  LL +   R  MG AA +    + W AAT       Y  A+ 
Sbjct: 361 ALARLLDDPRTRIRMGAAAVEHAAGFSW-AATADGLLSSYRDALA 404

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405

>gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

 Score = 81.9 bits (203), Expect = 7e-17
 Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 12/161 (7%)

Query: 326 IVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREELEKMFT--GMPAVFTGM 379
           I+ V RL  EK LD L     +V+ ++P+A +   G G   E+L+++    G+       
Sbjct: 207 IITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLK 266

Query: 380 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG--VRAGGIPDIIPEDQDGK 437
               +L + Y    + ++ S+SE  GL ++EA+S G+PV+   V  G   +II   +DG+
Sbjct: 267 GYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGP-SEII---EDGE 322

Query: 438 IGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKY 478
            GYL   GD++     +  LL + +L +   +AA +  E+Y
Sbjct: 323 NGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372

>gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system

 Score = 81.6 bits (202), Expect = 1e-16
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 15/184 (8%)

Query: 308 RSSEMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYR 362
                + R   G   D+ +I+ VGRL   K +D+L    K V+ + P  R+  +GDG Y 
Sbjct: 211 EVERKKLRKKLGFSEDEKIILFVGRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGDYS 270

Query: 363 EEL---EKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV 419
             L   +K++      FTG L  E+L + Y   DV V+PS  E    V +E M  G+P++
Sbjct: 271 RYLQECKKIW--SKITFTGKLDKEKLYELYQIADVGVLPSFHEQCSYVAIEMMMHGLPLI 328

Query: 420 GVRAGGIPDIIPEDQDG---KIGYLFNPGDLDDCL--SKLEPLLYNQELRETMGQAARQE 474
           G  + G+ ++I +  +G    I    +  +LD      KL  LL + +  + MG+ AR+ 
Sbjct: 329 GTTSTGLSEMIEDGLNGYKIPIKEYRDYVELDKKELVQKLLKLLSSSDEAKQMGKNARRR 388

Query: 475 MEKY 478
             + 
Sbjct: 389 YLEK 392

Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406

>gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain

 Score = 76.7 bits (189), Expect = 1e-16
 Identities = 37/156 (23%), Positives = 57/156 (36%), Gaps = 5/156 (3%)

Query: 134 SGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALS 193
            G +       + L   G EV VVT      +       +     P P    +P  L   
Sbjct: 1   GGAERYVLELARALAARGHEVTVVTPRGPPGRPELEEDGVRVHRLPVPRRPSLPGDLRAL 60

Query: 194 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVK 253
            R+   + R +PD++HA  P   +   L  A+   VP+V++ H        R       +
Sbjct: 61  RRLRRLLRRERPDVVHAHGPLAGLLARL-AARRRGVPVVVTPHGLA----LRQGSGLKRR 115

Query: 254 PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAAN 289
               + + L R AD  +  S A  + L A  V AA 
Sbjct: 116 LARALERRLLRRADAVVAVSEAEAELLRALGVPAAR 151

Length = 158

>gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 80.3 bits (199), Expect = 2e-16
 Identities = 70/245 (28%), Positives = 104/245 (42%), Gaps = 37/245 (15%)

Query: 204 KPDIIHA-SSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFL 262
           K DI+H   S        L+ AK   V + +  H+H             +    ++ K +
Sbjct: 80  KYDIVHVHGSSASGFI--LLAAKKAGVKVRI-AHSHNTSDSH--DKKKKILKYKVLRKLI 134

Query: 263 HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS--EMRWRLSNGE 320
           +R A   L  S   GK L         K ++   G+D E F   F     + R  L   E
Sbjct: 135 NRLATDYLACSEEAGKWLFGKVKN--KKFKVIPNGIDLEKF--IFNEEIRKKRRELGILE 190

Query: 321 PDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGM---P 373
            DK +I HVGR   +K+ +FL  +   L    P A++  +GDG   EE++K    +    
Sbjct: 191 -DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLED 249

Query: 374 AVFTGMLLGE-----ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD 428
            V     LG      EL QA    DVF+ PS  E L LV++EA +SG+P +      + D
Sbjct: 250 KVI---FLGVRNDVPELLQAM---DVFLFPSLYEGLPLVLIEAQASGLPCI------LSD 297

Query: 429 IIPED 433
            I ++
Sbjct: 298 TITKE 302

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358

>gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 80.5 bits (199), Expect = 3e-16
 Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 21/178 (11%)

Query: 317 SNGEPDKPL-------IVHVGRLGVEKSLDFLKRVMDRLPEARIAF--IGDGPYREELEK 367
           S    D  L       +V V R  V+  +  L  +    P  +I +  IG GP  + L++
Sbjct: 223 SKPSKDDTLRIVSCSYLVPVKR--VDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKE 280

Query: 368 MFTGMP----AVFTGMLLGEELSQAYA--SGDVFVMPSESETLGLVVLEAMSSGIPVVGV 421
           +    P      FTG L   E+ + Y     DVFV  SESE L + ++EAMS GIPV+  
Sbjct: 281 LAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIAT 340

Query: 422 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCL-SKLEPLLYNQELRETMGQAARQEMEKY 478
             GG P+I+    +G  G L +     + L S L   + N+E  +TM + AR++ E+ 
Sbjct: 341 NVGGTPEIV---DNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEEN 395

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407

>gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family

 Score = 79.4 bits (196), Expect = 5e-16
 Identities = 69/245 (28%), Positives = 96/245 (39%), Gaps = 39/245 (15%)

Query: 264 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEM----RWRLSNG 319
             AD  L  S A   +L A     A  +     GVD+  F P   +++     R  L  G
Sbjct: 137 VEADAVLCVSAAWAAELRAEWGIDATVV---PNGVDAARFSPAADAADAALRRRLGLRGG 193

Query: 320 EPDKPLIVHVGRLGVEK---SLDFLK---RVMDRLPEARIAFIGD------GPYREELEK 367
               P ++ VG  G+E    ++D L+    +  R P+A++   G         YR E E 
Sbjct: 194 ----PYVLAVG--GIEPRKNTIDLLEAFALLRARRPQAQLVIAGGATLFDYDAYRREFEA 247

Query: 368 MFTGM-----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR 422
               +       V TG +   +L   Y   D F  PS  E  GLVVLEA++SGIPVV   
Sbjct: 248 RAAELGLDPGAVVITGPVPDADLPALYRCADAFAFPSLKEGFGLVVLEALASGIPVV--- 304

Query: 423 AGGIPDIIP--EDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW 480
                DI P  E          +P D D     L   L +   R  +  A  +   +Y W
Sbjct: 305 ---ASDIAPFTEYLGRFDAAWADPSDPDSIADALALAL-DPARRPALLAAGPELAARYTW 360

Query: 481 RAATR 485
            A+ R
Sbjct: 361 DASAR 365

A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373

>gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism]

 Score = 79.2 bits (196), Expect = 1e-15
 Identities = 45/152 (29%), Positives = 61/152 (40%), Gaps = 16/152 (10%)

Query: 313 RWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFT 370
           R  L    P  PL   V RL  +K LD L   +D L E   ++  +G G    ELE+   
Sbjct: 285 RLGLDVDLP-GPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTG--DPELEEALR 341

Query: 371 GMPA-----VFTGMLLGEELSQA-YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG 424
            + +     V   +   E L+   YA  DV +MPS  E  GL  L AM  G   +    G
Sbjct: 342 ALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETG 401

Query: 425 GIPDII----PEDQDGKI-GYLFNPGDLDDCL 451
           G+ D +         G   G+LF   + D   
Sbjct: 402 GLADTVVDRNEWLIQGVGTGFLFLQTNPDHLA 433

Length = 487

>gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type

 Score = 78.1 bits (193), Expect = 2e-15
 Identities = 56/194 (28%), Positives = 83/194 (42%), Gaps = 30/194 (15%)

Query: 320 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGM----P 373
           + D PL   + RL  +K +D L   +  L E   ++  +G G    ELE+    +    P
Sbjct: 288 DDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGD--PELEEALRELAERYP 345

Query: 374 AVFTGML-LGEELSQ-AYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDII 430
                ++   E L+   YA  D  +MPS  E  GL  L AM  G +P+V  R GG+ D +
Sbjct: 346 GNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVR-RTGGLADTV 404

Query: 431 ----PEDQDGKIGYLFNPGDLDDCLSKLEP--LLYNQ--ELRETMGQAARQEMEK-YDWR 481
               PE + G  G+LF   D    L+ L     LY Q   L E + + A   M + + W 
Sbjct: 405 VDGDPEAESGT-GFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNA---MSQDFSWD 460

Query: 482 AATRTIRNEQYNAA 495
            +      +QY   
Sbjct: 461 KSA-----KQYVEL 469

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473

>gnl|CDD|100001 cd04955, GT1_like_6, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 73.0 bits (180), Expect = 7e-14
 Identities = 84/370 (22%), Positives = 130/370 (35%), Gaps = 70/370 (18%)

Query: 141 QNFIKYLREMGDEVMVVTTHEGVPQ---EFYGAKLIGSRSFPCPWYQKVPLSLALSPRII 197
           +     L   G EV V        Q   E+ G +LI         +   P    L   I 
Sbjct: 22  EELAPRLVARGHEVTVYCRSPYPKQKETEYNGVRLI---------HIPAPEIGGLGTIIY 72

Query: 198 SEVA-------RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSW 250
             +A       +   D +HA  P I  F  L + +L    +V+  +     +  R  +  
Sbjct: 73  DILAILHALFVKRDIDHVHALGPAIAPF--LPLLRLKGKKVVV--NMDGLEW-KRAKWGR 127

Query: 251 LVKPM-----WLVIKFLHRAADLTLVPSVAIGKDLEAAR----VTAANKIRIWKKGVDSE 301
             K        L +KF    AD  +  S  I + L+                   G D  
Sbjct: 128 PAKRYLKFGEKLAVKF----ADRLIADSPGIKEYLKEKYGRDSTYIPY-------GADH- 175

Query: 302 SFHPRFRSSEMRWRLS--NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEAR-IAFIGD 358
                  SSE    L     EP +  ++ VGR+  E ++D L     +    + +  +G+
Sbjct: 176 -----VVSSEEDEILKKYGLEPGRYYLL-VGRIVPENNIDDLIEAFSKSNSGKKLVIVGN 229

Query: 359 ----GPYREELEKMFTGMPAV-FTGMLLGEELSQAYASGDVFVMPSES-ETLGLVVLEAM 412
                PY + L++     P + F G +  +EL +      +F +   S       +LEAM
Sbjct: 230 ADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAM 289

Query: 413 SSGIPVVGVRAGGIPDIIPEDQ-DGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAA 471
           + G PV+        D     +  G     F  G  DD  S LE L  + E    M +AA
Sbjct: 290 AYGCPVLAS------DNPFNREVLGDKAIYFKVG--DDLASLLEELEADPEEVSAMAKAA 341

Query: 472 RQEM-EKYDW 480
           R+ + EKY W
Sbjct: 342 RERIREKYTW 351

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea. Length = 363

>gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

 Score = 70.3 bits (173), Expect = 4e-13
 Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)

Query: 321 PDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP----YREELEKM 368
           P++P I  V R          +D  ++V +R+P+ ++  +G    D P      EE+ + 
Sbjct: 188 PERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEY 247

Query: 369 FTGMPAVFTGMLLGE---ELS--QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 423
             G P +    L      E++  Q  +   V +  S  E  GL V EA+  G PV+    
Sbjct: 248 AEGDPDIHVLTLPPVSDLEVNALQRAS--TVVLQKSIREGFGLTVTEALWKGKPVIAGPV 305

Query: 424 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE-MEKYDWRA 482
           GGIP  I   +DG+ G+L +    ++   ++  LL + ELR  MG  AR+   E +    
Sbjct: 306 GGIPLQI---EDGETGFLVDTV--EEAAVRILYLLRDPELRRKMGANAREHVRENFL--- 357

Query: 483 ATRTIRNEQYNAA 495
            TR +++  Y  +
Sbjct: 358 ITRHLKDYLYLIS 370

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372

>gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 66.4 bits (163), Expect = 8e-12
 Identities = 65/215 (30%), Positives = 93/215 (43%), Gaps = 38/215 (17%)

Query: 282 AARVT--AAN----KIRIWKK-GVDSESFHP-----RFRSSEMR---WRLSNGEPDKPLI 326
           AARV    AN      RI K  G D+   +P     RF  +E +   + LS         
Sbjct: 151 AARVDYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAEEKEDYY-LS--------- 200

Query: 327 VHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELS 386
             VGRL   K +D      ++L + R+  IGDGP  + L     G    F G +  EEL 
Sbjct: 201 --VGRLVPYKRIDLAIEAFNKLGK-RLVVIGDGPELDRLRAK-AGPNVTFLGRVSDEELR 256

Query: 387 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD 446
             YA    F+ P+E E  G+V +EAM+SG PV+    GG  + +    DG  G LF    
Sbjct: 257 DLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETV---IDGVTGILFEE-Q 311

Query: 447 LDDCLSK-LEPLLYNQELRETMGQAARQEMEKYDW 480
             + L+  +E     ++  +   QA R   E++  
Sbjct: 312 TVESLAAAVERF---EKNEDFDPQAIRAHAERFSE 343

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351

>gnl|CDD|185325 PRK15427, PRK15427, colanic acid biosynthesis glycosyltransferase WcaL; Provisional

 Score = 66.3 bits (162), Expect = 1e-11
 Identities = 67/242 (27%), Positives = 102/242 (42%), Gaps = 52/242 (21%)

Query: 262 LHRAADLTLVPSVAIGKDLEAARVTA----ANKIRIWKKGVDSESFHPRFRSSEMRWRLS 317
           L R  DL L  S     DL A R+        KI + + GVD   F PR   +       
Sbjct: 171 LFRRGDLMLPIS-----DLWAGRLQKMGCPPEKIAVSRMGVDMTRFSPRPVKA------- 218

Query: 318 NGEPDKPL-IVHVGRLGVEKSLDFLKRVMDRLPEARIAF----IGDGPY---------RE 363
              P  PL I+ V RL  +K L        +L E  +AF    +G GP+         + 
Sbjct: 219 ---PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQY 275

Query: 364 ELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS------ESETLGLVVLEAMSSGIP 417
           +LE +   MP    G     E+       DVF++PS      + E + + ++EAM+ GIP
Sbjct: 276 QLEDVVE-MP----GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIP 330

Query: 418 VVGVRAGGIPDIIPEDQDGKIGYLFNPGD---LDDCLSKLEPLLYNQELRETMGQAARQE 474
           VV     GIP+++   +  K G+L    D   L   L+    L  + +    + + AR++
Sbjct: 331 VVSTLHSGIPELV---EADKSGWLVPENDAQALAQRLAAFSQL--DTDELAPVVKRAREK 385

Query: 475 ME 476
           +E
Sbjct: 386 VE 387

Length = 406

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 64.9 bits (159), Expect = 2e-11
 Identities = 61/308 (19%), Positives = 104/308 (33%), Gaps = 55/308 (17%)

Query: 147 LREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEV--ARFK 204
           L   G EV +  + +        A L+     P                 ++E   A   
Sbjct: 32  LVARGHEVTLFASGDSKTA----APLVPVVPEPLRLDAPGRDRAEAEALALAERALAAGD 87

Query: 205 PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHR 264
            DI+H  S        L  A+ L VP+V + H      + +                 + 
Sbjct: 88  FDIVHNHSL----HLPLPFARPLPVPVVTTLHGPPDPELLKL----------------YY 127

Query: 265 AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKP 324
           AA    VP V+I              +     G+D + +  R            G     
Sbjct: 128 AARPD-VPFVSISDAQ-RRPWPPLPWVATVHNGIDLDDYPFR------------GPKGDY 173

Query: 325 LIVHVGRL----GVEKSLDFLKRVMDRLPEARIA-FIGDGPYREELEKMF--TGMPAVFT 377
           L + +GR+    G   ++   +R    L   ++A  + D  Y           G    + 
Sbjct: 174 L-LFLGRISPEKGPHLAIRAARRAGIPL---KLAGPVSDPDYFYREIAPELLDGPDIEYL 229

Query: 378 GMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG 436
           G + G E ++   +    + P    E  GLV++EAM+ G PV+  R G +P+++    DG
Sbjct: 230 GEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVE---DG 286

Query: 437 KIGYLFNP 444
             G+L + 
Sbjct: 287 VTGFLVDS 294

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

>gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional

 Score = 64.8 bits (159), Expect = 5e-11
 Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 30/184 (16%)

Query: 320 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI----GDGPYREELEKMFTGMPAV 375
           + D PL   V RL  +K LD +   +  L E     +    GD     ELE+ F  + A 
Sbjct: 279 DDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDP----ELEEAFRALAAR 334

Query: 376 FTG---MLLG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GGIP 427
           + G   + +G  E L+ + YA  D+F+MPS  E  GL  L A+  G +P+  VR  GG+ 
Sbjct: 335 YPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPI--VRRTGGLA 392

Query: 428 D-IIPEDQDGKI--GYLF---NPGDLDDCLSKLEPLLYNQ--ELRETMGQAARQEMEKYD 479
           D +I  + +     G++F   N  DL   L +    LY Q    R    QA  Q+   + 
Sbjct: 393 DTVIDYNPEDGEATGFVFDDFNAEDLLRALRRAL-ELYRQPPLWRALQRQAMAQD---FS 448

Query: 480 WRAA 483
           W  +
Sbjct: 449 WDKS 452

Length = 466

>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 14/120 (11%)

Query: 322 DKPLIVHVGRLGVEKSLDFL-----KRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVF 376
               I   G       L +L       +   LP+  +  IG GP  EEL ++   +   F
Sbjct: 1   GIVFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGP--EELARLAPNV--HF 56

Query: 377 TGMLLGEELSQAYASGDVFVMPSES-ETLGLVVLEAMSSGIPVVG--VRAGGIPDIIPED 433
            G +  E+L+   AS DV + P        L +LEA+++G+PVV   + A G+P+ +   
Sbjct: 57  LGFV--EDLAALLASADVALAPLRFGAGSPLKLLEALAAGLPVVATDIGAEGLPEDLGWG 114

Length = 134

>gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

 Score = 61.7 bits (150), Expect = 3e-10
 Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 27/246 (10%)

Query: 270 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHV 329
           +VPS  + K     R+  A+ I I   G   E++    + + +R +L N  PD+ ++++ 
Sbjct: 144 IVPSQFL-KKFYEERLPNAD-ISIVPNGFCLETYQSNPQPN-LRQQL-NISPDETVLLYA 199

Query: 330 GRLGVEKSLDFLKRVMDRLPEAR----IAFIGD---------GPYREELEKMFT--GMPA 374
           GR+  +K +  L +  ++L  A     +  +GD           Y++++ +     G   
Sbjct: 200 GRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRC 259

Query: 375 VFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED 433
           +  G    E++   Y   D+ V+PS+  E   +V +EAM++G PV+    GGI + +   
Sbjct: 260 IMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFV--- 316

Query: 434 QDGKIGY-LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY 492
            +G  GY L  P   D  +S +   L + EL +   QA      KY W   T+    + +
Sbjct: 317 LEGITGYHLAEPMTSDSIISDINRTLADPELTQIAEQAKDFVFSKYSWEGVTQRFEEQIH 376

Query: 493 NAAIWF 498
           N   WF
Sbjct: 377 N---WF 379

Length = 380

>gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain

 Score = 61.7 bits (150), Expect = 4e-10
 Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 41/220 (18%)

Query: 297 GVDSESFHPRFRSSEMRWRLSNG------EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE 350
           GVD   F+P   S E    + N       +P+KP I+ + R    K++  L     R P+
Sbjct: 217 GVDLSRFYPPQSSEETS-EIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPK 275

Query: 351 AR-----IAFIGDGPYREELEKMFTGMPAVFTGMLL------------------GEELSQ 387
            +     +  +G    R+++ KM +    V   +LL                   +++ +
Sbjct: 276 LQEMANLVLVLGC---RDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPE 332

Query: 388 AY----ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN 443
            Y     S  +FV P+ +E  GL +LEA + G+P+V    GG  DII   ++   G L +
Sbjct: 333 LYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRN---GLLVD 389

Query: 444 PGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRA 482
             DL+   S LE  L +    +   +   + + + Y W A
Sbjct: 390 VLDLEAIASALEDALSDSSQWQLWSRNGIEGVRRHYSWDA 429

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439

>gnl|CDD|99988 cd03818, GT1_ExpC_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 61.1 bits (149), Expect = 4e-10
 Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 45/245 (18%)

Query: 265 AADLTLVPSVAIGKDL--EAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG--- 319
            AD  + P+    +       R    ++I +   G+D++   P     + R RL NG   
Sbjct: 156 QADAGVSPT-RWQRSTFPAELR----SRISVIHDGIDTDRLRP---DPQARLRLPNGRVL 207

Query: 320 EPDKPLIVHVGRLGVEKSLDF------LKRVMDRLPEARIAFIGD------------GPY 361
            P   +I  V R  +E    F      L R++   P+AR+  +G               +
Sbjct: 208 TPGDEVITFVAR-NLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESW 266

Query: 362 REELEKMFTGMPAV----FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP 417
           ++ +     G   +    F G +  ++        DV V  +    L   +LEAM+ G  
Sbjct: 267 KQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCL 326

Query: 418 VVGVRAGGIPDIIPEDQDGKIGYL---FNPGDLDDCLSKLEPLLYNQELRETMGQAARQE 474
           VVG     + ++I    DG+ G L   F+P  L   + +   LL +   R  + +AAR+ 
Sbjct: 327 VVGSDTAPVREVI---TDGENGLLVDFFDPDALAAAVIE---LLDDPARRARLRRAARRT 380

Query: 475 MEKYD 479
             +YD
Sbjct: 381 ALRYD 385

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). Length = 396

>gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1

 Score = 56.0 bits (136), Expect = 5e-10
 Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 8/94 (8%)

Query: 394 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 453
           + + PS  ++  + V EA + G P++  R  G+ ++    ++  + Y     D ++   K
Sbjct: 1   IVLNPSRRDSPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEI-VLY----RDPEELAEK 55

Query: 454 LEPLLYNQELRETMGQAARQEMEK---YDWRAAT 484
           L  LL + E R  +  A R+ +     Y+ RA  
Sbjct: 56  LRYLLADPEERRAIAAAGRERVLAEHTYEHRAEQ 89

Length = 92

>gnl|CDD|188520 TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL

 Score = 58.8 bits (142), Expect = 3e-09
 Identities = 67/240 (27%), Positives = 97/240 (40%), Gaps = 48/240 (20%)

Query: 262 LHRAADLTLVPSVAIGKDLEAARVTA----ANKIRIWKKGVDSESFHPRFRSSEMRWRLS 317
           L R  DL L  S     DL A R+ A      KI + + GVD   F  R           
Sbjct: 171 LFRRGDLMLPIS-----DLWAGRLKAMGCPPEKIAVSRMGVDMTRFTHR----------P 215

Query: 318 NGEPDKPL-IVHVGRLGVEKSLDFLKRVMDRLPEARIAF----IGDGPYREELEKM---- 368
              P  PL I+ V RL  +K L        +L    +AF    +G GP+   L  +    
Sbjct: 216 VKAPGTPLEIISVARLTEKKGLHVAIEACRQLKAQGVAFRYRILGIGPWERRLRTLIEQY 275

Query: 369 ----FTGMPAVFTGMLLGEELSQAYASGDVFVMPS------ESETLGLVVLEAMSSGIPV 418
                  MP    G     E+       DVF++PS      + E + + ++EAM+ GIPV
Sbjct: 276 QLEDVVEMP----GFKPSHEVKAMLDDADVFLLPSVTGTDGDMEGIPVALMEAMAVGIPV 331

Query: 419 VGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL--LYNQELRETMGQAARQEME 476
           V     GIP+++   + GK G+L    D      +L     +  Q LR  +   AR+++E
Sbjct: 332 VSTVHSGIPELV---EAGKSGWLVPENDAHALADRLAAFSRIDTQTLRPVL-TRAREKVE 387

This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. Length = 406

>gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 58.0 bits (141), Expect = 4e-09
 Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 17/144 (11%)

Query: 298 VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARI 353
           VDS  F P           S  + DK  IV + RL   K +D L  ++  +    P  R 
Sbjct: 177 VDSSDFTPD---------PSKRDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRF 227

Query: 354 AFIGDGPYREELEKM---FTGMPAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVL 409
              GDGP R  LE+M   +     V   G +  E +      G +F+  S +E   + ++
Sbjct: 228 IIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIV 287

Query: 410 EAMSSGIPVVGVRAGGIPDIIPED 433
           EA S G+ VV  R GGIP+++P D
Sbjct: 288 EAASCGLLVVSTRVGGIPEVLPPD 311

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398

>gnl|CDD|222130 pfam13439, Glyco_transf_4, Glycosyltransferase Family 4

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 13/164 (7%)

Query: 142 NFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVA 201
              + L   G EV VV     + +       +   S P   +++   S A    +   + 
Sbjct: 20  ELARALARRGHEVTVVA--PELGRPLEEELGVILVSVPGLSFKRALRSPAFVFALRRLLK 77

Query: 202 RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVI-K 260
           + + D++H+  P               VP V++ H   P+    Y+     + + L + +
Sbjct: 78  KERFDLVHSHHP--------AALLFADVPAVLTVHGTWPLRFI-YSSLSPYEVLELPLER 128

Query: 261 FLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFH 304
            L R AD  +  S  +  +L    V    KIR+   GVD+E F 
Sbjct: 129 RLFRRADAVIAVSEEVADELARYGVPEE-KIRVIPNGVDTERFR 171

Length = 171

>gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 55.0 bits (133), Expect = 4e-08
 Identities = 77/367 (20%), Positives = 128/367 (34%), Gaps = 54/367 (14%)

Query: 147 LREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPD 206
           L   G +V+VV+     P   YG +    R          PL    + R I       PD
Sbjct: 26  LSARGPDVLVVSVAALYPSLLYGGEQEVVRVIV----LDNPLDYRRAARAIR---LSGPD 78

Query: 207 IIHASSP-GIMVFGALIIAKLLC----VPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKF 261
           ++      GI    A +   LL     +P+V++ HT     +              +++ 
Sbjct: 79  VVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHT----VLLHEPRPGD----RALLRL 130

Query: 262 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHP---RFRSSEMRWRLSN 318
           L R AD  +V S  + + L           +I          H             +   
Sbjct: 131 LLRRADAVIVMSSELLRALLLRAYPE----KIAV------IPHGVPDPPAEPPESLKALG 180

Query: 319 GEPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARI----AFIGDGPYREELEKMFT 370
           G   +P+++  G L    G+E  L+ L  ++ + P+ R+        D            
Sbjct: 181 GLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALA 240

Query: 371 GMPAV-----F-TGMLLGEELSQAYASGDVFVMP--SESETLGLVVLEAMSSGIPVVGVR 422
               +     F    L  EEL + +++ DV V+P  S  +T   V+  A+  G PV+   
Sbjct: 241 ERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTP 300

Query: 423 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW-R 481
            G   + + +      G L  PGD       +  LL + EL + +   AR+      W R
Sbjct: 301 VGH-AEEVLDGGT---GLLVPPGDPAALAEAIRRLLADPELAQALRARAREYARAMSWER 356

Query: 482 AATRTIR 488
            A R +R
Sbjct: 357 VAERYLR 363

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366

>gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase

 Score = 52.8 bits (127), Expect = 3e-07
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 394 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 453
           +FV P+  E  GL VLEAM+ G+P    R GG  +II   QDG  G+  +P   ++   K
Sbjct: 646 IFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEII---QDGVSGFHIDPYHGEEAAEK 702

Query: 454 L----EPLLYNQELRETMGQAARQEM-EKYDWR 481
           +    E    +    + + Q   Q + EKY W+
Sbjct: 703 IVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWK 735

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784

>gnl|CDD|182148 PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase; Provisional

 Score = 48.6 bits (116), Expect = 4e-06
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)

Query: 383 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKIGYL 441
           E + Q   +    ++ S+ E   + +LEAMS GIP +      G  DII   + G  G L
Sbjct: 249 EVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDII---KPGLNGEL 305

Query: 442 FNPGDLDDCLSKL 454
           + PG++D+ + KL
Sbjct: 306 YTPGNIDEFVGKL 318

Length = 359

>gnl|CDD|131964 TIGR02918, TIGR02918, accessory Sec system glycosylation protein GtfA

 Score = 47.4 bits (113), Expect = 1e-05
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 15/140 (10%)

Query: 326 IVHVGRLGVEKSLDFL-KRVM---DRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLL 381
           I+   RL  EK +D+L K V+     +PE      G+G  +++L+K+     A     L 
Sbjct: 322 IITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLK 381

Query: 382 GE-ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG--VRAGGIPDIIPEDQDGKI 438
           G   LS+ Y   ++++  S SE  GL ++EA+ SG+ ++G  V  G  P  I   +D K 
Sbjct: 382 GHRNLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGN-PTFI---EDNKN 437

Query: 439 GYL----FNPGDLDDCLSKL 454
           GYL        D D  ++ L
Sbjct: 438 GYLIPIDEEEDDEDQIITAL 457

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system [Protein fate, Protein modification and repair]. Length = 500

>gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional

 Score = 47.0 bits (112), Expect = 2e-05
 Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 15/164 (9%)

Query: 339 DFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGML-LGEELS-----QAYASG 392
           + L   +++L E  I  +  G   +E EK F          + +  E +      A A  
Sbjct: 323 ELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGL 382

Query: 393 DVFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDIIPE-DQDGKIGYLFNPGDLDDC 450
           D+ +MP + E+ G++ + AMS G IPV     GGI + I E  +D   G++F+    +  
Sbjct: 383 DMLLMPGKIESCGMLQMFAMSYGTIPVAYA-GGGIVETIEEVSEDKGSGFIFHDYTPEAL 441

Query: 451 LSKLEPLLYNQELRETMGQAARQEMEK-YDWRAATRTIRNEQYN 493
           ++KL   L      E   +   + ME+ + W+ +      E+Y 
Sbjct: 442 VAKLGEALALYHDEERWEELVLEAMERDFSWKNSA-----EEYA 480

Length = 489

>gnl|CDD|222161 pfam13477, Glyco_trans_4_2, Glycosyl transferase 4-like

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 141 QNFIKYLREMGDEVMVVTTHEGVPQE--FYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS 198
             +IK L+E G EV +VT      +     G K+    S P P   K P       R+  
Sbjct: 14  LKWIKGLKERGYEVHIVTPDGDKKEYLIAEGIKVH---SLPIPR--KGPFEYLKLFRLKK 68

Query: 199 EVARFKPDIIHASSP-GIMVFGALIIAKLLCVPIVMSYH-THVPVYIPRYTFSWLVKPMW 256
            + + KPDI+HA       + G L       +P+++S   +          F        
Sbjct: 69  LIKKIKPDIVHAHYAKPYGLLGRLAARLSGVIPVILSVWGSDF------LKFPLKSPLKK 122

Query: 257 LVIKFLHRAADLTLV 271
           L+ KF  + AD  + 
Sbjct: 123 LLYKFALKKADKIIS 137

Length = 139

>gnl|CDD|185101 PRK15179, PRK15179, Vi polysaccharide biosynthesis protein TviE; Provisional

 Score = 45.8 bits (108), Expect = 5e-05
 Identities = 64/283 (22%), Positives = 102/283 (36%), Gaps = 65/283 (22%)

Query: 192 LSPRIISEVARFKP-------DIIHASSPGIMVFGALIIAKLLCVP-IVMSYHTHVPVYI 243
           L  +II    +           ++H    G +   AL  A L  VP IV+S  T  PV  
Sbjct: 381 LPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALA-ALLAGVPRIVLSVRTMPPV-- 437

Query: 244 PRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF 303
                    +P    +++    ++L  +  VA    L +    AA++   W  GVD    
Sbjct: 438 --------DRPDRYRVEYDIIYSELLKMRGVA----LSSNSQFAAHRYADWL-GVDERRI 484

Query: 304 H---------------------PRFRSSEMRWRLSNG-----EPDKPLIVHVGRLGVEKS 337
                                  +F +     R + G     + +K        L VE +
Sbjct: 485 PVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKR-----PFLWVEAA 539

Query: 338 LDFLKRVMDRLPEARIAFIGDGPYREEL----EKMFTGMPAVFTGMLLGEELSQAYASGD 393
             F        P+ R   +G GP  E +    +++  G   +FTG  L   +       +
Sbjct: 540 QRFAAS----HPKVRFIMVGGGPLLESVREFAQRLGMGERILFTG--LSRRVGYWLTQFN 593

Query: 394 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG 436
            F++ S  E L  V++EA  SG+PVV   AGG  + + E   G
Sbjct: 594 AFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTG 636

Length = 694

>gnl|CDD|185387 PRK15490, PRK15490, Vi polysaccharide biosynthesis protein TviE; Provisional

 Score = 45.1 bits (106), Expect = 8e-05
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 338 LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAY--ASGDVF 395
           +DF  R +   P  R   +GDG  R E +K    +  +   + +G      Y     +VF
Sbjct: 417 IDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVF 476

Query: 396 VMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI 438
           ++ S  E L  V++EA   G+PV+   AGG  +   E   G I
Sbjct: 477 ILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFI 519

Length = 578

>gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 43.7 bits (104), Expect = 2e-04
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 400 ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY 459
            +E  G+V LEAM +G PV+   +GG  + +    DG+ G+L  P   ++    +  L  
Sbjct: 308 SNEHFGIVPLEAMYAGKPVIACNSGGPLETV---VDGETGFLCEP-TPEEFAEAMLKLAN 363

Query: 460 NQELRETMGQAARQ 473
           + +L + MG A R+
Sbjct: 364 DPDLADRMGAAGRK 377

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392

>gnl|CDD|234105 TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 59/220 (26%), Positives = 84/220 (38%), Gaps = 48/220 (21%)

Query: 282 AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL----GVEKS 337
           A R+TA         GVD++ F P       R   +   P K ++V  G +     ++  
Sbjct: 195 AGRITAFPN------GVDADFFSPD------RDYPNPYPPGKRVLVFTGAMDYWPNIDAV 242

Query: 338 LDFLKRVM----DRLPEARIAFIGDGPYREELEKMFTGMPAVF-TGMLLGEELSQAYASG 392
           + F +RV      R P A    +G  P      +    +P V  TG +   ++    A  
Sbjct: 243 VWFAERVFPAVRARRPAAEFYIVGAKPSPAV--RALAALPGVTVTGSV--ADVRPYLAHA 298

Query: 393 DVFVMPSESETLGLV------VLEAMSSGIPVV--GVRAGGIPDIIPEDQDGKIG-YLFN 443
            V V P     L +       VLEAM+   PVV     A GI        D   G  L  
Sbjct: 299 AVAVAP-----LRIARGIQNKVLEAMAMAKPVVASPEAAEGI--------DALPGAELLV 345

Query: 444 PGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWRA 482
             D  D  + +  LL N   RE +GQAAR+ + + Y W  
Sbjct: 346 AADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPR 385

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 397

>gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional

 Score = 42.8 bits (101), Expect = 4e-04
 Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 12/120 (10%)

Query: 320 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVF- 376
           +PD  L+  + RL  +K LD L   +  L    A++A +G G    ELE  F      + 
Sbjct: 292 DPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSG--DAELEARFRAAAQAYP 349

Query: 377 --TGMLLG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDII 430
              G+++G  E L+    A  D  ++PS  E  GL  L A+  G +PVV  R GG+ D +
Sbjct: 350 GQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVA-RVGGLADTV 408

Length = 485

>gnl|CDD|236670 PRK10307, PRK10307, putative glycosyl transferase; Provisional

 Score = 41.9 bits (99), Expect = 7e-04
 Identities = 90/387 (23%), Positives = 140/387 (36%), Gaps = 77/387 (19%)

Query: 145 KYLREM-------GDEVMVVTT---------HEGVPQEFYGAKLIGS-RSFPCPWYQKVP 187
           KY  EM       G EV V+T           EG     Y  +  G    + CP Y  VP
Sbjct: 19  KYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLY--VP 76

Query: 188 ------------LSLALSPR-IISEVARFKPDIIHASSPGIMVF-GALIIAKLLCVPIVM 233
                        S ALS    +    R++PD +    P +    GA ++A+L      +
Sbjct: 77  KQPSGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGARTWL 136

Query: 234 SYHTHVPVYIPRYTFSW-LVKPMWL------VIKFLHRAADL--TLVPSV---AIGKDLE 281
               H+  Y     F   L+K   +        + L R  D   T+  S+   A  K + 
Sbjct: 137 ----HIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVA 192

Query: 282 AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIV-HVGRL----GVEK 336
           A +V        W    +   F P   +     R   G PD   IV + G +    G+E 
Sbjct: 193 AEKVIF---FPNW---SEVARFQPVADADVDALRAQLGLPDGKKIVLYSGNIGEKQGLEL 246

Query: 337 SLDFLKRVMDRLPEARIAFIGDGPYREELEKM--FTGMPAV-FTGMLLGEELSQAYASGD 393
            +D  +R+ DR P+      G G  +  LEKM    G+P V F  +   + L       D
Sbjct: 247 VIDAARRLRDR-PDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMAD 305

Query: 394 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII---PEDQDGK----IGYLFNPGD 446
             ++P ++    LV    + S +    + A G   +    P  + G+    IG    P  
Sbjct: 306 CHLLPQKAGAADLV----LPSKL--TNMLASGRNVVATAEPGTELGQLVEGIGVCVEPES 359

Query: 447 LDDCLSKLEPLLYNQELRETMGQAARQ 473
           ++  ++ +  L     LR  +G  AR+
Sbjct: 360 VEALVAAIAALARQALLRPKLGTVARE 386

Length = 412

>gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase

 Score = 40.7 bits (96), Expect = 0.002
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 18/98 (18%)

Query: 394 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 453
            FV P+  E  GL V+EAM+ G+P      GG  +II    DG  G+  +P   D+  +K
Sbjct: 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEII---VDGVSGFHIDPYHGDEAANK 725

Query: 454 L---------EPLLYNQELRETMGQAARQEM-EKYDWR 481
           +         +P  +N+     +  A  Q + E Y W+
Sbjct: 726 IADFFEKCKEDPSYWNK-----ISDAGLQRIYECYTWK 758

Length = 815

>gnl|CDD|99978 cd03806, GT1_ALG11_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 39.5 bits (93), Expect = 0.004
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 26/147 (17%)

Query: 335 EKSLDFLKR-VMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGD 393
           EK ++ LK    +   E ++ F+ + P+ E                 L EELS A     
Sbjct: 288 EKRVEDLKLLAKELGLEDKVEFVVNAPFEE-----------------LLEELSTASIG-- 328

Query: 394 VFVMPSESETLGLVVLEAMSSG-IPVVGVRAGGIPDIIPEDQDGKIGYLF-NPGDLDDCL 451
           +  M   +E  G+ V+E M++G IP+     G + DI+     G  G+L     +  + +
Sbjct: 329 LHTM--WNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLASTAEEYAEAI 386

Query: 452 SKLEPLLYNQELRETMGQAARQEMEKY 478
            K+  L  ++E R  + +AAR  ++++
Sbjct: 387 EKI--LSLSEEERLRIRRAARSSVKRF 411

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. Length = 419

>gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups

 Score = 39.5 bits (92), Expect = 0.004
 Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 19/157 (12%)

Query: 316 LSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMP 373
           LS+ +  +PL+  + RL  +K +  ++  + +  E   +   +G  P    +++ F G+ 
Sbjct: 772 LSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPV-PHIQREFEGIA 830

Query: 374 AVFTG-----MLL--GEELSQA-YASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAG 424
             F       ++L   E LS + YA+ D+F++PS  E  GL  + AM  G +P+V  + G
Sbjct: 831 DQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVR-KTG 889

Query: 425 GIPDIIPEDQDGKI------GYLFNPGDLDDCLSKLE 455
           G+ D + +  D  I      G+ F   D     S LE
Sbjct: 890 GLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALE 926

Length = 977

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	526
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	100.0
PLN02939	977	transferase, transferring glycosyl groups	100.0
PRK10307	412	putative glycosyl transferase; Provisional	100.0
PRK00654	466	glgA glycogen synthase; Provisional	100.0
PLN02316	1036	synthase/transferase	100.0
PRK14099	485	glycogen synthase; Provisional	100.0
cd03796	398	GT1_PIG-A_like This family is most closely related	100.0
PRK14098	489	glycogen synthase; Provisional	100.0
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	100.0
cd04962	371	GT1_like_5 This family is most closely related to	100.0
cd03814	364	GT1_like_2 This family is most closely related to	100.0
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	100.0
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	100.0
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	100.0
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	100.0
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	100.0
PLN02846	462	digalactosyldiacylglycerol synthase	100.0
cd03800	398	GT1_Sucrose_synthase This family is most closely r	100.0
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	100.0
cd04955	363	GT1_like_6 This family is most closely related to	100.0
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	100.0
cd03817	374	GT1_UGDG_like This family is most closely related	100.0
cd03818	396	GT1_ExpC_like This family is most closely related	100.0
cd03795	357	GT1_like_4 This family is most closely related to	100.0
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	100.0
TIGR02470	784	sucr_synth sucrose synthase. This model represents	100.0
cd03805	392	GT1_ALG2_like This family is most closely related	100.0
PRK10125	405	putative glycosyl transferase; Provisional	100.0
cd03801	374	GT1_YqgM_like This family is most closely related	100.0
cd03809	365	GT1_mtfB_like This family is most closely related	100.0
cd03802	335	GT1_AviGT4_like This family is most closely relate	100.0
cd03825	365	GT1_wcfI_like This family is most closely related	100.0
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
cd03816	415	GT1_ALG1_like This family is most closely related	100.0
cd03823	359	GT1_ExpE7_like This family is most closely related	100.0
cd03798	377	GT1_wlbH_like This family is most closely related	100.0
cd03794	394	GT1_wbuB_like This family is most closely related	100.0
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	100.0
cd04951	360	GT1_WbdM_like This family is most closely related	100.0
cd03821	375	GT1_Bme6_like This family is most closely related	100.0
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	100.0
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
cd03812	358	GT1_CapH_like This family is most closely related	100.0
cd03822	366	GT1_ecORF704_like This family is most closely rela	100.0
cd03807	365	GT1_WbnK_like This family is most closely related	100.0
cd03820	348	GT1_amsD_like This family is most closely related	100.0
cd03813	475	GT1_like_3 This family is most closely related to	100.0
cd03808	359	GT1_cap1E_like This family is most closely related	100.0
cd03819	355	GT1_WavL_like This family is most closely related	100.0
PLN00142	815	sucrose synthase	100.0
PLN02949	463	transferase, transferring glycosyl groups	100.0
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
KOG1111	426	consensus N-acetylglucosaminyltransferase complex,	100.0
PLN02501	794	digalactosyldiacylglycerol synthase	100.0
cd03811	353	GT1_WabH_like This family is most closely related	100.0
cd03806	419	GT1_ALG11_like This family is most closely related	100.0
cd03804	351	GT1_wbaZ_like This family is most closely related	100.0
cd04946	407	GT1_AmsK_like This family is most closely related	100.0
PLN02275	371	transferase, transferring glycosyl groups	100.0
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	100.0
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	100.0
PHA01630	331	putative group 1 glycosyl transferase	100.0
cd04949	372	GT1_gtfA_like This family is most closely related	99.97
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.97
PHA01633	335	putative glycosyl transferase group 1	99.97
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.97
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.97
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.96
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.96
PLN02605	382	monogalactosyldiacylglycerol synthase	99.95
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.95
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.95
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.95
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.95
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.95
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	99.94
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.93
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.92
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.91
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.9
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.9
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.9
KOG0853	495	consensus Glycosyltransferase [Cell wall/membrane/	99.89
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.89
KOG2941	444	consensus Beta-1,4-mannosyltransferase [Posttransl	99.87
KOG1387	465	consensus Glycosyltransferase [Cell wall/membrane/	99.87
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.86
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.86
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	99.82
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.81
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.79
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.77
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.75
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.72
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	99.7
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	99.68
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.67
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	99.62
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	99.57
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	99.56
TIGR03492	396	conserved hypothetical protein. This protein famil	99.56
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	99.56
PRK10117	474	trehalose-6-phosphate synthase; Provisional	99.56
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	99.55
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	99.52
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	99.49
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	99.49
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	99.47
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	99.46
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	99.44
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	99.39
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	99.38
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	99.34
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	99.34
COG4641	373	Uncharacterized protein conserved in bacteria [Fun	99.33
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	99.32
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	99.28
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	99.26
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	99.23
PF09314	185	DUF1972: Domain of unknown function (DUF1972); Int	99.23
PF13477	139	Glyco_trans_4_2: Glycosyl transferase 4-like	99.16
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	99.14
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	99.13
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	99.11
COG1817	346	Uncharacterized protein conserved in archaea [Func	99.08
PF08323	245	Glyco_transf_5: Starch synthase catalytic domain;	99.06
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	99.05
PRK10017	426	colanic acid biosynthesis protein; Provisional	98.85
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	98.83
PLN03007	482	UDP-glucosyltransferase family protein	98.77
PRK14089	347	ipid-A-disaccharide synthase; Provisional	98.69
PLN02448	459	UDP-glycosyltransferase family protein	98.64
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	98.64
PLN02208	442	glycosyltransferase family protein	98.64
PLN02670	472	transferase, transferring glycosyl groups	98.63
PLN02764	453	glycosyltransferase family protein	98.62
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	98.56
KOG3742	692	consensus Glycogen synthase [Carbohydrate transpor	98.49
COG4671	400	Predicted glycosyl transferase [General function p	98.48
PLN02210	456	UDP-glucosyl transferase	98.46
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	98.45
PLN02562	448	UDP-glycosyltransferase	98.44
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	98.42
PLN00414	446	glycosyltransferase family protein	98.42
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	98.41
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	98.37
PLN02173	449	UDP-glucosyl transferase family protein	98.36
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	98.34
PLN02992	481	coniferyl-alcohol glucosyltransferase	98.32
PLN02534	491	UDP-glycosyltransferase	98.11
PF11440	355	AGT: DNA alpha-glucosyltransferase; InterPro: IPR0	98.04
PLN02152	455	indole-3-acetate beta-glucosyltransferase	97.97
PLN00164	480	glucosyltransferase; Provisional	97.96
PLN03015	470	UDP-glucosyl transferase	97.91
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	97.87
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	97.86
PLN02555	480	limonoid glucosyltransferase	97.81
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	97.8
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	97.79
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	97.74
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	97.72
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	97.71
COG2327	385	WcaK Polysaccharide pyruvyl transferase family pro	97.67
PF11997	268	DUF3492: Domain of unknown function (DUF3492); Int	97.6
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	97.44
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	97.43
KOG1050	732	consensus Trehalose-6-phosphate synthase component	97.43
PF12000	171	Glyco_trans_4_3: Gkycosyl transferase family 4 gro	97.42
PLN03004	451	UDP-glycosyltransferase	97.41
PLN02554	481	UDP-glycosyltransferase family protein	97.34
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	97.21
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	97.16
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	97.08
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	97.08
PF08660	170	Alg14: Oligosaccharide biosynthesis protein Alg14	97.06
PF00862	550	Sucrose_synth: Sucrose synthase; InterPro: IPR0003	97.04
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.0
PF04413	186	Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid	96.99
PLN02207	468	UDP-glycosyltransferase	96.97
PLN02167	475	UDP-glycosyltransferase family protein	96.75
PF12038	168	DUF3524: Domain of unknown function (DUF3524); Int	96.6
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	96.51
PF06925	169	MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy	96.47
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	96.35
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	96.19
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	96.18
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	96.07
PRK14986	815	glycogen phosphorylase; Provisional	95.95
PF10933	364	DUF2827: Protein of unknown function (DUF2827); In	95.77
KOG4626	966	consensus O-linked N-acetylglucosamine transferase	95.66
PF08288	90	PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP	95.33
cd04300	797	GT1_Glycogen_Phosphorylase This is a family of oli	95.3
PRK14985	798	maltodextrin phosphorylase; Provisional	95.23
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	94.86
COG1887	388	TagB Putative glycosyl/glycerophosphate transferas	94.02
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	93.81
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	92.91
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	92.08
PF00551	181	Formyl_trans_N: Formyl transferase; InterPro: IPR0	90.46
KOG3349	170	consensus Predicted glycosyltransferase [General f	89.5
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	89.0
PF02951	119	GSH-S_N: Prokaryotic glutathione synthetase, N-ter	88.11
COG2910	211	Putative NADH-flavin reductase [General function p	87.92
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	87.61
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	86.35
COG0569	225	TrkA K+ transport systems, NAD-binding component [	85.38
), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF02844">PF02844	100	GARS_N: Phosphoribosylglycinamide synthetase, N do	85.34
PRK05647	200	purN phosphoribosylglycinamide formyltransferase;	85.18
PRK06849	389	hypothetical protein; Provisional	84.61
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	84.49
TIGR00639	190	PurN phosphoribosylglycinamide formyltransferase,	84.29
COG2120	237	Uncharacterized proteins, LmbE homologs [Function	83.84
PRK01372	304	ddl D-alanine--D-alanine ligase; Reviewed	83.72
PF12996	79	DUF3880: DUF based on E. rectale Gene description	83.65
PRK13789	426	phosphoribosylamine--glycine ligase; Provisional	82.99
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	82.84
PF03033	139	Glyco_transf_28: Glycosyltransferase family 28 N-t	82.67
PRK06395	435	phosphoribosylamine--glycine ligase; Provisional	82.19
PF01012	164	ETF: Electron transfer flavoprotein domain; InterP	82.19
PF01975	196	SurE: Survival protein SurE; InterPro: IPR002828 T	80.77
PRK00207	128	sulfur transfer complex subunit TusD; Validated	80.19

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=100.00  E-value=1.9e-56  Score=461.07  Aligned_cols=407  Identities=82%  Similarity=1.349  Sum_probs=349.5

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccH
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSP  194 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (526)
                      ..++|||+++++..|++..||.+.++.+++++|.++||+|++++..........+..+.+...++.+.+......+....
T Consensus        55 ~~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~  134 (465)
T PLN02871         55 RSRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQEFHGAKVIGSWSFPCPFYQKVPLSLALSP  134 (465)
T ss_pred             cCCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCccccCceeeccCCcCCccCCCceeeccCCH
Confidence            37889999999888888899999999999999999999999999876544444455555555555444444444444455


Q ss_pred             HHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCCh
Q 009759          195 RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV  274 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~  274 (526)
                      .+.+.+++.+||+||+|.+....+.++.+++..++|+|+++|++.+.+.......+..+..+.+++.+++.+|.++++|+
T Consensus       135 ~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~  214 (465)
T PLN02871        135 RIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSP  214 (465)
T ss_pred             HHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCH
Confidence            78889999999999999876666666667788899999999997765544433333333344567888899999999999


Q ss_pred             hHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCCCcEEE
Q 009759          275 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIA  354 (526)
Q Consensus       275 ~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~  354 (526)
                      ..++.+.+.+..+.+++.+++||+|.+.|.+.......+.++....+++++|+|+|++.+.||++.++++++++++++|+
T Consensus       215 ~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~~~~~l~  294 (465)
T PLN02871        215 ALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERLPGARLA  294 (465)
T ss_pred             HHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhCCCcEEE
Confidence            99999998775556899999999999988776555555555543345678899999999999999999999999999999


Q ss_pred             EEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccC
Q 009759          355 FIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ  434 (526)
Q Consensus       355 ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~  434 (526)
                      |+|+|++.+++++++++.+|+|+|+++++|+..+|+.||++|+||..|++|++++||||+|+|||+++.||..|++   +
T Consensus       295 ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv---~  371 (465)
T PLN02871        295 FVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDII---P  371 (465)
T ss_pred             EEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhh---h
Confidence            9999999999999988889999999999999999999999999999999999999999999999999999999999   7


Q ss_pred             C---CceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhhhcccCchh
Q 009759          435 D---GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKKRAQLLRPIQ  511 (526)
Q Consensus       435 ~---~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~~~~~~~~~~~~~~~  511 (526)
                      +   +.+|++++++|+++++++|.++++|++.+++|++++++.+++|+|+.+++++++..|+++++.|++++.+++++++
T Consensus       372 ~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~~~~~~~~~~~~~  451 (465)
T PLN02871        372 PDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFWRKKRAQLLGPVQ  451 (465)
T ss_pred             cCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            7   8999999999999999999999999999999999999999999999999999866899999999999999999999


Q ss_pred             hhhhhcCCCCcCC
Q 009759          512 WLAKRIFPSAEVN  524 (526)
Q Consensus       512 ~~~~~~~~~~~~~  524 (526)
                      |.+..+++.|+.|
T Consensus       452 ~~~~~~~~~~~~~  464 (465)
T PLN02871        452 WLPAQLFPAPEVN  464 (465)
T ss_pred             hhhhhcccccccC
Confidence            9999999999876

>PLN02939 transferase, transferring glycosyl groups

Probab=100.00  E-value=6.7e-44  Score=372.58  Aligned_cols=383  Identities=19%  Similarity=0.220  Sum_probs=282.2

Q ss_pred             CCCCcEEEEE-eccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc--ccCc------------------ee-
Q 009759          115 NSRPRRIALF-VEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE--FYGA------------------KL-  172 (526)
Q Consensus       115 ~~~~mkIliv-~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~--~~~~------------------~~-  172 (526)
                      ...+|||++| ++..|+...||.+.++..|.++|+++||+|.|+++.+.....  ..+.                  .+ 
T Consensus       478 ~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  557 (977)
T PLN02939        478 TSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIW  557 (977)
T ss_pred             CCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEE
Confidence            4667999999 666799999999999999999999999999999997753320  0000                  00 


Q ss_pred             ----ccccccCCC------ccccc--c-------chhcccHHHHHHHHh--cCCCEEEECCCchHHHHHHHHHH-----h
Q 009759          173 ----IGSRSFPCP------WYQKV--P-------LSLALSPRIISEVAR--FKPDIIHASSPGIMVFGALIIAK-----L  226 (526)
Q Consensus       173 ----~~~~~~~~~------~~~~~--~-------~~~~~~~~l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~~-----~  226 (526)
                          .++..+-+.      ++.+-  .       ....+.+....++..  ++|||||+|+|+....+.++...     .
T Consensus       558 ~~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~  637 (977)
T PLN02939        558 TGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGF  637 (977)
T ss_pred             EEEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccC
Confidence                011111000      11000  0       011222334455554  69999999999876654433321     2


Q ss_pred             cCCCEEEEEecCCcccccc------ccc--ccc---------cchHHHHHHHHhhcCcEEEeCChhHHHHHHHhc-----
Q 009759          227 LCVPIVMSYHTHVPVYIPR------YTF--SWL---------VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR-----  284 (526)
Q Consensus       227 ~~~p~v~~~h~~~~~~~~~------~~~--~~~---------~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~-----  284 (526)
                      .++|+|+++|+........      ...  ..+         ......+.+..+..+|.|+++|+.+++++...+     
T Consensus       638 ~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~  717 (977)
T PLN02939        638 NSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQ  717 (977)
T ss_pred             CCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchH
Confidence            4689999999964221100      000  000         001124455667789999999999999987632     


Q ss_pred             ---ccCCCcEEEeecCCCCCCCCCCcc------------------cHHHHHhhcCCC--CCCcEEEEEecccccccHHHH
Q 009759          285 ---VTAANKIRIWKKGVDSESFHPRFR------------------SSEMRWRLSNGE--PDKPLIVHVGRLGVEKSLDFL  341 (526)
Q Consensus       285 ---~~~~~ki~vi~ngid~~~~~~~~~------------------~~~~~~~~~~~~--~~~~~i~~vG~l~~~Kg~~~l  341 (526)
                         .....++.+|+||||.+.|.|..+                  +..++.++++..  ++.++|+|+||+.++||++.+
T Consensus       718 ~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlL  797 (977)
T PLN02939        718 DTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLI  797 (977)
T ss_pred             HHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHH
Confidence               235678999999999999988643                  345677777643  357899999999999999999


Q ss_pred             HHHHHhC--CCcEEEEEeCCcc---HHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHH
Q 009759          342 KRVMDRL--PEARIAFIGDGPY---REELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM  412 (526)
Q Consensus       342 i~a~~~l--~~~~l~ivG~g~~---~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAm  412 (526)
                      ++|+..+  ++++|+|+|+|+.   .+.++.++...    +|.|.|.+++...+.+|+.||++|+||++|+||++++|||
T Consensus       798 leA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAM  877 (977)
T PLN02939        798 RHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAM  877 (977)
T ss_pred             HHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHH
Confidence            9999876  5799999999964   35566665543    5999999987778899999999999999999999999999


Q ss_pred             HcCCcEEEeCCCCCCceeccc------CCCceeEeeCCCCHHHHHHHHHHhhh----CHHHHHHHHHHHHHHHHhCCHHH
Q 009759          413 SSGIPVVGVRAGGIPDIIPED------QDGKIGYLFNPGDLDDCLSKLEPLLY----NQELRETMGQAARQEMEKYDWRA  482 (526)
Q Consensus       413 a~G~PvI~~~~gg~~e~v~~~------~~~~~g~~~~~~d~~~la~ai~~ll~----d~~~~~~~~~~a~~~~~~fs~~~  482 (526)
                      +||+|+|++++||+.|.+.+.      .++.+|+++++.|+++|+++|.+++.    |++.+++|++++.  .++|||+.
T Consensus       878 AyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am--~~dFSWe~  955 (977)
T PLN02939        878 RYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM--NIDFSWDS  955 (977)
T ss_pred             HCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH--HhcCCHHH
Confidence            999999999999999998321      12579999999999999999998875    7999999987653  26899999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 009759          483 ATRTIRNEQYNAAIWFWR  500 (526)
Q Consensus       483 ~~~~~~~~ly~~~l~~~~  500 (526)
                      ++++|+ ++|++++...+
T Consensus       956 ~A~qYe-eLY~~ll~~~~  972 (977)
T PLN02939        956 SASQYE-ELYQRAVARAR  972 (977)
T ss_pred             HHHHHH-HHHHHHHHhhh
Confidence            999997 89999987543

>PRK10307 putative glycosyl transferase; Provisional

Probab=100.00  E-value=1.2e-43  Score=361.51  Aligned_cols=370  Identities=18%  Similarity=0.208  Sum_probs=282.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc---------------cccCceeccccccCCCcc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ---------------EFYGAKLIGSRSFPCPWY  183 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~---------------~~~~~~~~~~~~~~~~~~  183 (526)
                      |||++++..++ |..||.+.++.+++++|.++||+|+|+++....+.               ...++.+.++........
T Consensus         1 mkIlii~~~~~-P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~~   79 (412)
T PRK10307          1 MKILVYGINYA-PELTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQP   79 (412)
T ss_pred             CeEEEEecCCC-CCccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCCc
Confidence            89999998664 67899999999999999999999999997532111               012233333222111000


Q ss_pred             ccccc---hhcccH-HHHHHHH--hcCCCEEEECCCchH-HHHHHHHHHhcCCCEEEEEecCCccccccc---ccccccc
Q 009759          184 QKVPL---SLALSP-RIISEVA--RFKPDIIHASSPGIM-VFGALIIAKLLCVPIVMSYHTHVPVYIPRY---TFSWLVK  253 (526)
Q Consensus       184 ~~~~~---~~~~~~-~l~~~l~--~~~pDiV~~~~~~~~-~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---~~~~~~~  253 (526)
                      .....   ...+.. .+..+++  +.+||+||+|.+... ...+..+++..++|+++++||.++......   ......+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~  159 (412)
T PRK10307         80 SGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVAR  159 (412)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHH
Confidence            00000   000111 1111222  268999999987544 344566778889999999998765322111   1122223


Q ss_pred             hHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcc--cHHHHHhhcCCCCCCcEEEEEec
Q 009759          254 PMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR--SSEMRWRLSNGEPDKPLIVHVGR  331 (526)
Q Consensus       254 ~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~vG~  331 (526)
                      ....+++.+++.+|.++++|+.+++.+.+.+ .+..++.+||||+|.+.+.+...  ....+.+++. .++.++++|+|+
T Consensus       160 ~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~-~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~  237 (412)
T PRK10307        160 LATAFERSLLRRFDNVSTISRSMMNKAREKG-VAAEKVIFFPNWSEVARFQPVADADVDALRAQLGL-PDGKKIVLYSGN  237 (412)
T ss_pred             HHHHHHHHHHhhCCEEEecCHHHHHHHHHcC-CCcccEEEECCCcCHhhcCCCCccchHHHHHHcCC-CCCCEEEEEcCc
Confidence            3446788899999999999999999998765 36678999999999988765432  2244555544 456788999999


Q ss_pred             ccccccHHHHHHHHHhC---CCcEEEEEeCCccHHHHHHHhcCC---CeEEecccChhhHHHHHHcCcEEEecCCCCC--
Q 009759          332 LGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGM---PAVFTGMLLGEELSQAYASGDVFVMPSESET--  403 (526)
Q Consensus       332 l~~~Kg~~~li~a~~~l---~~~~l~ivG~g~~~~~l~~l~~~~---~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~--  403 (526)
                      +.+.||++.+++|++.+   ++++|+|+|+|+..+++++++++.   +|.|+|+++.+++.++|++||++++|+..|+  
T Consensus       238 l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~  317 (412)
T PRK10307        238 IGEKQGLELVIDAARRLRDRPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMADCHLLPQKAGAAD  317 (412)
T ss_pred             cccccCHHHHHHHHHHhccCCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcCEeEEeeccCccc
Confidence            99999999999999877   579999999999888888877643   6999999999999999999999999999887  


Q ss_pred             --CcHHHHHHHHcCCcEEEeCCCCC--CceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhC
Q 009759          404 --LGLVVLEAMSSGIPVVGVRAGGI--PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKY  478 (526)
Q Consensus       404 --~~~~ilEAma~G~PvI~~~~gg~--~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~f  478 (526)
                        +|.+++|||+||+|||+++.+|.  .+++   +  .+|++++++|+++++++|.++++|++.+++|++++++.+ ++|
T Consensus       318 ~~~p~kl~eama~G~PVi~s~~~g~~~~~~i---~--~~G~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~f  392 (412)
T PRK10307        318 LVLPSKLTNMLASGRNVVATAEPGTELGQLV---E--GIGVCVEPESVEALVAAIAALARQALLRPKLGTVAREYAERTL  392 (412)
T ss_pred             ccCcHHHHHHHHcCCCEEEEeCCCchHHHHH---h--CCcEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHc
Confidence              68899999999999999998763  5777   4  589999999999999999999999999999999999999 489


Q ss_pred             CHHHHHHHHHHHHHHHHHH
Q 009759          479 DWRAATRTIRNEQYNAAIW  497 (526)
Q Consensus       479 s~~~~~~~~~~~ly~~~l~  497 (526)
                      ||+.+++++. ++|++++.
T Consensus       393 s~~~~~~~~~-~~~~~~~~  410 (412)
T PRK10307        393 DKENVLRQFI-ADIRGLVA  410 (412)
T ss_pred             CHHHHHHHHH-HHHHHHhc
Confidence            9999999997 89988875

>PRK00654 glgA glycogen synthase; Provisional

Probab=100.00  E-value=1.4e-43  Score=364.74  Aligned_cols=371  Identities=20%  Similarity=0.261  Sum_probs=270.8

Q ss_pred             cEEEEEecc-CCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc----------------------ccCceeccc
Q 009759          119 RRIALFVEP-SPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE----------------------FYGAKLIGS  175 (526)
Q Consensus       119 mkIliv~~~-~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~----------------------~~~~~~~~~  175 (526)
                      |||++++.. +|+...||.+.++..|+++|+++||+|.|+++.++....                      ..+++++.+
T Consensus         1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v   80 (466)
T PRK00654          1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLI   80 (466)
T ss_pred             CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEE
Confidence            899999654 788889999999999999999999999999987653210                      011211111


Q ss_pred             cc---cCCC-ccccccch---hcccHHHHHHHHh--cCCCEEEECCCchHHHHHHHHHHh-----cCCCEEEEEecCCcc
Q 009759          176 RS---FPCP-WYQKVPLS---LALSPRIISEVAR--FKPDIIHASSPGIMVFGALIIAKL-----LCVPIVMSYHTHVPV  241 (526)
Q Consensus       176 ~~---~~~~-~~~~~~~~---~~~~~~l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~~~-----~~~p~v~~~h~~~~~  241 (526)
                      ..   +... .+......   ..+.....+++++  .+|||||+|+|.....+ .++++.     .++|+|+|+|+....
T Consensus        81 ~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~-~~l~~~~~~~~~~~~~v~TiH~~~~~  159 (466)
T PRK00654         81 DAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIP-ALLKEKYWRGYPDIKTVFTIHNLAYQ  159 (466)
T ss_pred             eCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHH-HHHHHhhhccCCCCCEEEEcCCCcCC
Confidence            10   0000 01000000   0122334444443  48999999997654443 333333     379999999996432


Q ss_pred             cccc------ccc---cc-ccc----hHHHHHHHHhhcCcEEEeCChhHHHHHHHhc---------ccCCCcEEEeecCC
Q 009759          242 YIPR------YTF---SW-LVK----PMWLVIKFLHRAADLTLVPSVAIGKDLEAAR---------VTAANKIRIWKKGV  298 (526)
Q Consensus       242 ~~~~------~~~---~~-~~~----~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~---------~~~~~ki~vi~ngi  298 (526)
                      ....      ...   .+ ...    ....+.+..+..+|.++++|+.+++++....         ..+.+++.+|+||+
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGi  239 (466)
T PRK00654        160 GLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGI  239 (466)
T ss_pred             CcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCC
Confidence            1100      000   00 000    0123456678999999999999999887521         22457899999999


Q ss_pred             CCCCCCCCcc------------------cHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC--CCcEEEEEeC
Q 009759          299 DSESFHPRFR------------------SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGD  358 (526)
Q Consensus       299 d~~~~~~~~~------------------~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l--~~~~l~ivG~  358 (526)
                      |.+.|.|...                  +..++.++++..++.++|+|+||+.++||++.+++|++++  .+++|+|+|+
T Consensus       240 d~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~  319 (466)
T PRK00654        240 DYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGT  319 (466)
T ss_pred             CccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEec
Confidence            9999987532                  2345666666445788999999999999999999999887  4799999998


Q ss_pred             Cc--cHHHHHHHhcCC--CeEE-ecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceeccc
Q 009759          359 GP--YREELEKMFTGM--PAVF-TGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED  433 (526)
Q Consensus       359 g~--~~~~l~~l~~~~--~V~~-~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~  433 (526)
                      |+  +.+.+++++++.  ++.+ .|+ +.+++..+|++||++|+||++|+||++++|||+||+|+|++++||+.|++   
T Consensus       320 g~~~~~~~l~~l~~~~~~~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v---  395 (466)
T PRK00654        320 GDPELEEAFRALAARYPGKVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTV---  395 (466)
T ss_pred             CcHHHHHHHHHHHHHCCCcEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCcccee---
Confidence            75  356777777654  4554 455 55667899999999999999999999999999999999999999999999   


Q ss_pred             CCC------ceeEeeCCCCHHHHHHHHHHhhh---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 009759          434 QDG------KIGYLFNPGDLDDCLSKLEPLLY---NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  497 (526)
Q Consensus       434 ~~~------~~g~~~~~~d~~~la~ai~~ll~---d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~  497 (526)
                      .++      .+|++++++|+++++++|.++++   +++.++++++++++  ++|||+.++++++ ++|+++++
T Consensus       396 ~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~-~lY~~~~~  465 (466)
T PRK00654        396 IDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYL-ELYRRLLG  465 (466)
T ss_pred             ecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHH-HHHHHHhh
Confidence            666      89999999999999999999876   67778888777653  5899999999997 89998864

>PLN02316 synthase/transferase

Probab=100.00  E-value=5.7e-43  Score=372.64  Aligned_cols=363  Identities=18%  Similarity=0.226  Sum_probs=271.7

Q ss_pred             CCCCcEEEEE-eccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc--ccCce------------------ec
Q 009759          115 NSRPRRIALF-VEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE--FYGAK------------------LI  173 (526)
Q Consensus       115 ~~~~mkIliv-~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~--~~~~~------------------~~  173 (526)
                      ...+|||++| .+..|+...||.+.++..|+++|+++||+|.|+++.+.....  .....                  .-
T Consensus       584 ~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  663 (1036)
T PLN02316        584 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVE  663 (1036)
T ss_pred             CCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEEC
Confidence            3456999999 466788899999999999999999999999999997753110  00000                  00


Q ss_pred             cccccCCC----cccc---------ccchhcccHHHHHHHHh--cCCCEEEECCCchHHHHHHHHHH------hcCCCEE
Q 009759          174 GSRSFPCP----WYQK---------VPLSLALSPRIISEVAR--FKPDIIHASSPGIMVFGALIIAK------LLCVPIV  232 (526)
Q Consensus       174 ~~~~~~~~----~~~~---------~~~~~~~~~~l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~~------~~~~p~v  232 (526)
                      ++..+-+.    ++..         ......+......++.+  .+|||||+|+|.....+. +++.      ..++|+|
T Consensus       664 GV~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~-llk~~~~~~~~~~~p~V  742 (1036)
T PLN02316        664 GLSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAW-LFKDHYAHYGLSKARVV  742 (1036)
T ss_pred             CcEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHH-HHHHhhhhhccCCCCEE
Confidence            11111000    1100         00111222334444443  589999999986544433 3333      2468999


Q ss_pred             EEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhccc--CCCcEEEeecCCCCCCCCCCcc--
Q 009759          233 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVT--AANKIRIWKKGVDSESFHPRFR--  308 (526)
Q Consensus       233 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~--~~~ki~vi~ngid~~~~~~~~~--  308 (526)
                      +++|+....              ....+..+..+|.|+++|+.+++++...+..  ...++.+|+||||.+.|.|..+  
T Consensus       743 ~TiHnl~~~--------------~n~lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~  808 (1036)
T PLN02316        743 FTIHNLEFG--------------ANHIGKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNF  808 (1036)
T ss_pred             EEeCCcccc--------------hhHHHHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEEEECCccccccCCccccc
Confidence            999985311              0124457789999999999999999876542  2479999999999998876422  


Q ss_pred             -----------------cHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC--CCcEEEEEeCCcc---HHHHH
Q 009759          309 -----------------SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPY---REELE  366 (526)
Q Consensus       309 -----------------~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l--~~~~l~ivG~g~~---~~~l~  366 (526)
                                       +..++.++++...+.++|+|+||+.++||++.|++|+..+  .+++|+|+|+|+.   .+.++
T Consensus       809 lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~  888 (1036)
T PLN02316        809 IPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFV  888 (1036)
T ss_pred             ccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHH
Confidence                             2235666766444678999999999999999999999886  5799999999864   45666


Q ss_pred             HHhcC------CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCC-----
Q 009759          367 KMFTG------MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD-----  435 (526)
Q Consensus       367 ~l~~~------~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~-----  435 (526)
                      +++..      .+|.|.|..+....+.+|+.||++|+||++|+||++++|||+||+|+|++++||+.|.+   .+     
T Consensus       889 ~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV---~d~d~~~  965 (1036)
T PLN02316        889 NLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTV---FDVDHDK  965 (1036)
T ss_pred             HHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhc---ccccccc
Confidence            66663      25888887765445689999999999999999999999999999999999999999999   44     


Q ss_pred             --------CceeEeeCCCCHHHHHHHHHHhhhC-HHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHH
Q 009759          436 --------GKIGYLFNPGDLDDCLSKLEPLLYN-QELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAI  496 (526)
Q Consensus       436 --------~~~g~~~~~~d~~~la~ai~~ll~d-~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~~l  496 (526)
                              +.+|+++++.|+++|+.+|.+++.+ .+....+++.+++.+ ++|||+.++++|+ ++|+++.
T Consensus       966 ~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~-~LY~~a~ 1035 (1036)
T PLN02316        966 ERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYM-ELYHSAR 1035 (1036)
T ss_pred             ccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHH-HHHHHHh
Confidence                    3689999999999999999999986 455666788888887 5899999999997 8999875

>PRK14099 glycogen synthase; Provisional

Probab=100.00  E-value=1.3e-42  Score=356.10  Aligned_cols=374  Identities=22%  Similarity=0.249  Sum_probs=272.5

Q ss_pred             CCcEEEEE-eccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-cccC------ce--------e-----ccc
Q 009759          117 RPRRIALF-VEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-EFYG------AK--------L-----IGS  175 (526)
Q Consensus       117 ~~mkIliv-~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~~~~------~~--------~-----~~~  175 (526)
                      ++|||+++ ++..|+.+.||.+.++..|.++|+++||+|.|+.+.++... ....      ..        +     .++
T Consensus         2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   81 (485)
T PRK14099          2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGPARLLAARAGGL   81 (485)
T ss_pred             CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCCceEEEEEEEeCCc
Confidence            46999999 67789999999999999999999999999999999765331 0000      00        0     000


Q ss_pred             ccc--------CCC--cccc-----ccc---hh-cccHHHHHHH----HhcCCCEEEECCCchHHHHHHHHH-HhcCCCE
Q 009759          176 RSF--------PCP--WYQK-----VPL---SL-ALSPRIISEV----ARFKPDIIHASSPGIMVFGALIIA-KLLCVPI  231 (526)
Q Consensus       176 ~~~--------~~~--~~~~-----~~~---~~-~~~~~l~~~l----~~~~pDiV~~~~~~~~~~~~~~~~-~~~~~p~  231 (526)
                      ..+        ..+  .+..     ...   .+ .+......++    .+++|||||+|+|+......++.. ...++|+
T Consensus        82 ~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~  161 (485)
T PRK14099         82 DLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRPAPGT  161 (485)
T ss_pred             eEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCCCCCE
Confidence            000        000  0100     000   01 1122223333    247999999999876554433321 1346899


Q ss_pred             EEEEecCCccc-ccccc-----c--cccc------chHHHHHHHHhhcCcEEEeCChhHHHHHHHhc---------ccCC
Q 009759          232 VMSYHTHVPVY-IPRYT-----F--SWLV------KPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR---------VTAA  288 (526)
Q Consensus       232 v~~~h~~~~~~-~~~~~-----~--~~~~------~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~---------~~~~  288 (526)
                      |+|+|+..... .....     .  ....      .....+.+..+..+|.|+++|+.+++++.+..         ..+.
T Consensus       162 V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~  241 (485)
T PRK14099        162 VFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRA  241 (485)
T ss_pred             EEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhC
Confidence            99999964221 10000     0  0000      00013467788999999999999999987532         1235


Q ss_pred             CcEEEeecCCCCCCCCCCcc------------------cHHHHHhhcCCC-CCCcEEEEEecccccccHHHHHHHHHhC-
Q 009759          289 NKIRIWKKGVDSESFHPRFR------------------SSEMRWRLSNGE-PDKPLIVHVGRLGVEKSLDFLKRVMDRL-  348 (526)
Q Consensus       289 ~ki~vi~ngid~~~~~~~~~------------------~~~~~~~~~~~~-~~~~~i~~vG~l~~~Kg~~~li~a~~~l-  348 (526)
                      +++.+|+||+|.+.|.|...                  +..++.++++.. .+.++++++||+.++||++.+++|+..+ 
T Consensus       242 ~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~  321 (485)
T PRK14099        242 DRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLL  321 (485)
T ss_pred             CCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHH
Confidence            79999999999999987643                  234556666633 3568899999999999999999999877 


Q ss_pred             -CCcEEEEEeCCc--cHHHHHHHhcCC--Ce-EEecccChhhHHHHH-HcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          349 -PEARIAFIGDGP--YREELEKMFTGM--PA-VFTGMLLGEELSQAY-ASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       349 -~~~~l~ivG~g~--~~~~l~~l~~~~--~V-~~~g~v~~~~l~~~~-~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                       .+++|+|+|+|+  ..+.+++++++.  ++ .+.|+  ++++..+| +.||++|+||++|+||++++|||+||+|+|++
T Consensus       322 ~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs  399 (485)
T PRK14099        322 GEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVA  399 (485)
T ss_pred             hcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEe
Confidence             479999999886  456777776543  44 68898  47888876 57999999999999999999999999999999


Q ss_pred             CCCCCCceecccCCC---------ceeEeeCCCCHHHHHHHHHH---hhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 009759          422 RAGGIPDIIPEDQDG---------KIGYLFNPGDLDDCLSKLEP---LLYNQELRETMGQAARQEMEKYDWRAATRTIRN  489 (526)
Q Consensus       422 ~~gg~~e~v~~~~~~---------~~g~~~~~~d~~~la~ai~~---ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~  489 (526)
                      ++||+.|.+   .++         .+|+++++.|+++++++|.+   +++|++.+++++++++  .++|||+.++++++ 
T Consensus       400 ~~GGl~d~V---~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~-  473 (485)
T PRK14099        400 RVGGLADTV---VDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYA-  473 (485)
T ss_pred             CCCCcccee---ecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHH-
Confidence            999999998   443         68999999999999999997   6779999999999886  36899999999997 


Q ss_pred             HHHHHHHHH
Q 009759          490 EQYNAAIWF  498 (526)
Q Consensus       490 ~ly~~~l~~  498 (526)
                      ++|++++..
T Consensus       474 ~lY~~l~~~  482 (485)
T PRK14099        474 ALYRSLVAE  482 (485)
T ss_pred             HHHHHHHhh
Confidence            999999854

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.4e-42  Score=351.65  Aligned_cols=357  Identities=20%  Similarity=0.273  Sum_probs=274.1

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc--c--ccCceeccccccCCCccccccchhcccHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ--E--FYGAKLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      ||+++++.+. |..||.++++..++++|.++||+|+|++...+...  .  ..++.+..++...................
T Consensus         1 kI~~v~~~~~-p~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~~   79 (398)
T cd03796           1 RICMVSDFFY-PNLGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFPL   79 (398)
T ss_pred             CeeEEeeccc-cccccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHHH
Confidence            7899988654 77899999999999999999999999997543211  1  11222222221111100111122334456


Q ss_pred             HHHHHHhcCCCEEEECCCchH-HHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCCh
Q 009759          196 IISEVARFKPDIIHASSPGIM-VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV  274 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~~~~-~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~  274 (526)
                      +.+.+++.+||+||+|++... ...+.++++..++|+|++.|+.++..  .    ..........+..++.+|.++++|+
T Consensus        80 l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~--~----~~~~~~~~~~~~~~~~~d~ii~~s~  153 (398)
T cd03796          80 LRNILIRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFA--D----ASSIHTNKLLRFSLADVDHVICVSH  153 (398)
T ss_pred             HHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEeccccccc--c----hhhHHhhHHHHHhhccCCEEEEecH
Confidence            777888889999999986433 33455667888999999999864311  0    0011122455677899999999999


Q ss_pred             hHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CC
Q 009759          275 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PE  350 (526)
Q Consensus       275 ~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~  350 (526)
                      ...+.+....+.+.+++.+||||+|.+.|.+....         ..++.++++|+|++.+.||++.++++++.+    ++
T Consensus       154 ~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~---------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~  224 (398)
T cd03796         154 TSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK---------RDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPN  224 (398)
T ss_pred             hHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc---------CCCCceEEEEEeccchhcCHHHHHHHHHHHHhhCCC
Confidence            99887644444466899999999998877654321         135678899999999999999999999754    68


Q ss_pred             cEEEEEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC
Q 009759          351 ARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI  426 (526)
Q Consensus       351 ~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~  426 (526)
                      ++|+++|+|+..+.+++++++.    +|.+.|+++.+++..+|+.||++|+||..|++|++++||||||+|||+++.||.
T Consensus       225 ~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~  304 (398)
T cd03796         225 VRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI  304 (398)
T ss_pred             EEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCc
Confidence            9999999998888888777653    599999999999999999999999999999999999999999999999999999


Q ss_pred             CceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHH
Q 009759          427 PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWF  498 (526)
Q Consensus       427 ~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~~l~~  498 (526)
                      .|++   .++. ++++. .|.++++++|.+++++......+++++++.+ ++|||+.++++++ ++|++++..
T Consensus       305 ~e~i---~~~~-~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~-~~y~~l~~~  371 (398)
T cd03796         305 PEVL---PPDM-ILLAE-PDVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKRTE-KVYDRILQT  371 (398)
T ss_pred             hhhe---eCCc-eeecC-CCHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHHHH-HHHHHHhcC
Confidence            9999   5553 44444 4899999999999998776667788888887 6899999999998 999998864

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>PRK14098 glycogen synthase; Provisional

Probab=100.00  E-value=2.3e-42  Score=354.51  Aligned_cols=377  Identities=18%  Similarity=0.261  Sum_probs=275.2

Q ss_pred             CcEEEEE-eccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc----ccC------ce--------ecccc--
Q 009759          118 PRRIALF-VEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE----FYG------AK--------LIGSR--  176 (526)
Q Consensus       118 ~mkIliv-~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~----~~~------~~--------~~~~~--  176 (526)
                      .|||+++ ++..|+.+.||.+.++..|.++|+++||+|.|+.+.+.....    ...      ..        ...+.  
T Consensus         5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (489)
T PRK14098          5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT   84 (489)
T ss_pred             CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence            3999999 677799999999999999999999999999999997643321    000      00        00000  


Q ss_pred             ccC---CC--------------cccc------c----cchhcccHHHHHHHHh--cCCCEEEECCCchHHHHHHHHHH--
Q 009759          177 SFP---CP--------------WYQK------V----PLSLALSPRIISEVAR--FKPDIIHASSPGIMVFGALIIAK--  225 (526)
Q Consensus       177 ~~~---~~--------------~~~~------~----~~~~~~~~~l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~~--  225 (526)
                      ..+   ++              .+..      .    .....+.....+.+++  ++|||||+|+|+....+.++..+  
T Consensus        85 ~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~  164 (489)
T PRK14098         85 ALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYA  164 (489)
T ss_pred             cccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhh
Confidence            000   00              0000      0    0001122234445543  58999999998765444333222  


Q ss_pred             ----hcCCCEEEEEecCCccccccc----------cccccc--chHHHHHHHHhhcCcEEEeCChhHHHHHHHh----cc
Q 009759          226 ----LLCVPIVMSYHTHVPVYIPRY----------TFSWLV--KPMWLVIKFLHRAADLTLVPSVAIGKDLEAA----RV  285 (526)
Q Consensus       226 ----~~~~p~v~~~h~~~~~~~~~~----------~~~~~~--~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~----~~  285 (526)
                          ..++|+|+++|+.........          ...+..  .....+.+..+..+|.|+++|+.+++++.+.    ++
T Consensus       165 ~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~g  244 (489)
T PRK14098        165 DHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFG  244 (489)
T ss_pred             hccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcC
Confidence                137999999998643211100          000000  0112456778899999999999999998752    12


Q ss_pred             c------CCCcEEEeecCCCCCCCCCCcc------------------cHHHHHhhcCC-CCCCcEEEEEecccccccHHH
Q 009759          286 T------AANKIRIWKKGVDSESFHPRFR------------------SSEMRWRLSNG-EPDKPLIVHVGRLGVEKSLDF  340 (526)
Q Consensus       286 ~------~~~ki~vi~ngid~~~~~~~~~------------------~~~~~~~~~~~-~~~~~~i~~vG~l~~~Kg~~~  340 (526)
                      .      ...++.+|+||||.+.|.|...                  +..++.++++. .++.++|+++||+.++||++.
T Consensus       245 l~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~  324 (489)
T PRK14098        245 LDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAEL  324 (489)
T ss_pred             hHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHH
Confidence            2      2579999999999999987643                  22344455553 246789999999999999999


Q ss_pred             HHHHHHhC--CCcEEEEEeCCc--cHHHHHHHhcCC--CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHc
Q 009759          341 LKRVMDRL--PEARIAFIGDGP--YREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  414 (526)
Q Consensus       341 li~a~~~l--~~~~l~ivG~g~--~~~~l~~l~~~~--~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~  414 (526)
                      +++|+..+  ++++|+|+|+|+  +.+.+++++++.  +|.+.|.++++++..+|++||++|+||++|+||++++|||+|
T Consensus       325 li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~  404 (489)
T PRK14098        325 LAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY  404 (489)
T ss_pred             HHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC
Confidence            99999887  579999999886  356777777644  699999999889999999999999999999999999999999


Q ss_pred             CCcEEEeCCCCCCceeccc-CCCceeEeeCCCCHHHHHHHHHHhh---hCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 009759          415 GIPVVGVRAGGIPDIIPED-QDGKIGYLFNPGDLDDCLSKLEPLL---YNQELRETMGQAARQEMEKYDWRAATRTIRNE  490 (526)
Q Consensus       415 G~PvI~~~~gg~~e~v~~~-~~~~~g~~~~~~d~~~la~ai~~ll---~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~  490 (526)
                      |+|+|++++||+.|.+.+. +++.+|+++++.|+++++++|.+++   +|++.++++++++.  .++|||+..+++++ +
T Consensus       405 G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~y~-~  481 (489)
T PRK14098        405 GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEAM--ERDFSWKNSAEEYA-Q  481 (489)
T ss_pred             CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHh--cCCCChHHHHHHHH-H
Confidence            9999999999999988221 2367999999999999999999865   58888888776553  25899999999997 9


Q ss_pred             HHHHHHH
Q 009759          491 QYNAAIW  497 (526)
Q Consensus       491 ly~~~l~  497 (526)
                      +|+++++
T Consensus       482 lY~~~~~  488 (489)
T PRK14098        482 LYRELLG  488 (489)
T ss_pred             HHHHHhc
Confidence            9998863

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=100.00  E-value=5.2e-42  Score=354.74  Aligned_cols=370  Identities=22%  Similarity=0.290  Sum_probs=274.5

Q ss_pred             cEEEEEecc-CCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc-----------------------------c
Q 009759          119 RRIALFVEP-SPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF-----------------------------Y  168 (526)
Q Consensus       119 mkIliv~~~-~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~-----------------------------~  168 (526)
                      |||++++.. .|+...||.+.++..|+++|+++||+|.|+++.++.....                             .
T Consensus         1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (473)
T TIGR02095         1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE   80 (473)
T ss_pred             CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence            899999644 6888899999999999999999999999999877532110                             0


Q ss_pred             Cceeccccc---cCCC--ccc-----cccchhcccHHHHHHHHh--cCCCEEEECCCchHHHHHHHHHHhcC---CCEEE
Q 009759          169 GAKLIGSRS---FPCP--WYQ-----KVPLSLALSPRIISEVAR--FKPDIIHASSPGIMVFGALIIAKLLC---VPIVM  233 (526)
Q Consensus       169 ~~~~~~~~~---~~~~--~~~-----~~~~~~~~~~~l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~~~~~---~p~v~  233 (526)
                      ++.++.+..   +..+  .+.     .......+.....+++++  .+|||||+|++..... +.+++...+   +|+|+
T Consensus        81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~-~~~l~~~~~~~~~~~v~  159 (473)
T TIGR02095        81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALV-PALLKAVYRPNPIKTVF  159 (473)
T ss_pred             CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHH-HHHHHhhccCCCCCEEE
Confidence            111111100   0000  111     000011223344445543  6899999999765544 344444444   99999


Q ss_pred             EEecCCccc-cccccccc-------cc-c-----hHHHHHHHHhhcCcEEEeCChhHHHHHHHh-cc--------cCCCc
Q 009759          234 SYHTHVPVY-IPRYTFSW-------LV-K-----PMWLVIKFLHRAADLTLVPSVAIGKDLEAA-RV--------TAANK  290 (526)
Q Consensus       234 ~~h~~~~~~-~~~~~~~~-------~~-~-----~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~-~~--------~~~~k  290 (526)
                      ++|+..... .+......       .. .     ....+.+..+..+|.++++|+.+++++... ++        .+..+
T Consensus       160 TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~k  239 (473)
T TIGR02095       160 TIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGK  239 (473)
T ss_pred             EcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCC
Confidence            999865221 11100000       00 0     012456778899999999999999988653 11        13569


Q ss_pred             EEEeecCCCCCCCCCCcc------------------cHHHHHhhcCCC-CCCcEEEEEecccccccHHHHHHHHHhC--C
Q 009759          291 IRIWKKGVDSESFHPRFR------------------SSEMRWRLSNGE-PDKPLIVHVGRLGVEKSLDFLKRVMDRL--P  349 (526)
Q Consensus       291 i~vi~ngid~~~~~~~~~------------------~~~~~~~~~~~~-~~~~~i~~vG~l~~~Kg~~~li~a~~~l--~  349 (526)
                      +.+|+||+|.+.|.|..+                  +..++.++++.. ++.++|+|+||+.++||++.+++++..+  .
T Consensus       240 i~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~  319 (473)
T TIGR02095       240 LRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL  319 (473)
T ss_pred             eEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc
Confidence            999999999999987532                  234566666532 3688999999999999999999999887  3


Q ss_pred             CcEEEEEeCCc--cHHHHHHHhcCC--CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC
Q 009759          350 EARIAFIGDGP--YREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG  425 (526)
Q Consensus       350 ~~~l~ivG~g~--~~~~l~~l~~~~--~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg  425 (526)
                      +++|+|+|+|+  +.+.++++..+.  ++.+.+.++.+++..+|++||++|+||.+|+||++++|||+||+|||++++||
T Consensus       320 ~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg  399 (473)
T TIGR02095       320 GGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG  399 (473)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCC
Confidence            69999999984  556777776544  58888888888899999999999999999999999999999999999999999


Q ss_pred             CCceecccCCC------ceeEeeCCCCHHHHHHHHHHhhh----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 009759          426 IPDIIPEDQDG------KIGYLFNPGDLDDCLSKLEPLLY----NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA  495 (526)
Q Consensus       426 ~~e~v~~~~~~------~~g~~~~~~d~~~la~ai~~ll~----d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~  495 (526)
                      +.|++   .++      .+|+++++.|+++++++|.+++.    +++.++++++++.+  ++|||++++++++ ++|+++
T Consensus       400 ~~e~v---~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~-~~Y~~l  473 (473)
T TIGR02095       400 LADTV---VDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYV-ELYRSL  473 (473)
T ss_pred             ccceE---ecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHH-HHHHhC
Confidence            99999   776      89999999999999999999988    89999999887753  5899999999997 899863

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=100.00  E-value=8.3e-42  Score=347.70  Aligned_cols=358  Identities=25%  Similarity=0.318  Sum_probs=271.7

Q ss_pred             cCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-----cccCceeccccccCCCcccc--ccch-hcccHHHH-HHHHh-
Q 009759          133 VSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-----EFYGAKLIGSRSFPCPWYQK--VPLS-LALSPRII-SEVAR-  202 (526)
Q Consensus       133 ~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~-~~l~~-  202 (526)
                      .||.+.++.+|+++|.++||+|+|++.......     ...++.+..+...+......  .... ..+...+. .++++ 
T Consensus        19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (405)
T TIGR03449        19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARHE   98 (405)
T ss_pred             CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence            599999999999999999999999997543211     11233333322111111100  0000 01111222 33333 


Q ss_pred             -cCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccc--cccccchHHHHHHHHhhcCcEEEeCChhHHHH
Q 009759          203 -FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYT--FSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD  279 (526)
Q Consensus       203 -~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~  279 (526)
                       .+||+||+|.+.. .+.+..+++..++|+|++.|+..........  ........+..++.+++.+|.++++|+...+.
T Consensus        99 ~~~~Diih~h~~~~-~~~~~~~~~~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~  177 (405)
T TIGR03449        99 PGYYDLIHSHYWLS-GQVGWLLRDRWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARD  177 (405)
T ss_pred             CCCCCeEEechHHH-HHHHHHHHHhcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHH
Confidence             4799999998533 3445566778899999999986432111000  00111123345677889999999999998888


Q ss_pred             HHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CC--cEE
Q 009759          280 LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PE--ARI  353 (526)
Q Consensus       280 l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~--~~l  353 (526)
                      +...++.+.+++.+|+||+|.+.+.+. .....+.+++. ..++++|+|+|++.+.||++.++++++.+    ++  ++|
T Consensus       178 ~~~~~~~~~~ki~vi~ngvd~~~~~~~-~~~~~~~~~~~-~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l  255 (405)
T TIGR03449       178 LVRHYDADPDRIDVVAPGADLERFRPG-DRATERARLGL-PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRV  255 (405)
T ss_pred             HHHHcCCChhhEEEECCCcCHHHcCCC-cHHHHHHhcCC-CCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEE
Confidence            877666567899999999999888655 33444555544 45678999999999999999999999876    55  899


Q ss_pred             EEEeC----C-ccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          354 AFIGD----G-PYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       354 ~ivG~----g-~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      +++|.    | +..++++++++..    +|.++|+++.+++.++|+.||++++||..|++|++++|||++|+|||+++.|
T Consensus       256 ~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~  335 (405)
T TIGR03449       256 IVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVG  335 (405)
T ss_pred             EEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCC
Confidence            99995    3 4456677766543    6999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 009759          425 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  497 (526)
Q Consensus       425 g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~  497 (526)
                      +..|++   .++.+|++++++|+++++++|.+++++++.++++++++++.+++|+|+.++++++ ++|.+++.
T Consensus       336 ~~~e~i---~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~fsw~~~~~~~~-~~y~~~~~  404 (405)
T TIGR03449       336 GLPVAV---ADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHAAGFSWAATADGLL-SSYRDALA  404 (405)
T ss_pred             CcHhhh---ccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHhh
Confidence            999999   8899999999999999999999999999999999999999888999999999997 89988763

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.9e-41  Score=341.11  Aligned_cols=357  Identities=23%  Similarity=0.382  Sum_probs=276.0

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc--cccCceeccccccCCCccccccchhcccHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ--EFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      |||++++.    +..||.+.++.+++++|.++||+|++++.......  ...+...........+..............+
T Consensus         1 mki~~~~~----p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   76 (371)
T cd04962           1 MKIGIVCY----PTYGGSGVVATELGKALARRGHEVHFITSSRPFRLDEYSPNIFFHEVEVPQYPLFQYPPYDLALASKI   76 (371)
T ss_pred             CceeEEEE----eCCCCccchHHHHHHHHHhcCCceEEEecCCCcchhhhccCeEEEEecccccchhhcchhHHHHHHHH
Confidence            79999974    56799999999999999999999999987543211  1112121111111111111112223344677


Q ss_pred             HHHHHhcCCCEEEECCCchHHHHHHHHHHh---cCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCC
Q 009759          197 ISEVARFKPDIIHASSPGIMVFGALIIAKL---LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS  273 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~---~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S  273 (526)
                      .+.+++.+||+||+|.+........+..+.   .++|+++++|+........      ....+.+.+..++.+|.++++|
T Consensus        77 ~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~------~~~~~~~~~~~~~~~d~ii~~s  150 (371)
T cd04962          77 AEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVGQ------DPSFQPATRFSIEKSDGVTAVS  150 (371)
T ss_pred             HHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccccccc------cccchHHHHHHHhhCCEEEEcC
Confidence            888889999999999754333333333222   3899999999753221111      1122345677889999999999


Q ss_pred             hhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC---CC
Q 009759          274 VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---PE  350 (526)
Q Consensus       274 ~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l---~~  350 (526)
                      +..++.+.+.+. ...++.+++||+|...+.+.. ....+.+.+. .+++++++++|++.+.||++.++++++.+   .+
T Consensus       151 ~~~~~~~~~~~~-~~~~i~vi~n~~~~~~~~~~~-~~~~~~~~~~-~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~~~  227 (371)
T cd04962         151 ESLRQETYELFD-ITKEIEVIPNFVDEDRFRPKP-DEALKRRLGA-PEGEKVLIHISNFRPVKRIDDVIRIFAKVRKEVP  227 (371)
T ss_pred             HHHHHHHHHhcC-CcCCEEEecCCcCHhhcCCCc-hHHHHHhcCC-CCCCeEEEEecccccccCHHHHHHHHHHHHhcCC
Confidence            999999887764 467899999999988765542 2333334433 45678899999999999999999999876   36


Q ss_pred             cEEEEEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC
Q 009759          351 ARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI  426 (526)
Q Consensus       351 ~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~  426 (526)
                      ++++++|.|+..+.+++++.+.    +|.+.|+.  +++.++|+.||++|+||..|++|++++|||++|+|||+++.|+.
T Consensus       228 ~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~  305 (371)
T cd04962         228 ARLLLVGDGPERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGI  305 (371)
T ss_pred             ceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCc
Confidence            8999999998888887776643    59999987  58999999999999999999999999999999999999999999


Q ss_pred             CceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q 009759          427 PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       427 ~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~  494 (526)
                      .|++   .++.+|++++++|+++++++|.++++|++.+.+|++++++.+ ++|+|+.+++++. ++|++
T Consensus       306 ~e~i---~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~-~~y~~  370 (371)
T cd04962         306 PEVV---KHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVPQYE-ALYRR  370 (371)
T ss_pred             hhhh---cCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHh
Confidence            9999   889999999999999999999999999999999999999996 6899999999997 88875

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.5e-41  Score=336.74  Aligned_cols=360  Identities=40%  Similarity=0.649  Sum_probs=290.4

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      ||+++++.++ +..||.+.++..++++|.++||+|++++........... ....+.....+..............+.+.
T Consensus         1 kIl~i~~~~~-p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (364)
T cd03814           1 RIAIVTDTFL-PQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-RVVPVPSVPLPGYPEIRLALPPRRRVRRL   78 (364)
T ss_pred             CeEEEecccC-ccccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-CceeecccccCcccceEecccchhhHHHH
Confidence            6899998776 666999999999999999999999999986543222111 12222222333333333444455677788


Q ss_pred             HHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHH
Q 009759          200 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD  279 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~  279 (526)
                      +++.+||+||++.+....+.+..+++..++|+++++|+.++.+.............+...+.+++.+|.+++.|+.+.+.
T Consensus        79 ~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~  158 (364)
T cd03814          79 LDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADE  158 (364)
T ss_pred             HHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHH
Confidence            88899999999987666666677778899999999999876544433333333333567788899999999999999986


Q ss_pred             HHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCC---CcEEEEE
Q 009759          280 LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP---EARIAFI  356 (526)
Q Consensus       280 l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~---~~~l~iv  356 (526)
                      +...+   ..++.+++||+|.+.+.+.......+.++.  ..+.+.++|+|++...||++.++++++.+.   +++|+++
T Consensus       159 ~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~  233 (364)
T cd03814         159 LRARG---FRRVRLWPRGVDTELFHPRRRDEALRARLG--PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIV  233 (364)
T ss_pred             HhccC---CCceeecCCCccccccCcccccHHHHHHhC--CCCCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEE
Confidence            65543   368899999999998876544444444442  456778999999999999999999999884   6999999


Q ss_pred             eCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCC
Q 009759          357 GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG  436 (526)
Q Consensus       357 G~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~  436 (526)
                      |.|+..+.++  ....+|.+.|+++.+++.++|+.||++|+|+..|++|++++|||+||+|||+++.++..+++   +++
T Consensus       234 G~~~~~~~~~--~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i---~~~  308 (364)
T cd03814         234 GDGPARARLE--ARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIV---TDG  308 (364)
T ss_pred             eCCchHHHHh--ccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhh---cCC
Confidence            9988777665  22348999999999999999999999999999999999999999999999999999999999   888


Q ss_pred             ceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009759          437 KIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       437 ~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly  492 (526)
                      .+|+++++.|.++++++|.+++.|++.++++++++++.+++|+|+.++++++ ++|
T Consensus       309 ~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  363 (364)
T cd03814         309 ENGLLVEPGDAEAFAAALAALLADPELRRRMAARARAEAERRSWEAFLDNLL-EAY  363 (364)
T ss_pred             cceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhcCHHHHHHHHH-Hhh
Confidence            9999999999999999999999999999999999999998999999999997 665

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=100.00  E-value=1.2e-40  Score=336.31  Aligned_cols=351  Identities=23%  Similarity=0.280  Sum_probs=265.9

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccC-ce--ec--cccccCCC------------
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYG-AK--LI--GSRSFPCP------------  181 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~-~~--~~--~~~~~~~~------------  181 (526)
                      |||++++..+|    .-.+..+.+-+.+|.++||+|.+++........... ..  ..  .+...+..            
T Consensus         1 m~ia~~~~~~P----~~setFi~~ei~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (406)
T PRK15427          1 MKVGFFLLKFP----LSSETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLRHRA   76 (406)
T ss_pred             CeEEEEeccCC----ccchhhHHHHHHHHHHcCceEEEEEccCCCccccccchhhhccccceeecCcCccchHHHHhhhh
Confidence            89999999877    455889999999999999999999865432211100 00  00  00000000            


Q ss_pred             ------ccccc-cch------------hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHH--hcCCCEEEEEecCCc
Q 009759          182 ------WYQKV-PLS------------LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAK--LLCVPIVMSYHTHVP  240 (526)
Q Consensus       182 ------~~~~~-~~~------------~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~--~~~~p~v~~~h~~~~  240 (526)
                            +.... ...            +.....+.+.+++.++|+||+|....... +..++.  ..+.++++++|+...
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~-~~~~~~~~~~~~~~~~t~Hg~d~  155 (406)
T PRK15427         77 SQTLRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVT-AAKLRELGVLRGKIATIFHGIDI  155 (406)
T ss_pred             hhHhhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHH-HHHHHHhCCCCCCeEEEEccccc
Confidence                  00000 000            00011223445677899999998644333 333333  345577889997532


Q ss_pred             ccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCC
Q 009759          241 VYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGE  320 (526)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~  320 (526)
                      .. ..     .........+..++.+|.++++|+..++.+.+.+ .+.+++.+++||+|.+.|.+....         ..
T Consensus       156 ~~-~~-----~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~~g-~~~~ki~vi~nGvd~~~f~~~~~~---------~~  219 (406)
T PRK15427        156 SS-RE-----VLNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMG-CPPEKIAVSRMGVDMTRFSPRPVK---------AP  219 (406)
T ss_pred             cc-ch-----hhhhhhHHHHHHHHhCCEEEECCHHHHHHHHHcC-CCHHHEEEcCCCCCHHHcCCCccc---------cC
Confidence            11 00     0111123456678899999999999999998764 467899999999999888653211         12


Q ss_pred             CCCcEEEEEecccccccHHHHHHHHHhC----CCcEEEEEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcC
Q 009759          321 PDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASG  392 (526)
Q Consensus       321 ~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~a  392 (526)
                      .+...|+|+||+.+.||++.++++++.+    ++++++|+|+|+..+++++++++.    +|.+.|+++++++.++|+.|
T Consensus       220 ~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~a  299 (406)
T PRK15427        220 ATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDA  299 (406)
T ss_pred             CCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhC
Confidence            3556799999999999999999999876    479999999999888888887754    59999999999999999999


Q ss_pred             cEEEecCCC------CCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHH
Q 009759          393 DVFVMPSES------ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRE  465 (526)
Q Consensus       393 Dv~v~ps~~------e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~  465 (526)
                      |++|+||..      ||+|++++|||++|+|||+|+.||..|++   +++.+|++++++|+++++++|.++++ |++.++
T Consensus       300 Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v---~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~  376 (406)
T PRK15427        300 DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELV---EADKSGWLVPENDAQALAQRLAAFSQLDTDELA  376 (406)
T ss_pred             CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhh---cCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHH
Confidence            999999974      99999999999999999999999999999   89999999999999999999999999 999999


Q ss_pred             HHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q 009759          466 TMGQAARQEM-EKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       466 ~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~  494 (526)
                      +|++++++.+ ++|+|+.+++++. ++|++
T Consensus       377 ~~~~~ar~~v~~~f~~~~~~~~l~-~~~~~  405 (406)
T PRK15427        377 PVVKRAREKVETDFNQQVINRELA-SLLQA  405 (406)
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHH-HHHhh
Confidence            9999999999 5899999999997 78765

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=9.2e-41  Score=336.39  Aligned_cols=358  Identities=23%  Similarity=0.298  Sum_probs=270.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      .||+++...   ...||+++++.+++++|.+.||++.+++....... .......++..+..+...  ...+.....+.+
T Consensus         2 ~~il~ii~~---~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~i~~~~~~~~~--~~~~~~~~~l~~   75 (374)
T TIGR03088         2 PLIVHVVYR---FDVGGLENGLVNLINHLPADRYRHAVVALTEVSAF-RKRIQRPDVAFYALHKQP--GKDVAVYPQLYR   75 (374)
T ss_pred             ceEEEEeCC---CCCCcHHHHHHHHHhhccccccceEEEEcCCCChh-HHHHHhcCceEEEeCCCC--CCChHHHHHHHH
Confidence            489999875   45699999999999999999999988875432210 000011111111111111  112344567888


Q ss_pred             HHHhcCCCEEEECCCchHHHHHHHHHHhcCCCE-EEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHH
Q 009759          199 EVARFKPDIIHASSPGIMVFGALIIAKLLCVPI-VMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIG  277 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~-v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~  277 (526)
                      ++++.+||+||+|+...  ..+.+.++..++|. +++.|........  ...   .....+.+...+.+|.++++|+..+
T Consensus        76 ~l~~~~~Divh~~~~~~--~~~~~~~~~~~~~~~i~~~h~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~i~vs~~~~  148 (374)
T TIGR03088        76 LLRQLRPDIVHTRNLAA--LEAQLPAALAGVPARIHGEHGRDVFDLD--GSN---WKYRWLRRLYRPLIHHYVAVSRDLE  148 (374)
T ss_pred             HHHHhCCCEEEEcchhH--HHHHHHHHhcCCCeEEEeecCcccccch--hhH---HHHHHHHHHHHhcCCeEEEeCHHHH
Confidence            99999999999997532  22344556667775 3334432111000  001   1122345556678999999999999


Q ss_pred             HHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----C----
Q 009759          278 KDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P----  349 (526)
Q Consensus       278 ~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~----  349 (526)
                      +.+.+.++.+.+++.+|+||+|.+.+.+.........+......+.++++++||+.+.||++.++++++.+    +    
T Consensus       149 ~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~  228 (374)
T TIGR03088       149 DWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAE  228 (374)
T ss_pred             HHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCccccc
Confidence            99988776677899999999999888654322211111222345678999999999999999999998765    2    


Q ss_pred             CcEEEEEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC
Q 009759          350 EARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG  425 (526)
Q Consensus       350 ~~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg  425 (526)
                      +++|+++|+|+..+.+++.++..    ++.+.|..  +|+.++|+.||++|+||..||+|++++|||+||+|||+++.||
T Consensus       229 ~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g  306 (374)
T TIGR03088       229 RLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGER--DDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGG  306 (374)
T ss_pred             ceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCc--CCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCC
Confidence            68999999998888888877654    47888865  7899999999999999999999999999999999999999999


Q ss_pred             CCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHH
Q 009759          426 IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAA  495 (526)
Q Consensus       426 ~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~~  495 (526)
                      ..|++   +++.+|++++++|+++++++|.+++++++.+.++++++++.+ ++|+|+.+++++. ++|+++
T Consensus       307 ~~e~i---~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~-~~y~~~  373 (374)
T TIGR03088       307 NPELV---QHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYA-GLYDQL  373 (374)
T ss_pred             cHHHh---cCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHh
Confidence            99999   889999999999999999999999999999999999999998 6899999999997 899876

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=100.00  E-value=2e-40  Score=339.12  Aligned_cols=356  Identities=20%  Similarity=0.266  Sum_probs=255.3

Q ss_pred             CCccCchHHHHHHHHHHHHHCCC--eEEEEEeCCCCC-------cc----ccCceeccccccCCCcccc---ccchhccc
Q 009759          130 FSYVSGYKNRFQNFIKYLREMGD--EVMVVTTHEGVP-------QE----FYGAKLIGSRSFPCPWYQK---VPLSLALS  193 (526)
Q Consensus       130 ~~~~gG~~~~~~~l~~~L~~~G~--~V~vi~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~  193 (526)
                      .|..||.+.++.+|+++|.++||  +|+|++......       ..    ..++.+.++...+......   ......+.
T Consensus        22 ~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~~  101 (439)
T TIGR02472        22 DADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGPRRYLRKELLWPYLDELA  101 (439)
T ss_pred             CCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCCCCCcChhhhhhhHHHHH
Confidence            37789999999999999999997  999999542210       00    1223333332211111000   00111233


Q ss_pred             HHHHHHHHhc--CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccc-----ccccc---c--hHHHHHHH
Q 009759          194 PRIISEVARF--KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYT-----FSWLV---K--PMWLVIKF  261 (526)
Q Consensus       194 ~~l~~~l~~~--~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~-----~~~~~---~--~~~~~~~~  261 (526)
                      ..+.+.+++.  +|||||+|.+. ..+.+.++++..++|+|++.|+..........     .....   .  .....++.
T Consensus       102 ~~l~~~~~~~~~~~DvIH~h~~~-~~~~~~~~~~~~~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (439)
T TIGR02472       102 DNLLQHLRQQGHLPDLIHAHYAD-AGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEE  180 (439)
T ss_pred             HHHHHHHHHcCCCCCEEEEcchh-HHHHHHHHHHHhCCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHH
Confidence            4566677653  79999999864 34556667788899999999975321110000     00000   0  01124677


Q ss_pred             HhhcCcEEEeCChhHHH-HHHHhcccCCCcEEEeecCCCCCCCCCCcccH---HHH---HhhcCCCCCCcEEEEEecccc
Q 009759          262 LHRAADLTLVPSVAIGK-DLEAARVTAANKIRIWKKGVDSESFHPRFRSS---EMR---WRLSNGEPDKPLIVHVGRLGV  334 (526)
Q Consensus       262 ~~~~ad~ii~~S~~~~~-~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~---~~~---~~~~~~~~~~~~i~~vG~l~~  334 (526)
                      .++.+|.++++|..... .+....+.+.+++.+||||+|.+.|.+.....   ..+   .+.. ..++.++|+|+||+.+
T Consensus       181 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~vGrl~~  259 (439)
T TIGR02472       181 TLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFL-KDPEKPPILAISRPDR  259 (439)
T ss_pred             HHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhc-cccCCcEEEEEcCCcc
Confidence            89999999999976543 34444445678999999999999887643211   111   1122 2456779999999999


Q ss_pred             cccHHHHHHHHHhCC----CcEEE-EEeCCccHHH-----------HHHHhcC----CCeEEecccChhhHHHHHHcC--
Q 009759          335 EKSLDFLKRVMDRLP----EARIA-FIGDGPYREE-----------LEKMFTG----MPAVFTGMLLGEELSQAYASG--  392 (526)
Q Consensus       335 ~Kg~~~li~a~~~l~----~~~l~-ivG~g~~~~~-----------l~~l~~~----~~V~~~g~v~~~~l~~~~~~a--  392 (526)
                      .||++.+++|++.++    +.+++ ++|+|+..+.           +..++++    .+|.|.|+++.+++.++|+.|  
T Consensus       260 ~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~  339 (439)
T TIGR02472       260 RKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAAR  339 (439)
T ss_pred             cCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhh
Confidence            999999999998642    24444 5677654221           2233332    259999999999999999987  


Q ss_pred             --cEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHH
Q 009759          393 --DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQA  470 (526)
Q Consensus       393 --Dv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~  470 (526)
                        |++|+||..|+||++++||||||+|||+|+.||..|++   .++.+|++++++|+++++++|.++++|++.+++++++
T Consensus       340 ~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv---~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~  416 (439)
T TIGR02472       340 SRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDII---ANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRN  416 (439)
T ss_pred             cCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHh---cCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Confidence              99999999999999999999999999999999999999   8899999999999999999999999999999999999


Q ss_pred             HHHHH-HhCCHHHHHHHHHHHH
Q 009759          471 ARQEM-EKYDWRAATRTIRNEQ  491 (526)
Q Consensus       471 a~~~~-~~fs~~~~~~~~~~~l  491 (526)
                      +++.+ ++|||+.++++++ ++
T Consensus       417 a~~~~~~~fsw~~~~~~~~-~l  437 (439)
T TIGR02472       417 GIEGVRRHYSWDAHVEKYL-RI  437 (439)
T ss_pred             HHHHHHHhCCHHHHHHHHH-HH
Confidence            99998 6899999999997 44

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=100.00  E-value=2.4e-40  Score=335.25  Aligned_cols=367  Identities=23%  Similarity=0.360  Sum_probs=273.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhc-ccHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLA-LSPRII  197 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~  197 (526)
                      |||++++..+|....||.+.++.+++++|.+. ++|.|++..... ....++.+.+......  .......+. ....+.
T Consensus         1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~   76 (388)
T TIGR02149         1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVRCFGDQR-FDSEGLTVKGYRPWSE--LKEANKALGTFSVDLA   76 (388)
T ss_pred             CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEEcCCCch-hcCCCeEEEEecChhh--ccchhhhhhhhhHHHH
Confidence            89999998877334599999999999999987 777777765432 1122223322211100  000000000 011111


Q ss_pred             HHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccccccc-ccccccchHHHHHHHHhhcCcEEEeCChhH
Q 009759          198 SEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRY-TFSWLVKPMWLVIKFLHRAADLTLVPSVAI  276 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~  276 (526)
                      ......++|+||+|.+... +.+.++++..++|+|++.|+..+...... ...........+++..++.+|.++++|+.+
T Consensus        77 ~~~~~~~~divh~~~~~~~-~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~  155 (388)
T TIGR02149        77 MANDPVDADVVHSHTWYTF-LAGHLAKKLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGM  155 (388)
T ss_pred             HhhCCCCCCeEeecchhhh-hHHHHHHHhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHH
Confidence            1122347999999985433 33455567789999999999754321110 001111233456788899999999999999


Q ss_pred             HHHHHHhc-ccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC-CCcEEE
Q 009759          277 GKDLEAAR-VTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-PEARIA  354 (526)
Q Consensus       277 ~~~l~~~~-~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l-~~~~l~  354 (526)
                      ++.+.+.+ +.+..++.+++||+|.+.+.+. .....+.+++. .++.++++|+||+.+.||++.++++++.+ ++++++
T Consensus       156 ~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~-~~~~~~~~~~~-~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~~~~l~  233 (388)
T TIGR02149       156 REDILKYYPDLDPEKVHVIYNGIDTKEYKPD-DGNVVLDRYGI-DRSRPYILFVGRITRQKGVPHLLDAVHYIPKDVQVV  233 (388)
T ss_pred             HHHHHHHcCCCCcceEEEecCCCChhhcCCC-chHHHHHHhCC-CCCceEEEEEcccccccCHHHHHHHHHHHhhcCcEE
Confidence            99988775 4456789999999999888664 33445555554 45677899999999999999999999988 478999


Q ss_pred             EEeCCccH----HHHHHHhcCC-----CeEEe-cccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          355 FIGDGPYR----EELEKMFTGM-----PAVFT-GMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       355 ivG~g~~~----~~l~~l~~~~-----~V~~~-g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      ++|+|+..    +.+++...+.     +|.+. |.++.+++..+|+.||++|+||..|++|++++|||++|+|||+++.|
T Consensus       234 i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~  313 (388)
T TIGR02149       234 LCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATG  313 (388)
T ss_pred             EEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCC
Confidence            98876543    3444443322     36654 67999999999999999999999999999999999999999999999


Q ss_pred             CCCceecccCCCceeEeeCCCCH------HHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHH
Q 009759          425 GIPDIIPEDQDGKIGYLFNPGDL------DDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAI  496 (526)
Q Consensus       425 g~~e~v~~~~~~~~g~~~~~~d~------~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~~l  496 (526)
                      +..|++   +++.+|++++.+|.      ++++++|.++++|++.++++++++++.+ ++|||+.+++++. ++|++++
T Consensus       314 ~~~e~i---~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~-~~y~~~~  388 (388)
T TIGR02149       314 GIPEVV---VDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTV-EMYRKVL  388 (388)
T ss_pred             CHHHHh---hCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHhhC
Confidence            999999   88899999999888      9999999999999999999999999998 6899999999997 8998763

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=100.00  E-value=4.3e-40  Score=349.53  Aligned_cols=378  Identities=17%  Similarity=0.216  Sum_probs=275.6

Q ss_pred             CCCCCCcEEEEEeccCC----------CCccCchHHHHHHHHHHHHHCC--CeEEEEEeCCCCCc-------c-------
Q 009759          113 ENNSRPRRIALFVEPSP----------FSYVSGYKNRFQNFIKYLREMG--DEVMVVTTHEGVPQ-------E-------  166 (526)
Q Consensus       113 ~~~~~~mkIliv~~~~p----------~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~-------~-------  166 (526)
                      +...++|.|++|+-+.-          -++.||...++.+|+++|+++|  |+|.++|.......       .       
T Consensus       164 ~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~  243 (1050)
T TIGR02468       164 QQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPR  243 (1050)
T ss_pred             hcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccccc
Confidence            44677899999955432          1456788899999999999998  89999996543211       0       


Q ss_pred             -----------ccCceeccccccCCC-ccccc---cchhcccHHHHHHHHh--------------cCCCEEEECCCchHH
Q 009759          167 -----------FYGAKLIGSRSFPCP-WYQKV---PLSLALSPRIISEVAR--------------FKPDIIHASSPGIMV  217 (526)
Q Consensus       167 -----------~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~l~~~l~~--------------~~pDiV~~~~~~~~~  217 (526)
                                 ..+..+++++.-+.. +..+-   +....+...+.+.+.+              ..||+||+|++. .+
T Consensus       244 ~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~-sG  322 (1050)
T TIGR02468       244 SSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYAD-AG  322 (1050)
T ss_pred             ccccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcch-HH
Confidence                       012333333322221 11111   1111222233333321              149999999864 55


Q ss_pred             HHHHHHHHhcCCCEEEEEecCCcccccc---cc---cc-----cccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhccc
Q 009759          218 FGALIIAKLLCVPIVMSYHTHVPVYIPR---YT---FS-----WLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVT  286 (526)
Q Consensus       218 ~~~~~~~~~~~~p~v~~~h~~~~~~~~~---~~---~~-----~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~  286 (526)
                      ..+..+++..++|+|+|.|.........   ..   ..     +........++.++..||.||+.|..+.+++...|..
T Consensus       323 ~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~  402 (1050)
T TIGR02468       323 DSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDG  402 (1050)
T ss_pred             HHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhcc
Confidence            6677888999999999999753221110   00   00     0111223467889999999999999999876555421


Q ss_pred             ----------------------CCCcEEEeecCCCCCCCCCCcccH--------------------HHHHhhcCCCCCCc
Q 009759          287 ----------------------AANKIRIWKKGVDSESFHPRFRSS--------------------EMRWRLSNGEPDKP  324 (526)
Q Consensus       287 ----------------------~~~ki~vi~ngid~~~~~~~~~~~--------------------~~~~~~~~~~~~~~  324 (526)
                                            ...++.|||||+|.+.|.|.....                    .++ ++ +..++++
T Consensus       403 ~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~-r~-~~~pdkp  480 (1050)
T TIGR02468       403 FDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIM-RF-FTNPRKP  480 (1050)
T ss_pred             CCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHH-hh-cccCCCc
Confidence                                  123899999999999998742211                    111 11 1256778


Q ss_pred             EEEEEecccccccHHHHHHHHHhCC------CcEEEEEeCCccH-----------HHHHHHhcCC----CeEEecccChh
Q 009759          325 LIVHVGRLGVEKSLDFLKRVMDRLP------EARIAFIGDGPYR-----------EELEKMFTGM----PAVFTGMLLGE  383 (526)
Q Consensus       325 ~i~~vG~l~~~Kg~~~li~a~~~l~------~~~l~ivG~g~~~-----------~~l~~l~~~~----~V~~~g~v~~~  383 (526)
                      +|+|+||+.+.||++.|++|+..++      ++. +|+|.++..           ..+..++++.    +|.|.|+++.+
T Consensus       481 vIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~e  559 (1050)
T TIGR02468       481 MILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQS  559 (1050)
T ss_pred             EEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHH
Confidence            9999999999999999999998873      344 466865432           3344555543    59999999999


Q ss_pred             hHHHHHHcC----cEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh
Q 009759          384 ELSQAYASG----DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  459 (526)
Q Consensus       384 ~l~~~~~~a----Dv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~  459 (526)
                      ++..+|+.|    |++|+||.+|+||++++||||||+|||+|+.||..|++   .++.+|+++++.|+++|+++|.++++
T Consensus       560 dvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII---~~g~nGlLVdP~D~eaLA~AL~~LL~  636 (1050)
T TIGR02468       560 DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIH---RVLDNGLLVDPHDQQAIADALLKLVA  636 (1050)
T ss_pred             HHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHh---ccCCcEEEECCCCHHHHHHHHHHHhh
Confidence            999999988    69999999999999999999999999999999999999   89999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Q 009759          460 NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWF  498 (526)
Q Consensus       460 d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~~  498 (526)
                      |++.+++|++++++.+++|+|+.++++++ ..|..+..+
T Consensus       637 Dpelr~~m~~~gr~~v~~FSWe~ia~~yl-~~i~~~~~~  674 (1050)
T TIGR02468       637 DKQLWAECRQNGLKNIHLFSWPEHCKTYL-SRIASCRPR  674 (1050)
T ss_pred             CHHHHHHHHHHHHHHHHHCCHHHHHHHHH-HHHHHHhcc
Confidence            99999999999999998899999999998 677776543

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.6e-40  Score=340.45  Aligned_cols=368  Identities=21%  Similarity=0.283  Sum_probs=267.5

Q ss_pred             EEEEEecc-CCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc--cCc----------------------eecc
Q 009759          120 RIALFVEP-SPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF--YGA----------------------KLIG  174 (526)
Q Consensus       120 kIliv~~~-~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~--~~~----------------------~~~~  174 (526)
                      ||++++.. .|+...||.+.++..|+++|+++||+|.|+++.++.....  ...                      ...+
T Consensus         1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   80 (476)
T cd03791           1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG   80 (476)
T ss_pred             CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence            68899644 6888999999999999999999999999999876532210  000                      0001


Q ss_pred             cccc--CCCcc-cc--------c------cchhcccHHHHHHHHh--cCCCEEEECCCchHHHHHHHHHHh-----cCCC
Q 009759          175 SRSF--PCPWY-QK--------V------PLSLALSPRIISEVAR--FKPDIIHASSPGIMVFGALIIAKL-----LCVP  230 (526)
Q Consensus       175 ~~~~--~~~~~-~~--------~------~~~~~~~~~l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~~~-----~~~p  230 (526)
                      +..+  ..+.+ .+        .      .....+.....+++++  .+|||||+|+++......++....     .++|
T Consensus        81 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~  160 (476)
T cd03791          81 VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIK  160 (476)
T ss_pred             ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCC
Confidence            1111  00000 00        0      0001122344455554  799999999987554443333322     4899


Q ss_pred             EEEEEecCCcccccccc------cc---------cccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh---------ccc
Q 009759          231 IVMSYHTHVPVYIPRYT------FS---------WLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA---------RVT  286 (526)
Q Consensus       231 ~v~~~h~~~~~~~~~~~------~~---------~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~---------~~~  286 (526)
                      +|+++|+..........      ..         ........+++..+..+|.++++|+.+++.+.+.         ...
T Consensus       161 ~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~  240 (476)
T cd03791         161 TVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRA  240 (476)
T ss_pred             EEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHh
Confidence            99999996533211100      00         0001122567888999999999999999988642         122


Q ss_pred             CCCcEEEeecCCCCCCCCCCccc------------------HHHHHhhcCC-CCCCcEEEEEecccccccHHHHHHHHHh
Q 009759          287 AANKIRIWKKGVDSESFHPRFRS------------------SEMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKRVMDR  347 (526)
Q Consensus       287 ~~~ki~vi~ngid~~~~~~~~~~------------------~~~~~~~~~~-~~~~~~i~~vG~l~~~Kg~~~li~a~~~  347 (526)
                      ...++.+|+||+|.+.|.+....                  ..++.+++.. .++.++|+|+||+.++||++.++++++.
T Consensus       241 ~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~  320 (476)
T cd03791         241 RAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPE  320 (476)
T ss_pred             ccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHH
Confidence            45799999999999999875432                  2345555543 4678999999999999999999999988


Q ss_pred             C--CCcEEEEEeCCcc--HHHHHHHhcC--CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          348 L--PEARIAFIGDGPY--REELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       348 l--~~~~l~ivG~g~~--~~~l~~l~~~--~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                      +  .+++|+++|+|+.  .+.++++..+  .++.+.+..+.+++..+|+.||++|+||.+|+||++++|||+||+|||++
T Consensus       321 l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~  400 (476)
T cd03791         321 LLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVR  400 (476)
T ss_pred             HHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEEC
Confidence            7  3589999998853  4566666654  36877766677788899999999999999999999999999999999999


Q ss_pred             CCCCCCceecccCCCc------eeEeeCCCCHHHHHHHHHHhhh---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009759          422 RAGGIPDIIPEDQDGK------IGYLFNPGDLDDCLSKLEPLLY---NQELRETMGQAARQEMEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       422 ~~gg~~e~v~~~~~~~------~g~~~~~~d~~~la~ai~~ll~---d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly  492 (526)
                      ++||+.|++   .++.      +|+++++.|+++++++|.++++   +++.+.++++++.+  ++|||+.++++++ ++|
T Consensus       401 ~~gg~~e~v---~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~-~~y  474 (476)
T cd03791         401 ATGGLADTV---IDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYL-ELY  474 (476)
T ss_pred             cCCCccceE---eCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHH-HHH
Confidence            999999999   7766      9999999999999999999875   66777777766543  4799999999997 787


Q ss_pred             H
Q 009759          493 N  493 (526)
Q Consensus       493 ~  493 (526)
                      +
T Consensus       475 ~  475 (476)
T cd03791         475 R  475 (476)
T ss_pred             h
Confidence            5

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>PLN02846 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=2.4e-39  Score=322.81  Aligned_cols=350  Identities=15%  Similarity=0.170  Sum_probs=257.5

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCC-CeEEEEEeCCCCCc---------------c-------ccCcee
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMG-DEVMVVTTHEGVPQ---------------E-------FYGAKL  172 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G-~~V~vi~~~~~~~~---------------~-------~~~~~~  172 (526)
                      .++|||+|+++.++ |..+|.......++.+|+++| |+|+++.+......               +       +.+..+
T Consensus         2 ~~~mrIaivTdt~l-P~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v   80 (462)
T PLN02846          2 QKKQHIAIFTTASL-PWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERI   80 (462)
T ss_pred             CCCCEEEEEEcCCC-CCCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeE
Confidence            45699999999876 899999999999999999999 79999998653110               0       012344


Q ss_pred             ccccccCCCcccc-c---cchhcccHHHHHHHHhcCCCEEEECCCchHHHH--HHHHHHhcCCCEEEEEecCCccccccc
Q 009759          173 IGSRSFPCPWYQK-V---PLSLALSPRIISEVARFKPDIIHASSPGIMVFG--ALIIAKLLCVPIVMSYHTHVPVYIPRY  246 (526)
Q Consensus       173 ~~~~~~~~~~~~~-~---~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~--~~~~~~~~~~p~v~~~h~~~~~~~~~~  246 (526)
                      ..+..++++.+.. +   .........+.+.+++++|||||++++...++.  +..++++.++ +|.++|..+..+.+.+
T Consensus        81 ~r~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~-vV~tyHT~y~~Y~~~~  159 (462)
T PLN02846         81 SFLPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKFRL-VIGIVHTNYLEYVKRE  159 (462)
T ss_pred             EEecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcCCc-EEEEECCChHHHHHHh
Confidence            5666666666555 1   122224568999999999999999999877774  4455555555 8889999877665543


Q ss_pred             ccccccchHH-HHHHHHh-hcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCC--
Q 009759          247 TFSWLVKPMW-LVIKFLH-RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPD--  322 (526)
Q Consensus       247 ~~~~~~~~~~-~~~~~~~-~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~--  322 (526)
                      ...+...... .+.+++. ..+|.++++|....+ +.+       .+.+.++|||.+.|.+....  .+... . ..+  
T Consensus       160 ~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~-------~~i~~v~GVd~~~f~~~~~~--~~~~~-~-~~~~~  227 (462)
T PLN02846        160 KNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPR-------SIICNVHGVNPKFLEIGKLK--LEQQK-N-GEQAF  227 (462)
T ss_pred             ccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-Hhh-------CEEecCceechhhcCCCccc--Hhhhc-C-CCCCc
Confidence            3212122111 1222222 238999999986655 432       23445689999988766432  22211 1 223  


Q ss_pred             CcEEEEEecccccccHHHHHHHHHhC----CCcEEEEEeCCccHHHHHHHhcCCC--e-EEecccChhhHHHHHHcCcEE
Q 009759          323 KPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGMP--A-VFTGMLLGEELSQAYASGDVF  395 (526)
Q Consensus       323 ~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~ivG~g~~~~~l~~l~~~~~--V-~~~g~v~~~~l~~~~~~aDv~  395 (526)
                      .+.++|+||+..+||++.++++++.+    ++++|+|+|+|+.++++++++.+.+  + .+.|..   +..++|+.+|++
T Consensus       228 ~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~~---~~~~~~~~~DvF  304 (462)
T PLN02846        228 TKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGRD---HADPLFHDYKVF  304 (462)
T ss_pred             ceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCCC---CHHHHHHhCCEE
Confidence            34689999999999999999999865    6899999999999999999888654  2 456654   344799999999


Q ss_pred             EecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH
Q 009759          396 VMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  475 (526)
Q Consensus       396 v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~  475 (526)
                      |+||..|++|++++||||+|+|||+++.++ .+++   .++.+|++++  |.+++++++.+++.++.  ..++..+   .
T Consensus       305 v~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v---~~~~ng~~~~--~~~~~a~ai~~~l~~~~--~~~~~~a---~  373 (462)
T PLN02846        305 LNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFF---KQFPNCRTYD--DGKGFVRATLKALAEEP--APLTDAQ---R  373 (462)
T ss_pred             EECCCcccchHHHHHHHHcCCcEEEecCCC-ccee---ecCCceEecC--CHHHHHHHHHHHHccCc--hhHHHHH---H
Confidence            999999999999999999999999999997 5888   7899999885  89999999999998532  2222222   2


Q ss_pred             HhCCHHHHHHHHHHHHHHH
Q 009759          476 EKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       476 ~~fs~~~~~~~~~~~ly~~  494 (526)
                      ++|||+.++++++ .+|+-
T Consensus       374 ~~~SWe~~~~~l~-~~~~~  391 (462)
T PLN02846        374 HELSWEAATERFL-RVADL  391 (462)
T ss_pred             HhCCHHHHHHHHH-HHhcc
Confidence            5999999999998 67653

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.4e-38  Score=323.30  Aligned_cols=353  Identities=29%  Similarity=0.407  Sum_probs=267.7

Q ss_pred             CccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc-----ccCceeccccccCCCcccc---ccchhcccHHHHHHHHh
Q 009759          131 SYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE-----FYGAKLIGSRSFPCPWYQK---VPLSLALSPRIISEVAR  202 (526)
Q Consensus       131 ~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~  202 (526)
                      +..||.+.++.+++++|+++||+|+|++........     ..+..+..+...+......   ......+...+.+.+++
T Consensus        18 ~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (398)
T cd03800          18 ADTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLRFLRR   97 (398)
T ss_pred             CCCCceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEecccccccCCChhhcchhHHHHHHHHHHHHHh
Confidence            567999999999999999999999999865432211     1122222222111111110   11111234456666777


Q ss_pred             c--CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccccccccccc--ccchHHHHHHHHhhcCcEEEeCChhHHH
Q 009759          203 F--KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSW--LVKPMWLVIKFLHRAADLTLVPSVAIGK  278 (526)
Q Consensus       203 ~--~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ad~ii~~S~~~~~  278 (526)
                      .  +||+||+|.+.. .+.+..+++..++|+|++.|+............+  ........++.+++.+|.++++|+..++
T Consensus        98 ~~~~~Div~~~~~~~-~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~  176 (398)
T cd03800          98 EGGRPDLIHAHYWDS-GLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAE  176 (398)
T ss_pred             cCCCccEEEEecCcc-chHHHHHHhhcCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHH
Confidence            6  999999997543 3445666788899999999986543222111111  1122234567789999999999999999


Q ss_pred             HHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCC----CcEEE
Q 009759          279 DLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP----EARIA  354 (526)
Q Consensus       279 ~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~----~~~l~  354 (526)
                      .+.+.+..+..++.+++||+|.+.+.+.......+..... ..++++|+|+||+...||++.+++++..+.    +++|+
T Consensus       177 ~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~  255 (398)
T cd03800         177 ELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLR-DPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLV  255 (398)
T ss_pred             HHHHHccccccccEEECCCCCccceecccchhhHHHhhcc-CCCCcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEE
Confidence            9988876566679999999999887665433322333322 456789999999999999999999998873    79999


Q ss_pred             EEeCCccH------HHHHHHhcC----CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          355 FIGDGPYR------EELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       355 ivG~g~~~------~~l~~l~~~----~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      ++|++...      ..++.+.+.    .++.++|+++.+++..+|+.||++++||..|++|++++|||++|+|||+++.+
T Consensus       256 i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~  335 (398)
T cd03800         256 IVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVG  335 (398)
T ss_pred             EEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCC
Confidence            99976532      223333332    36999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 009759          425 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  488 (526)
Q Consensus       425 g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~  488 (526)
                      +..+++   +++.+|++++++|+++++++|.++++|++.++++++++++.+ ++|||+.++++++
T Consensus       336 ~~~e~i---~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~  397 (398)
T cd03800         336 GPRDIV---VDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVAARLL  397 (398)
T ss_pred             CHHHHc---cCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence            999999   888899999999999999999999999999999999999999 6899999999885

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=100.00  E-value=3.4e-38  Score=316.60  Aligned_cols=343  Identities=21%  Similarity=0.282  Sum_probs=256.9

Q ss_pred             EEEEE-eccCCCCc--cCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc----cCceeccccccCCCcc--cc--ccc
Q 009759          120 RIALF-VEPSPFSY--VSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF----YGAKLIGSRSFPCPWY--QK--VPL  188 (526)
Q Consensus       120 kIliv-~~~~p~~~--~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~--~~~  188 (526)
                      ||+++ ++-.|.|.  .||++.++.++++.|.   ++|++++.........    .+..+..+........  .+  ...
T Consensus         4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (380)
T PRK15484          4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTS---IPNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTRLD   80 (380)
T ss_pred             eEEEEeccCCCCCCccccHHHHHHHHhhhhcc---CCeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhccC
Confidence            77777 44445555  8899999999999994   3999999765431221    2223322211111000  10  001


Q ss_pred             hhcccHHHHHHHHh---cCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhc
Q 009759          189 SLALSPRIISEVAR---FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA  265 (526)
Q Consensus       189 ~~~~~~~l~~~l~~---~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (526)
                      ...+...+...+..   .++|+||+|+..  .+...+..+..+.|+++++|+.+.                   ...+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-------------------~~~~~~  139 (380)
T PRK15484         81 PLPYSQRILNIAHKFTITKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-------------------PELLDK  139 (380)
T ss_pred             chhHHHHHHHHHHhcCCCCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-------------------hhHhcc
Confidence            23334445555543   469999999843  222334455668899999997532                   123456


Q ss_pred             CcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHH
Q 009759          266 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM  345 (526)
Q Consensus       266 ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~  345 (526)
                      ++.++++|+..++.+.+.+  +..++.+||||+|.+.+.+. .....+.+++. ..+..+|+|+||+.+.||++.+++|+
T Consensus       140 ~~~ii~~S~~~~~~~~~~~--~~~~i~vIpngvd~~~~~~~-~~~~~~~~~~~-~~~~~~il~~Grl~~~Kg~~~Li~A~  215 (380)
T PRK15484        140 NAKIIVPSQFLKKFYEERL--PNADISIVPNGFCLETYQSN-PQPNLRQQLNI-SPDETVLLYAGRISPDKGILLLMQAF  215 (380)
T ss_pred             CCEEEEcCHHHHHHHHhhC--CCCCEEEecCCCCHHHcCCc-chHHHHHHhCC-CCCCeEEEEeccCccccCHHHHHHHH
Confidence            8999999999999988765  45789999999998877654 23334445543 34668899999999999999999999


Q ss_pred             HhC----CCcEEEEEeCCcc---------HHHHHHHhcC--CCeEEecccChhhHHHHHHcCcEEEecCCC-CCCcHHHH
Q 009759          346 DRL----PEARIAFIGDGPY---------REELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSES-ETLGLVVL  409 (526)
Q Consensus       346 ~~l----~~~~l~ivG~g~~---------~~~l~~l~~~--~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~-e~~~~~il  409 (526)
                      +.+    ++++|+|+|+|+.         .+.+++++.+  .++.++|+++.+++..+|+.||++|+||.. |+||++++
T Consensus       216 ~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~l  295 (380)
T PRK15484        216 EKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAV  295 (380)
T ss_pred             HHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHH
Confidence            876    7899999997642         2344445443  369999999999999999999999999985 99999999


Q ss_pred             HHHHcCCcEEEeCCCCCCceecccCCCceeE-eeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHH
Q 009759          410 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY-LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTI  487 (526)
Q Consensus       410 EAma~G~PvI~~~~gg~~e~v~~~~~~~~g~-~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~  487 (526)
                      ||||||+|||+++.||..|++   .++.+|+ ++++.|+++++++|.++++|++. .++++++++.+ ++|+|+.+++++
T Consensus       296 EAma~G~PVI~s~~gg~~Eiv---~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~~~~ar~~~~~~fsw~~~a~~~  371 (380)
T PRK15484        296 EAMAAGKPVLASTKGGITEFV---LEGITGYHLAEPMTSDSIISDINRTLADPEL-TQIAEQAKDFVFSKYSWEGVTQRF  371 (380)
T ss_pred             HHHHcCCCEEEeCCCCcHhhc---ccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHhCCHHHHHHHH
Confidence            999999999999999999999   8899998 56788999999999999999985 78999999987 699999999999


Q ss_pred             HHHHHHHH
Q 009759          488 RNEQYNAA  495 (526)
Q Consensus       488 ~~~ly~~~  495 (526)
                      + ++|++.
T Consensus       372 ~-~~l~~~  378 (380)
T PRK15484        372 E-EQIHNW  378 (380)
T ss_pred             H-HHHHHh
Confidence            7 777654

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.9e-38  Score=314.65  Aligned_cols=351  Identities=20%  Similarity=0.210  Sum_probs=253.3

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc---cccCceeccccccCCCccccccchhcccHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ---EFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      ||+++......+..||.+.++.+++++|.++||+|+|++.......   ...++.+..+.   ................+
T Consensus         1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~   77 (363)
T cd04955           1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQKETEYNGVRLIHIP---APEIGGLGTIIYDILAI   77 (363)
T ss_pred             CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCcccccCCceEEEcC---CCCccchhhhHHHHHHH
Confidence            6889866543477899999999999999999999999997654332   22233322222   11111111111111122


Q ss_pred             HHHH-HhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChh
Q 009759          197 ISEV-ARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVA  275 (526)
Q Consensus       197 ~~~l-~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~  275 (526)
                      .+.+ .+.++|++|...+..  .....+.+..+.|++++.|+.....  ...........+..++..++.+|.++++|+.
T Consensus        78 ~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~v~~~h~~~~~~--~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~  153 (363)
T cd04955          78 LHALFVKRDIDHVHALGPAI--APFLPLLRLKGKKVVVNMDGLEWKR--AKWGRPAKRYLKFGEKLAVKFADRLIADSPG  153 (363)
T ss_pred             HHHHhccCCeEEEEecCccH--HHHHHHHHhcCCCEEEEccCcceee--cccccchhHHHHHHHHHHHhhccEEEeCCHH
Confidence            2222 234455555554433  2233344556899999999853211  1111122233455677788999999999999


Q ss_pred             HHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCC-CcEEE
Q 009759          276 IGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP-EARIA  354 (526)
Q Consensus       276 ~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~-~~~l~  354 (526)
                      .++.+...++.  .. .+|+||+|...+.+   .........  ..+...++++|++.+.||++.++++++++. +++|+
T Consensus       154 ~~~~~~~~~~~--~~-~~i~ngv~~~~~~~---~~~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~l~  225 (363)
T cd04955         154 IKEYLKEKYGR--DS-TYIPYGADHVVSSE---EDEILKKYG--LEPGRYYLLVGRIVPENNIDDLIEAFSKSNSGKKLV  225 (363)
T ss_pred             HHHHHHHhcCC--CC-eeeCCCcChhhcch---hhhhHHhcC--CCCCcEEEEEecccccCCHHHHHHHHHhhccCceEE
Confidence            99999766653  23 89999999886644   112222222  234456899999999999999999999985 69999


Q ss_pred             EEeCCccHHHHHHHhc-----CCCeEEecccChhhHHHHHHcCcEEEecCCC-CCCcHHHHHHHHcCCcEEEeCCCCCCc
Q 009759          355 FIGDGPYREELEKMFT-----GMPAVFTGMLLGEELSQAYASGDVFVMPSES-ETLGLVVLEAMSSGIPVVGVRAGGIPD  428 (526)
Q Consensus       355 ivG~g~~~~~l~~l~~-----~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~-e~~~~~ilEAma~G~PvI~~~~gg~~e  428 (526)
                      ++|+|+....+.+.+.     ..+|+++|+++++++.++|.+||++++|+.. |++|++++|||++|+|||+++.|+..|
T Consensus       226 ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e  305 (363)
T cd04955         226 IVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNRE  305 (363)
T ss_pred             EEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccce
Confidence            9998754433333222     3479999999999999999999999999998 999999999999999999999999999


Q ss_pred             eecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 009759          429 IIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTIRNEQYN  493 (526)
Q Consensus       429 ~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~-~fs~~~~~~~~~~~ly~  493 (526)
                      ++   ++  +|++++++|.  ++++|.+++++++.+.++++++++.++ +|||+.++++++ ++|+
T Consensus       306 ~~---~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~-~~y~  363 (363)
T cd04955         306 VL---GD--KAIYFKVGDD--LASLLEELEADPEEVSAMAKAARERIREKYTWEKIADQYE-ELYK  363 (363)
T ss_pred             ee---cC--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHhC
Confidence            99   44  7888886665  999999999999999999999999985 799999999997 7763

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=100.00  E-value=1.9e-38  Score=318.80  Aligned_cols=346  Identities=28%  Similarity=0.365  Sum_probs=267.6

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccC--CCc--cccccchhcccHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFP--CPW--YQKVPLSLALSPR  195 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~  195 (526)
                      ||+++.+.++    ++.+.++.++++.|.  ||+|++++........... ...++....  ...  .............
T Consensus         1 ~~~~~~~~~~----~~~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (367)
T cd05844           1 RVLIFRPLLL----APSETFVRNQAEALR--RFRPVYVGGRRLGPAPLGA-LAVRLADLAGGKAGLRLGALRLLTGSAPQ   73 (367)
T ss_pred             CEEEEeCCCC----CCchHHHHHHHHhcc--cCCcEEEEeeccCCCCCcc-cceeeeecccchhHHHHHHHHhccccccH
Confidence            5788887655    348899999999995  7888888865432211111 111111110  000  0011112334456


Q ss_pred             HHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChh
Q 009759          196 IISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVA  275 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~  275 (526)
                      +..++++.+||+||+|... ....+..+++..++|++++.|+.....................++.+++.+|.++++|+.
T Consensus        74 ~~~~~~~~~~dvvh~~~~~-~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~  152 (367)
T cd05844          74 LRRLLRRHRPDLVHAHFGF-DGVYALPLARRLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQF  152 (367)
T ss_pred             HHHHHHhhCCCEEEeccCc-hHHHHHHHHHHcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHH
Confidence            6667889999999998754 334455567888999999999754322211111111223345677788999999999999


Q ss_pred             HHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCc
Q 009759          276 IGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEA  351 (526)
Q Consensus       276 ~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~  351 (526)
                      +++.+.+.+ .+..++.+++||+|.+.+.+..           ...+...++|+|++.+.||++.+++++..+    +++
T Consensus       153 ~~~~~~~~~-~~~~~i~vi~~g~d~~~~~~~~-----------~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~  220 (367)
T cd05844         153 IRDRLLALG-FPPEKVHVHPIGVDTAKFTPAT-----------PARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEV  220 (367)
T ss_pred             HHHHHHHcC-CCHHHeEEecCCCCHHhcCCCC-----------CCCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCe
Confidence            999998874 3667899999999988776542           134567899999999999999999999766    589


Q ss_pred             EEEEEeCCccHHHHHHHhcC----CCeEEecccChhhHHHHHHcCcEEEecCC------CCCCcHHHHHHHHcCCcEEEe
Q 009759          352 RIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSE------SETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       352 ~l~ivG~g~~~~~l~~l~~~----~~V~~~g~v~~~~l~~~~~~aDv~v~ps~------~e~~~~~ilEAma~G~PvI~~  421 (526)
                      +|+++|+|+..+++++++++    .+|+++|+++++++..+|+.||++|+||.      .||+|++++|||++|+|||++
T Consensus       221 ~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s  300 (367)
T cd05844         221 RLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVAT  300 (367)
T ss_pred             EEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEe
Confidence            99999999888888877765    36999999999999999999999999996      489999999999999999999


Q ss_pred             CCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 009759          422 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  488 (526)
Q Consensus       422 ~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~  488 (526)
                      +.++..|++   .++.+|++++++|+++++++|.++++|++.+++++.++++.+ ++|||+..++++.
T Consensus       301 ~~~~~~e~i---~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~  365 (367)
T cd05844         301 RHGGIPEAV---EDGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLE  365 (367)
T ss_pred             CCCCchhhe---ecCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence            999999999   889999999999999999999999999999999999999998 5899999999885

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3e-38  Score=317.01  Aligned_cols=362  Identities=31%  Similarity=0.517  Sum_probs=276.9

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      ||++++..+| |..||.+.++..++++|.++||+|++++.....................................+...
T Consensus         1 kil~~~~~~~-p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
T cd03817           1 KIGIFTDTYL-PQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRALIII   79 (374)
T ss_pred             CeeEeehhcc-CCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccccccccccccccchhhhhhccccHHHHHHHH
Confidence            6899988766 788999999999999999999999999976543322111111111000011112222223334455666


Q ss_pred             HHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccccccccc--ccccchHH-HHHHHHhhcCcEEEeCChhH
Q 009759          200 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF--SWLVKPMW-LVIKFLHRAADLTLVPSVAI  276 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~ad~ii~~S~~~  276 (526)
                      +++.+||+||++.+......+..+++..++|++++.|+.+..+......  ........ ..++.+++.+|.++++|+..
T Consensus        80 ~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~  159 (374)
T cd03817          80 LKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKI  159 (374)
T ss_pred             HhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHH
Confidence            8889999999998755555566677888999999999876533221111  11111122 56788899999999999999


Q ss_pred             HHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcE
Q 009759          277 GKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEAR  352 (526)
Q Consensus       277 ~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~  352 (526)
                      ++.+...+.  ..++.+++||+|...+.+.... ..+..... ..+++.++++|++.+.||++.++++++.+    ++++
T Consensus       160 ~~~~~~~~~--~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~  235 (374)
T cd03817         160 ADLLREYGV--KRPIEVIPTGIDLDRFEPVDGD-DERRKLGI-PEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVK  235 (374)
T ss_pred             HHHHHhcCC--CCceEEcCCccchhccCccchh-HHHHhcCC-CCCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeE
Confidence            999887653  3569999999999887665322 22333332 45678899999999999999999999876    5799


Q ss_pred             EEEEeCCccHHHHHHHhcC----CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCc
Q 009759          353 IAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD  428 (526)
Q Consensus       353 l~ivG~g~~~~~l~~l~~~----~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e  428 (526)
                      |+++|.|+..+.+++++++    .+|.++|+++++++..+|+.||++++|+..|++|++++|||++|+|||+++.|+..+
T Consensus       236 l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~  315 (374)
T cd03817         236 LVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPD  315 (374)
T ss_pred             EEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCChhh
Confidence            9999999888888777643    369999999999999999999999999999999999999999999999999999999


Q ss_pred             eecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 009759          429 IIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       429 ~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~  494 (526)
                      ++   .++.+|+++++++. +++++|.+++++++.++++++++++.+++++   .++++. ++|++
T Consensus       316 ~i---~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~  373 (374)
T cd03817         316 LV---ADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNAEESAEKFS---FAKKVE-KLYEE  373 (374)
T ss_pred             he---ecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHHHHHHHHHH---HHHHHH-HHHhc
Confidence            99   88899999998777 9999999999999999999999999997766   444553 55543

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.6e-38  Score=320.43  Aligned_cols=351  Identities=20%  Similarity=0.265  Sum_probs=250.4

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCcc------ccccch----
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWY------QKVPLS----  189 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----  189 (526)
                      |||||...+|        .....|+++|.++||+|++++......... ++++..+...+....      ......    
T Consensus         1 ~il~~~~~~p--------~~~~~la~~L~~~G~~v~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (396)
T cd03818           1 RILFVHQNFP--------GQFRHLAPALAAQGHEVVFLTEPNAAPPPG-GVRVVRYRPPRGPTSGTHPYLREFEEAVLRG   71 (396)
T ss_pred             CEEEECCCCc--------hhHHHHHHHHHHCCCEEEEEecCCCCCCCC-CeeEEEecCCCCCCCCCCccchhHHHHHHHH
Confidence            6899988777        346789999999999999999876543222 344444332221110      000000    


Q ss_pred             hcccHHHHHH-HHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcc------cccccccccc-cchHH---HH
Q 009759          190 LALSPRIISE-VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV------YIPRYTFSWL-VKPMW---LV  258 (526)
Q Consensus       190 ~~~~~~l~~~-l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------~~~~~~~~~~-~~~~~---~~  258 (526)
                      ......+..+ .+.++||+||+|......  ..+.....++|+|.++|-.+..      +......... ....+   ..
T Consensus        72 ~~~~~~~~~~~~~~~~pdvi~~h~~~~~~--~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (396)
T cd03818          72 QAVARALLALRAKGFRPDVIVAHPGWGET--LFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNAL  149 (396)
T ss_pred             HHHHHHHHHHHhcCCCCCEEEECCccchh--hhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhH
Confidence            1111122222 234689999999743222  2222333578998877532211      1111111100 01111   12


Q ss_pred             HHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHH-HHHhhcCCCCCCcEEEEEec-ccccc
Q 009759          259 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE-MRWRLSNGEPDKPLIVHVGR-LGVEK  336 (526)
Q Consensus       259 ~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~vG~-l~~~K  336 (526)
                      ....++.+|.++++|+..++.+...+   .+++.+|+||+|.+.|.+...... .+.... ...+.++|+|+|| +.+.|
T Consensus       150 ~~~~~~~ad~vi~~s~~~~~~~~~~~---~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~-~~~~~~~i~~vgR~l~~~K  225 (396)
T cd03818         150 ILLALAQADAGVSPTRWQRSTFPAEL---RSRISVIHDGIDTDRLRPDPQARLRLPNGRV-LTPGDEVITFVARNLEPYR  225 (396)
T ss_pred             hHHHHHhCCEEECCCHHHHhhCcHhh---ccceEEeCCCccccccCCCchhhhccccccc-CCCCCeEEEEECCCccccc
Confidence            44678999999999999999887654   268999999999998876532211 111111 1346778999997 99999


Q ss_pred             cHHHHHHHHHhC----CCcEEEEEeCCc------------cHHH-HHHHhc---CCCeEEecccChhhHHHHHHcCcEEE
Q 009759          337 SLDFLKRVMDRL----PEARIAFIGDGP------------YREE-LEKMFT---GMPAVFTGMLLGEELSQAYASGDVFV  396 (526)
Q Consensus       337 g~~~li~a~~~l----~~~~l~ivG~g~------------~~~~-l~~l~~---~~~V~~~g~v~~~~l~~~~~~aDv~v  396 (526)
                      |++.+++|+..+    ++++|+|+|++.            +.+. ++++..   ..+|+|+|+++++++..+|+.||+++
T Consensus       226 g~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~~l~~adv~v  305 (396)
T cd03818         226 GFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHV  305 (396)
T ss_pred             CHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHHHHHhCcEEE
Confidence            999999999765    689999999632            1222 233332   34799999999999999999999999


Q ss_pred             ecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHH
Q 009759          397 MPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME  476 (526)
Q Consensus       397 ~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~  476 (526)
                      +||..|++|++++||||||+|||+++.||..|++   .++.+|++++++|+++++++|.++++|++.+.+|++++++.++
T Consensus       306 ~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i---~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~  382 (396)
T cd03818         306 YLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVI---TDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTAL  382 (396)
T ss_pred             EcCcccccchHHHHHHHCCCCEEEcCCCCchhhc---ccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999   8899999999999999999999999999999999999999995


Q ss_pred             -hCCHHHHHHHHH
Q 009759          477 -KYDWRAATRTIR  488 (526)
Q Consensus       477 -~fs~~~~~~~~~  488 (526)
                       +|+|+.++++++
T Consensus       383 ~~fs~~~~~~~~~  395 (396)
T cd03818         383 RYDLLSVCLPRQL  395 (396)
T ss_pred             HhccHHHHHHHHh
Confidence             699999998875

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.1e-38  Score=315.82  Aligned_cols=344  Identities=28%  Similarity=0.373  Sum_probs=263.2

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcccc---CceeccccccCCCccccccchhcccHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFY---GAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      ||+++...++ |..||.+..+..++++|.++||+|++++..........   +.........     .... .......+
T Consensus         1 kil~i~~~~~-p~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~   73 (357)
T cd03795           1 RVLHVGKFYP-PDRGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDEERNGHRVIRAPSL-----LNVA-STPFSPSF   73 (357)
T ss_pred             CeeEecCCCC-CCCCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhhhccCceEEEeecc-----cccc-cccccHHH
Confidence            6889987665 55899999999999999999999999997654332211   1111111110     0000 00011111


Q ss_pred             HHH--HHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCCh
Q 009759          197 ISE--VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV  274 (526)
Q Consensus       197 ~~~--l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~  274 (526)
                      ...  +...++|+||++.+......... ....++|+++++|+.....      .........+++.+++.+|.++++|+
T Consensus        74 ~~~~~~~~~~~Dii~~~~~~~~~~~~~~-~~~~~~~~i~~~h~~~~~~------~~~~~~~~~~~~~~~~~~d~vi~~s~  146 (357)
T cd03795          74 FKQLKKLAKKADVIHLHFPNPLADLALL-LLPRKKPVVVHWHSDIVKQ------KLLLKLYRPLQRRFLRRADAIVATSP  146 (357)
T ss_pred             HHHHHhcCCCCCEEEEecCcchHHHHHH-HhccCceEEEEEcChhhcc------chhhhhhhHHHHHHHHhcCEEEeCcH
Confidence            111  45679999999986544333222 2236889999999743211      12223344567778999999999999


Q ss_pred             hHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCCCcEEE
Q 009759          275 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIA  354 (526)
Q Consensus       275 ~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~  354 (526)
                      ...+.+...+.. ..++.++|||+|...+.+......   .......+.+.++|+|++.+.||++.++++++++.+++|+
T Consensus       147 ~~~~~~~~~~~~-~~~~~~i~~gi~~~~~~~~~~~~~---~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~l~  222 (357)
T cd03795         147 NYAETSPVLRRF-RDKVRVIPLGLDPARYPRPDALEE---AIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALPDAPLV  222 (357)
T ss_pred             HHHHHHHHhcCC-ccceEEecCCCChhhcCCcchhhh---HhhcCCCCCcEEEEecccccccCHHHHHHHHHhccCcEEE
Confidence            999988776653 378999999999987765432111   1111245678999999999999999999999999889999


Q ss_pred             EEeCCccHHHHHHHhcC----CCeEEecccChhhHHHHHHcCcEEEecCC--CCCCcHHHHHHHHcCCcEEEeCCCCCCc
Q 009759          355 FIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPD  428 (526)
Q Consensus       355 ivG~g~~~~~l~~l~~~----~~V~~~g~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~ilEAma~G~PvI~~~~gg~~e  428 (526)
                      ++|+|+..+.+++++++    .+|.++|+++++++.++|+.||++++||.  .|++|++++|||++|+|||+++.++..+
T Consensus       223 i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~  302 (357)
T cd03795         223 IVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGS  302 (357)
T ss_pred             EEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchh
Confidence            99999888888777632    37999999999999999999999999986  5999999999999999999999999999


Q ss_pred             eecccCC-CceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHH
Q 009759          429 IIPEDQD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAAT  484 (526)
Q Consensus       429 ~v~~~~~-~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~  484 (526)
                      .+   .+ +.+|++++++|+++++++|.++++|++.++++++++++.+ ++|||+.++
T Consensus       303 ~i---~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~  357 (357)
T cd03795         303 YV---NLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARERAEEEFTADRMV  357 (357)
T ss_pred             HH---hhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchHhhC
Confidence            88   65 8899999999999999999999999999999999999999 589999763

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=100.00  E-value=3.1e-38  Score=315.58  Aligned_cols=339  Identities=28%  Similarity=0.385  Sum_probs=269.0

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccC-ceeccccccCCCccccccchhcccHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYG-AKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      |||+++..+|    +|.+.++.++++.|.++||+|.+++........... ......   .................+.+
T Consensus         1 ki~~~~~~~~----~~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   73 (355)
T cd03799           1 KIAYLVKEFP----RLSETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELA---RTRYLARSLALLAQALVLAR   73 (355)
T ss_pred             CEEEECCCCC----CcchHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccc---chHHHHHHHHHHHHHHHHHH
Confidence            6999998765    447899999999999999999999976543221110 000000   00001111122333445666


Q ss_pred             HHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHH
Q 009759          199 EVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGK  278 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~  278 (526)
                      .+++.++|+||+|..........+.++..++|++++.|+........          ...++..++.+|.++++|+..++
T Consensus        74 ~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~vi~~s~~~~~  143 (355)
T cd03799          74 ELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPD----------AIDLDEKLARADFVVAISEYNRQ  143 (355)
T ss_pred             HHHhcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCc----------hHHHHHHHhhCCEEEECCHHHHH
Confidence            67788999999998755555555566666899999999753221110          03567788999999999999999


Q ss_pred             HHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEE
Q 009759          279 DLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIA  354 (526)
Q Consensus       279 ~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~  354 (526)
                      .+.+.++.+..++.+++||+|.+.+.+....         ...++..|+|+|++.+.||++.+++++..+    ++++++
T Consensus       144 ~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~~---------~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~  214 (355)
T cd03799         144 QLIRLLGCDPDKIHVVHCGVDLERFPPRPPP---------PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLD  214 (355)
T ss_pred             HHHHhcCCCcccEEEEeCCcCHHHcCCcccc---------ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEE
Confidence            9999855567899999999998877654200         245677899999999999999999999877    479999


Q ss_pred             EEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCC------CCCcHHHHHHHHcCCcEEEeCCC
Q 009759          355 FIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSES------ETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       355 ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~------e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      ++|.++..+.+++.+++.    +|.+.|+++.+++..+|++||++++|+..      |++|++++|||++|+|||+++.|
T Consensus       215 i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~  294 (355)
T cd03799         215 IVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS  294 (355)
T ss_pred             EEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCC
Confidence            999998888877766543    69999999999999999999999999998      99999999999999999999999


Q ss_pred             CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHH
Q 009759          425 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTI  487 (526)
Q Consensus       425 g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~  487 (526)
                      +.++++   +++.+|++++++|+++++++|.+++++++.+.++++++++.+ ++|+|+..++++
T Consensus       295 ~~~~~i---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l  355 (355)
T cd03799         295 GIPELV---EDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAARL  355 (355)
T ss_pred             Ccchhh---hCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence            999999   888899999999999999999999999999999999999998 589999988753

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>TIGR02470 sucr_synth sucrose synthase

Probab=100.00  E-value=7.2e-38  Score=326.69  Aligned_cols=378  Identities=19%  Similarity=0.266  Sum_probs=262.4

Q ss_pred             CCCcEEEEEeccC--------CCCccCchHHHHHHHHHHH--------HHCCC----eEEEEEeCCCCC---------cc
Q 009759          116 SRPRRIALFVEPS--------PFSYVSGYKNRFQNFIKYL--------REMGD----EVMVVTTHEGVP---------QE  166 (526)
Q Consensus       116 ~~~mkIliv~~~~--------p~~~~gG~~~~~~~l~~~L--------~~~G~----~V~vi~~~~~~~---------~~  166 (526)
                      ...|||++++.+.        ..++.||...++.+++++|        +++||    +|.|+|......         +.
T Consensus       253 p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~  332 (784)
T TIGR02470       253 PMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEK  332 (784)
T ss_pred             CccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccccccccccc
Confidence            5569999997765        2234688888999999975        68899    777998653311         11


Q ss_pred             c---cCceeccccccCCC------cccc---ccchhcccHHHHHHHH---hcCCCEEEECCCchHHHHHHHHHHhcCCCE
Q 009759          167 F---YGAKLIGSRSFPCP------WYQK---VPLSLALSPRIISEVA---RFKPDIIHASSPGIMVFGALIIAKLLCVPI  231 (526)
Q Consensus       167 ~---~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~l~~~l~---~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~  231 (526)
                      .   .+..+.+++.-+..      +..+   .+....+...+.+.+.   ..+||+||+|.+.. .+.+..+++..++|.
T Consensus       333 ~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~-glva~lla~~lgVP~  411 (784)
T TIGR02470       333 VYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDG-NLVASLLARKLGVTQ  411 (784)
T ss_pred             ccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCch-HHHHHHHHHhcCCCE
Confidence            1   12233332222211      0111   1111222233444333   23699999999754 455678899999999


Q ss_pred             EEEEecCCcccccccccccc--cchH-----HHHHHHHhhcCcEEEeCChhHHH----HHHHh-----------c----c
Q 009759          232 VMSYHTHVPVYIPRYTFSWL--VKPM-----WLVIKFLHRAADLTLVPSVAIGK----DLEAA-----------R----V  285 (526)
Q Consensus       232 v~~~h~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~ad~ii~~S~~~~~----~l~~~-----------~----~  285 (526)
                      +.+.|.............+.  ...+     ...+..++..||.||+.|..+..    .+..+           +    +
T Consensus       412 v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnG  491 (784)
T TIGR02470       412 CTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHG  491 (784)
T ss_pred             EEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecC
Confidence            99999764322111111111  0011     12255788899999999976533    22211           1    1


Q ss_pred             --cCCCcEEEeecCCCCCCCCCCcccHH------------------HHHhhcC-CCCCCcEEEEEecccccccHHHHHHH
Q 009759          286 --TAANKIRIWKKGVDSESFHPRFRSSE------------------MRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRV  344 (526)
Q Consensus       286 --~~~~ki~vi~ngid~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~i~~vG~l~~~Kg~~~li~a  344 (526)
                        .+..|+.+||+|+|.+.|.|......                  .+..++. ..+++++|+++||+.+.||++.+++|
T Consensus       492 id~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA  571 (784)
T TIGR02470       492 IDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVEC  571 (784)
T ss_pred             ccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHH
Confidence              14579999999999998876533211                  1123332 24578899999999999999999999


Q ss_pred             HHhC----CCcEEEEEeCCcc------------HHHHHHHhcCC----CeEEeccc-ChhhHHHHHH----cCcEEEecC
Q 009759          345 MDRL----PEARIAFIGDGPY------------REELEKMFTGM----PAVFTGML-LGEELSQAYA----SGDVFVMPS  399 (526)
Q Consensus       345 ~~~l----~~~~l~ivG~g~~------------~~~l~~l~~~~----~V~~~g~v-~~~~l~~~~~----~aDv~v~ps  399 (526)
                      +.++    ++++|+|+|++..            .+.+.+++++.    +|.|+|++ +..++.++|+    .+|++|+||
T Consensus       572 ~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS  651 (784)
T TIGR02470       572 YGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPA  651 (784)
T ss_pred             HHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECC
Confidence            9765    3589999997532            12344455543    59999985 4455555554    358999999


Q ss_pred             CCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhh----hCHHHHHHHHHHHHHHH
Q 009759          400 ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL----YNQELRETMGQAARQEM  475 (526)
Q Consensus       400 ~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll----~d~~~~~~~~~~a~~~~  475 (526)
                      .+|+||++++||||||+|||+|+.||..|++   .++.+|+++++.|+++++++|.+++    .|++.++++++++++.+
T Consensus       652 ~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV---~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV  728 (784)
T TIGR02470       652 LYEAFGLTVLEAMTCGLPTFATRFGGPLEII---QDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRI  728 (784)
T ss_pred             cccCCCHHHHHHHHcCCCEEEcCCCCHHHHh---cCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999   8999999999999999999999876    69999999999999998


Q ss_pred             -HhCCHHHHHHHHHHHHHHHHHHHH
Q 009759          476 -EKYDWRAATRTIRNEQYNAAIWFW  499 (526)
Q Consensus       476 -~~fs~~~~~~~~~~~ly~~~l~~~  499 (526)
                       ++|||+.++++++ .+. .+-..|
T Consensus       729 ~~~FSW~~~A~~ll-~l~-~~~~~~  751 (784)
T TIGR02470       729 YEKYTWKIYSERLL-TLA-GIYGFW  751 (784)
T ss_pred             HHhCCHHHHHHHHH-HHH-hhhhHh
Confidence             6899999999997 443 555566

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.3e-38  Score=323.03  Aligned_cols=357  Identities=19%  Similarity=0.240  Sum_probs=256.2

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc----cC-ceeccccc-cCCCccccccchhcc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF----YG-AKLIGSRS-FPCPWYQKVPLSLAL  192 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~----~~-~~~~~~~~-~~~~~~~~~~~~~~~  192 (526)
                      ||||++...   ...||.++++..+++.|.++||+|++++........+    .+ ..+..... .+.............
T Consensus         1 mkIl~~~~~---~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   77 (392)
T cd03805           1 LRVAFIHPD---LGIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWLPRSIFGRFHILCAY   77 (392)
T ss_pred             CeEEEECCC---CCCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhcchhccCCeeEEEEEeEEEcchhhHhHHHHHHH
Confidence            899999653   4579999999999999999999999999754321111    11 11110000 000000000000000


Q ss_pred             cHHHH-----HHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccc--cccccccchHHHHHHHHhhc
Q 009759          193 SPRII-----SEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPR--YTFSWLVKPMWLVIKFLHRA  265 (526)
Q Consensus       193 ~~~l~-----~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  265 (526)
                      ...+.     ..++..++|+||++.......   +.....+.|++++.|.........  ............+++..++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~---~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  154 (392)
T cd03805          78 LRMLYLALYLLLLPDEKYDVFIVDQVSACVP---LLKLFSPSKILFYCHFPDQLLAQRGSLLKRLYRKPFDWLEEFTTGM  154 (392)
T ss_pred             HHHHHHHHHHHhcccCCCCEEEEcCcchHHH---HHHHhcCCcEEEEEecChHHhcCCCcHHHHHHHHHHHHHHHHHhhC
Confidence            11111     134557999999987543221   222333489999999432211110  00011122344667788999


Q ss_pred             CcEEEeCChhHHHHHHHhcccCC-CcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHH
Q 009759          266 ADLTLVPSVAIGKDLEAARVTAA-NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRV  344 (526)
Q Consensus       266 ad~ii~~S~~~~~~l~~~~~~~~-~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a  344 (526)
                      +|.++++|+..++.+.+.++... .++.+|+||+|.+.+.+..... .... .....+.++++++|++.+.||++.++++
T Consensus       155 ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~-~~~~-~~~~~~~~~i~~~grl~~~Kg~~~ll~a  232 (392)
T cd03805         155 ADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP-DPGL-LIPKSGKKTFLSINRFERKKNIALAIEA  232 (392)
T ss_pred             ceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc-cccc-cccCCCceEEEEEeeecccCChHHHHHH
Confidence            99999999999998887654222 3345999999998776543221 1111 1134677889999999999999999999


Q ss_pred             HHhC-------CCcEEEEEeCCcc--------HHHHHHHhcC-----CCeEEecccChhhHHHHHHcCcEEEecCCCCCC
Q 009759          345 MDRL-------PEARIAFIGDGPY--------REELEKMFTG-----MPAVFTGMLLGEELSQAYASGDVFVMPSESETL  404 (526)
Q Consensus       345 ~~~l-------~~~~l~ivG~g~~--------~~~l~~l~~~-----~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~  404 (526)
                      ++++       ++++|+++|+|+.        .+++++++++     .+|.|+|+++.+++..+|+.||++++||..|++
T Consensus       233 ~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~  312 (392)
T cd03805         233 FAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSARALLYTPSNEHF  312 (392)
T ss_pred             HHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCC
Confidence            9876       4789999998754        2566666655     369999999999999999999999999999999


Q ss_pred             cHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHH
Q 009759          405 GLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAA  483 (526)
Q Consensus       405 ~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~  483 (526)
                      |++++|||+||+|||+++.||..|++   .++.+|++++. |+++++++|.+++++++.++++++++++.+ ++|+|+.+
T Consensus       313 g~~~lEAma~G~PvI~s~~~~~~e~i---~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~  388 (392)
T cd03805         313 GIVPLEAMYAGKPVIACNSGGPLETV---VDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAGRKRVKEKFSTEAF  388 (392)
T ss_pred             CchHHHHHHcCCCEEEECCCCcHHHh---ccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhcCHHHH
Confidence            99999999999999999999999999   88889999876 899999999999999999999999999998 58999999


Q ss_pred             HHHH
Q 009759          484 TRTI  487 (526)
Q Consensus       484 ~~~~  487 (526)
                      ++++
T Consensus       389 ~~~~  392 (392)
T cd03805         389 AERL  392 (392)
T ss_pred             hhhC
Confidence            8764

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>PRK10125 putative glycosyl transferase; Provisional

Probab=100.00  E-value=9.4e-38  Score=313.88  Aligned_cols=350  Identities=15%  Similarity=0.089  Sum_probs=242.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccc---------cCCCccccc-cc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRS---------FPCPWYQKV-PL  188 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~  188 (526)
                      ||||.|...   ...||+++.+.+|++.|.++||+|.++....................         ......+.. ..
T Consensus         1 mkil~i~~~---l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (405)
T PRK10125          1 MNILQFNVR---LAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRD   77 (405)
T ss_pred             CeEEEEEee---ecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccccCCcceEEEecccHHHHHHHHHHHhcchh
Confidence            899999764   55699999999999999999999999987654333211111100000         000000000 01


Q ss_pred             hhcccHHHHHHH-HhcCCCEEEECCCchHH--HHHH------HHHHhcCCCEEEEEecCCccc--------ccc------
Q 009759          189 SLALSPRIISEV-ARFKPDIIHASSPGIMV--FGAL------IIAKLLCVPIVMSYHTHVPVY--------IPR------  245 (526)
Q Consensus       189 ~~~~~~~l~~~l-~~~~pDiV~~~~~~~~~--~~~~------~~~~~~~~p~v~~~h~~~~~~--------~~~------  245 (526)
                      .+.....+.+.+ ++++|||||+|+.+...  +..+      +..+..++|+|+|.||.++..        ...      
T Consensus        78 ~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~  157 (405)
T PRK10125         78 LFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQ  157 (405)
T ss_pred             hcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCC
Confidence            123344556666 58899999999865321  1111      113455799999999988552        000      


Q ss_pred             -------cccccc------cchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHH
Q 009759          246 -------YTFSWL------VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEM  312 (526)
Q Consensus       246 -------~~~~~~------~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~  312 (526)
                             +.....      ....+...+.+.+.++.++++|++.++.+.+.++  ..++.+|+||+|.+.+.+.......
T Consensus       158 ~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~--~~~i~vI~NGid~~~~~~~~~~~~~  235 (405)
T PRK10125        158 KCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYG--PGRCRIINNGIDMATEAILAELPPV  235 (405)
T ss_pred             CCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcC--CCCEEEeCCCcCccccccccccccc
Confidence                   000000      0111222334455678999999999999887654  4789999999997533221111000


Q ss_pred             HHhhcCCCCCCcEEEEEecc--cccccHHHHHHHHHhC-CCcEEEEEeCCccHHHHHHHhcCCCeEEecccC-hhhHHHH
Q 009759          313 RWRLSNGEPDKPLIVHVGRL--GVEKSLDFLKRVMDRL-PEARIAFIGDGPYREELEKMFTGMPAVFTGMLL-GEELSQA  388 (526)
Q Consensus       313 ~~~~~~~~~~~~~i~~vG~l--~~~Kg~~~li~a~~~l-~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~-~~~l~~~  388 (526)
                      +     ...++++++++|+.  .+.||++.+++|+..+ ++++|+++|.|+...       ..++.++|+.. .+++.++
T Consensus       236 ~-----~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~~~~-------~~~v~~~g~~~~~~~l~~~  303 (405)
T PRK10125        236 R-----ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFSPFT-------AGNVVNHGFETDKRKLMSA  303 (405)
T ss_pred             c-----cCCCCCEEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCCccc-------ccceEEecCcCCHHHHHHH
Confidence            0     13466789999984  4789999999999988 579999999875321       23688899874 4789999


Q ss_pred             HHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHH--
Q 009759          389 YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET--  466 (526)
Q Consensus       389 ~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~--  466 (526)
                      |++||++|+||..|++|++++||||||+|||+|++||++|++   .++ +|++++++|+++|++++     +++..++  
T Consensus       304 y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv---~~~-~G~lv~~~d~~~La~~~-----~~~~~~~~~  374 (405)
T PRK10125        304 LNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVL---QKS-GGKTVSEEEVLQLAQLS-----KPEIAQAVF  374 (405)
T ss_pred             HHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhE---eCC-cEEEECCCCHHHHHhcc-----CHHHHHHhh
Confidence            999999999999999999999999999999999999999999   654 89999999999999854     4443333  


Q ss_pred             --HHHHHHHHH-HhCCHHHHHHHHHHHHHHHH
Q 009759          467 --MGQAARQEM-EKYDWRAATRTIRNEQYNAA  495 (526)
Q Consensus       467 --~~~~a~~~~-~~fs~~~~~~~~~~~ly~~~  495 (526)
                        +.+++++.+ ++|||+.++++++ ++|+++
T Consensus       375 ~~~~~~~r~~~~~~fs~~~~~~~y~-~lY~~l  405 (405)
T PRK10125        375 GTTLAEFSQRSRAAYSGQQMLEEYV-NFYQNL  405 (405)
T ss_pred             hhHHHHHHHHHHHhCCHHHHHHHHH-HHHHhC
Confidence              234577776 5899999999998 899763

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=100.00  E-value=2.8e-37  Score=308.71  Aligned_cols=363  Identities=33%  Similarity=0.499  Sum_probs=283.9

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccc-cCCCccccccchhcccHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRS-FPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      ||++++..++ +..||+..++..+++.|.+.||+|.+++................... ..................+.+
T Consensus         1 kI~ii~~~~~-~~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
T cd03801           1 KILLVTPEYP-PSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRR   79 (374)
T ss_pred             CeeEEecccC-CccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHHH
Confidence            6889988765 34799999999999999999999999998765433221111110000 000111111222334456777


Q ss_pred             HHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHH
Q 009759          199 EVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGK  278 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~  278 (526)
                      .+++.++|+||++.+....... ..++..++|++++.|+......... ............+..++.+|.+++.|+...+
T Consensus        80 ~~~~~~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~  157 (374)
T cd03801          80 LLRRERFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNE-LGLLLKLARALERRALRRADRIIAVSEATRE  157 (374)
T ss_pred             HhhhcCCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccc-hhHHHHHHHHHHHHHHHhCCEEEEecHHHHH
Confidence            7888899999999976554433 5677789999999999765433221 1122334456778889999999999999999


Q ss_pred             HHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEE
Q 009759          279 DLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIA  354 (526)
Q Consensus       279 ~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~  354 (526)
                      .+.+.+..+..++.+++||++...+.+..  ...+.... ...+.+.++++|++...||++.+++++..+    ++++|+
T Consensus       158 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~  234 (374)
T cd03801         158 ELRELGGVPPEKITVIPNGVDTERFRPAP--RAARRRLG-IPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLV  234 (374)
T ss_pred             HHHhcCCCCCCcEEEecCcccccccCccc--hHHHhhcC-CcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCCeEEE
Confidence            99998865557999999999998876542  11111111 245678899999999999999999999877    369999


Q ss_pred             EEeCCccHHHHHHHhc----CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCcee
Q 009759          355 FIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII  430 (526)
Q Consensus       355 ivG~g~~~~~l~~l~~----~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v  430 (526)
                      ++|.+...+.++++++    ..+|.+.|+++.+++.++|+.||++++|+..|++|++++|||++|+|||+++.++..+++
T Consensus       235 i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~  314 (374)
T cd03801         235 IVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVV  314 (374)
T ss_pred             EEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHh
Confidence            9998887777776652    337999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH
Q 009759          431 PEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQY  492 (526)
Q Consensus       431 ~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly  492 (526)
                         .++.+|+++++.|+++++++|.+++.|++.++++++++++.+ ++|+|+.+++++. ++|
T Consensus       315 ---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  373 (374)
T cd03801         315 ---EDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTE-EVY  373 (374)
T ss_pred             ---cCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHHHHH-Hhh
Confidence               788999999999999999999999999999999999999776 6899999999997 555

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6e-38  Score=314.36  Aligned_cols=355  Identities=23%  Similarity=0.309  Sum_probs=270.9

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      ||++++...+....||++.++.+++++|.+.||+|++++.........................................
T Consensus         1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (365)
T cd03809           1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLL   80 (365)
T ss_pred             CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHHH
Confidence            68888776542268999999999999999999999999987653332211111110001111111111122223344455


Q ss_pred             HHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHH
Q 009759          200 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD  279 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~  279 (526)
                      +...++|+||++.......      +..++|+++++||..+..................++.+++.+|.++++|+..++.
T Consensus        81 ~~~~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~  154 (365)
T cd03809          81 LLLLGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRD  154 (365)
T ss_pred             hhhcCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHH
Confidence            5567999999998654322      6679999999999776554443333334455677888999999999999999999


Q ss_pred             HHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCC----CcEEEE
Q 009759          280 LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP----EARIAF  355 (526)
Q Consensus       280 l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~----~~~l~i  355 (526)
                      +.+.++.+..++.+++||+|...+.......  +.... ...++.+|+++|++.+.||++.+++++..++    +++|++
T Consensus       155 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i  231 (365)
T cd03809         155 LLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE--VLRAL-YLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVI  231 (365)
T ss_pred             HHHHhCcCHHHEEeeccccCccccCCCchHH--HHHHh-cCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEE
Confidence            9998765667999999999998876543222  22221 3557789999999999999999999998883    479999


Q ss_pred             EeCCccH-HHHHH----HhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCcee
Q 009759          356 IGDGPYR-EELEK----MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII  430 (526)
Q Consensus       356 vG~g~~~-~~l~~----l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v  430 (526)
                      +|.+... .....    .....+|+++|+++++++.++|+.||++++|+..|++|++++|||++|+|||+++.|+..|++
T Consensus       232 ~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~  311 (365)
T cd03809         232 VGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVA  311 (365)
T ss_pred             ecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCcccee
Confidence            9975422 22222    222347999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          431 PEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       431 ~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                           +.+|++++.+|.++++++|.+++.|++.+.++++++++.+++|+|++++++++
T Consensus       312 -----~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~sw~~~~~~~~  364 (365)
T cd03809         312 -----GDAALYFDPLDPEALAAAIERLLEDPALREELRERGLARAKRFSWEKTARRTL  364 (365)
T ss_pred             -----cCceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence                 35688899999999999999999999999999999998889999999999885

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.1e-37  Score=305.97  Aligned_cols=325  Identities=19%  Similarity=0.261  Sum_probs=249.6

Q ss_pred             cEEEEEeccC-C--CCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHH
Q 009759          119 RRIALFVEPS-P--FSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       119 mkIliv~~~~-p--~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      |||+++++.+ |  .+..||.+.++..++++|.+.||+|++++..........  .........................
T Consensus         1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   78 (335)
T cd03802           1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPL--VPVVPEPLRLDAPGRDRAEAEALAL   78 (335)
T ss_pred             CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccce--eeccCCCcccccchhhHhhHHHHHH
Confidence            8999998764 1  357899999999999999999999999997664322110  0000000000001111122334456


Q ss_pred             HHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChh
Q 009759          196 IISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVA  275 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~  275 (526)
                      +.+.+++.+||+||+|......+    +++..++|+|++.|+........             ........+.++++|+.
T Consensus        79 ~~~~~~~~~~Divh~~~~~~~~~----~~~~~~~~~v~~~h~~~~~~~~~-------------~~~~~~~~~~~~~~s~~  141 (335)
T cd03802          79 AERALAAGDFDIVHNHSLHLPLP----FARPLPVPVVTTLHGPPDPELLK-------------LYYAARPDVPFVSISDA  141 (335)
T ss_pred             HHHHHhcCCCCEEEecCcccchh----hhcccCCCEEEEecCCCCcccch-------------HHHhhCcCCeEEEecHH
Confidence            77888889999999998755433    46778999999999865422111             23345678889999999


Q ss_pred             HHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCCCcEEEE
Q 009759          276 IGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAF  355 (526)
Q Consensus       276 ~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~i  355 (526)
                      .++.+...     .++.+|+||+|.+.+.+.             ..++..++|+|++.+.||++.+++++++. +++|++
T Consensus       142 ~~~~~~~~-----~~~~vi~ngvd~~~~~~~-------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~~-~~~l~i  202 (335)
T cd03802         142 QRRPWPPL-----PWVATVHNGIDLDDYPFR-------------GPKGDYLLFLGRISPEKGPHLAIRAARRA-GIPLKL  202 (335)
T ss_pred             HHhhcccc-----cccEEecCCcChhhCCCC-------------CCCCCEEEEEEeeccccCHHHHHHHHHhc-CCeEEE
Confidence            88876543     689999999999888652             34566899999999999999999998875 799999


Q ss_pred             EeCCccHHHHHHHhc-----CCCeEEecccChhhHHHHHHcCcEEEecCC-CCCCcHHHHHHHHcCCcEEEeCCCCCCce
Q 009759          356 IGDGPYREELEKMFT-----GMPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDI  429 (526)
Q Consensus       356 vG~g~~~~~l~~l~~-----~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~-~e~~~~~ilEAma~G~PvI~~~~gg~~e~  429 (526)
                      +|.|+..+.+.....     ..+|.++|+++++++..+|+.+|++++|+. .|++|++++||||||+|||+++.||..|+
T Consensus       203 ~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~  282 (335)
T cd03802         203 AGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEV  282 (335)
T ss_pred             EeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhh
Confidence            999876555444322     347999999999999999999999999998 59999999999999999999999999999


Q ss_pred             ecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 009759          430 IPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       430 v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~  493 (526)
                      +   .++.+|+++++  +++++++|.++....      .+++++.+ ++|||+.++++++ ++|+
T Consensus       283 i---~~~~~g~l~~~--~~~l~~~l~~l~~~~------~~~~~~~~~~~~s~~~~~~~~~-~~y~  335 (335)
T cd03802         283 V---EDGVTGFLVDS--VEELAAAVARADRLD------RAACRRRAERRFSAARMVDDYL-ALYR  335 (335)
T ss_pred             e---eCCCcEEEeCC--HHHHHHHHHHHhccH------HHHHHHHHHHhCCHHHHHHHHH-HHhC
Confidence            9   88889999984  999999999986543      23556666 6899999999997 7773

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.6e-37  Score=309.15  Aligned_cols=332  Identities=25%  Similarity=0.349  Sum_probs=257.5

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      |||+++...   ...||.+.++..++++|.++||+|++++....                                .+.+
T Consensus         1 MkIl~~~~~---~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~--------------------------------~~~~   45 (365)
T cd03825           1 MKVLHLNTS---DISGGAARAAYRLHRALQAAGVDSTMLVQEKK--------------------------------ALIS   45 (365)
T ss_pred             CeEEEEecC---CCCCcHHHHHHHHHHHHHhcCCceeEEEeecc--------------------------------hhhh
Confidence            899999763   55699999999999999999999999987543                                3344


Q ss_pred             HHHhcCCCEEEECCCchHHHHHHHHHHh-cCCCEEEEEecCCcccccccc----cc-----------------cccchHH
Q 009759          199 EVARFKPDIIHASSPGIMVFGALIIAKL-LCVPIVMSYHTHVPVYIPRYT----FS-----------------WLVKPMW  256 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~----~~-----------------~~~~~~~  256 (526)
                      .+++.+||+||+|......+....+.+. .++|+|+++|+.++.......    ..                 ......+
T Consensus        46 ~~~~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (365)
T cd03825          46 KIEIINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIW  125 (365)
T ss_pred             ChhcccCCEEEEEccccCccCHHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHH
Confidence            5667799999998754332222222232 499999999996543211000    00                 0111111


Q ss_pred             -HHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccc-
Q 009759          257 -LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV-  334 (526)
Q Consensus       257 -~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~-  334 (526)
                       .........++.++++|+..++.+.+.+..+..++.++|||+|.+.+.+. .....+...+. ..+..++++.|+... 
T Consensus       126 ~~~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~-~~~~~~~~~~~-~~~~~~i~~~~~~~~~  203 (365)
T cd03825         126 RRKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPR-DKREARKRLGL-PADKKIILFGAVGGTD  203 (365)
T ss_pred             HHHHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCC-cHHHHHHHhCC-CCCCeEEEEEecCCCc
Confidence             11222235678899999999999988775567899999999999887654 33444444443 345566667776654 


Q ss_pred             -cccHHHHHHHHHhC-----CCcEEEEEeCCccHHHHHHHhcCCCeEEecccC-hhhHHHHHHcCcEEEecCCCCCCcHH
Q 009759          335 -EKSLDFLKRVMDRL-----PEARIAFIGDGPYREELEKMFTGMPAVFTGMLL-GEELSQAYASGDVFVMPSESETLGLV  407 (526)
Q Consensus       335 -~Kg~~~li~a~~~l-----~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~-~~~l~~~~~~aDv~v~ps~~e~~~~~  407 (526)
                       .||++.++++++.+     ++++++++|.++.....   ....+|.++|+++ .+++..+|+.||++++||..|++|++
T Consensus       204 ~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~  280 (365)
T cd03825         204 PRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP---DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNT  280 (365)
T ss_pred             cccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc---cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHH
Confidence             89999999999876     46899999987644332   1234799999998 67899999999999999999999999


Q ss_pred             HHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHH
Q 009759          408 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRT  486 (526)
Q Consensus       408 ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~  486 (526)
                      ++|||++|+|||+++.|+..+++   .++.+|++++..|+++++++|.++++|++.+.++++++++.+ ++|||+.++++
T Consensus       281 ~~Eam~~g~PvI~~~~~~~~e~~---~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~  357 (365)
T cd03825         281 AIEALACGTPVVAFDVGGIPDIV---DHGVTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAARELAENEFDSRVQAKR  357 (365)
T ss_pred             HHHHHhcCCCEEEecCCCChhhe---eCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            99999999999999999999999   788899999999999999999999999999999999999998 58999999999


Q ss_pred             HHHHHHHH
Q 009759          487 IRNEQYNA  494 (526)
Q Consensus       487 ~~~~ly~~  494 (526)
                      ++ ++|++
T Consensus       358 ~~-~~y~~  364 (365)
T cd03825         358 YL-SLYEE  364 (365)
T ss_pred             HH-HHHhh
Confidence            97 88876

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=2.3e-37  Score=323.93  Aligned_cols=364  Identities=16%  Similarity=0.160  Sum_probs=261.6

Q ss_pred             CCCc-EEEEEeccCCCCccCchHHHHHHHHHHHHHCCC--------------eEEEEEeC--CCC--Ccc---ccCceec
Q 009759          116 SRPR-RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGD--------------EVMVVTTH--EGV--PQE---FYGAKLI  173 (526)
Q Consensus       116 ~~~m-kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~--------------~V~vi~~~--~~~--~~~---~~~~~~~  173 (526)
                      .++. ||+++...   ...||.++++..|+.+|.+.|+              .|.++...  .+.  ...   ..++.+.
T Consensus       278 ~~~~~rIl~vi~s---l~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~~~Gv~v~  354 (694)
T PRK15179        278 ESFVGPVLMINGS---LGAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLADAGIPVS  354 (694)
T ss_pred             CCCcceEEEEeCC---CCCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHHhCCCeEE
Confidence            3445 89999875   5569999999999999999954              34444321  110  100   1233333


Q ss_pred             cccccCCCcc----------cc----c-cchhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEE-EEec
Q 009759          174 GSRSFPCPWY----------QK----V-PLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVM-SYHT  237 (526)
Q Consensus       174 ~~~~~~~~~~----------~~----~-~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~-~~h~  237 (526)
                      .+...+....          .+    . .........+.+++++.+|||||+|......+ +.++++..++|+|+ +.|+
T Consensus       355 ~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~l-g~lAa~~~gvPvIv~t~h~  433 (694)
T PRK15179        355 VYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFA-CALAALLAGVPRIVLSVRT  433 (694)
T ss_pred             EeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHH-HHHHHHHcCCCEEEEEeCC
Confidence            2221111100          00    0 01233457888999999999999998765433 44556778899876 4455


Q ss_pred             CCcccccccccccccchHHHHHHH-HhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhh
Q 009759          238 HVPVYIPRYTFSWLVKPMWLVIKF-LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRL  316 (526)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~  316 (526)
                      ..+.....    .....+..+.+. ....++.++++|...++.+.+.++.+.+++.+|+||+|...|.+.......+..+
T Consensus       434 ~~~~~~~~----~~~~~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~  509 (694)
T PRK15179        434 MPPVDRPD----RYRVEYDIIYSELLKMRGVALSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMMAQF  509 (694)
T ss_pred             Cccccchh----HHHHHHHHHHHHHHhcCCeEEEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHHHhh
Confidence            33211111    111111111121 1223456777888888888776666778999999999988776432222111111


Q ss_pred             cC-CCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEEEEeCCccHHHHHHHhcCC----CeEEecccChhhHHH
Q 009759          317 SN-GEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQ  387 (526)
Q Consensus       317 ~~-~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~  387 (526)
                      .. ...+.++|+++||+.+.||++.+++++..+    ++++|+|+|+|+..+.+++++++.    +|+|.|++  +++..
T Consensus       510 ~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~--~dv~~  587 (694)
T PRK15179        510 DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLS--RRVGY  587 (694)
T ss_pred             ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCc--chHHH
Confidence            11 133567899999999999999999999764    789999999999888888887754    59999998  58999


Q ss_pred             HHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCC--HHHHHHHHHHhhhCHHHHH
Q 009759          388 AYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRE  465 (526)
Q Consensus       388 ~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d--~~~la~ai~~ll~d~~~~~  465 (526)
                      +|+.+|++|+||.+|++|++++|||+||+|||+|++||..|++   .++.+|++++++|  +++++++|.+++.+.....
T Consensus       588 ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV---~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~  664 (694)
T PRK15179        588 WLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAV---QEGVTGLTLPADTVTAPDVAEALARIHDMCAADP  664 (694)
T ss_pred             HHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHc---cCCCCEEEeCCCCCChHHHHHHHHHHHhChhccH
Confidence            9999999999999999999999999999999999999999999   8999999998776  4689999988888766667


Q ss_pred             HHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 009759          466 TMGQAARQEM-EKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       466 ~~~~~a~~~~-~~fs~~~~~~~~~~~ly~  493 (526)
                      .+++++++.+ ++|||+.++++++ ++|+
T Consensus       665 ~l~~~ar~~a~~~FS~~~~~~~~~-~lY~  692 (694)
T PRK15179        665 GIARKAADWASARFSLNQMIASTV-RCYQ  692 (694)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHH-HHhC
Confidence            7888999998 5899999999997 8885

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.6e-37  Score=313.63  Aligned_cols=357  Identities=18%  Similarity=0.218  Sum_probs=256.4

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc----ccCceeccccccCCCccccccchhc--
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE----FYGAKLIGSRSFPCPWYQKVPLSLA--  191 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--  191 (526)
                      +.||++++..     .+|.+.++..+++.|+++||+|++++........    ..++.+..+...+ .........+.  
T Consensus         3 ~~~~~~~~~~-----~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~   76 (415)
T cd03816           3 RKRVCVLVLG-----DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPPPP-QRLNKLPFLLFAP   76 (415)
T ss_pred             ccEEEEEEec-----ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhcCCCEEEEECCCCc-cccccchHHHHHH
Confidence            4577777653     2677788899999999999999999976543221    1222222222111 00111111110  


Q ss_pred             ------ccHHHHHHHHhcCCCEEEECCCchH--HHHHHHHHHhcCCCEEEEEecCCccccccc--ccccccchHHHHHHH
Q 009759          192 ------LSPRIISEVARFKPDIIHASSPGIM--VFGALIIAKLLCVPIVMSYHTHVPVYIPRY--TFSWLVKPMWLVIKF  261 (526)
Q Consensus       192 ------~~~~l~~~l~~~~pDiV~~~~~~~~--~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~--~~~~~~~~~~~~~~~  261 (526)
                            ....+..+++..+||+||+|.+...  ...+.++++..++|+|+++|+.+.......  ......+...++++.
T Consensus        77 ~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~  156 (415)
T cd03816          77 LKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKL  156 (415)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHHHHH
Confidence                  1112222455678999999875432  233555677789999999998653211110  112223455677888


Q ss_pred             HhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHh----------------hcCCCCCCcE
Q 009759          262 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWR----------------LSNGEPDKPL  325 (526)
Q Consensus       262 ~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~----------------~~~~~~~~~~  325 (526)
                      +++.+|.++++|+.+++.+.+ ++.+.+++.+|+||. ...|.+..........                .....++..+
T Consensus       157 ~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  234 (415)
T cd03816         157 FGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRP-PEQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPAL  234 (415)
T ss_pred             HhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCC-HHHceeCcHHHHHHHHHhccccccccccccccceecCCCceE
Confidence            999999999999999999987 445789999999995 4455554322111110                0112334567


Q ss_pred             EEEEecccccccHHHHHHHHHhC----------CCcEEEEEeCCccHHHHHHHhcCC---CeEEe-cccChhhHHHHHHc
Q 009759          326 IVHVGRLGVEKSLDFLKRVMDRL----------PEARIAFIGDGPYREELEKMFTGM---PAVFT-GMLLGEELSQAYAS  391 (526)
Q Consensus       326 i~~vG~l~~~Kg~~~li~a~~~l----------~~~~l~ivG~g~~~~~l~~l~~~~---~V~~~-g~v~~~~l~~~~~~  391 (526)
                      ++++||+.+.||++.+++|++.+          ++++|+|+|+|+..+++++++++.   ++.+. |+++.+++.++|++
T Consensus       235 i~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~  314 (415)
T cd03816         235 LVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLAS  314 (415)
T ss_pred             EEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHh
Confidence            88899999999999999999875          469999999999999998888755   45554 68999999999999


Q ss_pred             CcEEEecCC---CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhC---HHHHH
Q 009759          392 GDVFVMPSE---SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN---QELRE  465 (526)
Q Consensus       392 aDv~v~ps~---~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d---~~~~~  465 (526)
                      ||++++|+.   .+++|++++||||||+|||+++.||..|++   +++.+|++++  |+++++++|.++++|   ++.++
T Consensus       315 aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv---~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~  389 (415)
T cd03816         315 ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELV---KHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLN  389 (415)
T ss_pred             CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHh---cCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHH
Confidence            999997532   478999999999999999999999999999   8999999995  999999999999999   99999


Q ss_pred             HHHHHHHHHHHhCCHHHHHHHHH
Q 009759          466 TMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       466 ~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      +|++++++.. +++|+....+.+
T Consensus       390 ~m~~~~~~~~-~~~~~~~~~~~~  411 (415)
T cd03816         390 SLKKGAQEES-ELRWDENWDRVV  411 (415)
T ss_pred             HHHHHHHHhh-hcCHHHHHHHHh
Confidence            9999999887 667766655543

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.1e-37  Score=308.14  Aligned_cols=343  Identities=24%  Similarity=0.336  Sum_probs=264.6

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccc------cCCCccc-----cccc
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRS------FPCPWYQ-----KVPL  188 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------~~~~~~~-----~~~~  188 (526)
                      ||++++..+|....||++.++.+++++|.++||+|++++...................      .......     ....
T Consensus         1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (359)
T cd03823           1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDYD   80 (359)
T ss_pred             CeeEEcccCCcccccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccccceeeccccccccCCCchhhhhHHHhcc
Confidence            6899998877666799999999999999999999999997654332221111100000      0000000     0011


Q ss_pred             hhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcE
Q 009759          189 SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADL  268 (526)
Q Consensus       189 ~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  268 (526)
                      .......+.+.+++.+||+||++.+..........++..++|+++++|+.+.....              ........|.
T Consensus        81 ~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~--------------~~~~~~~~d~  146 (359)
T cd03823          81 NPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPR--------------QGLFKKGGDA  146 (359)
T ss_pred             CHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecch--------------hhhhccCCCE
Confidence            12234567788888999999999875554444555677789999999986532111              1111223399


Q ss_pred             EEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC
Q 009759          269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL  348 (526)
Q Consensus       269 ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l  348 (526)
                      ++++|+...+.+.+.+. ...++.+++||+|...+.+...         ....++.+++++|++.+.||++.++++++.+
T Consensus       147 ii~~s~~~~~~~~~~~~-~~~~~~vi~n~~~~~~~~~~~~---------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l  216 (359)
T cd03823         147 VIAPSRFLLDRYVANGL-FAEKISVIRNGIDLDRAKRPRR---------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRL  216 (359)
T ss_pred             EEEeCHHHHHHHHHcCC-CccceEEecCCcChhhcccccc---------CCCCCceEEEEEecCccccCHHHHHHHHHHH
Confidence            99999999999988775 3579999999999988765422         0245678899999999999999999999988


Q ss_pred             C--CcEEEEEeCCccHHHHHHHh-cCCCeEEecccChhhHHHHHHcCcEEEecCC-CCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          349 P--EARIAFIGDGPYREELEKMF-TGMPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       349 ~--~~~l~ivG~g~~~~~l~~l~-~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~-~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      .  +++|+++|.+.......... ...+|.++|+++.+++.++|+.||++++|+. .|++|++++|||++|+|||+++.+
T Consensus       217 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~  296 (359)
T cd03823         217 PRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIG  296 (359)
T ss_pred             HhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC
Confidence            5  89999999886555443322 2347999999999999999999999999998 799999999999999999999999


Q ss_pred             CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 009759          425 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       425 g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~  493 (526)
                      +..+++   .++.+|++++++|+++++++|.++++|++.++++++++++..+.   +.++++++ ++|+
T Consensus       297 ~~~e~i---~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~  358 (359)
T cd03823         297 GMAELV---RDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAGIEPPRSI---EDQAEEYL-KLYR  358 (359)
T ss_pred             CHHHHh---cCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHhHHHhhhH---HHHHHHHH-HHhh
Confidence            999999   88889999999999999999999999999999999998877644   88888886 6775

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=7.2e-37  Score=306.55  Aligned_cols=358  Identities=32%  Similarity=0.486  Sum_probs=281.7

Q ss_pred             EEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCcee-------ccccccCCCccccccchhccc
Q 009759          121 IALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKL-------IGSRSFPCPWYQKVPLSLALS  193 (526)
Q Consensus       121 Iliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  193 (526)
                      ||++++.+|....||++.++..++++|.+.||+|++++..............       .....................
T Consensus         1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (377)
T cd03798           1 ILVISSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAA   80 (377)
T ss_pred             CeEeccCCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHHH
Confidence            5788887765447999999999999999999999999976543322211100       000000111111122233445


Q ss_pred             HHHHHHHH--hcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEe
Q 009759          194 PRIISEVA--RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  271 (526)
Q Consensus       194 ~~l~~~l~--~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  271 (526)
                      ..+.+.++  ..++|+||++......+......+..++|++++.|+..........      ......+..++.+|.+++
T Consensus        81 ~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~~~~~~d~ii~  154 (377)
T cd03798          81 RALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR------LLRALLRRALRRADAVIA  154 (377)
T ss_pred             HHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh------hHHHHHHHHHhcCCeEEe
Confidence            56777887  8899999999766666666677788889999999997654322211      345677888999999999


Q ss_pred             CChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC---
Q 009759          272 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---  348 (526)
Q Consensus       272 ~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l---  348 (526)
                      +|+..++.+.+.+ .+..++.+++||+|...+.+......  .+.. ...+.+.++++|++.+.||++.++++++.+   
T Consensus       155 ~s~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~  230 (377)
T cd03798         155 VSEALADELKALG-IDPEKVTVIPNGVDTERFSPADRAEA--RKLG-LPEDKKVILFVGRLVPRKGIDYLIEALARLLKK  230 (377)
T ss_pred             CCHHHHHHHHHhc-CCCCceEEcCCCcCcccCCCcchHHH--Hhcc-CCCCceEEEEeccCccccCHHHHHHHHHHHHhc
Confidence            9999999999876 46789999999999988876533221  1111 245678899999999999999999999887   


Q ss_pred             -CCcEEEEEeCCccHHHHHHHhc----CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCC
Q 009759          349 -PEARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  423 (526)
Q Consensus       349 -~~~~l~ivG~g~~~~~l~~l~~----~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~  423 (526)
                       ++++++++|.++..+.+++.++    ..+|.+.|+++++++.++|++||++++|+..|++|++++|||++|+|||+++.
T Consensus       231 ~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~  310 (377)
T cd03798         231 RPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDV  310 (377)
T ss_pred             CCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecC
Confidence             3799999999887777777765    23799999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q 009759          424 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       424 gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~  494 (526)
                      ++..+++   .++.+|++++++|+++++++|.+++++++.  ++.+++++.+ ++|+|+..++++. ++|++
T Consensus       311 ~~~~~~~---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~  376 (377)
T cd03798         311 GGIPEII---TDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLL-ELYRE  376 (377)
T ss_pred             CChHHHh---cCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHH-HHHhh
Confidence            9999999   888889999999999999999999999887  6777777777 6899999999997 67765

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.3e-37  Score=311.13  Aligned_cols=361  Identities=24%  Similarity=0.350  Sum_probs=274.4

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc----------cCceeccccccCCCcc---ccc
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF----------YGAKLIGSRSFPCPWY---QKV  186 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~----------~~~~~~~~~~~~~~~~---~~~  186 (526)
                      ||+++++.++ +..||.+.++..++++|+++||+|++++.........          .+..............   ...
T Consensus         1 kIl~i~~~~~-~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (394)
T cd03794           1 KILILSQYFP-PELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYKKNGLLKRL   79 (394)
T ss_pred             CEEEEecccC-CccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCCccchHHHH
Confidence            6899998776 4449999999999999999999999999765432221          2222222222111110   011


Q ss_pred             cchhcccHHHHHHHH--hcCCCEEEECCCc-hHHHHHHHHHHhcCCCEEEEEecCCccccccccc---ccc-cchHHHHH
Q 009759          187 PLSLALSPRIISEVA--RFKPDIIHASSPG-IMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTF---SWL-VKPMWLVI  259 (526)
Q Consensus       187 ~~~~~~~~~l~~~l~--~~~pDiV~~~~~~-~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~---~~~-~~~~~~~~  259 (526)
                      .....+.......+.  ..+||+||++.+. .........++..++|+++++|+.++........   ... .+....++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (394)
T cd03794          80 LNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLE  159 (394)
T ss_pred             HhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHH
Confidence            112222233333443  7799999999843 3344455566667999999999976543322111   111 13455678


Q ss_pred             HHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHH
Q 009759          260 KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLD  339 (526)
Q Consensus       260 ~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~  339 (526)
                      +..++.+|.++++|+..++.+... +.+..++.+++||++...+.+...... +.... ...++..++++|++...||++
T Consensus       160 ~~~~~~~d~vi~~s~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~~~G~~~~~k~~~  236 (394)
T cd03794         160 RLIYRRADAIVVISPGMREYLVRR-GVPPEKISVIPNGVDLELFKPPPADES-LRKEL-GLDDKFVVLYAGNIGRAQGLD  236 (394)
T ss_pred             HHHHhcCCEEEEECHHHHHHHHhc-CCCcCceEEcCCCCCHHHcCCccchhh-hhhcc-CCCCcEEEEEecCcccccCHH
Confidence            888999999999999999998843 346789999999999887765533221 22221 245678899999999999999


Q ss_pred             HHHHHHHhCC---CcEEEEEeCCccHHHHHHHhc---CCCeEEecccChhhHHHHHHcCcEEEecCCCCCC-----cHHH
Q 009759          340 FLKRVMDRLP---EARIAFIGDGPYREELEKMFT---GMPAVFTGMLLGEELSQAYASGDVFVMPSESETL-----GLVV  408 (526)
Q Consensus       340 ~li~a~~~l~---~~~l~ivG~g~~~~~l~~l~~---~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~-----~~~i  408 (526)
                      .++++++.+.   +++|+++|.|+..+.+.+++.   ..+|.++|+++.+++.++|+.||++++|+..|++     |+++
T Consensus       237 ~l~~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~  316 (394)
T cd03794         237 TLLEAAALLKDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKL  316 (394)
T ss_pred             HHHHHHHHHhhcCCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHH
Confidence            9999998873   799999999988877777433   2379999999999999999999999999997765     8899


Q ss_pred             HHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHH-hCCHHHHHHHH
Q 009759          409 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTI  487 (526)
Q Consensus       409 lEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~-~fs~~~~~~~~  487 (526)
                      +|||++|+|||+++.++..+.+   .++.+|++++.+|+++++++|.+++.|++.++++++++++.++ +|+|+.+++++
T Consensus       317 ~Ea~~~G~pvi~~~~~~~~~~~---~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  393 (394)
T cd03794         317 FEYMAAGKPVLASVDGESAELV---EEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGENGRRYVEEKFSREKLAERL  393 (394)
T ss_pred             HHHHHCCCcEEEecCCCchhhh---ccCCcceEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence            9999999999999999999999   7778999999999999999999999999999999999999995 89999999876

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=100.00  E-value=3.2e-37  Score=308.18  Aligned_cols=341  Identities=19%  Similarity=0.203  Sum_probs=252.6

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHC--CCeEEEEEeCCCCCccc-cCceec-cccccCCCccccccchhcccH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQEF-YGAKLI-GSRSFPCPWYQKVPLSLALSP  194 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~  194 (526)
                      |||+++.+.  ++..||.++++.+++++|.+.  ||+|.+++......... ...... ...........    ......
T Consensus         1 mkI~~~~~~--~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~   74 (359)
T PRK09922          1 MKIAFIGEA--VSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKAWLKEIKYAQSFSNIKLSFLR----RAKHVY   74 (359)
T ss_pred             CeeEEeccc--ccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChHHHHhcchhcccccchhhhhc----ccHHHH
Confidence            899999874  345699999999999999999  89999988755422111 111100 00011111111    122345


Q ss_pred             HHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCC--EEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeC
Q 009759          195 RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVP--IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  272 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  272 (526)
                      .+.+++++.+||+||+|.+... +.+..+++..+.|  ++.+.|......       ..      .....+..+|.++++
T Consensus        75 ~l~~~l~~~~~Dii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~~~~-------~~------~~~~~~~~~d~~i~~  140 (359)
T PRK09922         75 NFSKWLKETQPDIVICIDVISC-LYANKARKKSGKQFKIFSWPHFSLDHK-------KH------AECKKITCADYHLAI  140 (359)
T ss_pred             HHHHHHHhcCCCEEEEcCHHHH-HHHHHHHHHhCCCCeEEEEecCccccc-------ch------hhhhhhhcCCEEEEc
Confidence            7778999999999999986433 3334445555655  444455422110       00      011123789999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEeccc--ccccHHHHHHHHHhC-C
Q 009759          273 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG--VEKSLDFLKRVMDRL-P  349 (526)
Q Consensus       273 S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~--~~Kg~~~li~a~~~l-~  349 (526)
                      |+..++.+.+.+ .+.+++.+++||+|.+.+.....          ...++++++++||+.  .+||++.+++++..+ +
T Consensus       141 S~~~~~~~~~~~-~~~~ki~vi~N~id~~~~~~~~~----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~  209 (359)
T PRK09922        141 SSGIKEQMMARG-ISAQRISVIYNPVEIKTIIIPPP----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTTG  209 (359)
T ss_pred             CHHHHHHHHHcC-CCHHHEEEEcCCCCHHHccCCCc----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhCC
Confidence            999999998764 46678999999999654432111          123567899999986  469999999999888 4


Q ss_pred             CcEEEEEeCCccHHHHHHHhcCC----CeEEecccCh--hhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeC-
Q 009759          350 EARIAFIGDGPYREELEKMFTGM----PAVFTGMLLG--EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR-  422 (526)
Q Consensus       350 ~~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~--~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~-  422 (526)
                      +++|+++|+|+..+.+++++++.    +|.|+|++++  +++.++|+.+|++|+||..||+|++++||||||+|||+++ 
T Consensus       210 ~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~  289 (359)
T PRK09922        210 EWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDC  289 (359)
T ss_pred             CeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCC
Confidence            79999999999888888887643    6999999854  7889999999999999999999999999999999999999 


Q ss_pred             CCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 009759          423 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  496 (526)
Q Consensus       423 ~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l  496 (526)
                      .||..|++   .++.+|++++++|+++++++|.++++|++.+.  .....+.+++|+-+...+++. ++|..++
T Consensus       290 ~~g~~eiv---~~~~~G~lv~~~d~~~la~~i~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  357 (359)
T PRK09922        290 MSGPRDII---KPGLNGELYTPGNIDEFVGKLNKVISGEVKYQ--HDAIPNSIERFYEVLYFKNLN-NALFSKL  357 (359)
T ss_pred             CCChHHHc---cCCCceEEECCCCHHHHHHHHHHHHhCcccCC--HHHHHHHHHHhhHHHHHHHHH-HHHHHHh
Confidence            89999999   88999999999999999999999999987542  223334457888899999996 7777665

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=100.00  E-value=1.2e-36  Score=304.61  Aligned_cols=348  Identities=22%  Similarity=0.323  Sum_probs=262.5

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      ||++++..   ...||++..+.++++.|.+.||+|++++........... .....  ............+.....+.++
T Consensus         1 ~il~~~~~---~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~   74 (360)
T cd04951           1 KILYVITG---LGLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-DATII--LNLNMSKNPLSFLLALWKLRKI   74 (360)
T ss_pred             CeEEEecC---CCCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-hccce--EEecccccchhhHHHHHHHHHH
Confidence            57888654   356999999999999999999999999865432221111 00000  0111111111122334567778


Q ss_pred             HHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHH
Q 009759          200 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD  279 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~  279 (526)
                      +++.+||+||+|......+..+......+.+++++.|+....          ........+.....++.++++|+...+.
T Consensus        75 ~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~----------~~~~~~~~~~~~~~~~~~~~~s~~~~~~  144 (360)
T cd04951          75 LRQFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEG----------GRLRMLAYRLTDFLSDLTTNVSKEALDY  144 (360)
T ss_pred             HHhcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCch----------hHHHHHHHHHHhhccCceEEEcHHHHHH
Confidence            888999999999865443333332234577899999975421          1112234455666788899999999999


Q ss_pred             HHHhcccCCCcEEEeecCCCCCCCCCCcc-cHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEE
Q 009759          280 LEAARVTAANKIRIWKKGVDSESFHPRFR-SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIA  354 (526)
Q Consensus       280 l~~~~~~~~~ki~vi~ngid~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~  354 (526)
                      +.+.+..+..++.++|||+|...+.+... ....+..++. .+++++++++|++.+.||++.+++++.++    ++++|+
T Consensus       145 ~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~  223 (360)
T cd04951         145 FIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGV-KNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLL  223 (360)
T ss_pred             HHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcCc-CCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEE
Confidence            98887667789999999999887765422 2233444433 45678899999999999999999999876    479999


Q ss_pred             EEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCcee
Q 009759          355 FIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII  430 (526)
Q Consensus       355 ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v  430 (526)
                      |+|+|+..+++++.+.+.    +|.+.|++  +++..+|+.||++++||..|++|++++|||++|+|||+++.|+..|++
T Consensus       224 i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i  301 (360)
T cd04951         224 IAGDGPLRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVV  301 (360)
T ss_pred             EEcCCCcHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEe
Confidence            999999888887776543    69999987  689999999999999999999999999999999999999999999999


Q ss_pred             cccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 009759          431 PEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEM-EKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       431 ~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~  493 (526)
                         ++  +|++++++|+++++++|.++++ +++.++.++++ ++.+ ++|+|+.+++++. ++|+
T Consensus       302 ---~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~-~~y~  359 (360)
T cd04951         302 ---GD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWL-TLYT  359 (360)
T ss_pred             ---cC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHH-HHhh
Confidence               54  7888999999999999999994 66666667666 6666 6899999999997 7885

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=8.7e-37  Score=306.35  Aligned_cols=357  Identities=25%  Similarity=0.322  Sum_probs=261.8

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCcee---ccccccCCCccccccchhcccHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKL---IGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      ||++++..++ +..||++.++..++++|.+.||+|++++..............   ........................
T Consensus         1 kIl~i~~~~~-~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (375)
T cd03821           1 KILHVIPSFD-PKYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALNGVPVKLFSINVAYGLNLARYLFPPSLLA   79 (375)
T ss_pred             CeEEEcCCCC-cccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhccCceeeecccchhhhhhhhhhccChhHHH
Confidence            6889988765 788999999999999999999999999976543322111100   000000000000111111112223


Q ss_pred             HHHHHhcCCCEEEECCC-chHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccc--hHHHHHHHHhhcCcEEEeCC
Q 009759          197 ISEVARFKPDIIHASSP-GIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVK--PMWLVIKFLHRAADLTLVPS  273 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~-~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ad~ii~~S  273 (526)
                      .......++|+||+++. ..........++..++|++++.|+........  .....+  ......+..++.++.+++.|
T Consensus        80 ~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~s  157 (375)
T cd03821          80 WLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALP--HKALKKRLAWFLFERRLLQAAAAVHATS  157 (375)
T ss_pred             HHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccc--cchhhhHHHHHHHHHHHHhcCCEEEECC
Confidence            33344568999999984 33344455566778999999999875543211  111111  11234567788899999999


Q ss_pred             hhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----C
Q 009759          274 VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P  349 (526)
Q Consensus       274 ~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~  349 (526)
                      ...........  ...++.++|||+|.+.+.+...... +.... ...++++++++|++.+.||++.+++++..+    +
T Consensus       158 ~~~~~~~~~~~--~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~  233 (375)
T cd03821         158 EQEAAEIRRLG--LKAPIAVIPNGVDIPPFAALPSRGR-RRKFP-ILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFP  233 (375)
T ss_pred             HHHHHHHHhhC--CcccEEEcCCCcChhccCcchhhhh-hhhcc-CCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcC
Confidence            88777776554  4578999999999988865432222 23332 256778999999999999999999999887    4


Q ss_pred             CcEEEEEeCCc--cHHHHHHHhc----CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCC
Q 009759          350 EARIAFIGDGP--YREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  423 (526)
Q Consensus       350 ~~~l~ivG~g~--~~~~l~~l~~----~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~  423 (526)
                      +++|+++|.+.  ....++.++.    ..+|.++|+++++++..+|+.||++|+||..|++|++++|||++|+|||+++.
T Consensus       234 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~  313 (375)
T cd03821         234 DWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDK  313 (375)
T ss_pred             CeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCC
Confidence            79999999753  3344443322    23699999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 009759          424 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  488 (526)
Q Consensus       424 gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~  488 (526)
                      ++..+++   .+ ..|++++. +.++++++|.+++++++.++++++++++.+ ++|+|+.++++++
T Consensus       314 ~~~~~~~---~~-~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  374 (375)
T cd03821         314 VPWQELI---EY-GCGWVVDD-DVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL  374 (375)
T ss_pred             CCHHHHh---hc-CceEEeCC-ChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence            9999999   66 78888765 559999999999999999999999999996 7999999999875

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=100.00  E-value=3.7e-37  Score=309.61  Aligned_cols=342  Identities=17%  Similarity=0.262  Sum_probs=245.8

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccC-cee---c-cccccCCCccccccchhcccH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYG-AKL---I-GSRSFPCPWYQKVPLSLALSP  194 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~-~~~---~-~~~~~~~~~~~~~~~~~~~~~  194 (526)
                      ||+++++.   ...||.+.++.++++.|.+.||+|++++....... +.. ...   . +... .++  ....  ..+..
T Consensus         1 ki~~~~~~---~~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~g~~~-~~~--~~~~--~~~~~   71 (372)
T cd03792           1 KVLHVNST---PYGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPEF-FNVTKKFHNALQGADI-ELS--EEEK--EIYLE   71 (372)
T ss_pred             CeEEEeCC---CCCCcHHHHHHHHHHHHHHcCCCceEEecCCChhH-HHHHHHhhHhhcCCCC-CCC--HHHH--HHHHH
Confidence            68899875   35699999999999999999999999987553211 110 000   1 1111 111  0000  01111


Q ss_pred             HHHH----HHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEE
Q 009759          195 RIIS----EVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  270 (526)
Q Consensus       195 ~l~~----~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  270 (526)
                      ....    .+...+||+||+|++....+  ..+.+..++|+|++.|.......         ...+...+..++.+|.++
T Consensus        72 ~~~~~~~~~~~~~~~Dvv~~h~~~~~~~--~~~~~~~~~~~i~~~H~~~~~~~---------~~~~~~~~~~~~~~d~~i  140 (372)
T cd03792          72 WNEENAERPLLDLDADVVVIHDPQPLAL--PLFKKKRGRPWIWRCHIDLSSPN---------RRVWDFLQPYIEDYDAAV  140 (372)
T ss_pred             HHHHHhccccccCCCCEEEECCCCchhH--HHhhhcCCCeEEEEeeeecCCCc---------HHHHHHHHHHHHhCCEEe
Confidence            1111    23366899999998764322  22233348999999998653211         122334566778899999


Q ss_pred             eCChhHHHHHHHhcccCCCcEEEeecCCCCCC-CCCCc---ccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHH
Q 009759          271 VPSVAIGKDLEAARVTAANKIRIWKKGVDSES-FHPRF---RSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD  346 (526)
Q Consensus       271 ~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~-~~~~~---~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~  346 (526)
                      +.+...   . ..+ ....++ ++|||+|... +....   .....+.+++. .+++++|+++||+.+.||++.++++++
T Consensus       141 ~~~~~~---~-~~~-~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~vgrl~~~Kg~~~ll~a~~  213 (372)
T cd03792         141 FHLPEY---V-PPQ-VPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYGI-DPERPYITQVSRFDPWKDPFGVIDAYR  213 (372)
T ss_pred             ecHHHh---c-CCC-CCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhCC-CCCCcEEEEEeccccccCcHHHHHHHH
Confidence            888322   2 222 234455 9999999753 21111   12234445544 467889999999999999999999987


Q ss_pred             hC----CCcEEEEEeCCccH-----HHHHHHhc----CCCeEEeccc--ChhhHHHHHHcCcEEEecCCCCCCcHHHHHH
Q 009759          347 RL----PEARIAFIGDGPYR-----EELEKMFT----GMPAVFTGML--LGEELSQAYASGDVFVMPSESETLGLVVLEA  411 (526)
Q Consensus       347 ~l----~~~~l~ivG~g~~~-----~~l~~l~~----~~~V~~~g~v--~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEA  411 (526)
                      .+    ++++|+++|+|+..     +.++++.+    ..+|.+.|..  +++++..+|+.||++++||..||+|++++||
T Consensus       214 ~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA  293 (372)
T cd03792         214 KVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEA  293 (372)
T ss_pred             HHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHH
Confidence            65    67999999987531     12333321    2368999986  7889999999999999999999999999999


Q ss_pred             HHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHH
Q 009759          412 MSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNE  490 (526)
Q Consensus       412 ma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~  490 (526)
                      ||||+|||+++.+|..+.+   .++.+|++++  +.++++++|.+++.|++.+++|++++++.+ ++|+|+.++++++ +
T Consensus       294 ~a~G~Pvv~s~~~~~~~~i---~~~~~g~~~~--~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~-~  367 (372)
T cd03792         294 LWKGKPVIAGPVGGIPLQI---EDGETGFLVD--TVEEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYL-Y  367 (372)
T ss_pred             HHcCCCEEEcCCCCchhhc---ccCCceEEeC--CcHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHH-H
Confidence            9999999999999999999   8899999987  677899999999999999999999999998 6899999999998 7


Q ss_pred             HHHH
Q 009759          491 QYNA  494 (526)
Q Consensus       491 ly~~  494 (526)
                      +|++
T Consensus       368 ~~~~  371 (372)
T cd03792         368 LISK  371 (372)
T ss_pred             HHHh
Confidence            8875

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=1.7e-37  Score=314.52  Aligned_cols=354  Identities=20%  Similarity=0.222  Sum_probs=257.8

Q ss_pred             EEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc--ccCce--eccccccCCC-----------cccc
Q 009759          121 IALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE--FYGAK--LIGSRSFPCP-----------WYQK  185 (526)
Q Consensus       121 Iliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~--~~~~~--~~~~~~~~~~-----------~~~~  185 (526)
                      ||++++..|+|..+|+..++++++++|++. |+|++++......+.  .....  ...+...+.+           ....
T Consensus         1 iL~~~~~~P~P~~~G~~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (397)
T TIGR03087         1 ILYLVHRIPYPPNKGDKIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRPLCEEVCVVPLDPRVARLRSLLGLLTG   79 (397)
T ss_pred             CeeecCCCCCCCCCCCcEeHHHHHHHHHhc-CcEEEEEeCCCcccHHHHHHHHHHhheeEEeecCcHHHHHHHHhhhcCC
Confidence            689999999999999999999999999876 999999976432211  00000  0000011100           0000


Q ss_pred             ------ccchhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccc------cccc--
Q 009759          186 ------VPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYT------FSWL--  251 (526)
Q Consensus       186 ------~~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~------~~~~--  251 (526)
                            ..........+.+.+++.++|+||++......+   ...+..++|+|++.||..........      ..+.  
T Consensus        80 ~p~~~~~~~~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~---~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~  156 (397)
T TIGR03087        80 EPLSLPYYRSRRLARWVNALLAAEPVDAIVVFSSAMAQY---VTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYR  156 (397)
T ss_pred             CCCcchhhCCHHHHHHHHHHHhhCCCCEEEEecccccee---ccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHH
Confidence                  111122344566677778999999987533221   11135689999999985432211110      1111  


Q ss_pred             --cchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEE
Q 009759          252 --VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHV  329 (526)
Q Consensus       252 --~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v  329 (526)
                        .+....+++.+++.+|.++++|+..++.+.+.++....++.++|||+|.+.|.+......     . ...+..+++|+
T Consensus       157 ~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~-----~-~~~~~~~ilf~  230 (397)
T TIGR03087       157 REGRLLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPN-----P-YPPGKRVLVFT  230 (397)
T ss_pred             HHHHHHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccC-----C-CCCCCcEEEEE
Confidence              112335778899999999999999999998876545678999999999998865422110     0 12346789999


Q ss_pred             ecccccccHHHHHHH----HH----hCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCC-
Q 009759          330 GRLGVEKSLDFLKRV----MD----RLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-  400 (526)
Q Consensus       330 G~l~~~Kg~~~li~a----~~----~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~-  400 (526)
                      |++.+.||++.++++    +.    ..|+++|+|+|+|+. +.++++....+|+++|+++  ++..+|+.||++|+||. 
T Consensus       231 G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-~~~~~l~~~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~  307 (397)
T TIGR03087       231 GAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-PAVRALAALPGVTVTGSVA--DVRPYLAHAAVAVAPLRI  307 (397)
T ss_pred             EecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-HHHHHhccCCCeEEeeecC--CHHHHHHhCCEEEecccc
Confidence            999999999988743    32    347899999999875 4566666666899999995  78999999999999997 


Q ss_pred             CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCC
Q 009759          401 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYD  479 (526)
Q Consensus       401 ~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs  479 (526)
                      .||+|++++||||+|+|||+++.++.. +.   ..+++|+++. +|+++++++|.++++|++.+++|++++++.+ ++||
T Consensus       308 ~eG~~~~~lEAma~G~PVV~t~~~~~~-i~---~~~~~g~lv~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fs  382 (397)
T TIGR03087       308 ARGIQNKVLEAMAMAKPVVASPEAAEG-ID---ALPGAELLVA-ADPADFAAAILALLANPAEREELGQAARRRVLQHYH  382 (397)
T ss_pred             cCCcccHHHHHHHcCCCEEecCccccc-cc---ccCCcceEeC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCC
Confidence            599999999999999999999976432 33   3445788886 7999999999999999999999999999998 5899


Q ss_pred             HHHHHHHHHHHHHH
Q 009759          480 WRAATRTIRNEQYN  493 (526)
Q Consensus       480 ~~~~~~~~~~~ly~  493 (526)
                      |+..++++. ++|+
T Consensus       383 w~~~~~~~~-~~l~  395 (397)
T TIGR03087       383 WPRNLARLD-ALLE  395 (397)
T ss_pred             HHHHHHHHH-HHhc
Confidence            999999996 6664

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=9.3e-37  Score=305.41  Aligned_cols=337  Identities=21%  Similarity=0.254  Sum_probs=249.0

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      ||+++++.   ...||.+.++.+++++|.+.||+|++++...............+...+..+.  ...........+.+.
T Consensus         1 kIl~~~~~---~~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   75 (358)
T cd03812           1 KILHIVGT---MNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIPA--RKKNPLKYFKKLYKL   75 (358)
T ss_pred             CEEEEeCC---CCCccHHHHHHHHHHhcCccceEEEEEEeCCCCcchHHHHHHcCCeEEEecC--CCccHHHHHHHHHHH
Confidence            68888774   2789999999999999999999999999865432111111111121111111  111223334566677


Q ss_pred             HHhcCCCEEEECCCchHHHHHHHHHHhcCCCE-EEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHH
Q 009759          200 VARFKPDIIHASSPGIMVFGALIIAKLLCVPI-VMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGK  278 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~-v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~  278 (526)
                      +++.+||+||+|......+.. .+.+..+.|. +++.|+.........   .. .......+.+.+.+|.++++|+..++
T Consensus        76 ~~~~~~Dvv~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~i~~s~~~~~  150 (358)
T cd03812          76 IKKNKYDIVHVHGSSASGFIL-LAAKKAGVKVRIAHSHNTSDSHDKKK---KI-LKYKVLRKLINRLATDYLACSEEAGK  150 (358)
T ss_pred             HhcCCCCEEEEeCcchhHHHH-HHHhhCCCCeEEEEeccccccccccc---hh-hHHHHHHHHHHhcCCEEEEcCHHHHH
Confidence            788999999999876444433 3344466665 566676442211111   00 00134567788899999999999999


Q ss_pred             HHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEE
Q 009759          279 DLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIA  354 (526)
Q Consensus       279 ~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~  354 (526)
                      .+...  ....++.+||||+|.+.+.+.......+.... ...++++|+|+|++.+.||++.+++++..+    ++++++
T Consensus       151 ~~~~~--~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~-~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~  227 (358)
T cd03812         151 WLFGK--VKNKKFKVIPNGIDLEKFIFNEEIRKKRRELG-ILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLL  227 (358)
T ss_pred             HHHhC--CCcccEEEEeccCcHHHcCCCchhhhHHHHcC-CCCCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEE
Confidence            88776  25679999999999987765433222233332 256788999999999999999999999887    589999


Q ss_pred             EEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCcee
Q 009759          355 FIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII  430 (526)
Q Consensus       355 ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v  430 (526)
                      |+|+|+..+.+++.+++.    +|.++|+  .+++.++|+.||++|+||..|++|++++||||+|+|||+++.||..+++
T Consensus       228 ivG~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i  305 (358)
T cd03812         228 LVGDGELEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDL  305 (358)
T ss_pred             EEeCCchHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhh
Confidence            999999888887776543    6999999  4789999999999999999999999999999999999999999999999


Q ss_pred             cccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH
Q 009759          431 PEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  475 (526)
Q Consensus       431 ~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~  475 (526)
                         .+ ..|++...+++++++++|.++++|++.++.+...+....
T Consensus       306 ---~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~  346 (358)
T cd03812         306 ---TD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGL  346 (358)
T ss_pred             ---cc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccc
Confidence               66 456666777899999999999999999888877665544

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=8.3e-36  Score=298.97  Aligned_cols=343  Identities=24%  Similarity=0.290  Sum_probs=254.1

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      ||+|++...  +..||.+.++.+++++|.+.||+|.+++................       ..............+.+.
T Consensus         1 kI~~v~~~~--~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~   71 (366)
T cd03822           1 RIALVSPYP--PRKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEV-------VRVIVLDNPLDYRRAARA   71 (366)
T ss_pred             CeEEecCCC--CCCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCCCcccc-------eeeeecCCchhHHHHHHH
Confidence            788997642  45899999999999999999999999987654322211111000       000011112233466778


Q ss_pred             HHhcCCCEEEECCCchH-----HHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCC-
Q 009759          200 VARFKPDIIHASSPGIM-----VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS-  273 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~-----~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S-  273 (526)
                      +++.+||+||++.+...     ........+..++|+|+++|+..+..        .........+.+++.+|.++++| 
T Consensus        72 ~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~--------~~~~~~~~~~~~~~~~d~ii~~s~  143 (366)
T cd03822          72 IRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHE--------PRPGDRALLRLLLRRADAVIVMSS  143 (366)
T ss_pred             HhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccc--------cchhhhHHHHHHHhcCCEEEEeeH
Confidence            88899999999873211     11112223458999999999962111        11123356777889999999996 


Q ss_pred             hhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----C
Q 009759          274 VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P  349 (526)
Q Consensus       274 ~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~  349 (526)
                      +..++.+...+   ..++.+++||++...+.+....    ... ....+.++++|+|++.+.||++.+++++..+    +
T Consensus       144 ~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~----~~~-~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~  215 (366)
T cd03822         144 ELLRALLLRAY---PEKIAVIPHGVPDPPAEPPESL----KAL-GGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHP  215 (366)
T ss_pred             HHHHHHHhhcC---CCcEEEeCCCCcCcccCCchhh----Hhh-cCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCC
Confidence            33333333322   3699999999998776543211    111 1245678999999999999999999999766    5


Q ss_pred             CcEEEEEeCCccHHH---------HHHHhcCCCeEEecc-cChhhHHHHHHcCcEEEecCCCC--CCcHHHHHHHHcCCc
Q 009759          350 EARIAFIGDGPYREE---------LEKMFTGMPAVFTGM-LLGEELSQAYASGDVFVMPSESE--TLGLVVLEAMSSGIP  417 (526)
Q Consensus       350 ~~~l~ivG~g~~~~~---------l~~l~~~~~V~~~g~-v~~~~l~~~~~~aDv~v~ps~~e--~~~~~ilEAma~G~P  417 (526)
                      +++|+++|.+.....         ++++....+|.++|. ++.+++..+|+.||++++||..|  ++|++++|||++|+|
T Consensus       216 ~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~P  295 (366)
T cd03822         216 DVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKP  295 (366)
T ss_pred             CeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCC
Confidence            899999997653222         222222347999987 99999999999999999999999  999999999999999


Q ss_pred             EEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009759          418 VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       418 vI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly  492 (526)
                      ||+++.|+ .+.+   .++.+|++++.+|+++++++|.++++|++.+.++++++++.+++|+|+.+++++. ++|
T Consensus       296 vI~~~~~~-~~~i---~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~  365 (366)
T cd03822         296 VISTPVGH-AEEV---LDGGTGLLVPPGDPAALAEAIRRLLADPELAQALRARAREYARAMSWERVAERYL-RLL  365 (366)
T ss_pred             EEecCCCC-hhee---eeCCCcEEEcCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHhhCCHHHHHHHHH-HHh
Confidence            99999999 6666   6788999999999999999999999999999999999999997799999999997 665

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.5e-36  Score=300.80  Aligned_cols=349  Identities=26%  Similarity=0.360  Sum_probs=269.6

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc--cc--cCceeccccccCCCccccccchhcccHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ--EF--YGAKLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      ||++++....   .||.+..+..++++|.+.||+|.+++.......  ..  .++.+.   .+...  .. .........
T Consensus         1 ~i~~i~~~~~---~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~i~v~---~~~~~--~~-~~~~~~~~~   71 (365)
T cd03807           1 KVLHVITGLD---VGGAERMLVRLLKGLDRDRFEHVVISLTDRGELGEELEEAGVPVY---CLGKR--PG-RPDPGALLR   71 (365)
T ss_pred             CeEEEEeecc---CccHHHHHHHHHHHhhhccceEEEEecCcchhhhHHHHhcCCeEE---EEecc--cc-cccHHHHHH
Confidence            6888877533   399999999999999999999999986543211  10  122211   11111  11 122334567


Q ss_pred             HHHHHHhcCCCEEEECCCchHHHHHHHHHHh-cCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCCh
Q 009759          196 IISEVARFKPDIIHASSPGIMVFGALIIAKL-LCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV  274 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~  274 (526)
                      +.+.+++.+||+||++......+... ..+. .+.+++++.|+......     .+.......+.+.+.+.+|.++++|+
T Consensus        72 ~~~~~~~~~~div~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~s~  145 (365)
T cd03807          72 LYKLIRRLRPDVVHTWMYHADLYGGL-AARLAGVPPVIWGIRHSDLDLG-----KKSTRLVARLRRLLSSFIPLIVANSA  145 (365)
T ss_pred             HHHHHHhhCCCEEEeccccccHHHHH-HHHhcCCCcEEEEecCCccccc-----chhHhHHHHHHHHhccccCeEEeccH
Confidence            78888899999999987654433333 3333 68899999998764422     22233445667778889999999999


Q ss_pred             hHHHHHHHhcccCCCcEEEeecCCCCCCCCCCccc-HHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----C
Q 009759          275 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRS-SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P  349 (526)
Q Consensus       275 ~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~  349 (526)
                      ...+.+...+ .+.+++.+++||+|...+.+.... ...+.+++. .++.+.++++|++.+.||++.++++++.+    +
T Consensus       146 ~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~  223 (365)
T cd03807         146 AAAEYHQAIG-YPPKKIVVIPNGVDTERFSPDLDARARLREELGL-PEDTFLIGIVARLHPQKDHATLLRAAALLLKKFP  223 (365)
T ss_pred             HHHHHHHHcC-CChhheeEeCCCcCHHhcCCcccchHHHHHhcCC-CCCCeEEEEecccchhcCHHHHHHHHHHHHHhCC
Confidence            9999998864 366789999999998877654332 223334433 45678899999999999999999999776    5


Q ss_pred             CcEEEEEeCCccHHHHHHHhc-C----CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          350 EARIAFIGDGPYREELEKMFT-G----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       350 ~~~l~ivG~g~~~~~l~~l~~-~----~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      +++|+++|.++.....+.... +    .+|.+.|.+  +++..+|+.||++++|+..|++|++++|||++|+|||+++.|
T Consensus       224 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~  301 (365)
T cd03807         224 NARLLLVGDGPDRANLELLALKELGLEDKVILLGER--SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVG  301 (365)
T ss_pred             CeEEEEecCCcchhHHHHHHHHhcCCCceEEEcccc--ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCC
Confidence            799999998876666655554 2    268889976  689999999999999999999999999999999999999999


Q ss_pred             CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 009759          425 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       425 g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~  493 (526)
                      +..+++   .+  +|++++.+|+++++++|.+++++++.+.++++++++.+ ++|+|+.+++++. ++|+
T Consensus       302 ~~~e~~---~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~y~  365 (365)
T cd03807         302 DNAELV---GD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYE-ELYR  365 (365)
T ss_pred             ChHHHh---hc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHhC
Confidence            999999   55  89999999999999999999999999999999999998 5899999999997 6763

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.8e-36  Score=296.48  Aligned_cols=337  Identities=24%  Similarity=0.367  Sum_probs=257.1

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      ||++++....  ..||.++.+..++++|.+.||+|++++.....................................+.+.
T Consensus         1 kI~i~~~~~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (348)
T cd03820           1 KILFVIPSLG--NAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYELDPKIKVIDLGDKRDSKLLARFKKLRRLRKL   78 (348)
T ss_pred             CeEEEecccc--CCCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccccCCccceeecccccccchhccccchHHHHHh
Confidence            6888887533  27999999999999999999999999986654111111111111111111111222234455678888


Q ss_pred             HHhcCCCEEEECCCchHHHHHHHHHHhcC-CCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHH
Q 009759          200 VARFKPDIIHASSPGIMVFGALIIAKLLC-VPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGK  278 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~~~~~~~~~~~~~-~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~  278 (526)
                      +++.+||+|+++.+....   .......+ +|++++.|+........       .......+..++.+|.++++|+..+.
T Consensus        79 l~~~~~d~i~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~d~ii~~s~~~~~  148 (348)
T cd03820          79 LKNNKPDVVISFLTSLLT---FLASLGLKIVKLIVSEHNSPDAYKKR-------LRRLLLRRLLYRRADAVVVLTEEDRA  148 (348)
T ss_pred             hcccCCCEEEEcCchHHH---HHHHHhhccccEEEecCCCccchhhh-------hHHHHHHHHHHhcCCEEEEeCHHHHH
Confidence            888999999999876222   22233334 49999999865432211       11112478889999999999999872


Q ss_pred             HHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEE
Q 009759          279 DLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIA  354 (526)
Q Consensus       279 ~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~  354 (526)
                      ...   .....++.+++||++...+.+.            ...+++.++++|++.+.||++.++++++.+    ++++|+
T Consensus       149 ~~~---~~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~  213 (348)
T cd03820         149 LYY---KKFNKNVVVIPNPLPFPPEEPS------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLR  213 (348)
T ss_pred             Hhh---ccCCCCeEEecCCcChhhcccc------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEE
Confidence            222   2255799999999998866543            135678899999999999999999999876    589999


Q ss_pred             EEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC-CCCce
Q 009759          355 FIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG-GIPDI  429 (526)
Q Consensus       355 ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g-g~~e~  429 (526)
                      ++|.++..+.+++++.+.    +|.+.|+  .+++..+|+.||++|+||..|++|++++|||++|+|||+++.+ +..++
T Consensus       214 i~G~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~  291 (348)
T cd03820         214 IVGDGPEREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEI  291 (348)
T ss_pred             EEeCCCCHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhh
Confidence            999998888777665543    5889998  4899999999999999999999999999999999999999975 45666


Q ss_pred             ecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          430 IPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       430 v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      +   .++.+|++++..|+++++++|.++++|++.++++++++++.+++|+|+.+++++.
T Consensus       292 ~---~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (348)
T cd03820         292 I---EDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANARESAERFSIENIIKQWE  347 (348)
T ss_pred             h---ccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence            6   6667999999999999999999999999999999999988889999999998874

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.6e-36  Score=313.10  Aligned_cols=274  Identities=27%  Similarity=0.350  Sum_probs=226.4

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccccc-----c-----cccccccchHHHHHHHHhhcCcEEEeCC
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIP-----R-----YTFSWLVKPMWLVIKFLHRAADLTLVPS  273 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~ad~ii~~S  273 (526)
                      ++|+||+|+....++.+.++++..++|+|++.|+.++....     .     .......+.+..+.+..++.||.|+++|
T Consensus       173 ~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~s  252 (475)
T cd03813         173 KADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTLY  252 (475)
T ss_pred             CCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEecC
Confidence            78999999877666777778888999999999996542110     0     0011112233456678899999999999


Q ss_pred             hhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----C
Q 009759          274 VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P  349 (526)
Q Consensus       274 ~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~  349 (526)
                      +..++.....+ .+.+|+.+||||+|.+.+.+....        ....+.++|+|+||+.+.||++.+++|++.+    +
T Consensus       253 ~~~~~~~~~~g-~~~~ki~vIpNgid~~~f~~~~~~--------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p  323 (475)
T cd03813         253 EGNRERQIEDG-ADPEKIRVIPNGIDPERFAPARRA--------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIP  323 (475)
T ss_pred             HHHHHHHHHcC-CCHHHeEEeCCCcCHHHcCCcccc--------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCC
Confidence            99988876655 467899999999999888664321        0245678999999999999999999999765    7


Q ss_pred             CcEEEEEeCCc----cHHHHHHHhcC----CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          350 EARIAFIGDGP----YREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       350 ~~~l~ivG~g~----~~~~l~~l~~~----~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                      +++++|+|.++    +.+++++++++    .+|+|+|   .+++.++|+.+|++|+||..||+|++++||||||+|||+|
T Consensus       324 ~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVat  400 (475)
T cd03813         324 DAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVAT  400 (475)
T ss_pred             CeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEEC
Confidence            89999999873    34556666653    3699999   4689999999999999999999999999999999999999


Q ss_pred             CCCCCCceecccCC------CceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 009759          422 RAGGIPDIIPEDQD------GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTIRNEQYN  493 (526)
Q Consensus       422 ~~gg~~e~v~~~~~------~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~-~fs~~~~~~~~~~~ly~  493 (526)
                      +.|+..+++   .+      |.+|++++++|+++++++|.++++|++.++++++++++.++ .|+|+.+++++. ++|+
T Consensus       401 d~g~~~elv---~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~-~lY~  475 (475)
T cd03813         401 DVGSCRELI---EGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYR-RLYL  475 (475)
T ss_pred             CCCChHHHh---cCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHhC
Confidence            999999999   55      56999999999999999999999999999999999999995 799999999997 7874

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.2e-35  Score=296.04  Aligned_cols=344  Identities=26%  Similarity=0.335  Sum_probs=264.2

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc--cccCceeccccccCCCc-cccccchhcccHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ--EFYGAKLIGSRSFPCPW-YQKVPLSLALSPRI  196 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  196 (526)
                      ||++++..     .||.+.++..++++|.+.||+|++++.......  ...+.....+   +... .......+.....+
T Consensus         1 kIl~i~~~-----~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   72 (359)
T cd03808           1 KILHIVTV-----DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPI---PLDRRGINPFKDLKALLRL   72 (359)
T ss_pred             CeeEEEec-----chhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccccCCceEEec---cccccccChHhHHHHHHHH
Confidence            68888763     589999999999999999999999997765432  1122222211   1111 01111223344567


Q ss_pred             HHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhH
Q 009759          197 ISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAI  276 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~  276 (526)
                      .+.+++.+||+||++......+..+......+.++++..|+.........   ........+++..++.+|.++++|+..
T Consensus        73 ~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~ii~~s~~~  149 (359)
T cd03808          73 YRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGG---LKRRLYLLLERLALRFTDKVIFQNEDD  149 (359)
T ss_pred             HHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccch---hHHHHHHHHHHHHHhhccEEEEcCHHH
Confidence            78888899999999976444333333222556778888887543322211   123344567788899999999999999


Q ss_pred             HHHHHHhcccC-CCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCc
Q 009759          277 GKDLEAARVTA-ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEA  351 (526)
Q Consensus       277 ~~~l~~~~~~~-~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~  351 (526)
                      .+.+.+.+..+ ..++.++++|+|.+.+.+....         ...+++.++|+|++.+.||++.++++++.+    +++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~  220 (359)
T cd03808         150 RDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP---------IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNV  220 (359)
T ss_pred             HHHHHHhcCCCcCceEEecCCCCChhhcCccccc---------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCe
Confidence            99998887533 4677888999998877554221         135678999999999999999999999887    679


Q ss_pred             EEEEEeCCccHHHHHH-----HhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC
Q 009759          352 RIAFIGDGPYREELEK-----MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI  426 (526)
Q Consensus       352 ~l~ivG~g~~~~~l~~-----l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~  426 (526)
                      +|+++|.+........     .....+|.+.|+.  +++.++|+.||++++|+..|++|++++|||++|+|||+++.++.
T Consensus       221 ~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~  298 (359)
T cd03808         221 RLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFR--DDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGC  298 (359)
T ss_pred             EEEEEcCCCcchhhHHHHHHhcCCcceEEEeecc--ccHHHHHHhccEEEecCcccCcchHHHHHHHcCCCEEEecCCCc
Confidence            9999998865544432     2223379999994  78999999999999999999999999999999999999999999


Q ss_pred             CceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 009759          427 PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  488 (526)
Q Consensus       427 ~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~  488 (526)
                      .+++   .++.+|++++.+|+++++++|.+++.|++.+.++++++++.+ ++|+|+.++++++
T Consensus       299 ~~~i---~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  358 (359)
T cd03808         299 REAV---IDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL  358 (359)
T ss_pred             hhhh---hcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence            9999   888999999999999999999999999999999999999997 6999999998875

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.1e-36  Score=301.22  Aligned_cols=325  Identities=24%  Similarity=0.346  Sum_probs=251.5

Q ss_pred             ccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc--cCceeccccccCCCccc-cccchhcccHHHHHHHHhcCCCEE
Q 009759          132 YVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF--YGAKLIGSRSFPCPWYQ-KVPLSLALSPRIISEVARFKPDII  208 (526)
Q Consensus       132 ~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~pDiV  208 (526)
                      ..||.+.++.+++++|.++||+|.+++.........  .+.....     .+... ...........+.+.+++.+||+|
T Consensus         8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~dii   82 (355)
T cd03819           8 ESGGVERGTLELARALVERGHRSLVASAGGRLVAELEAEGSRHIK-----LPFISKNPLRILLNVARLRRLIREEKVDIV   82 (355)
T ss_pred             ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHHHHhcCCeEEE-----ccccccchhhhHHHHHHHHHHHHHcCCCEE
Confidence            349999999999999999999999998754322211  1111111     11111 111223345677888889999999


Q ss_pred             EECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCC
Q 009759          209 HASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAA  288 (526)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~  288 (526)
                      |+|+.... +.+.+..+..++|+++++|+.+....              ....+++.+|.++++|+...+.+.+.++.+.
T Consensus        83 ~~~~~~~~-~~~~~~~~~~~~~~i~~~h~~~~~~~--------------~~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~  147 (355)
T cd03819          83 HARSRAPA-WSAYLAARRTRPPFVTTVHGFYSVNF--------------RYNAIMARGDRVIAVSNFIADHIRENYGVDP  147 (355)
T ss_pred             EECCCchh-HHHHHHHHhcCCCEEEEeCCchhhHH--------------HHHHHHHhcCEEEEeCHHHHHHHHHhcCCCh
Confidence            99986433 33445567779999999998654211              3445677899999999999999987776677


Q ss_pred             CcEEEeecCCCCCCCCCCcccHH----HHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEEEEeCCc
Q 009759          289 NKIRIWKKGVDSESFHPRFRSSE----MRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGP  360 (526)
Q Consensus       289 ~ki~vi~ngid~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~ivG~g~  360 (526)
                      .++.+++||+|.+.+.+......    .+.+... .++.++++++|++.+.||++.+++++..+    ++++++++|.++
T Consensus       148 ~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~  226 (355)
T cd03819         148 DRIRVIPRGVDLDRFDPGAVPPERILALAREWPL-PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQ  226 (355)
T ss_pred             hhEEEecCCccccccCccccchHHHHHHHHHcCC-CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCc
Confidence            89999999999988765432111    2333332 45678899999999999999999999887    469999999876


Q ss_pred             cHHHH----HHHhc----CCCeEEecccChhhHHHHHHcCcEEEecC-CCCCCcHHHHHHHHcCCcEEEeCCCCCCceec
Q 009759          361 YREEL----EKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPS-ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIP  431 (526)
Q Consensus       361 ~~~~l----~~l~~----~~~V~~~g~v~~~~l~~~~~~aDv~v~ps-~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~  431 (526)
                      ..+.+    .+.+.    ..+|++.|+.  +++.++|++||++++|| ..|++|++++|||++|+|||+++.|+..|++ 
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i-  303 (355)
T cd03819         227 GRRFYYAELLELIKRLGLQDRVTFVGHC--SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETV-  303 (355)
T ss_pred             ccchHHHHHHHHHHHcCCcceEEEcCCc--ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHHH-
Confidence            43332    22332    2369999994  79999999999999999 7899999999999999999999999999999 


Q ss_pred             ccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHHHHHHHHHHH-HhCCHHH
Q 009759          432 EDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEM-EKYDWRA  482 (526)
Q Consensus       432 ~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~~~a~~~~-~~fs~~~  482 (526)
                        .++.+|++++++|+++++++|..++. +++.++++++++++.+ ++|+|+.
T Consensus       304 --~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~  354 (355)
T cd03819         304 --RPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR  354 (355)
T ss_pred             --hCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence              88889999999999999999975554 8999999999999999 5899985

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>PLN00142 sucrose synthase

Probab=100.00  E-value=7.1e-36  Score=311.66  Aligned_cols=378  Identities=19%  Similarity=0.257  Sum_probs=257.0

Q ss_pred             CCCcEEEEEeccCC--------CCccCchHHHHHHH--------HHHHHHCCCeEE----EEEeCCCCC---------cc
Q 009759          116 SRPRRIALFVEPSP--------FSYVSGYKNRFQNF--------IKYLREMGDEVM----VVTTHEGVP---------QE  166 (526)
Q Consensus       116 ~~~mkIliv~~~~p--------~~~~gG~~~~~~~l--------~~~L~~~G~~V~----vi~~~~~~~---------~~  166 (526)
                      ..-|||++++.+..        .++.||-..++.++        ++.|+++||+|+    |+|......         +.
T Consensus       277 p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~  356 (815)
T PLN00142        277 PMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEK  356 (815)
T ss_pred             hHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccCCcccCccee
Confidence            44579999966542        26677777777654        477888999875    877532211         11


Q ss_pred             cc---CceeccccccCCC-----cccc---ccchhcccHHHHHHH-Hh--cCCCEEEECCCchHHHHHHHHHHhcCCCEE
Q 009759          167 FY---GAKLIGSRSFPCP-----WYQK---VPLSLALSPRIISEV-AR--FKPDIIHASSPGIMVFGALIIAKLLCVPIV  232 (526)
Q Consensus       167 ~~---~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~l~~~l-~~--~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v  232 (526)
                      ..   +..+++++.-+..     +..+   .++...+...+.+.+ ++  .+||+||+|.+. .++.+..+++..++|.|
T Consensus       357 v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwd-sg~vA~~La~~lgVP~v  435 (815)
T PLN00142        357 VSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSD-GNLVASLLAHKLGVTQC  435 (815)
T ss_pred             ccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcc-HHHHHHHHHHHhCCCEE
Confidence            11   1222222222210     0011   011122223344333 22  359999999864 45667888999999999


Q ss_pred             EEEecCCccccccccccc--cc-c----hHHHHHHHHhhcCcEEEeCChhHHHH-------HHHhc------------cc
Q 009759          233 MSYHTHVPVYIPRYTFSW--LV-K----PMWLVIKFLHRAADLTLVPSVAIGKD-------LEAAR------------VT  286 (526)
Q Consensus       233 ~~~h~~~~~~~~~~~~~~--~~-~----~~~~~~~~~~~~ad~ii~~S~~~~~~-------l~~~~------------~~  286 (526)
                      .+.|.............+  .. +    .....+..++..||.||+.|......       +..+.            ++
T Consensus       436 ~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GI  515 (815)
T PLN00142        436 TIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI  515 (815)
T ss_pred             EEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccc
Confidence            999975322111111100  00 1    01234777889999999999877642       22221            11


Q ss_pred             --CCCcEEEeecCCCCCCCCCCcccHH------------------HHHhhcC-CCCCCcEEEEEecccccccHHHHHHHH
Q 009759          287 --AANKIRIWKKGVDSESFHPRFRSSE------------------MRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRVM  345 (526)
Q Consensus       287 --~~~ki~vi~ngid~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~i~~vG~l~~~Kg~~~li~a~  345 (526)
                        ...++.+|++|+|...|.|......                  .+..++. ...++++|+++||+.+.||++.+++|+
T Consensus       516 d~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~  595 (815)
T PLN00142        516 DVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWY  595 (815)
T ss_pred             cccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHH
Confidence              2458999999999998876432211                  1122332 245677999999999999999999999


Q ss_pred             HhC----CCcEEEEEeCCc------cH------HHHHHHhcCC----CeEEecccC----hhhHHHHHH-cCcEEEecCC
Q 009759          346 DRL----PEARIAFIGDGP------YR------EELEKMFTGM----PAVFTGMLL----GEELSQAYA-SGDVFVMPSE  400 (526)
Q Consensus       346 ~~l----~~~~l~ivG~g~------~~------~~l~~l~~~~----~V~~~g~v~----~~~l~~~~~-~aDv~v~ps~  400 (526)
                      +++    ++++|+|+|+|.      ..      +.+.+++++.    +|.|+|...    .+++..+++ ++|++|+||.
T Consensus       596 a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~  675 (815)
T PLN00142        596 GKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL  675 (815)
T ss_pred             HHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc
Confidence            866    368999999762      11      2344455543    588888543    356777776 4799999999


Q ss_pred             CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHh----hhCHHHHHHHHHHHHHHH-
Q 009759          401 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL----LYNQELRETMGQAARQEM-  475 (526)
Q Consensus       401 ~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~l----l~d~~~~~~~~~~a~~~~-  475 (526)
                      +|+||++++||||||+|||+|+.||..|++   .++.+|+++++.|+++++++|.++    +.|++.+++|+++|++.+ 
T Consensus       676 ~EgFGLvvLEAMA~GlPVVATdvGG~~EIV---~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~  752 (815)
T PLN00142        676 YEAFGLTVVEAMTCGLPTFATCQGGPAEII---VDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIY  752 (815)
T ss_pred             ccCCCHHHHHHHHcCCCEEEcCCCCHHHHh---cCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999   999999999999999999998765    469999999999999998 


Q ss_pred             HhCCHHHHHHHHHHHHHHHHHHHH
Q 009759          476 EKYDWRAATRTIRNEQYNAAIWFW  499 (526)
Q Consensus       476 ~~fs~~~~~~~~~~~ly~~~l~~~  499 (526)
                      ++|||+.+++++++ + ..+-..|
T Consensus       753 e~FSWe~~A~rll~-L-~~~~~~~  774 (815)
T PLN00142        753 ECYTWKIYAERLLT-L-GGVYGFW  774 (815)
T ss_pred             HhCCHHHHHHHHHH-H-Hhhcchh
Confidence            68999999999983 3 2444444

>PLN02949 transferase, transferring glycosyl groups

Probab=100.00  E-value=5.1e-35  Score=296.79  Aligned_cols=365  Identities=16%  Similarity=0.239  Sum_probs=251.6

Q ss_pred             CCCCCcEEEEEeccCCCC-ccCchHHHHHHHHHHHHHCCC--eEEEEEeCCCCC-cc-------ccCceec---------
Q 009759          114 NNSRPRRIALFVEPSPFS-YVSGYKNRFQNFIKYLREMGD--EVMVVTTHEGVP-QE-------FYGAKLI---------  173 (526)
Q Consensus       114 ~~~~~mkIliv~~~~p~~-~~gG~~~~~~~l~~~L~~~G~--~V~vi~~~~~~~-~~-------~~~~~~~---------  173 (526)
                      +..++++|+++..   .. ..||+++.++..+.+|++.|+  +|.+++.+.+.. ++       ..++++.         
T Consensus        29 ~~~~~~~v~f~HP---~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~v~l~  105 (463)
T PLN02949         29 RRSRKRAVGFFHP---YTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLR  105 (463)
T ss_pred             ccCCCcEEEEECC---CCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceEEEec
Confidence            3556678888854   34 455999999999999999999  666666442211 11       1111110         


Q ss_pred             cccccCCCccccccc---hhcccHHHHHHHHhcCCCEEEECCCc-hHHHHHHHHHHhcCCCEEEEEecCCccc--c----
Q 009759          174 GSRSFPCPWYQKVPL---SLALSPRIISEVARFKPDIIHASSPG-IMVFGALIIAKLLCVPIVMSYHTHVPVY--I----  243 (526)
Q Consensus       174 ~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~~pDiV~~~~~~-~~~~~~~~~~~~~~~p~v~~~h~~~~~~--~----  243 (526)
                      ....++...+.+...   .+......++.+.+..|| |++.... .+.+   .+.+..+.|+++++|...-..  .    
T Consensus       106 ~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~-v~vDt~~~~~~~---pl~~~~~~~v~~yvH~p~~~~dm~~~v~  181 (463)
T PLN02949        106 KRKWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPL-YFFDTSGYAFTY---PLARLFGCKVVCYTHYPTISSDMISRVR  181 (463)
T ss_pred             cccccccccCCceehHHHHHHHHHHHHHHHHhcCCC-EEEeCCCcccHH---HHHHhcCCcEEEEEeCCcchHHHHHHHh
Confidence            001111111111111   111222233334444555 5555432 2222   223456899999999643111  0    


Q ss_pred             -------------cccccccccchHH----HHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCC
Q 009759          244 -------------PRYTFSWLVKPMW----LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPR  306 (526)
Q Consensus       244 -------------~~~~~~~~~~~~~----~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~  306 (526)
                                   ...........++    .++....+.+|.++++|+..++.+.+.+.. ..++.+++||+|.+.+...
T Consensus       182 ~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~-~~~i~vvyp~vd~~~~~~~  260 (463)
T PLN02949        182 DRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRI-PERIKRVYPPCDTSGLQAL  260 (463)
T ss_pred             hcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCC-CCCeEEEcCCCCHHHcccC
Confidence                         0000011111111    244555688999999999999999887653 3578999999987655321


Q ss_pred             cccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC--------CCcEEEEEeCCcc------HHHHHHHhcCC
Q 009759          307 FRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--------PEARIAFIGDGPY------REELEKMFTGM  372 (526)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l--------~~~~l~ivG~g~~------~~~l~~l~~~~  372 (526)
                      ...         ...++..++++||+.++||++.+++|+.++        ++++|+|+|++..      .+++++++++.
T Consensus       261 ~~~---------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l  331 (463)
T PLN02949        261 PLE---------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKEL  331 (463)
T ss_pred             Ccc---------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHc
Confidence            110         123457899999999999999999998753        5799999998632      24567766643


Q ss_pred             ----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC-ceecccCCCceeEeeCCCCH
Q 009759          373 ----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP-DIIPEDQDGKIGYLFNPGDL  447 (526)
Q Consensus       373 ----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~-e~v~~~~~~~~g~~~~~~d~  447 (526)
                          +|.|+|+++.+++.++|+.||++|+|+..|+||++++||||+|+|||+++.||.. |++.+..++.+|++++  |+
T Consensus       332 ~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~  409 (463)
T PLN02949        332 GLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TV  409 (463)
T ss_pred             CCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CH
Confidence                6999999999999999999999999999999999999999999999999999864 7773222367899885  99


Q ss_pred             HHHHHHHHHhhh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Q 009759          448 DDCLSKLEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWF  498 (526)
Q Consensus       448 ~~la~ai~~ll~-d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~~  498 (526)
                      ++++++|.++++ +++.+++|++++++.+++|||+.+++++. +.|+++++.
T Consensus       410 ~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~-~~i~~l~~~  460 (463)
T PLN02949        410 EEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFK-DAIRPILNS  460 (463)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHH-HHHHHHHhh
Confidence            999999999998 67889999999999998899999999997 788887764

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=2.3e-35  Score=294.59  Aligned_cols=291  Identities=18%  Similarity=0.210  Sum_probs=223.4

Q ss_pred             ccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEE-EecCCcccccccccccccchHHHHHH--HHhhcCcE
Q 009759          192 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMS-YHTHVPVYIPRYTFSWLVKPMWLVIK--FLHRAADL  268 (526)
Q Consensus       192 ~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~-~h~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ad~  268 (526)
                      ....+..++++.+||+||+|......+ +.+.++..++|++++ .|...+..    ........+....+  .+...+| 
T Consensus       268 ~~~~l~~~ir~~rpDIVHt~~~~a~l~-g~laA~lagvpviv~~~h~~~~~~----~~r~~~~e~~~~~~a~~i~~~sd-  341 (578)
T PRK15490        268 GIKHLVPHLCERKLDYLSVWQDGACLM-IALAALIAGVPRIQLGLRGLPPVV----RKRLFKPEYEPLYQALAVVPGVD-  341 (578)
T ss_pred             HHHHHHHHHHHcCCCEEEEcCcccHHH-HHHHHHhcCCCEEEEeecccCCcc----hhhHHHHHHHHhhhhceeEecch-
Confidence            345788899999999999998654333 555677789999765 55522211    10101010011111  1234455 


Q ss_pred             EEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccH-HHHHhhcCC-CCCCcEEEEEecccccccHHHHHHHHH
Q 009759          269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS-EMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKRVMD  346 (526)
Q Consensus       269 ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~-~~~~~~~~~-~~~~~~i~~vG~l~~~Kg~~~li~a~~  346 (526)
                      +++.|...++.+.+.++.+.+++.+|+||+|.+.|.+..... ..+..+... .++.++|+++|++...||...+++++.
T Consensus       342 ~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a  421 (578)
T PRK15490        342 FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAA  421 (578)
T ss_pred             hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHH
Confidence            678888888988888777889999999999998887653221 222222111 345678999999999999999998886


Q ss_pred             hC----CCcEEEEEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcE
Q 009759          347 RL----PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  418 (526)
Q Consensus       347 ~l----~~~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~Pv  418 (526)
                      .+    ++++|+|+|+|+..+++++++++.    +|+|+|+.  +|+..+|+.+|++|+||.+||+|++++|||++|+||
T Consensus       422 ~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~--~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPV  499 (578)
T PRK15490        422 RYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGAS--RDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPV  499 (578)
T ss_pred             HHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCCh--hhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCE
Confidence            54    789999999999888888877643    69999996  689999999999999999999999999999999999


Q ss_pred             EEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHH---HHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Q 009759          419 VGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL---EPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       419 I~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai---~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~  494 (526)
                      |+++.||..|++   .++.+|++++++|++++++++   ..+..+.+.+..+++++++++ ++|||+.++++|. ++|.+
T Consensus       500 VATdvGG~~EiV---~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~-ki~~~  575 (578)
T PRK15490        500 ISTPAGGSAECF---IEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFV-KTIAS  575 (578)
T ss_pred             EEeCCCCcHHHc---ccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH-HHHHh
Confidence            999999999999   899999999999998888876   344445555667899999999 5899999999997 78764

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]

Probab=100.00  E-value=7.8e-37  Score=279.93  Aligned_cols=380  Identities=23%  Similarity=0.335  Sum_probs=278.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc----cCceeccccccCCCccccccchhcccH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF----YGAKLIGSRSFPCPWYQKVPLSLALSP  194 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (526)
                      ++|+++++. .+|..||.+.+++.+.+.|.+.||.|.+++..++.....    .+.+++..+.....-...++.-+..+.
T Consensus         1 ~~i~mVsdf-f~P~~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~ptv~~~~P   79 (426)
T KOG1111|consen    1 SRILMVSDF-FYPSTGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDFP   79 (426)
T ss_pred             CcceeeCcc-cccCCCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeeeecccchhhhhccCc
Confidence            478888885 569999999999999999999999999999877654211    112222222111111111222344455


Q ss_pred             HHHHHHHhcCCCEEEECCCch-HHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCC
Q 009759          195 RIISEVARFKPDIIHASSPGI-MVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS  273 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~~~~-~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S  273 (526)
                      -++..+.+++..|||.|++.. +...+++.++..|.++|++-|..+....-..      ....++....+...|.+||+|
T Consensus        80 llr~i~lrE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHSlfGfad~~s------i~~n~ll~~sL~~id~~IcVs  153 (426)
T KOG1111|consen   80 LLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLFGFADIGS------ILTNKLLPLSLANIDRIICVS  153 (426)
T ss_pred             ccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCceEEEeccccccccchhh------hhhcceeeeeecCCCcEEEEe
Confidence            677777777999999998643 3455777888999999999998654221111      111133455678899999999


Q ss_pred             hhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----C
Q 009759          274 VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P  349 (526)
Q Consensus       274 ~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~  349 (526)
                      ..-++...-.+..+.+++.+|||.++...|.|.....        ...+...++.++|+..+||+|++++++.++    |
T Consensus       154 htskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~--------~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p  225 (426)
T KOG1111|consen  154 HTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADK--------PSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHP  225 (426)
T ss_pred             ecCCCceEEEeccCHhHeeeccceeeccccccCcccc--------CCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCC
Confidence            9888876656666789999999999999999854331        233447899999999999999999988665    8


Q ss_pred             CcEEEEEeCCccHHHHHHHhc----CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC
Q 009759          350 EARIAFIGDGPYREELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG  425 (526)
Q Consensus       350 ~~~l~ivG~g~~~~~l~~l~~----~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg  425 (526)
                      +++|+|+|+||.+..++++.+    +.+|.++|.++++++.+.|.+-|++++||..|.|+++++||++||+|||++.+||
T Consensus       226 ~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVGG  305 (426)
T KOG1111|consen  226 EVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGG  305 (426)
T ss_pred             CeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecCC
Confidence            999999999995544444444    4579999999999999999999999999999999999999999999999999999


Q ss_pred             CCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHH-----
Q 009759          426 IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWFW-----  499 (526)
Q Consensus       426 ~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~~l~~~-----  499 (526)
                      ++|+++   ++  -.+....+++++++++++++..-.   ..-....+.+ +.|+|++++++-+ .+|.++....     
T Consensus       306 IpeVLP---~d--~i~~~~~~~~dl~~~v~~ai~~~~---~~p~~~h~~v~~~y~w~dVa~rTe-kvy~r~~~t~~~~~~  376 (426)
T KOG1111|consen  306 IPEVLP---ED--MITLGEPGPDDLVGAVEKAITKLR---TLPLEFHDRVKKMYSWKDVAERTE-KVYDRAATTSIRNEQ  376 (426)
T ss_pred             ccccCC---cc--ceeccCCChHHHHHHHHHHHHHhc---cCchhHHHHHHHhccHHHHHHHHH-HHHHHHhhccCcCHH
Confidence            999993   22  223444478888888888875321   1123345556 4699999999996 8998887643     


Q ss_pred             --------HH---hhhcccCchhhhhhhcCCCCc
Q 009759          500 --------RK---KRAQLLRPIQWLAKRIFPSAE  522 (526)
Q Consensus       500 --------~~---~~~~~~~~~~~~~~~~~~~~~  522 (526)
                              ++   +..-..-++.|+...+++-|+
T Consensus       377 ~r~~~~~~~g~~g~~~~v~~~i~~ll~~Ll~l~~  410 (426)
T KOG1111|consen  377 DRLKIWLYRGVGGKLFHVLGPINYLLKRLLELPE  410 (426)
T ss_pred             HHHHHHhhccCCceEEEEehHHHHHHHHHhcccC
Confidence                    11   223344567777777777665

>PLN02501 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=3.3e-35  Score=295.91  Aligned_cols=350  Identities=17%  Similarity=0.146  Sum_probs=255.0

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCCCcc--ccCce-----------e--------
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGVPQE--FYGAK-----------L--------  172 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~--~~~~~-----------~--------  172 (526)
                      +..+.+|+||+.... |...|...--+--|.+|++. |++|+++.+.-.....  .++..           .        
T Consensus       319 ~~~~r~~~ivTtAsl-PWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r  397 (794)
T PLN02501        319 SDGKRHVAIVTTASL-PWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEER  397 (794)
T ss_pred             ccCCCeEEEEEcccC-cccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHh
Confidence            445578999987654 77788777777778889888 7999999875321100  00000           0        


Q ss_pred             ccc-cccCCCc----cccccchhcccHHHHHHHHhcCCCEEEECCCchHHHH--HHHHHHhcCCCEEEEEecCCcccccc
Q 009759          173 IGS-RSFPCPW----YQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFG--ALIIAKLLCVPIVMSYHTHVPVYIPR  245 (526)
Q Consensus       173 ~~~-~~~~~~~----~~~~~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~--~~~~~~~~~~p~v~~~h~~~~~~~~~  245 (526)
                      .+. ..+.+.+    +.....++.-...+.+.+..++|||||++.|...++.  +..++++.+ |+|..+|+.++.|...
T Consensus       398 ~g~~~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~  476 (794)
T PLN02501        398 IGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKR  476 (794)
T ss_pred             cCCCCCceEEeecchhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhH
Confidence            000 0111111    1112223444568899999999999999999888877  788888888 8999999999888877


Q ss_pred             cccccccchHHHHHHHHhhc--CcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCC
Q 009759          246 YTFSWLVKPMWLVIKFLHRA--ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDK  323 (526)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~--ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~  323 (526)
                      +...+.......+....+..  ||.++++|..+.+ +      +...+ ...||||.+.|.|...... +.+++. ....
T Consensus       477 y~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq~-L------~~~vI-~nVnGVDte~F~P~~r~~~-~r~lgi-~~~~  546 (794)
T PLN02501        477 EKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQD-L------PKSVI-CNVHGVNPKFLKIGEKVAE-ERELGQ-QAFS  546 (794)
T ss_pred             hcchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHHH-h------cccce-eecccccccccCCcchhHH-HHhcCC-cccc
Confidence            76555554333222233332  8999999977763 3      11222 2237999999988644222 233332 2233


Q ss_pred             cEEEEEecccccccHHHHHHHHHhC----CCcEEEEEeCCccHHHHHHHhcCC--CeEEecccChhhHHHHHHcCcEEEe
Q 009759          324 PLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVM  397 (526)
Q Consensus       324 ~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~ivG~g~~~~~l~~l~~~~--~V~~~g~v~~~~l~~~~~~aDv~v~  397 (526)
                      ..++|+||+.+.||++.|+++++.+    ++++|+|+|+|+..+++++++.+.  +|.|+|..  ++...+|+.+|++|+
T Consensus       547 kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~--dd~~~lyasaDVFVl  624 (794)
T PLN02501        547 KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGR--DHADDSLHGYKVFIN  624 (794)
T ss_pred             CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCC--CCHHHHHHhCCEEEE
Confidence            4589999999999999999999765    589999999999999999888765  48888887  566789999999999


Q ss_pred             cCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHh
Q 009759          398 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK  477 (526)
Q Consensus       398 ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~  477 (526)
                      ||..|++|++++||||||+|||+++.+|... +   .++.+|+++  +|.++++++|.+++.++..+..+.     ....
T Consensus       625 PS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-V---~~g~nGll~--~D~EafAeAI~~LLsd~~~rl~~~-----a~~~  693 (794)
T PLN02501        625 PSISDVLCTATAEALAMGKFVVCADHPSNEF-F---RSFPNCLTY--KTSEDFVAKVKEALANEPQPLTPE-----QRYN  693 (794)
T ss_pred             CCCcccchHHHHHHHHcCCCEEEecCCCCce-E---eecCCeEec--CCHHHHHHHHHHHHhCchhhhHHH-----HHhh
Confidence            9999999999999999999999999998544 6   567788876  599999999999999876443322     1348


Q ss_pred             CCHHHHHHHHHH
Q 009759          478 YDWRAATRTIRN  489 (526)
Q Consensus       478 fs~~~~~~~~~~  489 (526)
                      +||+++++++++
T Consensus       694 ~SWeAaadrLle  705 (794)
T PLN02501        694 LSWEAATQRFME  705 (794)
T ss_pred             CCHHHHHHHHHH
Confidence            999999999984

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.1e-35  Score=290.59  Aligned_cols=340  Identities=27%  Similarity=0.328  Sum_probs=259.6

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      ||++++...+   .||++..+..++++|.+.||+|.+++................ ....................+.+.
T Consensus         1 kIl~~~~~~~---~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   76 (353)
T cd03811           1 KILFVIPSLG---GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVK-LIPVRVLKLKSLRDLLAILRLRRL   76 (353)
T ss_pred             CeEEEeeccc---CCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchh-hhceeeeecccccchhHHHHHHHH
Confidence            6888887533   699999999999999999999999997654332211111000 000000111122223445678888


Q ss_pred             HHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHH
Q 009759          200 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD  279 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~  279 (526)
                      +++.+||+|+++......+...+..+. ++|+++++|+............      ....+..++.+|.++++|+..++.
T Consensus        77 ~~~~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~ii~~s~~~~~~  149 (353)
T cd03811          77 LRKEKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKLRL------LLLIRKLYRRADKIVAVSEGVKED  149 (353)
T ss_pred             HHhcCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccchhH------HHHHHhhccccceEEEeccchhhh
Confidence            888999999999871222222333333 8999999999775433222111      145788889999999999999999


Q ss_pred             HHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCC----CcEEEE
Q 009759          280 LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP----EARIAF  355 (526)
Q Consensus       280 l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~----~~~l~i  355 (526)
                      +.+.++.+..++.+++||+|.+.+.+......   ... ...++.+++++|++...||++.++++++.+.    +++|++
T Consensus       150 ~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~-~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i  225 (353)
T cd03811         150 LLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL---ELG-IPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVI  225 (353)
T ss_pred             HHHhhcCCccccEEecCCcChhhcCcccchhh---hcC-CCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEE
Confidence            99988755689999999999987765432211   111 2457788999999999999999999999884    799999


Q ss_pred             EeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceec
Q 009759          356 IGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIP  431 (526)
Q Consensus       356 vG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~  431 (526)
                      +|.++..+.+++.+...    +|.+.|++  +++.++|+.||++|+||..|++|++++|||++|+|||+++.|+..|++ 
T Consensus       226 ~G~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i-  302 (353)
T cd03811         226 LGDGPLREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREIL-  302 (353)
T ss_pred             EcCCccHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHh-
Confidence            99988777777666543    69999997  578999999999999999999999999999999999999999999999 


Q ss_pred             ccCCCceeEeeCCCCHHHH---HHHHHHhhhCHHHHHHHHHHHHHHH-HhCC
Q 009759          432 EDQDGKIGYLFNPGDLDDC---LSKLEPLLYNQELRETMGQAARQEM-EKYD  479 (526)
Q Consensus       432 ~~~~~~~g~~~~~~d~~~l---a~ai~~ll~d~~~~~~~~~~a~~~~-~~fs  479 (526)
                        .++.+|++++++|.+++   ++++..+..+++.++++++++++.+ ++|+
T Consensus       303 --~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (353)
T cd03811         303 --EDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYS  352 (353)
T ss_pred             --cCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence              89999999999999999   7888888889999999999777776 5665

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.5e-34  Score=293.03  Aligned_cols=343  Identities=18%  Similarity=0.222  Sum_probs=240.3

Q ss_pred             EEEEeccCCCCccC-chHHHHHHHHHHHHHC--CCeEEEEEeCCCCCc---------cc-----cCceeccc----cccC
Q 009759          121 IALFVEPSPFSYVS-GYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQ---------EF-----YGAKLIGS----RSFP  179 (526)
Q Consensus       121 Iliv~~~~p~~~~g-G~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~---------~~-----~~~~~~~~----~~~~  179 (526)
                      |+|+.   |....| |+++.++..+.+|++.  ||+|++++.......         .+     .+..+..+    ..++
T Consensus         3 ~~f~h---p~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~   79 (419)
T cd03806           3 VGFFH---PYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVE   79 (419)
T ss_pred             EEEEC---CCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeec
Confidence            45553   344445 9999999999999999  899999998765422         11     11111111    1111


Q ss_pred             CCccccccchhcccHHHH---HHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcc----ccccc------
Q 009759          180 CPWYQKVPLSLALSPRII---SEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV----YIPRY------  246 (526)
Q Consensus       180 ~~~~~~~~~~~~~~~~l~---~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----~~~~~------  246 (526)
                      ...+.+......+...+.   +.+.+.+||+++.+......+.  +.....++|+|+++|  +|.    .....      
T Consensus        80 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~--~~~~~~~~~~i~y~h--~P~~~~d~l~~~~~~~~~  155 (419)
T cd03806          80 ASTYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYP--LVRLLGGCPVGAYVH--YPTISTDMLQKVRSREAS  155 (419)
T ss_pred             cccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHH--HHHHhcCCeEEEEec--CCcchHHHHHHHhhcccc
Confidence            112222222222222222   2333458999988874333332  222334889999999  441    11000      


Q ss_pred             -------cccc---cc-----chHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHH
Q 009759          247 -------TFSW---LV-----KPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE  311 (526)
Q Consensus       247 -------~~~~---~~-----~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~  311 (526)
                             ....   ..     +....+++..++.+|.++++|+..++.+.+.+.. .+++.+|+||+|.+.+.+....  
T Consensus       156 ~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~-~~~~~vi~~gvd~~~~~~~~~~--  232 (419)
T cd03806         156 YNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKR-NTKPSIVYPPCDVEELLKLPLD--  232 (419)
T ss_pred             ccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCc-CCCcEEEcCCCCHHHhcccccc--
Confidence                   0000   11     1112467788899999999999999999887653 3589999999998776543210  


Q ss_pred             HHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----C-----CcEEEEEeCCc------cHHHHHHHhcC----C
Q 009759          312 MRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P-----EARIAFIGDGP------YREELEKMFTG----M  372 (526)
Q Consensus       312 ~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~-----~~~l~ivG~g~------~~~~l~~l~~~----~  372 (526)
                             ...+..+|+|+|++.+.||++.+++|+..+    +     +++|+|+|++.      +.+++++++++    .
T Consensus       233 -------~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~  305 (419)
T cd03806         233 -------EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLED  305 (419)
T ss_pred             -------cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCC
Confidence                   134567899999999999999999999876    2     48999999763      34566666653    2


Q ss_pred             CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC-CceecccC---CCceeEeeCCCCHH
Q 009759          373 PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI-PDIIPEDQ---DGKIGYLFNPGDLD  448 (526)
Q Consensus       373 ~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~-~e~v~~~~---~~~~g~~~~~~d~~  448 (526)
                      +|+|+|.++++++..+|+.||++|+|+..|+||++++||||||+|||+++.||. .+++   +   ++.+|++++  |++
T Consensus       306 ~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv---~~~~~g~~G~l~~--d~~  380 (419)
T cd03806         306 KVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIV---VPWDGGPTGFLAS--TAE  380 (419)
T ss_pred             eEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchhee---eccCCCCceEEeC--CHH
Confidence            699999999999999999999999999999999999999999999999998764 5788   6   789999985  999


Q ss_pred             HHHHHHHHhhhCHH-HHHHHHHHHHHHHHhCCHHHHHH
Q 009759          449 DCLSKLEPLLYNQE-LRETMGQAARQEMEKYDWRAATR  485 (526)
Q Consensus       449 ~la~ai~~ll~d~~-~~~~~~~~a~~~~~~fs~~~~~~  485 (526)
                      +++++|.+++++++ .++.+++++++..++|||+.+.+
T Consensus       381 ~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f~~  418 (419)
T cd03806         381 EYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEFER  418 (419)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHhcc
Confidence            99999999999654 55555555555447999998753

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.3e-34  Score=287.23  Aligned_cols=334  Identities=21%  Similarity=0.307  Sum_probs=240.1

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcccc---CceeccccccCCCccccccchhcccHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFY---GAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      ||+++.+.+  ...||+++.+.++++.|.+  .+|..............   ..........+... ........+...+
T Consensus         1 ~i~~~~~~~--~~~GG~E~~~~~l~~~l~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   75 (351)
T cd03804           1 KVAIVHDWL--VNIGGGEKVVEALARLFPD--ADIFTLVDDPDKLPRLLRLKKIRTSFIQKLPFAR-RRYRKYLPLMPLA   75 (351)
T ss_pred             CEEEEEecc--ccCCCHHHHHHHHHHhCCC--CCEEEEeecCCccchhhcCCceeechhhhchhhH-hhHhhhCchhhHH
Confidence            688887653  4569999999999999865  23333322222111111   01111111111110 1111122233344


Q ss_pred             HHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCc-------cccccccc------ccccchHHHHHHHHh
Q 009759          197 ISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVP-------VYIPRYTF------SWLVKPMWLVIKFLH  263 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-------~~~~~~~~------~~~~~~~~~~~~~~~  263 (526)
                      .+.+...++|+|+++......    .+....++|.++++|....       .+......      .+....+...++..+
T Consensus        76 ~~~~~~~~~D~v~~~~~~~~~----~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (351)
T cd03804          76 IEQFDLSGYDLVISSSHAVAK----GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSA  151 (351)
T ss_pred             HHhccccCCCEEEEcCcHHhc----cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHh
Confidence            555666799999988753221    1124567889999886321       11111100      112223445667778


Q ss_pred             hcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHH
Q 009759          264 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR  343 (526)
Q Consensus       264 ~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~  343 (526)
                      +.+|.++++|+.+++.+.+.+.   .+..+++||+|.+.+.+.             ......++|+|++.+.||++.+++
T Consensus       152 ~~~d~ii~~S~~~~~~~~~~~~---~~~~vi~~~~d~~~~~~~-------------~~~~~~il~~G~~~~~K~~~~li~  215 (351)
T cd03804         152 ARVDYFIANSRFVARRIKKYYG---RDATVIYPPVDTDRFTPA-------------EEKEDYYLSVGRLVPYKRIDLAIE  215 (351)
T ss_pred             cCCCEEEECCHHHHHHHHHHhC---CCcEEECCCCCHhhcCcC-------------CCCCCEEEEEEcCccccChHHHHH
Confidence            9999999999999999987764   356899999998877654             123456899999999999999999


Q ss_pred             HHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCC
Q 009759          344 VMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  423 (526)
Q Consensus       344 a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~  423 (526)
                      +++.++ ++|+|+|+|+..+.+++ ....+|+++|+++++++.++|+.||++|+|+. |++|++++|||+||+|||+++.
T Consensus       216 a~~~~~-~~l~ivG~g~~~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~  292 (351)
T cd03804         216 AFNKLG-KRLVVIGDGPELDRLRA-KAGPNVTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGK  292 (351)
T ss_pred             HHHHCC-CcEEEEECChhHHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCC
Confidence            999997 99999999988777777 33458999999999999999999999999999 9999999999999999999999


Q ss_pred             CCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 009759          424 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  487 (526)
Q Consensus       424 gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~  487 (526)
                      ||..|++   .++.+|++++++|+++++++|.++++|++   .++++.++.+++|+|++..+++
T Consensus       293 ~~~~e~i---~~~~~G~~~~~~~~~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~  350 (351)
T cd03804         293 GGALETV---IDGVTGILFEEQTVESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI  350 (351)
T ss_pred             CCCccee---eCCCCEEEeCCCCHHHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence            9999999   88899999999999999999999999884   2334455556789999998775

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.9e-32  Score=277.38  Aligned_cols=266  Identities=24%  Similarity=0.307  Sum_probs=218.2

Q ss_pred             cCCCEEEECCCchHHHHHHHHHHhcCCC-EEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHH
Q 009759          203 FKPDIIHASSPGIMVFGALIIAKLLCVP-IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLE  281 (526)
Q Consensus       203 ~~pDiV~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~  281 (526)
                      .++|++|.+......+....+.+..+.+ +|.+.|+.....  .    ..........+.+++.+|.++++|+..++.+.
T Consensus       126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~----~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~  199 (407)
T cd04946         126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--D----RYPSGYIPLRRYLLSSLDAVFPCSEQGRNYLQ  199 (407)
T ss_pred             cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--h----hccccchHHHHHHHhcCCEEEECCHHHHHHHH
Confidence            4567888876555555555555666655 899999743211  0    11111224456678999999999999999999


Q ss_pred             HhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----C--CcEEEE
Q 009759          282 AARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P--EARIAF  355 (526)
Q Consensus       282 ~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~--~~~l~i  355 (526)
                      +.++...+++.+++||++...+.+..           ...+.+.++++|++.+.||++.+++++..+    |  ++++++
T Consensus       200 ~~~~~~~~ki~vi~~gv~~~~~~~~~-----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~i  268 (407)
T cd04946         200 KRYPAYKEKIKVSYLGVSDPGIISKP-----------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTH  268 (407)
T ss_pred             HHCCCccccEEEEECCcccccccCCC-----------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEE
Confidence            88776778999999999887654331           234678899999999999999999999877    3  466788


Q ss_pred             EeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHc--CcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCce
Q 009759          356 IGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYAS--GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDI  429 (526)
Q Consensus       356 vG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~--aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~  429 (526)
                      +|+|+..+.++++++..    +|.++|+++++++.++|+.  +|++++||..||+|++++|||++|+|||++++||..|+
T Consensus       269 iG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~  348 (407)
T cd04946         269 IGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEI  348 (407)
T ss_pred             EeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHH
Confidence            99999888888877532    5999999999999999975  78999999999999999999999999999999999999


Q ss_pred             ecccCCCceeEeeCC-CCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 009759          430 IPEDQDGKIGYLFNP-GDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  488 (526)
Q Consensus       430 v~~~~~~~~g~~~~~-~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~  488 (526)
                      +   .++.+|+++++ +|+++++++|.++++|++.+++|+++|++.+ ++|+|+...+++.
T Consensus       349 i---~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~  406 (407)
T cd04946         349 V---DNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA  406 (407)
T ss_pred             h---cCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence            9   88889999876 4899999999999999999999999999999 5899999988874

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>PLN02275 transferase, transferring glycosyl groups

Probab=100.00  E-value=2.7e-32  Score=273.09  Aligned_cols=318  Identities=20%  Similarity=0.204  Sum_probs=225.6

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCC-eEEEEEeCCCCCc-c---ccCceeccccccCCCccccccchhc--
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGD-EVMVVTTHEGVPQ-E---FYGAKLIGSRSFPCPWYQKVPLSLA--  191 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~-~V~vi~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~--  191 (526)
                      -|+.+++-     ...|.+.++..++..|.++|+ +|++++....... +   ..++.+..... +. ..........  
T Consensus         5 ~~~~~~~~-----~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~-~~-~~~~~~~~~~~~   77 (371)
T PLN02275          5 GRAAVVVL-----GDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQ-PR-LLQRLPRVLYAL   77 (371)
T ss_pred             cEEEEEEe-----cCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCC-cc-cccccccchHHH
Confidence            35555543     226778889999999999875 7999987553221 1   12233333322 11 1111111111  


Q ss_pred             --------ccHHHHHH--HHhcCCCEEEECCCchH--HHHHHHHHHhcCCCEEEEEecCCcccc--cccccccccchHHH
Q 009759          192 --------LSPRIISE--VARFKPDIIHASSPGIM--VFGALIIAKLLCVPIVMSYHTHVPVYI--PRYTFSWLVKPMWL  257 (526)
Q Consensus       192 --------~~~~l~~~--l~~~~pDiV~~~~~~~~--~~~~~~~~~~~~~p~v~~~h~~~~~~~--~~~~~~~~~~~~~~  257 (526)
                              ....+...  .+..+||+||++.+...  .+.+.++++..+.|+|+++|+.+....  .........+....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~  157 (371)
T PLN02275         78 ALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRW  157 (371)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHH
Confidence                    11122222  35679999999875432  234556677789999999998642111  11111223345567


Q ss_pred             HHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEeccccccc
Q 009759          258 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS  337 (526)
Q Consensus       258 ~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg  337 (526)
                      +++.+++.+|.++++|+.+++.+.+.++.+   +.+|+|+. .+.|.+......    .  ..++..+++++|++.+.||
T Consensus       158 ~e~~~~~~ad~ii~~S~~~~~~l~~~~g~~---i~vi~n~~-~~~f~~~~~~~~----~--~~~~~~~i~~~grl~~~k~  227 (371)
T PLN02275        158 YERHYGKMADGHLCVTKAMQHELDQNWGIR---ATVLYDQP-PEFFRPASLEIR----L--RPNRPALVVSSTSWTPDED  227 (371)
T ss_pred             HHHHHHhhCCEEEECCHHHHHHHHHhcCCC---eEEECCCC-HHHcCcCCchhc----c--cCCCcEEEEEeCceeccCC
Confidence            889999999999999999999998765432   88999985 455554322111    1  1234457789999999999


Q ss_pred             HHHHHHHHHhC---------------------CCcEEEEEeCCccHHHHHHHhcCC---CeEEec-ccChhhHHHHHHcC
Q 009759          338 LDFLKRVMDRL---------------------PEARIAFIGDGPYREELEKMFTGM---PAVFTG-MLLGEELSQAYASG  392 (526)
Q Consensus       338 ~~~li~a~~~l---------------------~~~~l~ivG~g~~~~~l~~l~~~~---~V~~~g-~v~~~~l~~~~~~a  392 (526)
                      ++.+++|+..+                     ++++|+|+|+|+..+++++++++.   ++.+.+ +++.+++..+|+.|
T Consensus       228 ~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~a  307 (371)
T PLN02275        228 FGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSA  307 (371)
T ss_pred             HHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhC
Confidence            99999998754                     579999999999999999888754   477765 68999999999999


Q ss_pred             cEEEecCC---CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhh
Q 009759          393 DVFVMPSE---SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  458 (526)
Q Consensus       393 Dv~v~ps~---~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll  458 (526)
                      |++|+|+.   .|++|++++||||||+|||+++.||.+|++   +++.+|++++  |+++++++|.+++
T Consensus       308 Dv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv---~~g~~G~lv~--~~~~la~~i~~l~  371 (371)
T PLN02275        308 DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELV---KDGKNGLLFS--SSSELADQLLELL  371 (371)
T ss_pred             CEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHc---cCCCCeEEEC--CHHHHHHHHHHhC
Confidence            99998642   488999999999999999999999999999   8999999997  7999999998874

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=100.00  E-value=1.6e-32  Score=281.18  Aligned_cols=280  Identities=19%  Similarity=0.212  Sum_probs=213.9

Q ss_pred             cHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeC
Q 009759          193 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  272 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  272 (526)
                      ...+.+.+...++||+|++.+......  ++....++|+++++|+..-.......................+.+|.++++
T Consensus       200 ~~~f~~~L~~~~~di~i~dr~~~~~~~--~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~  277 (500)
T TIGR02918       200 IAYFLKQLNLTKKDIIILDRSTGIGQA--VLENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITA  277 (500)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCcccchH--HHhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEEC
Confidence            344445555668999999886544332  334556899999999743211111100000011111112235678999999


Q ss_pred             ChhHHHHHHHhcc---cCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC-
Q 009759          273 SVAIGKDLEAARV---TAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-  348 (526)
Q Consensus       273 S~~~~~~l~~~~~---~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l-  348 (526)
                      |+..++.+.+.+.   ....++.++|||++...+.+.            ...+...|+++||+.+.||++.+++|+..+ 
T Consensus       278 S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~------------~~r~~~~il~vGrl~~~Kg~~~li~A~~~l~  345 (500)
T TIGR02918       278 TDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPE------------QERKPFSIITASRLAKEKHIDWLVKAVVKAK  345 (500)
T ss_pred             CHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCcc------------cccCCeEEEEEeccccccCHHHHHHHHHHHH
Confidence            9998888776542   235789999999875544322            123456899999999999999999999754 


Q ss_pred             ---CCcEEEEEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          349 ---PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       349 ---~~~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                         |+++|+|+|+|+..+.+++++++.    +|.++|++   ++.++|+.||++|+||..||||++++||||||+|||++
T Consensus       346 ~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~  422 (500)
T TIGR02918       346 KSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGF  422 (500)
T ss_pred             hhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEe
Confidence               789999999999888888887654    58999975   68899999999999999999999999999999999999


Q ss_pred             CCC-CCCceecccCCCceeEeeCCC----C----HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009759          422 RAG-GIPDIIPEDQDGKIGYLFNPG----D----LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       422 ~~g-g~~e~v~~~~~~~~g~~~~~~----d----~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly  492 (526)
                      +++ |.+|++   +++.+|++++.+    |    +++++++|.+++ +++.+++|++++++.+++|||+.+++++. +++
T Consensus       423 dv~~G~~eiI---~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll-~~~~~~~~~~~a~~~a~~fs~~~v~~~w~-~ll  497 (500)
T TIGR02918       423 DVNYGNPTFI---EDNKNGYLIPIDEEEDDEDQIITALAEKIVEYF-NSNDIDAFHEYSYQIAEGFLTANIIEKWK-KLV  497 (500)
T ss_pred             cCCCCCHHHc---cCCCCEEEEeCCccccchhHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHhcCHHHHHHHHH-HHH
Confidence            986 899999   899999999842    3    889999999999 45678999999999889999999999997 677


Q ss_pred             HH
Q 009759          493 NA  494 (526)
Q Consensus       493 ~~  494 (526)
                      ++
T Consensus       498 ~~  499 (500)
T TIGR02918       498 RE  499 (500)
T ss_pred             hh
Confidence            65

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.2e-31  Score=263.61  Aligned_cols=377  Identities=21%  Similarity=0.224  Sum_probs=266.3

Q ss_pred             cEEEEE-eccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc-cCc-ee-----------------------
Q 009759          119 RRIALF-VEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF-YGA-KL-----------------------  172 (526)
Q Consensus       119 mkIliv-~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~-~~~-~~-----------------------  172 (526)
                      |||+++ .+..|+.+.||.+.++..+.++|++.|++|.|+.+.+...... .+. +.                       
T Consensus         1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (487)
T COG0297           1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD   80 (487)
T ss_pred             CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence            889888 5667999999999999999999999999999999876421110 000 00                       


Q ss_pred             --ccccccCCC-cccc----ccc-------hhcccHHHHHHHHh----cCCCEEEECCCchHHHHHHHHHH---hcCCCE
Q 009759          173 --IGSRSFPCP-WYQK----VPL-------SLALSPRIISEVAR----FKPDIIHASSPGIMVFGALIIAK---LLCVPI  231 (526)
Q Consensus       173 --~~~~~~~~~-~~~~----~~~-------~~~~~~~l~~~l~~----~~pDiV~~~~~~~~~~~~~~~~~---~~~~p~  231 (526)
                        .....+..+ .+.+    ...       ...+.......+..    ..|||||+|+|+.....+++...   ...+|.
T Consensus        81 ~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~t  160 (487)
T COG0297          81 GGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPT  160 (487)
T ss_pred             CCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCCe
Confidence              000000000 0010    000       01111122233322    36999999999877665554333   558999


Q ss_pred             EEEEecCCccccccc------ccc--------cccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh-cc--------cCC
Q 009759          232 VMSYHTHVPVYIPRY------TFS--------WLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA-RV--------TAA  288 (526)
Q Consensus       232 v~~~h~~~~~~~~~~------~~~--------~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~-~~--------~~~  288 (526)
                      |+|+|+..-......      ...        .........++..+..+|.+.++|+..++++... ++        ...
T Consensus       161 VfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~  240 (487)
T COG0297         161 VFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRS  240 (487)
T ss_pred             EEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhcc
Confidence            999998432211110      000        0000112567788899999999999999988721 11        123


Q ss_pred             CcEEEeecCCCCCCCCCCccc------------------HHHHHhhcCC-CCCCcEEEEEecccccccHHHHHHHHHhC-
Q 009759          289 NKIRIWKKGVDSESFHPRFRS------------------SEMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFLKRVMDRL-  348 (526)
Q Consensus       289 ~ki~vi~ngid~~~~~~~~~~------------------~~~~~~~~~~-~~~~~~i~~vG~l~~~Kg~~~li~a~~~l-  348 (526)
                      .++..|.||+|.+.|+|..+.                  ..+..++++. ..+.+.+.++||+..+||+|.+++++..+ 
T Consensus       241 ~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l  320 (487)
T COG0297         241 GKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELL  320 (487)
T ss_pred             ccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHH
Confidence            688999999999999886442                  2334445554 33679999999999999999999999877 


Q ss_pred             -CCcEEEEEeCCc--cHHHHHHHhcCC--CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCC
Q 009759          349 -PEARIAFIGDGP--YREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  423 (526)
Q Consensus       349 -~~~~l~ivG~g~--~~~~l~~l~~~~--~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~  423 (526)
                       ..++++++|.|+  .++.+..+.+..  ++.+....+..-.+.+|+.||++++||++|+||++.++||++|+++|+..+
T Consensus       321 ~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~t  400 (487)
T COG0297         321 EQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRET  400 (487)
T ss_pred             HhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEccc
Confidence             468999999883  455666666644  355555566667789999999999999999999999999999999999999


Q ss_pred             CCCCceeccc-----CCCceeEeeCCCCHHHHHHHHHHhhh---CHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 009759          424 GGIPDIIPED-----QDGKIGYLFNPGDLDDCLSKLEPLLY---NQEL-RETMGQAARQEMEKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       424 gg~~e~v~~~-----~~~~~g~~~~~~d~~~la~ai~~ll~---d~~~-~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~  494 (526)
                      ||++|.+.+-     ....+|+++.+.++++++.+|.+.+.   ++.. ++.+..++..  .+|+|+..++++. ++|+.
T Consensus       401 GGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~-~lY~~  477 (487)
T COG0297         401 GGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYV-ELYKP  477 (487)
T ss_pred             CCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHH-HHHHH
Confidence            9999999321     12579999999999999999998865   4333 6666665554  5899999999997 99999


Q ss_pred             HHHH
Q 009759          495 AIWF  498 (526)
Q Consensus       495 ~l~~  498 (526)
                      ++..
T Consensus       478 ~~~~  481 (487)
T COG0297         478 LLSK  481 (487)
T ss_pred             Hhcc
Confidence            8764

>PHA01630 putative group 1 glycosyl transferase

Probab=100.00  E-value=9.5e-31  Score=255.16  Aligned_cols=238  Identities=16%  Similarity=0.205  Sum_probs=185.5

Q ss_pred             HhcCCCEEEEEecCCcccccccccccccchHHHHHHHH-hhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCC
Q 009759          225 KLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFL-HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESF  303 (526)
Q Consensus       225 ~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~  303 (526)
                      ...|+|+++++|+..             +....++... .+.+|.++++|+..++.+.+.+....+++.+||||+|.+.|
T Consensus        66 ~~~~~~~v~e~~~~~-------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f  132 (331)
T PHA01630         66 PHVGKNIVFEVADTD-------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMF  132 (331)
T ss_pred             cccCCceEEEEEeec-------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHc
Confidence            446889999999821             1122445666 78899999999999999987754224689999999999888


Q ss_pred             CCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEEEEeCCccHHHHHHHhcCCCeEEecc
Q 009759          304 HPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYREELEKMFTGMPAVFTGM  379 (526)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~  379 (526)
                      .+....          ..+..+++++|++.+.||++.+++|++.+    ++++++++|++.....+..    . ..+.|.
T Consensus       133 ~~~~~~----------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~~l~~----~-~~~~~~  197 (331)
T PHA01630        133 EYKPKE----------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDPRLFG----L-NGVKTP  197 (331)
T ss_pred             CCCccc----------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccchhhcc----c-cceecc
Confidence            654211          23445677888899999999999999887    5789999997654332211    1 113566


Q ss_pred             cChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCC---------------
Q 009759          380 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP---------------  444 (526)
Q Consensus       380 v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~---------------  444 (526)
                      ++.+++..+|+.||++++||+.|+||++++||||||+|||+++.||..|++   .++.+|++++.               
T Consensus       198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i---~~~~ng~lv~~~~~~~~~~~~~~~~G  274 (331)
T PHA01630        198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWV---LSNLDVYWIKSGRKPKLWYTNPIHVG  274 (331)
T ss_pred             CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhc---cCCCceEEeeecccccccccCCcccc
Confidence            899999999999999999999999999999999999999999999999999   78777766642               


Q ss_pred             ----CCHHHHHHHHHHhhhC---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 009759          445 ----GDLDDCLSKLEPLLYN---QELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       445 ----~d~~~la~ai~~ll~d---~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~  494 (526)
                          .|.+++++++.+++.|   ++.++.+..+++...++|||++++++++ ++|++
T Consensus       275 ~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~-~l~~~  330 (331)
T PHA01630        275 YFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWE-KILEK  330 (331)
T ss_pred             cccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHhc
Confidence                2778899999998887   3445555555555568999999999997 77764

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=99.97  E-value=3.8e-30  Score=259.02  Aligned_cols=266  Identities=23%  Similarity=0.326  Sum_probs=211.6

Q ss_pred             cCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHH
Q 009759          203 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEA  282 (526)
Q Consensus       203 ~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~  282 (526)
                      .++|+++++.......  .+.......+.++++|+................ ........+..+|.+++.|+..++.+.+
T Consensus        98 ~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~ii~~s~~~~~~l~~  174 (372)
T cd04949          98 TKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN-FYEYVFENLDKVDGVIVATEQQKQDLQK  174 (372)
T ss_pred             CCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccch-hhHHHHhChhhCCEEEEccHHHHHHHHH
Confidence            6899999998655443  223344556788889974322211111111111 1122223467899999999999999988


Q ss_pred             hcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEEEEeC
Q 009759          283 ARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGD  358 (526)
Q Consensus       283 ~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~ivG~  358 (526)
                      .++. ..++.++|||++...+.+...          ...++..++++|++.+.||++.+++++..+    ++++|+|+|.
T Consensus       175 ~~~~-~~~v~~ip~g~~~~~~~~~~~----------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~  243 (372)
T cd04949         175 QFGN-YNPIYTIPVGSIDPLKLPAQF----------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGY  243 (372)
T ss_pred             HhCC-CCceEEEcccccChhhcccch----------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence            7763 345899999999887654310          134567899999999999999999999876    7899999999


Q ss_pred             CccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC-CCCceeccc
Q 009759          359 GPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG-GIPDIIPED  433 (526)
Q Consensus       359 g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g-g~~e~v~~~  433 (526)
                      |+....+..++...    +|.+.|+.  +++.++|+.||++|+||..||+|++++|||++|+|||+++.+ |..+++   
T Consensus       244 g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v---  318 (372)
T cd04949         244 GDEEEKLKELIEELGLEDYVFLKGYT--RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEII---  318 (372)
T ss_pred             CchHHHHHHHHHHcCCcceEEEcCCC--CCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHc---
Confidence            88777776666543    58999965  789999999999999999999999999999999999999987 789999   


Q ss_pred             CCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 009759          434 QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  487 (526)
Q Consensus       434 ~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~  487 (526)
                      .++.+|++++++|+++++++|.++++|++.++++++++++.+++|+|+.+++++
T Consensus       319 ~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w  372 (372)
T cd04949         319 EDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW  372 (372)
T ss_pred             ccCCCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence            889999999999999999999999999999999999999998899999998763

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.97  E-value=2.5e-29  Score=251.36  Aligned_cols=328  Identities=22%  Similarity=0.189  Sum_probs=234.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc---cCceeccccccCCCcccc------ccch
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF---YGAKLIGSRSFPCPWYQK------VPLS  189 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~  189 (526)
                      |||++++.     ..||+..++.+++++|.++||+|++++.........   .+..+..+..........      ....
T Consensus         2 ~~i~i~~~-----g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~   76 (357)
T PRK00726          2 KKILLAGG-----GTGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPKAGIEFHFIPSGGLRRKGSLANLKAPFKL   76 (357)
T ss_pred             cEEEEEcC-----cchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccccCCCcEEEEeccCcCCCChHHHHHHHHHH
Confidence            89988864     237888889999999999999999998755321111   122222222111110000      1112


Q ss_pred             hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEE
Q 009759          190 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  269 (526)
Q Consensus       190 ~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  269 (526)
                      +....++.+++++++||+||+|.+... +.+.++++..++|++++.|+..+.               ...+.+++.+|.+
T Consensus        77 ~~~~~~~~~~ik~~~pDvv~~~~~~~~-~~~~~~~~~~~~p~v~~~~~~~~~---------------~~~r~~~~~~d~i  140 (357)
T PRK00726         77 LKGVLQARKILKRFKPDVVVGFGGYVS-GPGGLAARLLGIPLVIHEQNAVPG---------------LANKLLARFAKKV  140 (357)
T ss_pred             HHHHHHHHHHHHhcCCCEEEECCCcch-hHHHHHHHHcCCCEEEEcCCCCcc---------------HHHHHHHHHhchh
Confidence            444557778888999999999985443 334556777899999876653221               2356677889999


Q ss_pred             EeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHH-HHHHhC
Q 009759          270 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLK-RVMDRL  348 (526)
Q Consensus       270 i~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li-~a~~~l  348 (526)
                      ++.++...   .+   .+..++.+++||++.+.+.+...    +.++.. ..+.++++++|+....+++..++ +|++++
T Consensus       141 i~~~~~~~---~~---~~~~~i~vi~n~v~~~~~~~~~~----~~~~~~-~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~  209 (357)
T PRK00726        141 ATAFPGAF---PE---FFKPKAVVTGNPVREEILALAAP----PARLAG-REGKPTLLVVGGSQGARVLNEAVPEALALL  209 (357)
T ss_pred             eECchhhh---hc---cCCCCEEEECCCCChHhhcccch----hhhccC-CCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence            99887442   12   36689999999999876654221    112222 34667888999888888765544 888877


Q ss_pred             CC--cEEEEEeCCccHHHHHHHhc-CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC
Q 009759          349 PE--ARIAFIGDGPYREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG  425 (526)
Q Consensus       349 ~~--~~l~ivG~g~~~~~l~~l~~-~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg  425 (526)
                      .+  ..++++|+|+..+..+. .+ +.+|++.|++  +++.++|+.||++|+.+    .+++++|||++|+|+|++..++
T Consensus       210 ~~~~~~~~~~G~g~~~~~~~~-~~~~~~v~~~g~~--~~~~~~~~~~d~~i~~~----g~~~~~Ea~~~g~Pvv~~~~~~  282 (357)
T PRK00726        210 PEALQVIHQTGKGDLEEVRAA-YAAGINAEVVPFI--DDMAAAYAAADLVICRA----GASTVAELAAAGLPAILVPLPH  282 (357)
T ss_pred             hhCcEEEEEcCCCcHHHHHHH-hhcCCcEEEeehH--hhHHHHHHhCCEEEECC----CHHHHHHHHHhCCCEEEecCCC
Confidence            54  45677898875444333 33 2248999998  79999999999999865    2689999999999999997653


Q ss_pred             C--------CceecccCCCceeEeeCCCC--HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          426 I--------PDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       426 ~--------~e~v~~~~~~~~g~~~~~~d--~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      .        .+.+   .+.++|++++.+|  +++++++|.++++|++.+++|++++++..+.++.+.+++.+.
T Consensus       283 ~~~~~~~~~~~~i---~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (357)
T PRK00726        283 AADDHQTANARAL---VDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGKPDAAERLADLIE  352 (357)
T ss_pred             CCcCcHHHHHHHH---HHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHH
Confidence            2        2445   5677899998877  999999999999999999999999999988999999998886

>PHA01633 putative glycosyl transferase group 1

Probab=99.97  E-value=1.7e-28  Score=236.14  Aligned_cols=305  Identities=17%  Similarity=0.193  Sum_probs=213.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      ||-++++-.     ......+...++..|++.|.-|++++.....+..   .+                           
T Consensus         1 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------------------------   45 (335)
T PHA01633          1 MKTAILTMN-----YSSISNVSEDIAEVLRENGEIVTITKNPFYIPKA---EK---------------------------   45 (335)
T ss_pred             CceEEEEec-----hhhhhhHHHHHHHHHHhCCcEEEEecCCcccCcc---ce---------------------------
Confidence            566666543     2567788899999999999988888754321111   00                           


Q ss_pred             HHHhcCCCEEEEC-CCch-HHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhH
Q 009759          199 EVARFKPDIIHAS-SPGI-MVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAI  276 (526)
Q Consensus       199 ~l~~~~pDiV~~~-~~~~-~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~  276 (526)
                             =||++. .+.. ..+....-....+.+++.++|+....              ..+.+. +.+.+.++++|+..
T Consensus        46 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tt~~g~~~~--------------~~y~~~-m~~~~~vIavS~~t  103 (335)
T PHA01633         46 -------LIVFIPFHPPSLNPYLYAYYQFKGKKYFYTTCDGIPNI--------------EIVNKY-LLQDVKFIPNSKFS  103 (335)
T ss_pred             -------EEEEeecCCcccchHHhhhhhhcCCCceEEeeCCcCch--------------HHHHHH-HhcCCEEEeCCHHH
Confidence                   012221 1111 11111111223357788888876531              122333 44466899999999


Q ss_pred             HHHHHHhcccCCCcEEEeecCCCCCCCCCCcc-cHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----C--
Q 009759          277 GKDLEAARVTAANKIRIWKKGVDSESFHPRFR-SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----P--  349 (526)
Q Consensus       277 ~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~--  349 (526)
                      ++.+.+.+. +.. + +|++|+|.+.|.+... ....+.++....++.++++++||+.++||++.+++|++.+    +  
T Consensus       104 ~~~L~~~G~-~~~-i-~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~  180 (335)
T PHA01633        104 AENLQEVGL-QVD-L-PVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDI  180 (335)
T ss_pred             HHHHHHhCC-CCc-e-eeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCc
Confidence            999998754 322 3 4789999998876532 2445555544335678899999999999999999999876    3  


Q ss_pred             --CcEEEEEeCCccHHHHHHHhcCCCeEEe---cccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          350 --EARIAFIGDGPYREELEKMFTGMPAVFT---GMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       350 --~~~l~ivG~g~~~~~l~~l~~~~~V~~~---g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                        +++++++|.+    .++++.-..+|++.   |+++.+++.++|++||++|+||..||||++++||||||+|||+++.|
T Consensus       181 ~~~i~l~ivG~~----~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~  256 (335)
T PHA01633        181 AKKIHFFVISHK----QFTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMP  256 (335)
T ss_pred             cccEEEEEEcHH----HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCC
Confidence              3577777742    33333333479998   56677899999999999999999999999999999999999999999


Q ss_pred             CCCceecc---------------cCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          425 GIPDIIPE---------------DQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       425 g~~e~v~~---------------~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      ++.|++..               +.+...|+.++..|+++++++|.+++...+ ....+.++++.+++|+|+++.++++
T Consensus       257 ~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~  334 (335)
T PHA01633        257 PLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFL  334 (335)
T ss_pred             CceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhh
Confidence            98887521               012235778888999999999999965432 2333667888889999999999885

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.97  E-value=3.1e-28  Score=243.00  Aligned_cols=317  Identities=20%  Similarity=0.200  Sum_probs=226.7

Q ss_pred             ccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc---cCceeccccccCCCcccc---c---cchhcccHHHHHHHHh
Q 009759          132 YVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF---YGAKLIGSRSFPCPWYQK---V---PLSLALSPRIISEVAR  202 (526)
Q Consensus       132 ~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~l~~~l~~  202 (526)
                      ..||+..++..++++|.++||+|++++.........   .+.++..+..........   .   .........+.+++++
T Consensus         8 ~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   87 (350)
T cd03785           8 GTGGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKAGIPLHTIPVGGLRRKGSLKKLKAPFKLLKGVLQARKILKK   87 (350)
T ss_pred             CchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhcccccCCceEEEEecCcCCCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence            447888999999999999999999998765422211   112222221111100000   0   0012334467788889


Q ss_pred             cCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHH
Q 009759          203 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEA  282 (526)
Q Consensus       203 ~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~  282 (526)
                      ++||+||++.+.. .+.+.++++..++|++++.|+.++.               ...+.+++.+|.++++|+...+.   
T Consensus        88 ~~pDvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~---------------~~~~~~~~~~~~vi~~s~~~~~~---  148 (350)
T cd03785          88 FKPDVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPG---------------LANRLLARFADRVALSFPETAKY---  148 (350)
T ss_pred             cCCCEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCcc---------------HHHHHHHHhhCEEEEcchhhhhc---
Confidence            9999999987643 3444566788899999766553321               23456677799999999988776   


Q ss_pred             hcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHH-HHHHHHHhCC--CcEE-EEEeC
Q 009759          283 ARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLD-FLKRVMDRLP--EARI-AFIGD  358 (526)
Q Consensus       283 ~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~-~li~a~~~l~--~~~l-~ivG~  358 (526)
                         .+..++.+++||+|.+.+.+...    +.+++. .++.++++++|+....|+.+ .+++++..++  ++++ +++|.
T Consensus       149 ---~~~~~~~~i~n~v~~~~~~~~~~----~~~~~~-~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~  220 (350)
T cd03785         149 ---FPKDKAVVTGNPVREEILALDRE----RARLGL-RPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGK  220 (350)
T ss_pred             ---CCCCcEEEECCCCchHHhhhhhh----HHhcCC-CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCC
Confidence               24579999999999876654311    333433 45667788888776777765 4568887774  5654 46788


Q ss_pred             CccHHHHHHHhcC--CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC--------Cc
Q 009759          359 GPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI--------PD  428 (526)
Q Consensus       359 g~~~~~l~~l~~~--~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~--------~e  428 (526)
                      | ..+++++.+++  .+|++.|++  +++.++|+.||++|.++.    +++++|||++|+|||+++.++.        .+
T Consensus       221 g-~~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~  293 (350)
T cd03785         221 G-DLEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVISRAG----ASTVAELAALGLPAILIPLPYAADDHQTANAR  293 (350)
T ss_pred             c-cHHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHH
Confidence            7 55677776654  489999998  799999999999997652    6899999999999999876541        34


Q ss_pred             eecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHH
Q 009759          429 IIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR  485 (526)
Q Consensus       429 ~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~  485 (526)
                      .+   .+..+|++++.+  |+++++++|.++++|++.+++|++++++.++.+..+++++
T Consensus       294 ~l---~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~  349 (350)
T cd03785         294 AL---VKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIAD  349 (350)
T ss_pred             HH---HhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence            55   566789999876  8999999999999999999999999998888777777654

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.97  E-value=6.1e-28  Score=242.02  Aligned_cols=334  Identities=16%  Similarity=0.125  Sum_probs=221.5

Q ss_pred             CccCchHHHHHHHHHHHHHCCCeEEEEEeCCC-CCccccCceeccccccC----CC------ccccc--cchhcccHHHH
Q 009759          131 SYVSGYKNRFQNFIKYLREMGDEVMVVTTHEG-VPQEFYGAKLIGSRSFP----CP------WYQKV--PLSLALSPRII  197 (526)
Q Consensus       131 ~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~-~~~~~~~~~~~~~~~~~----~~------~~~~~--~~~~~~~~~l~  197 (526)
                      ...++...+-+.++..|+++||.|.++....- ............+....    ..      .....  ...........
T Consensus        13 ~~w~~~~~~~qhl~~~~a~~~~~vl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (373)
T cd04950          13 DDWDFLWQRPQHLAARLAERGNRVLYVEPPGLSRTPQPRGRDWVRVVLRLRAALRRPRRLDPLIPARRRRLLRLLLNALL   92 (373)
T ss_pred             cCcCCCCCCHHHHHHHHHhCCCeEEEEeCCCccCCCCCCCcccEEeeecccccccCccccCccccchhhhHHHHHHHHHH
Confidence            34467778889999999999999999976432 11111111111110000    00      00000  00001111111


Q ss_pred             HHH---HhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCCh
Q 009759          198 SEV---ARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV  274 (526)
Q Consensus       198 ~~l---~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~  274 (526)
                      ...   .+.+..|++.+.+....+    .....+.++|++++|.++.....      .......++.+++.+|.++++|+
T Consensus        93 ~~~~~~~~~~~~i~~~~~P~~~~~----~~~~~~~~~Vyd~~D~~~~~~~~------~~~~~~~e~~~~~~ad~vi~~S~  162 (373)
T cd04950          93 FWAQLELGFGRPILWYYTPYTLPV----AALLQASLVVYDCVDDLSAFPGG------PPELLEAERRLLKRADLVFTTSP  162 (373)
T ss_pred             HHHHHhcCCCCcEEEEeCccHHHH----HhhcCCCeEEEEcccchhccCCC------CHHHHHHHHHHHHhCCEEEECCH
Confidence            111   134556666666544332    23367889999999977554321      11122678899999999999999


Q ss_pred             hHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCCCcEEE
Q 009759          275 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIA  354 (526)
Q Consensus       275 ~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~  354 (526)
                      .+.+.+...+    .++.+++||+|.+.|.+...........  ...++++++|+|++.+.++++.+.++++..++++|+
T Consensus       163 ~l~~~~~~~~----~~i~~i~ngvd~~~f~~~~~~~~~~~~~--~~~~~~~i~y~G~l~~~~d~~ll~~la~~~p~~~~v  236 (373)
T cd04950         163 SLYEAKRRLN----PNVVLVPNGVDYEHFAAARDPPPPPADL--AALPRPVIGYYGAIAEWLDLELLEALAKARPDWSFV  236 (373)
T ss_pred             HHHHHHhhCC----CCEEEcccccCHHHhhcccccCCChhHH--hcCCCCEEEEEeccccccCHHHHHHHHHHCCCCEEE
Confidence            9998887754    5899999999998886543221100011  234678999999999988999998888888999999


Q ss_pred             EEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCC-----CCCcHHHHHHHHcCCcEEEeCCCCCCce
Q 009759          355 FIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES-----ETLGLVVLEAMSSGIPVVGVRAGGIPDI  429 (526)
Q Consensus       355 ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~-----e~~~~~ilEAma~G~PvI~~~~gg~~e~  429 (526)
                      ++|.++.......+....||+++|+++++++..+|+.+|++++|+..     +++|+|++||||||+|||+++.+++.+.
T Consensus       237 liG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~~  316 (373)
T cd04950         237 LIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRRY  316 (373)
T ss_pred             EECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHhh
Confidence            99987333333333334589999999999999999999999999863     4689999999999999999986654332


Q ss_pred             ecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 009759          430 IPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRN  489 (526)
Q Consensus       430 v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~  489 (526)
                            ...++ +..+|+++++++|.+++.++......  ++++.+++|||++.++++++
T Consensus       317 ------~~~~~-~~~~d~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~  367 (373)
T cd04950         317 ------EDEVV-LIADDPEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLE  367 (373)
T ss_pred             ------cCcEE-EeCCCHHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHH
Confidence                  33344 44569999999999976543221111  22235579999999999973

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.96  E-value=4.1e-28  Score=244.51  Aligned_cols=342  Identities=15%  Similarity=0.132  Sum_probs=235.2

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc-cCc-------------eeccccc-cCC
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF-YGA-------------KLIGSRS-FPC  180 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~-~~~-------------~~~~~~~-~~~  180 (526)
                      .+.|||++++..+    .+|+...+..++++|.++||+|.++.+......+. ...             ..++... ...
T Consensus         2 ~~~~rili~t~~~----G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~   77 (380)
T PRK13609          2 IKNPKVLILTAHY----GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGVE   77 (380)
T ss_pred             CCCCeEEEEEcCC----CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhccC
Confidence            4668999998753    46899999999999999999977776544221110 000             0000000 000


Q ss_pred             Ccccccc---chhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHH
Q 009759          181 PWYQKVP---LSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWL  257 (526)
Q Consensus       181 ~~~~~~~---~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~  257 (526)
                      .......   ........+.+++++++||+||++.+... ...+..+...++|++..+++....                
T Consensus        78 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~-~~~~~~~~~~~ip~~~~~td~~~~----------------  140 (380)
T PRK13609         78 KIYDKKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIA-VPELKKQTGISIPTYNVLTDFCLH----------------  140 (380)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHH-HHHHHHhcCCCCCeEEEeCCCCCC----------------
Confidence            0000000   11112367888999999999999876433 333333445678987655553210                


Q ss_pred             HHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEeccccccc
Q 009759          258 VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS  337 (526)
Q Consensus       258 ~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg  337 (526)
                       .+++++.+|.+++.|+..++.+.+.+ .+.+++.+++++++... .+.......+.++++..+...++++.|++...|+
T Consensus       141 -~~~~~~~ad~i~~~s~~~~~~l~~~g-i~~~ki~v~G~p~~~~f-~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~  217 (380)
T PRK13609        141 -KIWVHREVDRYFVATDHVKKVLVDIG-VPPEQVVETGIPIRSSF-ELKINPDIIYNKYQLCPNKKILLIMAGAHGVLGN  217 (380)
T ss_pred             -cccccCCCCEEEECCHHHHHHHHHcC-CChhHEEEECcccChHH-cCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCcC
Confidence             12356789999999999999998865 46678888877665433 2222334456666653334445667788888899


Q ss_pred             HHHHHHHHHhCCCcEEEEEe-CC-ccHHHHHHHhcCC--CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHH
Q 009759          338 LDFLKRVMDRLPEARIAFIG-DG-PYREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  413 (526)
Q Consensus       338 ~~~li~a~~~l~~~~l~ivG-~g-~~~~~l~~l~~~~--~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma  413 (526)
                      ++.+++++...++++++++| .+ ...+.++++.++.  +|+++|++  +++.++|+.||++|.    ++.|++++|||+
T Consensus       218 ~~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a  291 (380)
T PRK13609        218 VKELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYV--ENIDELFRVTSCMIT----KPGGITLSEAAA  291 (380)
T ss_pred             HHHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEech--hhHHHHHHhccEEEe----CCCchHHHHHHH
Confidence            99999999877889988774 33 3566777766543  69999999  578999999999884    455899999999


Q ss_pred             cCCcEEEeC-CCCCC----ceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          414 SGIPVVGVR-AGGIP----DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       414 ~G~PvI~~~-~gg~~----e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      +|+|+|+++ .+|..    +++   .+  .|+.+...|+++++++|.++++|++.+++|++++++..+.++++.+++.++
T Consensus       292 ~g~PvI~~~~~~g~~~~n~~~~---~~--~G~~~~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~  366 (380)
T PRK13609        292 LGVPVILYKPVPGQEKENAMYF---ER--KGAAVVIRDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDIL  366 (380)
T ss_pred             hCCCEEECCCCCCcchHHHHHH---Hh--CCcEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence            999999976 55432    233   22  344444569999999999999999999999999988777889999999987


Q ss_pred             HHHHH
Q 009759          489 NEQYN  493 (526)
Q Consensus       489 ~~ly~  493 (526)
                       +++.
T Consensus       367 -~~~~  370 (380)
T PRK13609        367 -AENH  370 (380)
T ss_pred             -Hhhh
Confidence             4443

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.96  E-value=2.8e-27  Score=235.91  Aligned_cols=324  Identities=19%  Similarity=0.190  Sum_probs=218.9

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc---cCceeccccccCCCcc---ccc---cch
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF---YGAKLIGSRSFPCPWY---QKV---PLS  189 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~---~~~  189 (526)
                      |||+|++.     ..||+......++++|.++||+|++++.........   .+..+..+........   ..+   ...
T Consensus         1 ~~i~~~~g-----~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~~~   75 (348)
T TIGR01133         1 KKVVLAAG-----GTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVPKAGIEFYFIPVGGLRRKGSFRLIKTPLKL   75 (348)
T ss_pred             CeEEEEeC-----ccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccccCCCceEEEeccCcCCCChHHHHHHHHHH
Confidence            68987764     225665666799999999999999998644322111   1222222211110000   000   111


Q ss_pred             hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEE
Q 009759          190 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  269 (526)
Q Consensus       190 ~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  269 (526)
                      +.....+.+++++++||+||++..... +.+.++++..++|++++.++..+               ....+++++.+|.+
T Consensus        76 ~~~~~~l~~~i~~~~pDvVi~~~~~~~-~~~~~~~~~~~~p~v~~~~~~~~---------------~~~~~~~~~~~d~i  139 (348)
T TIGR01133        76 LKAVFQARRILKKFKPDAVIGFGGYVS-GPAGLAAKLLGIPLFHHEQNAVP---------------GLTNKLLSRFAKKV  139 (348)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEcCCccc-HHHHHHHHHcCCCEEEECCCCCc---------------cHHHHHHHHHhCee
Confidence            334457778899999999999975432 33445577788999854332211               12356678889999


Q ss_pred             EeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHH-HHHHHHhC
Q 009759          270 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDF-LKRVMDRL  348 (526)
Q Consensus       270 i~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~-li~a~~~l  348 (526)
                      +++|+.+++.+         +..+++||++...+.+...    +.+++. .++.++++++|+....|++.. ++++++.+
T Consensus       140 i~~~~~~~~~~---------~~~~i~n~v~~~~~~~~~~----~~~~~~-~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l  205 (348)
T TIGR01133       140 LISFPGAKDHF---------EAVLVGNPVRQEIRSLPVP----RERFGL-REGKPTILVLGGSQGAKILNELVPKALAKL  205 (348)
T ss_pred             EECchhHhhcC---------CceEEcCCcCHHHhcccch----hhhcCC-CCCCeEEEEECCchhHHHHHHHHHHHHHHH
Confidence            99999887654         2378999998765543211    122333 356778999998877888654 55788776


Q ss_pred             C--CcEEEEEeCCccHHHHHHHhcCCCe-EEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC
Q 009759          349 P--EARIAFIGDGPYREELEKMFTGMPA-VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG  425 (526)
Q Consensus       349 ~--~~~l~ivG~g~~~~~l~~l~~~~~V-~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg  425 (526)
                      .  ++++++++.+...+.+++..++.++ ....+.. .++.++|+.||++|.++   | +++++|||++|+|+|+++.++
T Consensus       206 ~~~~~~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~  280 (348)
T TIGR01133       206 AEKGIQIVHQTGKNDLEKVKNVYQELGIEAIVTFID-ENMAAAYAAADLVISRA---G-ASTVAELAAAGVPAILIPYPY  280 (348)
T ss_pred             hhcCcEEEEECCcchHHHHHHHHhhCCceEEecCcc-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCC
Confidence            3  4666444433344677776665542 3334443 38999999999999864   2 789999999999999998754


Q ss_pred             C-------CceecccCCCceeEeeCCCC--HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHH
Q 009759          426 I-------PDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR  485 (526)
Q Consensus       426 ~-------~e~v~~~~~~~~g~~~~~~d--~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~  485 (526)
                      .       .+++   .++.+|++++.+|  +++++++|.++++|++.+++|+++++++++.+..+.+++
T Consensus       281 ~~~~~~~~~~~i---~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~  346 (348)
T TIGR01133       281 AADDQYYNAKFL---EDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE  346 (348)
T ss_pred             CccchhhHHHHH---HHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence            2       2466   6788999998766  999999999999999999999999988877666666654

RL J Bacteriol 1993 Mar;175(6):1841-3

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.95  E-value=1.5e-26  Score=232.68  Aligned_cols=265  Identities=14%  Similarity=0.191  Sum_probs=201.0

Q ss_pred             HHHHHHHHhcCCCEEEECCCchHHHHHHHHHH-----hcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcE
Q 009759          194 PRIISEVARFKPDIIHASSPGIMVFGALIIAK-----LLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADL  268 (526)
Q Consensus       194 ~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~-----~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  268 (526)
                      .++.+++++++||+||++++......+..+.+     ..++|++..++|.....                ..++.+.+|.
T Consensus        90 ~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~----------------~~w~~~~~d~  153 (382)
T PLN02605         90 REVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH----------------PTWFHKGVTR  153 (382)
T ss_pred             HHHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC----------------cccccCCCCE
Confidence            56778899999999999765432222222222     34789888877753110                1234578999


Q ss_pred             EEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC
Q 009759          269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL  348 (526)
Q Consensus       269 ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l  348 (526)
                      ++++|+..++.+.+.+ .+.+++.+++++++.+.+.+.......+.++++ .++.++|+++|+....|++..+++++..+
T Consensus       154 ~~~~s~~~~~~l~~~g-~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl-~~~~~~il~~Gg~~g~~~~~~li~~l~~~  231 (382)
T PLN02605        154 CFCPSEEVAKRALKRG-LEPSQIRVYGLPIRPSFARAVRPKDELRRELGM-DEDLPAVLLMGGGEGMGPLEETARALGDS  231 (382)
T ss_pred             EEECCHHHHHHHHHcC-CCHHHEEEECcccCHhhccCCCCHHHHHHHcCC-CCCCcEEEEECCCcccccHHHHHHHHHHh
Confidence            9999999999998876 477899999999987765544455667777766 46778999999998899999998888652


Q ss_pred             --------CCcE-EEEEeCCc-cHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcE
Q 009759          349 --------PEAR-IAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  418 (526)
Q Consensus       349 --------~~~~-l~ivG~g~-~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~Pv  418 (526)
                              ++.+ ++++|.+. ..+.+++.....+|+++|++  +++.++|++||++|.++    .|++++|||+||+|+
T Consensus       232 ~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EAma~g~Pv  305 (382)
T PLN02605        232 LYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRGFV--TNMEEWMGACDCIITKA----GPGTIAEALIRGLPI  305 (382)
T ss_pred             hccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEecc--ccHHHHHHhCCEEEECC----CcchHHHHHHcCCCE
Confidence                    4565 56778764 34556555334479999999  58999999999999754    478999999999999


Q ss_pred             EEeCC------CCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          419 VGVRA------GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN-QELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       419 I~~~~------gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d-~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      |+++.      |+. +.+   .+++.|+.+  .|+++++++|.+++.| ++.+++|++++++..+..+.+.+++.+.
T Consensus       306 I~~~~~pgqe~gn~-~~i---~~~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~  376 (382)
T PLN02605        306 ILNGYIPGQEEGNV-PYV---VDNGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLH  376 (382)
T ss_pred             EEecCCCccchhhH-HHH---HhCCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence            99984      333 334   345567655  5999999999999998 9999999999999888888888887775

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.95  E-value=2.7e-27  Score=241.85  Aligned_cols=276  Identities=18%  Similarity=0.188  Sum_probs=205.4

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  283 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~  283 (526)
                      ..|+|++|+++...++.++..+..+.|+++.+|..+|...--....    ....+.+.+ -.+|.+.+.+....+.+.+.
T Consensus       131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e~~~~lp----~~~~ll~~~-l~~D~igF~t~~~~~~Fl~~  205 (460)
T cd03788         131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLP----WREELLRGL-LGADLIGFQTERYARNFLSC  205 (460)
T ss_pred             CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCC----ChHHHHHHH-hcCCEEEECCHHHHHHHHHH
Confidence            5699999999888887777666678899999999887542211111    111233333 34999999987766555442


Q ss_pred             c----c------------cCCCcEEEeecCCCCCCCCCCcccHHHH----HhhcCCCCCCcEEEEEecccccccHHHHHH
Q 009759          284 R----V------------TAANKIRIWKKGVDSESFHPRFRSSEMR----WRLSNGEPDKPLIVHVGRLGVEKSLDFLKR  343 (526)
Q Consensus       284 ~----~------------~~~~ki~vi~ngid~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~  343 (526)
                      .    +            ....++.++|||||.+.|.+.......+    .... ...++++|+++||+++.||++.+++
T Consensus       206 ~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~il~vgRl~~~Kgi~~ll~  284 (460)
T cd03788         206 CSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRE-RLGGRKLIVGVDRLDYSKGIPERLL  284 (460)
T ss_pred             HHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHH-hcCCCEEEEEecCccccCCHHHHHH
Confidence            1    0            1224688999999998886543322221    1122 2457789999999999999999999


Q ss_pred             HHHhC----CC----cEEEEEeCC-----ccH----HHHHHHhcC----------CCeE-EecccChhhHHHHHHcCcEE
Q 009759          344 VMDRL----PE----ARIAFIGDG-----PYR----EELEKMFTG----------MPAV-FTGMLLGEELSQAYASGDVF  395 (526)
Q Consensus       344 a~~~l----~~----~~l~ivG~g-----~~~----~~l~~l~~~----------~~V~-~~g~v~~~~l~~~~~~aDv~  395 (526)
                      |++.+    |+    ++|+++|.+     +..    +++++++.+          .+|+ +.|.++.+++..+|+.||++
T Consensus       285 A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~  364 (460)
T cd03788         285 AFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVA  364 (460)
T ss_pred             HHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEE
Confidence            99765    44    578888642     222    333333221          1344 45788999999999999999


Q ss_pred             EecCCCCCCcHHHHHHHHcCCc----EEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhC-HHHHHHHHHH
Q 009759          396 VMPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN-QELRETMGQA  470 (526)
Q Consensus       396 v~ps~~e~~~~~ilEAma~G~P----vI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d-~~~~~~~~~~  470 (526)
                      |+||..||+|++++||||||+|    ||+++.+|..+..      .+|+++++.|+++++++|.+++++ ++.++.++++
T Consensus       365 v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~~------~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~  438 (460)
T cd03788         365 LVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEEL------SGALLVNPYDIDEVADAIHRALTMPLEERRERHRK  438 (460)
T ss_pred             EeCccccccCcccceeEEEecCCCceEEEeccccchhhc------CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            9999999999999999999999    9999888876653      568999999999999999999985 5788888899


Q ss_pred             HHHHHHhCCHHHHHHHHHHHH
Q 009759          471 ARQEMEKYDWRAATRTIRNEQ  491 (526)
Q Consensus       471 a~~~~~~fs~~~~~~~~~~~l  491 (526)
                      +++.+++|+++..++++++++
T Consensus       439 ~~~~v~~~~~~~w~~~~l~~l  459 (460)
T cd03788         439 LREYVRTHDVQAWANSFLDDL  459 (460)
T ss_pred             HHHHHHhCCHHHHHHHHHHhh
Confidence            999999999999999998654

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=99.95  E-value=3.6e-26  Score=228.85  Aligned_cols=289  Identities=16%  Similarity=0.192  Sum_probs=194.7

Q ss_pred             cCCCEEEECCCchHHHHHHHHH-HhcCCCEEEEEecCCcccc--ccc--ccc-------------cccchHHHHHHHHhh
Q 009759          203 FKPDIIHASSPGIMVFGALIIA-KLLCVPIVMSYHTHVPVYI--PRY--TFS-------------WLVKPMWLVIKFLHR  264 (526)
Q Consensus       203 ~~pDiV~~~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~--~~~--~~~-------------~~~~~~~~~~~~~~~  264 (526)
                      .++||+|+|.|... .+++.++ +..++|+|+|.|.......  ...  ...             ........+|+.+..
T Consensus       147 ~~~dViH~HeWm~g-~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~  225 (590)
T cd03793         147 EPAVVAHFHEWQAG-VGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH  225 (590)
T ss_pred             CCCeEEEEcchhHh-HHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence            47999999998544 4444444 5678999999997543221  110  000             000122347889999


Q ss_pred             cCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccH----------------HHHHhhcCCCCCCcEEEE
Q 009759          265 AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS----------------EMRWRLSNGEPDKPLIVH  328 (526)
Q Consensus       265 ~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~----------------~~~~~~~~~~~~~~~i~~  328 (526)
                      .||.++++|+.+++++...++.+.++  |+|||+|.+.|.+....+                .++.+++. ..++.+++|
T Consensus       226 ~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~-~~d~tli~f  302 (590)
T cd03793         226 CAHVFTTVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDF-DLDKTLYFF  302 (590)
T ss_pred             hCCEEEECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCC-CCCCeEEEE
Confidence            99999999999999999998877666  999999999987654211                11222222 346666666


Q ss_pred             -Eecccc-cccHHHHHHHHHhCC--------C---cEEEEEeCC------------ccHHHH----HH------------
Q 009759          329 -VGRLGV-EKSLDFLKRVMDRLP--------E---ARIAFIGDG------------PYREEL----EK------------  367 (526)
Q Consensus       329 -vG~l~~-~Kg~~~li~a~~~l~--------~---~~l~ivG~g------------~~~~~l----~~------------  367 (526)
                       +||+.. +||+|.+++|+.++.        +   +-|+++-.+            ...+++    ..            
T Consensus       303 ~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~  382 (590)
T cd03793         303 TAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEA  382 (590)
T ss_pred             EeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhH
Confidence             799988 999999999998871        2   223333211            000000    00            


Q ss_pred             ---------------------------------------------------------HhcC--C--CeEEec-ccC----
Q 009759          368 ---------------------------------------------------------MFTG--M--PAVFTG-MLL----  381 (526)
Q Consensus       368 ---------------------------------------------------------l~~~--~--~V~~~g-~v~----  381 (526)
                                                                               +.+.  .  .|.|++ +++    
T Consensus       383 ~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~  462 (590)
T cd03793         383 ALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNP  462 (590)
T ss_pred             hhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCC
Confidence                                                                     0000  0  134433 222    


Q ss_pred             --hhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceeccc-CCC-ceeEeeC-------CCCHHHH
Q 009759          382 --GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED-QDG-KIGYLFN-------PGDLDDC  450 (526)
Q Consensus       382 --~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~-~~~-~~g~~~~-------~~d~~~l  450 (526)
                        ..+..++|+.||++|+||.+||||++++||||||+|||+|+.+|+.+.+.+. .++ ..|+.+.       +.+.+++
T Consensus       463 ~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~L  542 (590)
T cd03793         463 LLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQL  542 (590)
T ss_pred             cCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHH
Confidence              1357789999999999999999999999999999999999999985544221 233 3566665       3467888


Q ss_pred             HHHHHHhhhCHHHHHHHHHHHH--HHHHhCCHHHHHHHHHHHHHHHHHH
Q 009759          451 LSKLEPLLYNQELRETMGQAAR--QEMEKYDWRAATRTIRNEQYNAAIW  497 (526)
Q Consensus       451 a~ai~~ll~d~~~~~~~~~~a~--~~~~~fs~~~~~~~~~~~ly~~~l~  497 (526)
                      +++|.++++. ..++++..+++  +..+.|+|++.++.|. +-|+.++.
T Consensus       543 a~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~-~A~~~Al~  589 (590)
T cd03793         543 TQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYR-KARQLALS  589 (590)
T ss_pred             HHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHhh
Confidence            9999998854 55666666554  5557899999999997 77777664

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.95  E-value=8.2e-26  Score=227.50  Aligned_cols=343  Identities=13%  Similarity=0.185  Sum_probs=229.1

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCC---eEEEEEeCCCCCccccCc-------------eeccccccCC
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGD---EVMVVTTHEGVPQEFYGA-------------KLIGSRSFPC  180 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~---~V~vi~~~~~~~~~~~~~-------------~~~~~~~~~~  180 (526)
                      +.|||||++..    .++|+......+.++|.++|.   +|.++-.-..........             ..++. .+..
T Consensus         4 ~~~~vlil~~~----~G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~Y~~~~~~~p~~y~~-~y~~   78 (391)
T PRK13608          4 QNKKILIITGS----FGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEAHPILTSICKKWYINSFKYFRNMYKG-FYYS   78 (391)
T ss_pred             CCceEEEEECC----CCchHHHHHHHHHHHHHhhCCCCceEEEeehHHhcCchHHHHHHHHHHHHHHHhHHHHHH-HHHc
Confidence            45899999864    347888889999999998864   465543211100000000             00000 0000


Q ss_pred             C--ccccccchhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHH
Q 009759          181 P--WYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLV  258 (526)
Q Consensus       181 ~--~~~~~~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~  258 (526)
                      .  ..............+.+++++++||+|+++.+... ...+..++..++|++...+|...   .              
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~~-~~~l~~~~~~~iP~~~v~td~~~---~--------------  140 (391)
T PRK13608         79 RPDKLDKCFYKYYGLNKLINLLIKEKPDLILLTFPTPV-MSVLTEQFNINIPVATVMTDYRL---H--------------  140 (391)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHhCcCEEEECCcHHH-HHHHHHhcCCCCCEEEEeCCCCc---c--------------
Confidence            0  00000111122357888999999999999876432 22222334458898765444310   0              


Q ss_pred             HHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccH
Q 009759          259 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSL  338 (526)
Q Consensus       259 ~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~  338 (526)
                      ..++.+.+|.+++.|+.+++.+.+.+ .+.+++.+++++++..... .......+.++++..++..++++.|+++..|++
T Consensus       141 ~~w~~~~~d~~~v~s~~~~~~l~~~g-i~~~ki~v~GiPv~~~f~~-~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~  218 (391)
T PRK13608        141 KNWITPYSTRYYVATKETKQDFIDVG-IDPSTVKVTGIPIDNKFET-PIDQKQWLIDNNLDPDKQTILMSAGAFGVSKGF  218 (391)
T ss_pred             cccccCCCCEEEECCHHHHHHHHHcC-CCHHHEEEECeecChHhcc-cccHHHHHHHcCCCCCCCEEEEECCCcccchhH
Confidence            11245789999999999999998865 4678899988888755432 223445555665533344456778999988999


Q ss_pred             HHHHHHH-HhCCCcEEEEE-eCCc-cHHHHHHHhc-CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHc
Q 009759          339 DFLKRVM-DRLPEARIAFI-GDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  414 (526)
Q Consensus       339 ~~li~a~-~~l~~~~l~iv-G~g~-~~~~l~~l~~-~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~  414 (526)
                      +.+++++ +..++++++++ |.+. ..+.+++... ..+|.+.|++  +++.++|+.||++|.    .+.|+++.|||++
T Consensus       219 ~~li~~~~~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~--~~~~~~~~~aDl~I~----k~gg~tl~EA~a~  292 (391)
T PRK13608        219 DTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYT--KHMNEWMASSQLMIT----KPGGITISEGLAR  292 (391)
T ss_pred             HHHHHHHHhcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEecc--chHHHHHHhhhEEEe----CCchHHHHHHHHh
Confidence            9999985 34478888665 5442 3345554432 2379999998  689999999999996    3468899999999


Q ss_pred             CCcEEEeCC-CCC----CceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 009759          415 GIPVVGVRA-GGI----PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRN  489 (526)
Q Consensus       415 G~PvI~~~~-gg~----~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~  489 (526)
                      |+|+|+++. +|.    ..++   .+.+.|+..  +|+++++++|.++++|++.+++|++++++..+.++++.+++.++ 
T Consensus       293 G~PvI~~~~~pgqe~~N~~~~---~~~G~g~~~--~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~-  366 (391)
T PRK13608        293 CIPMIFLNPAPGQELENALYF---EEKGFGKIA--DTPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLL-  366 (391)
T ss_pred             CCCEEECCCCCCcchhHHHHH---HhCCcEEEe--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHH-
Confidence            999999863 331    1223   344556554  49999999999999999999999999999888899999999997 


Q ss_pred             HHHHHHH
Q 009759          490 EQYNAAI  496 (526)
Q Consensus       490 ~ly~~~l  496 (526)
                      +++..+.
T Consensus       367 ~l~~~~~  373 (391)
T PRK13608        367 DLIGHSS  373 (391)
T ss_pred             HHhhhhh
Confidence            5665443

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.95  E-value=1.8e-26  Score=233.73  Aligned_cols=273  Identities=21%  Similarity=0.217  Sum_probs=209.0

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  283 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~  283 (526)
                      .-|+|++|+++.+.++.++..+....++.+..|..+|...--....     .+......+-.+|.|-+.+...++.+.+.
T Consensus       127 ~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~lp-----~r~~il~gll~~dligF~t~~~~~~Fl~~  201 (456)
T TIGR02400       127 PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLP-----WRRELLEGLLAYDLVGFQTYDDARNFLSA  201 (456)
T ss_pred             CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCC-----cHHHHHHHHhcCCEEEECCHHHHHHHHHH
Confidence            3489999999988888887677678899999998877532211111     11223334556999999999888877652


Q ss_pred             cc---------------cCCCcEEEeecCCCCCCCCCCcccH-------HHHHhhcCCCCCCcEEEEEecccccccHHHH
Q 009759          284 RV---------------TAANKIRIWKKGVDSESFHPRFRSS-------EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL  341 (526)
Q Consensus       284 ~~---------------~~~~ki~vi~ngid~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~l  341 (526)
                      ..               ....++.++|||||.+.|.+.....       .++.++    .++++|+++||+++.||++.+
T Consensus       202 ~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vIl~VgRLd~~KGi~~l  277 (456)
T TIGR02400       202 VSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL----KGRKLIIGVDRLDYSKGLPER  277 (456)
T ss_pred             HHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc----CCCeEEEEccccccccCHHHH
Confidence            11               1345688999999999886543221       122222    467789999999999999999


Q ss_pred             HHHHHhC----CC----cEEEEEe-----CCccHHHHHHHhcCC--------------CeE-EecccChhhHHHHHHcCc
Q 009759          342 KRVMDRL----PE----ARIAFIG-----DGPYREELEKMFTGM--------------PAV-FTGMLLGEELSQAYASGD  393 (526)
Q Consensus       342 i~a~~~l----~~----~~l~ivG-----~g~~~~~l~~l~~~~--------------~V~-~~g~v~~~~l~~~~~~aD  393 (526)
                      ++|++++    |+    +.|+++|     +++..+.+++.+++.              .+. +.|.++.+++..+|+.||
T Consensus       278 l~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaD  357 (456)
T TIGR02400       278 LLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAAD  357 (456)
T ss_pred             HHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCc
Confidence            9999875    44    5577774     334444444333211              233 456788999999999999


Q ss_pred             EEEecCCCCCCcHHHHHHHHcCCc----EEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHHHH
Q 009759          394 VFVMPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMG  468 (526)
Q Consensus       394 v~v~ps~~e~~~~~ilEAma~G~P----vI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~  468 (526)
                      ++|+||..||+|++++||||||+|    +|+|+.+|..+.+   .   +|+++++.|+++++++|.++++ +++++++..
T Consensus       358 v~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l---~---~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~  431 (456)
T TIGR02400       358 VGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQEL---N---GALLVNPYDIDGMADAIARALTMPLEEREERH  431 (456)
T ss_pred             EEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHh---C---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence            999999999999999999999999    9999999988888   3   6999999999999999999998 677888889


Q ss_pred             HHHHHHHHhCCHHHHHHHHHHHH
Q 009759          469 QAARQEMEKYDWRAATRTIRNEQ  491 (526)
Q Consensus       469 ~~a~~~~~~fs~~~~~~~~~~~l  491 (526)
                      +..++.+.+||+...++++++++
T Consensus       432 ~~~~~~v~~~~~~~W~~~~l~~l  454 (456)
T TIGR02400       432 RAMMDKLRKNDVQRWREDFLSDL  454 (456)
T ss_pred             HHHHHHHhhCCHHHHHHHHHHHh
Confidence            99999998999999999998654

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=99.95  E-value=1.1e-25  Score=230.27  Aligned_cols=334  Identities=16%  Similarity=0.166  Sum_probs=223.1

Q ss_pred             CchHHHHHHHHHHHHHCCCeEEEEEe--CCCCCccccCceeccccccCCCccccccchhcccHHHHHHHHhcCCCEEEEC
Q 009759          134 SGYKNRFQNFIKYLREMGDEVMVVTT--HEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHAS  211 (526)
Q Consensus       134 gG~~~~~~~l~~~L~~~G~~V~vi~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiV~~~  211 (526)
                      .|-...+..+++.|.+.++++.++..  ...............+.....|        +.....+.+++++++||++|++
T Consensus        60 ~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P--------~d~~~~~~~~l~~~~Pd~v~~~  131 (425)
T PRK05749         60 VGETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAQALFGDDVEHRYLP--------YDLPGAVRRFLRFWRPKLVIIM  131 (425)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHhcCCCceEEEec--------CCcHHHHHHHHHhhCCCEEEEE
Confidence            45678899999999998766444322  2211111000000001111111        1233578888999999999988


Q ss_pred             CCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcE
Q 009759          212 SPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKI  291 (526)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki  291 (526)
                      ..... ...+..++..++|+++..|.........      .+....+.+.+++.+|.++++|+..++.+.+.+. +.+ +
T Consensus       132 ~~~~~-~~~l~~~~~~~ip~vl~~~~~~~~s~~~------~~~~~~~~r~~~~~~d~ii~~S~~~~~~l~~~g~-~~~-i  202 (425)
T PRK05749        132 ETELW-PNLIAELKRRGIPLVLANARLSERSFKR------YQKFKRFYRLLFKNIDLVLAQSEEDAERFLALGA-KNE-V  202 (425)
T ss_pred             ecchh-HHHHHHHHHCCCCEEEEeccCChhhHHH------HHHHHHHHHHHHHhCCEEEECCHHHHHHHHHcCC-CCC-c
Confidence            54332 2233445778999998765432211111      1123456778899999999999999999998764 545 8


Q ss_pred             EEeecCCCCCCCCCCc---ccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEEEEeCCccH-H
Q 009759          292 RIWKKGVDSESFHPRF---RSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYR-E  363 (526)
Q Consensus       292 ~vi~ngid~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~ivG~g~~~-~  363 (526)
                      .+++|+ +.+.+.+..   .....+..++   .++++++++|+  ..|+.+.+++|++.+    ++++|+|+|+|+.+ +
T Consensus       203 ~vi~n~-~~d~~~~~~~~~~~~~~r~~~~---~~~~vil~~~~--~~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r~~  276 (425)
T PRK05749        203 TVTGNL-KFDIEVPPELAARAATLRRQLA---PNRPVWIAAST--HEGEEELVLDAHRALLKQFPNLLLILVPRHPERFK  276 (425)
T ss_pred             Eecccc-cccCCCChhhHHHHHHHHHHhc---CCCcEEEEeCC--CchHHHHHHHHHHHHHHhCCCcEEEEcCCChhhHH
Confidence            888884 333222211   1123333332   45677888876  367889999998764    78999999999875 6


Q ss_pred             HHHHHhcCCCe---EEeccc------------ChhhHHHHHHcCcEEEe-cCCCCCCcHHHHHHHHcCCcEEEeCC-CCC
Q 009759          364 ELEKMFTGMPA---VFTGML------------LGEELSQAYASGDVFVM-PSESETLGLVVLEAMSSGIPVVGVRA-GGI  426 (526)
Q Consensus       364 ~l~~l~~~~~V---~~~g~v------------~~~~l~~~~~~aDv~v~-ps~~e~~~~~ilEAma~G~PvI~~~~-gg~  426 (526)
                      ++++++++.++   .+.|..            ..+|+..+|+.||++++ +|..|++|.+++|||+||+|||+++. ++.
T Consensus       277 ~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~  356 (425)
T PRK05749        277 EVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNF  356 (425)
T ss_pred             HHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCH
Confidence            78887765432   222210            12689999999999666 56679999999999999999999864 556


Q ss_pred             CceecccCC-CceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 009759          427 PDIIPEDQD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  496 (526)
Q Consensus       427 ~e~v~~~~~-~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l  496 (526)
                      .++.   +. ..+|+++.++|+++++++|.++++|++.+++|++++++.+++.  ....++++ +++.+.+
T Consensus       357 ~e~~---~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~-~~l~~~l  421 (425)
T PRK05749        357 KEIF---ERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTL-QLLEPYL  421 (425)
T ss_pred             HHHH---HHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHH-HHHHHhc
Confidence            6665   32 2357777788999999999999999999999999999999654  35556665 5555544

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=99.94  E-value=2.9e-24  Score=211.60  Aligned_cols=308  Identities=15%  Similarity=0.096  Sum_probs=214.8

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      ||..++....+ ....|+..+-..+.+.+.+.|+++.-+........                      ........+..
T Consensus         1 m~~~~~~~~~~-~~~~a~~ka~~d~~~~~~~~g~~~~~~~~~~~~~~----------------------~~~~~~~~~~~   57 (333)
T PRK09814          1 MKVHITNLYGM-SGNSAALKAKNDVTKIAKQLGFEELGIYFYNIKRD----------------------SLSERSKRLDG   57 (333)
T ss_pred             CcEEEEecccc-cccchHHHHHHHHHHHHHHCCCeEeEEEecccccc----------------------hHHHHHHHHHH
Confidence            45434433223 55567888889999999999998876542111000                      00011224455


Q ss_pred             HHHhcCC-CEEEECCCchHH--HHH--HHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCC
Q 009759          199 EVARFKP-DIIHASSPGIMV--FGA--LIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS  273 (526)
Q Consensus       199 ~l~~~~p-DiV~~~~~~~~~--~~~--~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S  273 (526)
                      ++...++ |+||++.+....  +..  +...++.++|+|+++||.++......      ...+..++.+++.+|.++++|
T Consensus        58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~------~~~~~~~~~~~~~aD~iI~~S  131 (333)
T PRK09814         58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN------YYLMKEEIDMLNLADVLIVHS  131 (333)
T ss_pred             HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc------chhhHHHHHHHHhCCEEEECC
Confidence            6666778 999999876543  112  22233447999999999876532211      112466888999999999999


Q ss_pred             hhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCCCcEE
Q 009759          274 VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARI  353 (526)
Q Consensus       274 ~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l  353 (526)
                      +.+++.+.+.+. +..++.++++..+.....+. .          .....+.|+|+|++....++..      ..++++|
T Consensus       132 ~~~~~~l~~~g~-~~~~i~~~~~~~~~~~~~~~-~----------~~~~~~~i~yaG~l~k~~~l~~------~~~~~~l  193 (333)
T PRK09814        132 KKMKDRLVEEGL-TTDKIIVQGIFDYLNDIELV-K----------TPSFQKKINFAGNLEKSPFLKN------WSQGIKL  193 (333)
T ss_pred             HHHHHHHHHcCC-CcCceEeccccccccccccc-c----------cccCCceEEEecChhhchHHHh------cCCCCeE
Confidence            999999988754 55677777665443211111 0          1234568999999985433221      3468999


Q ss_pred             EEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCC-----------CCCCcHHHHHHHHcCCcEEEeC
Q 009759          354 AFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-----------SETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       354 ~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~-----------~e~~~~~ilEAma~G~PvI~~~  422 (526)
                      +++|+|+..+     ....+|+|+|+++.+++..+|+. |+.+++..           .-.+|.++.|+||+|+|||+++
T Consensus       194 ~i~G~g~~~~-----~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~  267 (333)
T PRK09814        194 TVFGPNPEDL-----ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS  267 (333)
T ss_pred             EEECCCcccc-----ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC
Confidence            9999987544     12348999999999999999998 76665432           1367999999999999999999


Q ss_pred             CCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 009759          423 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRT  486 (526)
Q Consensus       423 ~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~  486 (526)
                      .++..+++   +++.+|++++  +.++++++|.++  +++.+++|++++++..+++.--...++
T Consensus       268 ~~~~~~~V---~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~~~  324 (333)
T PRK09814        268 KAAIADFI---VENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFTKK  324 (333)
T ss_pred             CccHHHHH---HhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence            99999999   8899999998  888999999986  467789999999998866554443333

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.93  E-value=2.6e-24  Score=231.03  Aligned_cols=282  Identities=19%  Similarity=0.176  Sum_probs=210.6

Q ss_pred             CCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh-
Q 009759          205 PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA-  283 (526)
Q Consensus       205 pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~-  283 (526)
                      -|+|++|+++.+.++.++..+..+.++.+..|..+|...--....+     +.-....+-.+|.|-+.+....+.+.+. 
T Consensus       148 ~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~-----r~~il~gll~aDligF~t~~y~r~Fl~~~  222 (797)
T PLN03063        148 GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPS-----RSELLRAVLTADLIGFHTYDFARHFLSAC  222 (797)
T ss_pred             CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCC-----HHHHHHHHhcCCEEEeCCHHHHHHHHHHH
Confidence            3899999999998888888888899999999999886432222221     1122233456899999988888777651 


Q ss_pred             ----cc----------cCCCcEEEeecCCCCCCCCCCcccHHH---HHhhcCCCCCCcEEEEEecccccccHHHHHHHHH
Q 009759          284 ----RV----------TAANKIRIWKKGVDSESFHPRFRSSEM---RWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD  346 (526)
Q Consensus       284 ----~~----------~~~~ki~vi~ngid~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~  346 (526)
                          +.          ....++.++|+|||.+.|.+.......   ...+.....++++|+++||+++.||++.+++|++
T Consensus       223 ~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe  302 (797)
T PLN03063        223 TRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFE  302 (797)
T ss_pred             HHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHH
Confidence                10          122468899999999887543222111   1111111236778999999999999999999998


Q ss_pred             hC----CCc----EEEEEe-----CCccHHHHHHHhcCC--------------CeE-EecccChhhHHHHHHcCcEEEec
Q 009759          347 RL----PEA----RIAFIG-----DGPYREELEKMFTGM--------------PAV-FTGMLLGEELSQAYASGDVFVMP  398 (526)
Q Consensus       347 ~l----~~~----~l~ivG-----~g~~~~~l~~l~~~~--------------~V~-~~g~v~~~~l~~~~~~aDv~v~p  398 (526)
                      .+    |++    .|+.++     +++..+.+++.+.+.              .|+ +.+.++.+++..+|+.||++|+|
T Consensus       303 ~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvt  382 (797)
T PLN03063        303 KFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVT  382 (797)
T ss_pred             HHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeC
Confidence            75    554    344333     334444444333211              233 33578999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCCc----EEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHHHHHHHHH
Q 009759          399 SESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQ  473 (526)
Q Consensus       399 s~~e~~~~~ilEAma~G~P----vI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~~~a~~  473 (526)
                      |..||+|++++||||||+|    +|++..+|..+.+     +..|+++++.|+++++++|.++++ +++++++..+..++
T Consensus       383 SlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l-----~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~  457 (797)
T PLN03063        383 SLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL-----GAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQ  457 (797)
T ss_pred             ccccccCcchhhHheeecCCCCCEEeeCCcCchhhh-----cCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            9999999999999999999    9999999988877     557999999999999999999999 78888888899999


Q ss_pred             HHHhCCHHHHHHHHHHHHHHHHHH
Q 009759          474 EMEKYDWRAATRTIRNEQYNAAIW  497 (526)
Q Consensus       474 ~~~~fs~~~~~~~~~~~ly~~~l~  497 (526)
                      ++.+++|...++.++ .-++++..
T Consensus       458 ~v~~~~~~~Wa~~fl-~~l~~~~~  480 (797)
T PLN03063        458 YVKTHSAQKWADDFM-SELNDIIV  480 (797)
T ss_pred             hhhhCCHHHHHHHHH-HHHHHHhh
Confidence            999999999999998 44455443

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.92  E-value=2.8e-23  Score=193.51  Aligned_cols=220  Identities=35%  Similarity=0.513  Sum_probs=166.7

Q ss_pred             EEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHH
Q 009759          121 IALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEV  200 (526)
Q Consensus       121 Iliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  200 (526)
                      |++++.. +.+..||.+.+...+++.|.++||+|+++.                                .....+.+.+
T Consensus         1 i~~i~~~-~~~~~~G~~~~~~~l~~~L~~~g~~v~v~~--------------------------------~~~~~~~~~~   47 (229)
T cd01635           1 ILLVSTP-LLPGGGGVELVLLDLAKALARRGHEVEVVA--------------------------------LLLLLLLRIL   47 (229)
T ss_pred             Ceeeccc-cCCCCCCchhHHHHHHHHHHHcCCeEEEEE--------------------------------echHHHHHHH
Confidence            3455543 235589999999999999999999999997                                1234566677


Q ss_pred             HhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHH
Q 009759          201 ARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDL  280 (526)
Q Consensus       201 ~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l  280 (526)
                      ++.+||+||++++...........+..++|++++.|+.++........        .........++..           
T Consensus        48 ~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~--------~~~~~~~~~~~~~-----------  108 (229)
T cd01635          48 RGFKPDVVHAHGYYPAPLALLLAARLLGIPLVLTVHGVNRSLLEGVPL--------SLLALSIGLADKV-----------  108 (229)
T ss_pred             hhcCCCEEEEcCCCcHHHHHHHHHhhCCCCEEEEEcCccHhhcccCcH--------HHHHHHHhhcceE-----------
Confidence            778999999999766655444566778999999999987643322110        0011111111111           


Q ss_pred             HHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEEEE
Q 009759          281 EAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFI  356 (526)
Q Consensus       281 ~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~iv  356 (526)
                                                                     ++|++.+.||++.+++++..+    ++++++++
T Consensus       109 -----------------------------------------------~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~  141 (229)
T cd01635         109 -----------------------------------------------FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIA  141 (229)
T ss_pred             -----------------------------------------------EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence                                                           999999999999999999887    37999999


Q ss_pred             eCCccHHHHHH----HhcCCCeEEecccCh-hhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceec
Q 009759          357 GDGPYREELEK----MFTGMPAVFTGMLLG-EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIP  431 (526)
Q Consensus       357 G~g~~~~~l~~----l~~~~~V~~~g~v~~-~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~  431 (526)
                      |.+........    .....+|.+.|+++. +++..+++.||++++|+..|++|++++|||++|+|+|+++.++..|++ 
T Consensus       142 G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i-  220 (229)
T cd01635         142 GDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIV-  220 (229)
T ss_pred             eCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEE-
Confidence            98876665543    222337999999844 566666666999999999999999999999999999999999999988 


Q ss_pred             ccCCCceeEee
Q 009759          432 EDQDGKIGYLF  442 (526)
Q Consensus       432 ~~~~~~~g~~~  442 (526)
                        .++.+|+++
T Consensus       221 --~~~~~g~~~  229 (229)
T cd01635         221 --EDGLTGLLV  229 (229)
T ss_pred             --ECCCceEEC
Confidence              788888864

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.91  E-value=2.4e-23  Score=224.39  Aligned_cols=280  Identities=20%  Similarity=0.271  Sum_probs=204.3

Q ss_pred             CCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhc
Q 009759          205 PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR  284 (526)
Q Consensus       205 pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~  284 (526)
                      -|+|++|+++.+.++.++..+....++.+..|-.+|...--....     .+.-.-..+-.+|.|-+.+....+.+.+.-
T Consensus       134 ~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp-----~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~  208 (726)
T PRK14501        134 GDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLP-----WREEILEGLLGADLIGFHTYDYVRHFLSSV  208 (726)
T ss_pred             CCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCC-----ChHHHHHHHhcCCeEEeCCHHHHHHHHHHH
Confidence            499999999998888887777778899999999888533222211     112223345568999888888776654421


Q ss_pred             ----c-----------cCCCcEEEeecCCCCCCCCCCcccHHHH---HhhcCCCCCCcEEEEEecccccccHHHHHHHHH
Q 009759          285 ----V-----------TAANKIRIWKKGVDSESFHPRFRSSEMR---WRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD  346 (526)
Q Consensus       285 ----~-----------~~~~ki~vi~ngid~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~  346 (526)
                          +           ....++.++|+|||.+.|.+.......+   ..+.....++++|+++||+++.||+..+++|++
T Consensus       209 ~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~  288 (726)
T PRK14501        209 LRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFE  288 (726)
T ss_pred             HHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHH
Confidence                1           0123688999999999886543222111   111112346779999999999999999999998


Q ss_pred             hC----CC----cEEEEEeC----C-ccHHHH----HHHhcCC----------C-eEEecccChhhHHHHHHcCcEEEec
Q 009759          347 RL----PE----ARIAFIGD----G-PYREEL----EKMFTGM----------P-AVFTGMLLGEELSQAYASGDVFVMP  398 (526)
Q Consensus       347 ~l----~~----~~l~ivG~----g-~~~~~l----~~l~~~~----------~-V~~~g~v~~~~l~~~~~~aDv~v~p  398 (526)
                      ++    |+    ++|+++|.    | +..+++    ++++.+.          . +.+.|+++.+++..+|+.||++++|
T Consensus       289 ~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~  368 (726)
T PRK14501        289 RFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVT  368 (726)
T ss_pred             HHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEec
Confidence            75    43    67888872    3 222333    3332211          1 3467899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcC-----CcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhC-HHHHHHHHHHHH
Q 009759          399 SESETLGLVVLEAMSSG-----IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN-QELRETMGQAAR  472 (526)
Q Consensus       399 s~~e~~~~~ilEAma~G-----~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d-~~~~~~~~~~a~  472 (526)
                      |..||+|++++||||||     .||++...|+..++.       .|+++++.|+++++++|.+++.+ .+.+++..++++
T Consensus       369 S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~-------~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~  441 (726)
T PRK14501        369 PLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA-------EALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQ  441 (726)
T ss_pred             ccccccCcccceEEEEcCCCCceEEEecccchhHHhC-------cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence            99999999999999994     466677777777765       38999999999999999999985 345555566788


Q ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHH
Q 009759          473 QEMEKYDWRAATRTIRNEQYNAAIW  497 (526)
Q Consensus       473 ~~~~~fs~~~~~~~~~~~ly~~~l~  497 (526)
                      +.+++|||+.++++++ ..|+++..
T Consensus       442 ~~v~~~~~~~w~~~~l-~~l~~~~~  465 (726)
T PRK14501        442 ERLRRYDVHKWASDFL-DELREAAE  465 (726)
T ss_pred             HHHHhCCHHHHHHHHH-HHHHHHHh
Confidence            8889999999999998 66666544

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.90  E-value=2.7e-23  Score=185.14  Aligned_cols=152  Identities=38%  Similarity=0.759  Sum_probs=136.6

Q ss_pred             CCCCcEEEEEecccccccHHHHHHHHHhC-----CCcEEEEEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHH
Q 009759          320 EPDKPLIVHVGRLGVEKSLDFLKRVMDRL-----PEARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYA  390 (526)
Q Consensus       320 ~~~~~~i~~vG~l~~~Kg~~~li~a~~~l-----~~~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~  390 (526)
                      ..++++|+++|++.+.||++.+++++..+     +++.++|+|.+.....+...+...    ++.+.|.++.+++..+|+
T Consensus        12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~   91 (172)
T PF00534_consen   12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDELYK   91 (172)
T ss_dssp             -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHHH
T ss_pred             CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccccccccccccccccccccccccccccccccccccc
Confidence            56888999999999999999999999865     689999999777777776665533    699999999899999999


Q ss_pred             cCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHH
Q 009759          391 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQA  470 (526)
Q Consensus       391 ~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~  470 (526)
                      .||++|+||..|++|++++|||++|+|||+++.|+..+++   .++.+|+++++.|+++++++|.+++++++.++.|+++
T Consensus        92 ~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~---~~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~l~~~  168 (172)
T PF00534_consen   92 SSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEII---NDGVNGFLFDPNDIEELADAIEKLLNDPELRQKLGKN  168 (172)
T ss_dssp             HTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHS---GTTTSEEEESTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeccccccccccccccccccccccceeeccccCCceee---ccccceEEeCCCCHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999   8889999999999999999999999999999999999


Q ss_pred             HHHH
Q 009759          471 ARQE  474 (526)
Q Consensus       471 a~~~  474 (526)
                      ++++
T Consensus       169 ~~~~  172 (172)
T PF00534_consen  169 ARER  172 (172)
T ss_dssp             HHHH
T ss_pred             hcCC
Confidence            9874

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.90  E-value=5.5e-22  Score=200.14  Aligned_cols=333  Identities=17%  Similarity=0.140  Sum_probs=210.3

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCce-eccccccCCCcc----ccccchhcc
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAK-LIGSRSFPCPWY----QKVPLSLAL  192 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~  192 (526)
                      +|||++.+.     ..||.-.-.. ++++|++.++++.++.......+. .... ......++....    .........
T Consensus         1 ~~ki~i~~G-----gt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~   73 (380)
T PRK00025          1 PLRIAIVAG-----EVSGDLLGAG-LIRALKARAPNLEFVGVGGPRMQA-AGCESLFDMEELAVMGLVEVLPRLPRLLKI   73 (380)
T ss_pred             CceEEEEec-----CcCHHHHHHH-HHHHHHhcCCCcEEEEEccHHHHh-CCCccccCHHHhhhccHHHHHHHHHHHHHH
Confidence            379987764     3355554455 999999999999998865422111 1111 011111111100    111112345


Q ss_pred             cHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeC
Q 009759          193 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  272 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  272 (526)
                      ...+.+++++++||+||+++...........++..++|++++.+....        .+..    ...+.+.+.+|.+++.
T Consensus        74 ~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~--------~~~~----~~~~~~~~~~d~i~~~  141 (380)
T PRK00025         74 RRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVW--------AWRQ----GRAFKIAKATDHVLAL  141 (380)
T ss_pred             HHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchh--------hcCc----hHHHHHHHHHhhheeC
Confidence            567888899999999999864322222233456679999876554210        0111    1123357789999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEE-EEEecc-ccc-ccHHHHHHHHHhC-
Q 009759          273 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLI-VHVGRL-GVE-KSLDFLKRVMDRL-  348 (526)
Q Consensus       273 S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~vG~l-~~~-Kg~~~li~a~~~l-  348 (526)
                      ++..++.+.+.+.    ++.+++|++..... ........+.+++. .++.+++ ++.|+- ... ++++.++++++.+ 
T Consensus       142 ~~~~~~~~~~~g~----~~~~~G~p~~~~~~-~~~~~~~~~~~l~~-~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~  215 (380)
T PRK00025        142 FPFEAAFYDKLGV----PVTFVGHPLADAIP-LLPDRAAARARLGL-DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQ  215 (380)
T ss_pred             CccCHHHHHhcCC----CeEEECcCHHHhcc-cccChHHHHHHcCC-CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999888876542    36677766644322 11223455556654 3345554 455533 333 4468888877655 


Q ss_pred             ---CCcEEEEEeC-CccHHHHHHHhcCC---CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          349 ---PEARIAFIGD-GPYREELEKMFTGM---PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       349 ---~~~~l~ivG~-g~~~~~l~~l~~~~---~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                         ++++++++|. +...+.+++...+.   ++.+.    .+++..+|+.||++|++|     |.+.+|||++|+|+|+.
T Consensus       216 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~  286 (380)
T PRK00025        216 QRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLL----DGQKREAMAAADAALAAS-----GTVTLELALLKVPMVVG  286 (380)
T ss_pred             HhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEE----cccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEE
Confidence               5789999875 55667777766543   34442    258999999999999987     78888999999999977


Q ss_pred             -----------------CCCCCCceecccCCC--ceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHH
Q 009759          422 -----------------RAGGIPDIIPEDQDG--KIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRA  482 (526)
Q Consensus       422 -----------------~~gg~~e~v~~~~~~--~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~  482 (526)
                                       +.+++++++   .++  ..+++.+..|++++++++.++++|++.+++|++++.+..+.. -..
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-~~~  362 (380)
T PRK00025        287 YKVSPLTFWIAKRLVKVPYVSLPNLL---AGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQL-RCG  362 (380)
T ss_pred             EccCHHHHHHHHHHHcCCeeehHHHh---cCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-CCC
Confidence                             345556666   443  345667778999999999999999999999999886666543 223


Q ss_pred             HHHHHH
Q 009759          483 ATRTIR  488 (526)
Q Consensus       483 ~~~~~~  488 (526)
                      .++++.
T Consensus       363 a~~~~~  368 (380)
T PRK00025        363 ADERAA  368 (380)
T ss_pred             HHHHHH
Confidence            444444

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.90  E-value=4e-22  Score=199.76  Aligned_cols=343  Identities=17%  Similarity=0.151  Sum_probs=220.0

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCCCccccCceecccc-ccCCCcc----ccccchhcc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGVPQEFYGAKLIGSR-SFPCPWY----QKVPLSLAL  192 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~  192 (526)
                      |||++++..-|      .-..+..++++|.+. +.++.++.++........-.+..++. .+.....    .........
T Consensus         1 ~~i~~~~gtr~------~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   74 (365)
T TIGR00236         1 LKVSIVLGTRP------EAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPDYDLNIMSPGQTLGEITSNM   74 (365)
T ss_pred             CeEEEEEecCH------HHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeeeecCCCCCCHHHHHHHH
Confidence            79999976543      225578899999886 66777776654321100000011111 1111110    001112233


Q ss_pred             cHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHH-HhhcCcEEEe
Q 009759          193 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKF-LHRAADLTLV  271 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~ii~  271 (526)
                      ...+.+++++++||+||+|+.....+.+.++++..++|++...++... . ...  .....   ...+. ..+.+|.+++
T Consensus        75 ~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s-~-~~~--~~~~~---~~~r~~~~~~ad~~~~  147 (365)
T TIGR00236        75 LEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRT-G-DRY--SPMPE---EINRQLTGHIADLHFA  147 (365)
T ss_pred             HHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCc-C-CCC--CCCcc---HHHHHHHHHHHHhccC
Confidence            467888999999999999986666676778888999998754333210 0 000  00101   11232 3456899999


Q ss_pred             CChhHHHHHHHhcccCCCcEEEeecCC-CCCCCCCC-cccHHHHHhhcCCCCCCcEEEEEe-cc-cccccHHHHHHHHHh
Q 009759          272 PSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPR-FRSSEMRWRLSNGEPDKPLIVHVG-RL-GVEKSLDFLKRVMDR  347 (526)
Q Consensus       272 ~S~~~~~~l~~~~~~~~~ki~vi~ngi-d~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~vG-~l-~~~Kg~~~li~a~~~  347 (526)
                      +|+..++.+.+.+ .+.+++.+++|++ |...+... ......+.+++   .++.++++.| +. ...|+++.+++++..
T Consensus       148 ~s~~~~~~l~~~G-~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~---~~~~~vl~~~hr~~~~~k~~~~ll~a~~~  223 (365)
T TIGR00236       148 PTEQAKDNLLREN-VKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFG---EDKRYILLTLHRRENVGEPLENIFKAIRE  223 (365)
T ss_pred             CCHHHHHHHHHcC-CCcccEEEeCChHHHHHHHHHhhccchhHHHhcC---CCCCEEEEecCchhhhhhHHHHHHHHHHH
Confidence            9999999998875 5778999999996 43222111 11223333332   2334555555 43 345899999999987


Q ss_pred             C----CCcEEEEEeCC-c-cHHHHHHHhc-CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEE
Q 009759          348 L----PEARIAFIGDG-P-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  420 (526)
Q Consensus       348 l----~~~~l~ivG~g-~-~~~~l~~l~~-~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~  420 (526)
                      +    +++++++.|.+ + ..+.+.+... ..+|++.|.++..++..+++.||+++.+|     |..++|||++|+|||+
T Consensus       224 l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~  298 (365)
T TIGR00236       224 IVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGKPVLV  298 (365)
T ss_pred             HHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCCCEEE
Confidence            6    57888887643 2 2222333322 23799999999889999999999999887     5668999999999999


Q ss_pred             e-CCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          421 V-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       421 ~-~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      + +.|+.++.+   +++ .++++. .|++++++++.++++|++.+++++++...+.+..+++.+++.+.
T Consensus       299 ~~~~~~~~e~~---~~g-~~~lv~-~d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~  362 (365)
T TIGR00236       299 LRDTTERPETV---EAG-TNKLVG-TDKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELL  362 (365)
T ss_pred             CCCCCCChHHH---hcC-ceEEeC-CCHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHH
Confidence            6 678888888   655 455553 69999999999999999988888766533323455555555553

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.89  E-value=1.7e-21  Score=191.55  Aligned_cols=363  Identities=19%  Similarity=0.218  Sum_probs=241.0

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHH---------CCCeEEEEEeCCCCCc----------cccC---ceeccc
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLRE---------MGDEVMVVTTHEGVPQ----------EFYG---AKLIGS  175 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~---------~G~~V~vi~~~~~~~~----------~~~~---~~~~~~  175 (526)
                      .+++++..   |....||.++-....+-.+..         .|++|.+++.......          ...+   +.++..
T Consensus        34 ~~~~~~~~---~~~~~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~  110 (495)
T KOG0853|consen   34 FEHVTFIH---PDLGIGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGD  110 (495)
T ss_pred             chhheeec---cccccCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEe
Confidence            35676664   356778888888888888888         9999999997543321          0011   111111


Q ss_pred             cccCCCc---cccc-----cchhcc-cHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhc----CCCEEEEEecCCccc
Q 009759          176 RSFPCPW---YQKV-----PLSLAL-SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLL----CVPIVMSYHTHVPVY  242 (526)
Q Consensus       176 ~~~~~~~---~~~~-----~~~~~~-~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~----~~p~v~~~h~~~~~~  242 (526)
                      . .+...   ....     ...++. ...+.+++  ++.|.|++......   ..+.....    ...+.+++|.....+
T Consensus       111 ~-lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~--~~~d~~i~d~~~~~---~~l~~~~~~p~~~~~i~~~~h~~~~ll  184 (495)
T KOG0853|consen  111 W-LPRAMGQFLEQVAGCAYLRILRIPFGILFKWA--EKVDPIIEDFVSAC---VPLLKQLSGPDVIIKIYFYCHFPDSLL  184 (495)
T ss_pred             e-cCcccchhhhhhhccceeEEEEeccchhhhhh--hhhceeecchHHHH---HHHHHHhcCCcccceeEEeccchHHHh
Confidence            1 11111   0000     000111 11223333  46787777654221   12222333    255677777755444


Q ss_pred             cccc--ccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcc-cCCCcEEEeecCCCCCCCCCCcccH--HHHHh--
Q 009759          243 IPRY--TFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARV-TAANKIRIWKKGVDSESFHPRFRSS--EMRWR--  315 (526)
Q Consensus       243 ~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~-~~~~ki~vi~ngid~~~~~~~~~~~--~~~~~--  315 (526)
                      ..+.  ...+........+......+|.+++.+...+..+..... ....++.+.+.++|.+.+.+.....  +.+..  
T Consensus       185 a~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r  264 (495)
T KOG0853|consen  185 AKRLGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVR  264 (495)
T ss_pred             ccccCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccc
Confidence            4432  223334444566667778899999999999888876653 2334488888899987766421111  11111  


Q ss_pred             hcCC-CCCCcEEEEEecccccccHHHHHHHHHhC---------CCcEEEEEeCC----------ccHHHHHHHhcCC---
Q 009759          316 LSNG-EPDKPLIVHVGRLGVEKSLDFLKRVMDRL---------PEARIAFIGDG----------PYREELEKMFTGM---  372 (526)
Q Consensus       316 ~~~~-~~~~~~i~~vG~l~~~Kg~~~li~a~~~l---------~~~~l~ivG~g----------~~~~~l~~l~~~~---  372 (526)
                      .... ......+..+.++.+.||++++++++..+         ++.++.+.|+.          .+.+++.++++++   
T Consensus       265 ~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~  344 (495)
T KOG0853|consen  265 LYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL  344 (495)
T ss_pred             eeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc
Confidence            1111 22355667788899999999999988766         24678888832          1445666677655   


Q ss_pred             --CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHH--
Q 009759          373 --PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLD--  448 (526)
Q Consensus       373 --~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~--  448 (526)
                        .|.|+...+..+...+++.+++++..-..|.||++++|||+||+|||+++.||..|++   .++.+|+++++ +.+  
T Consensus       345 g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV---~~~~tG~l~dp-~~e~~  420 (495)
T KOG0853|consen  345 GQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIV---VHGVTGLLIDP-GQEAV  420 (495)
T ss_pred             CceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEE---EcCCcceeeCC-chHHH
Confidence              2667677776677777888887776555699999999999999999999999999999   99999999999 555  


Q ss_pred             -HHHHHHHHhhhCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHH
Q 009759          449 -DCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       449 -~la~ai~~ll~d~~~~~~~~~~a~~~~~-~fs~~~~~~~~~~~ly~~  494 (526)
                       .+++++.++..|+++|.+|+++++++++ .|+|.++.+++. .+...
T Consensus       421 ~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~-~~~~~  467 (495)
T KOG0853|consen  421 AELADALLKLRRDPELWARMGKNGLKRVKEMFSWQHYSERIA-SVLGK  467 (495)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HHhHh
Confidence             6999999999999999999999999995 699999998886 55543

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.89  E-value=3.2e-21  Score=193.37  Aligned_cols=322  Identities=16%  Similarity=0.140  Sum_probs=211.3

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCCCccc----cCceeccccccCCCcc----ccccchh
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGVPQEF----YGAKLIGSRSFPCPWY----QKVPLSL  190 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~  190 (526)
                      ||++++..-|      .-..+..++++|++. |+++.++.++......+    ..........+.....    .......
T Consensus         1 ~i~~~~gtr~------~~~~~~pl~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~   74 (363)
T cd03786           1 KILVVTGTRP------EYIKLAPLIRALKKDPGFELVLVVTGQHYDMEMGVTFFEILFIIKPDYDLLLGSDSQSLGAQTA   74 (363)
T ss_pred             CEEEEEecCH------HHHHHHHHHHHHhcCCCCCEEEEEeCCCCChhhhHHHHHhhCCCCCCEEEecCCCCCCHHHHHH
Confidence            5777765432      124578899999987 89999888764332221    0000000001111111    1112233


Q ss_pred             cccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEE
Q 009759          191 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  270 (526)
Q Consensus       191 ~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  270 (526)
                      .....+.+.+++.+||+||+|+.....+.+..+++..++|++...|+....... .    .   .......+.+.+|.++
T Consensus        75 ~~~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~~~-~----~---~~~~r~~~~~~ad~~~  146 (363)
T cd03786          75 GLLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFDRG-M----P---DEENRHAIDKLSDLHF  146 (363)
T ss_pred             HHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCCCC-C----C---chHHHHHHHHHhhhcc
Confidence            445677888888999999999865556666777888899988765543221000 0    0   0112233567889999


Q ss_pred             eCChhHHHHHHHhcccCCCcEEEeecCC-CCCCCCCCccc-HHHHHhhcCCCCCCcEEEEEecccc---cccHHHHHHHH
Q 009759          271 VPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFRS-SEMRWRLSNGEPDKPLIVHVGRLGV---EKSLDFLKRVM  345 (526)
Q Consensus       271 ~~S~~~~~~l~~~~~~~~~ki~vi~ngi-d~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~vG~l~~---~Kg~~~li~a~  345 (526)
                      ++++..++.+.+.+. +.+++.+++|++ |...+.+.... ...+...+. .+++.++++.|+...   .|+++.+++++
T Consensus       147 ~~s~~~~~~l~~~G~-~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~-~~~~~vlv~~~r~~~~~~~k~~~~l~~al  224 (363)
T cd03786         147 APTEEARRNLLQEGE-PPERIFVVGNTMIDALLRLLELAKKELILELLGL-LPKKYILVTLHRVENVDDGEQLEEILEAL  224 (363)
T ss_pred             CCCHHHHHHHHHcCC-CcccEEEECchHHHHHHHHHHhhccchhhhhccc-CCCCEEEEEeCCccccCChHHHHHHHHHH
Confidence            999999999988764 778999999985 43322211111 111223332 344556778888764   79999999999


Q ss_pred             HhCC--CcEEEEEeCCccHHHHHHHhc-----CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcE
Q 009759          346 DRLP--EARIAFIGDGPYREELEKMFT-----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  418 (526)
Q Consensus       346 ~~l~--~~~l~ivG~g~~~~~l~~l~~-----~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~Pv  418 (526)
                      +.+.  ++.+++.|++...+.+++...     ..+|.+.|....+++..+|+.||++|.+|.     ..+.|||++|+|+
T Consensus       225 ~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg-----gi~~Ea~~~g~Pv  299 (363)
T cd03786         225 AELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG-----GIQEEASFLGVPV  299 (363)
T ss_pred             HHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc-----cHHhhhhhcCCCE
Confidence            8874  367777677666667766543     247999998888999999999999999984     3579999999999


Q ss_pred             EEeCC-CCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHH
Q 009759          419 VGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETM  467 (526)
Q Consensus       419 I~~~~-gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~  467 (526)
                      |+++. +...+.+   ++| .++.+. .|+++++++|.++++++..+.+|
T Consensus       300 I~~~~~~~~~~~~---~~g-~~~~~~-~~~~~i~~~i~~ll~~~~~~~~~  344 (363)
T cd03786         300 LNLRDRTERPETV---ESG-TNVLVG-TDPEAILAAIEKLLSDEFAYSLM  344 (363)
T ss_pred             EeeCCCCccchhh---hee-eEEecC-CCHHHHHHHHHHHhcCchhhhcC
Confidence            99864 3444555   333 222232 37999999999999998776665

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.87  E-value=4.7e-19  Score=162.37  Aligned_cols=360  Identities=18%  Similarity=0.247  Sum_probs=248.0

Q ss_pred             CCCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-c---ccCceeccccccCCCccccccch
Q 009759          114 NNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-E---FYGAKLIGSRSFPCPWYQKVPLS  189 (526)
Q Consensus       114 ~~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~  189 (526)
                      .++++.++++++-.    + =|-+-++..-|..|++.|++|.++......+. +   ...+++.+....+  .....+..
T Consensus         8 ~~~~k~ra~vvVLG----D-vGRSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~hprI~ih~m~~l~--~~~~~p~~   80 (444)
T KOG2941|consen    8 NKSKKKRAIVVVLG----D-VGRSPRMQYHALSLAKLGFQVDLIGYVESIPLEELLNHPRIRIHGMPNLP--FLQGGPRV   80 (444)
T ss_pred             cccccceEEEEEec----c-cCCChHHHHHHHHHHHcCCeEEEEEecCCCChHHHhcCCceEEEeCCCCc--ccCCCchh
Confidence            45555677666532    1 36678899999999999999999997665322 1   1333444333333  11111111


Q ss_pred             --------hcccHHHHHHHHhcCCCEEEECCCchH--HHHHHHHHHhcCCCEEEEEecCCcc-cc--cccccccccchHH
Q 009759          190 --------LALSPRIISEVARFKPDIIHASSPGIM--VFGALIIAKLLCVPIVMSYHTHVPV-YI--PRYTFSWLVKPMW  256 (526)
Q Consensus       190 --------~~~~~~l~~~l~~~~pDiV~~~~~~~~--~~~~~~~~~~~~~p~v~~~h~~~~~-~~--~~~~~~~~~~~~~  256 (526)
                              +.+..-++.++....+|++.+++|...  ...+.++....+.+++++.|+.... ..  .......+.+..+
T Consensus        81 ~~l~lKvf~Qfl~Ll~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~  160 (444)
T KOG2941|consen   81 LFLPLKVFWQFLSLLWALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVR  160 (444)
T ss_pred             hhhHHHHHHHHHHHHHHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHH
Confidence                    111112233333568999999997533  2345556678899999999996432 11  1112234456677


Q ss_pred             HHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCC-----CCC----CCCCc-----------c-----cHH
Q 009759          257 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD-----SES----FHPRF-----------R-----SSE  311 (526)
Q Consensus       257 ~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid-----~~~----~~~~~-----------~-----~~~  311 (526)
                      ++++.+-+.||.-+|+++.+++.+.+..+..  +..+++.--.     .+.    |.+..           .     ...
T Consensus       161 ~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi~--ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~ta  238 (444)
T KOG2941|consen  161 WLEKYFGKLADYNLCVTKAMREDLIQNWGIN--RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTA  238 (444)
T ss_pred             HHHHHhhcccccchhhHHHHHHHHHHhcCCc--eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhh
Confidence            8999999999999999999999988877642  4444442111     000    10000           0     001


Q ss_pred             HHHhhc-----CCCCCCcEEEEEecccccccHHHHHHHHHhC-----------CCcEEEEEeCCccHHHHHHHhcCCC--
Q 009759          312 MRWRLS-----NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-----------PEARIAFIGDGPYREELEKMFTGMP--  373 (526)
Q Consensus       312 ~~~~~~-----~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l-----------~~~~l~ivG~g~~~~~l~~l~~~~~--  373 (526)
                      +..+..     ...+...+++...++.+..++..+++|+...           |.+-.+|.|.|+.++...+.+.+.+  
T Consensus       239 f~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlkE~Y~~~I~~~~~~  318 (444)
T KOG2941|consen  239 FTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLKEKYSQEIHEKNLQ  318 (444)
T ss_pred             HhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchhHHHHHHHHHhccc
Confidence            111111     1122344566777889999999999999732           6778889999999999998888774  


Q ss_pred             -eE-EecccChhhHHHHHHcCcEEEec--CC-CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHH
Q 009759          374 -AV-FTGMLLGEELSQAYASGDVFVMP--SE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLD  448 (526)
Q Consensus       374 -V~-~~g~v~~~~l~~~~~~aDv~v~p--s~-~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~  448 (526)
                       |. ...|+.-||...+++.||+.|+-  |. .-..|+++++-..||+||++-+...+.|++   ++++||++++  |.+
T Consensus       319 ~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELV---kh~eNGlvF~--Ds~  393 (444)
T KOG2941|consen  319 HVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELV---KHGENGLVFE--DSE  393 (444)
T ss_pred             ceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHH---hcCCCceEec--cHH
Confidence             43 35678889999999999988764  32 345799999999999999999999999999   9999999998  999


Q ss_pred             HHHHHHHHhhh----CHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          449 DCLSKLEPLLY----NQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       449 ~la~ai~~ll~----d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      ++++.+..++.    +.+...++.+++++. +...|+...++..
T Consensus       394 eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~RW~~~W~~~~  436 (444)
T KOG2941|consen  394 ELAEQLQMLFKNFPDNADELNQLKKNLREE-QELRWDESWERTA  436 (444)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHhhHHH-HhhhHHHHHHHhh
Confidence            99999999998    888899999988887 5677777666654

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.87  E-value=7.5e-20  Score=167.43  Aligned_cols=360  Identities=14%  Similarity=0.181  Sum_probs=237.5

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCC-eEEEEEeCCCCCcc---------ccCceec--cccccCCC-----
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGD-EVMVVTTHEGVPQE---------FYGAKLI--GSRSFPCP-----  181 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~-~V~vi~~~~~~~~~---------~~~~~~~--~~~~~~~~-----  181 (526)
                      ..+.|+..+  ....||+++++..-.+.+++.-- .+.|+..++-....         ..++...  .+....+.     
T Consensus        44 ktvgfFHPY--CNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~lV  121 (465)
T KOG1387|consen   44 KTVGFFHPY--CNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRYLV  121 (465)
T ss_pred             eEEEEeccc--ccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeeeee
Confidence            467777543  25567888999999999988743 33344333311110         0111111  00000000     


Q ss_pred             ---cccc---ccchhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccc------cccc---
Q 009759          182 ---WYQK---VPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVY------IPRY---  246 (526)
Q Consensus       182 ---~~~~---~~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------~~~~---  246 (526)
                         .+..   +...+...--..+.+-++.|||.+-.....+.+..  .++..++|++.++|...-..      ..+.   
T Consensus       122 ea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~--~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~  199 (465)
T KOG1387|consen  122 EASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPI--FRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSG  199 (465)
T ss_pred             ecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHH--HHHHccCceEEEEecccccHHHHHHHHhhhhcc
Confidence               0000   01111112223344556799998876554444432  34578999999999743210      0000   


Q ss_pred             ccccccchHH----HHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCC
Q 009759          247 TFSWLVKPMW----LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPD  322 (526)
Q Consensus       247 ~~~~~~~~~~----~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~  322 (526)
                      ...|..-.++    .+...+-..+|.+++.|.+..+.+.+...  ..++.+++.+.+.+.+..         ..+....+
T Consensus       200 ~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~--~~~~~iVyPPC~~e~lks---------~~~te~~r  268 (465)
T KOG1387|consen  200 ILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQ--SNTCSIVYPPCSTEDLKS---------KFGTEGER  268 (465)
T ss_pred             hhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhh--ccceeEEcCCCCHHHHHH---------HhcccCCc
Confidence            1122222222    33444557899999999999999988775  367788887776663322         22222456


Q ss_pred             CcEEEEEecccccccHHHHHH--HHH--hC------CCcEEEEEeCC---ccHHH---HHHHhcCC----CeEEecccCh
Q 009759          323 KPLIVHVGRLGVEKSLDFLKR--VMD--RL------PEARIAFIGDG---PYREE---LEKMFTGM----PAVFTGMLLG  382 (526)
Q Consensus       323 ~~~i~~vG~l~~~Kg~~~li~--a~~--~l------~~~~l~ivG~g---~~~~~---l~~l~~~~----~V~~~g~v~~  382 (526)
                      .+.++++|.+.+.|+.. +++  |+-  +.      ++++|+++|+-   ++.+.   ++.++.++    +|.|.-.+|.
T Consensus       269 ~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py  347 (465)
T KOG1387|consen  269 ENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPY  347 (465)
T ss_pred             ceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCH
Confidence            67899999999999988 433  321  11      46899999953   23333   33333333    6999999999


Q ss_pred             hhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC-CceecccCCCceeEeeCCCCHHHHHHHHHHhhh-C
Q 009759          383 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI-PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-N  460 (526)
Q Consensus       383 ~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~-~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d  460 (526)
                      +++..+|..|.+.|.....|.||+.+.|+||+|+.+|+.+.||. -|++.+.....+|++..  +.++.++++.+++. +
T Consensus       348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~  425 (465)
T KOG1387|consen  348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLN  425 (465)
T ss_pred             HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999988765 47776655567899986  88899999999988 7


Q ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 009759          461 QELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  497 (526)
Q Consensus       461 ~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~  497 (526)
                      ++.+..++++||..+.+|+-....+.+. ..+..+++
T Consensus       426 ~~~r~~~r~~AR~s~~RFsE~~F~kd~~-~~i~kll~  461 (465)
T KOG1387|consen  426 YDERNMMRRNARKSLARFGELKFDKDWE-NPICKLLE  461 (465)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHhHh-HHHHHhhc
Confidence            8889999999999999999999988886 55555553

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=99.86  E-value=2.7e-20  Score=187.32  Aligned_cols=275  Identities=17%  Similarity=0.096  Sum_probs=208.8

Q ss_pred             CCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhc
Q 009759          205 PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR  284 (526)
Q Consensus       205 pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~  284 (526)
                      -|+|++|+++.+.++.++..+....++-+..|..+|...--....+     +.-....+-.+|.|-+.+...++.+.+.-
T Consensus       133 ~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~-----r~~ll~glL~aDliGFqt~~y~~~Fl~~~  207 (487)
T TIGR02398       133 GATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPW-----REQIIGSLLCCDYIGFHIPRYVENFVDAA  207 (487)
T ss_pred             CCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCc-----hHHHHHHHhcCCeEEeCCHHHHHHHHHHH
Confidence            4899999999988888887777788999999998875432222111     12222334469999999988887665411


Q ss_pred             ----cc--------------------------------CCCcEEEeecCCCCCCCCCCccc-------HHHHHhhcCCCC
Q 009759          285 ----VT--------------------------------AANKIRIWKKGVDSESFHPRFRS-------SEMRWRLSNGEP  321 (526)
Q Consensus       285 ----~~--------------------------------~~~ki~vi~ngid~~~~~~~~~~-------~~~~~~~~~~~~  321 (526)
                          +.                                ..-++.++|.|||++.|......       ..++.++    .
T Consensus       208 ~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~----~  283 (487)
T TIGR02398       208 RGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSEL----A  283 (487)
T ss_pred             HHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHc----C
Confidence                10                                11237889999999988543221       1233333    3


Q ss_pred             CCcEEEEEecccccccHHHHHHHHHhC----C----CcEEEEEeCCc---------cHHHHHHHhcCC-------C----
Q 009759          322 DKPLIVHVGRLGVEKSLDFLKRVMDRL----P----EARIAFIGDGP---------YREELEKMFTGM-------P----  373 (526)
Q Consensus       322 ~~~~i~~vG~l~~~Kg~~~li~a~~~l----~----~~~l~ivG~g~---------~~~~l~~l~~~~-------~----  373 (526)
                      ++.+|+.++|++..||+...++|++++    |    ++.|+++|.+.         +..++++++.+.       +    
T Consensus       284 ~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv  363 (487)
T TIGR02398       284 GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPL  363 (487)
T ss_pred             CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccE
Confidence            678999999999999999999999876    5    47899888542         334455544432       1    


Q ss_pred             eEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCC----cEEEeCCCCCCceecccCCCceeEeeCCCCHHH
Q 009759          374 AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDD  449 (526)
Q Consensus       374 V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~----PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~  449 (526)
                      +.+.+.++.+++..+|+.|||++.++..||++++..|+++|+.    |+|.|..+|..+.+      ..+++++|.|+++
T Consensus       364 ~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l------~~AllVNP~d~~~  437 (487)
T TIGR02398       364 QFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL------KGALLTNPYDPVR  437 (487)
T ss_pred             EEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhc------CCCEEECCCCHHH
Confidence            5678999999999999999999999999999999999999988    99999999988766      3489999999999


Q ss_pred             HHHHHHHhhhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 009759          450 CLSKLEPLLYNQ-ELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       450 la~ai~~ll~d~-~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~  494 (526)
                      +|++|.+++..+ +++++..+..++.+.+++....++.+++++..+
T Consensus       438 ~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~~  483 (487)
T TIGR02398       438 MDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSPQ  483 (487)
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhhc
Confidence            999999999954 466666667778888999999999998666443

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.86  E-value=2.4e-18  Score=170.65  Aligned_cols=346  Identities=35%  Similarity=0.541  Sum_probs=229.1

Q ss_pred             CCccCchHHHHHHHHHHHHHC--CCeEEEEEeCCCCCccccCceeccccccCCCccccccchh-cccHHHHHHHHhcC-C
Q 009759          130 FSYVSGYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSL-ALSPRIISEVARFK-P  205 (526)
Q Consensus       130 ~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~-p  205 (526)
                      .+..||.+.....+...+...  ++.+..+.......   ............   ........ .............. +
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~   84 (381)
T COG0438          11 PPRVGGIERYVLELAKALRLLGRGHEVLVIAPEKLEG---LGIEVLRLPSVS---LPLLIVRLRPALLRLLLLLKRLLPY   84 (381)
T ss_pred             CCCCCcHHHHHHHHHHHHHhCCCEEEEEecCcccccc---cCcceeeccCcc---ccccccccCccchHHHHHhcccccc
Confidence            356688888888888888875  44444444311100   000111110000   00000000 11112222222223 5


Q ss_pred             CEEEECCCchHH--HHHHHHHHhcCCCEEEEEecCCcccccccccccc---cchHHH-HHHHHhhcCcEEEeCChhHHHH
Q 009759          206 DIIHASSPGIMV--FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWL---VKPMWL-VIKFLHRAADLTLVPSVAIGKD  279 (526)
Q Consensus       206 DiV~~~~~~~~~--~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~ad~ii~~S~~~~~~  279 (526)
                      |+++.+......  ..........+.+.+...|...............   ...... .........+.+++.+......
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (381)
T COG0438          85 DIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKEL  164 (381)
T ss_pred             ceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHHHHHHhccccccEEEECCHHHHHH
Confidence            899887653332  2234445666788888888865422111111100   000111 1111112478889999888666


Q ss_pred             HHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCC--CcEEEEEecccccccHHHHHHHHHhCCC----cEE
Q 009759          280 LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPD--KPLIVHVGRLGVEKSLDFLKRVMDRLPE----ARI  353 (526)
Q Consensus       280 l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~vG~l~~~Kg~~~li~a~~~l~~----~~l  353 (526)
                      +.....  ..++.+++++++.+.+.....        . ...+  ...++++|++.+.||++.+++++..+++    +.+
T Consensus       165 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~  233 (381)
T COG0438         165 LEALGV--PNKIVVIPNGIDTEKFAPARI--------G-LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKL  233 (381)
T ss_pred             HHHhCC--CCCceEecCCcCHHHcCcccc--------C-CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEE
Confidence            666653  247889999999987764200        0 1222  3689999999999999999999998843    789


Q ss_pred             EEEeCCccH-HHHHHHhc----CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCc
Q 009759          354 AFIGDGPYR-EELEKMFT----GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD  428 (526)
Q Consensus       354 ~ivG~g~~~-~~l~~l~~----~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e  428 (526)
                      +++|.++.. +.+..+..    ..+|.+.|+++.+++..+++.||++++|+..|++|++++|||++|+|||+++.++..+
T Consensus       234 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e  313 (381)
T COG0438         234 VIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPE  313 (381)
T ss_pred             EEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHH
Confidence            999988652 33443443    2469999999878888899999999999999999999999999999999999999999


Q ss_pred             eecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHH
Q 009759          429 IIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAI  496 (526)
Q Consensus       429 ~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~~l  496 (526)
                      ++   .++.+|+++...|.+++++++..++++.+.++.+.+.+++.+ +.|+|+..++.+. ++|....
T Consensus       314 ~~---~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  378 (381)
T COG0438         314 VV---EDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLL-ELYEELL  378 (381)
T ss_pred             Hh---cCCCceEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHH
Confidence            99   666668877776899999999999999888888888666666 6999999999987 6776654

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=99.82  E-value=2.2e-18  Score=178.84  Aligned_cols=293  Identities=16%  Similarity=0.155  Sum_probs=209.6

Q ss_pred             HHHHHHh--cCCCEEEECCCchHHHHHHHHHHh-------------cCCCEEEEEecCCccccccccccccc--------
Q 009759          196 IISEVAR--FKPDIIHASSPGIMVFGALIIAKL-------------LCVPIVMSYHTHVPVYIPRYTFSWLV--------  252 (526)
Q Consensus       196 l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~~~-------------~~~p~v~~~h~~~~~~~~~~~~~~~~--------  252 (526)
                      ..+.++.  .+||+||+|+++.......+....             .+..+++|+|+..+.-...+....+.        
T Consensus       151 ~l~~l~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~  230 (601)
T TIGR02094       151 GVRALRALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAA  230 (601)
T ss_pred             HHHHHHHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhh
Confidence            3344443  589999999998766554432211             14678999999655432111100000        


Q ss_pred             -------------c------hHHHHHHHHhhcCcEEEeCChhHHHHHHHhcc-------cCCCcEEEeecCCCCCCCCCC
Q 009759          253 -------------K------PMWLVIKFLHRAADLTLVPSVAIGKDLEAARV-------TAANKIRIWKKGVDSESFHPR  306 (526)
Q Consensus       253 -------------~------~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~-------~~~~ki~vi~ngid~~~~~~~  306 (526)
                                   .      ....+.+..+..+|.+.+||+...+.......       ....++.-|.||||...|.+.
T Consensus       231 ~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~  310 (601)
T TIGR02094       231 NLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAP  310 (601)
T ss_pred             HhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCH
Confidence                         0      11356777889999999999988875443222       113458889999999988764


Q ss_pred             cccHH-----------------------------H-------HHhh-------------------------cC-CCCCCc
Q 009759          307 FRSSE-----------------------------M-------RWRL-------------------------SN-GEPDKP  324 (526)
Q Consensus       307 ~~~~~-----------------------------~-------~~~~-------------------------~~-~~~~~~  324 (526)
                      ....-                             +       +..+                         ++ ..++.+
T Consensus       311 ~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~  390 (601)
T TIGR02094       311 ELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVL  390 (601)
T ss_pred             HHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCc
Confidence            21100                             0       0011                         00 245778


Q ss_pred             EEEEEecccccccHHHHHHHHHhC--------CCcEEEEEeCCc--------cHHHHHHHhcC--C--CeEEecccChhh
Q 009759          325 LIVHVGRLGVEKSLDFLKRVMDRL--------PEARIAFIGDGP--------YREELEKMFTG--M--PAVFTGMLLGEE  384 (526)
Q Consensus       325 ~i~~vG~l~~~Kg~~~li~a~~~l--------~~~~l~ivG~g~--------~~~~l~~l~~~--~--~V~~~g~v~~~~  384 (526)
                      ++++++|+..+||.++++.++.++        .+++|++.|.+.        ..+.+..+.++  .  +|.|+...+.+-
T Consensus       391 ~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~l  470 (601)
T TIGR02094       391 TIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINL  470 (601)
T ss_pred             EEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHH
Confidence            999999999999999998887665        369999999875        45556666655  2  677777767667


Q ss_pred             HHHHHHcCcEEEe-cCC-CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeC------------CCCHHHH
Q 009759          385 LSQAYASGDVFVM-PSE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN------------PGDLDDC  450 (526)
Q Consensus       385 l~~~~~~aDv~v~-ps~-~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~------------~~d~~~l  450 (526)
                      .+.+++.||+.++ |++ +|++|+.-+-||..|.+.+++-.|...|..    ++.+||.+.            ..|+++|
T Consensus       471 A~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~----~~~nGf~f~~~~~~~~~~~~d~~da~~l  546 (601)
T TIGR02094       471 ARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY----DGDNGWAIGDGEEYDDEEEQDRLDAEAL  546 (601)
T ss_pred             HHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC----CCCcEEEECCCccccccccccCCCHHHH
Confidence            7799999999999 999 999999999999999999999888887776    467999998            3789999


Q ss_pred             HHHHHHhh-----hC-----HHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH
Q 009759          451 LSKLEPLL-----YN-----QELRETMGQAARQEM-EKYDWRAATRTIRNEQY  492 (526)
Q Consensus       451 a~ai~~ll-----~d-----~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly  492 (526)
                      .++|++.+     ++     |..|.++.+++.+.. ..|||++++++|.+..|
T Consensus       547 ~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy  599 (601)
T TIGR02094       547 YDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY  599 (601)
T ss_pred             HHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence            99997655     22     456888888887775 58999999999985544

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.81  E-value=1.1e-18  Score=186.45  Aligned_cols=277  Identities=17%  Similarity=0.186  Sum_probs=206.2

Q ss_pred             CCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhc
Q 009759          205 PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR  284 (526)
Q Consensus       205 pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~  284 (526)
                      -|+|++|+++.+.++.++..+....++-+..|..+|...--....+    ...+. ..+-.||.|-+.+...++.+.+.-
T Consensus       232 gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~----r~elL-~glL~aDlIGFqT~~y~rhFl~~c  306 (934)
T PLN03064        232 GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPS----RSELL-RSVLAADLVGFHTYDYARHFVSAC  306 (934)
T ss_pred             CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCc----HHHHH-HHHhcCCeEEeCCHHHHHHHHHHH
Confidence            3899999999998888887788889999999998886432222221    11222 334569999999998888776411


Q ss_pred             ----cc-----------CCCcEEEeecCCCCCCCCCCcccH-------HHHHhhcCCCCCCcEEEEEecccccccHHHHH
Q 009759          285 ----VT-----------AANKIRIWKKGVDSESFHPRFRSS-------EMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLK  342 (526)
Q Consensus       285 ----~~-----------~~~ki~vi~ngid~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li  342 (526)
                          +.           ..-++.++|-|||.+.|.......       .++.++    .++.+|+.++|++..||+...+
T Consensus       307 ~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~----~g~kiIlgVDRLD~~KGI~~kL  382 (934)
T PLN03064        307 TRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERF----AGRKVMLGVDRLDMIKGIPQKI  382 (934)
T ss_pred             HHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHh----CCceEEEEeeccccccCHHHHH
Confidence                10           012366789999998875432221       233332    3577999999999999999999


Q ss_pred             HHHHhC----CCcE--EEEE-------eCCccHHH----HHHHhcCCC----------eEE-ecccChhhHHHHHHcCcE
Q 009759          343 RVMDRL----PEAR--IAFI-------GDGPYREE----LEKMFTGMP----------AVF-TGMLLGEELSQAYASGDV  394 (526)
Q Consensus       343 ~a~~~l----~~~~--l~iv-------G~g~~~~~----l~~l~~~~~----------V~~-~g~v~~~~l~~~~~~aDv  394 (526)
                      +|++++    |+++  ++++       |+++..+.    +.+++...|          |++ ...++.+++..+|+.|||
T Consensus       383 ~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV  462 (934)
T PLN03064        383 LAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDV  462 (934)
T ss_pred             HHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCE
Confidence            998874    5542  5554       34443343    333333222          443 344888999999999999


Q ss_pred             EEecCCCCCCcHHHHHHHHcCC----cEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHHHHH
Q 009759          395 FVMPSESETLGLVVLEAMSSGI----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQ  469 (526)
Q Consensus       395 ~v~ps~~e~~~~~ilEAma~G~----PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~~  469 (526)
                      +|++|..||++++..|||+|+.    ++|.+..+|..+.+     +..++++++.|.++++++|.+++. +++++++..+
T Consensus       463 ~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L-----~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~  537 (934)
T PLN03064        463 ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVAASIAQALNMPEEEREKRHR  537 (934)
T ss_pred             EEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh-----CCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            9999999999999999999954    44558888888877     446899999999999999999998 8899999999


Q ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHHH
Q 009759          470 AARQEMEKYDWRAATRTIRNEQYNAA  495 (526)
Q Consensus       470 ~a~~~~~~fs~~~~~~~~~~~ly~~~  495 (526)
                      ..++.+..+++..+++.+++++.+..
T Consensus       538 ~~~~~V~~~d~~~Wa~~fl~~L~~~~  563 (934)
T PLN03064        538 HNFMHVTTHTAQEWAETFVSELNDTV  563 (934)
T ss_pred             HHHhhcccCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999987776543

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.79  E-value=4.3e-17  Score=163.30  Aligned_cols=323  Identities=16%  Similarity=0.104  Sum_probs=198.3

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCce-eccccccCCC----ccccccchhcccH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAK-LIGSRSFPCP----WYQKVPLSLALSP  194 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~  194 (526)
                      ||++.+.     ..||+-.-. .++++|+++|+++.++..+....+. .+.+ ......+...    .............
T Consensus         7 ki~i~aG-----gtsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~-~g~~~~~~~~~l~v~G~~~~l~~~~~~~~~~~   79 (385)
T TIGR00215         7 TIALVAG-----EASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAA-EGCEVLYSMEELSVMGLREVLGRLGRLLKIRK   79 (385)
T ss_pred             eEEEEeC-----CccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHh-CcCccccChHHhhhccHHHHHHHHHHHHHHHH
Confidence            6766542     335554445 9999999999999999876432111 0100 0111111111    1112222334455


Q ss_pred             HHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCCh
Q 009759          195 RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV  274 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~  274 (526)
                      .+.+++++++||+|++.+...+.+.....++..|+|+++++.   |...     .|..    ...+.+.+.+|.+++.++
T Consensus        80 ~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~---P~~w-----aw~~----~~~r~l~~~~d~v~~~~~  147 (385)
T TIGR00215        80 EVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS---PQVW-----AWRK----WRAKKIEKATDFLLAILP  147 (385)
T ss_pred             HHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC---CcHh-----hcCc----chHHHHHHHHhHhhccCC
Confidence            778889999999999998644344344467888999996542   1110     0110    125667789999999999


Q ss_pred             hHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEE-e-cccc-cccHHHHHHHHHhC---
Q 009759          275 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHV-G-RLGV-EKSLDFLKRVMDRL---  348 (526)
Q Consensus       275 ~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v-G-~l~~-~Kg~~~li~a~~~l---  348 (526)
                      ...+.+...+    .++.++.|++..............+.++++ .++.++|+++ | |..+ .|++..++++++.+   
T Consensus       148 ~e~~~~~~~g----~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl-~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~  222 (385)
T TIGR00215       148 FEKAFYQKKN----VPCRFVGHPLLDAIPLYKPDRKSAREKLGI-DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ  222 (385)
T ss_pred             CcHHHHHhcC----CCEEEECCchhhhccccCCCHHHHHHHcCC-CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh
Confidence            9988887643    366678888744322111233445566655 4456666554 4 4444 67889999887765   


Q ss_pred             -CCcEEEEEe-CCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe-
Q 009759          349 -PEARIAFIG-DGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV-  421 (526)
Q Consensus       349 -~~~~l~ivG-~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~-  421 (526)
                       |++++++.+ .+...+.+++..+..    .|.+.+    .++..+|++||++|++|     |.+.+|+|++|+|+|.. 
T Consensus       223 ~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~y  293 (385)
T TIGR00215       223 EPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLID----GDARKAMFAADAALLAS-----GTAALEAALIKTPMVVGY  293 (385)
T ss_pred             CCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEEC----chHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEE
Confidence             577876654 444445555544322    344433    25678999999999998     77778999999998876 


Q ss_pred             CCCCC----------------CceecccCCCcee--EeeCCCCHHHHHHHHHHhhhCH----HHHHHHHHHHHHHHHhC
Q 009759          422 RAGGI----------------PDIIPEDQDGKIG--YLFNPGDLDDCLSKLEPLLYNQ----ELRETMGQAARQEMEKY  478 (526)
Q Consensus       422 ~~gg~----------------~e~v~~~~~~~~g--~~~~~~d~~~la~ai~~ll~d~----~~~~~~~~~a~~~~~~f  478 (526)
                      .+..+                ..++   .+....  ++-..-+++.+++.+.+++.|+    +.++++.+.-.+..+..
T Consensus       294 k~~pl~~~~~~~~~~~~~~~~~nil---~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l  369 (385)
T TIGR00215       294 RMKPLTFLIARRLVKTDYISLPNIL---ANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRI  369 (385)
T ss_pred             cCCHHHHHHHHHHHcCCeeeccHHh---cCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHh
Confidence            22211                1122   111111  1223347899999999999999    88888777666555444

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=4.9e-16  Score=151.52  Aligned_cols=327  Identities=18%  Similarity=0.184  Sum_probs=213.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCe-EEEEEeCCCCCccc---cCceeccccccCCCccccc------cc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDE-VMVVTTHEGVPQEF---YGAKLIGSRSFPCPWYQKV------PL  188 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~-V~vi~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~------~~  188 (526)
                      |+|++..     ...||+-.....++++|.++|++ |.++....+.....   .+.....+..-........      ..
T Consensus         1 ~~ivl~~-----gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~   75 (357)
T COG0707           1 KKIVLTA-----GGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQYGIEFELIPSGGLRRKGSLKLLKAPFK   75 (357)
T ss_pred             CeEEEEe-----CCCccchhHHHHHHHHHHhhCccEEEEecccccceeeeccccCceEEEEecccccccCcHHHHHHHHH
Confidence            4554544     34578888899999999999995 66665544332211   1222222221111111111      11


Q ss_pred             hhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcE
Q 009759          189 SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADL  268 (526)
Q Consensus       189 ~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  268 (526)
                      .+......++++++++||+|+..+... ..+..++++..++|++++..|..+.               ...+.+.+.++.
T Consensus        76 ~~~~~~~a~~il~~~kPd~vig~Ggyv-s~P~~~Aa~~~~iPv~ihEqn~~~G---------------~ank~~~~~a~~  139 (357)
T COG0707          76 LLKGVLQARKILKKLKPDVVIGTGGYV-SGPVGIAAKLLGIPVIIHEQNAVPG---------------LANKILSKFAKK  139 (357)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEecCCcc-ccHHHHHHHhCCCCEEEEecCCCcc---------------hhHHHhHHhhce
Confidence            233445677889999999999977533 3446677888999999988776543               234566777888


Q ss_pred             EEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEe-cccccccHHHHHHHHHh
Q 009759          269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG-RLGVEKSLDFLKRVMDR  347 (526)
Q Consensus       269 ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG-~l~~~Kg~~~li~a~~~  347 (526)
                      |.+.-+.     ...+ .+.+++.+..|.+..+... . .....+...   ..++++|+.+| +.+..+--+.+.++...
T Consensus       140 V~~~f~~-----~~~~-~~~~~~~~tG~Pvr~~~~~-~-~~~~~~~~~---~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~  208 (357)
T COG0707         140 VASAFPK-----LEAG-VKPENVVVTGIPVRPEFEE-L-PAAEVRKDG---RLDKKTILVTGGSQGAKALNDLVPEALAK  208 (357)
T ss_pred             eeecccc-----cccc-CCCCceEEecCcccHHhhc-c-chhhhhhhc---cCCCcEEEEECCcchhHHHHHHHHHHHHH
Confidence            8765554     1122 2456788999999877664 1 112222111   12566665555 55666655666777777


Q ss_pred             CCC-cEEEE-EeCCccHHHHHHHhcCCC-eEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          348 LPE-ARIAF-IGDGPYREELEKMFTGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       348 l~~-~~l~i-vG~g~~~~~l~~l~~~~~-V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      +.+ ++++. +|.+. .+++.....+.+ +++.++.  +++..+|+.||++|.    -+.++++.|..++|+|.|--..+
T Consensus       209 l~~~~~v~~~~G~~~-~~~~~~~~~~~~~~~v~~f~--~dm~~~~~~ADLvIs----RaGa~Ti~E~~a~g~P~IliP~p  281 (357)
T COG0707         209 LANRIQVIHQTGKND-LEELKSAYNELGVVRVLPFI--DDMAALLAAADLVIS----RAGALTIAELLALGVPAILVPYP  281 (357)
T ss_pred             hhhCeEEEEEcCcch-HHHHHHHHhhcCcEEEeeHH--hhHHHHHHhccEEEe----CCcccHHHHHHHhCCCEEEeCCC
Confidence            764 66544 45544 556665555555 8888888  789999999999994    44579999999999999987665


Q ss_pred             CC--------CceecccCCCceeEeeCCCC--HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 009759          425 GI--------PDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  487 (526)
Q Consensus       425 g~--------~e~v~~~~~~~~g~~~~~~d--~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~  487 (526)
                      ..        +..+   ++...|.+++..+  ++.+.+.|.+++++++..++|.+++++....-..+.+++.+
T Consensus       282 ~~~~~~Q~~NA~~l---~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~~~~  351 (357)
T COG0707         282 PGADGHQEYNAKFL---EKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIADLL  351 (357)
T ss_pred             CCccchHHHHHHHH---HhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence            33        1233   4556677776554  89999999999999999999999988776554555555444

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.75  E-value=1.6e-15  Score=149.77  Aligned_cols=322  Identities=19%  Similarity=0.199  Sum_probs=194.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCcccc-cc-----c---h
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQK-VP-----L---S  189 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~---~  189 (526)
                      ||.++++.    ..+||+-.-...++++|.+.||+|.+++...+..........+....++.....+ ..     .   .
T Consensus         1 ~~~i~~~~----GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~   76 (352)
T PRK12446          1 MKKIVFTG----GGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLV   76 (352)
T ss_pred             CCeEEEEc----CCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEeccCcCCCchHHHHHHHHHH
Confidence            44445544    3457777788999999999999999999776544332111111111111111111 01     1   1


Q ss_pred             hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEE
Q 009759          190 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  269 (526)
Q Consensus       190 ~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  269 (526)
                      .....+..+++++++||+|+.+.. +......++++..++|++++..+..+.               ...+.+.+.++.+
T Consensus        77 ~~~~~~~~~i~~~~kPdvvi~~Gg-y~s~p~~~aa~~~~~p~~i~e~n~~~g---------------~~nr~~~~~a~~v  140 (352)
T PRK12446         77 MKGVMDAYVRIRKLKPDVIFSKGG-FVSVPVVIGGWLNRVPVLLHESDMTPG---------------LANKIALRFASKI  140 (352)
T ss_pred             HHHHHHHHHHHHhcCCCEEEecCc-hhhHHHHHHHHHcCCCEEEECCCCCcc---------------HHHHHHHHhhCEE
Confidence            223345667889999999999874 344556788899999998755553321               3356778889998


Q ss_pred             EeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEe-cccccccH-HHHHHHHHh
Q 009759          270 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG-RLGVEKSL-DFLKRVMDR  347 (526)
Q Consensus       270 i~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG-~l~~~Kg~-~~li~a~~~  347 (526)
                      ++.-+...+.+      +.+++.++.+++..+.....  ....+..+++ .+++++|+.+| +... +.+ +.+.+++..
T Consensus       141 ~~~f~~~~~~~------~~~k~~~tG~Pvr~~~~~~~--~~~~~~~~~l-~~~~~~iLv~GGS~Ga-~~in~~~~~~l~~  210 (352)
T PRK12446        141 FVTFEEAAKHL------PKEKVIYTGSPVREEVLKGN--REKGLAFLGF-SRKKPVITIMGGSLGA-KKINETVREALPE  210 (352)
T ss_pred             EEEccchhhhC------CCCCeEEECCcCCccccccc--chHHHHhcCC-CCCCcEEEEECCccch-HHHHHHHHHHHHh
Confidence            87554322221      34688888888877654322  2334444544 34556665555 4443 444 555566665


Q ss_pred             C-CCcEEEE-EeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC
Q 009759          348 L-PEARIAF-IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG  425 (526)
Q Consensus       348 l-~~~~l~i-vG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg  425 (526)
                      + .++++++ +|.....+.... .  .++...+++. +++.++|+.||++|    .-+.++++.|++++|+|.|......
T Consensus       211 l~~~~~vv~~~G~~~~~~~~~~-~--~~~~~~~f~~-~~m~~~~~~adlvI----sr~G~~t~~E~~~~g~P~I~iP~~~  282 (352)
T PRK12446        211 LLLKYQIVHLCGKGNLDDSLQN-K--EGYRQFEYVH-GELPDILAITDFVI----SRAGSNAIFEFLTLQKPMLLIPLSK  282 (352)
T ss_pred             hccCcEEEEEeCCchHHHHHhh-c--CCcEEecchh-hhHHHHHHhCCEEE----ECCChhHHHHHHHcCCCEEEEcCCC
Confidence            5 3566544 564432222222 1  2455567752 57999999999999    3455889999999999999886531


Q ss_pred             ----CCc-----eecccCCCceeEeeC--CCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          426 ----IPD-----IIPEDQDGKIGYLFN--PGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       426 ----~~e-----~v~~~~~~~~g~~~~--~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                          ..+     .+   .+...+..+.  .-+++.+.+++.++++|++.+++   ++    +++...+.++++.
T Consensus       283 ~~~~~~Q~~Na~~l---~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~---~~----~~~~~~~aa~~i~  346 (352)
T PRK12446        283 FASRGDQILNAESF---ERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKT---AL----KKYNGKEAIQTII  346 (352)
T ss_pred             CCCCchHHHHHHHH---HHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHH---HH----HHcCCCCHHHHHH
Confidence                111     23   3344455543  23688999999999988766532   22    2344445555554

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.72  E-value=2e-17  Score=140.79  Aligned_cols=127  Identities=32%  Similarity=0.551  Sum_probs=93.4

Q ss_pred             cEEEEEecccccccHHHHHH-HHHhC----CCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEec
Q 009759          324 PLIVHVGRLGVEKSLDFLKR-VMDRL----PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  398 (526)
Q Consensus       324 ~~i~~vG~l~~~Kg~~~li~-a~~~l----~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~p  398 (526)
                      +.++++|++.+.|+++.+++ +++++    |+++|+|+|.++.  .++++ ...+|+++|++  +++.++++.||+++.|
T Consensus         3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--~l~~~-~~~~v~~~g~~--~e~~~~l~~~dv~l~p   77 (135)
T PF13692_consen    3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--ELKRL-RRPNVRFHGFV--EELPEILAAADVGLIP   77 (135)
T ss_dssp             EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---HHCCH-HHCTEEEE-S---HHHHHHHHC-SEEEE-
T ss_pred             ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--HHHHh-cCCCEEEcCCH--HHHHHHHHhCCEEEEE
Confidence            57899999999999999999 76555    7999999998765  35555 34499999999  6899999999999999


Q ss_pred             CC-CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhC
Q 009759          399 SE-SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  460 (526)
Q Consensus       399 s~-~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d  460 (526)
                      +. .++++++++|||++|+|||+++. +..++.   +....|+++ .+|+++++++|.++++|
T Consensus        78 ~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~---~~~~~~~~~-~~~~~~l~~~i~~l~~d  135 (135)
T PF13692_consen   78 SRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIV---EEDGCGVLV-ANDPEELAEAIERLLND  135 (135)
T ss_dssp             BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS------SEEEE--TT-HHHHHHHHHHHHH-
T ss_pred             eeCCCcCcHHHHHHHHhCCCEEECCc-chhhhe---eecCCeEEE-CCCHHHHHHHHHHHhcC
Confidence            86 67899999999999999999998 566666   445667776 77999999999999875

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=99.70  E-value=6.6e-15  Score=155.56  Aligned_cols=297  Identities=18%  Similarity=0.164  Sum_probs=210.0

Q ss_pred             cCCCEEEECCCchHHHHHH----HHHH----------hcCCCEEEEEecCCcccccccccccc-----------------
Q 009759          203 FKPDIIHASSPGIMVFGAL----IIAK----------LLCVPIVMSYHTHVPVYIPRYTFSWL-----------------  251 (526)
Q Consensus       203 ~~pDiV~~~~~~~~~~~~~----~~~~----------~~~~p~v~~~h~~~~~~~~~~~~~~~-----------------  251 (526)
                      .+||+||+|.++......-    ++..          ..+..+++|+|+..+.....+....+                 
T Consensus       247 ~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~~~  326 (778)
T cd04299         247 IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSRDR  326 (778)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCHHH
Confidence            4899999999877655441    1111          12467899999965432111110000                 


Q ss_pred             -------c----chHHHHHHHHhhcCcEEEeCChhHHHHHHHhcc-------cCCCcEEEeecCCCCCCCC-CCc-----
Q 009759          252 -------V----KPMWLVIKFLHRAADLTLVPSVAIGKDLEAARV-------TAANKIRIWKKGVDSESFH-PRF-----  307 (526)
Q Consensus       252 -------~----~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~-------~~~~ki~vi~ngid~~~~~-~~~-----  307 (526)
                             .    .....+.+..+..++.+.++|+-..+..++.+.       ....++.-|.|||+...|. |..     
T Consensus       327 ~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l~~  406 (778)
T cd04299         327 FLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVEEVPIGHVTNGVHVPTWVAPEMRELYD  406 (778)
T ss_pred             HhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcccCceeceeCCcchhhhcCHHHHHHHH
Confidence                   0    012366778889999999999987554444221       1145688999999999887 310     


Q ss_pred             -----------------------cc-------HHHHHhh-------------------------cC-CCCCCcEEEEEec
Q 009759          308 -----------------------RS-------SEMRWRL-------------------------SN-GEPDKPLIVHVGR  331 (526)
Q Consensus       308 -----------------------~~-------~~~~~~~-------------------------~~-~~~~~~~i~~vG~  331 (526)
                                             ..       ...+.++                         +. ..++.++|+|+.|
T Consensus       407 ~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarR  486 (778)
T cd04299         407 RYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARR  486 (778)
T ss_pred             HhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeec
Confidence                                   00       0011111                         00 2356678999999


Q ss_pred             ccccccHHHHHHHHHhC--------CCcEEEEEeCCc--------cHHHHHHHhcCC----CeEEecccChhhHHHHHHc
Q 009759          332 LGVEKSLDFLKRVMDRL--------PEARIAFIGDGP--------YREELEKMFTGM----PAVFTGMLLGEELSQAYAS  391 (526)
Q Consensus       332 l~~~Kg~~~li~a~~~l--------~~~~l~ivG~g~--------~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~  391 (526)
                      +..+|+.++++..+.++        .+++|++.|.+.        ..+.+.++.++.    +|.|+...+-+-...+++.
T Consensus       487 fa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~LvaG  566 (778)
T cd04299         487 FATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQG  566 (778)
T ss_pred             chhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHhh
Confidence            99999999998876655        369999999753        122444444421    5778777766667799999


Q ss_pred             CcEEEecCC--CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCC------------CCHHHHHHHHHHh
Q 009759          392 GDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP------------GDLDDCLSKLEPL  457 (526)
Q Consensus       392 aDv~v~ps~--~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~------------~d~~~la~ai~~l  457 (526)
                      ||+.++|++  .|.+|+.-+-||..|.+-+++-.|...|..    ++.+||.+..            .|.++|.+.|++-
T Consensus       567 ~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~----~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~  642 (778)
T cd04299         567 VDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY----DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENE  642 (778)
T ss_pred             hhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc----CCCCceEeCCCccccChhhcchhhHHHHHHHHHHH
Confidence            999999999  899999999999999999999999888876    5789999987            4667777777543


Q ss_pred             hh----C------HHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHhh
Q 009759          458 LY----N------QELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWFWRKKR  503 (526)
Q Consensus       458 l~----d------~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~~l~~~~~~~  503 (526)
                      +-    +      |..|.+|.+++...+ -+|||++++++|.+.+|.-+..+++...
T Consensus       643 i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~~~~~~~~~  699 (778)
T cd04299         643 VIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLPAARRGRRLA  699 (778)
T ss_pred             HHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHHHHHHHHhh
Confidence            32    3      667888888888887 5899999999999999988877766543

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=99.68  E-value=2.7e-16  Score=140.30  Aligned_cols=175  Identities=22%  Similarity=0.223  Sum_probs=104.0

Q ss_pred             EEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHH
Q 009759          121 IALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEV  200 (526)
Q Consensus       121 Iliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  200 (526)
                      |+++...  .+..||+++++.+++++|+++||+|++++..........  ...................+.....+.+.+
T Consensus         1 ili~~~~--~~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   76 (177)
T PF13439_consen    1 ILITNIF--LPNIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE--LVKIFVKIPYPIRKRFLRSFFFMRRLRRLI   76 (177)
T ss_dssp             -EEECC---TTSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST--EEEE---TT-SSTSS--HHHHHHHHHHHHH
T ss_pred             CEEEEec--CCCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh--ccceeeeeecccccccchhHHHHHHHHHHH
Confidence            3445443  467899999999999999999999999987765433322  111111111122223333445567888899


Q ss_pred             HhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcc-cccccccccccchHHHHHHHHhhcCcEEEeCChhHHHH
Q 009759          201 ARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV-YIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD  279 (526)
Q Consensus       201 ~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~  279 (526)
                      ++.+||+||+|........... ..  ++|++++.|+.+.. .................++.+++.+|.++++|+..++.
T Consensus        77 ~~~~~DiVh~~~~~~~~~~~~~-~~--~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~  153 (177)
T PF13439_consen   77 KKEKPDIVHIHGPPAFWIALLA-CR--KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDE  153 (177)
T ss_dssp             HHHT-SEEECCTTHCCCHHHHH-HH--CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHH
T ss_pred             HHcCCCeEEecccchhHHHHHh-cc--CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHH
Confidence            9999999999986544333222 22  99999999996631 01111111122222334555688999999999999999


Q ss_pred             HHHhcccCCCcEEEeecCCCCCCC
Q 009759          280 LEAARVTAANKIRIWKKGVDSESF  303 (526)
Q Consensus       280 l~~~~~~~~~ki~vi~ngid~~~~  303 (526)
                      +.+ ++.+..++.+|+||+|.+.|
T Consensus       154 l~~-~~~~~~ki~vI~ngid~~~F  176 (177)
T PF13439_consen  154 LIK-FGIPPEKIHVIYNGIDTDRF  176 (177)
T ss_dssp             HHH-HT--SS-EEE----B-CCCH
T ss_pred             HHH-hCCcccCCEEEECCccHHHc
Confidence            999 66678999999999999876

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=99.67  E-value=3.6e-15  Score=153.19  Aligned_cols=204  Identities=17%  Similarity=0.144  Sum_probs=160.5

Q ss_pred             HhhcCcEEEeCChhHHHHHHHhccc--CCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEe--ccccccc
Q 009759          262 LHRAADLTLVPSVAIGKDLEAARVT--AANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG--RLGVEKS  337 (526)
Q Consensus       262 ~~~~ad~ii~~S~~~~~~l~~~~~~--~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG--~l~~~Kg  337 (526)
                      .+..+|.+|+.++...+.+......  ...++..||.+.- ... +..           ....+..+++++  |+ +.|.
T Consensus       269 ~~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~-~~~-~~~-----------s~r~~~~~I~v~idrL-~ek~  334 (519)
T TIGR03713       269 SLSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDT-RLR-LGQ-----------SQQLYETEIGFWIDGL-SDEE  334 (519)
T ss_pred             ChhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccce-EEe-cCh-----------hhcccceEEEEEcCCC-ChHH
Confidence            4567899999998877777766531  1134566675433 211 110           123344678888  99 9999


Q ss_pred             HHHHHHHHHhC----CCcEEEEEeCCccH---HHHHHHhc----C-----------------------------CCeEEe
Q 009759          338 LDFLKRVMDRL----PEARIAFIGDGPYR---EELEKMFT----G-----------------------------MPAVFT  377 (526)
Q Consensus       338 ~~~li~a~~~l----~~~~l~ivG~g~~~---~~l~~l~~----~-----------------------------~~V~~~  377 (526)
                      ++.+++++.++    |+++|.+.|.+...   +.++++++    +                             ..|.|.
T Consensus       335 ~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~  414 (519)
T TIGR03713       335 LQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFT  414 (519)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEE
Confidence            99888877654    89999999966432   33332211    2                             368999


Q ss_pred             cccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHh
Q 009759          378 GMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPL  457 (526)
Q Consensus       378 g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~l  457 (526)
                      |+.+..++.+.|..+.++|.+|..||++ +++||+++|+|+|   .-|..+++   +++.||+++  +|..+|+++|..+
T Consensus       415 gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V---~d~~NG~li--~d~~~l~~al~~~  485 (519)
T TIGR03713       415 TLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYV---EHNKNGYII--DDISELLKALDYY  485 (519)
T ss_pred             ecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceee---EcCCCcEEe--CCHHHHHHHHHHH
Confidence            9998779999999999999999999999 9999999999999   44568999   999999999  5999999999999


Q ss_pred             hhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          458 LYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       458 l~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      +.++..++++...+.+.+++||-+++++++.
T Consensus       486 L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~  516 (519)
T TIGR03713       486 LDNLKNWNYSLAYSIKLIDDYSSENIIERLN  516 (519)
T ss_pred             HhCHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            9999999999999999999999999998885

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=99.62  E-value=2.4e-15  Score=131.68  Aligned_cols=158  Identities=22%  Similarity=0.256  Sum_probs=94.3

Q ss_pred             CchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHH--HhcCCCEEEEC
Q 009759          134 SGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEV--ARFKPDIIHAS  211 (526)
Q Consensus       134 gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--~~~~pDiV~~~  211 (526)
                      ||.+.++.+++++|.++||+|++++................+..++.+..............+.+++  ++.+||+||++
T Consensus         1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Dvv~~~   80 (160)
T PF13579_consen    1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDEEEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRERPDVVHAH   80 (160)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-SEEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT---SEEEEE
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccccccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhccCCeEEEec
Confidence            8999999999999999999999999876544321111112222223332222333444556777777  78899999999


Q ss_pred             CCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcE
Q 009759          212 SPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKI  291 (526)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki  291 (526)
                      ++. ..+.+.++.+..++|+|+++|+......    ..+....+..+++..++.+|.++++|+..++.+.+.+ .+.+++
T Consensus        81 ~~~-~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~~g-~~~~ri  154 (160)
T PF13579_consen   81 SPT-AGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRRYG-VPPDRI  154 (160)
T ss_dssp             HHH-HHHHHHHHHHHHT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHHH----GGGE
T ss_pred             ccc-hhHHHHHHHHccCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHHhC-CCCCcE
Confidence            953 3444455555789999999998542211    2334444567789999999999999999999999955 578999


Q ss_pred             EEeecC
Q 009759          292 RIWKKG  297 (526)
Q Consensus       292 ~vi~ng  297 (526)
                      .+||||
T Consensus       155 ~vipnG  160 (160)
T PF13579_consen  155 HVIPNG  160 (160)
T ss_dssp             EE----
T ss_pred             EEeCcC
Confidence            999997

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=99.57  E-value=3e-13  Score=135.50  Aligned_cols=294  Identities=15%  Similarity=0.136  Sum_probs=169.1

Q ss_pred             CEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcc------------cccccccc-----cccchHHHHHHHHhhcCcE
Q 009759          206 DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV------------YIPRYTFS-----WLVKPMWLVIKFLHRAADL  268 (526)
Q Consensus       206 DiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------------~~~~~~~~-----~~~~~~~~~~~~~~~~ad~  268 (526)
                      =+.|+|.|.......++..+...+..|++.|.....            ++..+...     ........+++.+.+.||+
T Consensus       145 ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~Adv  224 (633)
T PF05693_consen  145 VIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADV  224 (633)
T ss_dssp             EEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSE
T ss_pred             EEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCe
Confidence            355777764433333444445577789999973221            11111100     1111234788899999999


Q ss_pred             EEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHH----HHHhh------------cCCCCCCcEEEEEecc
Q 009759          269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE----MRWRL------------SNGEPDKPLIVHVGRL  332 (526)
Q Consensus       269 ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~----~~~~~------------~~~~~~~~~i~~vG~l  332 (526)
                      +.++|+-.+.+.....+.  ..=.|+|||++.+.+.....-+.    .+.++            ....++...|...||.
T Consensus       225 FTTVSeITa~Ea~~LL~r--~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRY  302 (633)
T PF05693_consen  225 FTTVSEITAKEAEHLLKR--KPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRY  302 (633)
T ss_dssp             EEESSHHHHHHHHHHHSS----SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS
T ss_pred             eeehhhhHHHHHHHHhCC--CCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeece
Confidence            999999999998876642  22267899999987765432111    11111            1112345567778898


Q ss_pred             -cccccHHHHHHHHHhCC--------C---cEEEEEeCCc----------------------------------------
Q 009759          333 -GVEKSLDFLKRVMDRLP--------E---ARIAFIGDGP----------------------------------------  360 (526)
Q Consensus       333 -~~~Kg~~~li~a~~~l~--------~---~~l~ivG~g~----------------------------------------  360 (526)
                       -..||+|.+++|+.+|.        +   +-|+++-...                                        
T Consensus       303 Ef~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~  382 (633)
T PF05693_consen  303 EFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGR  382 (633)
T ss_dssp             -TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             eeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence             46799999999998771        2   2234432100                                        


Q ss_pred             --c------HH---HHHHHhcC------------------------------C------C--eEEec-ccCh------hh
Q 009759          361 --Y------RE---ELEKMFTG------------------------------M------P--AVFTG-MLLG------EE  384 (526)
Q Consensus       361 --~------~~---~l~~l~~~------------------------------~------~--V~~~g-~v~~------~~  384 (526)
                        .      .+   .++..+-.                              +      +  |.|++ +++.      -+
T Consensus       383 ~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~  462 (633)
T PF05693_consen  383 LPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLD  462 (633)
T ss_dssp             S-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-
T ss_pred             CCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCC
Confidence              0      00   00100000                              0      1  34433 2222      36


Q ss_pred             HHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccC--CCceeEee-CC--CCH----HHHHHHHH
Q 009759          385 LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ--DGKIGYLF-NP--GDL----DDCLSKLE  455 (526)
Q Consensus       385 l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~--~~~~g~~~-~~--~d~----~~la~ai~  455 (526)
                      ..+++..||+.|+||.+|++|.+.+|+.++|+|.|+|+..|....+.+..  ....|+.+ +.  .+.    +++++.|.
T Consensus       463 Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~  542 (633)
T PF05693_consen  463 YYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLY  542 (633)
T ss_dssp             HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHH
T ss_pred             HHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999998877664321  12345544 32  234    45555555


Q ss_pred             Hhhh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHh
Q 009759          456 PLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRKK  502 (526)
Q Consensus       456 ~ll~-d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~~~~~~  502 (526)
                      ++.. +...+..++.++.+..+..+|++....|. +-|+.++.+...+
T Consensus       543 ~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~-~Ay~~AL~~a~p~  589 (633)
T PF05693_consen  543 KFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYE-KAYDLALRRAYPD  589 (633)
T ss_dssp             HHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHH-HHHHHHHHHHSHH
T ss_pred             HHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHhcCcc
Confidence            5555 56677777777877778999999999997 7899888876544

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.56  E-value=1.1e-13  Score=140.14  Aligned_cols=275  Identities=18%  Similarity=0.229  Sum_probs=169.7

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  283 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~  283 (526)
                      .-|+|++|+++.+.++.++..+..+.++.+..|..+|...--....    ....+.+ .+-.||.|-+.+...++.+...
T Consensus       141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP----~r~eiL~-glL~aDlIgFqt~~~~~nFl~~  215 (474)
T PF00982_consen  141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLP----WREEILR-GLLGADLIGFQTFEYARNFLSC  215 (474)
T ss_dssp             TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HHHHTTST----THHHHHH-HHTTSSEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHHHHhhCC----cHHHHHH-HhhcCCEEEEecHHHHHHHHHH
Confidence            5599999999999898888888889999999999887532222111    1122333 3446999999999888877532


Q ss_pred             ----ccc-------------CCCcEEEeecCCCCCCCCCCcc-------cHHHHHhhcCCCCCCcEEEEEecccccccHH
Q 009759          284 ----RVT-------------AANKIRIWKKGVDSESFHPRFR-------SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLD  339 (526)
Q Consensus       284 ----~~~-------------~~~ki~vi~ngid~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~  339 (526)
                          .+.             ..-++.+.|-|||++.+.....       ...++.++   ..+..+|+-+.|++..||+.
T Consensus       216 ~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~---~~~~~ii~gvDrld~~kGi~  292 (474)
T PF00982_consen  216 CKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKF---KGKRKIIVGVDRLDYTKGIP  292 (474)
T ss_dssp             HHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHT---TT-SEEEEEE--B-GGG-HH
T ss_pred             HHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhc---CCCcEEEEEeccchhhcCHH
Confidence                110             0123667888998876632111       12233322   22358899999999999999


Q ss_pred             HHHHHHHhC----C----CcEEEEEeC-----Cc----cHHHHHHHhcCC----------CeE-EecccChhhHHHHHHc
Q 009759          340 FLKRVMDRL----P----EARIAFIGD-----GP----YREELEKMFTGM----------PAV-FTGMLLGEELSQAYAS  391 (526)
Q Consensus       340 ~li~a~~~l----~----~~~l~ivG~-----g~----~~~~l~~l~~~~----------~V~-~~g~v~~~~l~~~~~~  391 (526)
                      .=+.|++++    |    ++.|+-++.     .+    ..+++++++.+.          .|. +.+.++.+++..+|+.
T Consensus       293 ~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~  372 (474)
T PF00982_consen  293 EKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRA  372 (474)
T ss_dssp             HHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHh
Confidence            988888766    3    466766662     11    234444444322          244 4556899999999999


Q ss_pred             CcEEEecCCCCCCcHHHHHHHHcCCc----EEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHH
Q 009759          392 GDVFVMPSESETLGLVVLEAMSSGIP----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRET  466 (526)
Q Consensus       392 aDv~v~ps~~e~~~~~ilEAma~G~P----vI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~  466 (526)
                      ||+++.++..+|+.++..|+.+|...    +|.|...|..+.+     +...++++|.|.+++|++|.++++ .+++++.
T Consensus       373 aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L-----~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~  447 (474)
T PF00982_consen  373 ADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL-----SEAALLVNPWDIEEVADAIHEALTMPPEERKE  447 (474)
T ss_dssp             -SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT------TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHH
T ss_pred             hhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHc-----CCccEEECCCChHHHHHHHHHHHcCCHHHHHH
Confidence            99999999999999999999999765    6778887888777     223489999999999999999999 5667777


Q ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHH
Q 009759          467 MGQAARQEMEKYDWRAATRTIRNEQ  491 (526)
Q Consensus       467 ~~~~a~~~~~~fs~~~~~~~~~~~l  491 (526)
                      ..+..++.+..++....++.+++++
T Consensus       448 r~~~~~~~v~~~~~~~W~~~~l~~L  472 (474)
T PF00982_consen  448 RHARLREYVREHDVQWWAESFLRDL  472 (474)
T ss_dssp             HHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred             HHHHHHHHhHhCCHHHHHHHHHHHh
Confidence            7778888889999999999998655

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>TIGR03492 conserved hypothetical protein

Probab=99.56  E-value=3.7e-12  Score=127.84  Aligned_cols=323  Identities=15%  Similarity=0.088  Sum_probs=195.5

Q ss_pred             chHHHHHHHHHHHHH--CCCeEE---EEEeCCCCCccccCceec-cccccCCCccccc---------cc-hhcccHHHHH
Q 009759          135 GYKNRFQNFIKYLRE--MGDEVM---VVTTHEGVPQEFYGAKLI-GSRSFPCPWYQKV---------PL-SLALSPRIIS  198 (526)
Q Consensus       135 G~~~~~~~l~~~L~~--~G~~V~---vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~-~~~~~~~l~~  198 (526)
                      |-......++++|.+  .|++|.   ++....+.....  +... ....++...+.+.         .. .......-++
T Consensus         8 ged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~--ip~~g~~~~~~sgg~~~~~~~~~~~~~~~gl~~~~~~~~~   85 (396)
T TIGR03492         8 GEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQNLG--IPIIGPTKELPSGGFSYQSLRGLLRDLRAGLVGLTLGQWR   85 (396)
T ss_pred             hHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhhCC--CceeCCCCCCCCCCccCCCHHHHHHHHHhhHHHHHHHHHH
Confidence            344557899999998  599999   777665543221  1111 2222222222111         01 1223345566


Q ss_pred             HHHhc--CCCEEEECCCchHHHHHHHHHHhcCCCEEE---EEecCCcccccccc--------cccccchHHHHHHHHhhc
Q 009759          199 EVARF--KPDIIHASSPGIMVFGALIIAKLLCVPIVM---SYHTHVPVYIPRYT--------FSWLVKPMWLVIKFLHRA  265 (526)
Q Consensus       199 ~l~~~--~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~---~~h~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~  265 (526)
                      .++++  +||+|++.+...    .+++++..++|+++   ...+..-.......        .......+ -..+...+.
T Consensus        86 ~~~~~~~~p~~v~~~Gg~v----~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~-e~n~l~~~~  160 (396)
T TIGR03492        86 ALRKWAKKGDLIVAVGDIV----PLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPW-ERWLMRSRR  160 (396)
T ss_pred             HHHHHhhcCCEEEEECcHH----HHHHHHHcCCCceEEEeeccceeecCCCCCccchhhhccCCCccCHH-HHHHhhchh
Confidence            77888  999999987533    56677888999877   33332200000000        00001111 124556688


Q ss_pred             CcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEE-EEEecc--cccccHHHHH
Q 009759          266 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLI-VHVGRL--GVEKSLDFLK  342 (526)
Q Consensus       266 ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~vG~l--~~~Kg~~~li  342 (526)
                      |+.+++..+...+.+.+.+    .++.++.|.+-....... ..       ++ .++.+++ ++-|+-  ...+++..++
T Consensus       161 a~~v~~~~~~t~~~l~~~g----~k~~~vGnPv~d~l~~~~-~~-------~l-~~~~~~lllLpGSR~ae~~~~lp~~l  227 (396)
T TIGR03492       161 CLAVFVRDRLTARDLRRQG----VRASYLGNPMMDGLEPPE-RK-------PL-LTGRFRIALLPGSRPPEAYRNLKLLL  227 (396)
T ss_pred             hCEEeCCCHHHHHHHHHCC----CeEEEeCcCHHhcCcccc-cc-------cc-CCCCCEEEEECCCCHHHHHccHHHHH
Confidence            9999999999999888754    388889988754433211 10       11 2333444 555544  2345678899


Q ss_pred             HHHHhC---CCcEEEEEe-CCccHHHHHHHhcCCC------------------eEEecccChhhHHHHHHcCcEEEecCC
Q 009759          343 RVMDRL---PEARIAFIG-DGPYREELEKMFTGMP------------------AVFTGMLLGEELSQAYASGDVFVMPSE  400 (526)
Q Consensus       343 ~a~~~l---~~~~l~ivG-~g~~~~~l~~l~~~~~------------------V~~~g~v~~~~l~~~~~~aDv~v~ps~  400 (526)
                      ++++.+   +++++++.- .+...+.+++...+.+                  +.+..+.  +++..+|+.||++|..| 
T Consensus       228 ~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~ADlvI~rS-  304 (396)
T TIGR03492       228 RALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGR--GAFAEILHWADLGIAMA-  304 (396)
T ss_pred             HHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEech--HhHHHHHHhCCEEEECc-
Confidence            998887   577776643 3444555655444221                  4555554  68999999999999775 


Q ss_pred             CCCCcHHHHHHHHcCCcEEEeCCCCCC---ceecccCCC----ceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHH
Q 009759          401 SETLGLVVLEAMSSGIPVVGVRAGGIP---DIIPEDQDG----KIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ  473 (526)
Q Consensus       401 ~e~~~~~ilEAma~G~PvI~~~~gg~~---e~v~~~~~~----~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~  473 (526)
                          |.+..|++++|+|+|.....+..   .+.   +..    ..+..+...+++.+++++.++++|++.++++.+++++
T Consensus       305 ----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~---~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~~~~~~~~~~~~~  377 (396)
T TIGR03492       305 ----GTATEQAVGLGKPVIQLPGKGPQFTYGFA---EAQSRLLGGSVFLASKNPEQAAQVVRQLLADPELLERCRRNGQE  377 (396)
T ss_pred             ----CHHHHHHHHhCCCEEEEeCCCCHHHHHHH---HhhHhhcCCEEecCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence                46669999999999998754332   112   110    2344445567899999999999999988888755554


Q ss_pred             HH-HhCCHHHHHHHH
Q 009759          474 EM-EKYDWRAATRTI  487 (526)
Q Consensus       474 ~~-~~fs~~~~~~~~  487 (526)
                      .+ +....+.+++.+
T Consensus       378 ~lg~~~a~~~ia~~i  392 (396)
T TIGR03492       378 RMGPPGASARIAESI  392 (396)
T ss_pred             hcCCCCHHHHHHHHH
Confidence            44 345555555444

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=99.56  E-value=8e-13  Score=129.94  Aligned_cols=294  Identities=15%  Similarity=0.103  Sum_probs=168.0

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCcccc-c------c----
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQK-V------P----  187 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~----  187 (526)
                      |||++.++.    .+-|+-.+...++++|  +||+|++++.+....-.........+..+....... .      .    
T Consensus         1 MkIl~~v~~----~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (318)
T PF13528_consen    1 MKILFYVQG----HGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKPRFPVREIPGLGPIQENGRLDRWKTVRNNIR   74 (318)
T ss_pred             CEEEEEeCC----CCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhccccCEEEccCceEeccCCccchHHHHHHHHH
Confidence            899999874    3578999999999999  489999999875421100011111111111111000 0      0    


Q ss_pred             ---chhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHH--
Q 009759          188 ---LSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFL--  262 (526)
Q Consensus       188 ---~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~--  262 (526)
                         ........+.+++++++||+|++.....    ...+++..++|++...|..+..... ............+.+..  
T Consensus        75 ~~~~~~~~~~~~~~~l~~~~pDlVIsD~~~~----~~~aa~~~giP~i~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  149 (318)
T PF13528_consen   75 WLARLARRIRREIRWLREFRPDLVISDFYPL----AALAARRAGIPVIVISNQYWFLHPN-FWLPWDQDFGRLIERYIDR  149 (318)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCCEEEEcChHH----HHHHHHhcCCCEEEEEehHHccccc-CCcchhhhHHHHHHHhhhh
Confidence               0112334556778889999999986433    3456788999999877765432111 11111111111111111  


Q ss_pred             --hhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHH
Q 009759          263 --HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDF  340 (526)
Q Consensus       263 --~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~  340 (526)
                        +..++..+..+.... .      ....++.+++..+........            ..+.+.+++++|..+..    .
T Consensus       150 ~~~~~~~~~l~~~~~~~-~------~~~~~~~~~~p~~~~~~~~~~------------~~~~~~iLv~~gg~~~~----~  206 (318)
T PF13528_consen  150 YHFPPADRRLALSFYPP-L------PPFFRVPFVGPIIRPEIRELP------------PEDEPKILVYFGGGGPG----D  206 (318)
T ss_pred             ccCCcccceecCCcccc-c------cccccccccCchhcccccccC------------CCCCCEEEEEeCCCcHH----H
Confidence              233333333332200 0      001122222222222111111            12456688999987666    7


Q ss_pred             HHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEE
Q 009759          341 LKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  420 (526)
Q Consensus       341 li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~  420 (526)
                      ++++++.+++.+++++|.+...      ....||++.++.. +++.++|+.||++|.-    +.-+++.|++++|+|+|+
T Consensus       207 ~~~~l~~~~~~~~~v~g~~~~~------~~~~ni~~~~~~~-~~~~~~m~~ad~vIs~----~G~~t~~Ea~~~g~P~l~  275 (318)
T PF13528_consen  207 LIEALKALPDYQFIVFGPNAAD------PRPGNIHVRPFST-PDFAELMAAADLVISK----GGYTTISEALALGKPALV  275 (318)
T ss_pred             HHHHHHhCCCCeEEEEcCCccc------ccCCCEEEeecCh-HHHHHHHHhCCEEEEC----CCHHHHHHHHHcCCCEEE
Confidence            7889999999999999865211      1145899888753 6899999999999933    334569999999999999


Q ss_pred             eCCCCCCcee---cccCCCceeEeeC--CCCHHHHHHHHHHh
Q 009759          421 VRAGGIPDII---PEDQDGKIGYLFN--PGDLDDCLSKLEPL  457 (526)
Q Consensus       421 ~~~gg~~e~v---~~~~~~~~g~~~~--~~d~~~la~ai~~l  457 (526)
                      -...+..|..   ...++.+.|..++  .-+++.|+++|+++
T Consensus       276 ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~  317 (318)
T PF13528_consen  276 IPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL  317 (318)
T ss_pred             EeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence            8876543321   0003344555544  34688888888764

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=99.56  E-value=3.7e-13  Score=134.40  Aligned_cols=277  Identities=16%  Similarity=0.100  Sum_probs=197.9

Q ss_pred             CCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhc
Q 009759          205 PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR  284 (526)
Q Consensus       205 pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~  284 (526)
                      -|+|++|+++.+.++.++..+....++-+..|..+|...--....+-    ..+.+ .+-.+|.|-+.+...++.+.+.-
T Consensus       124 ~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~r----~eil~-glL~aDlIGFqt~~y~rnFl~~~  198 (474)
T PRK10117        124 DDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPH----DELLE-QLCDYDLLGFQTENDRLAFLDCL  198 (474)
T ss_pred             CCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCCh----HHHHH-HHHhCccceeCCHHHHHHHHHHH
Confidence            48999999999888888877777889999999988754322211211    12233 34468999999988887765411


Q ss_pred             ----cc------------CCCcEEEeecCCCCCCCCCCccc--HHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHH
Q 009759          285 ----VT------------AANKIRIWKKGVDSESFHPRFRS--SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD  346 (526)
Q Consensus       285 ----~~------------~~~ki~vi~ngid~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~  346 (526)
                          +.            ..-++.+.|-|||++.|......  ......+.....++.+|+-+.|++.-||+..=++|++
T Consensus       199 ~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe  278 (474)
T PRK10117        199 SNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYE  278 (474)
T ss_pred             HHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHH
Confidence                10            11246678899998876432111  1111111111235778999999999999999888887


Q ss_pred             hC----C----CcEEEEEeCC-----c----cHHHHHHHhcCC----------CeEE-ecccChhhHHHHHHcCcEEEec
Q 009759          347 RL----P----EARIAFIGDG-----P----YREELEKMFTGM----------PAVF-TGMLLGEELSQAYASGDVFVMP  398 (526)
Q Consensus       347 ~l----~----~~~l~ivG~g-----~----~~~~l~~l~~~~----------~V~~-~g~v~~~~l~~~~~~aDv~v~p  398 (526)
                      .+    |    ++.|+-+...     +    ...++++++.+.          .|.+ ...++.+++..+|+.|||++++
T Consensus       279 ~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVT  358 (474)
T PRK10117        279 ALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVT  358 (474)
T ss_pred             HHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEec
Confidence            75    3    4666666521     1    233444444322          1444 4567889999999999999999


Q ss_pred             CCCCCCcHHHHHHHHcCC-----cEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHHHHHHHH
Q 009759          399 SESETLGLVVLEAMSSGI-----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAAR  472 (526)
Q Consensus       399 s~~e~~~~~ilEAma~G~-----PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~~~a~  472 (526)
                      +..+|+.++..|+.||..     .+|.|...|..+.+   .   ..++++|.|.++++++|.+.+. ..+++++..+..+
T Consensus       359 plRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L---~---~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~  432 (474)
T PRK10117        359 PLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---T---SALIVNPYDRDEVAAALDRALTMPLAERISRHAEML  432 (474)
T ss_pred             ccccccccccchheeeecCCCCccEEEecccchHHHh---C---CCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence            999999999999999975     37888888888877   2   3789999999999999999999 5667777777788


Q ss_pred             HHHHhCCHHHHHHHHHHHHH
Q 009759          473 QEMEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       473 ~~~~~fs~~~~~~~~~~~ly  492 (526)
                      +.+..++....++.+++++-
T Consensus       433 ~~v~~~dv~~W~~~fL~~L~  452 (474)
T PRK10117        433 DVIVKNDINHWQECFISDLK  452 (474)
T ss_pred             HHhhhCCHHHHHHHHHHHHH
Confidence            88899999999999985554

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=99.55  E-value=4.8e-12  Score=125.79  Aligned_cols=336  Identities=14%  Similarity=0.112  Sum_probs=205.5

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCCCccc----cCceeccc---cccCCCccc--c---
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGVPQEF----YGAKLIGS---RSFPCPWYQ--K---  185 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~----~~~~~~~~---~~~~~~~~~--~---  185 (526)
                      |||++|+..-|-      -..+..++++|++. ++++.++.++......+    ......++   ..+......  .   
T Consensus         1 ~ki~~v~GtRpe------~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (365)
T TIGR03568         1 KKICVVTGTRAD------YGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEKDGFDIDEKIEILLDSDSNAGM   74 (365)
T ss_pred             CeEEEEEecChh------HHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHHHcCCCCCCccccccCCCCCCCH
Confidence            689999765441      24578899999884 78998888764432211    11110111   111111111  0   


Q ss_pred             ccchhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhc
Q 009759          186 VPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRA  265 (526)
Q Consensus       186 ~~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (526)
                      ..........+.+++.+++||+|++++.....+++.+.+...++|++. +|+....+.      .   .-....+.+-+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~~------~---~eE~~r~~i~~l  144 (365)
T TIGR03568        75 AKSMGLTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTEG------A---IDESIRHAITKL  144 (365)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCCC------C---chHHHHHHHHHH
Confidence            111123456788889999999999999877788888899999999883 444321110      0   011223445567


Q ss_pred             CcEEEeCChhHHHHHHHhcccCCCcEEEeecC-CCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEec-----ccccccHH
Q 009759          266 ADLTLVPSVAIGKDLEAARVTAANKIRIWKKG-VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR-----LGVEKSLD  339 (526)
Q Consensus       266 ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ng-id~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~-----l~~~Kg~~  339 (526)
                      ++..++.++..++.+.+.+. +.+++.++.|. +|.-.............++++...++.+++.+-+     ....+.+.
T Consensus       145 a~l~f~~t~~~~~~L~~eg~-~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~  223 (365)
T TIGR03568       145 SHLHFVATEEYRQRVIQMGE-DPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIK  223 (365)
T ss_pred             HhhccCCCHHHHHHHHHcCC-CCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHH
Confidence            78999999999999988775 56788887764 4432222112334555555542223443343333     22334577


Q ss_pred             HHHHHHHhCC-CcEEEEEeCCc----cHHHHHHHhc-CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHH
Q 009759          340 FLKRVMDRLP-EARIAFIGDGP----YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  413 (526)
Q Consensus       340 ~li~a~~~l~-~~~l~ivG~g~----~~~~l~~l~~-~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma  413 (526)
                      .+++++..+. ++.++.-..++    ..+.++++.. ..++.+.+.++..++..+++.||++|--|    .| .+.||.+
T Consensus       224 ~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdS----Sg-gi~EA~~  298 (365)
T TIGR03568       224 ELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNS----SS-GIIEAPS  298 (365)
T ss_pred             HHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcC----hh-HHHhhhh
Confidence            7777777663 34232211222    2344555543 34799999999999999999999999333    23 3489999


Q ss_pred             cCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Q 009759          414 SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIR  488 (526)
Q Consensus       414 ~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~  488 (526)
                      +|+|+|+  .+.-++.+   +.+.+++.+ ..|++++.+++.++ .++..++.+     ... ..|...+.++++.
T Consensus       299 lg~Pvv~--l~~R~e~~---~~g~nvl~v-g~~~~~I~~a~~~~-~~~~~~~~~-----~~~~~pygdg~as~rI~  362 (365)
T TIGR03568       299 FGVPTIN--IGTRQKGR---LRADSVIDV-DPDKEEIVKAIEKL-LDPAFKKSL-----KNVKNPYGDGNSSERII  362 (365)
T ss_pred             cCCCEEe--ecCCchhh---hhcCeEEEe-CCCHHHHHHHHHHH-hChHHHHHH-----hhCCCCCCCChHHHHHH
Confidence            9999995  45677777   667787767 44899999999995 454433332     111 2466666666665

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=99.52  E-value=3.4e-12  Score=128.25  Aligned_cols=193  Identities=12%  Similarity=0.168  Sum_probs=142.9

Q ss_pred             hcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHH
Q 009759          264 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR  343 (526)
Q Consensus       264 ~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~  343 (526)
                      .+.|.||+.++...+.+...+. +..++.++|-|+-.. + +.            .......++.++   +.--++.+.+
T Consensus       238 ~~~~~iIv~T~~q~~di~~r~~-~~~~~~~ip~g~i~~-~-~~------------~~r~~~~~l~~t---~s~~I~~i~~  299 (438)
T TIGR02919       238 TRNKKIIIPNKNEYEKIKELLD-NEYQEQISQLGYLYP-F-KK------------DNKYRKQALILT---NSDQIEHLEE  299 (438)
T ss_pred             cccCeEEeCCHHHHHHHHHHhC-cccCceEEEEEEEEe-e-cc------------ccCCcccEEEEC---CHHHHHHHHH
Confidence            6789999999888888887775 356778888777522 1 11            122344567776   2445666666


Q ss_pred             HHHhCCCcEEEEEeCCcc-HHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeC
Q 009759          344 VMDRLPEARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       344 a~~~l~~~~l~ivG~g~~-~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~  422 (526)
                      +++++|+++|+| |.+.. ...+.++.+-.||.....+...++.++|..||+++..+..|++++.+.||+.+|+|||+.+
T Consensus       300 Lv~~lPd~~f~I-ga~te~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd  378 (438)
T TIGR02919       300 IVQALPDYHFHI-AALTEMSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFE  378 (438)
T ss_pred             HHHhCCCcEEEE-EecCcccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEe
Confidence            777889999999 76544 6777777444466665555556899999999999999999999999999999999999998


Q ss_pred             CC-CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHH
Q 009759          423 AG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWR  481 (526)
Q Consensus       423 ~g-g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~  481 (526)
                      .. |..+++   .+   |.+++.+++++++++|.+++.|++.+++.-+.-++.+..-+.+
T Consensus       379 ~t~~~~~~i---~~---g~l~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~~~  432 (438)
T TIGR02919       379 ETAHNRDFI---AS---ENIFEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDISKE  432 (438)
T ss_pred             cccCCcccc---cC---CceecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCHH
Confidence            76 445666   33   8899999999999999999999977666544444443333333

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=99.49  E-value=9.1e-12  Score=123.81  Aligned_cols=279  Identities=17%  Similarity=0.171  Sum_probs=198.7

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  283 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~  283 (526)
                      .-|+|++|+++.+.++.++..+....++.+..|..+|...--....     .+.-....+-.||.|-+.++..++.+...
T Consensus       147 ~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP-----~r~eIl~gll~~dligFqt~~y~~nF~~~  221 (486)
T COG0380         147 PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFRCLP-----WREEILEGLLGADLIGFQTESYARNFLDL  221 (486)
T ss_pred             CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHHHhhCc-----hHHHHHHHhhcCCeeEecCHHHHHHHHHH
Confidence            3499999999999888888888888899999999887532111111     11222234456999999998888766532


Q ss_pred             cc-----------------cCCCcEEEeecCCCCCCCCCCccc----HHHHHhhcCCCCCCcEEEEEecccccccHHHHH
Q 009759          284 RV-----------------TAANKIRIWKKGVDSESFHPRFRS----SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLK  342 (526)
Q Consensus       284 ~~-----------------~~~~ki~vi~ngid~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li  342 (526)
                      -.                 ....++..+|-|||+..+......    ...++-......++.+|+.+.|++.-||+..=+
T Consensus       222 ~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl  301 (486)
T COG0380         222 CSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRL  301 (486)
T ss_pred             HHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHH
Confidence            10                 012456778999998877443211    112221111133478899999999999998888


Q ss_pred             HHHHhC----C----CcEEEEEeCCc---------cHHHHHHHhcCC----------CeE-EecccChhhHHHHHHcCcE
Q 009759          343 RVMDRL----P----EARIAFIGDGP---------YREELEKMFTGM----------PAV-FTGMLLGEELSQAYASGDV  394 (526)
Q Consensus       343 ~a~~~l----~----~~~l~ivG~g~---------~~~~l~~l~~~~----------~V~-~~g~v~~~~l~~~~~~aDv  394 (526)
                      .|++++    |    ++.++-++...         ...+++.++.+.          .|. +.-.++.+++..+|..||+
T Consensus       302 ~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv  381 (486)
T COG0380         302 LAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADV  381 (486)
T ss_pred             HHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhce
Confidence            888776    3    46666666321         222333333321          244 4556888999999999999


Q ss_pred             EEecCCCCCCcHHHHHHHHcC----CcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHHHHH
Q 009759          395 FVMPSESETLGLVVLEAMSSG----IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQ  469 (526)
Q Consensus       395 ~v~ps~~e~~~~~ilEAma~G----~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~~  469 (526)
                      +++.+..+|+.++..|+.+|-    -+.|-+...|....+   .   ..+++++.|.++++++|.+.++ .++++++.-+
T Consensus       382 ~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L---~---~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~  455 (486)
T COG0380         382 MLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL---R---DALIVNPWDTKEVADAIKRALTMSLEERKERHE  455 (486)
T ss_pred             eeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh---c---cCEeECCCChHHHHHHHHHHhcCCHHHHHHHHH
Confidence            999999999999999999984    467777777766666   2   2789999999999999999999 6677777777


Q ss_pred             HHHHHHHhCCHHHHHHHHHHHHHH
Q 009759          470 AARQEMEKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       470 ~a~~~~~~fs~~~~~~~~~~~ly~  493 (526)
                      ..++.+.+++....++.+++++.+
T Consensus       456 ~~~~~v~~~d~~~W~~~fl~~la~  479 (486)
T COG0380         456 KLLKQVLTHDVARWANSFLDDLAQ  479 (486)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHh
Confidence            788888899999999998876655

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.49  E-value=4.9e-12  Score=136.69  Aligned_cols=276  Identities=14%  Similarity=0.145  Sum_probs=197.7

Q ss_pred             CEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh--
Q 009759          206 DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA--  283 (526)
Q Consensus       206 DiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~--  283 (526)
                      |+|++|+++.+.++.++..+....++-+..|..+|...--....     .+.-....+-.||.|-+.+...++.+.+.  
T Consensus       203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP-----~r~eiL~glL~aDlIGFht~~yar~Fl~~~~  277 (854)
T PLN02205        203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLP-----IREELLRALLNSDLIGFHTFDYARHFLSCCS  277 (854)
T ss_pred             CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHhhCC-----cHHHHHHHHhcCCeEEecCHHHHHHHHHHHH
Confidence            89999999999888888777888999999999888643222211     11222334456999999999888877651  


Q ss_pred             --ccc---------------CCCcEEEeecCCCCCCCCCCccc-------HHHHHhhcCCCCCCcEEEEEecccccccHH
Q 009759          284 --RVT---------------AANKIRIWKKGVDSESFHPRFRS-------SEMRWRLSNGEPDKPLIVHVGRLGVEKSLD  339 (526)
Q Consensus       284 --~~~---------------~~~ki~vi~ngid~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~  339 (526)
                        .+.               ..-++.+.|-|||.+.+......       .+++.++  ...++.+|+-+.|++..||+.
T Consensus       278 r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~ilgVDrlD~~KGi~  355 (854)
T PLN02205        278 RMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQF--CDQDRIMLLGVDDMDIFKGIS  355 (854)
T ss_pred             HHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHh--ccCCCEEEEEccCcccccCHH
Confidence              110               11236678899998876432221       1223222  123578899999999999999


Q ss_pred             HHHHHHHhC----C----CcEEEEEeC-----CccH----HHHHHHhcCC----------CeEEe-cccChhhHHHHHHc
Q 009759          340 FLKRVMDRL----P----EARIAFIGD-----GPYR----EELEKMFTGM----------PAVFT-GMLLGEELSQAYAS  391 (526)
Q Consensus       340 ~li~a~~~l----~----~~~l~ivG~-----g~~~----~~l~~l~~~~----------~V~~~-g~v~~~~l~~~~~~  391 (526)
                      .=+.|++++    |    ++.|+-+..     ++..    .++.+++.+.          .|+++ ..++.+++..+|+.
T Consensus       356 ~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~  435 (854)
T PLN02205        356 LKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVV  435 (854)
T ss_pred             HHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHh
Confidence            988888776    4    355665552     2222    2333333321          25554 66889999999999


Q ss_pred             CcEEEecCCCCCCcHHHHHHHHcCC-------------------cEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHH
Q 009759          392 GDVFVMPSESETLGLVVLEAMSSGI-------------------PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLS  452 (526)
Q Consensus       392 aDv~v~ps~~e~~~~~ilEAma~G~-------------------PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~  452 (526)
                      |||+++.+..+|+.++..|+.+|..                   .+|.|...|....+   .   ..++++|.|.+++|+
T Consensus       436 ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L---~---~Ai~VNP~d~~~~a~  509 (854)
T PLN02205        436 AECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL---S---GAIRVNPWNIDAVAD  509 (854)
T ss_pred             ccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHh---C---cCeEECCCCHHHHHH
Confidence            9999999999999999999999854                   36677776666666   2   378999999999999


Q ss_pred             HHHHhhh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 009759          453 KLEPLLY-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       453 ai~~ll~-d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~  494 (526)
                      +|.+.+. .+++++...+..++++..++....++.+++++.+.
T Consensus       510 ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~  552 (854)
T PLN02205        510 AMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT  552 (854)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence            9999999 45566666667788888999999999999777554

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=99.47  E-value=9.7e-12  Score=118.90  Aligned_cols=265  Identities=15%  Similarity=0.097  Sum_probs=158.0

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      ||+|.++..+ ....|+-.++..||++|+++|++|.+++......- ...+...+...+.++....   ...-...+.+.
T Consensus         1 ~i~ir~Da~~-~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~-~~~i~~~g~~v~~~~~~~~---~~~d~~~~~~~   75 (279)
T TIGR03590         1 KILFRADASS-EIGLGHVMRCLTLARALHAQGAEVAFACKPLPGDL-IDLLLSAGFPVYELPDESS---RYDDALELINL   75 (279)
T ss_pred             CEEEEecCCc-cccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHH-HHHHHHcCCeEEEecCCCc---hhhhHHHHHHH
Confidence            6888888765 66678999999999999999999999997653220 0000111111111111000   01123357788


Q ss_pred             HHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHH
Q 009759          200 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD  279 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~  279 (526)
                      +++.+||+|++.++...... ....+..+. .++.+-|....                     -..+|.++..+.. .+.
T Consensus        76 l~~~~~d~vV~D~y~~~~~~-~~~~k~~~~-~l~~iDD~~~~---------------------~~~~D~vin~~~~-~~~  131 (279)
T TIGR03590        76 LEEEKFDILIVDHYGLDADW-EKLIKEFGR-KILVIDDLADR---------------------PHDCDLLLDQNLG-ADA  131 (279)
T ss_pred             HHhcCCCEEEEcCCCCCHHH-HHHHHHhCC-eEEEEecCCCC---------------------CcCCCEEEeCCCC-cCH
Confidence            88889999999876433221 112223344 44445553211                     0158988887765 332


Q ss_pred             HHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC-CCcEE-EEEe
Q 009759          280 LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-PEARI-AFIG  357 (526)
Q Consensus       280 l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l-~~~~l-~ivG  357 (526)
                      ..-....+.....+  .|.+.-...+.....  +.........+.+++++|..+..+....+++++..+ +++++ +++|
T Consensus       132 ~~y~~~~~~~~~~l--~G~~Y~~lr~eF~~~--~~~~~~~~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~~~~~i~vv~G  207 (279)
T TIGR03590       132 SDYQGLVPANCRLL--LGPSYALLREEFYQL--ATANKRRKPLRRVLVSFGGADPDNLTLKLLSALAESQINISITLVTG  207 (279)
T ss_pred             hHhcccCcCCCeEE--ecchHHhhhHHHHHh--hHhhhcccccCeEEEEeCCcCCcCHHHHHHHHHhccccCceEEEEEC
Confidence            22111123333333  354433222211110  000000012345788999888877778888888776 35554 3567


Q ss_pred             CC-ccHHHHHHHhcC-CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          358 DG-PYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       358 ~g-~~~~~l~~l~~~-~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      .+ +..+++++.... .++++++++  +++.++|+.||++|..     .|.++.|++++|+|+|+....
T Consensus       208 ~~~~~~~~l~~~~~~~~~i~~~~~~--~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P~i~i~~~  269 (279)
T TIGR03590       208 SSNPNLDELKKFAKEYPNIILFIDV--ENMAELMNEADLAIGA-----AGSTSWERCCLGLPSLAICLA  269 (279)
T ss_pred             CCCcCHHHHHHHHHhCCCEEEEeCH--HHHHHHHHHCCEEEEC-----CchHHHHHHHcCCCEEEEEec
Confidence            54 456677776654 379999998  7999999999999963     468999999999999987653

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=99.46  E-value=3.3e-13  Score=106.20  Aligned_cols=90  Identities=29%  Similarity=0.488  Sum_probs=84.4

Q ss_pred             EEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHH
Q 009759          394 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQ  473 (526)
Q Consensus       394 v~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~  473 (526)
                      +++.|+..++++.+++|+||||+|+|+.+.+++.+++   .++..++.++  |++++.++|..+++|++.++++++++++
T Consensus         1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~---~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~   75 (92)
T PF13524_consen    1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIF---EDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARE   75 (92)
T ss_pred             CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHc---CCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence            4677888899999999999999999999999999999   8888999888  9999999999999999999999999999


Q ss_pred             HHH-hCCHHHHHHHHH
Q 009759          474 EME-KYDWRAATRTIR  488 (526)
Q Consensus       474 ~~~-~fs~~~~~~~~~  488 (526)
                      .++ +|+|++.+++++
T Consensus        76 ~v~~~~t~~~~~~~il   91 (92)
T PF13524_consen   76 RVLKRHTWEHRAEQIL   91 (92)
T ss_pred             HHHHhCCHHHHHHHHH
Confidence            994 899999999886

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=99.44  E-value=2e-11  Score=124.10  Aligned_cols=151  Identities=17%  Similarity=0.094  Sum_probs=97.5

Q ss_pred             CCCcEEEEEecccc---cccHHHHHHHHHhCCCcEE-EEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEE
Q 009759          321 PDKPLIVHVGRLGV---EKSLDFLKRVMDRLPEARI-AFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV  396 (526)
Q Consensus       321 ~~~~~i~~vG~l~~---~Kg~~~li~a~~~l~~~~l-~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v  396 (526)
                      .++.+++..|+...   .+....++++++.+ +.++ +.+|......    .....||.+.++++.   ..+|..||++|
T Consensus       238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-~~~~i~~~g~~~~~~----~~~~~~v~~~~~~p~---~~ll~~~d~~I  309 (401)
T cd03784         238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-GQRAILSLGWGGLGA----EDLPDNVRVVDFVPH---DWLLPRCAAVV  309 (401)
T ss_pred             CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-CCeEEEEccCccccc----cCCCCceEEeCCCCH---HHHhhhhheee
Confidence            35566778888743   44567778888877 4554 4556433221    112348999999864   45688899999


Q ss_pred             ecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHHHHHH
Q 009759          397 MPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQA  470 (526)
Q Consensus       397 ~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~~~~~  470 (526)
                          ..|..+++.||+++|+|+|+....+-    .+.+   +..+.|..+...  +.+++.+++.++++++ .+++..+.
T Consensus       310 ----~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~---~~~G~g~~l~~~~~~~~~l~~al~~~l~~~-~~~~~~~~  381 (401)
T cd03784         310 ----HHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV---AELGAGPALDPRELTAERLAAALRRLLDPP-SRRRAAAL  381 (401)
T ss_pred             ----ecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH---HHCCCCCCCCcccCCHHHHHHHHHHHhCHH-HHHHHHHH
Confidence                44456899999999999999876542    2333   344567666544  7899999999999753 44444444


Q ss_pred             HHHHHHhCCHHHHHHHH
Q 009759          471 ARQEMEKYDWRAATRTI  487 (526)
Q Consensus       471 a~~~~~~fs~~~~~~~~  487 (526)
                      +++..+.-..+..++.+
T Consensus       382 ~~~~~~~~g~~~~~~~i  398 (401)
T cd03784         382 LRRIREEDGVPSAADVI  398 (401)
T ss_pred             HHHHHhccCHHHHHHHH
Confidence            44332334444444433

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=99.39  E-value=5.4e-10  Score=107.77  Aligned_cols=311  Identities=16%  Similarity=0.204  Sum_probs=197.8

Q ss_pred             chHHHHHHHHHHHHHC--CCeEEEEEeCCCCCc---cccCceeccccccCCCccccccchhcccHHHHHHHHhcCCCEEE
Q 009759          135 GYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQ---EFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIH  209 (526)
Q Consensus       135 G~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiV~  209 (526)
                      |-...+..|+++|++.  +..+.+-+..+...+   ...+..   +...+.|        +.....+.++++..+||+++
T Consensus        60 GEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~---v~h~YlP--------~D~~~~v~rFl~~~~P~l~I  128 (419)
T COG1519          60 GEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDS---VIHQYLP--------LDLPIAVRRFLRKWRPKLLI  128 (419)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCC---eEEEecC--------cCchHHHHHHHHhcCCCEEE
Confidence            5667889999999999  667776664432211   111111   1111222        23445788999999999988


Q ss_pred             ECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCC
Q 009759          210 ASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAAN  289 (526)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~  289 (526)
                      +.....+.. .+.-++..++|+++..--..     ..... ..+....+.+.+++..|.|++.|+..++.+.+.|..   
T Consensus       129 i~EtElWPn-li~e~~~~~~p~~LvNaRLS-----~rS~~-~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~~LGa~---  198 (419)
T COG1519         129 IMETELWPN-LINELKRRGIPLVLVNARLS-----DRSFA-RYAKLKFLARLLFKNIDLILAQSEEDAQRFRSLGAK---  198 (419)
T ss_pred             EEeccccHH-HHHHHHHcCCCEEEEeeeec-----hhhhH-HHHHHHHHHHHHHHhcceeeecCHHHHHHHHhcCCc---
Confidence            865433221 33456788999887432211     11111 112234677888999999999999999999999862   


Q ss_pred             cEEEeecCCCCCCCCCCccc---HHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHh----CCCcEEEEEeCCc-c
Q 009759          290 KIRIWKKGVDSESFHPRFRS---SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR----LPEARIAFIGDGP-Y  361 (526)
Q Consensus       290 ki~vi~ngid~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~----l~~~~l~ivG~g~-~  361 (526)
                      ++.+..| +..+.-.+....   ...+..+   ...+++++..++  +...-+.++++...    .|+..++++-.-+ -
T Consensus       199 ~v~v~GN-lKfd~~~~~~~~~~~~~~r~~l---~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpER  272 (419)
T COG1519         199 PVVVTGN-LKFDIEPPPQLAAELAALRRQL---GGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPER  272 (419)
T ss_pred             ceEEecc-eeecCCCChhhHHHHHHHHHhc---CCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChhh
Confidence            4666665 222211111111   1233333   222788888877  33334445566544    4788888887544 3


Q ss_pred             HHHHHHHhcCCC-----------------eEEecccChhhHHHHHHcCcEEEecC-CCCCCcHHHHHHHHcCCcEEEeCC
Q 009759          362 REELEKMFTGMP-----------------AVFTGMLLGEELSQAYASGDVFVMPS-ESETLGLVVLEAMSSGIPVVGVRA  423 (526)
Q Consensus       362 ~~~l~~l~~~~~-----------------V~~~g~v~~~~l~~~~~~aDv~v~ps-~~e~~~~~ilEAma~G~PvI~~~~  423 (526)
                      .+.++++++..+                 |.+...+  -|+..+|..+|+.++-- ...-.|-.++|+.++|+|||....
T Consensus       273 f~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dtm--GEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~  350 (419)
T COG1519         273 FKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTM--GELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPY  350 (419)
T ss_pred             HHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecH--hHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCc
Confidence            355666665443                 3333333  48999999999988764 445567789999999999998754


Q ss_pred             C-CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHH
Q 009759          424 G-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME  476 (526)
Q Consensus       424 g-g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~  476 (526)
                      - ...|+.......+.|+.++  |.+.+++++..++.|++.++++++++...++
T Consensus       351 ~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~  402 (419)
T COG1519         351 TFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA  402 (419)
T ss_pred             cccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence            2 3344332224556677777  6888999999998899999999999998884

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=99.38  E-value=1.1e-10  Score=112.79  Aligned_cols=295  Identities=18%  Similarity=0.236  Sum_probs=179.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc---cCceeccccccCCCccccccchhcccHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF---YGAKLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      |||.+-..+.      .......++++.|.++||+|.+.+.+.+...+.   .++....+.........+.........+
T Consensus         1 MkIwiDi~~p------~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~~R~~~   74 (335)
T PF04007_consen    1 MKIWIDITHP------AHVHFFKNIIRELEKRGHEVLITARDKDETEELLDLYGIDYIVIGKHGDSLYGKLLESIERQYK   74 (335)
T ss_pred             CeEEEECCCc------hHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCCeEEEcCCCCCHHHHHHHHHHHHHH
Confidence            8897776542      245778999999999999999999877543222   2332222222222223333333444567


Q ss_pred             HHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChh
Q 009759          196 IISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVA  275 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~  275 (526)
                      +.+++++++||++++.....    +...+...|+|.|....+.....               ..+..+..+|.++++.-.
T Consensus        75 l~~~~~~~~pDv~is~~s~~----a~~va~~lgiP~I~f~D~e~a~~---------------~~~Lt~Pla~~i~~P~~~  135 (335)
T PF04007_consen   75 LLKLIKKFKPDVAISFGSPE----AARVAFGLGIPSIVFNDTEHAIA---------------QNRLTLPLADVIITPEAI  135 (335)
T ss_pred             HHHHHHhhCCCEEEecCcHH----HHHHHHHhCCCeEEEecCchhhc---------------cceeehhcCCeeECCccc
Confidence            88888899999999876432    34467889999998776633211               133456789999998876


Q ss_pred             HHHHHHHhcccCCCcEEEeecCCCCCCC-CCCcccHHHHHhhcCCCCCCcEEEEEecc--cccc---c-HHHHHHHHHhC
Q 009759          276 IGKDLEAARVTAANKIRIWKKGVDSESF-HPRFRSSEMRWRLSNGEPDKPLIVHVGRL--GVEK---S-LDFLKRVMDRL  348 (526)
Q Consensus       276 ~~~~l~~~~~~~~~ki~vi~ngid~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~vG~l--~~~K---g-~~~li~a~~~l  348 (526)
                      -...+.+.+. . +++. -.+|++.-.+ ++-..+.....+++. .+++.+++=...+  ...+   + +..+++.+++.
T Consensus       136 ~~~~~~~~G~-~-~~i~-~y~G~~E~ayl~~F~Pd~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~  211 (335)
T PF04007_consen  136 PKEFLKRFGA-K-NQIR-TYNGYKELAYLHPFKPDPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKY  211 (335)
T ss_pred             CHHHHHhcCC-c-CCEE-EECCeeeEEeecCCCCChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhh
Confidence            6666666653 1 2332 2677765433 333344666777764 3344333311111  1111   1 34445555444


Q ss_pred             CCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC---C
Q 009759          349 PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG---G  425 (526)
Q Consensus       349 ~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g---g  425 (526)
                      .+. ++++.......+   +.++.++.+....  -+..+++..||++|     .+.|....||...|+|.|.+-.|   +
T Consensus       212 ~~~-vV~ipr~~~~~~---~~~~~~~~i~~~~--vd~~~Ll~~a~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~  280 (335)
T PF04007_consen  212 GRN-VVIIPRYEDQRE---LFEKYGVIIPPEP--VDGLDLLYYADLVI-----GGGGTMAREAALLGTPAISCFPGKLLA  280 (335)
T ss_pred             Cce-EEEecCCcchhh---HHhccCccccCCC--CCHHHHHHhcCEEE-----eCCcHHHHHHHHhCCCEEEecCCcchh
Confidence            334 666664433322   2334444443321  26668999999999     55578899999999999987544   3


Q ss_pred             CCceecccCCCceeEeeCCCCHHHHHHHHHHhh
Q 009759          426 IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  458 (526)
Q Consensus       426 ~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll  458 (526)
                      +.+++     -+.|+++...|++++.+.+....
T Consensus       281 vd~~L-----~~~Gll~~~~~~~ei~~~v~~~~  308 (335)
T PF04007_consen  281 VDKYL-----IEKGLLYHSTDPDEIVEYVRKNL  308 (335)
T ss_pred             HHHHH-----HHCCCeEecCCHHHHHHHHHHhh
Confidence            33444     24578888889999998665544

They are found in archaea and some bacteria and have no known function.

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=99.34  E-value=2.2e-10  Score=112.46  Aligned_cols=292  Identities=14%  Similarity=0.181  Sum_probs=154.8

Q ss_pred             EEEEEeccCCCCccC-chHHHHHHHHHHHHHCCCeEEEEEeCCCCCcccc---Cceec-cccccCCCccc-c--ccch--
Q 009759          120 RIALFVEPSPFSYVS-GYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFY---GAKLI-GSRSFPCPWYQ-K--VPLS--  189 (526)
Q Consensus       120 kIliv~~~~p~~~~g-G~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~---~~~~~-~~~~~~~~~~~-~--~~~~--  189 (526)
                      ||++...     ..| |+..+...++++|++ ||+|.+++....  ..+.   +.... ........... .  ....  
T Consensus         1 ril~~~~-----g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~   72 (321)
T TIGR00661         1 KILYSVC-----GEGFGHTTRSVAIGEALKN-DYEVSYIASGRS--KNYISKYGFKVFETFPGIKLKGEDGKVNIVKTLR   72 (321)
T ss_pred             CEEEEEe-----ccCccHHHHHHHHHHHHhC-CCeEEEEEcCCH--HHhhhhhcCcceeccCCceEeecCCcCcHHHHHH
Confidence            4666543     236 999999999999999 999999976541  1110   11100 00000000000 0  0000  


Q ss_pred             ------hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHh
Q 009759          190 ------LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLH  263 (526)
Q Consensus       190 ------~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (526)
                            ........+++++++||+|++.....    +.++++..++|++...|.....+ +.. ..............+.
T Consensus        73 ~~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~----~~~aA~~~~iP~i~i~~q~~~~~-~~~-~~~~~~~~~~~~~~~~  146 (321)
T TIGR00661        73 NKEYSPKKAIRREINIIREYNPDLIISDFEYS----TVVAAKLLKIPVICISNQNYTRY-PLK-TDLIVYPTMAALRIFN  146 (321)
T ss_pred             hhccccHHHHHHHHHHHHhcCCCEEEECCchH----HHHHHHhcCCCEEEEecchhhcC-Ccc-cchhHHHHHHHHHHhc
Confidence                  11333556788899999999986433    35578889999997666432111 110 0111111112222333


Q ss_pred             hcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCC-CCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHH
Q 009759          264 RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFH-PRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLK  342 (526)
Q Consensus       264 ~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li  342 (526)
                      ..++.++........     .+        .|..+.  ... +. ....... . ....+..++++.|.    .+...++
T Consensus       147 ~~~~~~~~~~~~~~~-----~~--------~p~~~~--~~~~~~-~~~~~~~-~-~~~~~~~iLv~~g~----~~~~~l~  204 (321)
T TIGR00661       147 ERCERFIVPDYPFPY-----TI--------CPKIIK--NMEGPL-IRYDVDD-V-DNYGEDYILVYIGF----EYRYKIL  204 (321)
T ss_pred             cccceEeeecCCCCC-----CC--------Cccccc--cCCCcc-cchhhhc-c-ccCCCCcEEEECCc----CCHHHHH
Confidence            334444332211000     00        010000  000 11 0000000 0 01223445566544    3456778


Q ss_pred             HHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeC
Q 009759          343 RVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       343 ~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~  422 (526)
                      +++++++++.+++.+.....+   .+  ..|+.+.++.+ +++.++|..||++|.-+    ...++.||+++|+|+|...
T Consensus       205 ~~l~~~~~~~~i~~~~~~~~~---~~--~~~v~~~~~~~-~~~~~~l~~ad~vI~~~----G~~t~~Ea~~~g~P~l~ip  274 (321)
T TIGR00661       205 ELLGKIANVKFVCYSYEVAKN---SY--NENVEIRRITT-DNFKELIKNAELVITHG----GFSLISEALSLGKPLIVIP  274 (321)
T ss_pred             HHHHhCCCeEEEEeCCCCCcc---cc--CCCEEEEECCh-HHHHHHHHhCCEEEECC----ChHHHHHHHHcCCCEEEEc
Confidence            888888876665543221111   11  23799999876 68999999999999543    3457999999999999988


Q ss_pred             CCCCCc------eecccCCCceeEeeCCCCHHHHHHHHHHhhhCH
Q 009759          423 AGGIPD------IIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ  461 (526)
Q Consensus       423 ~gg~~e------~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~  461 (526)
                      ..+..|      .+   ++.+.|..++..+. ++.+++...+.++
T Consensus       275 ~~~~~eQ~~na~~l---~~~g~~~~l~~~~~-~~~~~~~~~~~~~  315 (321)
T TIGR00661       275 DLGQFEQGNNAVKL---EDLGCGIALEYKEL-RLLEAILDIRNMK  315 (321)
T ss_pred             CCCcccHHHHHHHH---HHCCCEEEcChhhH-HHHHHHHhccccc
Confidence            765433      23   45566777776666 5555555555443

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.34  E-value=1e-09  Score=104.99  Aligned_cols=345  Identities=16%  Similarity=0.169  Sum_probs=210.4

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCC-CeEEEEEeCCCCCcccc--Cceeccc--cccCCCcc----cccc
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMG-DEVMVVTTHEGVPQEFY--GAKLIGS--RSFPCPWY----QKVP  187 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G-~~V~vi~~~~~~~~~~~--~~~~~~~--~~~~~~~~----~~~~  187 (526)
                      .+|||++|...-|-      -.-+..+++++.+.+ .+..++.++.....+..  ..+..++  +.+.+...    ....
T Consensus         2 ~~~Kv~~I~GTRPE------~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~~~tl~~   75 (383)
T COG0381           2 KMLKVLTIFGTRPE------AIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKPGQTLGE   75 (383)
T ss_pred             CceEEEEEEecCHH------HHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhccccCCCHHH
Confidence            35899999765442      256788999999987 77777776544321110  0011111  11111111    0011


Q ss_pred             chhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCc
Q 009759          188 LSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  267 (526)
Q Consensus       188 ~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  267 (526)
                      ..-.....+.+++.+.+||+|.+|+.....+++.+++...++|+....-+.....   ..  +   .-....+..-..+|
T Consensus        76 ~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~~---~~--~---PEE~NR~l~~~~S~  147 (383)
T COG0381          76 ITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTGD---LY--F---PEEINRRLTSHLSD  147 (383)
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccccCC---CC--C---cHHHHHHHHHHhhh
Confidence            1123445778888999999999999888888878889999999875444422110   00  0   01112344566789


Q ss_pred             EEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCC---CcccHHHHHhhcCCCCCC-cEEEEEecc-cccccHHHHH
Q 009759          268 LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHP---RFRSSEMRWRLSNGEPDK-PLIVHVGRL-GVEKSLDFLK  342 (526)
Q Consensus       268 ~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~---~~~~~~~~~~~~~~~~~~-~~i~~vG~l-~~~Kg~~~li  342 (526)
                      .-+++++..++.+.+.+. +.+++.++.|.+-......   ..........+ +...++ .+++..=|- ...+++..++
T Consensus       148 ~hfapte~ar~nLl~EG~-~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~-~~~~~~~~iLvT~HRreN~~~~~~~i~  225 (383)
T COG0381         148 LHFAPTEIARKNLLREGV-PEKRIFVTGNTVIDALLNTRDRVLEDSKILAKG-LDDKDKKYILVTAHRRENVGEPLEEIC  225 (383)
T ss_pred             hhcCChHHHHHHHHHcCC-CccceEEeCChHHHHHHHHHhhhccchhhHHhh-hccccCcEEEEEcchhhcccccHHHHH
Confidence            999999999999999886 6778999998753221111   11111122111 223333 344444343 2237777777


Q ss_pred             HHHHhC----CCcEEEEEeCC-c-cHHHH-HHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcC
Q 009759          343 RVMDRL----PEARIAFIGDG-P-YREEL-EKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG  415 (526)
Q Consensus       343 ~a~~~l----~~~~l~ivG~g-~-~~~~l-~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G  415 (526)
                      +++.++    +++.++.--.. + .++.. +.+....+|+++..+...++..+++.|-+++--|     |...=||-..|
T Consensus       226 ~al~~i~~~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg  300 (383)
T COG0381         226 EALREIAEEYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLG  300 (383)
T ss_pred             HHHHHHHHhCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcC
Confidence            766554    56666654422 1 12222 2232334799999999999999999998887333     67889999999


Q ss_pred             CcEEEeCCC-CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 009759          416 IPVVGVRAG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  487 (526)
Q Consensus       416 ~PvI~~~~g-g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~  487 (526)
                      +||++-..+ .-+|.+   +.| .-.++. .+.+.+.+++..++++++.+++|+...--+-.-.+.+++++-+
T Consensus       301 ~Pvl~lR~~TERPE~v---~ag-t~~lvg-~~~~~i~~~~~~ll~~~~~~~~m~~~~npYgdg~as~rIv~~l  368 (383)
T COG0381         301 KPVLVLRDTTERPEGV---EAG-TNILVG-TDEENILDAATELLEDEEFYERMSNAKNPYGDGNASERIVEIL  368 (383)
T ss_pred             CcEEeeccCCCCccce---ecC-ceEEeC-ccHHHHHHHHHHHhhChHHHHHHhcccCCCcCcchHHHHHHHH
Confidence            999987554 556666   333 333443 3789999999999999999888865443333222444444433

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.33  E-value=3.6e-10  Score=107.10  Aligned_cols=337  Identities=14%  Similarity=0.114  Sum_probs=212.9

Q ss_pred             CCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHHHhcCCCEEE
Q 009759          130 FSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIH  209 (526)
Q Consensus       130 ~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiV~  209 (526)
                      ....+|.......+.++|...||+|+++-.+............-.       ...........-......++.+++|+|+
T Consensus        10 ~~y~~~~~~~~~~~~~~l~~~g~kvlflE~~~~~~~k~rd~~~~~-------~~~~~~~~~~~e~~~~~~i~~fk~d~iv   82 (373)
T COG4641          10 SDYNNGSAEYYRGLLRALKMDGMKVLFLESGDFWDYKNRDIDAED-------GCTEAFYKDQPELESLLYIREFKPDIIV   82 (373)
T ss_pred             hhhcCCchhhHHHHHHHHHhccceEEEEecccHHhhhcccccCcc-------chhheeecCcHHHHHHHHHHhcCCcEEE
Confidence            355678888889999999999999999987654322211110000       0000000011112445567889999998


Q ss_pred             ECCCc-----hHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhH-HHHHHHh
Q 009759          210 ASSPG-----IMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAI-GKDLEAA  283 (526)
Q Consensus       210 ~~~~~-----~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~-~~~l~~~  283 (526)
                      .....     ......+...+..++|+++..-+.. ........ +.   -..+.+..+-..|.|++.+... +..+.+.
T Consensus        83 ~~~~~~~~~~~~~~~~~a~l~~~~l~~~~w~te~p-~~~~~~~~-~~---~~~~~~~~l~~fd~v~~~g~~l~~~~yyq~  157 (373)
T COG4641          83 NMSGDDQPDEESTIDLWAWLKRKCLPVIVWYTEDP-YDTDIFSQ-VA---EEQLARRPLFIFDNVLSFGGGLVANKYYQE  157 (373)
T ss_pred             EecccccccceehHHHHHHhhcCCcceEEEEeccc-hhhhhhhh-hh---HHHhhccccchhhhhhhccchHHHHHHHHh
Confidence            86543     2222233445667788666554422 11111100 00   0011111222344466666666 5555544


Q ss_pred             cccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHH----HhCC-CcEEEEEeC
Q 009759          284 RVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVM----DRLP-EARIAFIGD  358 (526)
Q Consensus       284 ~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~----~~l~-~~~l~ivG~  358 (526)
                      ++  ..++..++.++|.+.+.+....          ..-.-.+.++|+..+. ..+.+-+.+    .++. +-++.+.|.
T Consensus       158 ~~--~~~~~~~~~a~d~~~~~~i~~d----------a~~~~dL~~ign~~pD-r~e~~ke~~~~ps~kl~v~rr~~~~g~  224 (373)
T COG4641         158 GG--ARNCYYLPWAVDDSLFHPIPPD----------ASYDVDLNLIGNPYPD-RVEEIKEFFVEPSFKLMVDRRFYVLGP  224 (373)
T ss_pred             hc--ccceeccCccCCchhcccCCcc----------ccceeeeEEecCCCcc-HHHHHHHHhhccchhhhccceeeecCC
Confidence            43  3688899999999999876422          1223368889987555 233333333    2222 356777776


Q ss_pred             CccHHHHHHHhcCCCeEEecccCh-hhHHHHHHcCcEEEecCCC---CC---CcHHHHHHHHcCCcEEEeCCCCCCceec
Q 009759          359 GPYREELEKMFTGMPAVFTGMLLG-EELSQAYASGDVFVMPSES---ET---LGLVVLEAMSSGIPVVGVRAGGIPDIIP  431 (526)
Q Consensus       359 g~~~~~l~~l~~~~~V~~~g~v~~-~~l~~~~~~aDv~v~ps~~---e~---~~~~ilEAma~G~PvI~~~~gg~~e~v~  431 (526)
                      . +...+....-..++.+.|+++. +.+...++..|+.+.-++.   ++   ..+.+.|+++||.+.|+....++.-++ 
T Consensus       225 ~-y~~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f-  302 (373)
T COG4641         225 R-YPDDIWGRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFF-  302 (373)
T ss_pred             c-cchhhhcccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhc-
Confidence            4 2233322222347888898877 7888999999999876552   22   378999999999999999988888888 


Q ss_pred             ccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHH
Q 009759          432 EDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWF  498 (526)
Q Consensus       432 ~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~~l~~  498 (526)
                        .+|+.-++..  |..++.+.+.+++..++.++++++.+.+.+ ..|+.++-+.+++ +...++..+
T Consensus       303 --~pgk~~iv~~--d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~-~~i~sI~~r  365 (373)
T COG4641         303 --KPGKDIIVYQ--DSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLL-NEIASINIR  365 (373)
T ss_pred             --CCchheEEec--CHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHH-HHHHHHHHh
Confidence              7777766666  999999999999999999999999999998 4799999998887 344444443

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.32  E-value=3.3e-10  Score=110.90  Aligned_cols=309  Identities=17%  Similarity=0.163  Sum_probs=186.0

Q ss_pred             chHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCce-eccccccCCC----ccccccchhcccHHHHHHHHhcCCCEEE
Q 009759          135 GYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAK-LIGSRSFPCP----WYQKVPLSLALSPRIISEVARFKPDIIH  209 (526)
Q Consensus       135 G~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~pDiV~  209 (526)
                      .+..+...|+++|++++-++.++.-+...... .|.+ ......+..-    ...+++........+.+.+.+.+||+++
T Consensus         9 SGD~~ga~Li~~Lk~~~p~~~~~GvGG~~M~~-~G~~~l~d~~~lsvmG~~Evl~~l~~~~~~~~~~~~~~~~~~pd~vI   87 (373)
T PF02684_consen    9 SGDLHGARLIRALKARDPDIEFYGVGGPRMQA-AGVESLFDMEELSVMGFVEVLKKLPKLKRLFRKLVERIKEEKPDVVI   87 (373)
T ss_pred             cHHHHHHHHHHHHHhhCCCcEEEEEechHHHh-CCCceecchHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence            34677899999999999899998876543322 1111 1111111111    1223334445556777788889999999


Q ss_pred             ECCCchHHHHHHHHHHhcCCC--EEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccC
Q 009759          210 ASSPGIMVFGALIIAKLLCVP--IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTA  287 (526)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~p--~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~  287 (526)
                      .-+...+.+......+..+++  +++++--   .-     +.|..    ...+.+-+.+|.+++.=+...+.+.+.+.  
T Consensus        88 lID~pgFNlrlak~lk~~~~~~~viyYI~P---qv-----WAWr~----~R~~~i~~~~D~ll~ifPFE~~~y~~~g~--  153 (373)
T PF02684_consen   88 LIDYPGFNLRLAKKLKKRGIPIKVIYYISP---QV-----WAWRP----GRAKKIKKYVDHLLVIFPFEPEFYKKHGV--  153 (373)
T ss_pred             EeCCCCccHHHHHHHHHhCCCceEEEEECC---ce-----eeeCc----cHHHHHHHHHhheeECCcccHHHHhccCC--
Confidence            987655544444455666776  6655432   11     11111    22455677899999999999999998863  


Q ss_pred             CCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecc-cc-cccHHHHHHHHHhC----CCcEEEEEeCCcc
Q 009759          288 ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GV-EKSLDFLKRVMDRL----PEARIAFIGDGPY  361 (526)
Q Consensus       288 ~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l-~~-~Kg~~~li~a~~~l----~~~~l~ivG~g~~  361 (526)
                        ++..+.|++-.. ..+.......+..+ +..++..+.+..|+= .. .+.+..++++++.+    |++++++......
T Consensus       154 --~~~~VGHPl~d~-~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~  229 (373)
T PF02684_consen  154 --PVTYVGHPLLDE-VKPEPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV  229 (373)
T ss_pred             --CeEEECCcchhh-hccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH
Confidence              677777775332 22332334444444 433344455666743 22 34567777877665    7899988775443


Q ss_pred             HHH-HHHHhcCC--CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe-CCCC------------
Q 009759          362 REE-LEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV-RAGG------------  425 (526)
Q Consensus       362 ~~~-l~~l~~~~--~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~-~~gg------------  425 (526)
                      .+. +++.....  ++.+.-  ...+-.+.|+.||+.+..|     |++.+|++.+|+|.|+. ..+.            
T Consensus       230 ~~~~i~~~~~~~~~~~~~~~--~~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~  302 (373)
T PF02684_consen  230 HEELIEEILAEYPPDVSIVI--IEGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKV  302 (373)
T ss_pred             HHHHHHHHHHhhCCCCeEEE--cCCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcC
Confidence            333 44443332  233221  2256788999999999776     89999999999998754 3332            


Q ss_pred             ----CCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHH
Q 009759          426 ----IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQA  470 (526)
Q Consensus       426 ----~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~  470 (526)
                          +..++-. +.-..-++-+..+++.+++++..++.|++.++...+.
T Consensus       303 ~~isL~Niia~-~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~~~~~  350 (373)
T PF02684_consen  303 KYISLPNIIAG-REVVPELIQEDATPENIAAELLELLENPEKRKKQKEL  350 (373)
T ss_pred             CEeechhhhcC-CCcchhhhcccCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence                2222200 0001112334458999999999999998764444333

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=99.28  E-value=7.7e-10  Score=105.62  Aligned_cols=324  Identities=16%  Similarity=0.138  Sum_probs=194.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCce-eccccccCCC----ccccccchhccc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAK-LIGSRSFPCP----WYQKVPLSLALS  193 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~  193 (526)
                      |||++++..      -.+......|+++|+++=-+|.++.-+....... +.+ ......+..-    ....++..+...
T Consensus         2 ~ki~i~AGE------~SGDllGa~LikaLk~~~~~~efvGvgG~~m~ae-G~~sl~~~~elsvmGf~EVL~~lp~llk~~   74 (381)
T COG0763           2 LKIALSAGE------ASGDLLGAGLIKALKARYPDVEFVGVGGEKMEAE-GLESLFDMEELSVMGFVEVLGRLPRLLKIR   74 (381)
T ss_pred             ceEEEEecc------cchhhHHHHHHHHHHhhCCCeEEEEeccHHHHhc-cCccccCHHHHHHhhHHHHHHHHHHHHHHH
Confidence            688888643      1234667789999998844899988765432211 110 0000001000    111222233344


Q ss_pred             HHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcC--CCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEe
Q 009759          194 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC--VPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  271 (526)
Q Consensus       194 ~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~--~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  271 (526)
                      +.+.+.+...+||++++-+...+.+......++.+  +|+|+++--   .-+     .|  +.  .....+.+.+|++++
T Consensus        75 ~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~P---sVW-----AW--r~--~Ra~~i~~~~D~lLa  142 (381)
T COG0763          75 RELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSP---SVW-----AW--RP--KRAVKIAKYVDHLLA  142 (381)
T ss_pred             HHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECc---cee-----ee--ch--hhHHHHHHHhhHeee
Confidence            45556666789999998775444443333344444  888865532   111     11  11  114556788999999


Q ss_pred             CChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEeccc--ccccHHHHHHHHHhC-
Q 009759          272 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG--VEKSLDFLKRVMDRL-  348 (526)
Q Consensus       272 ~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~--~~Kg~~~li~a~~~l-  348 (526)
                      .=+...+.+.+.+.    .++.+.+..-.+.. ...+++..+.+++...+.+.+.+..|+-.  -.+.+..+.+++..+ 
T Consensus       143 ilPFE~~~y~k~g~----~~~yVGHpl~d~i~-~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~  217 (381)
T COG0763         143 ILPFEPAFYDKFGL----PCTYVGHPLADEIP-LLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELK  217 (381)
T ss_pred             ecCCCHHHHHhcCC----CeEEeCChhhhhcc-ccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHH
Confidence            99999999998875    36667666533321 23345668888887666677777888542  234566777777655 


Q ss_pred             ---CCcEEEEEeCCccHHHHHHHhcCCCe-EEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe-CC
Q 009759          349 ---PEARIAFIGDGPYREELEKMFTGMPA-VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV-RA  423 (526)
Q Consensus       349 ---~~~~l~ivG~g~~~~~l~~l~~~~~V-~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~-~~  423 (526)
                         |+.+|++--.....+.+.....+.++ ...-.+.+.+-.+.|.+||+.+..|     |++.+|++.+|+|.|++ .+
T Consensus       218 ~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~  292 (381)
T COG0763         218 ARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKV  292 (381)
T ss_pred             hhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEec
Confidence               78999997765543333333322222 1233344467889999999999766     89999999999998865 33


Q ss_pred             CC----------------CCceecccCCC--ceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHH
Q 009759          424 GG----------------IPDIIPEDQDG--KIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE  474 (526)
Q Consensus       424 gg----------------~~e~v~~~~~~--~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~  474 (526)
                      ..                ++.++   -+.  ..-++-+.-.++.+++++..++.|...++++.+..++.
T Consensus       293 ~~it~~iak~lvk~~yisLpNIi---~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l  358 (381)
T COG0763         293 KPITYFIAKRLVKLPYVSLPNIL---AGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFREL  358 (381)
T ss_pred             cHHHHHHHHHhccCCcccchHHh---cCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHH
Confidence            22                22222   100  00111123368999999999999986666665554444

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.26  E-value=1.3e-09  Score=111.03  Aligned_cols=324  Identities=11%  Similarity=0.056  Sum_probs=194.9

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCce-eccccccCCC----ccccccchhccc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAK-LIGSRSFPCP----WYQKVPLSLALS  193 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~  193 (526)
                      .||.+++..      -.+..+...|+++|+++.-++.+..-+...... .|.+ ......+..-    ....++......
T Consensus       227 ~kIfI~AGE------~SGDlhgA~Li~aLk~~~P~i~~~GvGG~~M~a-aG~e~l~d~~eLsVmG~~EVL~~l~~l~~~~  299 (608)
T PRK01021        227 TSCFISAGE------HSGDTLGGNLLKEIKALYPDIHCFGVGGPQMRA-EGFHPLFNMEEFQVSGFWEVLLALFKLWYRY  299 (608)
T ss_pred             CeEEEEecc------ccHHHHHHHHHHHHHhcCCCcEEEEEccHHHHh-CcCcccCChHHhhhhhHHHHHHHHHHHHHHH
Confidence            388777542      134567789999999998889888876543221 1111 1111111110    112223334455


Q ss_pred             HHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCC--CEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEe
Q 009759          194 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCV--PIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  271 (526)
Q Consensus       194 ~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~--p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  271 (526)
                      ..+.+.+++.+||++++-+...+.+.....+++.|+  |+++++--   .-+     .|..    ...+.+-+.+|.+++
T Consensus       300 ~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsP---qVW-----AWR~----~Rikki~k~vD~ll~  367 (608)
T PRK01021        300 RKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCP---SIW-----AWRP----KRKTILEKYLDLLLL  367 (608)
T ss_pred             HHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECc---cce-----eeCc----chHHHHHHHhhhhee
Confidence            667777888899999997754444444445566675  88765532   111     1111    124566788999999


Q ss_pred             CChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecc-cc-cccHHHHHHHHH--h
Q 009759          272 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GV-EKSLDFLKRVMD--R  347 (526)
Q Consensus       272 ~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l-~~-~Kg~~~li~a~~--~  347 (526)
                      .=+.+.+.+++.+.    ++..+.|+.-.. ........+.+.+++...+++.+.+..|+= .+ .+.+..++++++  .
T Consensus       368 IfPFE~~~y~~~gv----~v~yVGHPL~d~-i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~  442 (608)
T PRK01021        368 ILPFEQNLFKDSPL----RTVYLGHPLVET-ISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASS  442 (608)
T ss_pred             cCccCHHHHHhcCC----CeEEECCcHHhh-cccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999998653    677777776332 222234455677776633444455677753 22 356788899988  6


Q ss_pred             C-CCcEEEEEeCCc-cHHHHHHHhcCCC---eEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe-
Q 009759          348 L-PEARIAFIGDGP-YREELEKMFTGMP---AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV-  421 (526)
Q Consensus       348 l-~~~~l~ivG~g~-~~~~l~~l~~~~~---V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~-  421 (526)
                      + ++.++++....+ ..+.+++..++.+   +.+.   +.++-.++|++||+.+..|     |.+.+|++.+|+|.|+. 
T Consensus       443 l~~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii---~~~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~Y  514 (608)
T PRK01021        443 LASTHQLLVSSANPKYDHLILEVLQQEGCLHSHIV---PSQFRYELMRECDCALAKC-----GTIVLETALNQTPTIVTC  514 (608)
T ss_pred             hccCeEEEEecCchhhHHHHHHHHhhcCCCCeEEe---cCcchHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEEEE
Confidence            6 567887754333 3455666554322   3332   1123479999999999776     89999999999998763 


Q ss_pred             CCCCC------------------CceecccCCCceeEe--eCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHH
Q 009759          422 RAGGI------------------PDIIPEDQDGKIGYL--FNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME  476 (526)
Q Consensus       422 ~~gg~------------------~e~v~~~~~~~~g~~--~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~  476 (526)
                      ..+.+                  ..++-. +.-..-++  -+..+++.+++++ +++.|++.++++.+...+..+
T Consensus       515 K~s~Lty~Iak~Lvki~i~yIsLpNIIag-r~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~  587 (608)
T PRK01021        515 QLRPFDTFLAKYIFKIILPAYSLPNIILG-STIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDLYQ  587 (608)
T ss_pred             ecCHHHHHHHHHHHhccCCeeehhHHhcC-CCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHH
Confidence            33321                  111100 00011122  1345899999996 888888877777665555443

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=99.23  E-value=2.4e-09  Score=108.41  Aligned_cols=155  Identities=15%  Similarity=0.146  Sum_probs=100.0

Q ss_pred             CCcEEEEEecccccc--cHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecC
Q 009759          322 DKPLIVHVGRLGVEK--SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  399 (526)
Q Consensus       322 ~~~~i~~vG~l~~~K--g~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps  399 (526)
                      ...+++..|+.....  -++.+++++..++...++..|.+...+.+...  ..+|.+.+++++.   ++|..||++|..+
T Consensus       225 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~--~~~v~~~~~~p~~---~ll~~~~~~I~hg  299 (392)
T TIGR01426       225 RPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADLGEL--PPNVEVRQWVPQL---EILKKADAFITHG  299 (392)
T ss_pred             CCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChhHhccC--CCCeEEeCCCCHH---HHHhhCCEEEECC
Confidence            344567778763332  35556677776643334456655443333322  2479999999753   6789999999533


Q ss_pred             CCCCCcHHHHHHHHcCCcEEEeCCCCCCc----eecccCCCceeEeeCC--CCHHHHHHHHHHhhhCHHHHHHHHHHHHH
Q 009759          400 ESETLGLVVLEAMSSGIPVVGVRAGGIPD----IIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQAARQ  473 (526)
Q Consensus       400 ~~e~~~~~ilEAma~G~PvI~~~~gg~~e----~v~~~~~~~~g~~~~~--~d~~~la~ai~~ll~d~~~~~~~~~~a~~  473 (526)
                          ..++++||+++|+|+|+....+-..    .+   .+.+.|..+..  -++++++++|.+++.|++.++++.+-+..
T Consensus       300 ----G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l---~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~  372 (392)
T TIGR01426       300 ----GMNSTMEALFNGVPMVAVPQGADQPMTARRI---AELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRAE  372 (392)
T ss_pred             ----CchHHHHHHHhCCCEEecCCcccHHHHHHHH---HHCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence                3468999999999999976654322    23   34455665553  36899999999999998876666444433


Q ss_pred             HHHhCCHHHHHHHHH
Q 009759          474 EMEKYDWRAATRTIR  488 (526)
Q Consensus       474 ~~~~fs~~~~~~~~~  488 (526)
                      ....-..+..++.++
T Consensus       373 ~~~~~~~~~aa~~i~  387 (392)
T TIGR01426       373 IREAGGARRAADEIE  387 (392)
T ss_pred             HHHcCCHHHHHHHHH
Confidence            334456666666554

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases

Probab=99.23  E-value=3.9e-10  Score=98.55  Aligned_cols=176  Identities=16%  Similarity=0.106  Sum_probs=113.8

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCC---ccccCceeccccccCCCccccccchhcccHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVP---QEFYGAKLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      .||+|+...--....||.+..+.+|+..|.++|++|+|++......   ..+.+.+...+..........+...+.....
T Consensus         2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~   81 (185)
T PF09314_consen    2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLH   81 (185)
T ss_pred             ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHH
Confidence            3799996653337899999999999999999999999999865442   2334444444332222111122222222222


Q ss_pred             HHHHHHh--cCCCEEEECCCchHHHHHHHHH--HhcCCCEEEEEecCCccccccccc-ccccchHHHHHHHHhhcCcEEE
Q 009759          196 IISEVAR--FKPDIIHASSPGIMVFGALIIA--KLLCVPIVMSYHTHVPVYIPRYTF-SWLVKPMWLVIKFLHRAADLTL  270 (526)
Q Consensus       196 l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~--~~~~~p~v~~~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ad~ii  270 (526)
                      .....+.  .+.|+++++......+...+..  +..|.|+++..|+..   ..+..+ ...++.++..|+.+.+.+|.+|
T Consensus        82 al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlE---WkR~KW~~~~k~~lk~~E~~avk~ad~lI  158 (185)
T PF09314_consen   82 ALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLE---WKRAKWGRPAKKYLKFSEKLAVKYADRLI  158 (185)
T ss_pred             HHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcch---hhhhhcCHHHHHHHHHHHHHHHHhCCEEE
Confidence            2222332  3678999987653332223333  334679998887743   222222 2334455677888999999999


Q ss_pred             eCChhHHHHHHHhcccCCCcEEEeecCCC
Q 009759          271 VPSVAIGKDLEAARVTAANKIRIWKKGVD  299 (526)
Q Consensus       271 ~~S~~~~~~l~~~~~~~~~ki~vi~ngid  299 (526)
                      +.|+..++++.+.++  ..+..+|++|.|
T Consensus       159 aDs~~I~~y~~~~y~--~~~s~~IaYGad  185 (185)
T PF09314_consen  159 ADSKGIQDYIKERYG--RKKSTFIAYGAD  185 (185)
T ss_pred             EcCHHHHHHHHHHcC--CCCcEEecCCCC
Confidence            999999999999985  468889999976

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like

Probab=99.16  E-value=6.1e-10  Score=95.06  Aligned_cols=136  Identities=26%  Similarity=0.334  Sum_probs=91.2

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc--ccCceeccccccCCCccccccchhcccHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE--FYGAKLIGSRSFPCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (526)
                      ||+++++..        +.++.++++.|.+.||+|++++...+....  ..+..+...   +.+...  .........+.
T Consensus         1 KIl~i~~~~--------~~~~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~~~i~~~~~---~~~~k~--~~~~~~~~~l~   67 (139)
T PF13477_consen    1 KILLIGNTP--------STFIYNLAKELKKRGYDVHIITPRNDYEKYEIIEGIKVIRL---PSPRKS--PLNYIKYFRLR   67 (139)
T ss_pred             CEEEEecCc--------HHHHHHHHHHHHHCCCEEEEEEcCCCchhhhHhCCeEEEEe---cCCCCc--cHHHHHHHHHH
Confidence            688887742        357889999999999999999996654211  223333322   212111  22211245889


Q ss_pred             HHHHhcCCCEEEECCCchHHHHHHHHHHhcC-CCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCC
Q 009759          198 SEVARFKPDIIHASSPGIMVFGALIIAKLLC-VPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS  273 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~-~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S  273 (526)
                      +.+++.+||+||+|......+.+.++++..+ +|+|++.|+..- ....    ...+..+.+.+.+++.+|.+++.|
T Consensus        68 k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~-~~~~----~~~~~~~~~~~~~~k~~~~ii~~~  139 (139)
T PF13477_consen   68 KIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDF-YNSS----KKKKLKKFIIKFAFKRADKIIVQS  139 (139)
T ss_pred             HHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCee-ecCC----chHHHHHHHHHHHHHhCCEEEEcC
Confidence            9999999999999998665555666677777 999999998532 1111    111134567889999999999875

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=99.14  E-value=3.4e-09  Score=106.53  Aligned_cols=156  Identities=15%  Similarity=0.173  Sum_probs=102.7

Q ss_pred             CCcEEEEEecccccc-cHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCC
Q 009759          322 DKPLIVHVGRLGVEK-SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE  400 (526)
Q Consensus       322 ~~~~i~~vG~l~~~K-g~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~  400 (526)
                      .+++.+..|+..... -+..+++++..+ +.++++...+ ........  ..|+...+++++.+   ++..||++|.   
T Consensus       237 ~~~vyvslGt~~~~~~l~~~~~~a~~~l-~~~vi~~~~~-~~~~~~~~--p~n~~v~~~~p~~~---~l~~ad~vI~---  306 (406)
T COG1819         237 RPIVYVSLGTVGNAVELLAIVLEALADL-DVRVIVSLGG-ARDTLVNV--PDNVIVADYVPQLE---LLPRADAVIH---  306 (406)
T ss_pred             CCeEEEEcCCcccHHHHHHHHHHHHhcC-CcEEEEeccc-cccccccC--CCceEEecCCCHHH---HhhhcCEEEe---
Confidence            445556677765442 234455666666 5666666533 22222221  33899999997554   7999999994   


Q ss_pred             CCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeC--CCCHHHHHHHHHHhhhCHHHHHHHHHHHHHH
Q 009759          401 SETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFN--PGDLDDCLSKLEPLLYNQELRETMGQAARQE  474 (526)
Q Consensus       401 ~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~--~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~  474 (526)
                       .|.-+++.||+.+|+|+|+-..+.    ..+.+   ++-..|....  .-+++.++++|.+++.|+..++...+..+..
T Consensus       307 -hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv---e~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~  382 (406)
T COG1819         307 -HGGAGTTSEALYAGVPLVVIPDGADQPLNAERV---EELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAERLAEEF  382 (406)
T ss_pred             -cCCcchHHHHHHcCCCEEEecCCcchhHHHHHH---HHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence             455678999999999999887663    22334   5566777666  5789999999999999988777665544444


Q ss_pred             HHhCCHHHHHHHHHHHHH
Q 009759          475 MEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       475 ~~~fs~~~~~~~~~~~ly  492 (526)
                      .+.-..+.+++.+. ++.
T Consensus       383 ~~~~g~~~~a~~le-~~~  399 (406)
T COG1819         383 KEEDGPAKAADLLE-EFA  399 (406)
T ss_pred             hhcccHHHHHHHHH-HHH
Confidence            34555555555553 443

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=99.13  E-value=1.3e-09  Score=107.22  Aligned_cols=276  Identities=14%  Similarity=0.113  Sum_probs=153.3

Q ss_pred             ccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEe
Q 009759          192 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  271 (526)
Q Consensus       192 ~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  271 (526)
                      ....+.+.+.+.+||+|++++.....+++.+.+...++|++ ++|.-...+  +.....   .-......+-+.++..++
T Consensus        55 ~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~-HieaGlRs~--d~~~g~---~de~~R~~i~~la~lhf~  128 (346)
T PF02350_consen   55 AIIELADVLEREKPDAVLVLGDRNEALAAALAAFYLNIPVA-HIEAGLRSG--DRTEGM---PDEINRHAIDKLAHLHFA  128 (346)
T ss_dssp             HHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHHTT-EEE-EES-----S---TTSST---THHHHHHHHHHH-SEEEE
T ss_pred             HHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHHhCCCEE-EecCCCCcc--ccCCCC---chhhhhhhhhhhhhhhcc
Confidence            34577788889999999999988888888889999999954 455431111  000011   112334556678999999


Q ss_pred             CChhHHHHHHHhcccCCCcEEEeecCCCCCCCCC-CcccHHH-HHhhcCCCCCCcEEEEEecccc---cccHHHHHHHHH
Q 009759          272 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHP-RFRSSEM-RWRLSNGEPDKPLIVHVGRLGV---EKSLDFLKRVMD  346 (526)
Q Consensus       272 ~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~-~~~~~~~-~~~~~~~~~~~~~i~~vG~l~~---~Kg~~~li~a~~  346 (526)
                      .++..++.+.+.+. +.++|.++.|..-...... ....... ...+.....++.+++..=+...   ......+.++++
T Consensus       129 ~t~~~~~~L~~~G~-~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~  207 (346)
T PF02350_consen  129 PTEEARERLLQEGE-PPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALK  207 (346)
T ss_dssp             SSHHHHHHHHHTT---GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHH
T ss_pred             CCHHHHHHHHhcCC-CCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHH
Confidence            99999999999875 6789999887542211100 0000011 1111001233444444422221   233444444444


Q ss_pred             ---hCCCcEEEEEeC--CccHHHHHHHhcCC-CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEE
Q 009759          347 ---RLPEARIAFIGD--GPYREELEKMFTGM-PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  420 (526)
Q Consensus       347 ---~l~~~~l~ivG~--g~~~~~l~~l~~~~-~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~  420 (526)
                         +.+++.+++...  ......+.+..... ++++...+++.++..+++.|+++|--|     |+.+-||..+|+|+|.
T Consensus       208 ~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~vvgdS-----sGI~eEa~~lg~P~v~  282 (346)
T PF02350_consen  208 ALAERQNVPVIFPLHNNPRGSDIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADLVVGDS-----SGIQEEAPSLGKPVVN  282 (346)
T ss_dssp             HHHHHTTEEEEEE--S-HHHHHHHHHHHTT-TTEEEE----HHHHHHHHHHESEEEESS-----HHHHHHGGGGT--EEE
T ss_pred             HHHhcCCCcEEEEecCCchHHHHHHHHhcccCCEEEECCCCHHHHHHHHhcceEEEEcC-----ccHHHHHHHhCCeEEE
Confidence               436788888775  33444555444432 899999999999999999999999333     4444499999999998


Q ss_pred             e-CCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          421 V-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       421 ~-~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      - +.|.-++..   ..+.+.+ +. .|.+++.++|.+++.+.+.+.++..    ...-|.-.+.++++.
T Consensus       283 iR~~geRqe~r---~~~~nvl-v~-~~~~~I~~ai~~~l~~~~~~~~~~~----~~npYgdG~as~rI~  342 (346)
T PF02350_consen  283 IRDSGERQEGR---ERGSNVL-VG-TDPEAIIQAIEKALSDKDFYRKLKN----RPNPYGDGNASERIV  342 (346)
T ss_dssp             CSSS-S-HHHH---HTTSEEE-ET-SSHHHHHHHHHHHHH-HHHHHHHHC----S--TT-SS-HHHHHH
T ss_pred             ecCCCCCHHHH---hhcceEE-eC-CCHHHHHHHHHHHHhChHHHHhhcc----CCCCCCCCcHHHHHH
Confidence            7 445556666   5565555 55 6999999999999988554444321    111354455555554

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=99.11  E-value=4.5e-08  Score=101.28  Aligned_cols=138  Identities=15%  Similarity=0.149  Sum_probs=94.7

Q ss_pred             CcEEEEEecccc-----cccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHH--HcCcEE
Q 009759          323 KPLIVHVGRLGV-----EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAY--ASGDVF  395 (526)
Q Consensus       323 ~~~i~~vG~l~~-----~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~--~~aDv~  395 (526)
                      ..+++..|+...     .+-+..+++++++++ .++++...+....  ..  ...||.+.+|+|+.+   ++  ..++++
T Consensus       297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-~~viw~~~~~~~~--~~--~p~Nv~i~~w~Pq~~---lL~hp~v~~f  368 (507)
T PHA03392        297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-YNVLWKYDGEVEA--IN--LPANVLTQKWFPQRA---VLKHKNVKAF  368 (507)
T ss_pred             cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-CeEEEEECCCcCc--cc--CCCceEEecCCCHHH---HhcCCCCCEE
Confidence            466778888642     344788899999987 4766655432221  11  124899999998755   45  568899


Q ss_pred             EecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCC--CCHHHHHHHHHHhhhCHHHHHHHHH
Q 009759          396 VMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQ  469 (526)
Q Consensus       396 v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~--~d~~~la~ai~~ll~d~~~~~~~~~  469 (526)
                      |    ..|..+++.||+.+|+|+|+....+    ....+   +..+.|..++.  -+.+++.++|.++++|+..++...+
T Consensus       369 I----tHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv---~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~  441 (507)
T PHA03392        369 V----TQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKY---VELGIGRALDTVTVSAAQLVLAIVDVIENPKYRKNLKE  441 (507)
T ss_pred             E----ecCCcccHHHHHHcCCCEEECCCCccHHHHHHHH---HHcCcEEEeccCCcCHHHHHHHHHHHhCCHHHHHHHHH
Confidence            8    4555679999999999999987643    22233   34556766653  3679999999999999887666655


Q ss_pred             HHHHHH
Q 009759          470 AARQEM  475 (526)
Q Consensus       470 ~a~~~~  475 (526)
                      -++...
T Consensus       442 ls~~~~  447 (507)
T PHA03392        442 LRHLIR  447 (507)
T ss_pred             HHHHHH
Confidence            554443

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=99.08  E-value=2.5e-08  Score=91.73  Aligned_cols=300  Identities=19%  Similarity=0.220  Sum_probs=183.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc---cCceeccccccC-CCccccccchhcccH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF---YGAKLIGSRSFP-CPWYQKVPLSLALSP  194 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~  194 (526)
                      |||.|=..+.|      ......++...|.++||+|.+.+...+...+.   .+.....+.... .....+.........
T Consensus         1 mkVwiDI~n~~------hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~g~~tl~~Kl~~~~eR~~   74 (346)
T COG1817           1 MKVWIDIGNPP------HVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSIGKHGGVTLKEKLLESAERVY   74 (346)
T ss_pred             CeEEEEcCCcc------hhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCCeEeecccCCccHHHHHHHHHHHHH
Confidence            67766544333      34678999999999999999999876643322   222222222221 111112333334445


Q ss_pred             HHHHHHHhcCCCEEEE-CCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCC
Q 009759          195 RIISEVARFKPDIIHA-SSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS  273 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~-~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S  273 (526)
                      .+.+++.+++||+.+. |++.     +...+...|+|.|+...+....               ...+..+..||.++++.
T Consensus        75 ~L~ki~~~~kpdv~i~~~s~~-----l~rvafgLg~psIi~~D~ehA~---------------~qnkl~~Pla~~ii~P~  134 (346)
T COG1817          75 KLSKIIAEFKPDVAIGKHSPE-----LPRVAFGLGIPSIIFVDNEHAE---------------AQNKLTLPLADVIITPE  134 (346)
T ss_pred             HHHHHHhhcCCceEeecCCcc-----hhhHHhhcCCceEEecCChhHH---------------HHhhcchhhhhheeccc
Confidence            7888899999999887 3332     2334567899988765543211               23566788999999999


Q ss_pred             hhHHHHHHHhcccCCCcEEEeecCCCC----CCCCCCcccHHHHHhhcCCCCCCcEEEEEec-----ccccccHHHHHHH
Q 009759          274 VAIGKDLEAARVTAANKIRIWKKGVDS----ESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR-----LGVEKSLDFLKRV  344 (526)
Q Consensus       274 ~~~~~~l~~~~~~~~~ki~vi~ngid~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~-----l~~~Kg~~~li~a  344 (526)
                      ....+.+...+. .+.++ +-.||+-.    ..|.|   +.+.-+++++...+..+++=.-.     ....++++.+.++
T Consensus       135 ~~~~~~~~~~G~-~p~~i-~~~~giae~~~v~~f~p---d~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~l  209 (346)
T COG1817         135 AIDEEELLDFGA-DPNKI-SGYNGIAELANVYGFVP---DPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDL  209 (346)
T ss_pred             ccchHHHHHhCC-Cccce-ecccceeEEeecccCCC---CHHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHH
Confidence            888888777765 33343 33445422    12333   45666777764444444442211     2445677778888


Q ss_pred             HHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          345 MDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       345 ~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      ++.+++.-.+++-...   ..++..++.++.+...-. -|-.+++-.|++++     .+.|...-||...|+|.|+..-|
T Consensus       210 i~~l~k~giV~ipr~~---~~~eife~~~n~i~pk~~-vD~l~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pG  280 (346)
T COG1817         210 IKELKKYGIVLIPREK---EQAEIFEGYRNIIIPKKA-VDTLSLLYYATLVI-----GAGGTMAREAALLGTPAISCYPG  280 (346)
T ss_pred             HHHHHhCcEEEecCch---hHHHHHhhhccccCCccc-ccHHHHHhhhheee-----cCCchHHHHHHHhCCceEEecCC
Confidence            8888776666666432   223333333322211111 24445888889988     55577788999999999998744


Q ss_pred             ---CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHH
Q 009759          425 ---GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQEL  463 (526)
Q Consensus       425 ---g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~  463 (526)
                         +...++     -+.|.++...|+.+..+.+.+++.++..
T Consensus       281 kll~vdk~l-----ie~G~~~~s~~~~~~~~~a~~~l~~~~~  317 (346)
T COG1817         281 KLLAVDKYL-----IEKGLLYHSTDEIAIVEYAVRNLKYRRL  317 (346)
T ss_pred             ccccccHHH-----HhcCceeecCCHHHHHHHHHHHhhchhh
Confidence               344444     3568888888888888888787776643

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2

Probab=99.06  E-value=6.3e-10  Score=104.14  Aligned_cols=164  Identities=20%  Similarity=0.206  Sum_probs=93.2

Q ss_pred             EEEEEe-ccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcccc--------------C-c--------ee---
Q 009759          120 RIALFV-EPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFY--------------G-A--------KL---  172 (526)
Q Consensus       120 kIliv~-~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~--------------~-~--------~~---  172 (526)
                      ||++|+ +..|+...||.+.++..|+++|+++||+|.|+.+.++......              + +        .+   
T Consensus         1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~v~~~   80 (245)
T PF08323_consen    1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGVWYEVRVYRY   80 (245)
T ss_dssp             EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE----EEEEEE
T ss_pred             CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEeccccccccccccceEEEEEEE
Confidence            789994 5557789999999999999999999999999999764221110              0 0        00   


Q ss_pred             --ccccccC--C-------Ccc--------ccccchhcccHHHHHHHHh--cCCCEEEECCCchHHHHHHHHHHh-----
Q 009759          173 --IGSRSFP--C-------PWY--------QKVPLSLALSPRIISEVAR--FKPDIIHASSPGIMVFGALIIAKL-----  226 (526)
Q Consensus       173 --~~~~~~~--~-------~~~--------~~~~~~~~~~~~l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~~~-----  226 (526)
                        .++..+-  .       ..+        ........+.+...+.+++  .+|||||+|+|+....+.++....     
T Consensus        81 ~~~~v~v~~i~~~~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~  160 (245)
T PF08323_consen   81 PVDGVPVYFIDNPEYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPF  160 (245)
T ss_dssp             EETTEEEEEEESHHHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS---
T ss_pred             EcCCccEEEecChhhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccc
Confidence              0000000  0       001        0001112234455566665  599999999998776655543322     


Q ss_pred             -cCCCEEEEEecCCccccc-c-----ccccccc---------chHHHHHHHHhhcCcEEEeCChhHHHHHHHh
Q 009759          227 -LCVPIVMSYHTHVPVYIP-R-----YTFSWLV---------KPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  283 (526)
Q Consensus       227 -~~~p~v~~~h~~~~~~~~-~-----~~~~~~~---------~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~  283 (526)
                       .++|+++++|+...+... .     ....+..         .....+.+..+..||.|+++|+.+++++.+.
T Consensus       161 ~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~~  233 (245)
T PF08323_consen  161 FANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQTP  233 (245)
T ss_dssp             ---SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred             cccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhCc
Confidence             159999999984322111 0     0001000         0011456788899999999999999987654

4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.05  E-value=1.5e-08  Score=91.82  Aligned_cols=297  Identities=13%  Similarity=0.106  Sum_probs=159.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      |||+|+++..+ ..+.|+-.+...|+++|.+.|..+.+++......-. .  ++...  +.....           +.-.
T Consensus         1 M~V~i~~Dgg~-~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~-~--~~~~~--f~~~~~-----------~~~n   63 (318)
T COG3980           1 MKVLIRCDGGL-EIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAII-H--KVYEG--FKVLEG-----------RGNN   63 (318)
T ss_pred             CcEEEEecCCc-ccCcchhhhHHHHHHHHHhcCceEEEecccchhhhh-h--hhhhh--ccceee-----------eccc
Confidence            89999999765 677889999999999999999999888765421100 0  00000  000000           1111


Q ss_pred             HHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHH
Q 009759          199 EVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGK  278 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~  278 (526)
                      .+++.++|++++.+.....-....++...+.++++. .+.....                    +...|.+  +..... 
T Consensus        64 ~ik~~k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~f-Dd~~~~~--------------------~~d~d~i--vN~~~~-  119 (318)
T COG3980          64 LIKEEKFDLLIFDSYGLNADDFKLIKEEAGSKILIF-DDENAKS--------------------FKDNDLI--VNAILN-  119 (318)
T ss_pred             ccccccCCEEEEeccCCCHHHHHHHHHHhCCcEEEe-cCCCccc--------------------hhhhHhh--hhhhhc-
Confidence            677889999999887655443444454667777753 2221100                    0112222  222221 


Q ss_pred             HHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCCCcEEEE-Ee
Q 009759          279 DLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAF-IG  357 (526)
Q Consensus       279 ~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~i-vG  357 (526)
                      ....++. -..+..+ .-|.+.-...+...  ..+..... .+.+.+++..|.-++.-=.-.++..+.+.+ +.+.| +|
T Consensus       120 a~~~y~~-v~~k~~~-~lGp~y~~lr~eF~--~~r~~~~~-r~~r~ilI~lGGsDpk~lt~kvl~~L~~~~-~nl~iV~g  193 (318)
T COG3980         120 ANDYYGL-VPNKTRY-YLGPGYAPLRPEFY--ALREENTE-RPKRDILITLGGSDPKNLTLKVLAELEQKN-VNLHIVVG  193 (318)
T ss_pred             chhhccc-cCcceEE-EecCCceeccHHHH--HhHHHHhh-cchheEEEEccCCChhhhHHHHHHHhhccC-eeEEEEec
Confidence            1122222 2234332 33444433333211  11111111 123446667776443322333444444433 55544 34


Q ss_pred             C-CccHHHHHHHhcCC-CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe----CCCCCCceec
Q 009759          358 D-GPYREELEKMFTGM-PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV----RAGGIPDIIP  431 (526)
Q Consensus       358 ~-g~~~~~l~~l~~~~-~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~----~~gg~~e~v~  431 (526)
                      + .+..+.+++..+.. ++.++-..  ++++++|..||+.|.     .-|.++.||+..|+|.++-    +.-..+..+.
T Consensus       194 s~~p~l~~l~k~~~~~~~i~~~~~~--~dma~LMke~d~aI~-----AaGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~  266 (318)
T COG3980         194 SSNPTLKNLRKRAEKYPNINLYIDT--NDMAELMKEADLAIS-----AAGSTLYEALLLGVPSLVLPLAENQIATAKEFE  266 (318)
T ss_pred             CCCcchhHHHHHHhhCCCeeeEecc--hhHHHHHHhcchhee-----ccchHHHHHHHhcCCceEEeeeccHHHHHHHHH
Confidence            3 35556666666654 67776555  799999999999984     3488999999999994332    2112222220


Q ss_pred             cc-CCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHH
Q 009759          432 ED-QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAAR  472 (526)
Q Consensus       432 ~~-~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~  472 (526)
                      .. .....|+.   .........+.++..|+..++.+....+
T Consensus       267 ~lg~~~~l~~~---l~~~~~~~~~~~i~~d~~~rk~l~~~~~  305 (318)
T COG3980         267 ALGIIKQLGYH---LKDLAKDYEILQIQKDYARRKNLSFGSK  305 (318)
T ss_pred             hcCchhhccCC---CchHHHHHHHHHhhhCHHHhhhhhhccc
Confidence            00 00122222   2456777778888888887776655443

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=98.85  E-value=1.9e-05  Score=79.66  Aligned_cols=321  Identities=11%  Similarity=0.075  Sum_probs=175.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCC--CeEEEEEeCCCCCccccCceeccccccCC--C-------------
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMG--DEVMVVTTHEGVPQEFYGAKLIGSRSFPC--P-------------  181 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~~--~-------------  181 (526)
                      |||++...+ . ...-|.+..+..+++.|++..  .+++|++..+.......+..+.+...+-.  .             
T Consensus         1 ~~i~i~G~~-g-~~N~GdeAil~~ii~~l~~~~p~~~i~v~S~~P~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~   78 (426)
T PRK10017          1 MKLLILGNH-T-CGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKK   78 (426)
T ss_pred             CeEEEEccc-c-CCCccHHHHHHHHHHHHHhhCCCCeEEEEecCccchhhhcccccccchhhhhhhhcccccccchhHHH
Confidence            799887653 2 456788999999999999985  67888887665433222211111111000  0             


Q ss_pred             -----c----------cccccchhc---ccHHHHHHHHhcCCCEEEECCCchH-------HHHHHHHHHhcCCCEEEEEe
Q 009759          182 -----W----------YQKVPLSLA---LSPRIISEVARFKPDIIHASSPGIM-------VFGALIIAKLLCVPIVMSYH  236 (526)
Q Consensus       182 -----~----------~~~~~~~~~---~~~~l~~~l~~~~pDiV~~~~~~~~-------~~~~~~~~~~~~~p~v~~~h  236 (526)
                           +          ..+....+.   ....+.+.++  +.|+++..+...+       .+...++++..|+|+++.-+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~gkpv~l~gq  156 (426)
T PRK10017         79 VLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLS--GYDAIIQVGGSFFVDLYGVPQFEHALCAFMAKKPLYMIGH  156 (426)
T ss_pred             HHHhhhhHHHHHhhhccccccccccchhhHHHHHHHHH--hCCEEEECCCCccccCcccHHHHHHHHHHHcCCCEEEECC
Confidence                 0          000001111   1223344454  6799888543221       12224567888999999888


Q ss_pred             cCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccH-----H
Q 009759          237 THVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS-----E  311 (526)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~-----~  311 (526)
                      +..|..         ....+.+.+..++++|.|.+=.+...+.+++.+. ...++.+.+   |+.+.-+....+     .
T Consensus       157 siGPf~---------~~~~r~l~r~vl~~~~~ItvRD~~S~~~Lk~lGv-~~~~v~~~a---DpAF~L~~~~~~~~~~~~  223 (426)
T PRK10017        157 SVGPFQ---------DEQFNQLANYVFGHCDALILRESVSLDLMKRSNI-TTAKVEHGV---DTAWLVDHHTEDFTASYA  223 (426)
T ss_pred             cCCCcC---------CHHHHHHHHHHHhcCCEEEEccHHHHHHHHHhCC-CccceEEec---ChhhhCCccccccccchh
Confidence            876543         2223467788899999999988888888888764 445666654   333222211100     0


Q ss_pred             HHHhhcCCCCCCcEEEEE-eccccc-c--------cHHHHHHHHHhC--CCcEEEEEeC-------Cc-cHH---HHHHH
Q 009759          312 MRWRLSNGEPDKPLIVHV-GRLGVE-K--------SLDFLKRVMDRL--PEARIAFIGD-------GP-YRE---ELEKM  368 (526)
Q Consensus       312 ~~~~~~~~~~~~~~i~~v-G~l~~~-K--------g~~~li~a~~~l--~~~~l~ivG~-------g~-~~~---~l~~l  368 (526)
                      ....+.. ..++++|++. ..+.+. +        -...+.+++..+  .+.+++++..       ++ +..   .+.+.
T Consensus       224 ~~~~~~~-~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~  302 (426)
T PRK10017        224 VQHWLDV-AAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQH  302 (426)
T ss_pred             hhhhhcc-cccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHh
Confidence            1111111 1233455443 333211 1        123344444444  3566655542       12 222   22233


Q ss_pred             hcCC-CeE-EecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC----CCCceecccCCCceeEee
Q 009759          369 FTGM-PAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLF  442 (526)
Q Consensus       369 ~~~~-~V~-~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g----g~~e~v~~~~~~~~g~~~  442 (526)
                      .... +++ +....+..++..++++||++|..-.     -.++=|++.|+|+|+-...    ++-+.+     |...+++
T Consensus       303 ~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-----g~~~~~~  372 (426)
T PRK10017        303 VSDPARYHVVMDELNDLEMGKILGACELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-----GLPEMAI  372 (426)
T ss_pred             cccccceeEecCCCChHHHHHHHhhCCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc-----CCccEEe
Confidence            2222 233 3344455688899999999984332     2566799999999987543    222223     2222322


Q ss_pred             --CCCCHHHHHHHHHHhhhCHHHHHHH
Q 009759          443 --NPGDLDDCLSKLEPLLYNQELRETM  467 (526)
Q Consensus       443 --~~~d~~~la~ai~~ll~d~~~~~~~  467 (526)
                        ..-+.+++.+.+.+++++.+..++.
T Consensus       373 ~~~~l~~~~Li~~v~~~~~~r~~~~~~  399 (426)
T PRK10017        373 DIRHLLDGSLQAMVADTLGQLPALNAR  399 (426)
T ss_pred             chhhCCHHHHHHHHHHHHhCHHHHHHH
Confidence              3446789999999999987654443

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=98.83  E-value=2.2e-06  Score=85.56  Aligned_cols=346  Identities=12%  Similarity=0.084  Sum_probs=196.4

Q ss_pred             CCCCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcccc-CceeccccccCCCccccccchhc
Q 009759          113 ENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFY-GAKLIGSRSFPCPWYQKVPLSLA  191 (526)
Q Consensus       113 ~~~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  191 (526)
                      +...++.||.++++.   ......+..+..+.+.+-+.-++|..+..+.......+ .+...-...++..        ..
T Consensus       254 ~~~~~rlRvGylS~d---lr~Havg~l~~~v~e~hDRdkfEvfay~~g~~~~dal~~rI~a~~~~~~~~~--------~~  322 (620)
T COG3914         254 KRNGKRLRVGYLSSD---LRSHAVGFLLRWVFEYHDRDKFEVFAYSLGPPHTDALQERISAAVEKWYPIG--------RM  322 (620)
T ss_pred             cccccceeEEEeccc---cccchHHHHHHHHHHHhchhheEEEEEecCCCCchhHHHHHHHhhhheeccC--------Cc
Confidence            345677899999875   23345556677777777777788888877633222111 0000000111111        01


Q ss_pred             ccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEe
Q 009759          192 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  271 (526)
Q Consensus       192 ~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  271 (526)
                      -...+...|+.-..||.+--+........-+ ....-.|+.+++-+.......... .             +--+|.++.
T Consensus       323 dd~e~a~~I~~d~IdILvDl~g~T~d~r~~v-~A~RpAPiqvswlGy~aT~g~p~~-D-------------Y~I~D~y~v  387 (620)
T COG3914         323 DDAEIANAIRTDGIDILVDLDGHTVDTRCQV-FAHRPAPIQVSWLGYPATTGSPNM-D-------------YFISDPYTV  387 (620)
T ss_pred             CHHHHHHHHHhcCCeEEEeccCceeccchhh-hhcCCCceEEeecccccccCCCcc-e-------------EEeeCceec
Confidence            1235666677778998876543222211222 234457888877665432211110 0             112455555


Q ss_pred             CChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEeccccc--ccHHHHHHHHHhCC
Q 009759          272 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE--KSLDFLKRVMDRLP  349 (526)
Q Consensus       272 ~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~--Kg~~~li~a~~~l~  349 (526)
                      + +...+++.+...    ++--.+-++|-  +.+.... --|..+++ +++..+++++++..+.  .-++.-.++++..|
T Consensus       388 P-p~ae~yysEkl~----RLp~cy~p~d~--~~~v~p~-~sR~~lgl-p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP  458 (620)
T COG3914         388 P-PTAEEYYSEKLW----RLPQCYQPVDG--FEPVTPP-PSRAQLGL-PEDAVVFCCFNNYFKITPEVFALWMQILSAVP  458 (620)
T ss_pred             C-chHHHHHHHHHH----hcccccCCCCC--cccCCCC-cchhhcCC-CCCeEEEEecCCcccCCHHHHHHHHHHHHhCC
Confidence            5 555555554432    22112222332  2222111 22334443 4455555555554322  12455567778889


Q ss_pred             CcEEEEEeCCcc---HHHHHHHhcCC-----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          350 EARIAFIGDGPY---REELEKMFTGM-----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       350 ~~~l~ivG~g~~---~~~l~~l~~~~-----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                      +-.|.+.|.|+.   ...+++++++.     +.+|.+..+.++..+.|.-||+++=+.-+. ...+.+|++.+|+|||+-
T Consensus       459 ~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADlvLDTyPY~-g~TTa~daLwm~vPVlT~  537 (620)
T COG3914         459 NSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGIADLVLDTYPYG-GHTTASDALWMGVPVLTR  537 (620)
T ss_pred             CcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhchhheeeecccCC-CccchHHHHHhcCceeee
Confidence            999999987643   34556666544     589999999999999999999999554433 346889999999999975


Q ss_pred             CCCCCC-----ceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHHH
Q 009759          422 RAGGIP-----DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME---KYDWRAATRTIRNEQYN  493 (526)
Q Consensus       422 ~~gg~~-----e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~---~fs~~~~~~~~~~~ly~  493 (526)
                      .-..+.     .++.  .-|..-+++.  +.++..+.-..+-.|...+++.+..-.+..+   -|+.+..++++. .+|.
T Consensus       538 ~G~~FasR~~~si~~--~agi~e~vA~--s~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le-~~y~  612 (620)
T COG3914         538 VGEQFASRNGASIAT--NAGIPELVAD--SRADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLE-TLYW  612 (620)
T ss_pred             ccHHHHHhhhHHHHH--hcCCchhhcC--CHHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHH-HHHH
Confidence            321110     1110  1122223344  6677777766777788777776655444443   399999999996 8999


Q ss_pred             HHHHHH
Q 009759          494 AAIWFW  499 (526)
Q Consensus       494 ~~l~~~  499 (526)
                      ++.+.+
T Consensus       613 ~M~~~y  618 (620)
T COG3914         613 GMWSEY  618 (620)
T ss_pred             HHHHhh
Confidence            887654

>PLN03007 UDP-glucosyltransferase family protein

Probab=98.77  E-value=2.7e-05  Score=80.54  Aligned_cols=133  Identities=12%  Similarity=0.118  Sum_probs=80.4

Q ss_pred             CCCcEEEEEecccc--cccHHHHHHHHHhCCCcEEE-EEeCC--------ccHHHHHHHhcCCCeEEecccChhhHHHHH
Q 009759          321 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIA-FIGDG--------PYREELEKMFTGMPAVFTGMLLGEELSQAY  389 (526)
Q Consensus       321 ~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~-ivG~g--------~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~  389 (526)
                      ++..+++..|+...  .+.+..+.++++..+ ..|+ .++..        ...+.+.+.....++.+.+|+|+.   +++
T Consensus       284 ~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~---~iL  359 (482)
T PLN03007        284 PDSVIYLSFGSVASFKNEQLFEIAAGLEGSG-QNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQV---LIL  359 (482)
T ss_pred             CCceEEEeecCCcCCCHHHHHHHHHHHHHCC-CCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHH---HHh
Confidence            34566778887643  445667777777774 3443 34421        112234444445589999999865   457


Q ss_pred             HcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCCCceeEee----------CCCCHHHHHHHHH
Q 009759          390 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLF----------NPGDLDDCLSKLE  455 (526)
Q Consensus       390 ~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~~~~g~~~----------~~~d~~~la~ai~  455 (526)
                      ..+++..+-  ..+.-++++||+++|+|+|+....+-    ...+.  +.-+.|+-+          ..-+.++++++|.
T Consensus       360 ~h~~v~~fv--tH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~--~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~  435 (482)
T PLN03007        360 DHQATGGFV--THCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVT--QVLRTGVSVGAKKLVKVKGDFISREKVEKAVR  435 (482)
T ss_pred             ccCccceee--ecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHH--HhhcceeEeccccccccccCcccHHHHHHHHH
Confidence            777663322  23345689999999999999876432    11110  001222221          1237899999999


Q ss_pred             HhhhCH
Q 009759          456 PLLYNQ  461 (526)
Q Consensus       456 ~ll~d~  461 (526)
                      +++.++
T Consensus       436 ~~m~~~  441 (482)
T PLN03007        436 EVIVGE  441 (482)
T ss_pred             HHhcCc
Confidence            999875

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=98.69  E-value=1.2e-06  Score=85.64  Aligned_cols=248  Identities=12%  Similarity=0.073  Sum_probs=136.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCc----cccccchhcccH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPW----YQKVPLSLALSP  194 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  194 (526)
                      |||.+++..      -.+..+...|+++|++   ++.++.-+....  .  ........+..-.    ...++.......
T Consensus         2 ~~i~i~aGE------~SGD~~ga~l~~~l~~---~~~~~G~GG~~m--~--~~~~~~~~lsv~G~~evl~~~~~~~~~~~   68 (347)
T PRK14089          2 MKILVSALE------PSANLHLKELLKNLPK---DYELIGIFDKSL--G--NPLYDSREFSIMGFVDVLPKLFFAKKAIK   68 (347)
T ss_pred             cEEEEEecc------ccHHHHHHHHHHHHhc---CCEEEEEechHH--H--HhcCChHHhhhhhHHHHHHHHHHHHHHHH
Confidence            688777542      1345667889999987   666666554322  0  0000111111000    011111122223


Q ss_pred             HHHHHHHhcCCCEEEECCCchHHHHHHHHHHhc--CCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeC
Q 009759          195 RIISEVARFKPDIIHASSPGIMVFGALIIAKLL--CVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  272 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  272 (526)
                      .+.+..  .+||+++.-+...+.+.....++..  ++|+++++--   +.     +.|..    ...+.+.+.+|.+++.
T Consensus        69 ~~~~~~--~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~P---qv-----WAWr~----~R~~~i~k~~d~vl~i  134 (347)
T PRK14089         69 EMVELA--KQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYILP---QV-----WAWKK----GRAKILEKYCDFLASI  134 (347)
T ss_pred             HHHHHh--cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECc---cc-----eeeCc----chHHHHHHHHhhhhcc
Confidence            333332  5999999877544433333334445  7998876542   11     11111    1245667788998887


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccc--cccHHHHHHHHHhCCC
Q 009759          273 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPE  350 (526)
Q Consensus       273 S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~  350 (526)
                      =+...+.+    +   .++.++.|++-.. ....      +..  . .+++.+.++-|+-..  .+.+..+++++.++.+
T Consensus       135 fPFE~~~y----g---~~~~~VGhPl~d~-~~~~------~~~--~-~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~  197 (347)
T PRK14089        135 LPFEVQFY----Q---SKATYVGHPLLDE-IKEF------KKD--L-DKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEG  197 (347)
T ss_pred             CCCCHHHh----C---CCCEEECCcHHHh-hhhh------hhh--c-CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhh
Confidence            77777766    2   3556777765322 1110      001  1 223334455554321  2445666788877743


Q ss_pred             --cEEEEEeCCccHHHHHHHhcCC-CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          351 --ARIAFIGDGPYREELEKMFTGM-PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       351 --~~l~ivG~g~~~~~l~~l~~~~-~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                        ..+++.|... .+.+++...+. .+.+.     ++..++|+.||+++..|     |.+.+|++.+|+|.|..
T Consensus       198 ~~~~~~i~~a~~-~~~i~~~~~~~~~~~~~-----~~~~~~m~~aDlal~~S-----GT~TLE~al~g~P~Vv~  260 (347)
T PRK14089        198 KEKILVVPSFFK-GKDLKEIYGDISEFEIS-----YDTHKALLEAEFAFICS-----GTATLEAALIGTPFVLA  260 (347)
T ss_pred             cCcEEEEeCCCc-HHHHHHHHhcCCCcEEe-----ccHHHHHHhhhHHHhcC-----cHHHHHHHHhCCCEEEE
Confidence              6777777643 35555554432 34433     25678999999999666     78888999999998864

>PLN02448 UDP-glycosyltransferase family protein

Probab=98.64  E-value=0.00013  Score=75.02  Aligned_cols=337  Identities=14%  Similarity=0.101  Sum_probs=168.3

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHC--CCeEEEEEeCCCCC--ccc---cCceeccccc-cCCCcccc--
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM--GDEVMVVTTHEGVP--QEF---YGAKLIGSRS-FPCPWYQK--  185 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~--~~~---~~~~~~~~~~-~~~~~~~~--  185 (526)
                      ..+.+|+++.    ++. -|+-.-+.+|++.|..+  |+.|+++++.....  ...   .++....+.. .+......  
T Consensus         8 ~~~~hVvlvp----~pa-~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~~~gi~fv~lp~~~p~~~~~~~~   82 (459)
T PLN02448          8 TTSCHVVAMP----YPG-RGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIPNVIPSELVRAAD   82 (459)
T ss_pred             CCCcEEEEEC----Ccc-cccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCCCCCEEEEECCCCCCCccccccC
Confidence            4456888884    232 57788899999999999  99999999765311  000   1222222221 01000000  


Q ss_pred             ccchh-----cccHHHHHHHHhc--CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecC---------C---------c
Q 009759          186 VPLSL-----ALSPRIISEVARF--KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTH---------V---------P  240 (526)
Q Consensus       186 ~~~~~-----~~~~~l~~~l~~~--~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~---------~---------~  240 (526)
                      ....+     .....+.+++++.  .+|+|+.....   ..+..+++..|+|.+......         .         +
T Consensus        83 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~---~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~  159 (459)
T PLN02448         83 FPGFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYL---FWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFP  159 (459)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCcc---HHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCC
Confidence            00000     1112333444432  46888776432   234557788899976543221         0         0


Q ss_pred             cc-----------cccc-------ccccccch----HHHHHHHH--hhcCcEEEeCChhHH-HHHHHhccc-CCCcEEEe
Q 009759          241 VY-----------IPRY-------TFSWLVKP----MWLVIKFL--HRAADLTLVPSVAIG-KDLEAARVT-AANKIRIW  294 (526)
Q Consensus       241 ~~-----------~~~~-------~~~~~~~~----~~~~~~~~--~~~ad~ii~~S~~~~-~~l~~~~~~-~~~ki~vi  294 (526)
                      ..           .+..       ........    ...+...+  ...++.|++.|-... ..+.+.... ...++..|
T Consensus       160 ~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~i  239 (459)
T PLN02448        160 VELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPI  239 (459)
T ss_pred             CccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEe
Confidence            00           0000       00000000    11111111  345688998887622 222222210 01244444


Q ss_pred             ecCCCCCCCC------CCc-ccHHHHHhhcCCCCCCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEEeCCccHHHH
Q 009759          295 KKGVDSESFH------PRF-RSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGPYREEL  365 (526)
Q Consensus       295 ~ngid~~~~~------~~~-~~~~~~~~~~~~~~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l  365 (526)
                      ...+......      +.. ...+...-+........+++..|+...  ..-+..++++++.. +..|+++..++ ...+
T Consensus       240 GP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-~~~~lw~~~~~-~~~~  317 (459)
T PLN02448        240 GPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDS-GVRFLWVARGE-ASRL  317 (459)
T ss_pred             cCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhC-CCCEEEEEcCc-hhhH
Confidence            4432210000      000 001222222222234456777887632  23467777888776 56777655432 2223


Q ss_pred             HHHhcCCCeEEecccChhhHHHHHHcCcE--EEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCC-Cce
Q 009759          366 EKMFTGMPAVFTGMLLGEELSQAYASGDV--FVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQD-GKI  438 (526)
Q Consensus       366 ~~l~~~~~V~~~g~v~~~~l~~~~~~aDv--~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~-~~~  438 (526)
                      .+... .++.+.+|+|+.++   +...++  +|    ..+.-++++||+++|+|+|+....+-    ...+   .+ -+.
T Consensus       318 ~~~~~-~~~~v~~w~pQ~~i---L~h~~v~~fv----tHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v---~~~~g~  386 (459)
T PLN02448        318 KEICG-DMGLVVPWCDQLKV---LCHSSVGGFW----THCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLI---VEDWKI  386 (459)
T ss_pred             hHhcc-CCEEEeccCCHHHH---hccCccceEE----ecCchhHHHHHHHcCCCEEeccccccchhhHHHH---HHHhCc
Confidence            33332 36778899987664   555665  55    33445799999999999999876532    2222   22 134


Q ss_pred             eEeeC-------CCCHHHHHHHHHHhhhCH-HHHHHHHHHHHH
Q 009759          439 GYLFN-------PGDLDDCLSKLEPLLYNQ-ELRETMGQAARQ  473 (526)
Q Consensus       439 g~~~~-------~~d~~~la~ai~~ll~d~-~~~~~~~~~a~~  473 (526)
                      |+-+.       ..+.+++++++.+++.++ +..+++++++.+
T Consensus       387 G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~  429 (459)
T PLN02448        387 GWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKE  429 (459)
T ss_pred             eEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence            54442       237899999999999864 333444444443

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=98.64  E-value=2.5e-06  Score=85.70  Aligned_cols=270  Identities=12%  Similarity=0.074  Sum_probs=128.1

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccc-cccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHH
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI-PRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEA  282 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~  282 (526)
                      +.++++.......   ........+.++|...|+. +.-. +.......  .............|.+++.|+...+.+.+
T Consensus        78 ~Ak~~i~~~~~~~---~~~~~~~~~~~~i~lwHG~-~~K~~g~~~~~~~--~~~~~~~~~~~~~d~~~~~s~~~~~~~~~  151 (369)
T PF04464_consen   78 RAKYIISDSYFPD---LIYFKKRKNQKYIQLWHGI-PLKKIGYDSPDNK--NYRKNYKRNYRNYDYFIVSSEFEKEIFKK  151 (369)
T ss_dssp             HEEEEEESS---T-----TS---TTSEEEE--SS---SB--GGG-S-----TS-HHHHHHHTT-SEEEESSHHHHHHHHH
T ss_pred             hCcEEEECCCCCc---ccccccCCCcEEEEecCCC-cccccchhccccc--cchhhhhhhccCCcEEEECCHHHHHHHHH
Confidence            4677777742111   0122345678899999997 3211 11100000  00013455678899999999999999999


Q ss_pred             hcccCCCcEEEeecCCCCCCCCCCcc-cHHHHHhhcCCCCCCcEEEEEecccccccH------------HHHHHHHHhCC
Q 009759          283 ARVTAANKIRIWKKGVDSESFHPRFR-SSEMRWRLSNGEPDKPLIVHVGRLGVEKSL------------DFLKRVMDRLP  349 (526)
Q Consensus       283 ~~~~~~~ki~vi~ngid~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~------------~~li~a~~~l~  349 (526)
                      .++.+.+++.+...+-....+..... ...+...++. ..++.+|+|+-++......            +.+.  ...-.
T Consensus       152 ~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~-~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~--~~~~~  228 (369)
T PF04464_consen  152 AFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKKLGI-DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLN--FLLKN  228 (369)
T ss_dssp             HTT--GGGEEES--GGGHHHHHSTT-HHHHHHHHTT---SS-EEEEEE----GGG--GGSS----TT-HHHHH--HHHTT
T ss_pred             HhccCcceEEEeCCCeEhHHhccCHHHHHHHHHHhcc-CCCCcEEEEeeccccccccccccccccccCHHHHH--HHhCC
Confidence            88766666665543322222222211 2344445544 4566689998766433222            2222  22225


Q ss_pred             CcEEEEEeCCccHHHHHHHh-cCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe--CCCCC
Q 009759          350 EARIAFIGDGPYREELEKMF-TGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV--RAGGI  426 (526)
Q Consensus       350 ~~~l~ivG~g~~~~~l~~l~-~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~--~~gg~  426 (526)
                      ++.+++-............. ...+|.+...-  +++.+++..||++|     .-++..++|++.+|+|||-.  |....
T Consensus       229 ~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~~~--~~~~~ll~~aDiLI-----TDySSi~fD~~~l~KPiify~~D~~~Y  301 (369)
T PF04464_consen  229 NYVLIIKPHPNMKKKFKDFKEDNSNIIFVSDN--EDIYDLLAAADILI-----TDYSSIIFDFLLLNKPIIFYQPDLEEY  301 (369)
T ss_dssp             TEEEEE--SHHHHTT----TT-TTTEEE-TT---S-HHHHHHT-SEEE-----ESS-THHHHHGGGT--EEEE-TTTTTT
T ss_pred             CcEEEEEeCchhhhchhhhhccCCcEEECCCC--CCHHHHHHhcCEEE-----EechhHHHHHHHhCCCEEEEeccHHHH
Confidence            77777766432222222211 12256654433  58999999999999     44577999999999999954  33211


Q ss_pred             ---CceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 009759          427 ---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQ  491 (526)
Q Consensus       427 ---~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~l  491 (526)
                         +.+..+.++...|-++.  +.++|.++|..++.++...++..+...+..-.|.-.+..+++.+.+
T Consensus       302 ~~~rg~~~~~~~~~pg~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I  367 (369)
T PF04464_consen  302 EKERGFYFDYEEDLPGPIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI  367 (369)
T ss_dssp             TTTSSBSS-TTTSSSS-EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred             hhccCCCCchHhhCCCceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence               11111112334455665  8999999999998876654443333333332344445565555443

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>PLN02208 glycosyltransferase family protein

Probab=98.64  E-value=0.00019  Score=73.08  Aligned_cols=339  Identities=13%  Similarity=0.097  Sum_probs=168.7

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc-----c-cCceecccc-----ccCCCccc--
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE-----F-YGAKLIGSR-----SFPCPWYQ--  184 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~-----~-~~~~~~~~~-----~~~~~~~~--  184 (526)
                      +++|+++    ||+. -|+-.-+.++++.|+.+|++|+++++......-     . ..+......     .++.....  
T Consensus         4 ~~hvv~~----P~pa-qGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp~g~~~~~   78 (442)
T PLN02208          4 KFHAFMF----PWFA-FGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLPAGAETTS   78 (442)
T ss_pred             CCEEEEe----cCcc-ccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCCCCccccc
Confidence            4577777    3333 588889999999999999999999965321110     0 011111110     01110000  


Q ss_pred             cccch---------hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEec-------------CCccc
Q 009759          185 KVPLS---------LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHT-------------HVPVY  242 (526)
Q Consensus       185 ~~~~~---------~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~-------------~~~~~  242 (526)
                      .....         ......+.+++++..+|+|++..   ..+ +..+++..|+|.++..-.             .....
T Consensus        79 ~l~~~l~~~~~~~~~~~~~~l~~~L~~~~~~cVV~D~---~~w-a~~vA~e~giP~~~f~~~~a~~~~~~~~~~~~~~~~  154 (442)
T PLN02208         79 DIPISMDNLLSEALDLTRDQVEAAVRALRPDLIFFDF---AQW-IPEMAKEHMIKSVSYIIVSATTIAHTHVPGGKLGVP  154 (442)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEECC---cHh-HHHHHHHhCCCEEEEEhhhHHHHHHHccCccccCCC
Confidence            00000         11223455566667889888873   223 355678889997643211             10000


Q ss_pred             ccccc-------cc----c--ccchHHHHH---HHHhhcCcEEEeCChhHHH-HHHHhcccC-CCcEEEeecCCCCCCCC
Q 009759          243 IPRYT-------FS----W--LVKPMWLVI---KFLHRAADLTLVPSVAIGK-DLEAARVTA-ANKIRIWKKGVDSESFH  304 (526)
Q Consensus       243 ~~~~~-------~~----~--~~~~~~~~~---~~~~~~ad~ii~~S~~~~~-~l~~~~~~~-~~ki~vi~ngid~~~~~  304 (526)
                      .+...       ..    .  .........   ...+..+|.+++.|-...+ .+.+....+ ..++..|..-..... .
T Consensus       155 ~pglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~-~  233 (442)
T PLN02208        155 PPGYPSSKVLFRENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD-T  233 (442)
T ss_pred             CCCCCCcccccCHHHcCcccccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC-C
Confidence            00000       00    0  000011111   1245678999998865443 222222111 135555543321110 0


Q ss_pred             CCcccHHHHHhhcCCCCCCcEEEEEecccc--cccHHHH-HHH-HHhCCCcEEEEEeC-C------ccHHHHHHHhcCCC
Q 009759          305 PRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFL-KRV-MDRLPEARIAFIGD-G------PYREELEKMFTGMP  373 (526)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~--~Kg~~~l-i~a-~~~l~~~~l~ivG~-g------~~~~~l~~l~~~~~  373 (526)
                      ......+...-+....++..+++.+|+...  .+.+..+ ..+ +..+| +.+++--. +      ...+.+.+..++.|
T Consensus       234 ~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~p-f~wv~r~~~~~~~~~~~lp~~f~~r~~~~g  312 (442)
T PLN02208        234 SKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLP-FLIAVKPPRGSSTVQEGLPEGFEERVKGRG  312 (442)
T ss_pred             CCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCc-EEEEEeCCCcccchhhhCCHHHHHHHhcCC
Confidence            011122333333222334566777887743  1212222 222 33333 33333211 1      12234444455568


Q ss_pred             eEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCCCceeEeeCC-----
Q 009759          374 AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFNP-----  444 (526)
Q Consensus       374 V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~~~~g~~~~~-----  444 (526)
                      +.+.+|+|+.++   ++...+..+-+  .+.-++++||+++|+|+|+....+-    ...+.  +.-+.|+.+..     
T Consensus       313 ~~v~~W~PQ~~i---L~H~~v~~Fvt--HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~--~~~g~gv~~~~~~~~~  385 (442)
T PLN02208        313 VVWGGWVQQPLI---LDHPSIGCFVN--HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMT--EEFEVSVEVSREKTGW  385 (442)
T ss_pred             cEeeccCCHHHH---hcCCccCeEEc--cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHH--HHhceeEEeccccCCc
Confidence            888899987764   55565533222  3344689999999999999876432    22220  22345655532     


Q ss_pred             CCHHHHHHHHHHhhhCH-HHHHHHHHHHHHH
Q 009759          445 GDLDDCLSKLEPLLYNQ-ELRETMGQAARQE  474 (526)
Q Consensus       445 ~d~~~la~ai~~ll~d~-~~~~~~~~~a~~~  474 (526)
                      -+.++++++|.+++.++ +..+++.+++++.
T Consensus       386 ~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~  416 (442)
T PLN02208        386 FSKESLSNAIKSVMDKDSDLGKLVRSNHTKL  416 (442)
T ss_pred             CcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence            37889999999999765 4456666665554

>PLN02670 transferase, transferring glycosyl groups

Probab=98.63  E-value=0.00014  Score=74.46  Aligned_cols=163  Identities=10%  Similarity=0.074  Sum_probs=97.5

Q ss_pred             CCCcEEEEEeccc--ccccHHHHHHHHHhCCCcEEEEE-eC--C-------ccHHHHHHHhcCCCeEEecccChhhHHHH
Q 009759          321 PDKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFI-GD--G-------PYREELEKMFTGMPAVFTGMLLGEELSQA  388 (526)
Q Consensus       321 ~~~~~i~~vG~l~--~~Kg~~~li~a~~~l~~~~l~iv-G~--g-------~~~~~l~~l~~~~~V~~~g~v~~~~l~~~  388 (526)
                      ++..+.+.+|++.  ...-+..+..+++..+. .|+.+ ..  +       ...+.+.+..++.++.+.+|+|+.++   
T Consensus       277 ~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~-~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~I---  352 (472)
T PLN02670        277 VNSVVYVALGTEASLRREEVTELALGLEKSET-PFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKI---  352 (472)
T ss_pred             CCceEEEEecccccCCHHHHHHHHHHHHHCCC-CEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHH---
Confidence            3456667778763  33457778888888865 44433 21  1       01123334444456888899987664   


Q ss_pred             HHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCC------CCHHHHHHHHHHhh
Q 009759          389 YASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP------GDLDDCLSKLEPLL  458 (526)
Q Consensus       389 ~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~------~d~~~la~ai~~ll  458 (526)
                      ++...+..+-  ..+.-++++||+++|+|+|+....+    ....+   +..+.|+.+..      -+.+++.++|.+++
T Consensus       353 L~H~~v~~Fv--tHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v---~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm  427 (472)
T PLN02670        353 LSHESVGGFL--THCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLL---HGKKLGLEVPRDERDGSFTSDSVAESVRLAM  427 (472)
T ss_pred             hcCcccceee--ecCCcchHHHHHHcCCCEEeCcchhccHHHHHHH---HHcCeeEEeeccccCCcCcHHHHHHHHHHHh
Confidence            5555552222  2344568999999999999987643    22233   33456666532      36899999999999


Q ss_pred             hCHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHH
Q 009759          459 YNQELRETMGQAARQEME----KYDWRAATRTIRNEQYN  493 (526)
Q Consensus       459 ~d~~~~~~~~~~a~~~~~----~fs~~~~~~~~~~~ly~  493 (526)
                      .+++ -+++++++++..+    +=..+.+++.+++.+|+
T Consensus       428 ~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~  465 (472)
T PLN02670        428 VDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRE  465 (472)
T ss_pred             cCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHH
Confidence            7742 2234444444433    44556666666544443

>PLN02764 glycosyltransferase family protein

Probab=98.62  E-value=0.00018  Score=72.98  Aligned_cols=343  Identities=15%  Similarity=0.097  Sum_probs=170.9

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc--cccCce-eccccccCCCccccc------
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ--EFYGAK-LIGSRSFPCPWYQKV------  186 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~------  186 (526)
                      +.+++|+++    |++. -|+-.-+.+|++.|+.+|+.|+++++......  ...... .+.+...+++....+      
T Consensus         3 ~~~~Hvvl~----P~pa-qGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~g~e~   77 (453)
T PLN02764          3 GLKFHVLMY----PWFA-TGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPVGTET   77 (453)
T ss_pred             CCCcEEEEE----CCcc-cccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCCcccc
Confidence            345788777    3343 48888999999999999999999987653210  000000 001111111100000      


Q ss_pred             ----cch----h-----cccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEec-------------C--
Q 009759          187 ----PLS----L-----ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHT-------------H--  238 (526)
Q Consensus       187 ----~~~----~-----~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~-------------~--  238 (526)
                          ...    +     .....+.+++++..+|.|++..   .. .+.-.++..|+|.++..-.             .  
T Consensus        78 ~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~iV~D~---~~-w~~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~  153 (453)
T PLN02764         78 VSEIPVTSADLLMSAMDLTRDQVEVVVRAVEPDLIFFDF---AH-WIPEVARDFGLKTVKYVVVSASTIASMLVPGGELG  153 (453)
T ss_pred             cccCChhHHHHHHHHHHHhHHHHHHHHHhCCCCEEEECC---ch-hHHHHHHHhCCCEEEEEcHHHHHHHHHhcccccCC
Confidence                100    0     1112345556655788887763   22 2455678888986653211             1  


Q ss_pred             --Ccccc------ccc-cccccc--c-----hHHHHHH---HHhhcCcEEEeCChhHHH-HHHHhcccC-CCcEEEeecC
Q 009759          239 --VPVYI------PRY-TFSWLV--K-----PMWLVIK---FLHRAADLTLVPSVAIGK-DLEAARVTA-ANKIRIWKKG  297 (526)
Q Consensus       239 --~~~~~------~~~-~~~~~~--~-----~~~~~~~---~~~~~ad~ii~~S~~~~~-~l~~~~~~~-~~ki~vi~ng  297 (526)
                        .+...      +.. ......  .     .......   .....++.|+++|-...+ .+.+..... ..++..|..-
T Consensus       154 ~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL  233 (453)
T PLN02764        154 VPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPV  233 (453)
T ss_pred             CCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccC
Confidence              00000      000 000000  0     0111111   235678889888754333 222222100 1346655443


Q ss_pred             CCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccc--cccHHHHHHHHHhCC-CcEEEEEe-CC------ccHHHHHH
Q 009759          298 VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFLKRVMDRLP-EARIAFIG-DG------PYREELEK  367 (526)
Q Consensus       298 id~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~-~~~l~ivG-~g------~~~~~l~~  367 (526)
                      +.... .........-.-+....++..+.+.+|+...  .+.+..+...++.-. ++..++-- .+      ...+.++.
T Consensus       234 ~~~~~-~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~  312 (453)
T PLN02764        234 FPEPD-KTRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEE  312 (453)
T ss_pred             ccCcc-ccccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHh
Confidence            21110 0000112222223223445566788888733  344444544444331 23333321 11      12223344


Q ss_pred             HhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCCCceeEeeC
Q 009759          368 MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFN  443 (526)
Q Consensus       368 l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~~~~g~~~~  443 (526)
                      ..++.++.+.+|+|+.++... .+++++|    ..+.-++++||+++|+|+|+....+-    ...+.  +.-+.|+-+.
T Consensus       313 r~~grG~v~~~W~PQ~~vL~h-~~v~~Fv----tH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~--~~~g~gv~~~  385 (453)
T PLN02764        313 RVKGRGVVWGGWVQQPLILSH-PSVGCFV----SHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLS--DELKVSVEVA  385 (453)
T ss_pred             hhccCCcEEeCCCCHHHHhcC-cccCeEE----ecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHH--HHhceEEEec
Confidence            444557888899987765332 3345566    34455799999999999999876532    22220  1224455432


Q ss_pred             -----CCCHHHHHHHHHHhhhCH-HHHHHHHHHHHHHH
Q 009759          444 -----PGDLDDCLSKLEPLLYNQ-ELRETMGQAARQEM  475 (526)
Q Consensus       444 -----~~d~~~la~ai~~ll~d~-~~~~~~~~~a~~~~  475 (526)
                           .-+.+++.+++.+++.+. +..+++.+++++.-
T Consensus       386 ~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~  423 (453)
T PLN02764        386 REETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWR  423 (453)
T ss_pred             cccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence                 137899999999999864 44556666655543

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=98.56  E-value=2.4e-06  Score=85.67  Aligned_cols=178  Identities=16%  Similarity=0.223  Sum_probs=112.0

Q ss_pred             HHhhcCCCCCCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEEeCCc-cHHHHHHHhcCC-----CeEEecccChhh
Q 009759          313 RWRLSNGEPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGP-YREELEKMFTGM-----PAVFTGMLLGEE  384 (526)
Q Consensus       313 ~~~~~~~~~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~ivG~g~-~~~~l~~l~~~~-----~V~~~g~v~~~~  384 (526)
                      |..+++ +++.++++++.++.+  ..-++...++++..|+.+|++...+. ..+.+++.+.+.     ++.|.+..+.++
T Consensus       276 R~~~gL-p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~e  354 (468)
T PF13844_consen  276 RAQYGL-PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREE  354 (468)
T ss_dssp             TGGGT---SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHH
T ss_pred             HHHcCC-CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHH
Confidence            444555 456666777776643  23466777888888999998876442 334555555433     588999888888


Q ss_pred             HHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceeccc---CCCceeEeeCCCCHHHHHHHHHHhhhCH
Q 009759          385 LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED---QDGKIGYLFNPGDLDDCLSKLEPLLYNQ  461 (526)
Q Consensus       385 l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~---~~~~~g~~~~~~d~~~la~ai~~ll~d~  461 (526)
                      ....|+.+||++=+.. -+.+.+.+||+.+|+|||+-....+..-+...   .-|-..+++.  |.++..+...++.+|+
T Consensus       355 hl~~~~~~DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~--s~~eYv~~Av~La~D~  431 (468)
T PF13844_consen  355 HLRRYQLADICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD--SEEEYVEIAVRLATDP  431 (468)
T ss_dssp             HHHHGGG-SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S--SHHHHHHHHHHHHH-H
T ss_pred             HHHHhhhCCEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC--CHHHHHHHHHHHhCCH
Confidence            8899999999996643 23467999999999999987543322211000   0122233444  8999999999999999


Q ss_pred             HHHHHHHHHHHHHH-H--hCCHHHHHHHHHHHHHHHH
Q 009759          462 ELRETMGQAARQEM-E--KYDWRAATRTIRNEQYNAA  495 (526)
Q Consensus       462 ~~~~~~~~~a~~~~-~--~fs~~~~~~~~~~~ly~~~  495 (526)
                      +.+++++++.++.. +  -|+....++.++ +.|+++
T Consensus       432 ~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE-~a~~~m  467 (468)
T PF13844_consen  432 ERLRALRAKLRDRRSKSPLFDPKRFARNLE-AAYRQM  467 (468)
T ss_dssp             HHHHHHHHHHHHHHHHSGGG-HHHHHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCCCHHHHHHHHH-HHHHHh
Confidence            99999999988876 3  399999999996 777764

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]

Probab=98.49  E-value=1.9e-07  Score=89.47  Aligned_cols=104  Identities=19%  Similarity=0.252  Sum_probs=72.3

Q ss_pred             hHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceeccc--CCCceeEee-C------CCCHHHHHHHH
Q 009759          384 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED--QDGKIGYLF-N------PGDLDDCLSKL  454 (526)
Q Consensus       384 ~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~--~~~~~g~~~-~------~~d~~~la~ai  454 (526)
                      |..++.+.|++.|+||.+|++|.+..|+-.+|+|-|+|+..|..-+..++  .+...|+.+ +      .++.+++++-+
T Consensus       493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m  572 (692)
T KOG3742|consen  493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFM  572 (692)
T ss_pred             CHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHH
Confidence            56788999999999999999999999999999999999998866554321  223345543 2      23456677666


Q ss_pred             HHhhhCHHHHHHHHH-HHHHHHH-hCCHHHHHHHHH
Q 009759          455 EPLLYNQELRETMGQ-AARQEME-KYDWRAATRTIR  488 (526)
Q Consensus       455 ~~ll~d~~~~~~~~~-~a~~~~~-~fs~~~~~~~~~  488 (526)
                      .+.... ..++++-+ +.-+.+. -.+|..+...|.
T Consensus       573 ~~F~~q-sRRQRIiqRNrtErLSdLLDWk~lG~~Y~  607 (692)
T KOG3742|consen  573 YEFCKQ-SRRQRIIQRNRTERLSDLLDWKYLGRYYR  607 (692)
T ss_pred             HHHHHH-HHHHHHHHhcchhhHHHHHhHHHHhHHHH
Confidence            666543 33444433 3334443 588988877775

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=98.48  E-value=4.9e-05  Score=71.67  Aligned_cols=324  Identities=16%  Similarity=0.104  Sum_probs=174.3

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHC--CCeEEEEEeCCCCCcc--ccCceeccccccCCCc---ccccc
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQE--FYGAKLIGSRSFPCPW---YQKVP  187 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~  187 (526)
                      ..+.|||++.++.   ...=|+-++...+|++|.+.  |.+|.+++........  ..+++.+..+......   +....
T Consensus         6 ~~~~~Ri~~Yshd---~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gVd~V~LPsl~k~~~G~~~~~d   82 (400)
T COG4671           6 ASKRPRILFYSHD---LLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGVDFVKLPSLIKGDNGEYGLVD   82 (400)
T ss_pred             hhccceEEEEehh---hccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccCceEecCceEecCCCceeeee
Confidence            3445699999885   33447889999999999999  9999999876532211  1233333222222111   11000


Q ss_pred             ch-------hcccHHHHHHHHhcCCCEEEECCCchHH----HHHHHHHHhcCCCEEEEEecCCcccccccccccccchHH
Q 009759          188 LS-------LALSPRIISEVARFKPDIIHASSPGIMV----FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMW  256 (526)
Q Consensus       188 ~~-------~~~~~~l~~~l~~~~pDiV~~~~~~~~~----~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~  256 (526)
                      ..       .....-+...++.++|||+++.......    ...+-..+..+.+.+.-..+..... ......|..   .
T Consensus        83 ~~~~l~e~~~~Rs~lil~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~D~p-~~~~~~w~~---~  158 (400)
T COG4671          83 LDGDLEETKKLRSQLILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIRDIP-QELEADWRR---A  158 (400)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhhhch-hhhccchhh---h
Confidence            00       1112245566778999999997643221    1122233444545555444432111 011111111   2


Q ss_pred             HHHHHHhhcCcEEEeCChhHHHHHHHhccc-CCCcEEEeecCCCCC---CCCCCcccHHHHHhhcCCCCCCcEEEEEecc
Q 009759          257 LVIKFLHRAADLTLVPSVAIGKDLEAARVT-AANKIRIWKKGVDSE---SFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL  332 (526)
Q Consensus       257 ~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~-~~~ki~vi~ngid~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l  332 (526)
                      ..++.+-++.|.|++..+-.-..+...+.. +.-+-.+.+.|.=-.   ........         ..++..+++.+|.=
T Consensus       159 ~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~~~---------~pE~~~Ilvs~GGG  229 (400)
T COG4671         159 ETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPPHE---------APEGFDILVSVGGG  229 (400)
T ss_pred             HHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCCcC---------CCccceEEEecCCC
Confidence            446667788899988766544444333321 112222333333211   01111000         13445667777753


Q ss_pred             -cccccHHHHHHHHHhCCCcE---EEEEeCCccHHHHHHHh---cC-CCeEEecccChhhHHHHHHcCcEEEecCCCCCC
Q 009759          333 -GVEKSLDFLKRVMDRLPEAR---IAFIGDGPYREELEKMF---TG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETL  404 (526)
Q Consensus       333 -~~~Kg~~~li~a~~~l~~~~---l~ivG~g~~~~~l~~l~---~~-~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~  404 (526)
                       +-..=++..+.|...+++++   +++.|..-..+...++.   .+ .+|.+..|.  +++..++..|+.+|.-    +.
T Consensus       230 ~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~--~~~~~ll~gA~~vVSm----~G  303 (400)
T COG4671         230 ADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFR--NDFESLLAGARLVVSM----GG  303 (400)
T ss_pred             hhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhh--hhHHHHHHhhheeeec----cc
Confidence             22233555666666666654   55566433333333333   22 379999888  7999999999999933    22


Q ss_pred             cHHHHHHHHcCCcEEEeCCCCCC-c-eeccc---CCCceeEee-CCCCHHHHHHHHHHhhhC
Q 009759          405 GLVVLEAMSSGIPVVGVRAGGIP-D-IIPED---QDGKIGYLF-NPGDLDDCLSKLEPLLYN  460 (526)
Q Consensus       405 ~~~ilEAma~G~PvI~~~~gg~~-e-~v~~~---~~~~~g~~~-~~~d~~~la~ai~~ll~d  460 (526)
                      =+++.|-+++|+|.+.-..+.-. | .+...   +-|-..++. +.-+++.++++|..+++-
T Consensus       304 YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~  365 (400)
T COG4671         304 YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALAR  365 (400)
T ss_pred             chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccC
Confidence            36899999999998876544222 2 22100   112222232 234688999999988873

>PLN02210 UDP-glucosyl transferase

Probab=98.46  E-value=0.0012  Score=67.58  Aligned_cols=352  Identities=11%  Similarity=0.048  Sum_probs=173.4

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHH--HHHCCCeEEEEEeCCCCCccccC----ceeccccccC--CCcc--cc
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKY--LREMGDEVMVVTTHEGVPQEFYG----AKLIGSRSFP--CPWY--QK  185 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~--L~~~G~~V~vi~~~~~~~~~~~~----~~~~~~~~~~--~~~~--~~  185 (526)
                      ..+.+|+++-    ++. -|+-.-+.+|++.  |..+|+.|+++++...... ...    ...+....++  .+..  ..
T Consensus         6 ~~~~hvv~~P----~pa-~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~-~~~~~~~~~~~~~~~~~~glp~~~~~~   79 (456)
T PLN02210          6 GQETHVLMVT----LAF-QGHINPMLKLAKHLSLSSKNLHFTLATTEQARDL-LSTVEKPRRPVDLVFFSDGLPKDDPRA   79 (456)
T ss_pred             CCCCEEEEeC----Ccc-cccHHHHHHHHHHHHhhcCCcEEEEEeccchhhh-hccccCCCCceEEEECCCCCCCCcccC
Confidence            3346887773    333 5888889999999  5699999999997653211 110    0111111111  1100  00


Q ss_pred             ccch-----hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEec----------C------Ccc---
Q 009759          186 VPLS-----LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHT----------H------VPV---  241 (526)
Q Consensus       186 ~~~~-----~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~----------~------~~~---  241 (526)
                      ....     -.....+.+.+.+.++|.|+......   .+..+++..|+|.+...-.          .      .+.   
T Consensus        80 ~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~D~~~~---w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~  156 (456)
T PLN02210         80 PETLLKSLNKVGAKNLSKIIEEKRYSCIISSPFTP---WVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLED  156 (456)
T ss_pred             HHHHHHHHHHhhhHHHHHHHhcCCCcEEEECCcch---hHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcccc
Confidence            0000     01122455566666789887765322   2445678888987543211          0      000   


Q ss_pred             -----cccccc---ccc----cc-c---hHHHHH-H--HHhhcCcEEEeCChhHHHH-HHHhcccCCCcEEEeecCCCCC
Q 009759          242 -----YIPRYT---FSW----LV-K---PMWLVI-K--FLHRAADLTLVPSVAIGKD-LEAARVTAANKIRIWKKGVDSE  301 (526)
Q Consensus       242 -----~~~~~~---~~~----~~-~---~~~~~~-~--~~~~~ad~ii~~S~~~~~~-l~~~~~~~~~ki~vi~ngid~~  301 (526)
                           ..+...   ...    .. .   ...... .  .....++.+++.|-...+. +.+... ...++..|..-+...
T Consensus       157 ~~~~~~~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~-~~~~v~~VGPl~~~~  235 (456)
T PLN02210        157 LNQTVELPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMA-DLKPVIPIGPLVSPF  235 (456)
T ss_pred             cCCeeeCCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHh-hcCCEEEEcccCchh
Confidence                 000000   000    00 0   011111 1  1345678899888654332 211111 112455554433210


Q ss_pred             C--CCCC-----------cccHHHHHhhcCCCCCCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEE-EeCC---ccH
Q 009759          302 S--FHPR-----------FRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAF-IGDG---PYR  362 (526)
Q Consensus       302 ~--~~~~-----------~~~~~~~~~~~~~~~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~i-vG~g---~~~  362 (526)
                      .  ....           ........-+....+...+++..|+...  ..-+..+..+++..+ .+|++ ++..   ...
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~-~~flw~~~~~~~~~~~  314 (456)
T PLN02210        236 LLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRG-VPFLWVIRPKEKAQNV  314 (456)
T ss_pred             hcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCC-CCEEEEEeCCccccch
Confidence            0  0000           0011111122111234456778887643  334667777777764 45444 4421   122


Q ss_pred             HHHHHHhcCCCeEEecccChhhHHHHHHcCc--EEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC----ceecccCC-
Q 009759          363 EELEKMFTGMPAVFTGMLLGEELSQAYASGD--VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP----DIIPEDQD-  435 (526)
Q Consensus       363 ~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aD--v~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~----e~v~~~~~-  435 (526)
                      +.+.+.....+..+.+|+|+.+   +++.++  ++|    ..+.-++++||+++|+|+|+-...+-.    ..+   .+ 
T Consensus       315 ~~~~~~~~~~~g~v~~w~PQ~~---iL~h~~vg~Fi----tH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~---~~~  384 (456)
T PLN02210        315 QVLQEMVKEGQGVVLEWSPQEK---ILSHMAISCFV----THCGWNSTIETVVAGVPVVAYPSWTDQPIDARLL---VDV  384 (456)
T ss_pred             hhHHhhccCCCeEEEecCCHHH---HhcCcCcCeEE----eeCCcccHHHHHHcCCCEEecccccccHHHHHHH---HHH
Confidence            3344443223445679998765   577776  555    223335899999999999998765322    223   22 


Q ss_pred             CceeEeeC------CCCHHHHHHHHHHhhhCHH------HHHHHHHHHHHHHH-hCCHHHHHHHHH
Q 009759          436 GKIGYLFN------PGDLDDCLSKLEPLLYNQE------LRETMGQAARQEME-KYDWRAATRTIR  488 (526)
Q Consensus       436 ~~~g~~~~------~~d~~~la~ai~~ll~d~~------~~~~~~~~a~~~~~-~fs~~~~~~~~~  488 (526)
                      -+.|+.+.      .-+.+++++++.+++.+++      ..+++++.+++.++ .=|.....+.++
T Consensus       385 ~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v  450 (456)
T PLN02210        385 FGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFI  450 (456)
T ss_pred             hCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence            35665553      2378899999999997643      22334455555553 334444444443

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=98.45  E-value=4.7e-05  Score=71.27  Aligned_cols=272  Identities=11%  Similarity=0.056  Sum_probs=155.5

Q ss_pred             cHHHHHHHHhcCCCEEEECCCchHH-HHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEe
Q 009759          193 SPRIISEVARFKPDIIHASSPGIMV-FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  271 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~~~~~~-~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  271 (526)
                      ...+.+..+..+.+-+++|+..... +.+++..+..-.++.+++.+.  +.. .....+..+....+.+.+.++..++++
T Consensus        28 a~avi~~a~~~r~~rff~HGqFn~~lwlall~g~~~~~q~yWhiWGa--DLY-e~~~~lk~rlfy~lRR~aq~rvg~v~a  104 (322)
T PRK02797         28 AEAVIAKAKANRAQRFFLHGQFNPTLWLALLSGKIKPKQFYWHIWGA--DLY-EESKGLKFRLFYPLRRLAQKRVGHVFA  104 (322)
T ss_pred             HHHHHHHHhhCccceEEEecCCCHHHHHHHHhCCcCccceEEEEECh--hhh-hcccchhHHHHHHHHHHHHhhcCeEEE
Confidence            3444555555677888898854333 333333333333455544442  222 222455556667788889999999999


Q ss_pred             CChhHHHHH-HHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecc-cccccHHHHHHHHHhC-
Q 009759          272 PSVAIGKDL-EAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRL-  348 (526)
Q Consensus       272 ~S~~~~~~l-~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l-~~~Kg~~~li~a~~~l-  348 (526)
                       .......+ ++.+..+ .+....|.-.+.........          ..++..+.+.+|+- ++.-+...+++++.+. 
T Consensus       105 -trGD~~~~a~~~~~v~-~~llyfpt~m~~~l~~~~~~----------~~~~~~~tIlvGNSgd~SN~Hie~L~~l~~~~  172 (322)
T PRK02797        105 -TRGDLSYFAQRHPKVP-GSLLYFPTRMDPSLNTMAND----------RQRAGKMTILVGNSGDRSNRHIEALRALHQQF  172 (322)
T ss_pred             -ecchHHHHHHhcCCCC-ccEEecCCcchhhhcccccc----------ccCCCceEEEEeCCCCCcccHHHHHHHHHHHh
Confidence             55555554 4554443 33433333232221111100          11233455667765 5555677777777665 


Q ss_pred             -CCcEEEEE-e----CCccHHHHHHHhcCC----CeE-EecccChhhHHHHHHcCcEEEecC-CCCCCcHHHHHHHHcCC
Q 009759          349 -PEARIAFI-G----DGPYREELEKMFTGM----PAV-FTGMLLGEELSQAYASGDVFVMPS-ESETLGLVVLEAMSSGI  416 (526)
Q Consensus       349 -~~~~l~iv-G----~g~~~~~l~~l~~~~----~V~-~~g~v~~~~l~~~~~~aDv~v~ps-~~e~~~~~ilEAma~G~  416 (526)
                       .++++++. |    +..+.+++++...+.    +++ +..+++.+|..++++.||+.++-- +-.|+|+.++ .+.+|+
T Consensus       173 ~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~l-Li~~G~  251 (322)
T PRK02797        173 GDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCL-LIQLGK  251 (322)
T ss_pred             CCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHH-HHHCCC
Confidence             46777663 3    334566666655533    444 467889999999999999998764 4678886554 899999


Q ss_pred             cEEEe-CCCCCCceecccCCCceeEeeCCCC--HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 009759          417 PVVGV-RAGGIPDIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       417 PvI~~-~~gg~~e~v~~~~~~~~g~~~~~~d--~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~  493 (526)
                      ||+.+ +.+-..++.   +.+... +++.++  ...+.+          ..+++...-++.+. |+-++..+.+. .++.
T Consensus       252 ~v~l~r~n~fwqdl~---e~gv~V-lf~~d~L~~~~v~e----------~~rql~~~dk~~I~-Ff~pn~~~~W~-~~l~  315 (322)
T PRK02797        252 PVVLSRDNPFWQDLT---EQGLPV-LFTGDDLDEDIVRE----------AQRQLASVDKNIIA-FFSPNYLQGWR-NALA  315 (322)
T ss_pred             cEEEecCCchHHHHH---hCCCeE-EecCCcccHHHHHH----------HHHHHHhhCcceee-ecCHhHHHHHH-HHHH
Confidence            99877 455666665   444443 233322  222222          12223333333333 89899888886 5665


Q ss_pred             HHH
Q 009759          494 AAI  496 (526)
Q Consensus       494 ~~l  496 (526)
                      .+.
T Consensus       316 ~~~  318 (322)
T PRK02797        316 IAA  318 (322)
T ss_pred             Hhh
Confidence            543

>PLN02562 UDP-glycosyltransferase

Probab=98.44  E-value=0.00099  Score=68.21  Aligned_cols=137  Identities=11%  Similarity=0.034  Sum_probs=86.7

Q ss_pred             CCcEEEEEeccc---ccccHHHHHHHHHhCCCcEEEE-EeCC---ccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcE
Q 009759          322 DKPLIVHVGRLG---VEKSLDFLKRVMDRLPEARIAF-IGDG---PYREELEKMFTGMPAVFTGMLLGEELSQAYASGDV  394 (526)
Q Consensus       322 ~~~~i~~vG~l~---~~Kg~~~li~a~~~l~~~~l~i-vG~g---~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv  394 (526)
                      +..+++.+|+..   ..+-++.+..+++..+. +|+. +..+   ...+.+.+... .|+.+.+|+|+.++   ++..++
T Consensus       273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~-~fiW~~~~~~~~~l~~~~~~~~~-~~~~v~~w~PQ~~i---L~h~~v  347 (448)
T PLN02562        273 NSVIYISFGSWVSPIGESNVRTLALALEASGR-PFIWVLNPVWREGLPPGYVERVS-KQGKVVSWAPQLEV---LKHQAV  347 (448)
T ss_pred             CceEEEEecccccCCCHHHHHHHHHHHHHCCC-CEEEEEcCCchhhCCHHHHHHhc-cCEEEEecCCHHHH---hCCCcc
Confidence            345677888853   44567888888888854 5443 4321   22223333332 36788899987654   555554


Q ss_pred             EEecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCC-CceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHH
Q 009759          395 FVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQD-GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  468 (526)
Q Consensus       395 ~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~-~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~  468 (526)
                      ..+-  ..+.-++++||+.+|+|+|+....+    ....+   .+ -+.|+-+...+.++++++|.+++.+++.+++..
T Consensus       348 ~~fv--tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~---~~~~g~g~~~~~~~~~~l~~~v~~~l~~~~~r~~a~  421 (448)
T PLN02562        348 GCYL--THCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYI---VDVWKIGVRISGFGQKEVEEGLRKVMEDSGMGERLM  421 (448)
T ss_pred             ceEE--ecCcchhHHHHHHcCCCEEeCCcccchHHHHHHH---HHHhCceeEeCCCCHHHHHHHHHHHhCCHHHHHHHH
Confidence            3222  2344568999999999999886643    22223   22 245565555688999999999998876655543

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=98.42  E-value=0.0012  Score=67.52  Aligned_cols=131  Identities=18%  Similarity=0.202  Sum_probs=79.7

Q ss_pred             CCCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEEeCC----c-----cHHHHHHHhcCCCeEEecccChhhHHHHH
Q 009759          321 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDG----P-----YREELEKMFTGMPAVFTGMLLGEELSQAY  389 (526)
Q Consensus       321 ~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~ivG~g----~-----~~~~l~~l~~~~~V~~~g~v~~~~l~~~~  389 (526)
                      ++..+.+.+|+...  .+-+..+..+++..+.--+.++..+    .     ..+.+++...+ +..+.+|+|+.++   +
T Consensus       263 ~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~-~g~v~~w~PQ~~i---L  338 (451)
T PLN02410        263 KNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISG-RGYIVKWAPQKEV---L  338 (451)
T ss_pred             CCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccC-CeEEEccCCHHHH---h
Confidence            34566778887743  3446667777777654223333311    1     12233333333 5677799987764   5


Q ss_pred             HcCcE--EEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCCC-ceeEee-CCCCHHHHHHHHHHhhhCH
Q 009759          390 ASGDV--FVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDG-KIGYLF-NPGDLDDCLSKLEPLLYNQ  461 (526)
Q Consensus       390 ~~aDv--~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~~-~~g~~~-~~~d~~~la~ai~~ll~d~  461 (526)
                      ...++  +|    ..+.-++++||+++|+|+|+....+-    ...+   .+. +.|+-+ ..-+.++++++|.+++.++
T Consensus       339 ~h~~v~~fv----tH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~---~~~~~~G~~~~~~~~~~~v~~av~~lm~~~  411 (451)
T PLN02410        339 SHPAVGGFW----SHCGWNSTLESIGEGVPMICKPFSSDQKVNARYL---ECVWKIGIQVEGDLDRGAVERAVKRLMVEE  411 (451)
T ss_pred             CCCccCeee----ecCchhHHHHHHHcCCCEEeccccccCHHHHHHH---HHHhCeeEEeCCcccHHHHHHHHHHHHcCC
Confidence            55444  65    23444689999999999999876432    2222   122 456555 3347899999999999775


Q ss_pred             H
Q 009759          462 E  462 (526)
Q Consensus       462 ~  462 (526)
                      +
T Consensus       412 ~  412 (451)
T PLN02410        412 E  412 (451)
T ss_pred             c
Confidence            3

>PLN00414 glycosyltransferase family protein

Probab=98.42  E-value=0.00047  Score=70.36  Aligned_cols=338  Identities=14%  Similarity=0.092  Sum_probs=169.6

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc-----cc-Cceecccc-----ccCCCccc--
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE-----FY-GAKLIGSR-----SFPCPWYQ--  184 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~-----~~-~~~~~~~~-----~~~~~~~~--  184 (526)
                      +.+|+++    |++ .-|+-.-+.+|++.|..+|++|+++++......-     .. .+....+.     .++.....  
T Consensus         4 ~~HVvlv----Pfp-aqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~~~   78 (446)
T PLN00414          4 KFHAFMY----PWF-GFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGAETAS   78 (446)
T ss_pred             CCEEEEe----cCc-ccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcccccc
Confidence            3577776    334 3588899999999999999999999975421100     00 11111110     01100000  


Q ss_pred             cccc-----hh----cccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEec-------------C----
Q 009759          185 KVPL-----SL----ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHT-------------H----  238 (526)
Q Consensus       185 ~~~~-----~~----~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~-------------~----  238 (526)
                      ....     ..    .....+.+++....||+|+...   .. .+.-.++..|+|.++..-.             .    
T Consensus        79 ~l~~~~~~~~~~a~~~l~~~l~~~L~~~~p~cVV~D~---~~-wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~~~~~  154 (446)
T PLN00414         79 DLPNSTKKPIFDAMDLLRDQIEAKVRALKPDLIFFDF---VH-WVPEMAKEFGIKSVNYQIISAACVAMVLAPRAELGFP  154 (446)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECC---ch-hHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhhcCCC
Confidence            0000     00    1112334445556788887752   22 3455678889997653211             0    


Q ss_pred             Ccccccc----cc-c-----ccccchHHHH--HHHHhhcCcEEEeCChhHHHH-HHHhccc-CCCcEEEeecCCCCCCCC
Q 009759          239 VPVYIPR----YT-F-----SWLVKPMWLV--IKFLHRAADLTLVPSVAIGKD-LEAARVT-AANKIRIWKKGVDSESFH  304 (526)
Q Consensus       239 ~~~~~~~----~~-~-----~~~~~~~~~~--~~~~~~~ad~ii~~S~~~~~~-l~~~~~~-~~~ki~vi~ngid~~~~~  304 (526)
                      .+. .+.    .. .     ..........  ....+..+|.++++|-...+. +.+.... ...++..|..-+....-.
T Consensus       155 ~pg-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~  233 (446)
T PLN00414        155 PPD-YPLSKVALRGHDANVCSLFANSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNK  233 (446)
T ss_pred             CCC-CCCCcCcCchhhcccchhhcccHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccc
Confidence            010 010    00 0     0000000001  112346688999988554332 2222210 012455554433111000


Q ss_pred             -CCcccHHHHHhhcCCCCCCcEEEEEeccccc--ccHHHHHHHHHhCCCcEE--EEE---eCC----ccHHHHHHHhcCC
Q 009759          305 -PRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARI--AFI---GDG----PYREELEKMFTGM  372 (526)
Q Consensus       305 -~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~--Kg~~~li~a~~~l~~~~l--~iv---G~g----~~~~~l~~l~~~~  372 (526)
                       ..........-+....+...+.+.+|++...  +.+..+...++.- +..|  ++.   |.+    ...+.+++..++.
T Consensus       234 ~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s-~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~  312 (446)
T PLN00414        234 SGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELT-GLPFLIAVMPPKGSSTVQEALPEGFEERVKGR  312 (446)
T ss_pred             cCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHc-CCCeEEEEecCCCcccchhhCChhHHHHhcCC
Confidence             0001112222232234455667788887543  3344444433333 3333  332   211    1234455556666


Q ss_pred             CeEEecccChhhHHHHHHcC--cEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCCCceeEeeCC--
Q 009759          373 PAVFTGMLLGEELSQAYASG--DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFNP--  444 (526)
Q Consensus       373 ~V~~~g~v~~~~l~~~~~~a--Dv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~~~~g~~~~~--  444 (526)
                      +..+.||+|+.++   ++.+  +++|    ..+.-++++||+++|+|+|+....+-    ...+.  +.-+.|+.+..  
T Consensus       313 g~vv~~w~PQ~~v---L~h~~v~~fv----tH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~--~~~g~g~~~~~~~  383 (446)
T PLN00414        313 GIVWEGWVEQPLI---LSHPSVGCFV----NHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLT--EELEVSVKVQRED  383 (446)
T ss_pred             CeEEeccCCHHHH---hcCCccceEE----ecCchhHHHHHHHcCCCEEecCcccchHHHHHHHH--HHhCeEEEecccc
Confidence            7888899987664   5555  5566    33445799999999999999876432    22220  22355655531  


Q ss_pred             ---CCHHHHHHHHHHhhhCH-HHHHHHHHHHHHHH
Q 009759          445 ---GDLDDCLSKLEPLLYNQ-ELRETMGQAARQEM  475 (526)
Q Consensus       445 ---~d~~~la~ai~~ll~d~-~~~~~~~~~a~~~~  475 (526)
                         -+.+++++++.+++.++ +..+++.+++++.-
T Consensus       384 ~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~  418 (446)
T PLN00414        384 SGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLK  418 (446)
T ss_pred             CCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Confidence               37899999999999764 45566666666554

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=98.41  E-value=0.00046  Score=65.68  Aligned_cols=222  Identities=9%  Similarity=0.035  Sum_probs=134.3

Q ss_pred             HHHHHHHHhcCCCEEEECCCchHH-HHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeC
Q 009759          194 PRIISEVARFKPDIIHASSPGIMV-FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  272 (526)
Q Consensus       194 ~~l~~~l~~~~pDiV~~~~~~~~~-~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  272 (526)
                      ..+....+..+.+-+++|+..... +.+++..+....++.+.+.+..-.  . ....+..+....+.+.+.++..+|++ 
T Consensus        68 ~avi~~a~~~r~~kff~HGqFn~~lwlaLl~g~~~~~k~~WhIWGaDLY--e-~~~~~k~rlfy~lRr~aq~rvg~V~a-  143 (360)
T PF07429_consen   68 QAVIAKAKADRADKFFLHGQFNPWLWLALLFGKIKLKKCYWHIWGADLY--E-DSRSLKFRLFYFLRRLAQKRVGHVFA-  143 (360)
T ss_pred             HHHHHHHhhCccceEEEeccCcHHHHHHHHcCCccccceEEEEeCchhh--c-cccccchhHHHHHHHHHHhhcCeEEE-
Confidence            344444555688889998854333 334444444455566655553221  1 22234455556677888888888876 


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecc-cccccHHHHHHHHHhC--C
Q 009759          273 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRL--P  349 (526)
Q Consensus       273 S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l-~~~Kg~~~li~a~~~l--~  349 (526)
                      .......+.+.++.....+...|.-++.........          ...+...-+.+|+- ++.-+.-.+++++++.  .
T Consensus       144 t~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~~~~----------~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~~  213 (360)
T PF07429_consen  144 TRGDLAYFQQRYPRVPASLLYFPTRMDPALTLSEKN----------KKNKGKLTILVGNSGDPSNNHIEALEALKQQFGD  213 (360)
T ss_pred             EcchHHHHHHHcCCCCceEEEcCCCCchhhhccccc----------cCCCCceEEEEcCCCCCCccHHHHHHHHHHhcCC
Confidence            566667777776533333434444444332221110          12234555667765 5555677777777654  4


Q ss_pred             CcEEEE-EeCC----ccHHHHHHHhcCC----CeEE-ecccChhhHHHHHHcCcEEEecCC-CCCCcHHHHHHHHcCCcE
Q 009759          350 EARIAF-IGDG----PYREELEKMFTGM----PAVF-TGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPV  418 (526)
Q Consensus       350 ~~~l~i-vG~g----~~~~~l~~l~~~~----~V~~-~g~v~~~~l~~~~~~aDv~v~ps~-~e~~~~~ilEAma~G~Pv  418 (526)
                      ++++++ .|-|    .+.+++.+...+.    ++.+ ..+++.+|..++++.||+.++... -.|+|+. +-.+.+|+||
T Consensus       214 ~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI-~lLl~~G~~v  292 (360)
T PF07429_consen  214 DVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNI-CLLLQLGKKV  292 (360)
T ss_pred             CeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHH-HHHHHcCCeE
Confidence            677766 3322    3555666555543    5665 579999999999999999999865 5788854 4599999999


Q ss_pred             EEeCCCCCCcee
Q 009759          419 VGVRAGGIPDII  430 (526)
Q Consensus       419 I~~~~gg~~e~v  430 (526)
                      +.+.....-..+
T Consensus       293 ~L~~~np~~~~l  304 (360)
T PF07429_consen  293 FLSRDNPFWQDL  304 (360)
T ss_pred             EEecCChHHHHH
Confidence            988655444333

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=98.37  E-value=0.0022  Score=66.13  Aligned_cols=160  Identities=16%  Similarity=0.136  Sum_probs=90.4

Q ss_pred             CCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEEeCCc--------cHHHHHHHhcCCCeEEecccChhhHHHHHHc
Q 009759          322 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGP--------YREELEKMFTGMPAVFTGMLLGEELSQAYAS  391 (526)
Q Consensus       322 ~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~ivG~g~--------~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~  391 (526)
                      ...+.+.+|++..  .+.+..+.++++..+.--+..++...        ..+.+.+.....++.+.+|+|+.+   ++..
T Consensus       283 ~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~---vL~h  359 (477)
T PLN02863        283 HKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVA---ILSH  359 (477)
T ss_pred             CceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHH---HhcC
Confidence            4456677887643  23477778888877442233444211        112333444455788899998755   4554


Q ss_pred             --CcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeC-----CCCHHHHHHHHHHhhh-
Q 009759          392 --GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFN-----PGDLDDCLSKLEPLLY-  459 (526)
Q Consensus       392 --aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~-----~~d~~~la~ai~~ll~-  459 (526)
                        ++++|    ..+.-++++||+++|+|+|+....+    ....+.  +.-+.|+-+.     .-+.+++.+++.+++. 
T Consensus       360 ~~v~~fv----tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~--~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~  433 (477)
T PLN02863        360 RAVGAFL----THCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLV--DELKVAVRVCEGADTVPDSDELARVFMESVSE  433 (477)
T ss_pred             CCcCeEE----ecCCchHHHHHHHcCCCEEeCCccccchhhHHHHH--HhhceeEEeccCCCCCcCHHHHHHHHHHHhhc
Confidence              56666    3444568999999999999986543    222220  2224555442     1267899999999883 


Q ss_pred             CHHHHHH---HHHHHHHHHH-hCCHHHHHHHHHHH
Q 009759          460 NQELRET---MGQAARQEME-KYDWRAATRTIRNE  490 (526)
Q Consensus       460 d~~~~~~---~~~~a~~~~~-~fs~~~~~~~~~~~  490 (526)
                      +++.+++   +++.+++.++ .=|.....+++++.
T Consensus       434 ~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~  468 (477)
T PLN02863        434 NQVERERAKELRRAALDAIKERGSSVKDLDGFVKH  468 (477)
T ss_pred             cHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence            4443332   3333334442 22333344444433

>PLN02173 UDP-glucosyl transferase family protein

Probab=98.36  E-value=0.0025  Score=65.02  Aligned_cols=141  Identities=9%  Similarity=0.101  Sum_probs=78.2

Q ss_pred             CCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEEeC-C-ccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEe
Q 009759          322 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGD-G-PYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  397 (526)
Q Consensus       322 ~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~ivG~-g-~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~  397 (526)
                      +..+.+.+|+...  .+-+..+.+++...+ +-.++-.. . ...+.+.+.....++.+.+|+|+.+   +++..++..+
T Consensus       264 ~svvyvsfGS~~~~~~~~~~ela~gLs~~~-flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~---iL~H~~v~~F  339 (449)
T PLN02173        264 GSVVYIAFGSMAKLSSEQMEEIASAISNFS-YLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQ---VLSNKAIGCF  339 (449)
T ss_pred             CceEEEEecccccCCHHHHHHHHHHhcCCC-EEEEEeccchhcccchHHHhhcCCceEEeCCCCHHH---HhCCCccceE
Confidence            3466777887643  223444445543332 22222211 1 1122233333345788899998655   5666664333


Q ss_pred             cCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCCC-ceeEeeCC------CCHHHHHHHHHHhhhCHHHHHH
Q 009759          398 PSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDG-KIGYLFNP------GDLDDCLSKLEPLLYNQELRET  466 (526)
Q Consensus       398 ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~~-~~g~~~~~------~d~~~la~ai~~ll~d~~~~~~  466 (526)
                      -+  .+..++++||+++|+|+|+....+-    ...+   .+. +.|+-+..      -+.+++++++.+++.+++ .++
T Consensus       340 vt--HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v---~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~-~~~  413 (449)
T PLN02173        340 MT--HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYI---QDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEK-SKE  413 (449)
T ss_pred             Ee--cCccchHHHHHHcCCCEEecCchhcchHHHHHH---HHHhCceEEEeecccCCcccHHHHHHHHHHHhcCCh-HHH
Confidence            22  3445799999999999999875432    2223   221 34544421      168999999999997643 234


Q ss_pred             HHHHHH
Q 009759          467 MGQAAR  472 (526)
Q Consensus       467 ~~~~a~  472 (526)
                      ++++++
T Consensus       414 ~r~~a~  419 (449)
T PLN02173        414 MKENAG  419 (449)
T ss_pred             HHHHHH
Confidence            443333

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=98.34  E-value=1.3e-06  Score=91.64  Aligned_cols=132  Identities=18%  Similarity=0.288  Sum_probs=81.2

Q ss_pred             CCCcEEEEEecccc---cccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCc--EE
Q 009759          321 PDKPLIVHVGRLGV---EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGD--VF  395 (526)
Q Consensus       321 ~~~~~i~~vG~l~~---~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aD--v~  395 (526)
                      ++..+++..|+...   .+-.+.++++++++++ +++..-++.....+.     .|+.+..|+|+.++   ++...  ++
T Consensus       275 ~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~~~~l~-----~n~~~~~W~PQ~~l---L~hp~v~~f  345 (500)
T PF00201_consen  275 KKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQ-RFIWKYEGEPPENLP-----KNVLIVKWLPQNDL---LAHPRVKLF  345 (500)
T ss_dssp             TTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTT-EEEEEETCSHGCHHH-----TTEEEESS--HHHH---HTSTTEEEE
T ss_pred             CCCEEEEecCcccchhHHHHHHHHHHHHhhCCC-ccccccccccccccc-----ceEEEeccccchhh---hhcccceee
Confidence            34556777888742   2236678899999987 666655543222222     38999999987655   65554  45


Q ss_pred             EecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCC--CCHHHHHHHHHHhhhCHHHHHHHH
Q 009759          396 VMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMG  468 (526)
Q Consensus       396 v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~--~d~~~la~ai~~ll~d~~~~~~~~  468 (526)
                      |    ..|.-+++.||+.+|+|+|+-..-|    ....+   ++.+.|...+.  -+.+++.++|.++++|+..++...
T Consensus       346 i----tHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~---~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~~y~~~a~  417 (500)
T PF00201_consen  346 I----THGGLNSTQEALYHGVPMLGIPLFGDQPRNAARV---EEKGVGVVLDKNDLTEEELRAAIREVLENPSYKENAK  417 (500)
T ss_dssp             E----ES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHH---HHTTSEEEEGGGC-SHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             e----eccccchhhhhhhccCCccCCCCcccCCccceEE---EEEeeEEEEEecCCcHHHHHHHHHHHHhhhHHHHHHH
Confidence            5    3455679999999999999986543    22233   33445666553  367999999999999986554443

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=98.32  E-value=0.0061  Score=62.62  Aligned_cols=132  Identities=14%  Similarity=0.113  Sum_probs=83.6

Q ss_pred             CCCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEEeC---C---------------c-----cHHHHHHHhcCCCeE
Q 009759          321 PDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGD---G---------------P-----YREELEKMFTGMPAV  375 (526)
Q Consensus       321 ~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~ivG~---g---------------~-----~~~~l~~l~~~~~V~  375 (526)
                      ++..+++.+|+...  .+.+..+..+++..+.--+..+..   +               +     ..+.+.+..++.++.
T Consensus       262 ~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~v  341 (481)
T PLN02992        262 NESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFV  341 (481)
T ss_pred             CCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEE
Confidence            45566778887743  456788888888886533333310   0               0     112334445555799


Q ss_pred             EecccChhhHHHHHHcCcE--EEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC----ceecccCCCceeEeeCC----C
Q 009759          376 FTGMLLGEELSQAYASGDV--FVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP----DIIPEDQDGKIGYLFNP----G  445 (526)
Q Consensus       376 ~~g~v~~~~l~~~~~~aDv--~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~----e~v~~~~~~~~g~~~~~----~  445 (526)
                      +.+|+|+.++   ++...+  +|    ..+.-++++||+.+|+|+|+....+-.    ..+.  +.-+.|..++.    -
T Consensus       342 v~~W~PQ~~i---L~h~~vg~Fi----tH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~--~~~g~gv~~~~~~~~~  412 (481)
T PLN02992        342 VPSWAPQAEI---LAHQAVGGFL----THCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLS--DELGIAVRSDDPKEVI  412 (481)
T ss_pred             EeecCCHHHH---hCCcccCeeE----ecCchhHHHHHHHcCCCEEecCccchhHHHHHHHH--HHhCeeEEecCCCCcc
Confidence            9999987664   555655  44    234456899999999999998765322    2220  12345555532    3


Q ss_pred             CHHHHHHHHHHhhhCH
Q 009759          446 DLDDCLSKLEPLLYNQ  461 (526)
Q Consensus       446 d~~~la~ai~~ll~d~  461 (526)
                      +.++++++|.+++.++
T Consensus       413 ~~~~l~~av~~vm~~~  428 (481)
T PLN02992        413 SRSKIEALVRKVMVEE  428 (481)
T ss_pred             cHHHHHHHHHHHhcCC
Confidence            7899999999999763

>PLN02534 UDP-glycosyltransferase

Probab=98.11  E-value=0.018  Score=59.54  Aligned_cols=131  Identities=15%  Similarity=0.107  Sum_probs=75.9

Q ss_pred             CCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEEeCC---c------cHHHHHHHhcCCCeEEecccChhhHHHHHH
Q 009759          322 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDG---P------YREELEKMFTGMPAVFTGMLLGEELSQAYA  390 (526)
Q Consensus       322 ~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~ivG~g---~------~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~  390 (526)
                      ...+++.+|+...  .+-+..+..+++...+--+.++..+   .      ..+.+.+.....++.+.||+|+.+   ++.
T Consensus       283 ~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~---iL~  359 (491)
T PLN02534        283 RSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVL---ILS  359 (491)
T ss_pred             CceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHH---Hhc
Confidence            4556677787642  3345556677777755333333321   1      112233333445788889998754   566


Q ss_pred             cCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC----ceecccCCCceeEeeC---------------CCCHHHHH
Q 009759          391 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP----DIIPEDQDGKIGYLFN---------------PGDLDDCL  451 (526)
Q Consensus       391 ~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~----e~v~~~~~~~~g~~~~---------------~~d~~~la  451 (526)
                      ..++..+-  ..+..++++||+++|+|+|+....+-.    ..+.  +.-+.|+-+.               .-+.++++
T Consensus       360 h~~v~~fv--tH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~--e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~  435 (491)
T PLN02534        360 HPAIGGFL--THCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIV--EVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVE  435 (491)
T ss_pred             CCccceEE--ecCccHHHHHHHHcCCCEEeccccccHHHHHHHHH--HhhcceEEecccccccccccccccCccCHHHHH
Confidence            67763222  345567999999999999998764311    1110  1111222110               12688999


Q ss_pred             HHHHHhhh
Q 009759          452 SKLEPLLY  459 (526)
Q Consensus       452 ~ai~~ll~  459 (526)
                      ++|.+++.
T Consensus       436 ~~v~~~m~  443 (491)
T PLN02534        436 KAVKTLMD  443 (491)
T ss_pred             HHHHHHhc
Confidence            99999996

>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E

Probab=98.04  E-value=0.01  Score=54.45  Aligned_cols=299  Identities=16%  Similarity=0.120  Sum_probs=145.5

Q ss_pred             CchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHHHh-cCCCEEEECC
Q 009759          134 SGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVAR-FKPDIIHASS  212 (526)
Q Consensus       134 gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~pDiV~~~~  212 (526)
                      .|+.+...++-.++.+.|+++.++.............+   ...        +.........+.+.+++ ..+||+++++
T Consensus         1 CGVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~dsH~---~~~--------~si~k~~~~e~de~v~~vN~yDI~m~nS   69 (355)
T PF11440_consen    1 CGVTRNALEMRDWFDKNGVEFTIVSADEKSFTRPDSHD---SKS--------FSIPKYLAKEYDETVKKVNDYDIVMFNS   69 (355)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEETSS--TTTTSSS----TT--------TEEEE-TTTHHHHHHHHHTSSSEEEEEE
T ss_pred             CCccccHHHHHHHHHhcCCeeEEEEecccccCCccccc---cce--------eeeehhhHHHHHHHHHHhhccCEEEEec
Confidence            37788889999999999999999987653221111100   000        11111112233444443 2899999986


Q ss_pred             CchHH-------HHHHHHHHhc-CCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhH--HHHHH-
Q 009759          213 PGIMV-------FGALIIAKLL-CVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAI--GKDLE-  281 (526)
Q Consensus       213 ~~~~~-------~~~~~~~~~~-~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~--~~~l~-  281 (526)
                      .+...       ..--++.+.. .+++|...|++......+..          ....+++.+|.|++.+...  .+.+. 
T Consensus        70 vPa~~vqE~~iNnY~kii~~Ik~~ik~V~~~Hdh~~lsI~rn~----------~le~~m~~~DvIfshs~~g~f~kv~m~  139 (355)
T PF11440_consen   70 VPATKVQEAIINNYEKIIKKIKPSIKVVGFMHDHNKLSIDRNP----------YLEGTMNEMDVIFSHSDNGWFSKVLMK  139 (355)
T ss_dssp             --BTTS-HHHHHHHHHHHHCS-TTSEEEEEE---SHHHHTTBS----------SHHHHHHH-SEEEES-TTSHHHHTHHH
T ss_pred             ccCchHHHHHHHHHHHHHHhccccceeEEEeeccceeeccccc----------cHHHHHHhhcEEEeccccchHHHHHHH
Confidence            43211       1111122222 35578889997543332221          1445788999999987542  22222 


Q ss_pred             Hhccc---CCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEE---EEEecccccccHHHHHHHHHhC---CCcE
Q 009759          282 AARVT---AANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLI---VHVGRLGVEKSLDFLKRVMDRL---PEAR  352 (526)
Q Consensus       282 ~~~~~---~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~vG~l~~~Kg~~~li~a~~~l---~~~~  352 (526)
                      .+.+.   ..+++...|....   |.|+..-...|..+.. +...+..   .|+||....||...+++.-+..   ++..
T Consensus       140 ~l~Ps~~~l~~~i~~~p~v~n---fqpp~~i~~~Rstywk-d~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~~~~~  215 (355)
T PF11440_consen  140 ELLPSKVSLFDRIKKFPMVFN---FQPPMDINKYRSTYWK-DVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKPAGFK  215 (355)
T ss_dssp             HHS-SS--SSS-------EEE-------B-HHHHHHHH----GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTTTT-E
T ss_pred             hhccccCchhhhhhhcceeee---cCCcccHHHHHHHHhh-hhHhhhcccceeeeeeeeecCcHHHhhhHHHhcCCcchh
Confidence            33321   1123333332221   3344333444444432 2333444   7999999999999999877665   4677


Q ss_pred             EEEEeCCccHHHHHHHhc-------------------CCCeEEecccChhhHHHHHHcCcEEEecCC------CCCCcHH
Q 009759          353 IAFIGDGPYREELEKMFT-------------------GMPAVFTGMLLGEELSQAYASGDVFVMPSE------SETLGLV  407 (526)
Q Consensus       353 l~ivG~g~~~~~l~~l~~-------------------~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~------~e~~~~~  407 (526)
                      -++-|-......+.-+-.                   ...+.++|..=.+|..+.|+.+-+...-+.      .+.+-.+
T Consensus       216 t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt  295 (355)
T PF11440_consen  216 TIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYT  295 (355)
T ss_dssp             EEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---HH
T ss_pred             HHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhh
Confidence            788783221122111111                   112778887777899999999888765543      2457789


Q ss_pred             HHHHHHcCCcEE-EeCCCCCC-------ceecccCCCceeEeeCCCCHHHHHHHHHHhhhC
Q 009759          408 VLEAMSSGIPVV-GVRAGGIP-------DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  460 (526)
Q Consensus       408 ilEAma~G~PvI-~~~~gg~~-------e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d  460 (526)
                      .+|..|||...| -...|...       .++   .+....+.++..|.++-.+.|.++.++
T Consensus       296 ~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~---~~~~~~I~~De~dle~T~ekl~E~a~~  353 (355)
T PF11440_consen  296 QIELIAVGTIPVFDKSWGENNRFTLDGTRYI---DHPYSAIYFDENDLESTVEKLIEVANN  353 (355)
T ss_dssp             HHHHHHCTSEEEEEHHHHHHSB-TTTSSBGG---SS--S-EEE-TTSHHHHHHHHHHHHT-
T ss_pred             eeeeeeeceeeeeeccccccceeeecCceee---ccCcceeEeccchHHHHHHHHHHHhcc
Confidence            999999996555 44444221       223   334445667888888888888887655

coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=97.97  E-value=0.029  Score=57.39  Aligned_cols=131  Identities=15%  Similarity=0.099  Sum_probs=78.3

Q ss_pred             CCcEEEEEeccc--ccccHHHHHHHHHhCCCcEEEEEeCC---------cc------HHHHHHHhcCCCeEEecccChhh
Q 009759          322 DKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFIGDG---------PY------REELEKMFTGMPAVFTGMLLGEE  384 (526)
Q Consensus       322 ~~~~i~~vG~l~--~~Kg~~~li~a~~~l~~~~l~ivG~g---------~~------~~~l~~l~~~~~V~~~g~v~~~~  384 (526)
                      +..+.+.+|++.  ..+.++.+..+++..+.--+.++...         ..      .+.+.+.. ..+..+.+|+|+.+
T Consensus       261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~-~~~g~v~~W~PQ~~  339 (455)
T PLN02152        261 SSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL-EEVGMIVSWCSQIE  339 (455)
T ss_pred             CceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhc-cCCeEEEeeCCHHH
Confidence            456677788763  34567888888888865333334321         10      01122222 23567789998665


Q ss_pred             HHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCC-CceeEeeC-----CCCHHHHHHHH
Q 009759          385 LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQD-GKIGYLFN-----PGDLDDCLSKL  454 (526)
Q Consensus       385 l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~-~~~g~~~~-----~~d~~~la~ai  454 (526)
                         +++..++..+-+  .+.-++++||+.+|+|+|+....+-    ...+   .+ -+.|+-+.     .-+.++++++|
T Consensus       340 ---iL~h~~vg~fvt--H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~---~~~~~~G~~~~~~~~~~~~~e~l~~av  411 (455)
T PLN02152        340 ---VLRHRAVGCFVT--HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLL---EEIWKTGVRVRENSEGLVERGEIRRCL  411 (455)
T ss_pred             ---HhCCcccceEEe--eCCcccHHHHHHcCCCEEeccccccchHHHHHH---HHHhCceEEeecCcCCcCcHHHHHHHH
Confidence               566676533333  3445689999999999998865431    1222   11 02333331     12689999999


Q ss_pred             HHhhhCH
Q 009759          455 EPLLYNQ  461 (526)
Q Consensus       455 ~~ll~d~  461 (526)
                      .+++.++
T Consensus       412 ~~vm~~~  418 (455)
T PLN02152        412 EAVMEEK  418 (455)
T ss_pred             HHHHhhh
Confidence            9999754

>PLN00164 glucosyltransferase; Provisional

Probab=97.96  E-value=0.034  Score=57.59  Aligned_cols=145  Identities=14%  Similarity=0.093  Sum_probs=84.6

Q ss_pred             CCcEEEEEecccc--cccHHHHHHHHHhCCCcEEE-EEeCCc---------------cHHHHHHHhcCCCeEEecccChh
Q 009759          322 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIA-FIGDGP---------------YREELEKMFTGMPAVFTGMLLGE  383 (526)
Q Consensus       322 ~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~-ivG~g~---------------~~~~l~~l~~~~~V~~~g~v~~~  383 (526)
                      ...+.+.+|+...  .+.+..+..+++..+. .|+ ++....               ..+.+.+..++.++.+.+|+|+.
T Consensus       272 ~svvyvsfGS~~~~~~~q~~ela~gL~~s~~-~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~  350 (480)
T PLN00164        272 ASVVFLCFGSMGFFDAPQVREIAAGLERSGH-RFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQK  350 (480)
T ss_pred             CceEEEEecccccCCHHHHHHHHHHHHHcCC-CEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHH
Confidence            3456677787522  2347777888877643 544 333211               11233344445568888999865


Q ss_pred             hHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCCCceeEeeCC-------CCHHHHHH
Q 009759          384 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFNP-------GDLDDCLS  452 (526)
Q Consensus       384 ~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~~~~g~~~~~-------~d~~~la~  452 (526)
                      +   ++..+++..+-+  .+.-++++||+++|+|+|+...-+-    ...+.  +.-+.|+.+..       -+.+++++
T Consensus       351 ~---iL~h~~vg~fvt--H~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~--~~~gvG~~~~~~~~~~~~~~~e~l~~  423 (480)
T PLN00164        351 E---ILAHAAVGGFVT--HCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELV--ADMGVAVAMKVDRKRDNFVEAAELER  423 (480)
T ss_pred             H---HhcCcccCeEEe--ecccchHHHHHHcCCCEEeCCccccchhHHHHHH--HHhCeEEEeccccccCCcCcHHHHHH
Confidence            5   466666433222  2334689999999999999865432    21220  22355655431       26799999


Q ss_pred             HHHHhhhCHH-HHHHHHHHHHHH
Q 009759          453 KLEPLLYNQE-LRETMGQAARQE  474 (526)
Q Consensus       453 ai~~ll~d~~-~~~~~~~~a~~~  474 (526)
                      +|.+++.+++ ..+++++++++.
T Consensus       424 av~~vm~~~~~~~~~~r~~a~~~  446 (480)
T PLN00164        424 AVRSLMGGGEEEGRKAREKAAEM  446 (480)
T ss_pred             HHHHHhcCCchhHHHHHHHHHHH
Confidence            9999997643 234444444443

>PLN03015 UDP-glucosyl transferase

Probab=97.91  E-value=0.038  Score=56.59  Aligned_cols=186  Identities=14%  Similarity=0.048  Sum_probs=98.1

Q ss_pred             hhcCcEEEeCChhHHHH-HHHhcccC-------CCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccc
Q 009759          263 HRAADLTLVPSVAIGKD-LEAARVTA-------ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV  334 (526)
Q Consensus       263 ~~~ad~ii~~S~~~~~~-l~~~~~~~-------~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~  334 (526)
                      ...++.++++|-...+. +.+.....       ..++..|..-+... .. .....+...-+....++..+.+.+|+...
T Consensus       202 ~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~-~~-~~~~~~~~~WLd~~~~~sVvyvsFGS~~~  279 (470)
T PLN03015        202 VPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTN-VH-VEKRNSIFEWLDKQGERSVVYVCLGSGGT  279 (470)
T ss_pred             cccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCc-cc-ccchHHHHHHHHhCCCCCEEEEECCcCCc
Confidence            56799999988654432 22111100       12344444333111 11 11112222223222344556677787733


Q ss_pred             --cccHHHHHHHHHhCCCcEEEEEeC-----------Cc-----cHHHHHHHhcCCCeEEecccChhhHHHHHHcCcE--
Q 009759          335 --EKSLDFLKRVMDRLPEARIAFIGD-----------GP-----YREELEKMFTGMPAVFTGMLLGEELSQAYASGDV--  394 (526)
Q Consensus       335 --~Kg~~~li~a~~~l~~~~l~ivG~-----------g~-----~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv--  394 (526)
                        ...+..+..+++..+.--+.++..           ..     ..+.+.+..++.++.+.+|+|+.++.   +...+  
T Consensus       280 ~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL---~h~~vg~  356 (470)
T PLN03015        280 LTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEIL---SHRSIGG  356 (470)
T ss_pred             CCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHh---ccCccCe
Confidence              345777788888876522233321           00     11233344444467888999877654   44443  


Q ss_pred             EEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC----ceecccCCCceeEeeC------CCCHHHHHHHHHHhhh
Q 009759          395 FVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP----DIIPEDQDGKIGYLFN------PGDLDDCLSKLEPLLY  459 (526)
Q Consensus       395 ~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~----e~v~~~~~~~~g~~~~------~~d~~~la~ai~~ll~  459 (526)
                      +|    ..+.-++++||+.+|+|+|+....+-.    ..+.  +.-+.|+-+.      .-+.++++++|.+++.
T Consensus       357 fv----tH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~--~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~  425 (470)
T PLN03015        357 FL----SHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLT--EEIGVAVRTSELPSEKVIGREEVASLVRKIVA  425 (470)
T ss_pred             EE----ecCCchhHHHHHHcCCCEEecccccchHHHHHHHH--HHhCeeEEecccccCCccCHHHHHHHHHHHHc
Confidence            44    233346899999999999998764311    1110  1223444332      1367899999999995

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.87  E-value=6.3e-07  Score=78.99  Aligned_cols=110  Identities=17%  Similarity=0.265  Sum_probs=68.7

Q ss_pred             cEE-EEEeCCccHHHHHHHhcC--CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC-
Q 009759          351 ARI-AFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI-  426 (526)
Q Consensus       351 ~~l-~ivG~g~~~~~l~~l~~~--~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~-  426 (526)
                      +++ +++|...+.+.... ...  .+|.+.+++  +++.++|+.||++|    .-+.++++.|++++|+|.|.-...+. 
T Consensus        32 ~~viv~~G~~~~~~~~~~-~~~~~~~v~~~~~~--~~m~~~m~~aDlvI----s~aG~~Ti~E~l~~g~P~I~ip~~~~~  104 (167)
T PF04101_consen   32 IQVIVQTGKNNYEELKIK-VENFNPNVKVFGFV--DNMAELMAAADLVI----SHAGAGTIAEALALGKPAIVIPLPGAA  104 (167)
T ss_dssp             CCCCCCCTTCECHHHCCC-HCCTTCCCEEECSS--SSHHHHHHHHSEEE----ECS-CHHHHHHHHCT--EEEE--TTT-
T ss_pred             cEEEEEECCCcHHHHHHH-HhccCCcEEEEech--hhHHHHHHHcCEEE----eCCCccHHHHHHHcCCCeeccCCCCcc
Confidence            444 44565544443333 333  479999998  57999999999999    33456899999999999987766551 


Q ss_pred             -------CceecccCCCceeEeeC--CCCHHHHHHHHHHhhhCHHHHHHHHHH
Q 009759          427 -------PDIIPEDQDGKIGYLFN--PGDLDDCLSKLEPLLYNQELRETMGQA  470 (526)
Q Consensus       427 -------~e~v~~~~~~~~g~~~~--~~d~~~la~ai~~ll~d~~~~~~~~~~  470 (526)
                             ...+   .....|..+.  ..+++.|.++|..++.++.....+.++
T Consensus       105 ~~~q~~na~~~---~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~  154 (167)
T PF04101_consen  105 DNHQEENAKEL---AKKGAAIMLDESELNPEELAEAIEELLSDPEKLKEMAKA  154 (167)
T ss_dssp             T-CHHHHHHHH---HHCCCCCCSECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred             hHHHHHHHHHH---HHcCCccccCcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence                   1112   2222333333  234688999999999998876665443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=97.86  E-value=0.0075  Score=54.83  Aligned_cols=257  Identities=14%  Similarity=0.088  Sum_probs=135.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      |||..+++     ...|....+..|++.|...-+.|.++..+.  .....   ..-...++.++.+.      .+.....
T Consensus         1 ~ki~aisD-----~RtGnt~QaiaLa~~l~r~eyttk~l~~~~--l~~lP---~~wl~~yp~~~~~~------l~~~~~~   64 (329)
T COG3660           1 MKIWAISD-----GRTGNTHQAIALAEQLTRSEYTTKLLEYNN--LAKLP---NFWLAYYPIHILRE------LFGPRLS   64 (329)
T ss_pred             CceEEeec-----CCCccHHHHHHHHHHhhccceEEEEeeccc--cccCc---hhhhhcCccHhHHH------hhcCccc
Confidence            78877765     457888999999999987445555554431  11000   00000111111000      0001111


Q ss_pred             HHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHH
Q 009759          199 EVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGK  278 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~  278 (526)
                      ...+..||+++..+-..... +..+++..+-+.++.+.+..-                     =++..|.+|++-++..+
T Consensus        65 r~p~~~Pdl~I~aGrrta~l-~~~lkk~~~~~~vVqI~~Prl---------------------p~~~fDlvivp~HD~~~  122 (329)
T COG3660          65 RKPEQRPDLIITAGRRTAPL-AFYLKKKFGGIKVVQIQDPRL---------------------PYNHFDLVIVPYHDWRE  122 (329)
T ss_pred             cCccCCCceEEecccchhHH-HHHHHHhcCCceEEEeeCCCC---------------------CcccceEEeccchhhhh
Confidence            11234799999987655444 444555555565655555211                     12457999988887776


Q ss_pred             HHHHhcccCCCcEEEe---ecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccH-----HHHHHHHH-hC-
Q 009759          279 DLEAARVTAANKIRIW---KKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSL-----DFLKRVMD-RL-  348 (526)
Q Consensus       279 ~l~~~~~~~~~ki~vi---~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~-----~~li~a~~-~l-  348 (526)
                      .....+    .++.-+   +|.|......+   ..+....+. .....++-++||.-.+.-.+     ..+..++. .+ 
T Consensus       123 ~~s~~~----~Nilpi~Gs~h~Vt~~~lAa---~~e~~~~~~-p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~  194 (329)
T COG3660         123 ELSDQG----PNILPINGSPHNVTSQRLAA---LREAFKHLL-PLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE  194 (329)
T ss_pred             hhhccC----CceeeccCCCCcccHHHhhh---hHHHHHhhC-CCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH
Confidence            633322    243332   22222222111   112222222 34567778899976554332     22333332 22 


Q ss_pred             -CCcEEEEEeCCccHHHHHHHhcCC-----CeEEecc-cChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          349 -PEARIAFIGDGPYREELEKMFTGM-----PAVFTGM-LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       349 -~~~~l~ivG~g~~~~~l~~l~~~~-----~V~~~g~-v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                       ....|++--+....+.++..++..     .+.+-+. ....-..+++++||.+|.....   =....||.+.|+||-+-
T Consensus       195 ~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~  271 (329)
T COG3660         195 NQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADS---INMCSEAASTGKPVFIL  271 (329)
T ss_pred             hCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecch---hhhhHHHhccCCCeEEE
Confidence             356777766655566666666542     2333222 1223567899999999976442   13457999999999875


Q ss_pred             CCC
Q 009759          422 RAG  424 (526)
Q Consensus       422 ~~g  424 (526)
                      ...
T Consensus       272 ~~~  274 (329)
T COG3660         272 EPP  274 (329)
T ss_pred             ecC
Confidence            433

>PLN02555 limonoid glucosyltransferase

Probab=97.81  E-value=0.058  Score=55.62  Aligned_cols=141  Identities=17%  Similarity=0.099  Sum_probs=81.4

Q ss_pred             CcEEEEEeccc--ccccHHHHHHHHHhCCCcEEEEE-eCC---------ccHHHHHHHhcCCCeEEecccChhhHHHHHH
Q 009759          323 KPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFI-GDG---------PYREELEKMFTGMPAVFTGMLLGEELSQAYA  390 (526)
Q Consensus       323 ~~~i~~vG~l~--~~Kg~~~li~a~~~l~~~~l~iv-G~g---------~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~  390 (526)
                      ..+.+.+|++.  ..+.+..++.+++..+ .+|+.+ ...         ...+.+.+.. ..++.+.+|+|+.++... .
T Consensus       278 sVvyvsfGS~~~~~~~q~~ela~~l~~~~-~~flW~~~~~~~~~~~~~~~lp~~~~~~~-~~~g~v~~W~PQ~~iL~H-~  354 (480)
T PLN02555        278 SVVYISFGTVVYLKQEQIDEIAYGVLNSG-VSFLWVMRPPHKDSGVEPHVLPEEFLEKA-GDKGKIVQWCPQEKVLAH-P  354 (480)
T ss_pred             ceeEEEeccccCCCHHHHHHHHHHHHhcC-CeEEEEEecCcccccchhhcCChhhhhhc-CCceEEEecCCHHHHhCC-C
Confidence            45667788763  2345666777777664 465543 311         0111222222 236778899987654322 4


Q ss_pred             cCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCC-ceeEeeC-------CCCHHHHHHHHHHhh
Q 009759          391 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDG-KIGYLFN-------PGDLDDCLSKLEPLL  458 (526)
Q Consensus       391 ~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~-~~g~~~~-------~~d~~~la~ai~~ll  458 (526)
                      ++.++|    ..+.-++++||+.+|+|+|+...-+    ....+   .+. +.|+-+.       .-+.++++++|.+++
T Consensus       355 ~v~~Fv----tH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~---~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm  427 (480)
T PLN02555        355 SVACFV----THCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYL---VDVFKTGVRLCRGEAENKLITREEVAECLLEAT  427 (480)
T ss_pred             ccCeEE----ecCCcchHHHHHHcCCCEEeCCCccccHHHHHHH---HHHhCceEEccCCccccCcCcHHHHHHHHHHHh
Confidence            456666    3344568999999999999987643    11222   122 4555441       126789999999999


Q ss_pred             hCHHHHHHHHHHHHHH
Q 009759          459 YNQELRETMGQAARQE  474 (526)
Q Consensus       459 ~d~~~~~~~~~~a~~~  474 (526)
                      .+++ .+++++++++.
T Consensus       428 ~~~~-g~~~r~ra~~l  442 (480)
T PLN02555        428 VGEK-AAELKQNALKW  442 (480)
T ss_pred             cCch-HHHHHHHHHHH
Confidence            7532 34444444443

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=97.80  E-value=0.012  Score=57.21  Aligned_cols=247  Identities=17%  Similarity=0.172  Sum_probs=136.1

Q ss_pred             CccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHHHhcCCCEEEE
Q 009759          131 SYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHA  210 (526)
Q Consensus       131 ~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiV~~  210 (526)
                      ...-|-+..+..+.+.|. .|.++++++.++.......+++...               ......+.+.++  +.|++++
T Consensus         9 ~~N~GDe~~l~~~l~~l~-~~~~~~v~s~~p~~~~~~~~v~~~~---------------r~~~~~~~~~l~--~~D~vI~   70 (298)
T TIGR03609         9 FGNLGDEALLAALLRELP-PGVEPTVLSNDPAETAKLYGVEAVN---------------RRSLLAVLRALR--RADVVIW   70 (298)
T ss_pred             CCCcchHHHHHHHHHhcC-CCCeEEEecCChHHHHhhcCceEEc---------------cCCHHHHHHHHH--HCCEEEE
Confidence            345677777777877775 5788888876654333323322111               011234555555  6688877


Q ss_pred             CCCchH----------H-HHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHH
Q 009759          211 SSPGIM----------V-FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKD  279 (526)
Q Consensus       211 ~~~~~~----------~-~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~  279 (526)
                      .+...+          . +....+++..++|+++.-.+..|...         ...+.+.+.+++.+|.+.+=.+...+.
T Consensus        71 gGG~l~~d~~~~~~~~~~~~~~~~a~~~~k~~~~~g~giGP~~~---------~~~r~~~~~~l~~~~~i~vRD~~S~~~  141 (298)
T TIGR03609        71 GGGSLLQDVTSFRSLLYYLGLMRLARLFGKPVILWGQGIGPLRR---------RLSRWLVRRVLRGCRAISVRDAASYRL  141 (298)
T ss_pred             CCcccccCCcccccHHHHHHHHHHHHHcCCCEEEEecccCCcCC---------HHHHHHHHHHHccCCEEEEeCHHHHHH
Confidence            532111          1 11234567789999887777654321         122355677889999999977777777


Q ss_pred             HHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEeccc---ccccHHHHHHHHHhC---CCcEE
Q 009759          280 LEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG---VEKSLDFLKRVMDRL---PEARI  353 (526)
Q Consensus       280 l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~---~~Kg~~~li~a~~~l---~~~~l  353 (526)
                      +++.+.    ++.+.+   |+...-+......      ....++..|++.-+-.   ....++.+.+++..+   .+.++
T Consensus       142 l~~~g~----~i~~~~---D~a~~l~~~~~~~------~~~~~~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v  208 (298)
T TIGR03609       142 LKRLGI----PAELAA---DPVWLLPPEPWPG------GEPLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFV  208 (298)
T ss_pred             HHHhCC----CceEeC---ChhhhCCCCcccc------cccCCCCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeE
Confidence            776543    455444   3332221111000      0112334454443321   122345566666554   35666


Q ss_pred             EEEeC--CccHHHHHHHhcCC--CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeC
Q 009759          354 AFIGD--GPYREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       354 ~ivG~--g~~~~~l~~l~~~~--~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~  422 (526)
                      +++..  ..+.+..+++....  +..+....+.+|+..++++||++|--..     -..+=|+.+|+|+|+-.
T Consensus       209 ~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~Rl-----H~~I~A~~~gvP~i~i~  276 (298)
T TIGR03609       209 LFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRL-----HALILAAAAGVPFVALS  276 (298)
T ss_pred             EEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEech-----HHHHHHHHcCCCEEEee
Confidence            66553  23333333333322  2223355566899999999999884432     24566999999999764

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=97.79  E-value=0.017  Score=57.49  Aligned_cols=95  Identities=14%  Similarity=0.109  Sum_probs=61.3

Q ss_pred             CCcEEEEEecc-ccccc--HHHHHHHHHhC--CCcEEEEEeCCccHHHHHHHhcCC------C-eEEecccChhhHHHHH
Q 009759          322 DKPLIVHVGRL-GVEKS--LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM------P-AVFTGMLLGEELSQAY  389 (526)
Q Consensus       322 ~~~~i~~vG~l-~~~Kg--~~~li~a~~~l--~~~~l~ivG~g~~~~~l~~l~~~~------~-V~~~g~v~~~~l~~~~  389 (526)
                      +..+++..|.- .+.|.  .+.+.++++.+  .+++++++|...+.+..++..+..      + +.+.|..+-.++..++
T Consensus       180 ~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~ali  259 (348)
T PRK10916        180 RPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVILI  259 (348)
T ss_pred             CCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHHH
Confidence            34455566653 35554  33444444444  368899999765555555543322      1 4566777778999999


Q ss_pred             HcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          390 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       390 ~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                      +.||++|..-     .+.+-=|.|.|+|+|+-
T Consensus       260 ~~a~l~I~nD-----TGp~HlAaA~g~P~val  286 (348)
T PRK10916        260 AACKAIVTND-----SGLMHVAAALNRPLVAL  286 (348)
T ss_pred             HhCCEEEecC-----ChHHHHHHHhCCCEEEE
Confidence            9999999543     23455599999999975

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=97.74  E-value=0.0073  Score=59.54  Aligned_cols=266  Identities=14%  Similarity=0.117  Sum_probs=136.8

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCC--CeEEEEEeCCCCCc--cccCceeccccccCCCccccccchhccc
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMG--DEVMVVTTHEGVPQ--EFYGAKLIGSRSFPCPWYQKVPLSLALS  193 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (526)
                      .|||+++-..     .=|--.....+.+.|++..  .++++++......-  ....+.  .+.....   .+....+...
T Consensus         1 ~~kIliir~~-----~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~~~i~~~~p~I~--~vi~~~~---~~~~~~~~~~   70 (334)
T COG0859           1 MMKILVIRLS-----KLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGFAPILKLNPEID--KVIIIDK---KKKGLGLKER   70 (334)
T ss_pred             CceEEEEecc-----chhHHHhHHHHHHHHHHHCCCCEEEEEeccchHHHHhcChHhh--hhccccc---cccccchHHH
Confidence            3899998642     2355566788899999985  77777776543111  111111  1111010   0000234455


Q ss_pred             HHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCC
Q 009759          194 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS  273 (526)
Q Consensus       194 ~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S  273 (526)
                      ..+.+.+++.++|+|+.-....-   ...+....++|..+......              ....+.......  .-....
T Consensus        71 ~~l~~~lr~~~yD~vidl~~~~k---sa~l~~~~~~~~r~g~~~~~--------------~r~~~~~~~~~~--~~~~~~  131 (334)
T COG0859          71 LALLRTLRKERYDAVIDLQGLLK---SALLALLLGIPFRIGFDKKS--------------ARELLLNKFYPR--LDKPEG  131 (334)
T ss_pred             HHHHHHhhccCCCEEEECcccHH---HHHHHHHhCCCccccccccc--------------chhHHHHHhhhc--cCcccc
Confidence            67888899889999987653222   22233455666544322100              000112222222  222223


Q ss_pred             hhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEe-ccccccc--HHHHHHHHHhC--
Q 009759          274 VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG-RLGVEKS--LDFLKRVMDRL--  348 (526)
Q Consensus       274 ~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG-~l~~~Kg--~~~li~a~~~l--  348 (526)
                      +...+.+.......  .....+  .....+............+.. ...+.+++..| +....|.  .+.+.+.++.+  
T Consensus       132 ~~~~~~~~~l~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~  206 (334)
T COG0859         132 QHVVERYLALLEDL--GLYPPP--EPQLDFPLPRPPIELAKNLAK-FDRPYIVINPGASRGSAKRWPLEHYAELAELLIA  206 (334)
T ss_pred             hhHHHHHHHHHHHh--cCCCCC--CCccCcccccCHHHHHHHHHh-cCCCeEEEeccccccccCCCCHHHHHHHHHHHHH
Confidence            33334333332100  000000  111111111111111111111 11345566677 5546665  33444444444  


Q ss_pred             CCcEEEEEeCCccHHHHHHHhcCCC--eEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeC
Q 009759          349 PEARIAFIGDGPYREELEKMFTGMP--AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       349 ~~~~l~ivG~g~~~~~l~~l~~~~~--V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~  422 (526)
                      ...++++.|...+.+..+++.+..+  +.+.|..+-+++..+++.||++|.+..     +.+-=|.|.|+|+|+--
T Consensus       207 ~~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l~I~~DS-----g~~HlAaA~~~P~I~iy  277 (334)
T COG0859         207 KGYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADLVIGNDS-----GPMHLAAALGTPTIALY  277 (334)
T ss_pred             CCCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCEEEccCC-----hHHHHHHHcCCCEEEEE
Confidence            2478999998766666666666553  238888888999999999999996542     34555999999999764

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=97.72  E-value=0.006  Score=60.31  Aligned_cols=95  Identities=14%  Similarity=0.139  Sum_probs=62.7

Q ss_pred             CCcEEEEEec-cccccc--HHHHHHHHHhC--CCcEEEEEeCCccHHHHHHHhcCC--C-eEEecccChhhHHHHHHcCc
Q 009759          322 DKPLIVHVGR-LGVEKS--LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM--P-AVFTGMLLGEELSQAYASGD  393 (526)
Q Consensus       322 ~~~~i~~vG~-l~~~Kg--~~~li~a~~~l--~~~~l~ivG~g~~~~~l~~l~~~~--~-V~~~g~v~~~~l~~~~~~aD  393 (526)
                      +..+++..|. ..+.|.  .+.+.++++.+  .+.+++++|...+.+..+++....  + +.+.|..+-.++..+++.||
T Consensus       174 ~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~~a~  253 (334)
T TIGR02195       174 RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLIALAK  253 (334)
T ss_pred             CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHHHhCC
Confidence            3445566665 335554  33444554444  368899999766655555544332  2 34678777789999999999


Q ss_pred             EEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          394 VFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       394 v~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                      ++|..-     .+.+-=|.|.|+|+|+-
T Consensus       254 l~I~~D-----SGp~HlAaA~~~P~i~l  276 (334)
T TIGR02195       254 AVVTND-----SGLMHVAAALNRPLVAL  276 (334)
T ss_pred             EEEeeC-----CHHHHHHHHcCCCEEEE
Confidence            999543     23455588999999975

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=97.71  E-value=0.0053  Score=58.95  Aligned_cols=80  Identities=21%  Similarity=0.203  Sum_probs=54.3

Q ss_pred             HHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCC---C-eEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHH
Q 009759          338 LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGM---P-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  413 (526)
Q Consensus       338 ~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~---~-V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma  413 (526)
                      +..+++.+..- +++++++|...+.+..+++.+..   + +.+.|..+-.|+..+++.||++|.+-     ...+--|.+
T Consensus       142 ~~~l~~~l~~~-~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l~I~~D-----sg~~HlA~a  215 (279)
T cd03789         142 FAALADRLLAR-GARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADLVVTND-----SGPMHLAAA  215 (279)
T ss_pred             HHHHHHHHHHC-CCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCEEEeeC-----CHHHHHHHH
Confidence            34444444433 78999999766655555554431   2 45677777789999999999999653     234445679


Q ss_pred             cCCcEEEeCC
Q 009759          414 SGIPVVGVRA  423 (526)
Q Consensus       414 ~G~PvI~~~~  423 (526)
                      .|+|+|+--.
T Consensus       216 ~~~p~i~l~g  225 (279)
T cd03789         216 LGTPTVALFG  225 (279)
T ss_pred             cCCCEEEEEC
Confidence            9999987643

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]

Probab=97.67  E-value=0.067  Score=52.46  Aligned_cols=313  Identities=16%  Similarity=0.165  Sum_probs=155.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCC--CeEEEEEeCCCCCccccCceeccccccCCCcccc-ccchhc----
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMG--DEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQK-VPLSLA----  191 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----  191 (526)
                      ||++++... . ....|-+..+..+.+.|+++-  .+|.+++..+....  .......-+......... .....+    
T Consensus         1 m~~~L~g~~-g-~gN~Gdeail~all~~l~~~~~~~~~~~~~~~p~~i~--~p~~~~~~p~~~~~~l~g~~k~v~R~~~k   76 (385)
T COG2327           1 MKALLLGYY-G-FGNIGDEAILKALLDMLRRLNPDAKVLVMGRRPPVIV--DPVFLSANPEGSAAGLNGRVKSVLRRRLK   76 (385)
T ss_pred             CeeEEEeee-c-CCCcccHHHHHHHHHHHHhhCcccceeeeecCCcccc--cceeecCCcccCchhhhHHHHHHHHHhhc
Confidence            678777653 2 445678888899999998764  56666655442111  000000000000000000 000000    


Q ss_pred             --ccHHHHHHHHhcCCCEEEECCCc----------hHHHH-HHHHHHhcCCCEEEEEecCCcccccccccccccchHHHH
Q 009759          192 --LSPRIISEVARFKPDIIHASSPG----------IMVFG-ALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLV  258 (526)
Q Consensus       192 --~~~~l~~~l~~~~pDiV~~~~~~----------~~~~~-~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~  258 (526)
                        ....+...+.  +.|++++.+..          ...+. .+.+++..++|+++.-|+..|...         ...+++
T Consensus        77 ~~~~~~il~~l~--~~d~~I~~Gg~l~~d~~~~~~~~~~~~~~~la~l~~kp~~~~g~svGP~~~---------~~s~~~  145 (385)
T COG2327          77 HPGLVSILSALG--KADLIIIGGGGLLQDVTSSRSIIYYGGSILLARLAGKPTFFFGQSVGPLKH---------PLSRQL  145 (385)
T ss_pred             cccHHHHHHHhh--hCCEEEEcCcccccCccccceehhhHHHHHHHHHcCCCEEEEeccCCCccC---------HHHHHH
Confidence              0011222233  77888774321          11222 256778899999999988665432         223466


Q ss_pred             HHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEeccccccc-
Q 009759          259 IKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKS-  337 (526)
Q Consensus       259 ~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg-  337 (526)
                      ....++.+..+++=.+.-.+.+...+.    +.....   |+.+.-+.........  ......+.+.+..-.+.+.+. 
T Consensus       146 ~~~~~~~~s~i~vRD~~S~~llk~~gi----~a~l~~---D~Af~L~~~~~~~~~~--~~~~~~~~~~i~lr~~~~~~t~  216 (385)
T COG2327         146 LNYVLGGCSAISVRDPVSYELLKQLGI----NARLVT---DPAFLLPASSQNATAS--DVEAREKTVAITLRGLHPDNTA  216 (385)
T ss_pred             HHHHhcCCcEEEEecHHhHHHHHHcCC----CeEeec---Ccceeccccccccccc--ccccccceEEEEecccCCchhh
Confidence            777888899999888888888886653    222222   4443332211110000  001222333344434433222 


Q ss_pred             -------HHHHHHHHHhCC--C--cEEEEEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCC
Q 009759          338 -------LDFLKRVMDRLP--E--ARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESE  402 (526)
Q Consensus       338 -------~~~li~a~~~l~--~--~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e  402 (526)
                             +..+++-++...  .  ++++-.+...+......+....    ++.+..--..+++...+++||++|-.-   
T Consensus       217 ~~~~~~~v~~~l~~~~~~~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R---  293 (385)
T COG2327         217 QRSILKYVNEALDLVERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMR---  293 (385)
T ss_pred             hHHHHHHHHHHHHHHHHhhhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeeh---
Confidence                   223333332221  2  2333333333333333333222    444433222367778999999998332   


Q ss_pred             CCcHHHHHHHHcCCcEEEeCCC----CCCceecccCCCceeEe--eCCCCHHHHHHHHHHhhhC-HHHHH
Q 009759          403 TLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYL--FNPGDLDDCLSKLEPLLYN-QELRE  465 (526)
Q Consensus       403 ~~~~~ilEAma~G~PvI~~~~g----g~~e~v~~~~~~~~g~~--~~~~d~~~la~ai~~ll~d-~~~~~  465 (526)
                       + -.++=|++.|+|+|+-...    ++.+.+     +-.++.  ..+.|.+.+.+...+.+.+ ++.++
T Consensus       294 -~-HsaI~al~~g~p~i~i~Y~~K~~~l~~~~-----gl~~~~~~i~~~~~~~l~~~~~e~~~~~~~~~~  356 (385)
T COG2327         294 -L-HSAIMALAFGVPAIAIAYDPKVRGLMQDL-----GLPGFAIDIDPLDAEILSAVVLERLTKLDELRE  356 (385)
T ss_pred             -h-HHHHHHHhcCCCeEEEeecHHHHHHHHHc-----CCCcccccCCCCchHHHHHHHHHHHhccHHHHh
Confidence             2 2456699999999987653    232322     223333  3455777888877777663 44333

>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes

Probab=97.60  E-value=0.00052  Score=64.80  Aligned_cols=81  Identities=15%  Similarity=0.023  Sum_probs=57.4

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccc------c------ccccccccchHHHHHHHHhhcCcEEEe
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI------P------RYTFSWLVKPMWLVIKFLHRAADLTLV  271 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~ad~ii~  271 (526)
                      +.|++|+.+.++.++.+.+.+...|+|++++.|+.+....      .      ......+.+.+..+-+..++.||.|++
T Consensus       172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~~  251 (268)
T PF11997_consen  172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRITP  251 (268)
T ss_pred             CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeecc
Confidence            5699999999999998999999999999999999643210      0      011112223344566778999999999


Q ss_pred             CChhHHHHHHHhc
Q 009759          272 PSVAIGKDLEAAR  284 (526)
Q Consensus       272 ~S~~~~~~l~~~~  284 (526)
                      ..+..++.=.+.|
T Consensus       252 l~~~n~~~q~~~G  264 (268)
T PF11997_consen  252 LYEYNREWQIELG  264 (268)
T ss_pred             cchhhHHHHHHhC
Confidence            9997555444433

It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=97.44  E-value=0.0037  Score=63.52  Aligned_cols=153  Identities=14%  Similarity=0.115  Sum_probs=100.1

Q ss_pred             cEEEEEecc-cccccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCC-C
Q 009759          324 PLIVHVGRL-GVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSE-S  401 (526)
Q Consensus       324 ~~i~~vG~l-~~~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~-~  401 (526)
                      ...+..|.- .-++|-+..++++.+.-+++-.|.+.......+-.     -|.-+|.++.+|+..+++.+.++|-... +
T Consensus       278 ~~AlVyGK~~~~w~~k~~~l~~l~~~~eih~tV~~~~~~~~~~P~-----~V~NHG~l~~~ef~~lL~~akvfiGlGfP~  352 (559)
T PF15024_consen  278 NQALVYGKERYMWKGKEKYLDVLHKYMEIHGTVYDEPQRPPNVPS-----FVKNHGILSGDEFQQLLRKAKVFIGLGFPY  352 (559)
T ss_pred             ceeEEEccchhhhcCcHHHHHHHHhhcEEEEEeccCCCCCcccch-----hhhhcCcCCHHHHHHHHHhhhEeeecCCCC
Confidence            344444543 44678888888887765666666553321112221     2667999999999999999999993322 2


Q ss_pred             CCCcHHHHHHHHcCCcEEEeCCCCC---------------Ccee------cccCCCceeEeeCCCCHHHHHHHHHHhhhC
Q 009759          402 ETLGLVVLEAMSSGIPVVGVRAGGI---------------PDII------PEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  460 (526)
Q Consensus       402 e~~~~~ilEAma~G~PvI~~~~gg~---------------~e~v------~~~~~~~~g~~~~~~d~~~la~ai~~ll~d  460 (526)
                      |  |-+.+||+|+|+|.|-......               +++-      ...-.....+.++.+|.+++.+||.++++.
T Consensus       353 E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~~n~~~v~~Avk~il~~  430 (559)
T PF15024_consen  353 E--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDINNSTEVEAAVKAILAT  430 (559)
T ss_pred             C--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhc
Confidence            3  3478999999999986643211               1110      000123456788889999999999999886


Q ss_pred             HHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Q 009759          461 QELRETMGQAARQEM-EKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       461 ~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~  493 (526)
                      +.         .-++ -+|+.+.+.+++- .+.+
T Consensus       431 ~v---------~Py~P~efT~egmLeRv~-~~ie  454 (559)
T PF15024_consen  431 PV---------EPYLPYEFTCEGMLERVN-ALIE  454 (559)
T ss_pred             CC---------CCcCCcccCHHHHHHHHH-HHHH
Confidence            42         2344 4799999988884 4443

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.43  E-value=0.025  Score=56.30  Aligned_cols=96  Identities=14%  Similarity=0.149  Sum_probs=61.6

Q ss_pred             CCcEEEEEeccccccc--HHHHHHHHHhC--CCcEEEEEeCCc--cHHHHHHHhcC---CC-eEEecccChhhHHHHHHc
Q 009759          322 DKPLIVHVGRLGVEKS--LDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTG---MP-AVFTGMLLGEELSQAYAS  391 (526)
Q Consensus       322 ~~~~i~~vG~l~~~Kg--~~~li~a~~~l--~~~~l~ivG~g~--~~~~l~~l~~~---~~-V~~~g~v~~~~l~~~~~~  391 (526)
                      ++.+++..|.-.+.|.  .+.+.++++.+  .+.+++++|...  +.+..+++.+.   .+ +.+.|..+-.++..+++.
T Consensus       183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~  262 (352)
T PRK10422        183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDH  262 (352)
T ss_pred             CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHh
Confidence            4556677776555554  33445554444  368888887532  22222333332   22 557788877999999999


Q ss_pred             CcEEEecCCCCCCcHHHHHHHHcCCcEEEeC
Q 009759          392 GDVFVMPSESETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       392 aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~  422 (526)
                      ||++|..-     .+.+-=|.|.|+|+|+--
T Consensus       263 a~l~v~nD-----SGp~HlAaA~g~P~v~lf  288 (352)
T PRK10422        263 AQLFIGVD-----SAPAHIAAAVNTPLICLF  288 (352)
T ss_pred             CCEEEecC-----CHHHHHHHHcCCCEEEEE
Confidence            99999543     234555889999999763

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]

Probab=97.43  E-value=0.0076  Score=64.41  Aligned_cols=255  Identities=17%  Similarity=0.132  Sum_probs=154.8

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  283 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~  283 (526)
                      .-|+|++|+++.+....++..+..++++-+..|..++...--.....     +......+-.+|.+-..+...+..+...
T Consensus       140 ~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi~r~lp~-----r~eIl~gll~~~~i~f~t~d~arhFls~  214 (732)
T KOG1050|consen  140 EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEIYRCLPV-----RKEILRGLLYDDLLGFHTDDYARHFLST  214 (732)
T ss_pred             CCCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHHHHhccc-----HHHHHHhhhccCccccccccHHHHHHHH
Confidence            77999999987776655555555667777888887764322111111     1112223445666555554444433220


Q ss_pred             ------------cc-------cCCCcEEEeecCCCCCCCCCCccc---HHHHHhhcCCCCCCcEEEEEecccccccHHHH
Q 009759          284 ------------RV-------TAANKIRIWKKGVDSESFHPRFRS---SEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL  341 (526)
Q Consensus       284 ------------~~-------~~~~ki~vi~ngid~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~l  341 (526)
                                  ++       .....+..+|-|+|...+......   ..-..++.....++.+++.+-+++.-||+..=
T Consensus       215 c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~K  294 (732)
T KOG1050|consen  215 CSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLK  294 (732)
T ss_pred             HHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHH
Confidence                        00       012345567778877766433221   11122222223477788888899999997655


Q ss_pred             HHHHHhC----C----CcEEEEEeC-----CccHHHHHHH----hcCC----------C-eEEecccChhhHHHHHHcCc
Q 009759          342 KRVMDRL----P----EARIAFIGD-----GPYREELEKM----FTGM----------P-AVFTGMLLGEELSQAYASGD  393 (526)
Q Consensus       342 i~a~~~l----~----~~~l~ivG~-----g~~~~~l~~l----~~~~----------~-V~~~g~v~~~~l~~~~~~aD  393 (526)
                      +.++.++    |    ++.++.+..     +...++++..    ....          . +.+...++..++.+++..+|
T Consensus       295 l~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vae  374 (732)
T KOG1050|consen  295 LLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAE  374 (732)
T ss_pred             HHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhh
Confidence            5555443    3    344444432     2211222221    1111          1 34567788899999999999


Q ss_pred             EEEecCCCCCCcHHHHHHHHcC----CcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHH
Q 009759          394 VFVMPSESETLGLVVLEAMSSG----IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  468 (526)
Q Consensus       394 v~v~ps~~e~~~~~ilEAma~G----~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~  468 (526)
                      +.+..+..+|..++.+|+.+|.    .+.|.+..-|..+.+     +....++.+.|.++++.+|..+++..+.-.+++
T Consensus       375 v~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl-----~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r  448 (732)
T KOG1050|consen  375 VCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTL-----EDAAIVVNPWDGDEFAILISKALTMSDEERELR  448 (732)
T ss_pred             heeecccccccchhhhHHHHhhcccCCceEEeeeccccccc-----cccCEEECCcchHHHHHHHHHHhhcCHHHHhhc
Confidence            9999999999999999999885    556777666666665     334567888999999999999998655444443

>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria

Probab=97.42  E-value=0.00068  Score=58.82  Aligned_cols=148  Identities=20%  Similarity=0.188  Sum_probs=79.3

Q ss_pred             HCCCeEEEEEeCCCCCccccCceeccccccCCCccccc------cc----hhcccHHHHHHHH-hcCCCEEEECCCchHH
Q 009759          149 EMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKV------PL----SLALSPRIISEVA-RFKPDIIHASSPGIMV  217 (526)
Q Consensus       149 ~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~l~~~l~-~~~pDiV~~~~~~~~~  217 (526)
                      +.||+|.+++........ .+++.+....-........      ..    .......+.++.+ .+.||||++|..... 
T Consensus         1 q~gh~v~fl~~~~~~~~~-~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H~GWGe-   78 (171)
T PF12000_consen    1 QRGHEVVFLTERKRPPIP-PGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFVPDVIIAHPGWGE-   78 (171)
T ss_pred             CCCCEEEEEecCCCCCCC-CCcEEEEeCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEcCCcch-
Confidence            369999999954432222 4555544333211111111      11    1111122222222 357899999974222 


Q ss_pred             HHHHHHHH-hcCCCEEEEEecCCcccc------cccccc---cccchHH-HHHHHHhhcCcEEEeCChhHHHHHHHhccc
Q 009759          218 FGALIIAK-LLCVPIVMSYHTHVPVYI------PRYTFS---WLVKPMW-LVIKFLHRAADLTLVPSVAIGKDLEAARVT  286 (526)
Q Consensus       218 ~~~~~~~~-~~~~p~v~~~h~~~~~~~------~~~~~~---~~~~~~~-~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~  286 (526)
                        .++++. ..++|++.++--.+....      +.....   ......+ ......+..||..+++|.+.+..+-..+. 
T Consensus        79 --~Lflkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~fP~~~r-  155 (171)
T PF12000_consen   79 --TLFLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQFPAEFR-  155 (171)
T ss_pred             --hhhHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhCCHHHH-
Confidence              223333 348888765543221111      111111   1111112 23445678899999999999998877753 


Q ss_pred             CCCcEEEeecCCCCCCC
Q 009759          287 AANKIRIWKKGVDSESF  303 (526)
Q Consensus       287 ~~~ki~vi~ngid~~~~  303 (526)
                        +|+.||.-|||++.+
T Consensus       156 --~kI~VihdGiDt~~~  170 (171)
T PF12000_consen  156 --SKISVIHDGIDTDRF  170 (171)
T ss_pred             --cCcEEeecccchhhc
Confidence              699999999998754

This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.

>PLN03004 UDP-glycosyltransferase

Probab=97.41  E-value=0.0027  Score=64.71  Aligned_cols=138  Identities=14%  Similarity=0.098  Sum_probs=87.7

Q ss_pred             CCCcEEEEEeccc--ccccHHHHHHHHHhCCCcEEEEEeCCc------------cHHHHHHHhcCCCeEEecccChhhHH
Q 009759          321 PDKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFIGDGP------------YREELEKMFTGMPAVFTGMLLGEELS  386 (526)
Q Consensus       321 ~~~~~i~~vG~l~--~~Kg~~~li~a~~~l~~~~l~ivG~g~------------~~~~l~~l~~~~~V~~~g~v~~~~l~  386 (526)
                      ++..+++.+|+..  ..+-+..+..+++..+.--+..+....            ..+.+++..++.++.+.+|+|+.+  
T Consensus       269 ~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~--  346 (451)
T PLN03004        269 EKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP--  346 (451)
T ss_pred             CCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH--
Confidence            3456677888873  345577788888887653333333210            112344445556899999998766  


Q ss_pred             HHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeC-----CCCHHHHHHHHHHh
Q 009759          387 QAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFN-----PGDLDDCLSKLEPL  457 (526)
Q Consensus       387 ~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~-----~~d~~~la~ai~~l  457 (526)
                       +++.+++..+-+  .+.-++++||+++|+|+|+....+    ....+.  +.-+.|+.++     .-+.++++++|.++
T Consensus       347 -iL~H~~v~~FvT--H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~--~~~g~g~~l~~~~~~~~~~e~l~~av~~v  421 (451)
T PLN03004        347 -VLNHKAVGGFVT--HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIV--DEIKIAISMNESETGFVSSTEVEKRVQEI  421 (451)
T ss_pred             -HhCCCccceEec--cCcchHHHHHHHcCCCEEeccccccchhhHHHHH--HHhCceEEecCCcCCccCHHHHHHHHHHH
Confidence             577888733222  344568999999999999987543    222330  1225666554     23789999999999


Q ss_pred             hhCHHHHH
Q 009759          458 LYNQELRE  465 (526)
Q Consensus       458 l~d~~~~~  465 (526)
                      +.++..++
T Consensus       422 m~~~~~r~  429 (451)
T PLN03004        422 IGECPVRE  429 (451)
T ss_pred             hcCHHHHH
Confidence            98755433

>PLN02554 UDP-glycosyltransferase family protein

Probab=97.34  E-value=0.018  Score=59.73  Aligned_cols=135  Identities=11%  Similarity=0.106  Sum_probs=80.2

Q ss_pred             CCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEEeCCc------------------cHHHHHHHhcCCCeEEecccC
Q 009759          322 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGP------------------YREELEKMFTGMPAVFTGMLL  381 (526)
Q Consensus       322 ~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~ivG~g~------------------~~~~l~~l~~~~~V~~~g~v~  381 (526)
                      +..+++.+|++..  .+-+..++.+++..+. +|+.+-.++                  ..+.+.+... .++.+.+|+|
T Consensus       274 ~svvyvsfGS~~~~~~~~~~~la~~l~~~~~-~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~-~~g~v~~W~P  351 (481)
T PLN02554        274 KSVVFLCFGSMGGFSEEQAREIAIALERSGH-RFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTK-DIGKVIGWAP  351 (481)
T ss_pred             CcEEEEeccccccCCHHHHHHHHHHHHHcCC-CeEEEEcCCcccccccccccccchhhhCChHHHHHhc-cCceEEeeCC
Confidence            3456678888633  4467888888888754 544432110                  0112222222 2567789998


Q ss_pred             hhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----C-ceecccCCCceeEeeC-------------
Q 009759          382 GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----P-DIIPEDQDGKIGYLFN-------------  443 (526)
Q Consensus       382 ~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~-e~v~~~~~~~~g~~~~-------------  443 (526)
                      +.++... .+++++|    ..+.-++++||+.+|+|+|+....+-    . ..+   +.-+.|..+.             
T Consensus       352 Q~~iL~H-~~v~~Fv----tH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v---~~~g~Gv~l~~~~~~~~~~~~~~  423 (481)
T PLN02554        352 QVAVLAK-PAIGGFV----THCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMV---EELGLAVEIRKYWRGDLLAGEME  423 (481)
T ss_pred             HHHHhCC-cccCccc----ccCccchHHHHHHcCCCEEecCccccchhhHHHHH---HHhCceEEeeccccccccccccC
Confidence            7654221 4445555    33445689999999999999876431    1 122   2334455442             


Q ss_pred             CCCHHHHHHHHHHhhh-CHHHHHH
Q 009759          444 PGDLDDCLSKLEPLLY-NQELRET  466 (526)
Q Consensus       444 ~~d~~~la~ai~~ll~-d~~~~~~  466 (526)
                      .-+.+++.++|.+++. +++.+++
T Consensus       424 ~~~~e~l~~av~~vm~~~~~~r~~  447 (481)
T PLN02554        424 TVTAEEIERGIRCLMEQDSDVRKR  447 (481)
T ss_pred             eEcHHHHHHHHHHHhcCCHHHHHH
Confidence            1278999999999996 5544443

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=97.21  E-value=0.1  Score=51.12  Aligned_cols=97  Identities=14%  Similarity=0.084  Sum_probs=62.3

Q ss_pred             CCCcEEEEEeccccccc--HHHHHHHHHhC--CCcEEEEEeCCc-cHHHHHHHhcCC-CeEEecccChhhHHHHHHcCcE
Q 009759          321 PDKPLIVHVGRLGVEKS--LDFLKRVMDRL--PEARIAFIGDGP-YREELEKMFTGM-PAVFTGMLLGEELSQAYASGDV  394 (526)
Q Consensus       321 ~~~~~i~~vG~l~~~Kg--~~~li~a~~~l--~~~~l~ivG~g~-~~~~l~~l~~~~-~V~~~g~v~~~~l~~~~~~aDv  394 (526)
                      +++.++++.|.-...|.  .+.+.++++.+  .+.+++++|.++ +.+..+++.+.. +..+.|..+-.++..+++.||+
T Consensus       178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~ali~~a~l  257 (319)
T TIGR02193       178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVAALLAGADA  257 (319)
T ss_pred             CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHHHHHHcCCE
Confidence            34556677775455555  34555555444  367888875444 334444444322 3456787777899999999999


Q ss_pred             EEecCCCCCCcHHHHHHHHcCCcEEEeC
Q 009759          395 FVMPSESETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       395 ~v~ps~~e~~~~~ilEAma~G~PvI~~~  422 (526)
                      +|..-     ...+-=|.|.|+|+|+--
T Consensus       258 ~I~~D-----Sgp~HlAaa~g~P~i~lf  280 (319)
T TIGR02193       258 VVGVD-----TGLTHLAAALDKPTVTLY  280 (319)
T ss_pred             EEeCC-----ChHHHHHHHcCCCEEEEE
Confidence            99553     234555889999999753

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=97.16  E-value=0.028  Score=55.73  Aligned_cols=96  Identities=14%  Similarity=0.157  Sum_probs=60.6

Q ss_pred             CCcEEEEEeccccccc--HHHHHHHHHhC--CCcEEEEEeCCc--cHHHHHHHhcC---CC-eEEecccChhhHHHHHHc
Q 009759          322 DKPLIVHVGRLGVEKS--LDFLKRVMDRL--PEARIAFIGDGP--YREELEKMFTG---MP-AVFTGMLLGEELSQAYAS  391 (526)
Q Consensus       322 ~~~~i~~vG~l~~~Kg--~~~li~a~~~l--~~~~l~ivG~g~--~~~~l~~l~~~---~~-V~~~g~v~~~~l~~~~~~  391 (526)
                      +..+++..|.-.+.|.  .+.+.+.++.+  .+.+++++|...  +.+..++....   .+ +.+.|..+-.|+..+++.
T Consensus       181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~  260 (344)
T TIGR02201       181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDH  260 (344)
T ss_pred             CCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHh
Confidence            3445566665445554  34444444444  368899998543  22223333322   22 446788777899999999


Q ss_pred             CcEEEecCCCCCCcHHHHHHHHcCCcEEEeC
Q 009759          392 GDVFVMPSESETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       392 aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~  422 (526)
                      ||++|..-     ++.+-=|.|.|+|+|+--
T Consensus       261 a~l~Vs~D-----SGp~HlAaA~g~p~v~Lf  286 (344)
T TIGR02201       261 ARLFIGVD-----SVPMHMAAALGTPLVALF  286 (344)
T ss_pred             CCEEEecC-----CHHHHHHHHcCCCEEEEE
Confidence            99999553     244555999999999763

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=97.08  E-value=0.34  Score=47.52  Aligned_cols=96  Identities=13%  Similarity=0.090  Sum_probs=60.2

Q ss_pred             CcEEEEEeccccccc--HHHHHHHHHhC--CCcEEEEE-eCCccHHHHHHHhcCC-CeEEecccChhhHHHHHHcCcEEE
Q 009759          323 KPLIVHVGRLGVEKS--LDFLKRVMDRL--PEARIAFI-GDGPYREELEKMFTGM-PAVFTGMLLGEELSQAYASGDVFV  396 (526)
Q Consensus       323 ~~~i~~vG~l~~~Kg--~~~li~a~~~l--~~~~l~iv-G~g~~~~~l~~l~~~~-~V~~~g~v~~~~l~~~~~~aDv~v  396 (526)
                      +.+++..|.-...|.  .+.+.+++..+  .+.++++. |...+.+..+++.+.. ++.+.|..+-.|+..+++.||++|
T Consensus       179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali~~a~l~I  258 (322)
T PRK10964        179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVLAGAKAVV  258 (322)
T ss_pred             CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHHHhCCEEE
Confidence            334444554334443  33444444444  36788886 6444444445544432 466778887789999999999999


Q ss_pred             ecCCCCCCcHHHHHHHHcCCcEEEeCC
Q 009759          397 MPSESETLGLVVLEAMSSGIPVVGVRA  423 (526)
Q Consensus       397 ~ps~~e~~~~~ilEAma~G~PvI~~~~  423 (526)
                      ..-     .+.+-=|.|+|+|+|+--.
T Consensus       259 ~nD-----SGp~HlA~A~g~p~valfG  280 (322)
T PRK10964        259 SVD-----TGLSHLTAALDRPNITLYG  280 (322)
T ss_pred             ecC-----CcHHHHHHHhCCCEEEEEC
Confidence            543     2345569999999997643

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=97.08  E-value=0.089  Score=50.95  Aligned_cols=239  Identities=16%  Similarity=0.107  Sum_probs=126.4

Q ss_pred             chHHHHHHHHHHHHHC-CCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHHHhcCCCEEEECCC
Q 009759          135 GYKNRFQNFIKYLREM-GDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSP  213 (526)
Q Consensus       135 G~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiV~~~~~  213 (526)
                      |...+...|+++|... ++++.-+........            +  +.... .............+..-.||+|+..+.
T Consensus         2 Gh~~Q~~GLa~aL~~~~~~~~~~v~~~~~~~~------------l--p~~~~-~~~~~~~~~~~~~~~~~~pdLiIsaGr   66 (311)
T PF06258_consen    2 GHENQSLGLAEALGRLTPYEIKRVDVRRPWRW------------L--PRLLP-APLRALLKPFSPALEPPWPDLIISAGR   66 (311)
T ss_pred             chHHHHHHHHHHhcCccCcceeEeccccchhh------------c--ccccc-chHHHhhhcccccccCCCCcEEEECCC
Confidence            7889999999999874 677766654331000            0  00000 000000111112233347999999886


Q ss_pred             chHHHHHHHHHHhcCC--CEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcE
Q 009759          214 GIMVFGALIIAKLLCV--PIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKI  291 (526)
Q Consensus       214 ~~~~~~~~~~~~~~~~--p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki  291 (526)
                      ..... ...+++..+.  +.|+..+-..                      .....|.+|++.++-        .....++
T Consensus        67 ~t~~~-~~~l~r~~gg~~~~V~i~~P~~----------------------~~~~FDlvi~p~HD~--------~~~~~Nv  115 (311)
T PF06258_consen   67 RTAPA-ALALRRASGGRTKTVQIMDPRL----------------------PPRPFDLVIVPEHDR--------LPRGPNV  115 (311)
T ss_pred             chHHH-HHHHHHHcCCCceEEEEcCCCC----------------------CccccCEEEECcccC--------cCCCCce
Confidence            55443 4445555555  4444332111                      135689999988761        1122344


Q ss_pred             EEe---ecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccc--cHH---HHHHHHHhC---CCcEEEEEeCCc
Q 009759          292 RIW---KKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK--SLD---FLKRVMDRL---PEARIAFIGDGP  360 (526)
Q Consensus       292 ~vi---~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~K--g~~---~li~a~~~l---~~~~l~ivG~g~  360 (526)
                      ...   +|.++.+....  .......++.. .+.+.+.+.+|.-+..-  +.+   .+++.+..+   .+..+.|..+..
T Consensus       116 l~t~ga~~~i~~~~l~~--a~~~~~~~~~~-l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRR  192 (311)
T PF06258_consen  116 LPTLGAPNRITPERLAE--AAAAWAPRLAA-LPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRR  192 (311)
T ss_pred             EecccCCCcCCHHHHHH--HHHhhhhhhcc-CCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCC
Confidence            332   23333322211  11112222321 34555667888643322  222   333333322   347888888653


Q ss_pred             c----HHHHHHHhcCC-CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC
Q 009759          361 Y----REELEKMFTGM-PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG  425 (526)
Q Consensus       361 ~----~~~l~~l~~~~-~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg  425 (526)
                      -    .+.+++..+.. .+.+...-+..-+..+|+.||.++++..   .-..+.||++.|+||.+-...+
T Consensus       193 Tp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~  259 (311)
T PF06258_consen  193 TPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG  259 (311)
T ss_pred             CcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence            3    33444444322 4645554455568899999999998743   2346889999999999887765

The function of this family is unknown.

>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane []

Probab=97.06  E-value=0.0072  Score=52.83  Aligned_cols=134  Identities=21%  Similarity=0.207  Sum_probs=76.6

Q ss_pred             CchHHHHHHHHHHH--HHCCCeEEEEEeCCCCCccc----cC--------ceeccccccCCCccccccchhcccHHHHHH
Q 009759          134 SGYKNRFQNFIKYL--REMGDEVMVVTTHEGVPQEF----YG--------AKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       134 gG~~~~~~~l~~~L--~~~G~~V~vi~~~~~~~~~~----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      ||+-..+..|.+.+  ....++..+++..+......    ..        ..+.+......+........+........+
T Consensus         8 GGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~~~~~~~~~~~~r~r~v~q~~~~~~~~~l~~~~~~~~i   87 (170)
T PF08660_consen    8 GGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKSSSKRHKILEIPRAREVGQSYLTSIFTTLRAFLQSLRI   87 (170)
T ss_pred             cHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHhccccceeeccceEEEechhhHhhHHHHHHHHHHHHHH
Confidence            89999999999999  22356777777665433220    00        011111111111222222233344456667


Q ss_pred             HHhcCCCEEEECCCchHHHHHHHHHHhc------CCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCC
Q 009759          200 VARFKPDIIHASSPGIMVFGALIIAKLL------CVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS  273 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~~~~~~~~~~~~------~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S  273 (526)
                      +.+.+||+|+++++..... ..++++..      +.++|+..--.- .    ...+       .--+.++..+|.+++.-
T Consensus        88 l~r~rPdvii~nGpg~~vp-~~~~~~l~~~~~~~~~kiIyIES~aR-v----~~lS-------lTGklly~~aD~f~VQW  154 (170)
T PF08660_consen   88 LRRERPDVIISNGPGTCVP-VCLAAKLLRLLGLRGSKIIYIESFAR-V----KTLS-------LTGKLLYPFADRFIVQW  154 (170)
T ss_pred             HHHhCCCEEEEcCCceeeH-HHHHHHHHHHhhccCCcEEEEEeeee-c----CCCc-------hHHHHHHHhCCEEEEcC
Confidence            7788999999999865433 34455666      888887432110 0    0000       22455677899999999


Q ss_pred             hhHHHHH
Q 009759          274 VAIGKDL  280 (526)
Q Consensus       274 ~~~~~~l  280 (526)
                      +.+++.+
T Consensus       155 ~~l~~~y  161 (170)
T PF08660_consen  155 EELAEKY  161 (170)
T ss_pred             HHHHhHC
Confidence            8887764

>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2

Probab=97.04  E-value=0.0019  Score=64.47  Aligned_cols=187  Identities=16%  Similarity=0.132  Sum_probs=87.9

Q ss_pred             cEEEEEeccC--------CCCccCchHHHHHHHHHHHHHC--------CC----eEEEEEeCCCC---------CccccC
Q 009759          119 RRIALFVEPS--------PFSYVSGYKNRFQNFIKYLREM--------GD----EVMVVTTHEGV---------PQEFYG  169 (526)
Q Consensus       119 mkIliv~~~~--------p~~~~gG~~~~~~~l~~~L~~~--------G~----~V~vi~~~~~~---------~~~~~~  169 (526)
                      -+|++++.+.        ..|+.||--.++..++++|.+.        |-    +|.+++.--..         .+...+
T Consensus       273 f~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~g  352 (550)
T PF00862_consen  273 FNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGTTCNQRLEKVSG  352 (550)
T ss_dssp             SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCGGGTSSEEEETT
T ss_pred             EEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCCCccccccccCC
Confidence            3788886542        3477889889999999999753        43    47777742111         011111


Q ss_pred             ---ceeccccccCCC-----ccccccch---hcccHHHHHHH-H--hcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEE
Q 009759          170 ---AKLIGSRSFPCP-----WYQKVPLS---LALSPRIISEV-A--RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSY  235 (526)
Q Consensus       170 ---~~~~~~~~~~~~-----~~~~~~~~---~~~~~~l~~~l-~--~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~  235 (526)
                         ..+++++.-+..     +..+...+   -.+...+.+.+ +  ..+||+||.|... ..+.+.+++.+.|+|.+.+.
T Consensus       353 t~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~~PdlI~GnYsD-gnlvA~LLs~~lgv~~~~ia  431 (550)
T PF00862_consen  353 TENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQGKPDLIIGNYSD-GNLVASLLSRKLGVTQCFIA  431 (550)
T ss_dssp             ESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS--SEEEEEHHH-HHHHHHHHHHHHT-EEEEE-
T ss_pred             CCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCCCCcEEEeccCc-chHHHHHHHhhcCCceehhh
Confidence               222222222211     11111111   11112222222 2  2589999999754 34556778899999999999


Q ss_pred             ecCCcccccccccccc-------cchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcc---------------------cC
Q 009759          236 HTHVPVYIPRYTFSWL-------VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARV---------------------TA  287 (526)
Q Consensus       236 h~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~---------------------~~  287 (526)
                      |.....-.......|.       .......+...++.||.||+.+......-....+                     .-
T Consensus       432 HsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vF  511 (550)
T PF00862_consen  432 HSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIAGQKDTVGQYESHKAFTLPGLYRVVNGIDVF  511 (550)
T ss_dssp             SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHHB-SSSBHTTGGGSSEEETTTEEEEES--TT
T ss_pred             hccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhcCCccccCCccchhhcchHhHHhhhcccccc
Confidence            9854322111111111       1112244567889999999988765542111111                     12


Q ss_pred             CCcEEEeecCCCCCCCCCC
Q 009759          288 ANKIRIWKKGVDSESFHPR  306 (526)
Q Consensus       288 ~~ki~vi~ngid~~~~~~~  306 (526)
                      ..|+.+++.|+|...+-|-
T Consensus       512 dPkfNiv~PGad~~iyFpy  530 (550)
T PF00862_consen  512 DPKFNIVSPGADESIYFPY  530 (550)
T ss_dssp             -TTEEE------TTTS--T
T ss_pred             CCcccccCCCCCcceecCC
Confidence            3567777777777766554

4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.00  E-value=0.32  Score=45.67  Aligned_cols=243  Identities=15%  Similarity=0.121  Sum_probs=128.2

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      |||+++         ||.+. -..+++.|.+.||+|.+.+................+           .........+..
T Consensus         1 m~ILvl---------GGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v-----------~~g~l~~~~l~~   59 (256)
T TIGR00715         1 MTVLLM---------GGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTV-----------HTGALDPQELRE   59 (256)
T ss_pred             CeEEEE---------echHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceE-----------EECCCCHHHHHH
Confidence            688777         55454 889999999999999998876543322211100000           000111235778


Q ss_pred             HHHhcCCCEEEECCCchH---HHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChh
Q 009759          199 EVARFKPDIIHASSPGIM---VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVA  275 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~~~~---~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~  275 (526)
                      ++++.++|+|+--...+.   ...+...++..++|++-.....+.                       ...+.+.+.|-.
T Consensus        60 ~l~~~~i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~eR~~~~-----------------------~~~~~~~v~~~~  116 (256)
T TIGR00715        60 FLKRHSIDILVDATHPFAAQITTNATAVCKELGIPYVRFERPPLA-----------------------LGKNIIEVPDIE  116 (256)
T ss_pred             HHHhcCCCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEEECCCCC-----------------------CCCCeEEeCCHH
Confidence            899999998766443222   223455778889999865443210                       111223333322


Q ss_pred             HHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCCCcEEEE
Q 009759          276 IGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAF  355 (526)
Q Consensus       276 ~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~i  355 (526)
                      .+..+....                                  ...++.+++..|+    |.+..+...... ..+.+.+
T Consensus       117 ea~~~~~~~----------------------------------~~~~~~i~lttG~----k~l~~f~~~~~~-~~~~~Rv  157 (256)
T TIGR00715       117 EATRVAYQP----------------------------------YLRGKRVFLTAGA----SWLSHFSLSQDE-AVVFVRV  157 (256)
T ss_pred             HHHHHhhhc----------------------------------cccCCcEEEecCc----chHHHHhhccCC-ceEEEEE
Confidence            222111100                                  0012245666664    555555442110 1122333


Q ss_pred             EeCCccHHHHHHHhc----CCC-eEEecccChhhHHHHHHcCcEEEecCC---C-CCCcHHHHHHHHcCCcEEEeCCCCC
Q 009759          356 IGDGPYREELEKMFT----GMP-AVFTGMLLGEELSQAYASGDVFVMPSE---S-ETLGLVVLEAMSSGIPVVGVRAGGI  426 (526)
Q Consensus       356 vG~g~~~~~l~~l~~----~~~-V~~~g~v~~~~l~~~~~~aDv~v~ps~---~-e~~~~~ilEAma~G~PvI~~~~gg~  426 (526)
                      .   +..+.++...+    ..+ |-..|..+.+.=..+++...+-++-+.   . .|+.-|+--|+.+|+|||.-+-+..
T Consensus       158 L---P~~~~l~~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~  234 (256)
T TIGR00715       158 L---PYPQALAQALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQT  234 (256)
T ss_pred             C---CCchhhHHHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC
Confidence            3   22222222211    113 556777776666677776655443333   1 2556789999999999998876643


Q ss_pred             CceecccCCCceeEeeCCCCHHHHHHHHHHhh
Q 009759          427 PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  458 (526)
Q Consensus       427 ~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll  458 (526)
                      ..-.         ..+.  +.+++.+.+.+++
T Consensus       235 ~~~~---------~~~~--~~~el~~~l~~~~  255 (256)
T TIGR00715       235 IPGV---------AIFD--DISQLNQFVARLL  255 (256)
T ss_pred             CCCC---------ccCC--CHHHHHHHHHHhc
Confidence            2110         1233  7788877776653

This enzyme was found to be a monomer by gel filtration.

>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides

Probab=96.99  E-value=0.0076  Score=53.69  Aligned_cols=147  Identities=16%  Similarity=0.104  Sum_probs=73.8

Q ss_pred             CchHHHHHHHHHHHHHC--CCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHHHhcCCCEEEEC
Q 009759          134 SGYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHAS  211 (526)
Q Consensus       134 gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiV~~~  211 (526)
                      -|-...+..|++.|.++  |+.|.+-+......+.....-...+.....|        +.....+.++++..+||+++..
T Consensus        31 vGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~~P--------~D~~~~~~rfl~~~~P~~~i~~  102 (186)
T PF04413_consen   31 VGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQYLP--------LDFPWAVRRFLDHWRPDLLIWV  102 (186)
T ss_dssp             HHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE-----------SSHHHHHHHHHHH--SEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEEeC--------ccCHHHHHHHHHHhCCCEEEEE
Confidence            36567789999999988  7777776654432211100000011111111        2345678889999999999887


Q ss_pred             CCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcE
Q 009759          212 SPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKI  291 (526)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki  291 (526)
                      ...... ..+..++..|+|+++..--..+.....      .+....+.+.+++..|.|.+.|+..++.+.+.+. +.+++
T Consensus       103 EtElWP-nll~~a~~~~ip~~LvNarls~~s~~~------~~~~~~~~r~~l~~f~~i~aqs~~da~r~~~lG~-~~~~v  174 (186)
T PF04413_consen  103 ETELWP-NLLREAKRRGIPVVLVNARLSERSFRR------YRRFPFLFRPLLSRFDRILAQSEADAERFRKLGA-PPERV  174 (186)
T ss_dssp             S----H-HHHHH-----S-EEEEEE--------------------HHHHHHGGG-SEEEESSHHHHHHHHTTT--S--SE
T ss_pred             ccccCH-HHHHHHhhcCCCEEEEeeeeccccchh------hhhhHHHHHHHHHhCCEEEECCHHHHHHHHHcCC-CcceE
Confidence            654332 234456778999887543322211111      1122357888999999999999999999999986 66789


Q ss_pred             EEeec
Q 009759          292 RIWKK  296 (526)
Q Consensus       292 ~vi~n  296 (526)
                      .+..|
T Consensus       175 ~v~Gn  179 (186)
T PF04413_consen  175 HVTGN  179 (186)
T ss_dssp             EE---
T ss_pred             EEeCc
Confidence            88876

Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.

>PLN02207 UDP-glycosyltransferase

Probab=96.97  E-value=0.088  Score=54.08  Aligned_cols=188  Identities=13%  Similarity=0.073  Sum_probs=99.0

Q ss_pred             hhcCcEEEeCChhHHHHH-HHhccc-C-CCcEEEeecCCCCCCC-CCC---cccHHHHHhhcCCCCCCcEEEEEeccc--
Q 009759          263 HRAADLTLVPSVAIGKDL-EAARVT-A-ANKIRIWKKGVDSESF-HPR---FRSSEMRWRLSNGEPDKPLIVHVGRLG--  333 (526)
Q Consensus       263 ~~~ad~ii~~S~~~~~~l-~~~~~~-~-~~ki~vi~ngid~~~~-~~~---~~~~~~~~~~~~~~~~~~~i~~vG~l~--  333 (526)
                      .+.+|.++++|....+.- .+.... + ..++..|..-.....- .+.   ....+...-+....++..+.+.+|+..  
T Consensus       209 ~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~  288 (468)
T PLN02207        209 FTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRL  288 (468)
T ss_pred             cccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCC
Confidence            567899999997766542 222210 1 1245544432211100 010   011222222322233456677788763  


Q ss_pred             ccccHHHHHHHHHhCCCcEEEE-EeCCc------cHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcH
Q 009759          334 VEKSLDFLKRVMDRLPEARIAF-IGDGP------YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGL  406 (526)
Q Consensus       334 ~~Kg~~~li~a~~~l~~~~l~i-vG~g~------~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~  406 (526)
                      ..+-+..+..+++..+. +|+. +....      ..+.+++... .++.+.+|+|+.++... .++.++|    ..+.-+
T Consensus       289 ~~~q~~ela~~l~~~~~-~flW~~r~~~~~~~~~lp~~f~er~~-~~g~i~~W~PQ~~IL~H-~~vg~Fv----TH~Gwn  361 (468)
T PLN02207        289 RGPLVKEIAHGLELCQY-RFLWSLRTEEVTNDDLLPEGFLDRVS-GRGMICGWSPQVEILAH-KAVGGFV----SHCGWN  361 (468)
T ss_pred             CHHHHHHHHHHHHHCCC-cEEEEEeCCCccccccCCHHHHhhcC-CCeEEEEeCCHHHHhcc-cccceee----ecCccc
Confidence            23457788888888865 4433 44211      1123333232 35677799987765333 2233355    223345


Q ss_pred             HHHHHHHcCCcEEEeCCCCCC----ceecccCCCceeEee---------CCCCHHHHHHHHHHhhh
Q 009759          407 VVLEAMSSGIPVVGVRAGGIP----DIIPEDQDGKIGYLF---------NPGDLDDCLSKLEPLLY  459 (526)
Q Consensus       407 ~ilEAma~G~PvI~~~~gg~~----e~v~~~~~~~~g~~~---------~~~d~~~la~ai~~ll~  459 (526)
                      +++||+.+|+|+|+....+-.    .++.  +.-+.|+-+         ..-+.+++.++|.+++.
T Consensus       362 S~~Eai~~GVP~l~~P~~~DQ~~Na~~~~--~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~  425 (468)
T PLN02207        362 SIVESLWFGVPIVTWPMYAEQQLNAFLMV--KELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN  425 (468)
T ss_pred             cHHHHHHcCCCEEecCccccchhhHHHHH--HHhCceEEEecccccccCCcccHHHHHHHHHHHHh
Confidence            889999999999998765322    2220  112344422         11277899999999996

>PLN02167 UDP-glycosyltransferase family protein

Probab=96.75  E-value=0.064  Score=55.55  Aligned_cols=142  Identities=18%  Similarity=0.241  Sum_probs=82.4

Q ss_pred             CCcEEEEEeccc--ccccHHHHHHHHHhCCCcEEEE-EeCCc---------cHHHHHHHhcCCCeEEecccChhhHHHHH
Q 009759          322 DKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAF-IGDGP---------YREELEKMFTGMPAVFTGMLLGEELSQAY  389 (526)
Q Consensus       322 ~~~~i~~vG~l~--~~Kg~~~li~a~~~l~~~~l~i-vG~g~---------~~~~l~~l~~~~~V~~~g~v~~~~l~~~~  389 (526)
                      +..+.+.+|++.  ..+.+..+..+++..+ .+|+. ++...         ..+.+.+...+ +..+.+|+|+.+   ++
T Consensus       280 ~svvyvsfGS~~~~~~~~~~ela~~l~~~~-~~flw~~~~~~~~~~~~~~~lp~~~~er~~~-rg~v~~w~PQ~~---iL  354 (475)
T PLN02167        280 SSVVFLCFGSLGSLPAPQIKEIAQALELVG-CRFLWSIRTNPAEYASPYEPLPEGFMDRVMG-RGLVCGWAPQVE---IL  354 (475)
T ss_pred             CceEEEeecccccCCHHHHHHHHHHHHhCC-CcEEEEEecCcccccchhhhCChHHHHHhcc-CeeeeccCCHHH---Hh
Confidence            446667788763  3445777788888774 45543 44211         11222222222 346679997665   46


Q ss_pred             HcC--cEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCc-----eecccCCCceeEeeC---------CCCHHHHHHH
Q 009759          390 ASG--DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD-----IIPEDQDGKIGYLFN---------PGDLDDCLSK  453 (526)
Q Consensus       390 ~~a--Dv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e-----~v~~~~~~~~g~~~~---------~~d~~~la~a  453 (526)
                      +..  +++|    ..+.-++++||+++|+|+|+....+-..     .+   +.-+.|+.+.         .-+.++++++
T Consensus       355 ~h~~vg~fv----tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~---~~~g~g~~~~~~~~~~~~~~~~~~~l~~a  427 (475)
T PLN02167        355 AHKAIGGFV----SHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMV---KELGLAVELRLDYVSAYGEIVKADEIAGA  427 (475)
T ss_pred             cCcccCeEE----eeCCcccHHHHHHcCCCEEeccccccchhhHHHHH---HHhCeeEEeecccccccCCcccHHHHHHH
Confidence            554  4565    2333458999999999999886543211     12   2334565543         1268899999


Q ss_pred             HHHhhhCH-HHH---HHHHHHHHHHH
Q 009759          454 LEPLLYNQ-ELR---ETMGQAARQEM  475 (526)
Q Consensus       454 i~~ll~d~-~~~---~~~~~~a~~~~  475 (526)
                      |.+++.+. +.+   +++++.+++.+
T Consensus       428 v~~~m~~~~~~r~~a~~~~~~~~~av  453 (475)
T PLN02167        428 VRSLMDGEDVPRKKVKEIAEAARKAV  453 (475)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence            99999753 322   33444444444

>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes

Probab=96.60  E-value=0.058  Score=46.00  Aligned_cols=135  Identities=16%  Similarity=0.051  Sum_probs=72.4

Q ss_pred             cEEEEEeccCCCCccCchH-HHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYK-NRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~-~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (526)
                      |||+++..     ..||.. ..+..+++.+   .|++++++.....-.+.            .   +..  .+   .-..
T Consensus         1 M~ILlle~-----y~ggSHk~~~~~L~~~~---~~~~~lltLP~r~w~WR------------m---Rg~--AL---~~a~   52 (168)
T PF12038_consen    1 MRILLLEP-----YYGGSHKQWADGLAAHS---EHEWTLLTLPARKWHWR------------M---RGA--AL---YFAQ   52 (168)
T ss_pred             CeEEEEcc-----ccccCHHHHHHHHHHhc---cCCEEEEEcCCCccccc------------c---CCC--HH---HHhh
Confidence            89999864     224544 4445555555   48888888643211110            0   000  00   0113


Q ss_pred             HHHHhcCCCEEEECCCc-hHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhH
Q 009759          198 SEVARFKPDIIHASSPG-IMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAI  276 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~~~-~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~  276 (526)
                      +......+|+|++.+-- ...+.++. ....++|.++++|..--.|........-.. +....-...-.||.|+++|...
T Consensus        53 ~~~~~~~~dll~aTsmldLa~l~gL~-p~l~~~p~ilYFHENQl~YP~~~~~~rd~~-~~~~ni~saLaAD~v~FNS~~n  130 (168)
T PF12038_consen   53 QIPLSHSYDLLFATSMLDLATLRGLR-PDLANVPKILYFHENQLAYPVSPGQERDFQ-YGMNNIYSALAADRVVFNSAFN  130 (168)
T ss_pred             ccccccCCCEEEeeccccHHHHHhhc-cCCCCCCEEEEEecCcccCCCCCCcccccc-HHHHHHHHHHhceeeeecchhh
Confidence            34445578999998843 22232322 255689999999985433322211111111 1122233344699999999998


Q ss_pred             HHHHHHh
Q 009759          277 GKDLEAA  283 (526)
Q Consensus       277 ~~~l~~~  283 (526)
                      ++.+.+.
T Consensus       131 r~sFL~~  137 (168)
T PF12038_consen  131 RDSFLDG  137 (168)
T ss_pred             HHHHHHH
Confidence            8877653

It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=96.51  E-value=0.7  Score=43.73  Aligned_cols=181  Identities=14%  Similarity=0.173  Sum_probs=94.6

Q ss_pred             HHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecC
Q 009759          218 FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG  297 (526)
Q Consensus       218 ~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ng  297 (526)
                      ......++..++|+++.-.+..+         ..........+.+++.++.+.+=.+...+.+...+. +. ++.++|..
T Consensus        89 ~~~~~~~~~~~~pv~~~g~g~gp---------~~~~~~~~~~~~~l~~~~~i~vRD~~S~~~l~~~g~-~~-~~~~~~D~  157 (286)
T PF04230_consen   89 LRWLFLAKKLGKPVIILGQGIGP---------FRSEEFKKLLRRILSKADYISVRDEYSYELLKKLGI-SG-NVKLVPDP  157 (286)
T ss_pred             HHHHHHHHhcCCCeEEECceECc---------cCCHHHHHHHHHHHhCCCEEEECCHHHHHHHHHcCC-CC-CcEEEeCc
Confidence            33455677889999886666422         112223356777888899988877777775666553 32 77777654


Q ss_pred             CCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecc---cccccHHHHHHHHHhC--CC--cEEEEEeCC--c-cHHHHHH
Q 009759          298 VDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL---GVEKSLDFLKRVMDRL--PE--ARIAFIGDG--P-YREELEK  367 (526)
Q Consensus       298 id~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l---~~~Kg~~~li~a~~~l--~~--~~l~ivG~g--~-~~~~l~~  367 (526)
                      +-  ...+......       ..........+...   ....-.+.+.+.+..+  ..  +.+......  . .......
T Consensus       158 af--~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (286)
T PF04230_consen  158 AF--LLPPSYPDED-------KSKPKRNYISVSNSPSRNNEEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNE  228 (286)
T ss_pred             hh--hcCccccccc-------ccccccceeeeccccchhhhhHHHHHHHHHHHhhcccceeEEEEeeeccchhhHHHHHh
Confidence            41  1111111100       00001122222221   1222344444555444  22  333333321  1 1111111


Q ss_pred             H---h-cCCC-eEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCC
Q 009759          368 M---F-TGMP-AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  423 (526)
Q Consensus       368 l---~-~~~~-V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~  423 (526)
                      .   . ...+ ..+....+.+++..++++||++|....    - ..+=|+++|+|+|+-+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~Rl----H-~~I~a~~~g~P~i~i~y  284 (286)
T PF04230_consen  229 IDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRL----H-GAILALSLGVPVIAISY  284 (286)
T ss_pred             hhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCC----H-HHHHHHHcCCCEEEEec
Confidence            1   1 1112 444555666899999999999995543    2 34559999999998643

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase []

Probab=96.47  E-value=0.014  Score=51.31  Aligned_cols=87  Identities=21%  Similarity=0.305  Sum_probs=59.1

Q ss_pred             ccHHHHHHHHhcCCCEEEECCCchHHH-HHHHHH-Hhc-CCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcE
Q 009759          192 LSPRIISEVARFKPDIIHASSPGIMVF-GALIIA-KLL-CVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADL  268 (526)
Q Consensus       192 ~~~~l~~~l~~~~pDiV~~~~~~~~~~-~~~~~~-~~~-~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  268 (526)
                      ....+.+++++.+||+|++..+..... ...+.. ... ++|++..+-|..... +               .++...+|.
T Consensus        77 ~~~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H-~---------------~W~~~~~D~  140 (169)
T PF06925_consen   77 FARRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH-P---------------FWIHPGVDR  140 (169)
T ss_pred             HHHHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC-c---------------CeecCCCCE
Confidence            445788899999999999998765444 332322 323 577665555531111 0               113467999


Q ss_pred             EEeCChhHHHHHHHhcccCCCcEEEee
Q 009759          269 TLVPSVAIGKDLEAARVTAANKIRIWK  295 (526)
Q Consensus       269 ii~~S~~~~~~l~~~~~~~~~ki~vi~  295 (526)
                      .++.|+..++.+.+.| .+.+++.+..
T Consensus       141 y~Vase~~~~~l~~~G-i~~~~I~vtG  166 (169)
T PF06925_consen  141 YFVASEEVKEELIERG-IPPERIHVTG  166 (169)
T ss_pred             EEECCHHHHHHHHHcC-CChhHEEEeC
Confidence            9999999999999976 4778887754

; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.35  E-value=0.24  Score=52.74  Aligned_cols=182  Identities=18%  Similarity=0.152  Sum_probs=102.6

Q ss_pred             HhhcCcEEEeCChhHHHHHHH-----hcccCCCcEEEeecCCCCCCCCCCccc---------------------------
Q 009759          262 LHRAADLTLVPSVAIGKDLEA-----ARVTAANKIRIWKKGVDSESFHPRFRS---------------------------  309 (526)
Q Consensus       262 ~~~~ad~ii~~S~~~~~~l~~-----~~~~~~~ki~vi~ngid~~~~~~~~~~---------------------------  309 (526)
                      ++..+..+--+|.--.+.+++     .+.....++.-+.|||....|-.....                           
T Consensus       328 Al~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~  407 (713)
T PF00343_consen  328 ALRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKF  407 (713)
T ss_dssp             HHHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGG
T ss_pred             HHHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHh
Confidence            455666777788766665543     222334689999999999887432100                           


Q ss_pred             ---HHH-------------------HHhhcC-CCCCCcEEEEEecccccccHHH-HHHH---HHh---CC-----CcEEE
Q 009759          310 ---SEM-------------------RWRLSN-GEPDKPLIVHVGRLGVEKSLDF-LKRV---MDR---LP-----EARIA  354 (526)
Q Consensus       310 ---~~~-------------------~~~~~~-~~~~~~~i~~vG~l~~~Kg~~~-li~a---~~~---l~-----~~~l~  354 (526)
                         ..+                   ....+. ..++....+++-|+...|...+ ++..   ..+   .|     .++++
T Consensus       408 ~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~I  487 (713)
T PF00343_consen  408 ADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFI  487 (713)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEE
T ss_pred             hCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEE
Confidence               000                   001121 2556777899999999998777 3332   222   22     46788


Q ss_pred             EEeCC-c---cHHHHHHH-------hcCC-------CeEEecccChhhHHHHHHcCcEEEecCC--CCCCcHHHHHHHHc
Q 009759          355 FIGDG-P---YREELEKM-------FTGM-------PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSS  414 (526)
Q Consensus       355 ivG~g-~---~~~~l~~l-------~~~~-------~V~~~g~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~ilEAma~  414 (526)
                      +.|.. |   ..+++-++       +...       +|.|+...+-.-...++.+|||-+..++  .|..|..-+-+|..
T Consensus       488 FaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N  567 (713)
T PF00343_consen  488 FAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN  567 (713)
T ss_dssp             EE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT
T ss_pred             EeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC
Confidence            88842 1   11222222       1111       4788887766677789999999998776  69999999999999


Q ss_pred             CCcEEEeCCCCCCceecccCCCceeEeeCC
Q 009759          415 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNP  444 (526)
Q Consensus       415 G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~  444 (526)
                      |.+.+++-.|..-|+.... ..++++++..
T Consensus       568 GaL~lstlDG~niEi~e~v-G~eN~fiFG~  596 (713)
T PF00343_consen  568 GALNLSTLDGWNIEIAEAV-GEENIFIFGL  596 (713)
T ss_dssp             T-EEEEESSTCHHHHHHHH--GGGSEEES-
T ss_pred             CCeEEecccchhHHHHHhc-CCCcEEEcCC
Confidence            9999999999888876211 2346777643

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=96.19  E-value=0.39  Score=45.75  Aligned_cols=98  Identities=19%  Similarity=0.184  Sum_probs=60.3

Q ss_pred             CCCCcEEEEEeccccc-----------ccHHHHHHHHHhCCCcEEEEEeCC-----ccHHHHHHHhcCCCeEEecccChh
Q 009759          320 EPDKPLIVHVGRLGVE-----------KSLDFLKRVMDRLPEARIAFIGDG-----PYREELEKMFTGMPAVFTGMLLGE  383 (526)
Q Consensus       320 ~~~~~~i~~vG~l~~~-----------Kg~~~li~a~~~l~~~~l~ivG~g-----~~~~~l~~l~~~~~V~~~g~v~~~  383 (526)
                      ..+++.|++.......           ...+.+.++++..|+.+++|==..     .....+.+.....++.+..  +.-
T Consensus       114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~--~~~  191 (269)
T PF05159_consen  114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIID--DDV  191 (269)
T ss_pred             cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEEC--CCC
Confidence            3456666666655333           123444455556688888774421     1223344433333444432  224


Q ss_pred             hHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          384 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       384 ~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      .+.+++..||.++.-.     +.+-+||+.+|+||++-...
T Consensus       192 ~~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~~  227 (269)
T PF05159_consen  192 NLYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGRA  227 (269)
T ss_pred             CHHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecCc
Confidence            7889999999998543     67999999999999986443

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.18  E-value=0.31  Score=45.65  Aligned_cols=96  Identities=17%  Similarity=0.204  Sum_probs=60.0

Q ss_pred             CCCcEEEEEeccccccc--HHHHHHHHHhCC--CcEEEEEeCCcc--HHHHHHHhcCC---CeEEecccChhhHHHHHHc
Q 009759          321 PDKPLIVHVGRLGVEKS--LDFLKRVMDRLP--EARIAFIGDGPY--REELEKMFTGM---PAVFTGMLLGEELSQAYAS  391 (526)
Q Consensus       321 ~~~~~i~~vG~l~~~Kg--~~~li~a~~~l~--~~~l~ivG~g~~--~~~l~~l~~~~---~V~~~g~v~~~~l~~~~~~  391 (526)
                      ++..+++..|.-.+.|.  .+.+.+.++.+.  ..+++++|.+.+  .+....+....   .+.+.|..+-.++..+++.
T Consensus       104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~  183 (247)
T PF01075_consen  104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISR  183 (247)
T ss_dssp             TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHT
T ss_pred             cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhc
Confidence            44556677777667776  344666666663  368888887655  33344444432   4778888877999999999


Q ss_pred             CcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          392 GDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       392 aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                      ||++|.+-     ...+-=|.|.|+|+|+-
T Consensus       184 a~~~I~~D-----tg~~HlA~a~~~p~v~l  208 (247)
T PF01075_consen  184 ADLVIGND-----TGPMHLAAALGTPTVAL  208 (247)
T ss_dssp             SSEEEEES-----SHHHHHHHHTT--EEEE
T ss_pred             CCEEEecC-----ChHHHHHHHHhCCEEEE
Confidence            99999654     34566699999999986

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=96.07  E-value=0.087  Score=56.04  Aligned_cols=123  Identities=20%  Similarity=0.262  Sum_probs=88.7

Q ss_pred             CCCCcEEEEEecccccccHHHHHHHH----HhC-----CCcEEEEEeCC-c---cHHHHHHHh----c----CCCeEEec
Q 009759          320 EPDKPLIVHVGRLGVEKSLDFLKRVM----DRL-----PEARIAFIGDG-P---YREELEKMF----T----GMPAVFTG  378 (526)
Q Consensus       320 ~~~~~~i~~vG~l~~~Kg~~~li~a~----~~l-----~~~~l~ivG~g-~---~~~~l~~l~----~----~~~V~~~g  378 (526)
                      .++...++++-|+...|...+.+.-+    ..+     |.+.+++.|.. |   ..+.+-+++    +    ..+|.|+.
T Consensus       484 ~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~  563 (750)
T COG0058         484 DPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLP  563 (750)
T ss_pred             CCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeC
Confidence            35677889999999999866654322    222     33566677742 1   112222222    1    23588888


Q ss_pred             ccChhhHHHHHHcCcEEEecCC--CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccC--CCceeEeeCCC
Q 009759          379 MLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ--DGKIGYLFNPG  445 (526)
Q Consensus       379 ~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~--~~~~g~~~~~~  445 (526)
                      ..+-.-...++.+|||-...|.  .|..|..-+-++..|.+.|+|-.|..-|+.   +  .+.|||++...
T Consensus       564 nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~---e~vg~~N~~~fG~~  631 (750)
T COG0058         564 NYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIY---EHVGGENGWIFGET  631 (750)
T ss_pred             CCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHH---HhcCCCceEEeCCc
Confidence            7766666788999999988766  599999999999999999999999988888   5  78899998753

>PRK14986 glycogen phosphorylase; Provisional

Probab=95.95  E-value=0.085  Score=56.81  Aligned_cols=122  Identities=16%  Similarity=0.196  Sum_probs=88.8

Q ss_pred             CCCCcEEEEEecccccccHHH-HHHHHHhC------C-----CcEEEEEeCC-c---cHHHHHH----Hhc---C-----
Q 009759          320 EPDKPLIVHVGRLGVEKSLDF-LKRVMDRL------P-----EARIAFIGDG-P---YREELEK----MFT---G-----  371 (526)
Q Consensus       320 ~~~~~~i~~vG~l~~~Kg~~~-li~a~~~l------~-----~~~l~ivG~g-~---~~~~l~~----l~~---~-----  371 (526)
                      .++...++++-|+...|...+ ++..+.++      |     ..++++.|.. |   ..+.+-+    ..+   .     
T Consensus       540 dp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~  619 (815)
T PRK14986        540 NPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIG  619 (815)
T ss_pred             CcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhc
Confidence            556777888999999999887 55543322      2     4678888842 1   1111111    111   1     


Q ss_pred             --CCeEEecccChhhHHHHHHcCcEEEecCC--CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCC--CceeEeeCC
Q 009759          372 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD--GKIGYLFNP  444 (526)
Q Consensus       372 --~~V~~~g~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~--~~~g~~~~~  444 (526)
                        .+|.|+....-.-...++.+||+-...|+  .|..|..=+-+|..|.+.++|-.|...|+.   ++  +++||++..
T Consensus       620 ~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~---e~vG~eN~~~fG~  695 (815)
T PRK14986        620 DKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML---EHVGEENIFIFGN  695 (815)
T ss_pred             CceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHH---HhcCCCcEEEeCC
Confidence              14788877766667789999999998776  699999999999999999999999988888   54  788998864

>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia

Probab=95.77  E-value=2.1  Score=41.56  Aligned_cols=313  Identities=13%  Similarity=0.114  Sum_probs=172.0

Q ss_pred             ccCchHHHHHHHHHHHHHCC--CeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHHHhcCCCEEE
Q 009759          132 YVSGYKNRFQNFIKYLREMG--DEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIH  209 (526)
Q Consensus       132 ~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiV~  209 (526)
                      ...|...-+.-|+..|++..  ++|.++..+...... .+. ......++             ...+.+.+.  +.||++
T Consensus        16 W~NGi~QN~~fL~~lL~qs~~v~~V~Lvn~g~~~~~~-~~~-~~~~~~~~-------------~~~~~~~~~--~lDVlI   78 (364)
T PF10933_consen   16 WENGINQNCIFLAMLLQQSPRVESVVLVNGGDGNPIP-AAL-MLDLLDVP-------------LVDFDDAID--ELDVLI   78 (364)
T ss_pred             hhhchhhHHHHHHHHHhhCCCcceEEEEECCCCCcCC-ccc-ccccCCCc-------------eecHHHhcc--cCCEEE
Confidence            34677778888999998876  799999875542111 000 00000000             012223322  789998


Q ss_pred             ECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccc-cccccccchHHHHHHHHhhcCcEEEeCChhH---HHHHHHhcc
Q 009759          210 ASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPR-YTFSWLVKPMWLVIKFLHRAADLTLVPSVAI---GKDLEAARV  285 (526)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~---~~~l~~~~~  285 (526)
                      --+.....- -....+..|.++|....+..-...-. ..+..-.     -..+.-...|.|++.-+..   ...+.... 
T Consensus        79 Emg~ql~~~-~~~~~~~~G~KvV~y~~GndYv~~~E~~lF~k~~-----~~~f~~~~yD~VW~lPq~~~~~~~yl~~l~-  151 (364)
T PF10933_consen   79 EMGAQLDPE-WLDYMRARGGKVVSYRCGNDYVMDIESMLFNKPS-----GHLFNGAPYDEVWTLPQFENTCAPYLETLH-  151 (364)
T ss_pred             EccCccCHH-HHHHHHHcCCeEEEEeCCchHHHHhhHHhcCCCC-----CccCCCCCCceeEeccchhhhchHHHHHHh-
Confidence            876543322 22345778999999888743211000 0000000     0001124568887655432   33444443 


Q ss_pred             cCCCcEEEeecCCCCCCCCCCcccHH-HHHhhcCCC--CCCcEEEEEeccccccc---HHHHHHHH-HhCCC-cEEEEEe
Q 009759          286 TAANKIRIWKKGVDSESFHPRFRSSE-MRWRLSNGE--PDKPLIVHVGRLGVEKS---LDFLKRVM-DRLPE-ARIAFIG  357 (526)
Q Consensus       286 ~~~~ki~vi~ngid~~~~~~~~~~~~-~~~~~~~~~--~~~~~i~~vG~l~~~Kg---~~~li~a~-~~l~~-~~l~ivG  357 (526)
                        ...+.++|.--++-++........ -..+++..+  ....+-+|=-+++-.|.   .-++++.+ +.-|+ +..+.+-
T Consensus       152 --r~Pv~~vP~iWsP~F~~~~~~~l~~~~~~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~  229 (364)
T PF10933_consen  152 --RCPVRVVPHIWSPRFLDQRIAQLPEHGLRFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVT  229 (364)
T ss_pred             --cCCceeeCccCCchhHHHHHHhhhhcCCccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEe
Confidence              357778876444433321111000 000122211  22233344455666665   23344444 44455 4444444


Q ss_pred             CC---ccHHHHHHHhc------CCCeEEecccChhhHHHHHHc-CcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC
Q 009759          358 DG---PYREELEKMFT------GMPAVFTGMLLGEELSQAYAS-GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP  427 (526)
Q Consensus       358 ~g---~~~~~l~~l~~------~~~V~~~g~v~~~~l~~~~~~-aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~  427 (526)
                      +.   .+...+..++.      .....|.|..   ++..+++. .|++|.--...+...--+|++.-|=|.|-.     .
T Consensus       230 Nt~~~ke~~~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHN-----S  301 (364)
T PF10933_consen  230 NTYHLKEHPTFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHN-----S  301 (364)
T ss_pred             cchhhhcCHHHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccC-----c
Confidence            22   12223333333      2247788887   56666655 599886666667788899999999999953     3


Q ss_pred             ceecccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHHHHHHHHHHHHhCCHHHH
Q 009759          428 DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYDWRAA  483 (526)
Q Consensus       428 e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~~~a~~~~~~fs~~~~  483 (526)
                      .++     ++.|+.++..|..+=+++|.+++. ....++...+++++.+..++..+-
T Consensus       302 ~~l-----~d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p~n~  353 (364)
T PF10933_consen  302 PLL-----KDVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSPENP  353 (364)
T ss_pred             chh-----cccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCCCCH
Confidence            455     347999999999999999988887 445678888888888876665543

>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=95.66  E-value=1.4  Score=45.57  Aligned_cols=178  Identities=12%  Similarity=0.187  Sum_probs=114.5

Q ss_pred             CCCCcEEEEEeccc--ccccHHHHHHHHHhCCCcEEEEEe-----CCccHHHHHHHhcCC-CeEEecccChhhHHHHHHc
Q 009759          320 EPDKPLIVHVGRLG--VEKSLDFLKRVMDRLPEARIAFIG-----DGPYREELEKMFTGM-PAVFTGMLLGEELSQAYAS  391 (526)
Q Consensus       320 ~~~~~~i~~vG~l~--~~Kg~~~li~a~~~l~~~~l~ivG-----~g~~~~~l~~l~~~~-~V~~~g~v~~~~l~~~~~~  391 (526)
                      +++..+++.+..+.  ..+-++...++++..|+-.|.+.-     .......++++.-+. +|.|..-...+|-..-.+-
T Consensus       756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~L  835 (966)
T KOG4626|consen  756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQL  835 (966)
T ss_pred             CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeeccccchHHHHHhhhh
Confidence            44555555555553  345577778888999987766644     322333333332222 5888877777787888889


Q ss_pred             CcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceeccc--CCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHH
Q 009759          392 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED--QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQ  469 (526)
Q Consensus       392 aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~--~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~  469 (526)
                      +||.+-+-...|. .+-+|.+.+|+|+|+-....++.-+...  ..-+.|-++ ..+.++..+.-.++-.|.+..++++.
T Consensus       836 aDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli-ak~~eEY~~iaV~Latd~~~L~~lr~  913 (966)
T KOG4626|consen  836 ADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI-AKNREEYVQIAVRLATDKEYLKKLRA  913 (966)
T ss_pred             hhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-hhhHHHHHHHHHHhhcCHHHHHHHHH
Confidence            9999865443332 3567899999999975432221111000  011122222 23788899888899899999999888


Q ss_pred             HHHHHH-H--hCCHHHHHHHHHHHHHHHHHHHHH
Q 009759          470 AARQEM-E--KYDWRAATRTIRNEQYNAAIWFWR  500 (526)
Q Consensus       470 ~a~~~~-~--~fs~~~~~~~~~~~ly~~~l~~~~  500 (526)
                      .-+... .  -|+-...+..++ .+|.+.-+.+-
T Consensus       914 ~l~~~r~~splfd~~q~~~~LE-~~y~~MW~~y~  946 (966)
T KOG4626|consen  914 KLRKARASSPLFDTKQYAKGLE-RLYLQMWKKYC  946 (966)
T ss_pred             HHHHHhcCCCccCchHHHHHHH-HHHHHHHHHhc
Confidence            777765 3  499999999996 88888755543

>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins

Probab=95.33  E-value=0.044  Score=41.05  Aligned_cols=54  Identities=19%  Similarity=0.311  Sum_probs=43.3

Q ss_pred             ccchhcccHHHHHHHHhcCCCEEEECCC-chHHHHHHHHHHhcCCCEEEEEecCC
Q 009759          186 VPLSLALSPRIISEVARFKPDIIHASSP-GIMVFGALIIAKLLCVPIVMSYHTHV  239 (526)
Q Consensus       186 ~~~~~~~~~~l~~~l~~~~pDiV~~~~~-~~~~~~~~~~~~~~~~p~v~~~h~~~  239 (526)
                      .+..+.....++.++.+++.||||.|.. ..+...+++-++..|.+.|++-|..+
T Consensus        32 ~Pt~~~~~pl~R~IlirE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTDHSLf   86 (90)
T PF08288_consen   32 LPTLFGSFPLLRNILIRERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTDHSLF   86 (90)
T ss_pred             hHHHHHhhHHHHHHHHHcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeeccccc
Confidence            4445566677888888999999999986 44456678889999999999999865

These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases

Probab=95.30  E-value=0.17  Score=54.60  Aligned_cols=122  Identities=18%  Similarity=0.247  Sum_probs=88.0

Q ss_pred             CCCCcEEEEEecccccccHHH-HHHHHHh---C---C-----CcEEEEEeCC-c---cHHHH-------HHHhcC-----
Q 009759          320 EPDKPLIVHVGRLGVEKSLDF-LKRVMDR---L---P-----EARIAFIGDG-P---YREEL-------EKMFTG-----  371 (526)
Q Consensus       320 ~~~~~~i~~vG~l~~~Kg~~~-li~a~~~---l---~-----~~~l~ivG~g-~---~~~~l-------~~l~~~-----  371 (526)
                      .++....+++-|+...|...+ ++..+.+   +   |     ..++++.|.. |   ..+.+       .+.+..     
T Consensus       527 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~  606 (797)
T cd04300         527 DPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVG  606 (797)
T ss_pred             CCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcC
Confidence            567778899999999999888 5554332   2   3     3678888842 1   11121       121111     


Q ss_pred             --CCeEEecccChhhHHHHHHcCcEEEecCC--CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCC--CceeEeeCC
Q 009759          372 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD--GKIGYLFNP  444 (526)
Q Consensus       372 --~~V~~~g~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~--~~~g~~~~~  444 (526)
                        .+|.|+....-.-...++.+|||-...|+  .|..|..=+-+|..|.+.++|-.|...|+.   ++  +++++++..
T Consensus       607 ~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~---e~vG~eN~fiFG~  682 (797)
T cd04300         607 DKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIA---EEVGEENIFIFGL  682 (797)
T ss_pred             CceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHH---HHhCcCcEEEeCC
Confidence              14788877766677789999999998776  589999999999999999999999888887   44  678888753

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK14985 maltodextrin phosphorylase; Provisional

Probab=95.23  E-value=0.071  Score=57.16  Aligned_cols=122  Identities=17%  Similarity=0.226  Sum_probs=87.0

Q ss_pred             CCCCcEEEEEecccccccHHH-HHHHHHhC------C-----CcEEEEEeCC-c---cHHHH-------HHHhcC-----
Q 009759          320 EPDKPLIVHVGRLGVEKSLDF-LKRVMDRL------P-----EARIAFIGDG-P---YREEL-------EKMFTG-----  371 (526)
Q Consensus       320 ~~~~~~i~~vG~l~~~Kg~~~-li~a~~~l------~-----~~~l~ivG~g-~---~~~~l-------~~l~~~-----  371 (526)
                      .++...++++-|+...|...+ ++..+..+      |     ..++++.|.. |   ..+.+       .+.+++     
T Consensus       526 dp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~  605 (798)
T PRK14985        526 NPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVG  605 (798)
T ss_pred             CchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhC
Confidence            456667788889999999877 55443222      3     3678888842 1   11121       122211     


Q ss_pred             --CCeEEecccChhhHHHHHHcCcEEEecCC--CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCC--CceeEeeCC
Q 009759          372 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD--GKIGYLFNP  444 (526)
Q Consensus       372 --~~V~~~g~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~--~~~g~~~~~  444 (526)
                        .+|.|+....-.-...++.+||+-...|+  .|..|..=+-+|..|.+.|+|-.|...|+.   ++  +++||++..
T Consensus       606 ~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~---e~vG~eN~f~fG~  681 (798)
T PRK14985        606 DKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIA---EQVGEENIFIFGH  681 (798)
T ss_pred             CceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHH---HHhCcCcEEEeCC
Confidence              14888887766677789999999998776  689999999999999999999999888887   43  678888753

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=94.86  E-value=0.11  Score=55.78  Aligned_cols=122  Identities=20%  Similarity=0.224  Sum_probs=87.2

Q ss_pred             CCCCcEEEEEecccccccHHH-HHHHHHhC------C-----CcEEEEEeCC-c---cHHHHHHH----h---cC-----
Q 009759          320 EPDKPLIVHVGRLGVEKSLDF-LKRVMDRL------P-----EARIAFIGDG-P---YREELEKM----F---TG-----  371 (526)
Q Consensus       320 ~~~~~~i~~vG~l~~~Kg~~~-li~a~~~l------~-----~~~l~ivG~g-~---~~~~l~~l----~---~~-----  371 (526)
                      .++....+++-|+...|...+ ++..+..+      |     ..++++.|.. |   ..+.+-++    +   ..     
T Consensus       524 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~  603 (794)
T TIGR02093       524 DPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVG  603 (794)
T ss_pred             CccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhC
Confidence            456677788889999999887 55544322      2     3578888842 1   11222111    1   11     


Q ss_pred             --CCeEEecccChhhHHHHHHcCcEEEecCC--CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCC--CceeEeeCC
Q 009759          372 --MPAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD--GKIGYLFNP  444 (526)
Q Consensus       372 --~~V~~~g~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~--~~~g~~~~~  444 (526)
                        .+|.|+....-.-...++.+||+-...|+  .|..|..=+-+|..|.+.|+|-.|...|+.   ++  ++|++++..
T Consensus       604 ~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~---e~vG~eN~fiFG~  679 (794)
T TIGR02093       604 DKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIR---EEVGAENIFIFGL  679 (794)
T ss_pred             CceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHH---HHhCcccEEEcCC
Confidence              14888887766677789999999998776  589999999999999999999999888887   44  678887753

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]

Probab=94.02  E-value=3.4  Score=41.50  Aligned_cols=221  Identities=10%  Similarity=0.094  Sum_probs=119.6

Q ss_pred             HhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHH-HhhcCC-CCCCcEEEEEecccccc---
Q 009759          262 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMR-WRLSNG-EPDKPLIVHVGRLGVEK---  336 (526)
Q Consensus       262 ~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~-~~~~~~-~~~~~~i~~vG~l~~~K---  336 (526)
                      .....|.+.+.+......+.+.++....++.....+-....+.......... .+..+. +.++.+|+|.-.+....   
T Consensus       145 ~~~~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k~vIlyaPTfr~~~~~~  224 (388)
T COG1887         145 VRNHWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDKKVILYAPTFRDNDVLI  224 (388)
T ss_pred             eeeeeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccCceEEecCCccCCcccc
Confidence            3456788888888887777777766666666555444433333332222221 122222 44688899988876654   


Q ss_pred             c---HHHH--HHHHH-hC--CCcEEEEEeCCccHHHHHHHhcCCCeEEecccC-hhhHHHHHHcCcEEEecCCCCCCcHH
Q 009759          337 S---LDFL--KRVMD-RL--PEARIAFIGDGPYREELEKMFTGMPAVFTGMLL-GEELSQAYASGDVFVMPSESETLGLV  407 (526)
Q Consensus       337 g---~~~l--i~a~~-~l--~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~-~~~l~~~~~~aDv~v~ps~~e~~~~~  407 (526)
                      +   ....  +..+. .+  .++.+++-=.....+..........  +.-.++ ..++.++|..+|++|     .-++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~l~~~~~~ii~k~Hp~is~~~~~~~~~~~--~~~~vs~~~di~dll~~sDiLI-----TDySSv  297 (388)
T COG1887         225 GTQFFNLDIDIEKLKEKLGENEYVIIVKPHPLISDKIDKRYALDD--FVLDVSDNADINDLLLVSDILI-----TDYSSV  297 (388)
T ss_pred             chhhhhhhhhHHHHHHhhccCCeEEEEecChhhhhhhhhhhhccc--eeEecccchhHHHHHhhhCEEE-----eechHH
Confidence            2   2222  22222 22  2444444332211111111111111  222233 379999999999999     556889


Q ss_pred             HHHHHHcCCcEEEeCCC--C---CCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHH
Q 009759          408 VLEAMSSGIPVVGVRAG--G---IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRA  482 (526)
Q Consensus       408 ilEAma~G~PvI~~~~g--g---~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~  482 (526)
                      ..|+|...+|||....-  .   ......+.+....|-++.  +.+++.++|.....+.+...+..+...+.+..+.-.+
T Consensus       298 ~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~--~~~~li~ai~~~~~~~~~~~~k~~~~~~~~~~~~dg~  375 (388)
T COG1887         298 IFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVE--TQEELIDAIKPYDEDGNYDLEKLRVFNDKFNSYEDGR  375 (388)
T ss_pred             HHHHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccc--cHHHHHHHHHhhhcccchhHHHHHHHHHhhccccccc
Confidence            99999999999965221  1   111221112334566666  8889999999988755443333332333333333355


Q ss_pred             HHHHHHHHH
Q 009759          483 ATRTIRNEQ  491 (526)
Q Consensus       483 ~~~~~~~~l  491 (526)
                      ..+++.+.+
T Consensus       376 ss~ri~~~i  384 (388)
T COG1887         376 SSERILKLI  384 (388)
T ss_pred             HHHHHHHHH
Confidence            555554333

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=93.81  E-value=1.1  Score=46.86  Aligned_cols=142  Identities=18%  Similarity=0.202  Sum_probs=82.8

Q ss_pred             CcEEEEEeccc-----ccccHHHHHHHHHhCCCcEEEEEeCCccHHHH-HHHhc--CCCeEEecccChhhHHHHHHcC--
Q 009759          323 KPLIVHVGRLG-----VEKSLDFLKRVMDRLPEARIAFIGDGPYREEL-EKMFT--GMPAVFTGMLLGEELSQAYASG--  392 (526)
Q Consensus       323 ~~~i~~vG~l~-----~~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l-~~l~~--~~~V~~~g~v~~~~l~~~~~~a--  392 (526)
                      ..+++..|...     +.+-...+..+++.++++.|+..=.+.....+ +...+  ..+|...+|+|+.++.  +...  
T Consensus       278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~ll--l~H~~v  355 (496)
T KOG1192|consen  278 SVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLL--LDHPAV  355 (496)
T ss_pred             CeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHh--cCCCcC
Confidence            55666778775     34557778899998877876655433222212 22221  2368888999987765  2222  


Q ss_pred             cEEEecCCCCCCcHHHHHHHHcCCcEEEeCC-CC---CCceecccCCCceeEeeCC-CCHHHHHHHHHHhhhCHHHHHHH
Q 009759          393 DVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GG---IPDIIPEDQDGKIGYLFNP-GDLDDCLSKLEPLLYNQELRETM  467 (526)
Q Consensus       393 Dv~v~ps~~e~~~~~ilEAma~G~PvI~~~~-gg---~~e~v~~~~~~~~g~~~~~-~d~~~la~ai~~ll~d~~~~~~~  467 (526)
                      .++|  + +.|++ +++|++.+|+|+|+... |.   ....+.  +++..+.+... .....+.+++..++.+++..+..
T Consensus       356 ~~Fv--T-HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~--~~g~~~v~~~~~~~~~~~~~~~~~il~~~~y~~~~  429 (496)
T KOG1192|consen  356 GGFV--T-HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLV--RHGGGGVLDKRDLVSEELLEAIKEILENEEYKEAA  429 (496)
T ss_pred             cEEE--E-CCccc-HHHHHHhcCCceecCCccccchhHHHHHH--hCCCEEEEehhhcCcHHHHHHHHHHHcChHHHHHH
Confidence            2333  1 23444 55999999999996543 21   222221  44555555432 22333888999998887765554


Q ss_pred             HHHHH
Q 009759          468 GQAAR  472 (526)
Q Consensus       468 ~~~a~  472 (526)
                      .+-+.
T Consensus       430 ~~l~~  434 (496)
T KOG1192|consen  430 KRLSE  434 (496)
T ss_pred             HHHHH
Confidence            44333

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=92.91  E-value=0.46  Score=46.00  Aligned_cols=70  Identities=17%  Similarity=0.233  Sum_probs=50.1

Q ss_pred             hhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcC-CcEEEeCCC--CCCceecccCCCceeEeeCCCCHHHHHHHHH
Q 009759          383 EELSQAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRAG--GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLE  455 (526)
Q Consensus       383 ~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G-~PvI~~~~g--g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~  455 (526)
                      .+..+.|+++.++++|.-...+..-++|||++| +|||.++.-  ...+++   .-....+.++..+..++.+.|.
T Consensus       228 ~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l---dw~~fsv~v~~~~~~~l~~iL~  300 (302)
T PF03016_consen  228 SEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVL---DWSRFSVRVPEADLPELPEILR  300 (302)
T ss_pred             hHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCccccc---CHHHEEEEECHHHHHHHHHHHh
Confidence            468899999999999887767889999999999 566665422  345555   4455666776666655555554

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=92.08  E-value=0.34  Score=37.99  Aligned_cols=77  Identities=14%  Similarity=0.270  Sum_probs=52.1

Q ss_pred             EEEEeC-CccHHHHHHHhcCCC--eEEe---cccChhh--HHHHHHcCcEEEecCCC---CCCcHHHHHHHHcCCcEEEe
Q 009759          353 IAFIGD-GPYREELEKMFTGMP--AVFT---GMLLGEE--LSQAYASGDVFVMPSES---ETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       353 l~ivG~-g~~~~~l~~l~~~~~--V~~~---g~v~~~~--l~~~~~~aDv~v~ps~~---e~~~~~ilEAma~G~PvI~~  421 (526)
                      ++|+|. ......+++..++.+  ..++   +......  +...+..+|++|++..+   +.+-.+--+|-..|+|++.+
T Consensus         2 vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~   81 (97)
T PF10087_consen    2 VLIVGGREDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYS   81 (97)
T ss_pred             EEEEcCCcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEE
Confidence            566774 456677777777665  3334   3333334  88999999999998764   33444556778889999988


Q ss_pred             CCCCCCce
Q 009759          422 RAGGIPDI  429 (526)
Q Consensus       422 ~~gg~~e~  429 (526)
                      +..+...+
T Consensus        82 ~~~~~~~l   89 (97)
T PF10087_consen   82 RSRGVSSL   89 (97)
T ss_pred             CCCCHHHH
Confidence            76655443

>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group

Probab=90.46  E-value=1  Score=39.89  Aligned_cols=87  Identities=16%  Similarity=0.213  Sum_probs=44.4

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCe--EEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDE--VMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~--V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      |||+++...        .+.....+.++|.+.+++  +..+.++...................... ......-.....+
T Consensus         1 mrI~~~~Sg--------~~~~~~~~l~~l~~~~~~~~iv~Vit~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   71 (181)
T PF00551_consen    1 MRIVFFGSG--------SGSFLKALLEALKARGHNVEIVLVITNPDKPRGRSRAIKNGIPAQVADE-KNFQPRSENDEEL   71 (181)
T ss_dssp             EEEEEEESS--------SSHHHHHHHHHHHTTSSEEEEEEEEESSTTTHHHHHHHHTTHHEEEHHG-GGSSSHHHHHHHH
T ss_pred             CEEEEEEcC--------CCHHHHHHHHHHHhCCCCceEEEEeccccccccccccccCCCCEEeccc-cCCCchHhhhhHH
Confidence            899999752        226678889999999997  44444443322210000000000000000 0000111223467


Q ss_pred             HHHHHhcCCCEEEECCCc
Q 009759          197 ISEVARFKPDIIHASSPG  214 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~  214 (526)
                      .+.+++.+||++++..+.
T Consensus        72 ~~~l~~~~~Dl~v~~~~~   89 (181)
T PF00551_consen   72 LELLESLNPDLIVVAGYG   89 (181)
T ss_dssp             HHHHHHTT-SEEEESS-S
T ss_pred             HHHHHhhccceeehhhhH
Confidence            888999999999998754

Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....

>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]

Probab=89.50  E-value=2.6  Score=35.31  Aligned_cols=90  Identities=21%  Similarity=0.348  Sum_probs=54.7

Q ss_pred             cEEEEEecccccccHHHHHHHH---------HhCCCcEEEE-EeCC-cc-HHHHHHHhcCCCeEEecccChhhHHHHHHc
Q 009759          324 PLIVHVGRLGVEKSLDFLKRVM---------DRLPEARIAF-IGDG-PY-REELEKMFTGMPAVFTGMLLGEELSQAYAS  391 (526)
Q Consensus       324 ~~i~~vG~l~~~Kg~~~li~a~---------~~l~~~~l~i-vG~g-~~-~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~  391 (526)
                      -+++.+|.-.    +|.|+.++         .+..=.+++| +|.| .. .+......+..+..+.||--...+.+.++.
T Consensus         5 ~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~   80 (170)
T KOG3349|consen    5 TVFVTVGTTS----FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRS   80 (170)
T ss_pred             EEEEEecccc----HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhh
Confidence            3567777644    55555433         2222235544 6765 21 122222212335566665444688999999


Q ss_pred             CcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          392 GDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       392 aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                      ||++|    ..+..++++|.+..|+|.|+.
T Consensus        81 AdlVI----sHAGaGS~letL~l~KPlivV  106 (170)
T KOG3349|consen   81 ADLVI----SHAGAGSCLETLRLGKPLIVV  106 (170)
T ss_pred             ccEEE----ecCCcchHHHHHHcCCCEEEE
Confidence            99999    445567999999999998765

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=89.00  E-value=0.48  Score=39.08  Aligned_cols=45  Identities=18%  Similarity=0.212  Sum_probs=31.6

Q ss_pred             hhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC
Q 009759          383 EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP  427 (526)
Q Consensus       383 ~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~  427 (526)
                      +++.+++..+|++|--|..+..--.+-.++.+|+|+|...+|...
T Consensus        59 ~~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~  103 (124)
T PF01113_consen   59 DDLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSD  103 (124)
T ss_dssp             S-HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHH
T ss_pred             hhHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCH
Confidence            568899999999998776555555677788999999988777543

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6

Probab=88.11  E-value=0.82  Score=37.16  Aligned_cols=41  Identities=20%  Similarity=0.356  Sum_probs=27.4

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHE  161 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~  161 (526)
                      |||+|+.+.  .....-.......|+.+.+++||+|.++..+.
T Consensus         1 Mki~fvmDp--i~~i~~~kDTT~alm~eAq~RGhev~~~~~~d   41 (119)
T PF02951_consen    1 MKIAFVMDP--IESIKPYKDTTFALMLEAQRRGHEVFYYEPGD   41 (119)
T ss_dssp             -EEEEEES---GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGG
T ss_pred             CeEEEEeCC--HHHCCCCCChHHHHHHHHHHCCCEEEEEEcCc
Confidence            899999873  33333344678889999999999999998754

3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=87.92  E-value=1.8  Score=37.80  Aligned_cols=40  Identities=15%  Similarity=0.116  Sum_probs=30.5

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF  167 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~  167 (526)
                      |||+++...         +..-..++++..++||+|+-++.+.......
T Consensus         1 mKIaiIgAs---------G~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~   40 (211)
T COG2910           1 MKIAIIGAS---------GKAGSRILKEALKRGHEVTAIVRNASKLAAR   40 (211)
T ss_pred             CeEEEEecC---------chhHHHHHHHHHhCCCeeEEEEeChHhcccc
Confidence            899999652         2444668899999999999999887654443

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=87.61  E-value=23  Score=35.70  Aligned_cols=122  Identities=17%  Similarity=0.195  Sum_probs=66.1

Q ss_pred             CCcEEEEEecccccccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCC
Q 009759          322 DKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES  401 (526)
Q Consensus       322 ~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~  401 (526)
                      ....++++|.   .+-..++.+.+..-.--+++|++..  .+..++++++.+.   ..++.+++..++..+|+++..+..
T Consensus       177 ~~~~vlvIGA---Gem~~lva~~L~~~g~~~i~IaNRT--~erA~~La~~~~~---~~~~l~el~~~l~~~DvVissTsa  248 (414)
T COG0373         177 KDKKVLVIGA---GEMGELVAKHLAEKGVKKITIANRT--LERAEELAKKLGA---EAVALEELLEALAEADVVISSTSA  248 (414)
T ss_pred             ccCeEEEEcc---cHHHHHHHHHHHhCCCCEEEEEcCC--HHHHHHHHHHhCC---eeecHHHHHHhhhhCCEEEEecCC
Confidence            4445677763   2334444454444323466666643  4555566665552   244558999999999999976432


Q ss_pred             --CCCcHH-HHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHH
Q 009759          402 --ETLGLV-VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCL  451 (526)
Q Consensus       402 --e~~~~~-ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la  451 (526)
                        --.+.. +-+++.--...+.-|.+-.+++-+...+-.+.++++-+|.+.++
T Consensus       249 ~~~ii~~~~ve~a~~~r~~~livDiavPRdie~~v~~l~~v~l~~iDDL~~iv  301 (414)
T COG0373         249 PHPIITREMVERALKIRKRLLIVDIAVPRDVEPEVGELPNVFLYTIDDLEEIV  301 (414)
T ss_pred             CccccCHHHHHHHHhcccCeEEEEecCCCCCCccccCcCCeEEEehhhHHHHH
Confidence              222333 33444444445777777666654211122334566544544443

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=86.35  E-value=7.5  Score=30.30  Aligned_cols=73  Identities=19%  Similarity=0.332  Sum_probs=47.1

Q ss_pred             CchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHHHhcCCCEEEECCC
Q 009759          134 SGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSP  213 (526)
Q Consensus       134 gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiV~~~~~  213 (526)
                      ||.+.....+-+.+.+.|.+..+. ...+.....                         ...+...++  ++|+|++...
T Consensus         6 GG~~~~~~~~~~~~~~~G~~~~~h-g~~~~~~~~-------------------------~~~l~~~i~--~aD~VIv~t~   57 (97)
T PF10087_consen    6 GGREDRERRYKRILEKYGGKLIHH-GRDGGDEKK-------------------------ASRLPSKIK--KADLVIVFTD   57 (97)
T ss_pred             cCCcccHHHHHHHHHHcCCEEEEE-ecCCCCccc-------------------------hhHHHHhcC--CCCEEEEEeC
Confidence            787888999999999999999888 222111100                         012333333  7899888543


Q ss_pred             ---chHHHHHHHHHHhcCCCEEEE
Q 009759          214 ---GIMVFGALIIAKLLCVPIVMS  234 (526)
Q Consensus       214 ---~~~~~~~~~~~~~~~~p~v~~  234 (526)
                         +.....+--.++..++|+++.
T Consensus        58 ~vsH~~~~~vk~~akk~~ip~~~~   81 (97)
T PF10087_consen   58 YVSHNAMWKVKKAAKKYGIPIIYS   81 (97)
T ss_pred             CcChHHHHHHHHHHHHcCCcEEEE
Confidence               333444556778889999875

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=85.38  E-value=11  Score=34.70  Aligned_cols=129  Identities=21%  Similarity=0.242  Sum_probs=72.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      |+|+++          |.++.-..+|+.|.+.||+|.++-.+.....++.... .....+..         -.......+
T Consensus         1 m~iiIi----------G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~-~~~~~v~g---------d~t~~~~L~   60 (225)
T COG0569           1 MKIIII----------GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE-LDTHVVIG---------DATDEDVLE   60 (225)
T ss_pred             CEEEEE----------CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh-cceEEEEe---------cCCCHHHHH
Confidence            567666          4557889999999999999999987654322211100 00000100         011123333


Q ss_pred             HHHhcCCCEEEECCC--chHHHHHHHHHHhcCCCEEEE-EecCCcccccccccccccchHHHHHHHHhh-cCcEEEeCCh
Q 009759          199 EVARFKPDIIHASSP--GIMVFGALIIAKLLCVPIVMS-YHTHVPVYIPRYTFSWLVKPMWLVIKFLHR-AADLTLVPSV  274 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~--~~~~~~~~~~~~~~~~p~v~~-~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~ii~~S~  274 (526)
                      .+--.+.|++++...  ......+.+..+.+++|.++. .++...                  .+.+.+ .+|.++.+..
T Consensus        61 ~agi~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~~~~------------------~~~~~~~g~~~ii~Pe~  122 (225)
T COG0569          61 EAGIDDADAVVAATGNDEVNSVLALLALKEFGVPRVIARARNPEH------------------EKVLEKLGADVIISPEK  122 (225)
T ss_pred             hcCCCcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEecCHHH------------------HHHHHHcCCcEEECHHH
Confidence            333347898888553  333444555556678886653 333211                  111111 2789999888


Q ss_pred             hHHHHHHHhcc
Q 009759          275 AIGKDLEAARV  285 (526)
Q Consensus       275 ~~~~~l~~~~~  285 (526)
                      ...+.+.....
T Consensus       123 ~~~~~l~~~i~  133 (225)
T COG0569         123 LAAKRLARLIV  133 (225)
T ss_pred             HHHHHHHHHhc
Confidence            88888877643

>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6

Probab=85.34  E-value=4.6  Score=31.62  Aligned_cols=89  Identities=12%  Similarity=0.105  Sum_probs=47.6

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEE-EeCCCCCccccCceeccccccCCCccccccchhcccHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVV-TTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (526)
                      ||||++.+       |   -+=..++..|.+.-.--.++ .+++.......  ...     .        ....-...+.
T Consensus         1 MkVLviGs-------G---gREHAia~~l~~s~~v~~v~~aPGN~G~~~~~--~~~-----~--------~~~~d~~~l~   55 (100)
T PF02844_consen    1 MKVLVIGS-------G---GREHAIAWKLSQSPSVEEVYVAPGNPGTAELG--KNV-----P--------IDITDPEELA   55 (100)
T ss_dssp             EEEEEEES-------S---HHHHHHHHHHTTCTTEEEEEEEE--TTGGGTS--EEE--------------S-TT-HHHHH
T ss_pred             CEEEEECC-------C---HHHHHHHHHHhcCCCCCEEEEeCCCHHHHhhc--eec-----C--------CCCCCHHHHH
Confidence            89999964       3   34567888887763222333 34433222211  110     0        1223346888


Q ss_pred             HHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEE
Q 009759          198 SEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV  232 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v  232 (526)
                      ++.++.++|+|++.-..+......-..+..|+|++
T Consensus        56 ~~a~~~~idlvvvGPE~pL~~Gl~D~l~~~gi~vf   90 (100)
T PF02844_consen   56 DFAKENKIDLVVVGPEAPLVAGLADALRAAGIPVF   90 (100)
T ss_dssp             HHHHHTTESEEEESSHHHHHTTHHHHHHHTT-CEE
T ss_pred             HHHHHcCCCEEEECChHHHHHHHHHHHHHCCCcEE
Confidence            99999999999997643333222333455677765

3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ....

>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed

Probab=85.18  E-value=3  Score=37.60  Aligned_cols=86  Identities=16%  Similarity=0.279  Sum_probs=45.4

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCC--CeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMG--DEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      |||++++.        |.+..+..+.+++.+.+  ++|.++.++.....-....+..+++.+.... ........+...+
T Consensus         2 ~ki~vl~s--------g~gs~~~~ll~~~~~~~~~~~I~~vvs~~~~~~~~~~a~~~gIp~~~~~~-~~~~~~~~~~~~~   72 (200)
T PRK05647          2 KRIVVLAS--------GNGSNLQAIIDACAAGQLPAEIVAVISDRPDAYGLERAEAAGIPTFVLDH-KDFPSREAFDAAL   72 (200)
T ss_pred             ceEEEEEc--------CCChhHHHHHHHHHcCCCCcEEEEEEecCccchHHHHHHHcCCCEEEECc-cccCchhHhHHHH
Confidence            79999975        33466778888888765  6676655543211110001111121111100 0000011123466


Q ss_pred             HHHHHhcCCCEEEECCC
Q 009759          197 ISEVARFKPDIIHASSP  213 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~  213 (526)
                      .+.+++.+||++++..+
T Consensus        73 ~~~l~~~~~D~iv~~~~   89 (200)
T PRK05647         73 VEALDAYQPDLVVLAGF   89 (200)
T ss_pred             HHHHHHhCcCEEEhHHh
Confidence            78888999999988664

>PRK06849 hypothetical protein; Provisional

Probab=84.61  E-value=2  Score=43.30  Aligned_cols=84  Identities=13%  Similarity=0.167  Sum_probs=49.7

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      .+||||++.         |.....+.+++.|.+.||+|+++............ .+......+.+..    ..-.+...+
T Consensus         3 ~~~~VLI~G---------~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~----d~~~~~~~L   68 (389)
T PRK06849          3 TKKTVLITG---------ARAPAALELARLFHNAGHTVILADSLKYPLSRFSR-AVDGFYTIPSPRW----DPDAYIQAL   68 (389)
T ss_pred             CCCEEEEeC---------CCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-hhhheEEeCCCCC----CHHHHHHHH
Confidence            468998873         33346899999999999999999765422110000 0000011111110    112245678


Q ss_pred             HHHHHhcCCCEEEECCCc
Q 009759          197 ISEVARFKPDIIHASSPG  214 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~  214 (526)
                      .++++++++|+|+.....
T Consensus        69 ~~i~~~~~id~vIP~~e~   86 (389)
T PRK06849         69 LSIVQRENIDLLIPTCEE   86 (389)
T ss_pred             HHHHHHcCCCEEEECChH
Confidence            888999999999987643

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=84.49  E-value=36  Score=31.89  Aligned_cols=220  Identities=14%  Similarity=0.078  Sum_probs=113.8

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc-cCceeccccccCCCccccccchhcccHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF-YGAKLIGSRSFPCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (526)
                      |||+++.         | ..-...+++.|.+.|+ |.+-+......... ......  ..        ....+.....+.
T Consensus         1 m~ILvlg---------G-TtE~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~--~v--------~~G~lg~~~~l~   59 (249)
T PF02571_consen    1 MKILVLG---------G-TTEGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGL--EV--------RVGRLGDEEGLA   59 (249)
T ss_pred             CEEEEEe---------c-hHHHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCc--eE--------EECCCCCHHHHH
Confidence            8998883         2 2446899999999998 55443322111100 000000  00        001111345888


Q ss_pred             HHHHhcCCCEEEECCCchH---HHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCCh
Q 009759          198 SEVARFKPDIIHASSPGIM---VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV  274 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~~~~~---~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~  274 (526)
                      .++++.++++|+=-+.++.   .-.+..+++..++|++-.....+...                     ...+.+.+.|-
T Consensus        60 ~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~eRp~~~~~---------------------~~~~~~~v~~~  118 (249)
T PF02571_consen   60 EFLRENGIDAVIDATHPFAAEISQNAIEACRELGIPYLRFERPSWQPE---------------------PDDNWHYVDSY  118 (249)
T ss_pred             HHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEEcCCcccC---------------------CCCeEEEeCCH
Confidence            9999999998876443222   22355577888999987665533210                     01122222222


Q ss_pred             hHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCCCcEEE
Q 009759          275 AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIA  354 (526)
Q Consensus       275 ~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~  354 (526)
                      ..+-.+...                                    ...+.+++..|+    |.+..+..  ....+.+++
T Consensus       119 ~eA~~~l~~------------------------------------~~~~~iflttGs----k~L~~f~~--~~~~~~r~~  156 (249)
T PF02571_consen  119 EEAAELLKE------------------------------------LGGGRIFLTTGS----KNLPPFVP--APLPGERLF  156 (249)
T ss_pred             HHHHHHHhh------------------------------------cCCCCEEEeCch----hhHHHHhh--cccCCCEEE
Confidence            222211100                                    122345666664    55555554  222233332


Q ss_pred             E--EeCCccHHHHHHHh-cCCC-eEEecccChhhHHHHHHcCcE--EEec-CCCCCCcHHHHHHHHcCCcEEEeCCCCCC
Q 009759          355 F--IGDGPYREELEKMF-TGMP-AVFTGMLLGEELSQAYASGDV--FVMP-SESETLGLVVLEAMSSGIPVVGVRAGGIP  427 (526)
Q Consensus       355 i--vG~g~~~~~l~~l~-~~~~-V~~~g~v~~~~l~~~~~~aDv--~v~p-s~~e~~~~~ilEAma~G~PvI~~~~gg~~  427 (526)
                      +  +=..+.     .+. ...+ +...|..+.+.=..+++...+  +|.= |-..|+.-|+--|..+|+|||.-.-+...
T Consensus       157 ~RvLp~~~~-----~~g~~~~~iia~~GPfs~e~n~al~~~~~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~  231 (249)
T PF02571_consen  157 ARVLPTPES-----ALGFPPKNIIAMQGPFSKELNRALFRQYGIDVLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEP  231 (249)
T ss_pred             EEECCCccc-----cCCCChhhEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC
Confidence            2  221111     110 1112 556777776655677776544  4432 22337778999999999999988766544

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent

Probab=84.29  E-value=5.4  Score=35.60  Aligned_cols=87  Identities=20%  Similarity=0.246  Sum_probs=46.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCC--eEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGD--EVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~--~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      |||++++.        |.+..+..+++++.+.+.  +|.++.++..........+..+++.+.... ......-.+-..+
T Consensus         1 ~riail~s--------g~gs~~~~ll~~~~~~~l~~~I~~vi~~~~~~~~~~~A~~~gip~~~~~~-~~~~~~~~~~~~~   71 (190)
T TIGR00639         1 KRIVVLIS--------GNGSNLQAIIDACKEGKIPASVVLVISNKPDAYGLERAAQAGIPTFVLSL-KDFPSREAFDQAI   71 (190)
T ss_pred             CeEEEEEc--------CCChhHHHHHHHHHcCCCCceEEEEEECCccchHHHHHHHcCCCEEEECc-cccCchhhhhHHH
Confidence            68988875        444667888898988765  666555554221111001111111111000 0111111223467


Q ss_pred             HHHHHhcCCCEEEECCCc
Q 009759          197 ISEVARFKPDIIHASSPG  214 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~  214 (526)
                      .+.+++.++|++++..+.
T Consensus        72 ~~~l~~~~~D~iv~~~~~   89 (190)
T TIGR00639        72 IEELRAHEVDLVVLAGFM   89 (190)
T ss_pred             HHHHHhcCCCEEEEeCcc
Confidence            888999999999987753

In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.

>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]

Probab=83.84  E-value=7.6  Score=36.09  Aligned_cols=94  Identities=19%  Similarity=0.262  Sum_probs=50.0

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCc---------------eeccccccC
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGA---------------KLIGSRSFP  179 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~---------------~~~~~~~~~  179 (526)
                      ....++|++|..+ |    .=-+..+-..+..+.++|++|.+++...+......+.               .+.++....
T Consensus         7 ~~~~~~vL~v~aH-P----DDe~~g~ggtla~~~~~G~~V~v~~lT~Ge~g~~~~~~~l~~~R~~E~~~a~~~LGv~~~~   81 (237)
T COG2120           7 MLDPLRVLVVFAH-P----DDEEIGCGGTLAKLAARGVEVTVVCLTLGEAGENGGELELGAVRRAEARAAARVLGVRETI   81 (237)
T ss_pred             cccCCcEEEEecC-C----cchhhccHHHHHHHHHCCCeEEEEEccCCcccccCCccchHHHHHHHHHHHHHhcCCCcce
Confidence            4556899888653 3    1222333445566689999999999765433222111               122222111


Q ss_pred             CCccc---cccchhcccHHHHHHHHhcCCCEEEECCC
Q 009759          180 CPWYQ---KVPLSLALSPRIISEVARFKPDIIHASSP  213 (526)
Q Consensus       180 ~~~~~---~~~~~~~~~~~l~~~l~~~~pDiV~~~~~  213 (526)
                      .-.+.   ...........+.+++.+.+||+|+++.+
T Consensus        82 ~l~~~~~~~~~~~~~~~~~L~~ii~~~~P~~V~t~~~  118 (237)
T COG2120          82 FLGFPDTGADADPEEITGALVAIIRRLRPDVVFTPYP  118 (237)
T ss_pred             ecCCCccccccChHHHHHHHHHHHHHhCCCEEEecCC
Confidence            00011   01111223346788888889998887654

>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed

Probab=83.72  E-value=6.6  Score=38.01  Aligned_cols=43  Identities=14%  Similarity=0.063  Sum_probs=30.5

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeC
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTH  160 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~  160 (526)
                      +++||++++... .+...-.-.....+.++|.+.||+|.++...
T Consensus         3 ~~~~v~~~~g~~-~~~~~~~~~s~~~i~~al~~~g~~v~~i~~~   45 (304)
T PRK01372          3 MFGKVAVLMGGT-SAEREVSLNSGAAVLAALREAGYDAHPIDPG   45 (304)
T ss_pred             CCcEEEEEeCCC-CCCceEeHHhHHHHHHHHHHCCCEEEEEecC
Confidence            346899887542 2433333345689999999999999998644

>PF12996 DUF3880: DUF based on E

Probab=83.65  E-value=2  Score=32.15  Aligned_cols=64  Identities=14%  Similarity=0.091  Sum_probs=48.5

Q ss_pred             HHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEeccc
Q 009759          261 FLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLG  333 (526)
Q Consensus       261 ~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~  333 (526)
                      .+...+|.|++......+.+++.+.   .++..+|-++++..+.+.......      ...-.-.|.|||++-
T Consensus        14 ~i~~~~~~iFt~D~~~~~~~~~~G~---~~V~yLPLAa~~~~~~p~~~~~~~------~~~~~~dIsFVG~~y   77 (79)
T PF12996_consen   14 SIANSYDYIFTFDRSFVEEYRNLGA---ENVFYLPLAANPERFRPIPVDPEE------RKKYECDISFVGSLY   77 (79)
T ss_pred             hhCCCCCEEEEECHHHHHHHHHcCC---CCEEEccccCCHHHhCcccCCccc------ccccCCCEEEeCcCc
Confidence            4567899999999999999999764   699999999999999887432110      022344699999864

rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].

>PRK13789 phosphoribosylamine--glycine ligase; Provisional

Probab=82.99  E-value=6.7  Score=40.08  Aligned_cols=93  Identities=16%  Similarity=0.002  Sum_probs=50.4

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEe-CCCCCccccCceeccccccCCCccccccchhcccHH
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTT-HEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      +.||||++..       |   .+-..|+..|.+.++-+.+++. ++........  .   ....        ....-...
T Consensus         3 ~~~kvLviG~-------g---~rehal~~~~~~~~~~~~~~~~pgn~g~~~~~~--~---~~~~--------~~~~d~~~   59 (426)
T PRK13789          3 VKLKVLLIGS-------G---GRESAIAFALRKSNLLSELKVFPGNGGFPDDEL--L---PADS--------FSILDKSS   59 (426)
T ss_pred             CCcEEEEECC-------C---HHHHHHHHHHHhCCCCCEEEEECCchHHhcccc--c---cccC--------cCcCCHHH
Confidence            4599999943       2   4567789999998865555553 2221111000  0   0000        11223457


Q ss_pred             HHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEE
Q 009759          196 IISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV  232 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v  232 (526)
                      +.+++++.++|+|++...........-.....|+|++
T Consensus        60 l~~~a~~~~iD~Vv~g~E~~l~~glad~~~~~Gip~~   96 (426)
T PRK13789         60 VQSFLKSNPFDLIVVGPEDPLVAGFADWAAELGIPCF   96 (426)
T ss_pred             HHHHHHHcCCCEEEECCchHHHHHHHHHHHHcCCCcC
Confidence            7888899999999986433222222223345666643

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=82.84  E-value=2.2  Score=40.99  Aligned_cols=58  Identities=22%  Similarity=0.285  Sum_probs=38.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      |||||+         ||.+..-..+.+.|.+.|++|..+...                          ...+.-...+.+
T Consensus         1 MriLI~---------GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------~~dl~d~~~~~~   45 (286)
T PF04321_consen    1 MRILIT---------GASGFLGSALARALKERGYEVIATSRS--------------------------DLDLTDPEAVAK   45 (286)
T ss_dssp             EEEEEE---------TTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------CS-TTSHHHHHH
T ss_pred             CEEEEE---------CCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------hcCCCCHHHHHH
Confidence            899888         445566778899999999887776332                          011222357788


Q ss_pred             HHHhcCCCEEEEC
Q 009759          199 EVARFKPDIIHAS  211 (526)
Q Consensus       199 ~l~~~~pDiV~~~  211 (526)
                      ++.+.+||+|+-.
T Consensus        46 ~~~~~~pd~Vin~   58 (286)
T PF04321_consen   46 LLEAFKPDVVINC   58 (286)
T ss_dssp             HHHHH--SEEEE-
T ss_pred             HHHHhCCCeEecc
Confidence            8888899987654

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=82.67  E-value=1.9  Score=36.01  Aligned_cols=28  Identities=29%  Similarity=0.392  Sum_probs=22.8

Q ss_pred             CchHHHHHHHHHHHHHCCCeEEEEEeCC
Q 009759          134 SGYKNRFQNFIKYLREMGDEVMVVTTHE  161 (526)
Q Consensus       134 gG~~~~~~~l~~~L~~~G~~V~vi~~~~  161 (526)
                      +|.-.-+..++++|+++||+|.+.+...
T Consensus         9 ~Ghv~P~lala~~L~~rGh~V~~~~~~~   36 (139)
T PF03033_consen    9 RGHVYPFLALARALRRRGHEVRLATPPD   36 (139)
T ss_dssp             HHHHHHHHHHHHHHHHTT-EEEEEETGG
T ss_pred             hhHHHHHHHHHHHHhccCCeEEEeeccc
Confidence            5666778999999999999999887643

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....

>PRK06395 phosphoribosylamine--glycine ligase; Provisional

Probab=82.19  E-value=10  Score=38.83  Aligned_cols=92  Identities=13%  Similarity=0.083  Sum_probs=50.6

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHH
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (526)
                      .||||++..          +.+...++..|++.|++|.++..+. .+...   .+...  +       ......-...+.
T Consensus         2 ~~kVLvlG~----------G~re~al~~~l~~~g~~v~~~~~~~-Npg~~---~~a~~--~-------~~~~~~d~e~l~   58 (435)
T PRK06395          2 TMKVMLVGS----------GGREDAIARAIKRSGAILFSVIGHE-NPSIK---KLSKK--Y-------LFYDEKDYDLIE   58 (435)
T ss_pred             ceEEEEECC----------cHHHHHHHHHHHhCCCeEEEEECCC-Chhhh---hcccc--e-------eecCCCCHHHHH
Confidence            489999743          2456778888999998887774421 11100   00000  0       001112336888


Q ss_pred             HHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEE
Q 009759          198 SEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV  232 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v  232 (526)
                      ++++++++|+|++...........-.....|+|++
T Consensus        59 ~~~~~~~id~Vi~~~d~~l~~~~~~~l~~~Gi~v~   93 (435)
T PRK06395         59 DFALKNNVDIVFVGPDPVLATPLVNNLLKRGIKVA   93 (435)
T ss_pred             HHHHHhCCCEEEECCChHHHHHHHHHHHHCCCcEE
Confidence            89999999999987533222211111234477755

>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems

Probab=82.19  E-value=13  Score=32.21  Aligned_cols=114  Identities=21%  Similarity=0.149  Sum_probs=65.5

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCC-Cccc-------cCc-eeccccccCCCccccccch
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGV-PQEF-------YGA-KLIGSRSFPCPWYQKVPLS  189 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~-~~~~-------~~~-~~~~~~~~~~~~~~~~~~~  189 (526)
                      +|+++.++.. ....-....+...++.|.+. |.+|+++..+... ....       .+. +++.+.   .+.... ...
T Consensus         1 ~ilv~~e~~~-~~l~~~~~e~l~~A~~La~~~g~~v~av~~G~~~~~~~~l~~~l~~~G~d~v~~~~---~~~~~~-~~~   75 (164)
T PF01012_consen    1 NILVFAEHRD-GRLNPVSLEALEAARRLAEALGGEVTAVVLGPAEEAAEALRKALAKYGADKVYHID---DPALAE-YDP   75 (164)
T ss_dssp             EEEEEE-EET-CEE-HHHHHHHHHHHHHHHCTTSEEEEEEEETCCCHHHHHHHHHHSTTESEEEEEE----GGGTT-C-H
T ss_pred             CEEEEEECCC-CccCHHHHHHHHHHHHHHhhcCCeEEEEEEecchhhHHHHhhhhhhcCCcEEEEec---Cccccc-cCH
Confidence            5777877532 33344566678888899876 7899988877411 1111       121 121111   111110 112


Q ss_pred             hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecC
Q 009759          190 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTH  238 (526)
Q Consensus       190 ~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~  238 (526)
                      ..+...+.+.+++.+||+|++.......-.+..++.+++.+++..+.+.
T Consensus        76 ~~~a~~l~~~~~~~~~~lVl~~~t~~g~~la~~lA~~L~~~~v~~v~~l  124 (164)
T PF01012_consen   76 EAYADALAELIKEEGPDLVLFGSTSFGRDLAPRLAARLGAPLVTDVTDL  124 (164)
T ss_dssp             HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHHHT-EEEEEEEEE
T ss_pred             HHHHHHHHHHHHhcCCCEEEEcCcCCCCcHHHHHHHHhCCCccceEEEE
Confidence            2355678888899999999997754444445567788899998877763

They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....

>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family

Probab=80.77  E-value=2.7  Score=37.71  Aligned_cols=38  Identities=24%  Similarity=0.275  Sum_probs=28.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEG  162 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~  162 (526)
                      ||||+.-+.      |=.+.-+..|.++|++.||+|.|+++..+
T Consensus         1 M~ILlTNDD------Gi~a~Gi~aL~~~L~~~g~~V~VvAP~~~   38 (196)
T PF01975_consen    1 MRILLTNDD------GIDAPGIRALAKALSALGHDVVVVAPDSE   38 (196)
T ss_dssp             SEEEEE-SS-------TTSHHHHHHHHHHTTTSSEEEEEEESSS
T ss_pred             CeEEEEcCC------CCCCHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence            899777552      22345688999999888999999998764

This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....

>PRK00207 sulfur transfer complex subunit TusD; Validated

Probab=80.19  E-value=3.6  Score=34.03  Aligned_cols=42  Identities=24%  Similarity=0.264  Sum_probs=32.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCe-EEEEEeCCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDE-VMVVTTHEG  162 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~-V~vi~~~~~  162 (526)
                      ||++|+....|+  .+-..+..+.+++++.+.||+ |.|+...++
T Consensus         1 m~~~iv~~~~Py--~~~~~~~al~~A~aa~~~gh~v~~vFf~~Dg   43 (128)
T PRK00207          1 MRYAIAVTGPAY--GTQQASSAYQFAQALLAEGHELVSVFFYQDG   43 (128)
T ss_pred             CEEEEEEcCCCC--CCHHHHHHHHHHHHHHhCCCCeeEEEEehHH
Confidence            899999887554  344557789999999999998 477766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	526
2jjm_A	394	Crystal Structure Of A Family Gt4 Glycosyltransfera		6e-16
3mbo_A	414	Crystal Structure Of The Glycosyltransferase Babsha		2e-15
3c4q_A	426	Structure Of The Retaining Glycosyltransferase Msha		2e-12
3c48_A	438	Structure Of The Retaining Glycosyltransferase Msha		2e-12
2gej_A	406	Crystal Structure Of Phosphatidylinositol Mannosylt		2e-10
3okc_A	394	Crystal Structure Of Corynebacterium Glutamicum Pim		2e-09
3oka_A	381	Crystal Structure Of Corynebacterium Glutamicum Pim		2e-09
2x6q_A	416	Crystal Structure Of Trehalose Synthase Tret From P		1e-07
2xmp_A	416	Crystal Structure Of Trehalose Synthase Tret Mutant		5e-07
2r60_A	499	Structure Of Apo Sucrose Phosphate Synthase (Sps) O		5e-07
2xa1_A	416	Crystal Structure Of Trehalose Synthase Tret From P		2e-06
3vue_A	536	Crystal Structure Of Rice Granule Bound Starch Synt		4e-06
2iw1_A	374	Crystal Structure Of Waag, A Glycosyltransferase In		6e-05
3l01_A	428	Crystal Structure Of Monomeric Glycogen Synthase Fr		8e-05
3fro_A	439	Crystal Structure Of Pyrococcus Abyssi Glycogen Syn		9e-05
2bis_A	440	Structure Of Glycogen Synthase From Pyrococcus Abys		1e-04
2f9f_A	177	Crystal Structure Of The Putative Mannosyl Transfer		2e-04
2bfw_A	200	Structure Of The C Domain Of Glycogen Synthase From		3e-04

>pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 159/351 (45%), Gaps = 43/351 (12%)
Query: 145 KYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKV-----------PLSLALS 193
           K L E G E+  +T+  G+P          ++ +P  ++ +V           P  LAL+
Sbjct: 38  KQLAERGHEIHFITS--GLPFRL-------NKVYPNIYFHEVTVNQYSVFQYPPYDLALA 88
Query: 194 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC--VPIVMSYH-THVPVYIPRYTFSW 250
            ++     R   DI+H          A +  +++   + IV + H T + V     + + 
Sbjct: 89  SKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNN 148
Query: 251 LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANK-IRIWKKGVDSESFHPRFRS 309
           L       I+F    +D+  V +V+     E   +   NK I+     +D   +  R   
Sbjct: 149 L-------IRFGIEQSDV--VTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKR-DM 198
Query: 310 SEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELE 366
           ++++      E +K LI H+     V++  D ++     + E  A++  +GDGP    + 
Sbjct: 199 TQLKKEYGISESEKILI-HISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTIL 257
Query: 367 KMFTGMPAVFTGMLLGEE--LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG 424
           ++   +      + LG++  +++  A  D+ ++ SE E+ GLV+LEAM+ G+P +G R G
Sbjct: 258 QLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVG 317
Query: 425 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM 475
           GIP++I   Q G  GYL   GD      +   LL ++EL   MG+ AR+ +
Sbjct: 318 GIPEVI---QHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESV 365

>pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 159/351 (45%), Gaps = 43/351 (12%)
Query: 145 KYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKV-----------PLSLALS 193
           K L E G E+  +T+  G+P          ++ +P  ++ +V           P  LAL+
Sbjct: 58  KQLAERGHEIHFITS--GLPFRL-------NKVYPNIYFHEVTVNQYSVFQYPPYDLALA 108
Query: 194 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC--VPIVMSYH-THVPVYIPRYTFSW 250
            ++     R   DI+H          A +  +++   + IV + H T + V     + + 
Sbjct: 109 SKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNN 168
Query: 251 LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANK-IRIWKKGVDSESFHPRFRS 309
           L       I+F    +D+  V +V+     E   +   NK I+     +D   +  R   
Sbjct: 169 L-------IRFGIEQSDV--VTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKR-DM 218
Query: 310 SEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELE 366
           ++++      E +K LI H+     V++  D ++     + E  A++  +GDGP    + 
Sbjct: 219 TQLKKEYGISESEKILI-HISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTIL 277
Query: 367 KMFTGMPAVFTGMLLGEE--LSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG 424
           ++   +      + LG++  +++  A  D+ ++ SE E+ GLV+LEAM+ G+P +G R G
Sbjct: 278 QLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVG 337
Query: 425 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM 475
           GIP++I   Q G  GYL   GD      +   LL ++EL   MG+ AR+ +
Sbjct: 338 GIPEVI---QHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESV 385

>pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 289 NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP-DKPLIVHVGRL----GVEKSLDFLKR 343
           ++I +   G D E + P    +  R R   G P    ++  VGRL    G +  +  +  
Sbjct: 188 DRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAA 247
Query: 344 VMDRLPEARI-AFIGDGP---------YREELEKMFTGMPAVFTGMLLGEELSQAYASGD 393
           + DR P+  +   I  GP         YR   E++       F       EL   Y + D
Sbjct: 248 LFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAAD 307
Query: 394 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 453
           +  +PS +E+ GLV +EA +SG PV+  R GG+P  + E + G +    +P    D L+ 
Sbjct: 308 IVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALAT 367
Query: 454 LEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 496
              LL + E R  MG+ A +    + W AAT    +  YN AI
Sbjct: 368 ---LLDDDETRIRMGEDAVEHARTFSW-AATAAQLSSLYNDAI 406

>pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 289 NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP-DKPLIVHVGRL----GVEKSLDFLKR 343
           ++I +   G D E + P    +  R R   G P    ++  VGRL    G +  +  +  
Sbjct: 208 DRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAA 267
Query: 344 VMDRLPEARI-AFIGDGP---------YREELEKMFTGMPAVFTGMLLGEELSQAYASGD 393
           + DR P+  +   I  GP         YR   E++       F       EL   Y + D
Sbjct: 268 LFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAAD 327
Query: 394 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 453
           +  +PS +E+ GLV +EA +SG PV+  R GG+P  + E + G +    +P    D L+ 
Sbjct: 328 IVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALAT 387
Query: 454 LEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 496
              LL + E R  MG+ A +    + W AAT    +  YN AI
Sbjct: 388 ---LLDDDETRIRMGEDAVEHARTFSW-AATAAQLSSLYNDAI 426

>pdb|2GEJ|A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man Length = 406

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 152/381 (39%), Gaps = 46/381 (12%)
Query: 124 FVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVV---TTHEGVPQEFYGAKLIGSRSFPC 180
            V P  F    G ++      + LR+ G EV V+   + H  +P       + G ++ P 
Sbjct: 25  MVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV----VSGGKAVPI 80
Query: 181 PWYQKVP---LSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHT 237
           P+   V       A   ++   +A    D++H   P       L + +    PIV ++HT
Sbjct: 81  PYNGSVARLRFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLAL-QAAEGPIVATFHT 139
Query: 238 HVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKG 297
                +    F  +++P     K + R A    V  +A    +EA     ++ + I   G
Sbjct: 140 STTKSLTLSVFQGILRPYHE--KIIGRIA----VSDLARRWQMEA---LGSDAVEI-PNG 189
Query: 298 VDSESF--------HPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP 349
           VD  SF        +PR    E R  L  G  D+P      R G+   L  L +++ R P
Sbjct: 190 VDVASFADAPLLDGYPR----EGRTVLFLGRYDEP------RKGMAVLLAALPKLVARFP 239
Query: 350 EARIAFIGDGPYREELEKMFTGMPAV--FTGMLLGEELSQAYASGDVFVMPS-ESETLGL 406
           +  I  +G G   +EL +    +     F G +     + A  S DV+  P    E+ G+
Sbjct: 240 DVEILIVGRGD-EDELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGI 298
Query: 407 VVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET 466
           V++EAM++G  VV         ++    DG  G L    D D   + L  +L + +LR  
Sbjct: 299 VLVEAMAAGTAVVASDLDAFRRVL---ADGDAGRLVPVDDADGMAAALIGILEDDQLRAG 355
Query: 467 MGQAARQEMEKYDWRAATRTI 487
               A + + +YDW   +  I
Sbjct: 356 YVARASERVHRYDWSVVSAQI 376

>pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 297 GVDSESFHPRFRSSEMRWRLSNGEPDK-PLIVHVGRLGVEKSLDFLKRVMDRL----PEA 351
           GVD + F P     +   R   G  D  P+I    RL   K  D L + M ++    P+A
Sbjct: 171 GVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDA 230
Query: 352 RIAFIGDGPYREELEKMFTGMP--AVFTGMLLGEELSQAYASGDVFVMPSES-------E 402
           ++  +G G Y   L ++ T +     F G L  +++    A+ D+F MP+ +       E
Sbjct: 231 QLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE 290
Query: 403 TLGLVVLEAMSSGIPVVGVRAGGIPDII 430
            LG+V LEA + G+PV+   +GG P+ +
Sbjct: 291 GLGIVYLEAQACGVPVIAGTSGGAPETV 318

>pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 297 GVDSESFHPRFRSSEMRWRLSNGEPDK-PLIVHVGRLGVEKSLDFLKRVMDRL----PEA 351
           GVD + F P     +   R   G  D  P+I    RL   K  D L + M ++    P+A
Sbjct: 171 GVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDA 230
Query: 352 RIAFIGDGPYREELEKMFTGMP--AVFTGMLLGEELSQAYASGDVFVMPSES-------E 402
           ++  +G G Y   L ++ T +     F G L  +++    A+ D+F MP+ +       E
Sbjct: 231 QLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE 290
Query: 403 TLGLVVLEAMSSGIPVVGVRAGGIPDII 430
            LG+V LEA + G+PV+   +GG P+ +
Sbjct: 291 GLGIVYLEAQACGVPVIAGTSGGAPETV 318

>pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 320 EPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP-----YREELE 366
           +P+KP+I  V R     G+   ++  ++V +++P  ++  +G    D P     + + L 
Sbjct: 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLR 287
Query: 367 KMFTGMPAVFTGMLLG---EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 423
           K+           L+G    E++    + DV +  S  E  GL V EAM  G PV+G   
Sbjct: 288 KIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV 347
Query: 424 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 477
           GGI   I    DG+ G+L    D ++ +  +  LL + E+ + MG  A++ + K
Sbjct: 348 GGIKFQIV---DGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRK 396

>pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a From P.Horishiki In Complex With Udp Length = 416

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 320 EPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP-----YREELE 366
           +P+KP+I  V R     G+   ++  ++V +++P  ++  +G    D P     + + L 
Sbjct: 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLR 287
Query: 367 KMFTGMPAVFTGMLLG---EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 423
           K+           L+G    E++    + DV +  S     GL V EAM  G PV+G   
Sbjct: 288 KIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIRAGFGLTVTEAMWKGKPVIGRAV 347
Query: 424 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 477
           GGI   I    DG+ G+L    D ++ +  +  LL + E+ + MG  A++ + K
Sbjct: 348 GGIKFQIV---DGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRK 396

>pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 383 EELSQAYA----SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI 438
           +EL+  YA     G VF + S  E  GL  +EAM+SG+P V  R GG  +I+     GK 
Sbjct: 346 QELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEIL---DGGKY 402
Query: 439 GYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATR 485
           G L +P D +D    L     ++E      +  +Q + E+Y W+   R
Sbjct: 403 GVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETAR 450

>pdb|2XA1|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) Length = 416

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 320 EPDKPLIVHVGRL----GVEKSLDFLKRVMDRLPEARIAFIG----DGP-----YREELE 366
           +P+KP+I  V R     G+   ++  ++V +++P  ++  +G    D P     + + L 
Sbjct: 228 DPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVXAHDDPEGWIYFEKTLR 287
Query: 367 KMFTGMPAVFTGMLLG---EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 423
           K+           L+G    E++    + DV +  S  E  GL V EA   G PV+G   
Sbjct: 288 KIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQXSIREGFGLTVTEAXWKGKPVIGRAV 347
Query: 424 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK 477
           GGI   I    DG+ G+L    D ++ +  +  LL + E+ +  G  A++ + K
Sbjct: 348 GGIKFQIV---DGETGFLVR--DANEAVEVVLYLLKHPEVSKEXGAKAKERVRK 396

>pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 324 PLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGML--- 380
           PLI  +GRL  +K  D +   +  L +  +  +  G  +++ EK+   M   + G +   
Sbjct: 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAV 387
Query: 381 --LGEELSQAYASG-DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGK 437
                 L+    +G DV  +PS  E  GL+ L+ M  G P      GG+ D + E + G 
Sbjct: 388 VKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTG- 446
Query: 438 IGYLFNPGDLD-DC 450
               F+ G L  DC
Sbjct: 447 ----FHMGRLSVDC 456

>pdb|2IW1|A Chain A, Crystal Structure Of Waag, A Glycosyltransferase Involved In Lipopolysaccharide Biosynthesis Length = 374

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 314 WRLSNG-EPDKPLIVHVG----RLGVEKSLDFLKRVMDRLPEARIAFI--GDGPYREELE 366
           +R  NG +  + L++ VG    R GV++S++ L  + + L    + F+   D P + E  
Sbjct: 186 YRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEAL 245
Query: 367 KMFTGMPA---VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 423
               G+ +    F+G     ++S+  A+ D+ + P+  E  G+V+LEA+++G+PV+    
Sbjct: 246 AEKLGVRSNVHFFSGR---NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAV 302
Query: 424 GGIPDIIPEDQDGK-IGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD 479
            G    I +   G  I   F+   L++ L K    L    LR    + AR   +  D
Sbjct: 303 CGYAHYIADANCGTVIAEPFSQEQLNEVLRK---ALTQSPLRMAWAENARHYADTQD 356

>pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 107/286 (37%), Gaps = 54/286 (18%)
Query: 205 PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHR 264
           PD++H      +  GALI  K   +P V + H      +P + F              H 
Sbjct: 123 PDVVHFHDWHTVFAGALI-KKYFKIPAVFTIHRLNKSKLPAFYF--------------HE 167
Query: 265 AADLTLVPSVAIGKDLEAARVTA--------------------ANKIRIWKKGVD----S 300
           A    L P   I  +     +                        KI     G+D    +
Sbjct: 168 AGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWN 227
Query: 301 ESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLG-VEKSLDFLKRVMDRLP------EAR 352
           ES+    R    +  LS  G  +    + +GR    +K +D L + ++ L       E R
Sbjct: 228 ESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR 287
Query: 353 IAFIGDGP-----YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV 407
              IG G      +   LE+   G   V T ML  E + + Y S D  ++PS  E  GLV
Sbjct: 288 FIIIGKGDPELEGWARSLEEK-HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLV 346
Query: 408 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 453
            LEAM  G   +    GG+ DII  ++ G +    +PG+L + + K
Sbjct: 347 ALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAILK 391

>pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 107/286 (37%), Gaps = 54/286 (18%)
Query: 205 PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHR 264
           PD++H      +  GALI  K   +P V + H      +P + F              H 
Sbjct: 123 PDVVHFHDWHTVFAGALI-KKYFKIPAVFTIHRLNKSKLPAFYF--------------HE 167
Query: 265 AADLTLVPSVAIGKDLEAARVTA--------------------ANKIRIWKKGVD----S 300
           A    L P   I  +     +                        KI     G+D    +
Sbjct: 168 AGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWN 227
Query: 301 ESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLG-VEKSLDFLKRVMDRLP------EAR 352
           ES+    R    +  LS  G  +    + +GR    +K +D L + ++ L       E R
Sbjct: 228 ESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR 287
Query: 353 IAFIGDGP-----YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV 407
              IG G      +   LE+   G   V T ML  E + + Y S D  ++PS  E  GLV
Sbjct: 288 FIIIGKGDPELEGWARSLEEK-HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLV 346
Query: 408 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 453
            LEAM  G   +    GG+ DII  ++ G +    +PG+L + + K
Sbjct: 347 ALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAILK 391

>pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 107/286 (37%), Gaps = 54/286 (18%)
Query: 205 PDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHR 264
           PD++H      +  GALI  K   +P V + H      +P + F              H 
Sbjct: 124 PDVVHFHDWHTVFAGALI-KKYFKIPAVFTIHRLNKSKLPAFYF--------------HE 168
Query: 265 AADLTLVPSVAIGKDLEAARVTA--------------------ANKIRIWKKGVD----S 300
           A    L P   I  +     +                        KI     G+D    +
Sbjct: 169 AGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWN 228
Query: 301 ESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLG-VEKSLDFLKRVMDRLP------EAR 352
           ES+    R    +  LS  G  +    + +GR    +K +D L + ++ L       E R
Sbjct: 229 ESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR 288
Query: 353 IAFIGDGP-----YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLV 407
              IG G      +   LE+   G   V T ML  E + + Y S D  ++PS  E  GLV
Sbjct: 289 FIIIGKGDPELEGWARSLEEK-HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLV 347
Query: 408 VLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSK 453
            LEAM  G   +    GG+ DII  ++ G +    +PG+L + + K
Sbjct: 348 ALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAILK 392

>pdb|2F9F|A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a Length = 177

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 327 VHVGRLGVEKSLDFLKRVMDRLPEARIAFIG---DGPYREELEKMFTGMP---AVFTGML 380
           + V R+  EK ++    V  +L + ++  +G    G + E   +    +      F G +
Sbjct: 27  LSVNRIYPEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIXKIAPDNVKFLGSV 86
Query: 381 LGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY 440
             EEL   Y+     +  ++ E  GL  +EA +SG PV+ V  GG  + +  +   K GY
Sbjct: 87  SEEELIDLYSRCKGLLCTAKDEDFGLTPIEAXASGKPVIAVNEGGFKETVINE---KTGY 143
Query: 441 LFN 443
           L N
Sbjct: 144 LVN 146

>pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 335 EKSLDFLKRVMDRLP------EARIAFIGDGP-----YREELEKMFTGMPAVFTGMLLGE 383
           +K +D L + ++ L       E R   IG G      +   LE+   G   V T ML  E
Sbjct: 49  QKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKH-GNVKVITEMLSRE 107
Query: 384 ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN 443
            + + Y S D  ++PS  E  GLV LEAM  G   +    GG+ DII  ++ G +    +
Sbjct: 108 FVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGD 166
Query: 444 PGDLDDCLSK 453
           PG+L + + K
Sbjct: 167 PGELANAILK 176

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	526
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	1e-74
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	8e-73
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	1e-67
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	1e-53
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	2e-53
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	2e-50
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	8e-43
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	2e-39
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	2e-38
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	5e-36
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	3e-31
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	6e-31
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	6e-24
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	3e-19
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	4e-15
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	3e-14
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	3e-13
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	3e-10
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406

 Score =  241 bits (616), Expect = 1e-74
 Identities = 79/395 (20%), Positives = 136/395 (34%), Gaps = 44/395 (11%)

Query: 117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSR 176
              RI +      F    G ++      + LR+ G EV V+        +     + G +
Sbjct: 19  SHMRIGMVCP-YSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASP-HVKLPDYVVSGGK 76

Query: 177 SFPCPWYQKV---PLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLC-VPIV 232
           + P P+   V       A   ++   +A    D++H   P        ++A      PIV
Sbjct: 77  AVPIPYNGSVARLRFGPATHRKVKKWIAEGDFDVLHIHEP--NAPSLSMLALQAAEGPIV 134

Query: 233 MSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAAN--- 289
            ++HT     +    F  +++P        H      +  S       + AR        
Sbjct: 135 ATFHTSTTKSLTLSVFQGILRP-------YHEKIIGRIAVS-------DLARRWQMEALG 180

Query: 290 -KIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGV-EKSLDFL----KR 343
                   GVD  SF                  +   ++ +GR     K +  L     +
Sbjct: 181 SDAVEIPNGVDVASFADAPLLDGYP-------REGRTVLFLGRYDEPRKGMAVLLAALPK 233

Query: 344 VMDRLPEARIAFIGDGPYREELEKMFTGMPAV-FTGMLLGEELSQAYASGDVFVMPS-ES 401
           ++ R P+  I  +G G   E  E+       + F G +     + A  S DV+  P    
Sbjct: 234 LVARFPDVEILIVGRGDEDELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGG 293

Query: 402 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 461
           E+ G+V++EAM++G  VV         ++    DG  G L    D D   + L  +L + 
Sbjct: 294 ESFGIVLVEAMAAGTAVVASDLDAFRRVL---ADGDAGRLVPVDDADGMAAALIGILEDD 350

Query: 462 ELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 496
           +LR      A + + +YDW   +  I    Y    
Sbjct: 351 QLRAGYVARASERVHRYDWSVVSAQIM-RVYETVS 384

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394

 Score =  235 bits (602), Expect = 8e-73
 Identities = 76/389 (19%), Positives = 140/389 (35%), Gaps = 32/389 (8%)

Query: 116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGS 175
           S  R+  +     P   + G ++  ++FI         V   T +      +   K +  
Sbjct: 2   SASRKTLVVTNDFP-PRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAY--DKTLDY 58

Query: 176 RSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSY 235
                P    +P +   +  +   +   + D +   +   +   A    +     ++ S 
Sbjct: 59  EVIRWPRSVMLP-TPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIAST 117

Query: 236 HTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWK 295
           H H            ++      ++ +    D+    S    +  ++A  +         
Sbjct: 118 HGHEV-------GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHP-TFEHLP 169

Query: 296 KGVDSESFHPRFRSSEMRWRLSNG-EPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPE 350
            GVD + F P     +   R   G     P+I    RL   K  D L     +V+   P+
Sbjct: 170 SGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPD 229

Query: 351 ARIAFIGDGPYREELEKMFTGMPA--VFTGMLLGEELSQAYASGDVFVMPS-------ES 401
           A++  +G G Y   L ++ T +     F G L  +++    A+ D+F MP+       + 
Sbjct: 230 AQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDV 289

Query: 402 ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ 461
           E LG+V LEA + G+PV+   +GG P+ +        G +    D+D     L  LL + 
Sbjct: 290 EGLGIVYLEAQACGVPVIAGTSGGAPETV---TPAT-GLVVEGSDVDKLSELLIELLDDP 345

Query: 462 ELRETMGQAARQEME-KYDWRA-ATRTIR 488
             R  MG A R  +E ++ W     R   
Sbjct: 346 IRRAAMGAAGRAHVEAEWSWEIMGERLTN 374

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394

 Score =  222 bits (568), Expect = 1e-67
 Identities = 77/376 (20%), Positives = 150/376 (39%), Gaps = 31/376 (8%)

Query: 142 NFIKYLREMGDEVMVVTTHEGVPQEFY--GAKLIGSRSFPCPWYQKVPLSLALSPRIISE 199
              K L E G E+  +T+                         +Q  P  LAL+ ++   
Sbjct: 35  ELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEV 94

Query: 200 VARFKPDIIHASSPGIMVFGALIIAKLLC--VPIVMSYH-THVPVYIPRYTFSWLVKPMW 256
             R   DI+H          A +  +++   + IV + H T + V     + + L     
Sbjct: 95  AQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNL----- 149

Query: 257 LVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRL 316
             I+F    +D+    S ++  +           I+     +D   +  R  +   +   
Sbjct: 150 --IRFGIEQSDVVTAVSHSLINETHELVKPN-KDIQTVYNFIDERVYFKRDMTQLKKEY- 205

Query: 317 SNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGM- 372
                 + +++H+      K +  + +   ++    +A++  +GDGP    + ++   + 
Sbjct: 206 -GISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLH 264

Query: 373 --PAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDI 429
               V F G    + +++  A  D+ ++ SE E+ GLV+LEAM+ G+P +G R GGIP++
Sbjct: 265 IEDRVLFLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEV 322

Query: 430 IPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE-MEKYDW-RAATRTI 487
           I   Q G  GYL   GD      +   LL ++EL   MG+ AR+   E++   +  ++  
Sbjct: 323 I---QHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYE 379

Query: 488 RNEQYNAAIWFWRKKR 503
               Y   +   +  +
Sbjct: 380 --TIYYDVLRDDKNGK 393

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374

 Score =  184 bits (469), Expect = 1e-53
 Identities = 55/361 (15%), Positives = 116/361 (32%), Gaps = 36/361 (9%)

Query: 145 KYLREMGDEVMVVT--THEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVAR 202
             +   G  V V T       P+ F   ++      P   +     +      + + +  
Sbjct: 25  STVAARGHHVRVYTQSWEGDCPKAFELIQV------PVKSHTNHGRNAEYYAWVQNHLKE 78

Query: 203 FKPDIIHASSPGIMVFGALIIAKLLC-VPIVMSYHTHVPVYIPRY-TFSWLVKPMWLVIK 260
              D +   +   M    +  A  +C    V      +     RY  ++   +       
Sbjct: 79  HPADRVVGFNK--MPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERAT----- 131

Query: 261 FLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRS---SEMRWRLS 317
           F    +   ++ +     D +    T   + +I   G+  +  +           R +  
Sbjct: 132 FEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKN- 190

Query: 318 NGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGPYREELEKMFT--G 371
             +  + L++ VG     K +D        + + L    + F+       + E +    G
Sbjct: 191 GIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLG 250

Query: 372 MPA--VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDI 429
           + +   F       ++S+  A+ D+ + P+  E  G+V+LEA+++G+PV+     G    
Sbjct: 251 VRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHY 308

Query: 430 IPEDQDGKIGYLF-NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRA-ATRTI 487
           I    D   G +   P   +     L   L    LR    + AR   +  D  +   +  
Sbjct: 309 I---ADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAA 365

Query: 488 R 488
            
Sbjct: 366 D 366

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438

 Score =  185 bits (473), Expect = 2e-53
 Identities = 89/416 (21%), Positives = 150/416 (36%), Gaps = 42/416 (10%)

Query: 116 SRPRRIALF-VEPSPFSYVSGYK----NRF-QNFIKYLREMGDEVMVVT--THEGVPQEF 167
               R+A+  +  SP            N +  +    L + G EV + T  T     +  
Sbjct: 18  GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV 77

Query: 168 YGAKLIGSRSFPC------PWYQKVPLSLALSPRIISEVAR--FKPDIIHA-SSPGIMVF 218
             A+ +   +            +      A +  ++S   R     D+IH+       V 
Sbjct: 78  RVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQV- 136

Query: 219 GALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVI--KFLHRAADLTLVPSVAI 276
              ++  L  +P++ + HT   V       S   +     I  + L   AD+  V +   
Sbjct: 137 -GWLLRDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEE 195

Query: 277 GKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG-EPDKPLIVHVGRL--- 332
            +DL        ++I +   G D E + P    +  R R   G      ++  VGRL   
Sbjct: 196 MQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPF 255

Query: 333 -GVEKSLDFLKRVMDRLPEARIAFI------GDGPYREELEKMFTGMPA----VFTGMLL 381
            G +  +  +  + DR P+  +  I      G     +    M   +       F     
Sbjct: 256 KGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRP 315

Query: 382 GEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYL 441
             EL   Y + D+  +PS +E+ GLV +EA +SG PV+  R GG+P  +    +G+ G L
Sbjct: 316 PSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAV---AEGETGLL 372

Query: 442 FNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW-RAATRTIRNEQYNAAI 496
            +          L  LL + E R  MG+ A +    + W   A +      YN AI
Sbjct: 373 VDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLS--SLYNDAI 426

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416

 Score =  177 bits (451), Expect = 2e-50
 Identities = 71/370 (19%), Positives = 131/370 (35%), Gaps = 48/370 (12%)

Query: 144 IKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARF 203
           +  LR +G E       EG  + F   K   +        +       L   +  E ++F
Sbjct: 63  VPLLRSIGIEARWFVI-EGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNRENSKF 121

Query: 204 ----KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVI 259
                 D +    P           K    P +  +  H+ +  P   F   ++      
Sbjct: 122 IDLSSFDYVLVHDPQPAALIEFYEKK---SPWL--WRCHIDLSSPNREFWEFLR------ 170

Query: 260 KFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG 319
           +F+ +           +  +L+       NK  I    +D  S            R+   
Sbjct: 171 RFVEKYDRYIFHLPEYVQPELDR------NKAVIMPPSIDPLSEKNVELKQTEILRILER 224

Query: 320 ---EPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIGDGP---------YRE 363
              +P+KP+I  V R    K +  +    ++V +++P  ++  +G            + +
Sbjct: 225 FDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEK 284

Query: 364 ELEKMFTGMPAVFTGMLLG---EELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG 420
            L K+           L+G    E++    + DV +  S  E  GL V EAM  G PV+G
Sbjct: 285 TLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIG 344

Query: 421 VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE-MEKYD 479
              GGI   I    DG+ G+L    D ++ +  +  LL + E+ + MG  A++   + + 
Sbjct: 345 RAVGGIKFQI---VDGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFI 399

Query: 480 W-RAATRTIR 488
             +   R + 
Sbjct: 400 ITKHMERYLD 409

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166

 Score =  149 bits (378), Expect = 8e-43
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 9/167 (5%)

Query: 324 PLIVHVGRLGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGMP-AVFTGM 379
             I  VGR   EK+   L + +       +  +   G GP  ++++ +   +      G 
Sbjct: 3   FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGF 62

Query: 380 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA-GGIPDIIPEDQDGKI 438
           +   EL +   +  ++V  +  E+  +  LEA+S GI  V   +          D+    
Sbjct: 63  VNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE---- 118

Query: 439 GYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATR 485
             LF P +  D  +K++  L N+  RE M     +    Y    +  
Sbjct: 119 RSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVI 165

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413

 Score =  147 bits (372), Expect = 2e-39
 Identities = 41/392 (10%), Positives = 100/392 (25%), Gaps = 27/392 (6%)

Query: 106 LLDPEINENNSRPRRIALFVEPSPFSYVS-GYKNRFQNFIKYLREMGDEVMVVTTHEGVP 164
           +       ++ + +R+ L V      ++  G     +   +       +  ++ T     
Sbjct: 34  ITPFNARTSSIKGKRLNLLVPSINQEHMFGGISTALK-LFEQFDNKKFKKRIILTDATPN 92

Query: 165 QEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIA 224
            +   +        P          +  + R    +   K DI  A++         I++
Sbjct: 93  PKDLQSFKSFKYVMPEEDKDFALQIVPFNDRYNRTIPVAKHDIFIATAWWTAYAAQRIVS 152

Query: 225 KLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR 284
                  +        +      F        L             V +  + K     +
Sbjct: 153 WQSDTYGIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSELLKQYFNNK 212

Query: 285 VTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEK-------- 336
                    ++  +++   +                  + +I+  GR  V++        
Sbjct: 213 GYNFTDEYFFQPKINTTLKNYIND----------KRQKEKIILVYGRPSVKRNAFTLIVE 262

Query: 337 SLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV 396
           +L    +  DR  E +I  +G+      L K          G L  E+ +       + +
Sbjct: 263 ALKIFVQKYDRSNEWKIISVGEKHKDIALGKGI---HLNSLGKLTLEDYADLLKRSSIGI 319

Query: 397 MPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEP 456
               S       LE    G+ V+  +                       + ++    L  
Sbjct: 320 SLMISPHPSYPPLEMAHFGLRVITNKYENKDLSN----WHSNIVSLEQLNPENIAETLVE 375

Query: 457 LLYNQELRETMGQAARQEMEKYDWRAATRTIR 488
           L  +   R+   + +   M   +       I+
Sbjct: 376 LCMSFNNRDVDKKESSNMMFYINEFNEFSFIK 407

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177

 Score =  138 bits (349), Expect = 2e-38
 Identities = 37/184 (20%), Positives = 76/184 (41%), Gaps = 25/184 (13%)

Query: 297 GVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI 356
            V++  F  +                    + V R+  EK ++    V  +L + ++  +
Sbjct: 11  PVETSKFKFK--------------CYGDFWLSVNRIYPEKRIELQLEVFKKLQDEKLYIV 56

Query: 357 GDGPYREELEKMFTGMPA------VFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE 410
           G     +  E+    +         F G +  EEL   Y+     +  ++ E  GL  +E
Sbjct: 57  GWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIE 116

Query: 411 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE-LRETMGQ 469
           AM+SG PV+ V  GG  + +    + K GYL N  D+++ +  ++ +  N +  ++   +
Sbjct: 117 AMASGKPVIAVNEGGFKETV---INEKTGYLVNA-DVNEIIDAMKKVSKNPDKFKKDCFR 172

Query: 470 AARQ 473
            A++
Sbjct: 173 RAKE 176

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499

 Score =  139 bits (352), Expect = 5e-36
 Identities = 71/420 (16%), Positives = 136/420 (32%), Gaps = 89/420 (21%)

Query: 147 LREMGDEVMVVT--------THEGVPQEFY----GAKLIGSRSFPCPWYQK---VPLSLA 191
           L EMG +V ++T               ++Y      +++        +  K    P    
Sbjct: 46  LAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDKFLPKEELWPYLHE 105

Query: 192 LSPRIISEVARF--KPDIIHA-SSPGIMVFGALIIAKLLCVPIVMSYHT----------- 237
              +II+        P ++      G +    +++  +  +P   + H+           
Sbjct: 106 YVNKIINFYREEGKFPQVVTTHYGDGGLA--GVLLKNIKGLPFTFTGHSLGAQKMEKLNV 163

Query: 238 ---HVPVYIPRYTFS-WLVKPMWLVIKFLHRAADLTLVPS-------VAIGKDLEAARVT 286
              +      R+ F   ++     +       AD  +V +        +      A  V 
Sbjct: 164 NTSNFKEMDERFKFHRRIIAERLTM-----SYADKIIVSTSQERFGQYSHDLYRGAVNVE 218

Query: 287 AANKIRIWKKGVDSESFHPRFR-------SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLD 339
             +K  +   GV++  F   +        +  +   L +   + P I+   RL  +K+  
Sbjct: 219 DDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHY 278

Query: 340 FLKRVMDRLPEAR-------IAFIGDGPYREELEKMFTGMPAV----------------- 375
            L     +  E +            + P  E+  +       +                 
Sbjct: 279 GLVEAYVQNKELQDKANLVLTLRGIENP-FEDYSRAGQEEKEILGKIIELIDNNDCRGKV 337

Query: 376 -FTGMLLGEELSQAY----ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII 430
               +   +EL+  Y    + G VF + S  E  GL  +EAM+SG+P V  R GG  +I+
Sbjct: 338 SMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEIL 397

Query: 431 PEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE-MEKYDW-RAATRTIR 488
                GK G L +P D +D    L     ++E      +  +Q   E+Y W   A   + 
Sbjct: 398 ---DGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLE 454

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816

 Score =  127 bits (320), Expect = 3e-31
 Identities = 67/405 (16%), Positives = 115/405 (28%), Gaps = 88/405 (21%)

Query: 195 RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIP---------- 244
             +S+    KPD+I  +        A ++A  L V      H       P          
Sbjct: 398 VELSKELNGKPDLIIGNYS-DGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLD 456

Query: 245 -RYTFSWLVKPMWLVIKFLHRAADLT-----------------LVPSVAIGKDLEAARVT 286
            +Y FS         +         T                    ++     +      
Sbjct: 457 DKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDV 516

Query: 287 AANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG-------------------EPDKPLIV 327
              K  I   G D   + P         +  +                    +  KP++ 
Sbjct: 517 FDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILF 576

Query: 328 HVGRLGVEKSLDFLKRVMDRL----PEARIAFIG--------DGPYREELEKM------- 368
            + RL   K+L  L     +       A +  +G        D   + E++KM       
Sbjct: 577 TMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEY 636

Query: 369 -----FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA 423
                F  + +    +  GE       +   FV P+  E  GL V+EAM+ G+P      
Sbjct: 637 KLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK 696

Query: 424 GGIPDIIPEDQDGKIGYLFNPGDLDD----CLSKLEPLLYNQELRETMGQAARQE-MEKY 478
           GG  +II     GK G+  +P   D               +    + + +   Q   EKY
Sbjct: 697 GGPAEII---VHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKY 753

Query: 479 DWRA-ATRTIRNEQYNAAIWFWRK----KRAQLLRPIQWLAKRIF 518
            W+  + R +          FW+      R +  R ++      +
Sbjct: 754 TWQIYSQRLL--TLT-GVYGFWKHVSNLDRLEARRYLEMFYALKY 795

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413

 Score =  123 bits (309), Expect = 6e-31
 Identities = 68/418 (16%), Positives = 134/418 (32%), Gaps = 60/418 (14%)

Query: 123 LFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPW 182
           + V        SGY    +  +  + +   EV+V   H         A +    +     
Sbjct: 4   IIVGAHSSVP-SGYGRVMRAIVPRISK-AHEVIVFGIHA--FGRSVHANIEEFDAQTAEH 59

Query: 183 YQKVPLSLALSPRIISEVARFKPDII-HASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV 241
            + +         +   +   KPDI+   + P ++    L + K      ++ Y   V  
Sbjct: 60  VRGLNEQGFYYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSK 119

Query: 242 YIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSE 301
            I         + +W    F H      +  S     D+          I I    VD++
Sbjct: 120 NIR--------ENLW--WIFSHPKVVGVMAMSKCWISDICNYGCK--VPINIVSHFVDTK 167

Query: 302 SFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFL----KRVMDRLPEARIAFIG 357
           + +   +   +         D  L +++ R    K LD       R + + P+A++ F+ 
Sbjct: 168 TIYDARKLVGLSEY-----NDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLC 222

Query: 358 DGP---------------YREELEKMFTGMPAV--FTGMLLGEELSQAYASGDVFVMPSE 400
           +                     ++ +FT +  +     +L  E +   Y + DV V  S 
Sbjct: 223 NSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS 282

Query: 401 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED--------------QDGKIGYLFNPGD 446
            E  GL   E    G P++    GG  D    D                  IG +    D
Sbjct: 283 GEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIID 342

Query: 447 LDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWFWRKKR 503
           +DD +        +++ R+  G+  +  +  K  W   +  I  + +N+ +    ++ 
Sbjct: 343 VDDLVEAFT-FFKDEKNRKEYGKRVQDFVKTKPTWDDISSDI-IDFFNSLLRVESRET 398

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342

 Score =  102 bits (255), Expect = 6e-24
 Identities = 51/333 (15%), Positives = 88/333 (26%), Gaps = 70/333 (21%)

Query: 172 LIGSRSFPCPWYQKVPLSLALSPRIISEVAR-FKPDIIHASSPGIMVFGALIIAKLLCVP 230
           L+G+   P      + +  A  P  I    R    D++H  S                  
Sbjct: 52  LLGAPGSPAGR-PGLTVVPAGEPEEIERWLRTADVDVVHDHSG----GVIGPAGLPPGTA 106

Query: 231 IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANK 290
            + S+H       P                      D  ++P                  
Sbjct: 107 FISSHHFTTRPVNPVGCTY----SSRAQRAHCGGGDDAPVIP----------------I- 145

Query: 291 IRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE 350
                  VD   +             ++    +  ++ +GR+   K              
Sbjct: 146 ------PVDPARYRSA----------ADQVAKEDFLLFMGRVSPHKGALEAAAFA-HACG 188

Query: 351 ARIAFIGDGPYREELEKMFTGMPA--VFTGMLLGEELSQAYASGDVFVMPSES------- 401
            R+   G     E  +++     +     G + GE      AS    +  S++       
Sbjct: 189 RRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGG 248

Query: 402 ---ETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYL--FNPGDLDDCLSKLEP 456
              E    VV EA  SG PVVG   G + +I+       +GY   F P +    L+ L  
Sbjct: 249 IWCEPGATVVSEAAVSGTPVVGTGNGCLAEIV-PSVGEVVGYGTDFAPDEARRTLAGLPA 307

Query: 457 LLYNQELRETMGQAARQEMEKYDWRA-ATRTIR 488
                       +  R  +  +     A R + 
Sbjct: 308 S----------DEVRRAAVRLWGHVTIAERYVE 330

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200

 Score = 85.3 bits (212), Expect = 3e-19
 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 33/200 (16%)

Query: 297 GVDSESFHPRFRSS-------EMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRL 348
           G+D   ++  + +         +  +   G  +    + +GR    +K +D L + ++ L
Sbjct: 5   GIDCSFWNESYLTGSRDERKKSLLSKF--GMDEGVTFMFIGRFDRGQKGVDVLLKAIEIL 62

Query: 349 ------PEARIAFIGDGPYREELEKMFTGMPAVFTGMLLG-----EELS-QAYASGDVFV 396
                  E R   IG G    ELE     +      + +       E   + Y S D  +
Sbjct: 63  SSKKEFQEMRFIIIGKG--DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVI 120

Query: 397 MPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKL 454
           +PS  E  GLV LEAM  G IP+    A GG+ DII    +   G L   GD  +  + +
Sbjct: 121 IPSYFEPFGLVALEAMCLGAIPI--ASAVGGLRDII---TNET-GILVKAGDPGELANAI 174

Query: 455 E-PLLYNQELRETMGQAARQ 473
              L  ++       +  ++
Sbjct: 175 LKALELSRSDLSKFRENCKK 194

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485

 Score = 76.8 bits (190), Expect = 4e-15
 Identities = 42/186 (22%), Positives = 68/186 (36%), Gaps = 27/186 (14%)

Query: 320 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVFT 377
           +   PL   + RL  +K +D +   +D +     R+  +G G     LE       +   
Sbjct: 288 DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAG--DVALEGALLAAASRHH 345

Query: 378 GML---LG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPD- 428
           G +   +G  E LS    A  D  ++PS  E  GL  L A+  G IPV  V   GG+ D 
Sbjct: 346 GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPV--VARTGGLADT 403

Query: 429 IIPEDQDGKI-----GYLF---NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YD 479
           +I  +          G  F       L   + +     ++ +L   M +     M+    
Sbjct: 404 VIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLG---MKSDVS 460

Query: 480 WRAATR 485
           W  +  
Sbjct: 461 WEKSAG 466

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485

 Score = 74.1 bits (183), Expect = 3e-14
 Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 29/186 (15%)

Query: 321 PDKPLIVHVGRLGVEKSLDFLKRVMDRLPE--ARIAFIGDGPYREELEKMFTGMPAVFTG 378
              PL   V RL  +K LD +   +  L E   ++A +G G     L++ F    A + G
Sbjct: 290 DKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAG--DPVLQEGFLAAAAEYPG 347

Query: 379 ML---LG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GGIPD-I 429
            +   +G  E  S +     DV ++PS  E  GL  L  +  G +P+  VR  GG+ D +
Sbjct: 348 QVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPL--VRRTGGLADTV 405

Query: 430 IPEDQDGKI-----GYLF---NPGDLDDCLSK-LEPLLYNQELRETMGQAARQEMEK-YD 479
                +        G++F   N   L   + +     L+++          RQ M   + 
Sbjct: 406 SDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFV--LWSR--PSLWRFVQRQAMAMDFS 461

Query: 480 WRAATR 485
           W+ A +
Sbjct: 462 WQVAAK 467

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439

 Score = 70.6 bits (174), Expect = 3e-13
 Identities = 45/184 (24%), Positives = 70/184 (38%), Gaps = 30/184 (16%)

Query: 321 PDKPLIVHVGRLGVE-KSLDFLKRVMDRL------PEARIAFIGDGPYREELEKMFTGMP 373
            +    + +GR     K +D L + ++ L       E R   IG G    ELE     + 
Sbjct: 249 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG--DPELEGWARSLE 306

Query: 374 AVFTGML---LG--EELS-QAYASGDVFVMPSESETLGLVVLEAMSSG-IPVVGVRA-GG 425
                +         E   + Y S D  ++PS  E  GLV LEAM  G IP+    A GG
Sbjct: 307 EKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPI--ASAVGG 364

Query: 426 IPDIIPEDQDGKIGYLF---NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK-YDWR 481
           + DII    +   G L    +PG+L + + K   L  +   +        ++    + W 
Sbjct: 365 LRDII---TNET-GILVKAGDPGELANAILKALELSRSDLSKFRE---NCKKRAMSFSWE 417

Query: 482 AATR 485
            +  
Sbjct: 418 KSAE 421

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Length = 406

 Score = 61.3 bits (148), Expect = 3e-10
 Identities = 41/270 (15%), Positives = 77/270 (28%), Gaps = 65/270 (24%)

Query: 262 LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP 321
           +    D+  + S A+     AA V + + +     GVD                  +   
Sbjct: 175 VAPTLDVIALVSPAM-----AAEVVSRDNVFHVGHGVDHNLDQLG---------DPSPYA 220

Query: 322 DKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAV-FTGML 380
           +    V VG +  +   +F        P+     IG G  R            V   G +
Sbjct: 221 EGIHAVAVGSMLFD--PEFFVVASKAFPQVTFHVIGSGMGRHPGY-----GDNVIVYGEM 273

Query: 381 LGEELSQAYASGDVFVMPSESETLGLV-------VLEAMSSGIPVVGVRAGGIPDIIPED 433
              +           + P  SE + +        +L+    G+P V       P+ +   
Sbjct: 274 KHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAV------CPNAVVGP 327

Query: 434 QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYN 493
              + GY   PG+ D  ++ +   L    +R           +  +W   T         
Sbjct: 328 YKSRFGYT--PGNADSVIAAITQALEAPRVRY---------RQCLNWSDTTD-------- 368

Query: 494 AAIWFWRKKRAQLLRPIQWLAKRIFPSAEV 523
                      ++L P  +   R++P    
Sbjct: 369 -----------RVLDPRAYPETRLYPHPPT 387

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725

 Score = 50.6 bits (120), Expect = 1e-06
 Identities = 17/116 (14%), Positives = 33/116 (28%), Gaps = 16/116 (13%)

Query: 380 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIG 439
           +LG +  +      + V PS  E  G    E    G+P +     G    + +  +    
Sbjct: 507 ILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQA 566

Query: 440 --------------YLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWR 481
                            +   L D + +   +   +  R     A     +  DW+
Sbjct: 567 KDYGIYIVDRRFKAPDESVEQLVDYMEEF--VKKTRRQRINQRNATEALSDLLDWK 620

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 2e-04
 Identities = 65/447 (14%), Positives = 127/447 (28%), Gaps = 137/447 (30%)

Query: 63  DYLRVNSEKSRKRLEGLVVRDSDNSRQSNMTISEVREDEVEAPLLDPEINENNSRPRRIA 122
           D L V  +      +    +D  +  +S ++  E+ +  + +   D       S   R+ 
Sbjct: 20  DILSVFEDAFVDNFD---CKDVQDMPKSILSKEEI-DHIIMSK--DAV-----SGTLRLF 68

Query: 123 LFVEPSPFSYVSGYKNRFQNFIKYLRE-----MGDEVMVVTTHEGVPQEFYGAKLIGSRS 177
             +           +   Q F++ +       +   +        +    Y    I  R 
Sbjct: 69  WTLLSKQ-------EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY----IEQRD 117

Query: 178 FPCPWYQKVPLSLALSPRIISEVARFKP--DIIHA-----SSPGIMVFGALIIAK-LLCV 229
                Y    +    +      V+R +P   +  A      +  +++ G L   K  + +
Sbjct: 118 ---RLYNDNQV---FAKY---NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL 168

Query: 230 PIVMSYHTHV----PVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARV 285
            + +SY         ++             WL +K  +    + L     +   ++    
Sbjct: 169 DVCLSYKVQCKMDFKIF-------------WLNLKNCNSPETV-LEMLQKLLYQIDPN-- 212

Query: 286 TAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKP----LIV--HVGRLGVEKSLD 339
                   W    D  S + + R   ++  L      KP    L+V  +V       + +
Sbjct: 213 --------WTSRSDH-SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN 263

Query: 340 F----L-----KRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYA 390
                L     K+V D L  A             L+          T             
Sbjct: 264 LSCKILLTTRFKQVTDFLSAAT-------TTHISLDHHSMT----LT------------- 299

Query: 391 SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP---DIIPE-DQDGKI---GYLFN 443
                  P E ++L L  L+     +P   +     P    II E  +DG      +   
Sbjct: 300 -------PDEVKSLLLKYLDCRPQDLPREVL--TTNPRRLSIIAESIRDGLATWDNWKHV 350

Query: 444 PGD-----LDDCLSKLEPLLYNQELRE 465
             D     ++  L+ LEP     E R+
Sbjct: 351 NCDKLTTIIESSLNVLEP----AEYRK 373

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	526
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	100.0
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	100.0
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	100.0
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	100.0
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	100.0
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	100.0
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	100.0
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	100.0
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	100.0
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	100.0
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	100.0
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	100.0
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	100.0
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	100.0
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	100.0
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	100.0
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	100.0
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	100.0
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	100.0
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	99.98
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	99.97
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.96
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.96
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.95
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.95
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.95
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	99.94
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.94
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.92
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.91
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.91
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.91
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.91
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.88
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.86
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.84
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.83
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.83
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.83
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.79
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.76
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.7
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.67
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.62
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.61
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.56
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.49
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.49
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	99.38
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	99.38
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.32
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	99.3
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	99.15
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	99.0
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	98.97
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	98.89
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	98.88
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	98.83
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	98.77
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	98.5
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	98.07
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	97.95
3tov_A	349	Glycosyl transferase family 9; structural genomics	97.94
1xv5_A	401	AGT, DNA alpha-glucosyltransferase; HET: DNA CME U	97.86
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	96.99
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	96.1
2lpm_A	123	Two-component response regulator; transcription re	92.98
4g65_A	461	TRK system potassium uptake protein TRKA; structur	91.82
3tqr_A	215	Phosphoribosylglycinamide formyltransferase; purin	91.08
3auf_A	229	Glycinamide ribonucleotide transformylase 1; struc	89.37
3to5_A	134	CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, p	88.93
2ywr_A	216	Phosphoribosylglycinamide formyltransferase; rossm	87.81
3av3_A	212	Phosphoribosylglycinamide formyltransferase; struc	87.65
1fmt_A	314	Methionyl-tRNA FMet formyltransferase; initiator t	86.73
2d1p_A	140	TUSD, hypothetical UPF0163 protein YHEN; tRNA modi	86.38
3kcq_A	215	Phosphoribosylglycinamide formyltransferase; struc	86.19
3h75_A	350	Periplasmic sugar-binding domain protein; protein	85.64
3qk7_A	294	Transcriptional regulators; structural genomics, N	85.15
3h5i_A	140	Response regulator/sensory box protein/ggdef domai	84.78
3da8_A	215	Probable 5'-phosphoribosylglycinamide formyltransf	84.44
3q0i_A	318	Methionyl-tRNA formyltransferase; structural genom	84.26
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	83.32
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	83.23
3o74_A	272	Fructose transport system repressor FRUR; dual tra	83.14
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	83.09
3jte_A	143	Response regulator receiver protein; structural ge	82.9
2hy5_A	130	Putative sulfurtransferase DSRE; DSRE, DSRF, sulfu	82.73
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	82.61
4ds3_A	209	Phosphoribosylglycinamide formyltransferase; struc	82.49
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	82.28
3grc_A	140	Sensor protein, kinase; protein structure initiati	82.25
3g1w_A	305	Sugar ABC transporter; sugar-binding protein, baci	82.2
3egc_A	291	Putative ribose operon repressor; structural genom	81.81
2bw0_A	329	10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase	81.64
1jkx_A	212	GART;, phosphoribosylglycinamide formyltransferase	81.63
3fet_A	166	Electron transfer flavoprotein subunit alpha RELA	81.54
3dbi_A	338	Sugar-binding transcriptional regulator, LACI FAM;	80.94
1kjn_A	157	MTH0777; hypotethical protein, structural genomics	80.7

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=100.00  E-value=6.2e-46  Score=380.61  Aligned_cols=373  Identities=21%  Similarity=0.263  Sum_probs=289.7

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc---------------------ccCceeccc
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE---------------------FYGAKLIGS  175 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~---------------------~~~~~~~~~  175 (526)
                      ++|||++++..++.+..||.+.++.+++++|+++||+|+|+++.......                     ..++.+..+
T Consensus         1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~   80 (439)
T 3fro_A            1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI   80 (439)
T ss_dssp             CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred             CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence            57999999876653578999999999999999999999999987654321                     122222222


Q ss_pred             cc--cCCC-ccc----c-ccchhcccHHHHHHHH-----hcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccc
Q 009759          176 RS--FPCP-WYQ----K-VPLSLALSPRIISEVA-----RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVY  242 (526)
Q Consensus       176 ~~--~~~~-~~~----~-~~~~~~~~~~l~~~l~-----~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~  242 (526)
                      ..  +... .+.    . ......+...+.++++     +.+||+||+|.+... +.+.++++..++|+|+++|+.....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~-~~~~~~~~~~~~~~v~~~h~~~~~~  159 (439)
T 3fro_A           81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTV-FAGALIKKYFKIPAVFTIHRLNKSK  159 (439)
T ss_dssp             ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGH-HHHHHHHHHHCCCEEEEESCCCCCC
T ss_pred             cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhh-hhHHHHhhccCCCEEEEeccccccc
Confidence            21  0000 000    0 1111112334444444     449999999986543 3345566788999999999986543


Q ss_pred             ccccccc--cc----cchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCc-------cc
Q 009759          243 IPRYTFS--WL----VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRF-------RS  309 (526)
Q Consensus       243 ~~~~~~~--~~----~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~-------~~  309 (526)
                      .......  ..    .......++.+++.+|.++++|+..++.....+..+..++.+||||+|.+.|.+..       ..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~  239 (439)
T 3fro_A          160 LPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERK  239 (439)
T ss_dssp             EEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHH
T ss_pred             CchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhH
Confidence            2221100  00    11111567888999999999999998886655445678999999999999887652       23


Q ss_pred             HHHHHhhcCCCCCCcEEEEEeccc-ccccHHHHHHHHHhC------CCcEEEEEeCCccH--HHHHHHhcCC--CeEEec
Q 009759          310 SEMRWRLSNGEPDKPLIVHVGRLG-VEKSLDFLKRVMDRL------PEARIAFIGDGPYR--EELEKMFTGM--PAVFTG  378 (526)
Q Consensus       310 ~~~~~~~~~~~~~~~~i~~vG~l~-~~Kg~~~li~a~~~l------~~~~l~ivG~g~~~--~~l~~l~~~~--~V~~~g  378 (526)
                      ...+.++++ .++ ++|+|+|++. +.||++.+++|++.+      ++++|+|+|+|+..  +.+++++++.  .+.+.|
T Consensus       240 ~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g  317 (439)
T 3fro_A          240 KSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITE  317 (439)
T ss_dssp             HHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECS
T ss_pred             HHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcC
Confidence            455666655 334 8999999999 999999999999887      68999999999866  7788877654  477899


Q ss_pred             ccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhh
Q 009759          379 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL  458 (526)
Q Consensus       379 ~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll  458 (526)
                      +++.+++.++|+.||++|+||..|++|++++|||++|+|||+++.||..|++   +++ +|++++++|+++++++|.+++
T Consensus       318 ~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~---~~~-~g~~~~~~d~~~la~~i~~ll  393 (439)
T 3fro_A          318 MLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII---TNE-TGILVKAGDPGELANAILKAL  393 (439)
T ss_dssp             CCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHC---CTT-TCEEECTTCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeE---EcC-ceEEeCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999   776 999999999999999999999


Q ss_pred             h-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 009759          459 Y-NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIW  497 (526)
Q Consensus       459 ~-d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~  497 (526)
                      + |++.++++++++++.+++|+|+.++++++ ++|+++++
T Consensus       394 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~  432 (439)
T 3fro_A          394 ELSRSDLSKFRENCKKRAMSFSWEKSAERYV-KAYTGSID  432 (439)
T ss_dssp             HHTTTTTHHHHHHHHHHHHTSCHHHHHHHHH-HHHHTCSC
T ss_pred             hcCHHHHHHHHHHHHHHHhhCcHHHHHHHHH-HHHHHHHH
Confidence            9 99999999999999998899999999997 89998764

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=100.00  E-value=5.5e-44  Score=366.32  Aligned_cols=379  Identities=23%  Similarity=0.262  Sum_probs=282.6

Q ss_pred             CCCCCcEEEEEeccCCCC------ccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc-----ccCceeccccccCCCc
Q 009759          114 NNSRPRRIALFVEPSPFS------YVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE-----FYGAKLIGSRSFPCPW  182 (526)
Q Consensus       114 ~~~~~mkIliv~~~~p~~------~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~-----~~~~~~~~~~~~~~~~  182 (526)
                      ...+.|||++++..++..      ..||.+.++..++++|.++||+|++++........     ..++.+..+.......
T Consensus        16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~   95 (438)
T 3c48_A           16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEG   95 (438)
T ss_dssp             ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSS
T ss_pred             cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCccc
Confidence            356669999998765422      46999999999999999999999999976542111     1223333222211111


Q ss_pred             ccc--cc-chhcccHHHHHH-HHhc-CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccc--cccchH
Q 009759          183 YQK--VP-LSLALSPRIISE-VARF-KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFS--WLVKPM  255 (526)
Q Consensus       183 ~~~--~~-~~~~~~~~l~~~-l~~~-~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~--~~~~~~  255 (526)
                      ...  .. ....+...+.+. +++. +||+||+|.+. ..+.+..+++..++|+|+++|+............  ......
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~-~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~  174 (438)
T 3c48_A           96 LSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWL-SGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEAR  174 (438)
T ss_dssp             CCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHH-HHHHHHHHHHHHTCCEEEECSSCHHHHSCC----CCHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCcc-HHHHHHHHHHHcCCCEEEEecCCcccccccccccCCcchHHH
Confidence            110  11 011112233333 4444 49999999743 2334455667789999999999753221111000  001123


Q ss_pred             HHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCccc--HHHHHhhcCCCCCCcEEEEEeccc
Q 009759          256 WLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRS--SEMRWRLSNGEPDKPLIVHVGRLG  333 (526)
Q Consensus       256 ~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~vG~l~  333 (526)
                      ...++.+++.+|.++++|+..++.+.+.++.+..++.+++||+|.+.+.+....  ...+.+++. ..+.++|+|+|++.
T Consensus       175 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~  253 (438)
T 3c48_A          175 RICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGI-PLHTKVVAFVGRLQ  253 (438)
T ss_dssp             HHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTC-CSSSEEEEEESCBS
T ss_pred             HHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCC-CCCCcEEEEEeeec
Confidence            356678899999999999999999988666567899999999999888765321  225555554 45778999999999


Q ss_pred             ccccHHHHHHHHHhC----C--CcEEEEEeC----CccHHHHHHHhcC----CCeEEecccChhhHHHHHHcCcEEEecC
Q 009759          334 VEKSLDFLKRVMDRL----P--EARIAFIGD----GPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPS  399 (526)
Q Consensus       334 ~~Kg~~~li~a~~~l----~--~~~l~ivG~----g~~~~~l~~l~~~----~~V~~~g~v~~~~l~~~~~~aDv~v~ps  399 (526)
                      +.||++.++++++.+    |  +++|+|+|.    |++.+.+++++++    .+|.++|+++++++.++|+.||++|+||
T Consensus       254 ~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps  333 (438)
T 3c48_A          254 PFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPS  333 (438)
T ss_dssp             GGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECC
T ss_pred             ccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECc
Confidence            999999999999876    3  789999998    7777777777764    3699999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCC
Q 009759          400 ESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYD  479 (526)
Q Consensus       400 ~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs  479 (526)
                      ..|++|++++|||++|+|||+++.|+..+++   .++.+|++++++|+++++++|.++++|++.++++++++++.+++|+
T Consensus       334 ~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i---~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s  410 (438)
T 3c48_A          334 FNESFGLVAMEAQASGTPVIAARVGGLPIAV---AEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFS  410 (438)
T ss_dssp             SCCSSCHHHHHHHHTTCCEEEESCTTHHHHS---CBTTTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCchHHHHHHHcCCCEEecCCCChhHHh---hCCCcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999   8889999999999999999999999999999999999999996699


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 009759          480 WRAATRTIRNEQYNAAIWF  498 (526)
Q Consensus       480 ~~~~~~~~~~~ly~~~l~~  498 (526)
                      |+.++++++ ++|++++..
T Consensus       411 ~~~~~~~~~-~~~~~~~~~  428 (438)
T 3c48_A          411 WAATAAQLS-SLYNDAIAN  428 (438)
T ss_dssp             HHHHHHHHH-HHHHHHHHT
T ss_pred             HHHHHHHHH-HHHHHHhhh
Confidence            999999997 899999865

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=100.00  E-value=3.5e-44  Score=374.04  Aligned_cols=382  Identities=18%  Similarity=0.215  Sum_probs=288.8

Q ss_pred             CCCCcEEEEEeccCCC----------CccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc--c----------ccCcee
Q 009759          115 NSRPRRIALFVEPSPF----------SYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ--E----------FYGAKL  172 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~----------~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~--~----------~~~~~~  172 (526)
                      +.++|||++++..++.          +..||.+.++.+++++|.++||+|+|++.......  .          ..++.+
T Consensus         4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v   83 (499)
T 2r60_A            4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRI   83 (499)
T ss_dssp             ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEE
T ss_pred             ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEE
Confidence            4556999999875432          24799999999999999999999999997643211  1          123333


Q ss_pred             ccccccCCCcccc--cc-chhcccHHHHHHHHh--cCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccc
Q 009759          173 IGSRSFPCPWYQK--VP-LSLALSPRIISEVAR--FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYT  247 (526)
Q Consensus       173 ~~~~~~~~~~~~~--~~-~~~~~~~~l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~  247 (526)
                      ..+..........  .. ....+...+.+++++  .+||+||+|.+. ..+.+.++++..++|+|++.|+..........
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~-~~~~~~~~~~~~~~p~v~~~H~~~~~~~~~~~  162 (499)
T 2r60_A           84 VRIPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGD-GGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLN  162 (499)
T ss_dssp             EEECCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHH-HHHHHHHHHHHHCCCEEEECSSCHHHHHHTTC
T ss_pred             EEecCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCc-chHHHHHHHHhcCCcEEEEccCcccccchhhc
Confidence            3222211111111  00 011123456777777  589999999753 33445556777899999999996543221110


Q ss_pred             c-----ccccc-----hHHHHHHHHhhcCcEEEeCChhHHHHHHHh--cc-c----CCCcEEEeecCCCCCCCCCCcc--
Q 009759          248 F-----SWLVK-----PMWLVIKFLHRAADLTLVPSVAIGKDLEAA--RV-T----AANKIRIWKKGVDSESFHPRFR--  308 (526)
Q Consensus       248 ~-----~~~~~-----~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~--~~-~----~~~ki~vi~ngid~~~~~~~~~--  308 (526)
                      .     .....     ....+++.+++.+|.++++|+..++.+.+.  ++ .    +..++.+||||+|.+.|.+...  
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~  242 (499)
T 2r60_A          163 VNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDK  242 (499)
T ss_dssp             CCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHH
T ss_pred             cCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhh
Confidence            0     00000     122456788999999999999999998876  54 4    5679999999999998876533  


Q ss_pred             -cHHHHHhhc-----CCCCCCcEEEEEecccccccHHHHHHHHHhCC-----CcEEEEEeC--Cc------c-------H
Q 009759          309 -SSEMRWRLS-----NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP-----EARIAFIGD--GP------Y-------R  362 (526)
Q Consensus       309 -~~~~~~~~~-----~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~-----~~~l~ivG~--g~------~-------~  362 (526)
                       ....+.+++     . ..+.++|+|+|++.+.||++.+++|++.+.     .++++|+|+  |+      .       .
T Consensus       243 ~~~~~r~~~~~~~~~~-~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~  321 (499)
T 2r60_A          243 IKAKITKYLERDLGSE-RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEIL  321 (499)
T ss_dssp             HHHHHHHHHHHHSCGG-GTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHH
T ss_pred             hHHHHHHHhccccccc-CCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHH
Confidence             144555554     3 456789999999999999999999999883     258999997  43      1       6


Q ss_pred             HHHHHHhcCC----CeEEecccChhhHHHHHHcC----cEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccC
Q 009759          363 EELEKMFTGM----PAVFTGMLLGEELSQAYASG----DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQ  434 (526)
Q Consensus       363 ~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~a----Dv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~  434 (526)
                      +++++++++.    +|+|+|+++++++..+|+.|    |++|+||..||+|++++|||++|+|||+++.||..|++   .
T Consensus       322 ~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v---~  398 (499)
T 2r60_A          322 GKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEIL---D  398 (499)
T ss_dssp             HHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHT---G
T ss_pred             HHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHh---c
Confidence            7777777643    69999999999999999999    99999999999999999999999999999999999999   7


Q ss_pred             CCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHHh
Q 009759          435 DGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTIRNEQYNAAIWFWRKK  502 (526)
Q Consensus       435 ~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~-~fs~~~~~~~~~~~ly~~~l~~~~~~  502 (526)
                      ++.+|++++++|+++++++|.++++|++.++++++++++.++ +|+|+.++++++ ++|++++...+.+
T Consensus       399 ~~~~g~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~-~~y~~~~~~~~~~  466 (499)
T 2r60_A          399 GGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYL-EVIQEIADRKDEE  466 (499)
T ss_dssp             GGTSSEEECTTCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHH-HHHHHHHHC----
T ss_pred             CCceEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhhhhh
Confidence            888999999999999999999999999999999999999995 599999999997 8999998865443

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=100.00  E-value=2.9e-44  Score=362.90  Aligned_cols=360  Identities=21%  Similarity=0.315  Sum_probs=290.5

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCC--ccc---cCceeccccccCCCccccccchh
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVP--QEF---YGAKLIGSRSFPCPWYQKVPLSL  190 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~  190 (526)
                      .++|||+++++.++ +..||.+.++.++++.|  .||+|+|++......  ..+   .+..+.....     .. .....
T Consensus         2 ~~~mkIl~v~~~~~-p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~   72 (394)
T 3okp_A            2 SASRKTLVVTNDFP-PRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPR-----SV-MLPTP   72 (394)
T ss_dssp             --CCCEEEEESCCT-TSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESS-----SS-CCSCH
T ss_pred             CCCceEEEEeCccC-CccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccc-----cc-cccch
Confidence            45799999998765 66899999999999999  699999999876533  111   1222222211     11 11123


Q ss_pred             cccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCC-EEEEEecCCcccccccccccccchHHHHHHHHhhcCcEE
Q 009759          191 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVP-IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  269 (526)
Q Consensus       191 ~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  269 (526)
                      .....+.+++++.+||+||++......+... +++..++| +|+++|+.....       ......+...+.+++.+|.+
T Consensus        73 ~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~-------~~~~~~~~~~~~~~~~~d~i  144 (394)
T 3okp_A           73 TTAHAMAEIIREREIDNVWFGAAAPLALMAG-TAKQAGASKVIASTHGHEVGW-------SMLPGSRQSLRKIGTEVDVL  144 (394)
T ss_dssp             HHHHHHHHHHHHTTCSEEEESSCTTGGGGHH-HHHHTTCSEEEEECCSTHHHH-------TTSHHHHHHHHHHHHHCSEE
T ss_pred             hhHHHHHHHHHhcCCCEEEECCcchHHHHHH-HHHhcCCCcEEEEeccchhhh-------hhcchhhHHHHHHHHhCCEE
Confidence            4556888999999999999998655444333 35666786 888999753311       11223446678889999999


Q ss_pred             EeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcc--cHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHh
Q 009759          270 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR--SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  347 (526)
Q Consensus       270 i~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~  347 (526)
                      +++|+..++.+.+.++ ...++.+++||+|.+.+.+...  ....+.+++. .++.++|+|+|++.+.||++.++++++.
T Consensus       145 i~~s~~~~~~~~~~~~-~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~  222 (394)
T 3okp_A          145 TYISQYTLRRFKSAFG-SHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQ  222 (394)
T ss_dssp             EESCHHHHHHHHHHHC-SSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHH
T ss_pred             EEcCHHHHHHHHHhcC-CCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHH
Confidence            9999999999999876 4579999999999998876322  2445555554 4566899999999999999999999987


Q ss_pred             C----CCcEEEEEeCCccHHHHHHHhcC--CCeEEecccChhhHHHHHHcCcEEEecCCC-------CCCcHHHHHHHHc
Q 009759          348 L----PEARIAFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSES-------ETLGLVVLEAMSS  414 (526)
Q Consensus       348 l----~~~~l~ivG~g~~~~~l~~l~~~--~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~-------e~~~~~ilEAma~  414 (526)
                      +    ++++|+|+|+|++.+.+++++.+  .+|+++|+++++++.++|+.||++|+||..       |++|++++|||++
T Consensus       223 l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~  302 (394)
T 3okp_A          223 VIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC  302 (394)
T ss_dssp             HHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHT
T ss_pred             HHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHc
Confidence            7    78999999999999999888754  379999999999999999999999999998       9999999999999


Q ss_pred             CCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Q 009759          415 GIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME-KYDWRAATRTIRNEQYN  493 (526)
Q Consensus       415 G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~-~fs~~~~~~~~~~~ly~  493 (526)
                      |+|||+++.|+..|++   .++ +|++++++|+++++++|.++++|++.++++++++++.++ +|+|+.++++++ ++|+
T Consensus       303 G~PvI~~~~~~~~e~i---~~~-~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~  377 (394)
T 3okp_A          303 GVPVIAGTSGGAPETV---TPA-TGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLT-NILQ  377 (394)
T ss_dssp             TCCEEECSSTTGGGGC---CTT-TEEECCTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHH-HHHH
T ss_pred             CCCEEEeCCCChHHHH---hcC-CceEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHH
Confidence            9999999999999999   888 999999999999999999999999999999999999995 799999999997 8998


Q ss_pred             HHHHHH
Q 009759          494 AAIWFW  499 (526)
Q Consensus       494 ~~l~~~  499 (526)
                      ++....
T Consensus       378 ~~~r~~  383 (394)
T 3okp_A          378 SEPRKL  383 (394)
T ss_dssp             SCCC--
T ss_pred             HhccCc
Confidence            876443

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=100.00  E-value=1.4e-43  Score=358.19  Aligned_cols=366  Identities=20%  Similarity=0.324  Sum_probs=281.6

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCC--ccccCceeccccccCCCccccccchhcccHH
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVP--QEFYGAKLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      .|+.-+....+  |..||.+.++..++++|+++||+|++++......  ....++....+.....+........+.....
T Consensus        13 ~~~~~~~~~~~--p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~   90 (394)
T 2jjm_A           13 HMKLKIGITCY--PSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASK   90 (394)
T ss_dssp             --CCEEEEECC--C--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----CCSCCHHHHHHHH
T ss_pred             hheeeeehhcC--CCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccccccccccHHHHHH
Confidence            35554555443  4579999999999999999999999999754321  1112222222221111112222233445567


Q ss_pred             HHHHHHhcCCCEEEECCCchHHHHHHHHHHhc--CCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCC
Q 009759          196 IISEVARFKPDIIHASSPGIMVFGALIIAKLL--CVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPS  273 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S  273 (526)
                      +.+++++.+||+||+|......+.+.+..+..  ++|+|+++|+........      ......+++.+++.+|.++++|
T Consensus        91 l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~------~~~~~~~~~~~~~~ad~ii~~s  164 (394)
T 2jjm_A           91 MAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGS------DPSLNNLIRFGIEQSDVVTAVS  164 (394)
T ss_dssp             HHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTT------CTTTHHHHHHHHHHSSEEEESC
T ss_pred             HHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCC------CHHHHHHHHHHHhhCCEEEECC
Confidence            88888999999999997654444444444443  599999999853211111      1123456778889999999999


Q ss_pred             hhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC---CC
Q 009759          274 VAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---PE  350 (526)
Q Consensus       274 ~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l---~~  350 (526)
                      +..++.+.+.++. ..++.++|||+|.+.+.+. .....+.+++. .++.++|+|+|++.+.||++.++++++.+   ++
T Consensus       165 ~~~~~~~~~~~~~-~~~~~vi~ngv~~~~~~~~-~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~  241 (394)
T 2jjm_A          165 HSLINETHELVKP-NKDIQTVYNFIDERVYFKR-DMTQLKKEYGI-SESEKILIHISNFRKVKRVQDVVQAFAKIVTEVD  241 (394)
T ss_dssp             HHHHHHHHHHTCC-SSCEEECCCCCCTTTCCCC-CCHHHHHHTTC-C---CEEEEECCCCGGGTHHHHHHHHHHHHHSSC
T ss_pred             HHHHHHHHHhhCC-cccEEEecCCccHHhcCCc-chHHHHHHcCC-CCCCeEEEEeeccccccCHHHHHHHHHHHHhhCC
Confidence            9999999988763 5799999999999988765 34455555543 35678999999999999999999999887   46


Q ss_pred             cEEEEEeCCccHHHHHHHhcCC----CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC
Q 009759          351 ARIAFIGDGPYREELEKMFTGM----PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI  426 (526)
Q Consensus       351 ~~l~ivG~g~~~~~l~~l~~~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~  426 (526)
                      ++|+|+|+|+..+.+++++++.    +|.++|+.  +++.++|+.||++|+||..|++|++++|||++|+|||+++.|+.
T Consensus       242 ~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~  319 (394)
T 2jjm_A          242 AKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGI  319 (394)
T ss_dssp             CEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSC--SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTS
T ss_pred             CEEEEECCchHHHHHHHHHHHcCCCCeEEEeCch--hhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCCh
Confidence            9999999999888998888764    59999974  79999999999999999999999999999999999999999999


Q ss_pred             CceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHH
Q 009759          427 PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQYNAAIWFWR  500 (526)
Q Consensus       427 ~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~ly~~~l~~~~  500 (526)
                      .|++   +++.+|++++++|+++++++|.++++|++.++++++++++.+ ++|+|+.++++++ ++|+++++..+
T Consensus       320 ~e~v---~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~  390 (394)
T 2jjm_A          320 PEVI---QHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYE-TIYYDVLRDDK  390 (394)
T ss_dssp             TTTC---CBTTTEEEECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHH-HHHHHTC----
T ss_pred             HHHh---hcCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhhh
Confidence            9999   888999999999999999999999999999999999999999 7999999999997 89999987643

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=100.00  E-value=2.2e-43  Score=358.04  Aligned_cols=361  Identities=20%  Similarity=0.286  Sum_probs=278.9

Q ss_pred             CCCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCcccc---ccchh
Q 009759          114 NNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQK---VPLSL  190 (526)
Q Consensus       114 ~~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  190 (526)
                      ...++|||++++..++ +..||.+.++..++++|.++||+|++++....... ...........+..+....   .....
T Consensus        16 ~~~~~MkIl~i~~~~~-~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (406)
T 2gek_A           16 PRGSHMRIGMVCPYSF-DVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVK-LPDYVVSGGKAVPIPYNGSVARLRFGP   93 (406)
T ss_dssp             -----CEEEEECSSCT-TSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSC-CCTTEEECCCCC------------CCH
T ss_pred             cCCCcceEEEEeccCC-CCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcccc-CCcccccCCcEEeccccCCcccccccH
Confidence            4566799999986533 56699999999999999999999999998664331 1111111111122221111   11112


Q ss_pred             cccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEE
Q 009759          191 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  270 (526)
Q Consensus       191 ~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  270 (526)
                      .....+.+++++.+||+||++......+ ...+++..++|+|+++|+..+...       .........+.+++.+|.++
T Consensus        94 ~~~~~l~~~l~~~~~Dii~~~~~~~~~~-~~~~~~~~~~~~i~~~h~~~~~~~-------~~~~~~~~~~~~~~~~d~ii  165 (406)
T 2gek_A           94 ATHRKVKKWIAEGDFDVLHIHEPNAPSL-SMLALQAAEGPIVATFHTSTTKSL-------TLSVFQGILRPYHEKIIGRI  165 (406)
T ss_dssp             HHHHHHHHHHHHHCCSEEEEECCCSSSH-HHHHHHHEESSEEEEECCCCCSHH-------HHHHHHSTTHHHHTTCSEEE
T ss_pred             HHHHHHHHHHHhcCCCEEEECCccchHH-HHHHHHhcCCCEEEEEcCcchhhh-------hHHHHHHHHHHHHhhCCEEE
Confidence            2335788888889999999998755444 445566679999999999654321       01111112236789999999


Q ss_pred             eCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecc-cccccHHHHHHHHHhC-
Q 009759          271 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDFLKRVMDRL-  348 (526)
Q Consensus       271 ~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l-~~~Kg~~~li~a~~~l-  348 (526)
                      ++|+..++.+.+.++  ..++ ++|||+|.+.+.+......       ...+.++++|+|++ .+.||++.+++++..+ 
T Consensus       166 ~~s~~~~~~~~~~~~--~~~~-vi~~~v~~~~~~~~~~~~~-------~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~  235 (406)
T 2gek_A          166 AVSDLARRWQMEALG--SDAV-EIPNGVDVASFADAPLLDG-------YPREGRTVLFLGRYDEPRKGMAVLLAALPKLV  235 (406)
T ss_dssp             ESSHHHHHHHHHHHS--SCEE-ECCCCBCHHHHHTCCCCTT-------CSCSSCEEEEESCTTSGGGCHHHHHHHHHHHH
T ss_pred             ECCHHHHHHHHHhcC--CCcE-EecCCCChhhcCCCchhhh-------ccCCCeEEEEEeeeCccccCHHHHHHHHHHHH
Confidence            999999999987553  4688 9999999876644322110       12256799999999 9999999999999887 


Q ss_pred             ---CCcEEEEEeCCccHHHHHHHhcC--CCeEEecccChhhHHHHHHcCcEEEecCC-CCCCcHHHHHHHHcCCcEEEeC
Q 009759          349 ---PEARIAFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSE-SETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       349 ---~~~~l~ivG~g~~~~~l~~l~~~--~~V~~~g~v~~~~l~~~~~~aDv~v~ps~-~e~~~~~ilEAma~G~PvI~~~  422 (526)
                         ++++|+|+|.|+. +.+++++++  .+|+++|+++++++.++|+.||++|+||. .|++|++++|||++|+|||+++
T Consensus       236 ~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~  314 (406)
T 2gek_A          236 ARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASD  314 (406)
T ss_dssp             TTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECC
T ss_pred             HHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEec
Confidence               6899999999987 888887764  47999999999999999999999999996 9999999999999999999999


Q ss_pred             CCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Q 009759          423 AGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFW  499 (526)
Q Consensus       423 ~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~~~  499 (526)
                      .|+..+++   .++.+|++++++|+++++++|.++++|++.++++++++++.+++|+|+.+++++. ++|+++++..
T Consensus       315 ~~~~~e~i---~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~  387 (406)
T 2gek_A          315 LDAFRRVL---ADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQIM-RVYETVSGAG  387 (406)
T ss_dssp             CHHHHHHH---TTTTSSEECCTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHHHH-HHHHHHCCTT
T ss_pred             CCcHHHHh---cCCCceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhc
Confidence            99999999   8889999999999999999999999999999999999999999999999999997 8999987653

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=100.00  E-value=3.6e-43  Score=365.44  Aligned_cols=376  Identities=16%  Similarity=0.209  Sum_probs=265.6

Q ss_pred             CCCCcEEEEE-eccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcccc---------------Cceec-----
Q 009759          115 NSRPRRIALF-VEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFY---------------GAKLI-----  173 (526)
Q Consensus       115 ~~~~mkIliv-~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~---------------~~~~~-----  173 (526)
                      ..+.||||++ ++..|+.+.||.+.++..|.++|+++||+|.|+++.++......               ...+.     
T Consensus         6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (536)
T 3vue_A            6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKR   85 (536)
T ss_dssp             --CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEET
T ss_pred             CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEEC
Confidence            4567999999 45668888999999999999999999999999998764321100               00000     


Q ss_pred             ccccc--CCC-cccc--------cc-------------chhcccHHHHHHHHh-------------cCCCEEEECCCchH
Q 009759          174 GSRSF--PCP-WYQK--------VP-------------LSLALSPRIISEVAR-------------FKPDIIHASSPGIM  216 (526)
Q Consensus       174 ~~~~~--~~~-~~~~--------~~-------------~~~~~~~~l~~~l~~-------------~~pDiV~~~~~~~~  216 (526)
                      ++..+  ..+ ++.+        +.             ....+.....+.++.             ..+||+|+|+|+..
T Consensus        86 gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~  165 (536)
T 3vue_A           86 GVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTG  165 (536)
T ss_dssp             TEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGS
T ss_pred             CceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHH
Confidence            00000  000 0000        00             000111222222221             24578889998765


Q ss_pred             HHHHHHHHHh------cCCCEEEEEecCCccccc------cccccc---------------ccchHHHHHHHHhhcCcEE
Q 009759          217 VFGALIIAKL------LCVPIVMSYHTHVPVYIP------RYTFSW---------------LVKPMWLVIKFLHRAADLT  269 (526)
Q Consensus       217 ~~~~~~~~~~------~~~p~v~~~h~~~~~~~~------~~~~~~---------------~~~~~~~~~~~~~~~ad~i  269 (526)
                      ..+.++....      .++|+|+|+|+.......      ......               .......+++..+..||.|
T Consensus       166 l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v  245 (536)
T 3vue_A          166 PLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRV  245 (536)
T ss_dssp             THHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEE
T ss_pred             HHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEE
Confidence            5544433222      378999999985432110      000000               0000113577888999999


Q ss_pred             EeCChhHHHHHHHhcc--------cCCCcEEEeecCCCCCCCCCCcc-------------------cHHHHHhhcCC-CC
Q 009759          270 LVPSVAIGKDLEAARV--------TAANKIRIWKKGVDSESFHPRFR-------------------SSEMRWRLSNG-EP  321 (526)
Q Consensus       270 i~~S~~~~~~l~~~~~--------~~~~ki~vi~ngid~~~~~~~~~-------------------~~~~~~~~~~~-~~  321 (526)
                      +++|+.+++++.+.++        ....++.+|+||||.+.|.|..+                   +..++.++++. .+
T Consensus       246 ~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~  325 (536)
T 3vue_A          246 LTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDR  325 (536)
T ss_dssp             EESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCT
T ss_pred             EEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCC
Confidence            9999999999876432        23568999999999999987532                   12334444543 45


Q ss_pred             CCcEEEEEecccccccHHHHHHHHHhC--CCcEEEEEeCCcc--HHHHHHHhcC--CCeEEecccChhhHHHHHHcCcEE
Q 009759          322 DKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPY--REELEKMFTG--MPAVFTGMLLGEELSQAYASGDVF  395 (526)
Q Consensus       322 ~~~~i~~vG~l~~~Kg~~~li~a~~~l--~~~~l~ivG~g~~--~~~l~~l~~~--~~V~~~g~v~~~~l~~~~~~aDv~  395 (526)
                      +.++|+|+||+.++||++.+++|+.++  .+.+++++|.|+.  ...++.....  .++.+.+..+.+++..+|+.||++
T Consensus       326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~  405 (536)
T 3vue_A          326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVL  405 (536)
T ss_dssp             TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEE
T ss_pred             CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhee
Confidence            788999999999999999999999987  4789999998753  3344444433  379999999999999999999999


Q ss_pred             EecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeE----------eeCCCCHHHHHHHHHHhhh--CHHH
Q 009759          396 VMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY----------LFNPGDLDDCLSKLEPLLY--NQEL  463 (526)
Q Consensus       396 v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~----------~~~~~d~~~la~ai~~ll~--d~~~  463 (526)
                      |+||++|+||++++|||+||+|||++++||++|++   .++.+|+          ++++.|+++|+++|.+++.  +...
T Consensus       406 v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V---~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~  482 (536)
T 3vue_A          406 AVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTV---IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPA  482 (536)
T ss_dssp             EECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHC---CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHH
T ss_pred             ecccccCCCCHHHHHHHHcCCCEEEcCCCCchhee---eCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHH
Confidence            99999999999999999999999999999999999   8898988          6677789999999998776  4455


Q ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 009759          464 RETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  496 (526)
Q Consensus       464 ~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l  496 (526)
                      ++++.+++.+  ++|||++++++|+ ++|+++.
T Consensus       483 ~~~~~~~am~--~~fSW~~~A~~y~-~ly~~L~  512 (536)
T 3vue_A          483 YEEMVRNCMN--QDLSWKGPAKNWE-NVLLGLG  512 (536)
T ss_dssp             HHHHHHHHHH--SCCSSHHHHHHHH-HHHHTTC
T ss_pred             HHHHHHHHHH--hcCCHHHHHHHHH-HHHHHhh
Confidence            6777665532  5899999999997 8999873

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=100.00  E-value=1.4e-42  Score=360.69  Aligned_cols=373  Identities=17%  Similarity=0.188  Sum_probs=276.2

Q ss_pred             cEEEEEeccC-CCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-c-----------------------ccCceec
Q 009759          119 RRIALFVEPS-PFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-E-----------------------FYGAKLI  173 (526)
Q Consensus       119 mkIliv~~~~-p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~-----------------------~~~~~~~  173 (526)
                      |||++++..+ |....||.+.++.+++++|+++||+|+|++....... .                       ..++.+.
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~   80 (485)
T 2qzs_A            1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY   80 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred             CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence            8999998754 3335799999999999999999999999997642110 0                       0122222


Q ss_pred             cccc---cCCC--cccc-----c-c---chhcccHHHHHHHHh----cCCCEEEECCCchHHHHHHHHH-HhcCCCEEEE
Q 009759          174 GSRS---FPCP--WYQK-----V-P---LSLALSPRIISEVAR----FKPDIIHASSPGIMVFGALIIA-KLLCVPIVMS  234 (526)
Q Consensus       174 ~~~~---~~~~--~~~~-----~-~---~~~~~~~~l~~~l~~----~~pDiV~~~~~~~~~~~~~~~~-~~~~~p~v~~  234 (526)
                      .+..   +...  .+..     . .   ....+...+.++++.    .+||+||+|.+..... +.+++ +..++|+|++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~~~~~~p~v~t  159 (485)
T 2qzs_A           81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLA-PAYLAARGRPAKSVFT  159 (485)
T ss_dssp             EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTH-HHHHHHTTCSSEEEEE
T ss_pred             EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHH-HHHHhhccCCCCEEEE
Confidence            1110   0000  0000     0 0   000122345555553    7999999998654333 33344 6789999999


Q ss_pred             EecCCcccc-ccc-------ccccc------cchHHHHHHHHhhcCcEEEeCChhHHHHHHHh-ccc--------CC--C
Q 009759          235 YHTHVPVYI-PRY-------TFSWL------VKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA-RVT--------AA--N  289 (526)
Q Consensus       235 ~h~~~~~~~-~~~-------~~~~~------~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~-~~~--------~~--~  289 (526)
                      +|+...... ...       .....      ......+++.+++.+|.++++|+..++.+.+. ++.        +.  .
T Consensus       160 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (485)
T 2qzs_A          160 VHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREG  239 (485)
T ss_dssp             ESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTT
T ss_pred             ecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCC
Confidence            999753211 100       00000      00011456778899999999999999988764 221        12  6


Q ss_pred             cEEEeecCCCCCCCCCCcc------------------cHHHHHhhcCCC-CCCcEEEEEecccccccHHHHHHHHHhC--
Q 009759          290 KIRIWKKGVDSESFHPRFR------------------SSEMRWRLSNGE-PDKPLIVHVGRLGVEKSLDFLKRVMDRL--  348 (526)
Q Consensus       290 ki~vi~ngid~~~~~~~~~------------------~~~~~~~~~~~~-~~~~~i~~vG~l~~~Kg~~~li~a~~~l--  348 (526)
                      ++.+||||+|.+.|.+...                  ...++.++++.. .+.++|+|+||+.+.||++.+++|++.+  
T Consensus       240 ~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~  319 (485)
T 2qzs_A          240 RLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE  319 (485)
T ss_dssp             CEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH
T ss_pred             ceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh
Confidence            8999999999998876532                  345666666532 2678999999999999999999999988  


Q ss_pred             CCcEEEEEeCCc--cHHHHHHHhcC--CCeE-EecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCC
Q 009759          349 PEARIAFIGDGP--YREELEKMFTG--MPAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  423 (526)
Q Consensus       349 ~~~~l~ivG~g~--~~~~l~~l~~~--~~V~-~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~  423 (526)
                      ++++|+|+|+|+  +.+.+++++.+  .+|. +.|+ +.+++..+|+.||++|+||.+|++|++++|||+||+|||+++.
T Consensus       320 ~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~  398 (485)
T 2qzs_A          320 QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRT  398 (485)
T ss_dssp             TTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS
T ss_pred             CCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCC
Confidence            589999999885  56777777765  3686 7888 7778899999999999999999999999999999999999999


Q ss_pred             CCCCceecccCCC---------ceeEeeCCCCHHHHHHHHHHhh---hCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 009759          424 GGIPDIIPEDQDG---------KIGYLFNPGDLDDCLSKLEPLL---YNQELRETMGQAARQEMEKYDWRAATRTIRNEQ  491 (526)
Q Consensus       424 gg~~e~v~~~~~~---------~~g~~~~~~d~~~la~ai~~ll---~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~l  491 (526)
                      ||..|++   .++         .+|++++++|+++++++|.+++   +|++.++++++++++  ++|||+.++++++ ++
T Consensus       399 gg~~e~v---~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~-~l  472 (485)
T 2qzs_A          399 GGLADTV---SDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYR-EL  472 (485)
T ss_dssp             HHHHHHC---CBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHH-HH
T ss_pred             CCcccee---ccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHH-HH
Confidence            9999999   777         8999999999999999999999   799999999998874  6899999999997 89


Q ss_pred             HHHHHHHH
Q 009759          492 YNAAIWFW  499 (526)
Q Consensus       492 y~~~l~~~  499 (526)
                      |++++...
T Consensus       473 y~~~~~~~  480 (485)
T 2qzs_A          473 YYRLKLEH  480 (485)
T ss_dssp             HHHHC---
T ss_pred             HHHhhhhh
Confidence            99887654

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=100.00  E-value=3.4e-43  Score=365.25  Aligned_cols=372  Identities=16%  Similarity=0.156  Sum_probs=276.0

Q ss_pred             cEEEEEeccCC-CCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-c------------------------ccCcee
Q 009759          119 RRIALFVEPSP-FSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-E------------------------FYGAKL  172 (526)
Q Consensus       119 mkIliv~~~~p-~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~------------------------~~~~~~  172 (526)
                      |||++++..++ ....||.+.++.+++++|.++||+|+|++....... .                        ..++.+
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v   80 (485)
T 1rzu_A            1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL   80 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred             CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence            89999987553 235799999999999999999999999997643210 0                        012222


Q ss_pred             cccccc---CCC--cccc-----c-c---chhcccHHHHHHHH----hcCCCEEEECCCchHHHHHHHHHHh--cCCCEE
Q 009759          173 IGSRSF---PCP--WYQK-----V-P---LSLALSPRIISEVA----RFKPDIIHASSPGIMVFGALIIAKL--LCVPIV  232 (526)
Q Consensus       173 ~~~~~~---~~~--~~~~-----~-~---~~~~~~~~l~~~l~----~~~pDiV~~~~~~~~~~~~~~~~~~--~~~p~v  232 (526)
                      ..+...   ...  .+..     . .   ....+...+.++++    +.+|||||+|.+... +.+.++++.  .++|+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~-~~~~~~~~~~~~~~p~v  159 (485)
T 1rzu_A           81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAA-MTPVYMRYAETPEIPSL  159 (485)
T ss_dssp             EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHT-THHHHHHHSSSCCCCEE
T ss_pred             EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchh-HHHHHHhhcccCCCCEE
Confidence            211100   000  0000     0 0   00011223444443    679999999985332 223444443  799999


Q ss_pred             EEEecCCcccc-ccc-------ccccc----cc--hHHHHHHHHhhcCcEEEeCChhHHHHHHHh-cc--------cCCC
Q 009759          233 MSYHTHVPVYI-PRY-------TFSWL----VK--PMWLVIKFLHRAADLTLVPSVAIGKDLEAA-RV--------TAAN  289 (526)
Q Consensus       233 ~~~h~~~~~~~-~~~-------~~~~~----~~--~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~-~~--------~~~~  289 (526)
                      +++|+...... ...       .....    ..  ....+++.+++.+|.++++|+..++.+.+. ++        .+..
T Consensus       160 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~  239 (485)
T 1rzu_A          160 LTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAH  239 (485)
T ss_dssp             EEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGG
T ss_pred             EEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcC
Confidence            99999653211 100       00000    00  011356788899999999999999988764 22        2457


Q ss_pred             cEEEeecCCCCCCCCCCcc------------------cHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC--C
Q 009759          290 KIRIWKKGVDSESFHPRFR------------------SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--P  349 (526)
Q Consensus       290 ki~vi~ngid~~~~~~~~~------------------~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l--~  349 (526)
                      ++.+|+||+|.+.|.+...                  ...++.++++..++.++|+|+||+.+.||++.+++|++.+  +
T Consensus       240 ~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~  319 (485)
T 1rzu_A          240 VLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL  319 (485)
T ss_dssp             GEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT
T ss_pred             CceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHhc
Confidence            9999999999998876543                  3556667766443367999999999999999999999887  6


Q ss_pred             CcEEEEEeCCc--cHHHHHHHhcCC--CeE-EecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          350 EARIAFIGDGP--YREELEKMFTGM--PAV-FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       350 ~~~l~ivG~g~--~~~~l~~l~~~~--~V~-~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      +++|+|+|+|+  +.+.+++++.+.  +|. +.|+ +.+++..+|+.||++|+||.+|++|++++|||+||+|||+++.|
T Consensus       320 ~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~g  398 (485)
T 1rzu_A          320 GGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG  398 (485)
T ss_dssp             TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSH
T ss_pred             CceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCC
Confidence            89999999985  467777777653  687 7888 77778999999999999999999999999999999999999999


Q ss_pred             CCCceecccCCC---------ceeEeeCCCCHHHHHHHHHHhh---hCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009759          425 GIPDIIPEDQDG---------KIGYLFNPGDLDDCLSKLEPLL---YNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       425 g~~e~v~~~~~~---------~~g~~~~~~d~~~la~ai~~ll---~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly  492 (526)
                      |..|++   .++         .+|++++++|+++++++|.+++   +|++.++++++++++  ++|||+.++++++ ++|
T Consensus       399 g~~e~v---~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~-~~y  472 (485)
T 1rzu_A          399 GLADTV---IDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYA-ALY  472 (485)
T ss_dssp             HHHHHC---CBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHH-HHH
T ss_pred             Chhhee---cccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHH-HHH
Confidence            999999   777         8999999999999999999999   799999999998864  6899999999997 899


Q ss_pred             HHHHHH
Q 009759          493 NAAIWF  498 (526)
Q Consensus       493 ~~~l~~  498 (526)
                      ++++..
T Consensus       473 ~~~~~~  478 (485)
T 1rzu_A          473 SQLISK  478 (485)
T ss_dssp             HHHTC-
T ss_pred             HHhhCC
Confidence            988654

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=100.00  E-value=1.2e-41  Score=346.24  Aligned_cols=349  Identities=17%  Similarity=0.190  Sum_probs=265.8

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceecccccc-CCCccccccchhcccHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSF-PCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~  197 (526)
                      |||++++..+  +..||.+.++..++++|+++ |+|++++.................... ......   ........+.
T Consensus         1 MkI~~v~~~~--p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~   74 (413)
T 3oy2_A            1 MKLIIVGAHS--SVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLN---EQGFYYSGLS   74 (413)
T ss_dssp             CEEEEEEECT--TCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSCSSSEEEEHHHHHHHTTCC---STTCCHHHHH
T ss_pred             CeEEEecCCC--CCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccccccccCCccccccccccc---cccchHHHHH
Confidence            8999998753  45699999999999999999 999999976542211111110000000 000111   0012234667


Q ss_pred             HHHHhcCCCEEEECCCchHHHHHHHHHHhcCCC----EEEEEecCCcccccccccccccchHHHHHHHHhhcCc--EEEe
Q 009759          198 SEVARFKPDIIHASSPGIMVFGALIIAKLLCVP----IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD--LTLV  271 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p----~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~ii~  271 (526)
                      +.+++.+||+||++.+..  ..+..+.+..++|    ++...|.........             .+.+++.+|  .+++
T Consensus        75 ~~l~~~~~Div~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ii~  139 (413)
T 3oy2_A           75 EFIDVHKPDIVMIYNDPI--VIGNYLLAMGKCSHRTKIVLYVDLVSKNIREN-------------LWWIFSHPKVVGVMA  139 (413)
T ss_dssp             HHHHHHCCSEEEEEECHH--HHHHHHHHGGGCCSCCEEEEEECCCSBSCCGG-------------GGGGGGCTTEEEEEE
T ss_pred             HHHHhcCCCEEEEcchHH--HHHHHHHHhccCCCCCceeeeccccchhhHHH-------------HHHHHhccCCceEEE
Confidence            788889999999995433  2234444555544    455555433221100             355778888  9999


Q ss_pred             CChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCC--CCcEEEEEecccccccHHHHHHHHHhC-
Q 009759          272 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP--DKPLIVHVGRLGVEKSLDFLKRVMDRL-  348 (526)
Q Consensus       272 ~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~vG~l~~~Kg~~~li~a~~~l-  348 (526)
                      +|+..++.+.+.+.  ..++.++|||+|.+.+      ...+.+++. ..  +.++|+|+|++.+.||++.+++|++.+ 
T Consensus       140 ~S~~~~~~~~~~~~--~~~~~vi~ngvd~~~~------~~~~~~~~~-~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~  210 (413)
T 3oy2_A          140 MSKCWISDICNYGC--KVPINIVSHFVDTKTI------YDARKLVGL-SEYNDDVLFLNMNRNTARKRLDIYVLAAARFI  210 (413)
T ss_dssp             SSTHHHHHHHHTTC--CSCEEECCCCCCCCCC------TTHHHHTTC-GGGTTSEEEECCSCSSGGGTHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHcCC--CCceEEeCCCCCHHHH------HHHHHhcCC-CcccCceEEEEcCCCchhcCcHHHHHHHHHHH
Confidence            99999999999553  5799999999999877      223334433 23  678999999999999999999999887 


Q ss_pred             ---CCcEEEEEeCCccH------HHHHHHhcCC----C-------eEEecccChhhHHHHHHcCcEEEecCCCCCCcHHH
Q 009759          349 ---PEARIAFIGDGPYR------EELEKMFTGM----P-------AVFTGMLLGEELSQAYASGDVFVMPSESETLGLVV  408 (526)
Q Consensus       349 ---~~~~l~ivG~g~~~------~~l~~l~~~~----~-------V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~i  408 (526)
                         ++++|+|+|+|+..      +.+++++++.    +       |.+.|+++++++.++|++||++|+||..|++|+++
T Consensus       211 ~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~  290 (413)
T 3oy2_A          211 SKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCS  290 (413)
T ss_dssp             HHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHH
T ss_pred             HhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHH
Confidence               89999999988654      7777765543    2       78889999999999999999999999999999999


Q ss_pred             HHHHHcCCcEEEeCCCCCCceecccCCCce---------------eE--eeCCCCHHHHHHHHHHhhhCHHHHHHHHHHH
Q 009759          409 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKI---------------GY--LFNPGDLDDCLSKLEPLLYNQELRETMGQAA  471 (526)
Q Consensus       409 lEAma~G~PvI~~~~gg~~e~v~~~~~~~~---------------g~--~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a  471 (526)
                      +|||++|+|||+++.||..|++   .++.+               |+  +++++|+++++++| ++++|++.++++++++
T Consensus       291 lEAma~G~PvI~s~~~g~~e~v---~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~~~~~~a  366 (413)
T 3oy2_A          291 AEGAVLGKPLIISAVGGADDYF---SGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYGKRV  366 (413)
T ss_dssp             HHHHTTTCCEEEECCHHHHHHS---CTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHHHHH
T ss_pred             HHHHHcCCCEEEcCCCChHHHH---ccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence            9999999999999999999999   77776               88  99999999999999 9999999999999999


Q ss_pred             HHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHh
Q 009759          472 RQEM-EKYDWRAATRTIRNEQYNAAIWFWRKK  502 (526)
Q Consensus       472 ~~~~-~~fs~~~~~~~~~~~ly~~~l~~~~~~  502 (526)
                      ++.+ ++|+|+.++++++ ++|++++++...+
T Consensus       367 ~~~~~~~fs~~~~~~~~~-~~~~~~~~~~~~~  397 (413)
T 3oy2_A          367 QDFVKTKPTWDDISSDII-DFFNSLLRVESRE  397 (413)
T ss_dssp             HHHHTTSCCHHHHHHHHH-HHHHHHTC-----
T ss_pred             HHHHHHhCCHHHHHHHHH-HHHHHHHhhcCCC
Confidence            9999 5899999999997 8999998765433

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=100.00  E-value=1.4e-41  Score=336.78  Aligned_cols=310  Identities=19%  Similarity=0.184  Sum_probs=257.4

Q ss_pred             CcEEEEEecc-----------CCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccc
Q 009759          118 PRRIALFVEP-----------SPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKV  186 (526)
Q Consensus       118 ~mkIliv~~~-----------~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (526)
                      +|||++++..           +|....||.+.++..++++|.++||+|++++....... ..+..+     +...     
T Consensus         3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-~~~~~~-----~~~~-----   71 (342)
T 2iuy_A            3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-RPGLTV-----VPAG-----   71 (342)
T ss_dssp             CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC-STTEEE-----CSCC-----
T ss_pred             ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC-CCccee-----ccCC-----
Confidence            4999999886           23234699999999999999999999999997654322 111111     1111     


Q ss_pred             cchhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcC
Q 009759          187 PLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAA  266 (526)
Q Consensus       187 ~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  266 (526)
                           ....+.+++++.+||+||+|.+.....    .++..++| |+++|+......                     .+
T Consensus        72 -----~~~~l~~~l~~~~~Dvi~~~~~~~~~~----~~~~~~~p-v~~~h~~~~~~~---------------------~~  120 (342)
T 2iuy_A           72 -----EPEEIERWLRTADVDVVHDHSGGVIGP----AGLPPGTA-FISSHHFTTRPV---------------------NP  120 (342)
T ss_dssp             -----SHHHHHHHHHHCCCSEEEECSSSSSCS----TTCCTTCE-EEEEECSSSBCS---------------------CC
T ss_pred             -----cHHHHHHHHHhcCCCEEEECCchhhHH----HHhhcCCC-EEEecCCCCCcc---------------------cc
Confidence                 123778888999999999998653322    25667899 999999764311                     19


Q ss_pred             cEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHH
Q 009759          267 DLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD  346 (526)
Q Consensus       267 d~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~  346 (526)
                      |.++++|+..++.+.+     ..++.+|+||+|.+.+.+...          ...++++|+|+|++.+.||++.++++++
T Consensus       121 d~ii~~S~~~~~~~~~-----~~~~~vi~ngvd~~~~~~~~~----------~~~~~~~i~~vG~~~~~Kg~~~li~a~~  185 (342)
T 2iuy_A          121 VGCTYSSRAQRAHCGG-----GDDAPVIPIPVDPARYRSAAD----------QVAKEDFLLFMGRVSPHKGALEAAAFAH  185 (342)
T ss_dssp             TTEEESCHHHHHHTTC-----CTTSCBCCCCBCGGGSCCSTT----------CCCCCSCEEEESCCCGGGTHHHHHHHHH
T ss_pred             eEEEEcCHHHHHHHhc-----CCceEEEcCCCChhhcCcccc----------cCCCCCEEEEEeccccccCHHHHHHHHH
Confidence            9999999999998865     368999999999988766532          1235678999999999999999999999


Q ss_pred             hCCCcEEEEEeCCccHHHHHHHhcC--CCeEEecccChhhHHHHHHcCcEEEecCC----------CCCCcHHHHHHHHc
Q 009759          347 RLPEARIAFIGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSE----------SETLGLVVLEAMSS  414 (526)
Q Consensus       347 ~l~~~~l~ivG~g~~~~~l~~l~~~--~~V~~~g~v~~~~l~~~~~~aDv~v~ps~----------~e~~~~~ilEAma~  414 (526)
                      .+ +++|+|+|+|+..+.+++++++  .+|+++|+++++++.++|+.||++|+||.          .|++|++++|||++
T Consensus       186 ~~-~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~  264 (342)
T 2iuy_A          186 AC-GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVS  264 (342)
T ss_dssp             HH-TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHT
T ss_pred             hc-CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhc
Confidence            98 9999999999888888877654  58999999999999999999999999999          89999999999999


Q ss_pred             CCcEEEeCCCCCCceecccCC--CceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHH
Q 009759          415 GIPVVGVRAGGIPDIIPEDQD--GKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRNEQ  491 (526)
Q Consensus       415 G~PvI~~~~gg~~e~v~~~~~--~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~~l  491 (526)
                      |+|||+++.||..|++   ++  +.+|+++++ |+++++++|.++++        ++++++.+ ++|+|+.+++++. ++
T Consensus       265 G~PvI~s~~~~~~e~~---~~~~~~~g~~~~~-d~~~l~~~i~~l~~--------~~~~~~~~~~~~s~~~~~~~~~-~~  331 (342)
T 2iuy_A          265 GTPVVGTGNGCLAEIV---PSVGEVVGYGTDF-APDEARRTLAGLPA--------SDEVRRAAVRLWGHVTIAERYV-EQ  331 (342)
T ss_dssp             TCCEEECCTTTHHHHG---GGGEEECCSSSCC-CHHHHHHHHHTSCC--------HHHHHHHHHHHHBHHHHHHHHH-HH
T ss_pred             CCCEEEcCCCChHHHh---cccCCCceEEcCC-CHHHHHHHHHHHHH--------HHHHHHHHHHhcCHHHHHHHHH-HH
Confidence            9999999999999999   88  889999999 99999999999987        66788888 6899999999997 89


Q ss_pred             HHHHHHH
Q 009759          492 YNAAIWF  498 (526)
Q Consensus       492 y~~~l~~  498 (526)
                      |++++++
T Consensus       332 ~~~~~~~  338 (342)
T 2iuy_A          332 YRRLLAG  338 (342)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHcc
Confidence            9998753

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=100.00  E-value=3.9e-40  Score=352.99  Aligned_cols=375  Identities=17%  Similarity=0.218  Sum_probs=271.7

Q ss_pred             CCCcEEEEEeccCCC---------CccCchHHHHHH--------HHHHHHHCCCeEE----EEEeCCCCC---------c
Q 009759          116 SRPRRIALFVEPSPF---------SYVSGYKNRFQN--------FIKYLREMGDEVM----VVTTHEGVP---------Q  165 (526)
Q Consensus       116 ~~~mkIliv~~~~p~---------~~~gG~~~~~~~--------l~~~L~~~G~~V~----vi~~~~~~~---------~  165 (526)
                      .+.|+|++++.+. +         ++.||...++.+        |++.|+++||+|+    |+|......         +
T Consensus       276 ~~~~~i~~is~hg-~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e  354 (816)
T 3s28_A          276 PMVFNVVILSPHG-YFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLE  354 (816)
T ss_dssp             CCCCEEEEECCSS-CCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEE
T ss_pred             CceeEEEEEcCCc-ccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcce
Confidence            4568999997753 3         788998888884        6677788999886    887653221         1


Q ss_pred             cc---cCceeccccccCCC-----ccccc--cc-hhccc-HHHHHHHHh--cCCCEEEECCCchHHHHHHHHHHhcCCCE
Q 009759          166 EF---YGAKLIGSRSFPCP-----WYQKV--PL-SLALS-PRIISEVAR--FKPDIIHASSPGIMVFGALIIAKLLCVPI  231 (526)
Q Consensus       166 ~~---~~~~~~~~~~~~~~-----~~~~~--~~-~~~~~-~~l~~~l~~--~~pDiV~~~~~~~~~~~~~~~~~~~~~p~  231 (526)
                      ..   .+..+++++..+..     +..+.  .. ...+. ..+..+++.  .+|||||+|.+. ..+.+.++++..++|+
T Consensus       355 ~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~-sglva~llar~~gvP~  433 (816)
T 3s28_A          355 RVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSD-GNLVASLLAHKLGVTQ  433 (816)
T ss_dssp             ECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHH-HHHHHHHHHHHHTCCE
T ss_pred             eecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCch-HHHHHHHHHHHcCCCE
Confidence            11   13334433332211     01110  11 11111 223334433  379999999753 3455677788899999


Q ss_pred             EEEEecCCccccccccccc--ccc-----hHHHHHHHHhhcCcEEEeCChhHHHHHHHh---cc----------------
Q 009759          232 VMSYHTHVPVYIPRYTFSW--LVK-----PMWLVIKFLHRAADLTLVPSVAIGKDLEAA---RV----------------  285 (526)
Q Consensus       232 v~~~h~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~---~~----------------  285 (526)
                      |++.|+............+  ...     .....++.+++.+|.|+++|+..++.+.+.   +.                
T Consensus       434 V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~g  513 (816)
T 3s28_A          434 CTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHG  513 (816)
T ss_dssp             EEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEES
T ss_pred             EEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccc
Confidence            9999986533222111100  000     011236678999999999999988853221   10                


Q ss_pred             --cCCCcEEEeecCCCCCCCCCCcccHH------------------HHHhhcC-CCCCCcEEEEEecccccccHHHHHHH
Q 009759          286 --TAANKIRIWKKGVDSESFHPRFRSSE------------------MRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRV  344 (526)
Q Consensus       286 --~~~~ki~vi~ngid~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~i~~vG~l~~~Kg~~~li~a  344 (526)
                        ....++.+||||+|.+.|.|......                  .+..++. ...++++|+|+||+.+.||++.+++|
T Consensus       514 I~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA  593 (816)
T 3s28_A          514 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEW  593 (816)
T ss_dssp             CCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHH
T ss_pred             cccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHH
Confidence              11239999999999999977643221                  0111111 24578899999999999999999999


Q ss_pred             HHhC----CCcEEEEEeCCc-----------cHHHHHHHhcCC----CeEEeccc----ChhhHHHHHH-cCcEEEecCC
Q 009759          345 MDRL----PEARIAFIGDGP-----------YREELEKMFTGM----PAVFTGML----LGEELSQAYA-SGDVFVMPSE  400 (526)
Q Consensus       345 ~~~l----~~~~l~ivG~g~-----------~~~~l~~l~~~~----~V~~~g~v----~~~~l~~~~~-~aDv~v~ps~  400 (526)
                      ++.+    ++++|+|+|+|+           ..+.+++++++.    +|.|+|++    +.+++..+|+ ++|++|+||.
T Consensus       594 ~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~  673 (816)
T 3s28_A          594 YGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPAL  673 (816)
T ss_dssp             HHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred             HHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCC
Confidence            9988    469999999988           556677766643    69999954    4588999998 6799999999


Q ss_pred             CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhh----hCHHHHHHHHHHHHHHH-
Q 009759          401 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL----YNQELRETMGQAARQEM-  475 (526)
Q Consensus       401 ~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll----~d~~~~~~~~~~a~~~~-  475 (526)
                      +|+||++++||||||+|||+++.||..|++   .++.+|++++++|+++++++|.+++    .|++.++++++++++.+ 
T Consensus       674 ~EgfglvllEAMA~G~PVIasd~GG~~EiV---~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~  750 (816)
T 3s28_A          674 YEAFGLTVVEAMTCGLPTFATCKGGPAEII---VHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIE  750 (816)
T ss_dssp             CBSSCHHHHHHHHTTCCEEEESSBTHHHHC---CBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHH
T ss_pred             ccCccHHHHHHHHcCCCEEEeCCCChHHHH---ccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999   8999999999999999999997776    89999999999999999 


Q ss_pred             HhCCHHHHHHHHHHHHHHHHH
Q 009759          476 EKYDWRAATRTIRNEQYNAAI  496 (526)
Q Consensus       476 ~~fs~~~~~~~~~~~ly~~~l  496 (526)
                      ++|||+.++++++ ++|+..-
T Consensus       751 ~~fSwe~~a~~ll-~lY~~~g  770 (816)
T 3s28_A          751 EKYTWQIYSQRLL-TLTGVYG  770 (816)
T ss_dssp             HSCCHHHHHHHHH-HHHHHHH
T ss_pred             HhCCHHHHHHHHH-HHHHHHh
Confidence            6899999999998 8998763

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=100.00  E-value=1.5e-40  Score=338.56  Aligned_cols=352  Identities=19%  Similarity=0.219  Sum_probs=257.8

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc--ccCce--eccccccCCCccccccchhc
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE--FYGAK--LIGSRSFPCPWYQKVPLSLA  191 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~  191 (526)
                      .++|||++++..   +..||.+.++.+++++|.+.||+|++++........  .....  ..+...+.... ........
T Consensus        38 ~~~mkIl~v~~~---~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  113 (416)
T 2x6q_A           38 LKGRSFVHVNST---SFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLTE-EMKELYLN  113 (416)
T ss_dssp             TTTCEEEEEESC---SSSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHHHHHHHHTTCCSCCCCH-HHHHHHHH
T ss_pred             hhccEEEEEeCC---CCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhhhhcccceeecccccccccH-HHHHHHHH
Confidence            356999999874   467999999999999999999999999875431100  00000  00000111110 00001111


Q ss_pred             ccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEE-
Q 009759          192 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL-  270 (526)
Q Consensus       192 ~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii-  270 (526)
                      +...+.+.+++.+||+||+|++....+..+ + . .++|+|++.|+.....         ....+...+.++..+|.++ 
T Consensus       114 ~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~-~-~-~~~p~v~~~h~~~~~~---------~~~~~~~~~~~~~~~~~~i~  181 (416)
T 2x6q_A          114 VNRENSKFIDLSSFDYVLVHDPQPAALIEF-Y-E-KKSPWLWRCHIDLSSP---------NREFWEFLRRFVEKYDRYIF  181 (416)
T ss_dssp             HHHHHHHSSCGGGSSEEEEESSTTGGGGGG-S-C-CCSCEEEECCSCCSSC---------CHHHHHHHHHHHTTSSEEEE
T ss_pred             HHHHHHHHHhhcCCCEEEEeccchhhHHHH-H-H-hcCCEEEEEccccCCc---------cHHHHHHHHHHHHhCCEEEE
Confidence            223445556677999999998754433221 1 2 2389999999865431         1122233444566677665 


Q ss_pred             eCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCc----ccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHH
Q 009759          271 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRF----RSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD  346 (526)
Q Consensus       271 ~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~  346 (526)
                      ++|+..++.      .+..++.+||||+|...+.+..    .....+.+++. .++.++|+|+|++.+.||++.++++++
T Consensus       182 ~~s~~~~~~------~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~i~~vGrl~~~Kg~~~li~a~~  254 (416)
T 2x6q_A          182 HLPEYVQPE------LDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDV-DPEKPIITQVSRFDPWKGIFDVIEIYR  254 (416)
T ss_dssp             SSGGGSCTT------SCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTC-CTTSCEEEEECCCCTTSCHHHHHHHHH
T ss_pred             echHHHHhh------CCccceEEeCCCCChhhhcccccChhhHHHHHHHhCC-CCCCcEEEEEeccccccCHHHHHHHHH
Confidence            666655432      1346899999999987665432    12344555544 457789999999999999999999998


Q ss_pred             hC----CCcEEEEEeCCcc-----HHHHHHHhc----CCCeEEecccC---hhhHHHHHHcCcEEEecCCCCCCcHHHHH
Q 009759          347 RL----PEARIAFIGDGPY-----REELEKMFT----GMPAVFTGMLL---GEELSQAYASGDVFVMPSESETLGLVVLE  410 (526)
Q Consensus       347 ~l----~~~~l~ivG~g~~-----~~~l~~l~~----~~~V~~~g~v~---~~~l~~~~~~aDv~v~ps~~e~~~~~ilE  410 (526)
                      .+    ++++|+|+|+|+.     .+.++++++    ..+|+++|+++   ++++.++|+.||++|+||..||+|++++|
T Consensus       255 ~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lE  334 (416)
T 2x6q_A          255 KVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTE  334 (416)
T ss_dssp             HHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHH
T ss_pred             HHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHH
Confidence            76    6899999999863     344444443    34799999775   57999999999999999999999999999


Q ss_pred             HHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Q 009759          411 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-EKYDWRAATRTIRN  489 (526)
Q Consensus       411 Ama~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~~fs~~~~~~~~~~  489 (526)
                      ||++|+|||+++.||..|++   .++.+|++++  |+++++++|.++++|++.++++++++++.+ ++|+|+.+++++. 
T Consensus       335 Ama~G~PvI~~~~~g~~e~i---~~~~~g~l~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~-  408 (416)
T 2x6q_A          335 AMWKGKPVIGRAVGGIKFQI---VDGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYL-  408 (416)
T ss_dssp             HHHTTCCEEEESCHHHHHHC---CBTTTEEEES--SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHHHH-
T ss_pred             HHHcCCCEEEccCCCChhhe---ecCCCeEEEC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHH-
Confidence            99999999999999999999   8889999998  999999999999999999999999999998 4899999999997 


Q ss_pred             HHHHHHH
Q 009759          490 EQYNAAI  496 (526)
Q Consensus       490 ~ly~~~l  496 (526)
                      ++|++++
T Consensus       409 ~~~~~l~  415 (416)
T 2x6q_A          409 DILNSLG  415 (416)
T ss_dssp             HHHHTC-
T ss_pred             HHHHHhh
Confidence            8998765

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=100.00  E-value=1.8e-41  Score=340.02  Aligned_cols=357  Identities=15%  Similarity=0.130  Sum_probs=264.4

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      |||++++..++ + .||.+.++.+++++|+++||+|++++....... ..+..+..   ++............+...+.+
T Consensus         1 MkIl~i~~~~~-~-~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-~~~~~v~~---~~~~~~~~~~~~~~~~~~l~~   74 (374)
T 2iw1_A            1 MIVAFCLYKYF-P-FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC-PKAFELIQ---VPVKSHTNHGRNAEYYAWVQN   74 (374)
T ss_dssp             -CEEEECSEEC-T-TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC-CTTCEEEE---CCCCCSSHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeecC-C-CcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC-CCCcEEEE---EccCcccchhhHHHHHHHHHH
Confidence            89999987643 2 599999999999999999999999997532211 12333222   222212112222334557788


Q ss_pred             HHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhh--cCcEEEeCChhH
Q 009759          199 EVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHR--AADLTLVPSVAI  276 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ad~ii~~S~~~  276 (526)
                      .+++.+||+||++....... ........+++.+.+.|+....      ..........+++..+.  .+|.++++|+..
T Consensus        75 ~i~~~~~Dvv~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~  147 (374)
T 2iw1_A           75 HLKEHPADRVVGFNKMPGLD-VYFAADVCYAEKVAQEKGFLYR------LTSRYRHYAAFERATFEQGKSTKLMMLTDKQ  147 (374)
T ss_dssp             HHHHSCCSEEEESSCCTTCS-EEECCSCCHHHHHHHHCCHHHH------TSHHHHHHHHHHHHHHSTTCCCEEEESCHHH
T ss_pred             HHhccCCCEEEEecCCCCce-eeeccccccceeeeecccchhh------hcHHHHHHHHHHHHHhhccCCcEEEEcCHHH
Confidence            88899999999987432110 0000111111222222221110      00011122344555554  699999999999


Q ss_pred             HHHHHHhcccCCCcEEEeecCCCCCCCCCCcc---cHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC-----
Q 009759          277 GKDLEAARVTAANKIRIWKKGVDSESFHPRFR---SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-----  348 (526)
Q Consensus       277 ~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l-----  348 (526)
                      ++.+.+.++.+..++.++|||+|.+.+.+...   ....+.+++. .+++++++|+|++.+.||++.++++++.+     
T Consensus       148 ~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~  226 (374)
T 2iw1_A          148 IADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGI-KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLR  226 (374)
T ss_dssp             HHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTC-CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHH
T ss_pred             HHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCC-CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccC
Confidence            99999876666789999999999988765432   2345566654 45678999999999999999999999988     


Q ss_pred             CCcEEEEEeCCccHHHHHHHhcC----CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          349 PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       349 ~~~~l~ivG~g~~~~~l~~l~~~----~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      ++++|+++|+|+. +.+++++++    .+|+++|+.  +++.++|+.||++|+||..|++|++++|||++|+|||+++.|
T Consensus       227 ~~~~l~i~G~g~~-~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~  303 (374)
T 2iw1_A          227 HNTLLFVVGQDKP-RKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVC  303 (374)
T ss_dssp             HTEEEEEESSSCC-HHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTS
T ss_pred             CceEEEEEcCCCH-HHHHHHHHHcCCCCcEEECCCc--ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCC
Confidence            3689999999874 556666553    379999985  789999999999999999999999999999999999999999


Q ss_pred             CCCceecccCCCceeEeeC-CCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 009759          425 GIPDIIPEDQDGKIGYLFN-PGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  496 (526)
Q Consensus       425 g~~e~v~~~~~~~~g~~~~-~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l  496 (526)
                      |..+++   .++.+|++++ ++|+++++++|.++++|++.++++++++++.+++|+|+..++++. ++++..+
T Consensus       304 ~~~e~i---~~~~~g~~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l  372 (374)
T 2iw1_A          304 GYAHYI---ADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAA-DIITGGL  372 (374)
T ss_dssp             TTTHHH---HHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHH-HHHHCC-
T ss_pred             Cchhhh---ccCCceEEeCCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhhHHHHHHHHH-HHHHHhh
Confidence            999999   7889999997 889999999999999999999999999999999899999999986 6766543

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=100.00  E-value=1.3e-37  Score=314.53  Aligned_cols=348  Identities=10%  Similarity=0.026  Sum_probs=235.6

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccC---CCccccc-cchh
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFP---CPWYQKV-PLSL  190 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~  190 (526)
                      ..++|||++++..++.....|+..++.+++++|+++||+|+|++.......  ..  ...+..++   ....... ....
T Consensus        43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~i~  118 (413)
T 2x0d_A           43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPNP--KD--LQSFKSFKYVMPEEDKDFALQIV  118 (413)
T ss_dssp             CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSCCCCH--HH--HGGGTTSEECCTTCCCCCSEEEE
T ss_pred             CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecCCCCh--HH--HHhhhccceeeccCCccccceee
Confidence            456799999998765222345556799999999999999999998643211  00  01111110   0000000 0000


Q ss_pred             cccHHHHHHHHhcCCCEEEECCCchHHHHHHHHH----H---hcCCCEEEEEecCCcccccccccccccchHHHHHHHHh
Q 009759          191 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIA----K---LLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLH  263 (526)
Q Consensus       191 ~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~----~---~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (526)
                      .+...+...+...++|+||++.+..... +..+.    .   ..+.+.++.+|+..+......       ..+.+.+..+
T Consensus       119 ~~~~~~~~~~~~~~~Dvv~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~~~  190 (413)
T 2x0d_A          119 PFNDRYNRTIPVAKHDIFIATAWWTAYA-AQRIVSWQSDTYGIPPNKILYIIQDFEPGFYQWS-------SQYVLAESTY  190 (413)
T ss_dssp             ECSCCTTCCEEECTTEEEEECSHHHHHH-HHHHHHHHHHHHTCCCCCEEEEECSCGGGGSCSS-------HHHHHHHHTT
T ss_pred             eccccccccccCCCCCEEEEehHHHHHH-HHHhhhhhhhhcccccCcEEEEEeechhhcCccC-------hHHHHHHHHh
Confidence            0000011111224799999997532222 11111    1   135688888888765432211       1223455666


Q ss_pred             hcCc--EEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecc-cccccHHH
Q 009759          264 RAAD--LTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRL-GVEKSLDF  340 (526)
Q Consensus       264 ~~ad--~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l-~~~Kg~~~  340 (526)
                      ..++  .++++|+.+++.+.+.+. +..++.+++||+|.+.+.+...          ...+...++++||+ .+.||++.
T Consensus       191 ~~~~~~~vi~~S~~~~~~l~~~g~-~~~~~~~i~~g~d~~~~~~~~~----------~~~~~~~il~~gr~~~~~Kg~~~  259 (413)
T 2x0d_A          191 KYRGPQIAVFNSELLKQYFNNKGY-NFTDEYFFQPKINTTLKNYIND----------KRQKEKIILVYGRPSVKRNAFTL  259 (413)
T ss_dssp             SCCSCEEEEEESHHHHHHHHHHTC-CCSEEEEECCCCCHHHHTTTTS----------CCCCCSEEEEEECTTCGGGCHHH
T ss_pred             ccCCceEEEEcCHHHHHHHHHcCC-CCCceEEeCCCcCchhhccccc----------ccCCCCEEEEEecCchhccCHHH
Confidence            6665  589999999999988743 4457899999998764432100          23456678999997 68899999


Q ss_pred             HHHHHHhC----CC---cEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHH
Q 009759          341 LKRVMDRL----PE---ARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMS  413 (526)
Q Consensus       341 li~a~~~l----~~---~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma  413 (526)
                      +++|++.+    |+   ++|+++|+|+...   ++....+|+|+|+++.+++.++|+.||++|+||..|++|++++||||
T Consensus       260 li~A~~~l~~~~~~~~~~~l~ivG~~~~~~---~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA  336 (413)
T 2x0d_A          260 IVEALKIFVQKYDRSNEWKIISVGEKHKDI---ALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAH  336 (413)
T ss_dssp             HHHHHHHHHHHCTTGGGCEEEEEESCCCCE---EEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCceEEEEEcCCchhh---hcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHh
Confidence            99999876    44   8999999886542   11122379999999999999999999999999999999999999999


Q ss_pred             cCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 009759          414 SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       414 ~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~  493 (526)
                      ||+|||++ .+|..|++   +++.+|++++++|+++++++|.++++|++.+++   ++++.+++|+|++..+++  ++|+
T Consensus       337 ~G~PVV~~-~~g~~e~v---~~~~~G~lv~~~d~~~la~ai~~ll~~~~~~~~---~~~~~~~~~~W~~~~~~~--~~~~  407 (413)
T 2x0d_A          337 FGLRVITN-KYENKDLS---NWHSNIVSLEQLNPENIAETLVELCMSFNNRDV---DKKESSNMMFYINEFNEF--SFIK  407 (413)
T ss_dssp             TTCEEEEE-CBTTBCGG---GTBTTEEEESSCSHHHHHHHHHHHHHHTC----------CCBSCGGGCCCC-----TTHH
T ss_pred             CCCcEEEe-CCCcchhh---hcCCCEEEeCCCCHHHHHHHHHHHHcCHHHHHH---hHHHHHHhCCHHHHHHHH--HHHH
Confidence            99999995 45678999   888999999999999999999999998887776   566666789999999885  6888


Q ss_pred             HHHH
Q 009759          494 AAIW  497 (526)
Q Consensus       494 ~~l~  497 (526)
                      ++++
T Consensus       408 ~l~~  411 (413)
T 2x0d_A          408 EIEE  411 (413)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            8754

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=100.00  E-value=5.4e-34  Score=284.67  Aligned_cols=327  Identities=16%  Similarity=0.139  Sum_probs=240.4

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc-c--cCceeccccccCCCccc------cccc
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE-F--YGAKLIGSRSFPCPWYQ------KVPL  188 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~-~--~~~~~~~~~~~~~~~~~------~~~~  188 (526)
                      +|||++++.     ..||...++..++++|.++||+|++++........ .  .+.....+.........      ....
T Consensus         6 ~mkIl~~~~-----~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   80 (364)
T 1f0k_A            6 GKRLMVMAG-----GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLR   80 (364)
T ss_dssp             -CEEEEECC-----SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHH
T ss_pred             CcEEEEEeC-----CCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHH
Confidence            489999963     23788888999999999999999999976532211 1  12222222111111000      0011


Q ss_pred             hhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcE
Q 009759          189 SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADL  268 (526)
Q Consensus       189 ~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  268 (526)
                      .......+.+.+++.+||+||++..... +.+..+++..++|+|++.|+.++.               ...+.+.+.+|.
T Consensus        81 ~~~~~~~l~~~l~~~~pDvv~~~~~~~~-~~~~~~~~~~~~p~v~~~~~~~~~---------------~~~~~~~~~~d~  144 (364)
T 1f0k_A           81 IFNAWRQARAIMKAYKPDVVLGMGGYVS-GPGGLAAWSLGIPVVLHEQNGIAG---------------LTNKWLAKIATK  144 (364)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEECSSTTH-HHHHHHHHHTTCCEEEEECSSSCC---------------HHHHHHTTTCSE
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEeCCcCc-hHHHHHHHHcCCCEEEEecCCCCc---------------HHHHHHHHhCCE
Confidence            1223456778888899999999975433 334556777899999999885421               124567788999


Q ss_pred             EEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCc-EEEEEecccccccHHHHHHHHHh
Q 009759          269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKP-LIVHVGRLGVEKSLDFLKRVMDR  347 (526)
Q Consensus       269 ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~vG~l~~~Kg~~~li~a~~~  347 (526)
                      +++.++..       +  +  ++.+++||++.+.+.+..    .+..++. ..+.+ ++++.|++.+.|+.+.++++++.
T Consensus       145 v~~~~~~~-------~--~--~~~~i~n~v~~~~~~~~~----~~~~~~~-~~~~~~il~~~g~~~~~k~~~~li~a~~~  208 (364)
T 1f0k_A          145 VMQAFPGA-------F--P--NAEVVGNPVRTDVLALPL----PQQRLAG-REGPVRVLVVGGSQGARILNQTMPQVAAK  208 (364)
T ss_dssp             EEESSTTS-------S--S--SCEECCCCCCHHHHTSCC----HHHHHTT-CCSSEEEEEECTTTCCHHHHHHHHHHHHH
T ss_pred             EEecChhh-------c--C--CceEeCCccchhhcccch----hhhhccc-CCCCcEEEEEcCchHhHHHHHHHHHHHHH
Confidence            99988764       1  2  678999999887654421    1233333 23444 45566799999999999999998


Q ss_pred             CC-CcE-EEEEeCCccHHHHHHHhcC---CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeC
Q 009759          348 LP-EAR-IAFIGDGPYREELEKMFTG---MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       348 l~-~~~-l~ivG~g~~~~~l~~l~~~---~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~  422 (526)
                      +. +++ ++++|+|+ .+.+++++++   .+|++.|++  +++..+|+.||++|+||.    |++++|||++|+|||+++
T Consensus       209 l~~~~~~l~i~G~~~-~~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~  281 (364)
T 1f0k_A          209 LGDSVTIWHQSGKGS-QQSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVP  281 (364)
T ss_dssp             HGGGEEEEEECCTTC-HHHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECC
T ss_pred             hcCCcEEEEEcCCch-HHHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEee
Confidence            85 678 56788887 4666665543   279999999  799999999999999983    999999999999999999


Q ss_pred             CCCCC--------ceecccCCCceeEeeCCCC--HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009759          423 AGGIP--------DIIPEDQDGKIGYLFNPGD--LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       423 ~gg~~--------e~v~~~~~~~~g~~~~~~d--~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly  492 (526)
                      .+|..        +++   +++ .|++++++|  +++++++|.++  |++.++++++++++.+++|+|+.++++++ ++|
T Consensus       282 ~~g~~~~q~~~~~~~~---~~g-~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~y  354 (364)
T 1f0k_A          282 FQHKDRQQYWNALPLE---KAG-AAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANEVS-RVA  354 (364)
T ss_dssp             CCCTTCHHHHHHHHHH---HTT-SEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHHHHHHHH-HHH
T ss_pred             CCCCchhHHHHHHHHH---hCC-cEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhhccCHHHHHHHHHH-HHH
Confidence            99864        355   444 499999888  99999999999  99999999999998888999999999997 888


Q ss_pred             HHH
Q 009759          493 NAA  495 (526)
Q Consensus       493 ~~~  495 (526)
                      ++.
T Consensus       355 ~~~  357 (364)
T 1f0k_A          355 RAL  357 (364)
T ss_dssp             TTC
T ss_pred             HHH
Confidence            764

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=100.00  E-value=5.5e-35  Score=295.40  Aligned_cols=328  Identities=13%  Similarity=0.096  Sum_probs=226.8

Q ss_pred             CCCCcEEEEEecc-CCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCC------------------ccccCceeccc
Q 009759          115 NSRPRRIALFVEP-SPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVP------------------QEFYGAKLIGS  175 (526)
Q Consensus       115 ~~~~mkIliv~~~-~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~------------------~~~~~~~~~~~  175 (526)
                      ..++|||++++.. +| +..+|..   ..+++.|+++| +|+|++......                  +...++.+...
T Consensus        11 ~~~~MkIl~is~~~~p-~~~~~~~---~~l~~~l~~~G-~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~   85 (406)
T 2hy7_A           11 GIRRPCYLVLSSHDFR-TPRRANI---HFITDQLALRG-TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLW   85 (406)
T ss_dssp             --CCSCEEEEESSCTT-SSSCCHH---HHHHHHHHHHS-CEEEEECSCBTTHHHHTCTTGGGGGGTTSEEEETTEEEEEC
T ss_pred             CCCCceEEEEecccCC-ChhhhhH---hHHHHHHHhCC-ceEEEEecccHHHHhhccchhhhhccCccceecCCeEEEee
Confidence            3456999999987 66 4444443   45677888999 999995432100                  00122222221


Q ss_pred             cccCCCccc--cccc----------hhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccc
Q 009759          176 RSFPCPWYQ--KVPL----------SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI  243 (526)
Q Consensus       176 ~~~~~~~~~--~~~~----------~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~  243 (526)
                      .....+...  ....          .......+.++++  ++|+||........  ...+++..++|+++++|+..... 
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~DvIh~~~~~~~~--~~~~~~~~~~p~v~~~h~~~~~~-  160 (406)
T 2hy7_A           86 RTTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWMR--ESDVIVFESGIAVA--FIELAKRVNPAAKLVYRASDGLS-  160 (406)
T ss_dssp             CBSSCCCCCCCGGGHHHHHHHHHHHHHCCCHHHHHHHH--HCSEEEEESSGGGG--GHHHHHHHCTTSEEEEEESSCHH-
T ss_pred             ccccCCccccchhhhccchhHHHHHHHhHHHHHHHHhc--CCCEEEECCchHHH--HHHHHHHhCCCEEEEEeccchhh-
Confidence            111111100  1000          0112223344444  78999954322111  11345677999999999754210 


Q ss_pred             cccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCC
Q 009759          244 PRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDK  323 (526)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~  323 (526)
                       ..   .........++.+++.+|.++++|+..++.+.+.+     ++.+||||+|.+.|.+....         ..+++
T Consensus       161 -~~---~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~-----~i~vipngvd~~~f~~~~~~---------~~~~~  222 (406)
T 2hy7_A          161 -TI---NVASYIEREFDRVAPTLDVIALVSPAMAAEVVSRD-----NVFHVGHGVDHNLDQLGDPS---------PYAEG  222 (406)
T ss_dssp             -HH---TCCHHHHHHHHHHGGGCSEEEESCGGGGGGCSCST-----TEEECCCCBCTTHHHHHCSC---------SCCSS
T ss_pred             -cc---cccHHHHHHHHHHHHhCCEEEEcCHHHHHHHHhcC-----CEEEEcCCcChHhcCccccc---------ccCCC
Confidence             00   01223456778889999999999999988876543     89999999998866432111         12234


Q ss_pred             cEEEEEecccccccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCC
Q 009759          324 PLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESET  403 (526)
Q Consensus       324 ~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~  403 (526)
                      ++++|+|++.+.||+  +..+.+..++++|+|+|+|+    .+++....+|+|+|+++++++.++|++||++|+||..|+
T Consensus       223 ~~i~~vGrl~~~Kg~--~~~l~~~~~~~~l~ivG~g~----~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~  296 (406)
T 2hy7_A          223 IHAVAVGSMLFDPEF--FVVASKAFPQVTFHVIGSGM----GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQ  296 (406)
T ss_dssp             EEEEEECCTTBCHHH--HHHHHHHCTTEEEEEESCSS----CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSC
T ss_pred             cEEEEEeccccccCH--HHHHHHhCCCeEEEEEeCch----HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCccc
Confidence            789999999999999  44445567899999999987    222222347999999999999999999999999999999


Q ss_pred             CcHHHHHHH-------HcCCcEEEeCCCCCCceecccCCCceeEe-eCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH
Q 009759          404 LGLVVLEAM-------SSGIPVVGVRAGGIPDIIPEDQDGKIGYL-FNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  475 (526)
Q Consensus       404 ~~~~ilEAm-------a~G~PvI~~~~gg~~e~v~~~~~~~~g~~-~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~  475 (526)
                      +|++++|||       |||+|||+++.      +   .++.+|++ ++++|+++++++|.++++|++         ++..
T Consensus       297 ~~~~~lEAm~Kl~eYla~G~PVIas~~------v---~~~~~G~l~v~~~d~~~la~ai~~ll~~~~---------~~~~  358 (406)
T 2hy7_A          297 VPVYLADSSMKLLQYDFFGLPAVCPNA------V---VGPYKSRFGYTPGNADSVIAAITQALEAPR---------VRYR  358 (406)
T ss_dssp             CCTTHHHHCHHHHHHHHHTCCEEEEGG------G---TCSCSSEEEECTTCHHHHHHHHHHHHHCCC---------CCCS
T ss_pred             CchHHHHHHHHHHHHhhCCCcEEEehh------c---ccCcceEEEeCCCCHHHHHHHHHHHHhCcc---------hhhh
Confidence            999999999       99999999987      5   67888999 999999999999999999876         1233


Q ss_pred             HhCCHHHHHHHHHHHH--HHHH
Q 009759          476 EKYDWRAATRTIRNEQ--YNAA  495 (526)
Q Consensus       476 ~~fs~~~~~~~~~~~l--y~~~  495 (526)
                      ++|+|+.++++++ ++  |+++
T Consensus       359 ~~~sw~~~a~~~~-~~~~y~~~  379 (406)
T 2hy7_A          359 QCLNWSDTTDRVL-DPRAYPET  379 (406)
T ss_dssp             CCCBHHHHHHHHH-CGGGSGGG
T ss_pred             hcCCHHHHHHHHH-Hhhccccc
Confidence            6899999999997 67  6654

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=100.00  E-value=5e-33  Score=278.79  Aligned_cols=350  Identities=16%  Similarity=0.143  Sum_probs=241.0

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHC-C-CeEEEEEeCCCCCccccCceeccccc-cCCCcc----cccc
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM-G-DEVMVVTTHEGVPQEFYGAKLIGSRS-FPCPWY----QKVP  187 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G-~~V~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~  187 (526)
                      +.++|||++++...  +.    ......+++.|++. | |+|.+++...+...........++.. +.....    ....
T Consensus         5 m~~~mkIl~v~~~~--~~----~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (375)
T 3beo_A            5 MTERLKVMTIFGTR--PE----AIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLID   78 (375)
T ss_dssp             CSSCEEEEEEECSH--HH----HHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHH
T ss_pred             CCcCceEEEEecCc--HH----HHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCCCcccHHH
Confidence            45569999998542  21    12456788888887 4 88877775443211000000011111 011111    0011


Q ss_pred             chhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCc
Q 009759          188 LSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  267 (526)
Q Consensus       188 ~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  267 (526)
                      ........+.+++++++||+||+|......+.+.++++..++|++++.|+... . ..  ....  ..+...+.+.+.+|
T Consensus        79 ~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~-~-~~--~~~~--~~~~~~~~~~~~~d  152 (375)
T 3beo_A           79 ITTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRT-W-DK--YSPY--PEEMNRQLTGVMAD  152 (375)
T ss_dssp             HHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCC-S-CT--TSST--THHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc-c-cc--cCCC--hhHhhhhHHhhhhh
Confidence            11223456788889999999999876444454556677889999976665421 0 00  0000  11222333456699


Q ss_pred             EEEeCChhHHHHHHHhcccCCCcEEEeecC-CCCCCCCCCc-ccHHHHHhhcCCCCCCcEEEEEeccccc-ccHHHHHHH
Q 009759          268 LTLVPSVAIGKDLEAARVTAANKIRIWKKG-VDSESFHPRF-RSSEMRWRLSNGEPDKPLIVHVGRLGVE-KSLDFLKRV  344 (526)
Q Consensus       268 ~ii~~S~~~~~~l~~~~~~~~~ki~vi~ng-id~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~vG~l~~~-Kg~~~li~a  344 (526)
                      .++++|+..++.+.+.+ .+.+++.+++|| +|...+.+.. .....+.++   .+++.+++++|++.+. ||++.+++|
T Consensus       153 ~ii~~s~~~~~~~~~~g-~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~---~~~~~vl~~~gr~~~~~K~~~~li~a  228 (375)
T 3beo_A          153 LHFSPTAKSATNLQKEN-KDESRIFITGNTAIDALKTTVKETYSHPVLEKL---GNNRLVLMTAHRRENLGEPMRNMFRA  228 (375)
T ss_dssp             EEEESSHHHHHHHHHTT-CCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT---TTSEEEEEECCCGGGTTHHHHHHHHH
T ss_pred             eeeCCCHHHHHHHHHcC-CCcccEEEECChhHhhhhhhhhhhhhHHHHHhc---cCCCeEEEEecccccchhHHHHHHHH
Confidence            99999999999998764 456789999999 7765443221 122333332   2345567899999876 999999999


Q ss_pred             HHhC----CCcEEEEEeCCcc---HHHHHHHhcC-CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCC
Q 009759          345 MDRL----PEARIAFIGDGPY---REELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI  416 (526)
Q Consensus       345 ~~~l----~~~~l~ivG~g~~---~~~l~~l~~~-~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~  416 (526)
                      ++.+    +++++++ |.|+.   .+.++++... .+|.|.|+++..++..+|+.||++|+||     |++++|||++|+
T Consensus       229 ~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~  302 (375)
T 3beo_A          229 IKRLVDKHEDVQVVY-PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGV  302 (375)
T ss_dssp             HHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTC
T ss_pred             HHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCC
Confidence            9765    6788654 65543   3455555432 4899999999899999999999999998     777999999999


Q ss_pred             cEEEeCC-CCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009759          417 PVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       417 PvI~~~~-gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly  492 (526)
                      |||+++. |+..+++   +++ +|++++. |+++++++|.++++|++.+++|+++++++.++|+|+.+++.+. +++
T Consensus       303 Pvi~~~~~~~~~e~v---~~g-~g~~v~~-d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~  373 (375)
T 3beo_A          303 PVLVLRDTTERPEGI---EAG-TLKLAGT-DEETIFSLADELLSDKEAHDKMSKASNPYGDGRASERIVEAIL-KHF  373 (375)
T ss_dssp             CEEECSSCCSCHHHH---HTT-SEEECCS-CHHHHHHHHHHHHHCHHHHHHHCCCCCTTCCSCHHHHHHHHHH-HHT
T ss_pred             CEEEecCCCCCceee---cCC-ceEEcCC-CHHHHHHHHHHHHhChHhHhhhhhcCCCCCCCcHHHHHHHHHH-HHh
Confidence            9999964 8999998   777 9999976 9999999999999999999999999887777899999999886 444

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=100.00  E-value=5e-33  Score=279.79  Aligned_cols=355  Identities=14%  Similarity=0.070  Sum_probs=244.6

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCC-eEEEEEeCCCCCccccCceeccccc-cCCCccc--cccc--hhcc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGD-EVMVVTTHEGVPQEFYGAKLIGSRS-FPCPWYQ--KVPL--SLAL  192 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~-~V~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~--~~~~  192 (526)
                      |||++++...      +....+..++++|+++|+ +|.++................++.. +......  ....  ....
T Consensus         1 mkIl~v~~~~------~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (384)
T 1vgv_A            1 MKVLTVFGTR------PEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRI   74 (384)
T ss_dssp             CEEEEEECSH------HHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHH
T ss_pred             CeEEEEeccc------HHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCCCccHHHHHHHH
Confidence            8999987531      123446789999999994 8887765432111000001111111 1111110  0010  1223


Q ss_pred             cHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHH-HhhcCcEEEe
Q 009759          193 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKF-LHRAADLTLV  271 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~ii~  271 (526)
                      ...+.+++++.+||+||+++.....+.+.++++..++|++++.|+.....  .  ...   ......+. +.+.+|.+++
T Consensus        75 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~--~--~~~---~~~~~~~~~~~~~~d~ii~  147 (384)
T 1vgv_A           75 LEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD--L--YSP---WPEEANRTLTGHLAMYHFS  147 (384)
T ss_dssp             HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC--T--TSS---TTHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc--c--cCC---CchHhhHHHHHhhccEEEc
Confidence            46788889999999999997644445555667788999998888753210  0  000   11122333 3567999999


Q ss_pred             CChhHHHHHHHhcccCCCcEEEeecCC-CCCCCCCCc------ccHHHHHhhc-CCCCCCcEEEEEeccccc-ccHHHHH
Q 009759          272 PSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRF------RSSEMRWRLS-NGEPDKPLIVHVGRLGVE-KSLDFLK  342 (526)
Q Consensus       272 ~S~~~~~~l~~~~~~~~~ki~vi~ngi-d~~~~~~~~------~~~~~~~~~~-~~~~~~~~i~~vG~l~~~-Kg~~~li  342 (526)
                      +|+..++.+.+.+ .+.+++.+++||+ |...+.+..      .....+.+++ ...+++.+++++||+... ||++.++
T Consensus       148 ~s~~~~~~l~~~g-~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li  226 (384)
T 1vgv_A          148 PTETSRQNLLREN-VADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEIC  226 (384)
T ss_dssp             SSHHHHHHHHHTT-CCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHH
T ss_pred             CcHHHHHHHHHcC-CChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHHH
Confidence            9999999998764 4567899999995 322111100      0012333333 222344578899999876 9999999


Q ss_pred             HHHHhC----CCcEEEEE-eCCc-cHHHHHHHhcC-CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcC
Q 009759          343 RVMDRL----PEARIAFI-GDGP-YREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSG  415 (526)
Q Consensus       343 ~a~~~l----~~~~l~iv-G~g~-~~~~l~~l~~~-~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G  415 (526)
                      +|+..+    +++++++. |.++ ..+.++++... .+|.+.|+++.+++.++|+.||++|+||     |+.++|||++|
T Consensus       227 ~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G  301 (384)
T 1vgv_A          227 HALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLG  301 (384)
T ss_dssp             HHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGT
T ss_pred             HHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcC
Confidence            999765    68888885 5443 55667666543 4899999998899999999999999999     44489999999


Q ss_pred             CcEEEeCC-CCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 009759          416 IPVVGVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       416 ~PvI~~~~-gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~  494 (526)
                      +|||+++. |+..+++   +++ +|+++++ |+++++++|.++++|++.+++|+++++++.+.|+|+.+++.+. ++|++
T Consensus       302 ~PvI~~~~~~~~~e~v---~~g-~g~lv~~-d~~~la~~i~~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~  375 (384)
T 1vgv_A          302 KPVLVMRDTTERPEAV---TAG-TVRLVGT-DKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALK-NNRIS  375 (384)
T ss_dssp             CCEEEESSCCSCHHHH---HHT-SEEEECS-SHHHHHHHHHHHHHCHHHHHHHHSSCCTTCCSCHHHHHHHHHH-HTCCC
T ss_pred             CCEEEccCCCCcchhh---hCC-ceEEeCC-CHHHHHHHHHHHHhChHHHhhhhhccCCCcCCCHHHHHHHHHH-HHHHh
Confidence            99999986 8889988   667 9999977 9999999999999999999999998887767899999999996 77776


Q ss_pred             HHHH
Q 009759          495 AIWF  498 (526)
Q Consensus       495 ~l~~  498 (526)
                      +...
T Consensus       376 ~~~~  379 (384)
T 1vgv_A          376 LGSH  379 (384)
T ss_dssp             C---
T ss_pred             hccc
Confidence            6543

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=99.98  E-value=3.1e-31  Score=280.66  Aligned_cols=331  Identities=10%  Similarity=0.034  Sum_probs=241.4

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHH--HHHCCCeEEEEEeCCCCCcccc-CceeccccccCCCccccccchhc
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKY--LREMGDEVMVVTTHEGVPQEFY-GAKLIGSRSFPCPWYQKVPLSLA  191 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~--L~~~G~~V~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  191 (526)
                      ..++|||++++..+   ..||.+..+.++++.  +.+.||+|++++.......... ...... ......        ..
T Consensus       202 ~~~~~rI~~~~~~~---~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~  269 (568)
T 2vsy_A          202 SKGPLRVGFVSNGF---GAHPTGLLTVALFEALQRRQPDLQMHLFATSGDDGSTLRTRLAQAS-TLHDVT--------AL  269 (568)
T ss_dssp             SSSCEEEEEEESCS---SSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSCHHHHHHHHTS-EEEECT--------TC
T ss_pred             CCCCeEEEEECccc---ccChHHHHHHHHHhhccCCcccEEEEEEECCCCCccHHHHHHHhcC-eEEECC--------CC
Confidence            46779999998753   347889999999999  7888999999987532111110 000000 000000        11


Q ss_pred             ccHHHHHHHHhcCCCEEEECCCchHH-HHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEE
Q 009759          192 LSPRIISEVARFKPDIIHASSPGIMV-FGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTL  270 (526)
Q Consensus       192 ~~~~l~~~l~~~~pDiV~~~~~~~~~-~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii  270 (526)
                      ....+.+.+++.+|||||.+..+... ....+ + ....|++++.|++.... .   ....          .+..+|.++
T Consensus       270 ~~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~-~---~~~~----------~~~~~d~~i  333 (568)
T 2vsy_A          270 GHLATAKHIRHHGIDLLFDLRGWGGGGRPEVF-A-LRPAPVQVNWLAYPGTS-G---APWM----------DYVLGDAFA  333 (568)
T ss_dssp             CHHHHHHHHHHTTCSEEEECSSCTTCSSCHHH-H-TCCSSEEEEESSSSSCC-C---CTTC----------CEEEECTTT
T ss_pred             CHHHHHHHHHhCCCCEEEECCCCCCcchHHHH-h-cCCCceeEeeecCCccc-C---CCCc----------eEEEECCCc
Confidence            24578888999999999986543211 11122 2 23568888888643211 0   0000          122478888


Q ss_pred             eCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC--
Q 009759          271 VPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--  348 (526)
Q Consensus       271 ~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l--  348 (526)
                      ++|+..++     +.   +++.+|||.+......+.......+.++++  ++..+++++|++.+ ||++.+++++..+  
T Consensus       334 ~~s~~~~~-----~~---~~i~~ipn~~~~~~~~~~~~~~~~r~~~~~--~~~~~v~~~g~~~~-K~~~~li~a~~~l~~  402 (568)
T 2vsy_A          334 LPPALEPF-----YS---EHVLRLQGAFQPSDTSRVVAEPPSRTQCGL--PEQGVVLCCFNNSY-KLNPQSMARMLAVLR  402 (568)
T ss_dssp             SCTTTGGG-----CS---SEEEECSSCSCCCCTTCCCCCCCCTGGGTC--CTTSCEEEECCCGG-GCCHHHHHHHHHHHH
T ss_pred             CCcccccC-----Cc---ceeEcCCCcCCCCCCCCCCCCCCCccccCC--CCCCEEEEeCCccc-cCCHHHHHHHHHHHH
Confidence            88886543     22   689999996554322111112223334433  33446679999999 9999999998765  


Q ss_pred             --CCcEEEEEe-CCccHHHHHHHhcC-----CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEE
Q 009759          349 --PEARIAFIG-DGPYREELEKMFTG-----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  420 (526)
Q Consensus       349 --~~~~l~ivG-~g~~~~~l~~l~~~-----~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~  420 (526)
                        |+++|+|+| +|+..+.+++++.+     .+|+|+|+++++++..+|+.||++|+||.+ |+|++++|||+||+|||+
T Consensus       403 ~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~  481 (568)
T 2vsy_A          403 EVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLT  481 (568)
T ss_dssp             HCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEB
T ss_pred             hCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEe
Confidence              799999999 88888888877763     359999999999999999999999999999 999999999999999999


Q ss_pred             -------eCCC-------CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH---HhCCHHHH
Q 009759          421 -------VRAG-------GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM---EKYDWRAA  483 (526)
Q Consensus       421 -------~~~g-------g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~---~~fs~~~~  483 (526)
                             +++|       |+.|++   .+          |+++++++|.++++|++.++++++++++.+   +.|+|+.+
T Consensus       482 ~~g~~~~s~~~~~~l~~~g~~e~v---~~----------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~  548 (568)
T 2vsy_A          482 TPGETFAARVAGSLNHHLGLDEMN---VA----------DDAAFVAKAVALASDPAALTALHARVDVLRRASGVFHMDGF  548 (568)
T ss_dssp             CCCSSGGGSHHHHHHHHHTCGGGB---CS----------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHH
T ss_pred             ccCCCchHHHHHHHHHHCCChhhh---cC----------CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHHH
Confidence                   9999       999988   33          899999999999999999999999999998   57999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009759          484 TRTIRNEQYNAAIWFW  499 (526)
Q Consensus       484 ~~~~~~~ly~~~l~~~  499 (526)
                      +++++ ++|+++++++
T Consensus       549 ~~~~~-~~y~~~~~~~  563 (568)
T 2vsy_A          549 ADDFG-ALLQALARRH  563 (568)
T ss_dssp             HHHHH-HHHHHHHHTT
T ss_pred             HHHHH-HHHHHHHHHH
Confidence            99997 8999998765

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=99.97  E-value=2e-29  Score=257.84  Aligned_cols=293  Identities=14%  Similarity=0.125  Sum_probs=207.1

Q ss_pred             cCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccc----cc---cc-cc----------cccchHHHHHHHHhh
Q 009759          203 FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI----PR---YT-FS----------WLVKPMWLVIKFLHR  264 (526)
Q Consensus       203 ~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~---~~-~~----------~~~~~~~~~~~~~~~  264 (526)
                      ++|||+|+|+|.......++..+..++++|+++|.......    ..   +. ..          ........+++....
T Consensus       180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~  259 (725)
T 3nb0_A          180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAH  259 (725)
T ss_dssp             SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHH
Confidence            46899999999776655555445669999999999631100    00   00 00          001123467888999


Q ss_pred             cCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcc----cHHHHHhh----------cCCC--CCCcEEEE
Q 009759          265 AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFR----SSEMRWRL----------SNGE--PDKPLIVH  328 (526)
Q Consensus       265 ~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~----~~~~~~~~----------~~~~--~~~~~i~~  328 (526)
                      .||.|+|+|+.+++++...+..+.+.+  |+||||.+.|.|...    +...+.++          ++..  ++.+++..
T Consensus       260 ~AD~ITTVS~~yA~Ei~~Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifi  337 (725)
T 3nb0_A          260 SADVFTTVSQITAFEAEHLLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFI  337 (725)
T ss_dssp             HSSEEEESSHHHHHHHHHHTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEE
T ss_pred             hCCEEEECCHHHHHHHHHHhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEE
Confidence            999999999999999999876554544  999999999988521    11111111          1222  34455666


Q ss_pred             Eeccc-ccccHHHHHHHHHhCC--------C---cEEEEEeCCc---cH-------------------------------
Q 009759          329 VGRLG-VEKSLDFLKRVMDRLP--------E---ARIAFIGDGP---YR-------------------------------  362 (526)
Q Consensus       329 vG~l~-~~Kg~~~li~a~~~l~--------~---~~l~ivG~g~---~~-------------------------------  362 (526)
                      +||+. .+||+|.+++|+.++.        +   +.|+++..+.   ..                               
T Consensus       338 vgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~  417 (725)
T 3nb0_A          338 AGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHA  417 (725)
T ss_dssp             ESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            89998 7899999999998762        1   5667765331   00                               


Q ss_pred             ----------------H------H---HH------------------------------HHhc--C------C--CeEEe
Q 009759          363 ----------------E------E---LE------------------------------KMFT--G------M--PAVFT  377 (526)
Q Consensus       363 ----------------~------~---l~------------------------------~l~~--~------~--~V~~~  377 (526)
                                      +      .   ++                              ..++  +      .  +|.|+
T Consensus       418 ~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~  497 (725)
T 3nb0_A          418 IRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFH  497 (725)
T ss_dssp             HHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEEC
T ss_pred             hcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEe
Confidence                            0      0   00                              0000  0      0  13444


Q ss_pred             -cccChh------hHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCC-------ceeEeeC
Q 009759          378 -GMLLGE------ELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDG-------KIGYLFN  443 (526)
Q Consensus       378 -g~v~~~------~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~-------~~g~~~~  443 (526)
                       ++++..      ++.++|+.||++|+||.+|+||++++||||||+|||+++.||+.+.+   .++       .+|+++.
T Consensus       498 P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V---~dg~~~~~~~~tG~lV~  574 (725)
T 3nb0_A          498 PEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYM---EDLIETNQAKDYGIYIV  574 (725)
T ss_dssp             CSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHH---HTTSCHHHHHHTTEEEE
T ss_pred             ccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhh---hccccccCCCCceEEEe
Confidence             677665      58999999999999999999999999999999999999999999998   544       4688773


Q ss_pred             ---CCCHHHHHHHHHHhhh-----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Q 009759          444 ---PGDLDDCLSKLEPLLY-----NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWFWRK  501 (526)
Q Consensus       444 ---~~d~~~la~ai~~ll~-----d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~~~~~  501 (526)
                         +.|+++++++|.+++.     ++..+..+++++++.+++|+|++++++++ ++|++++.+...
T Consensus       575 ~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl-~~Ye~aL~~~~~  639 (725)
T 3nb0_A          575 DRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYV-KARQLALRRGYP  639 (725)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHH-HHHHHHHHHHCH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHhhccc
Confidence               4466666666655543     68888999999988888999999999998 899999976543

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=99.96  E-value=7.8e-29  Score=253.23  Aligned_cols=275  Identities=16%  Similarity=0.116  Sum_probs=206.1

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  283 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~  283 (526)
                      .+|+||+|+++...+..++.....++|+++++|..++.........+    ...+.+ .+-.+|.+...+....+.+...
T Consensus       123 ~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp~~~~~~~lp~----~~~il~-~ll~~d~i~f~~~~~~~~f~~~  197 (482)
T 1uqt_A          123 DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPT----YDTLLE-QLCDYDLLGFQTENDRLAFLDC  197 (482)
T ss_dssp             TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTSTT----HHHHHH-HHTTSSEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCCCHHHHhhCcc----HHHHHH-hhhccCeEEEECHHHHHHHHHH
Confidence            56999999987666665554455589999999997653211111111    111222 2345788888777666555421


Q ss_pred             -----------------cccCCCcEEEeecCCCCCCCCCCcc------cHHHHHhhcCCCCCCcEEEEEecccccccHHH
Q 009759          284 -----------------RVTAANKIRIWKKGVDSESFHPRFR------SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDF  340 (526)
Q Consensus       284 -----------------~~~~~~ki~vi~ngid~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~  340 (526)
                                       ++ ...++.++|||||.+.|.+...      ...++.+++    ++++|+++||+++.||++.
T Consensus       198 ~~~~l~~~~~~~~~~~~~g-~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~----~~~vil~VgRl~~~Kgi~~  272 (482)
T 1uqt_A          198 LSNLTRVTTRSAKSHTAWG-KAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK----NVQNIFSVERLDYSKGLPE  272 (482)
T ss_dssp             HHHHSCEEEETTTEEEETT-EEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT----TCEEEEEECCBCGGGCHHH
T ss_pred             HHHHhCCccccCCeEEECC-eEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC----CCEEEEEEeCCcccCCHHH
Confidence                             11 2357899999999887643211      234444442    6789999999999999999


Q ss_pred             HHHHHHhC----C----CcEEEEEeC-----Cc----cHHHHHHHhcC----------CCeEE-ecccChhhHHHHHHcC
Q 009759          341 LKRVMDRL----P----EARIAFIGD-----GP----YREELEKMFTG----------MPAVF-TGMLLGEELSQAYASG  392 (526)
Q Consensus       341 li~a~~~l----~----~~~l~ivG~-----g~----~~~~l~~l~~~----------~~V~~-~g~v~~~~l~~~~~~a  392 (526)
                      +++|++.+    |    +++|+++|.     ++    ..+++++++.+          .+|.+ .|.++.+++..+|+.|
T Consensus       273 ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~A  352 (482)
T 1uqt_A          273 RFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS  352 (482)
T ss_dssp             HHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHc
Confidence            99999866    3    367999984     22    23344444332          13664 6899999999999999


Q ss_pred             cEEEecCCCCCCcHHHHHHHHcCC-----cEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHH
Q 009759          393 DVFVMPSESETLGLVVLEAMSSGI-----PVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRET  466 (526)
Q Consensus       393 Dv~v~ps~~e~~~~~ilEAma~G~-----PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~  466 (526)
                      |++|+||..||||++++||||||+     |+|+++.+|..+.+   .   +|+++++.|+++++++|.++++ +++.+++
T Consensus       353 Dv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---~---~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~  426 (482)
T 1uqt_A          353 DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---T---SALIVNPYDRDEVAAALDRALTMSLAERIS  426 (482)
T ss_dssp             SEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---T---TSEEECTTCHHHHHHHHHHHHTCCHHHHHH
T ss_pred             cEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh---C---CeEEECCCCHHHHHHHHHHHHcCCHHHHHH
Confidence            999999999999999999999997     89999988888877   3   6899999999999999999998 5678999


Q ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 009759          467 MGQAARQEMEKYDWRAATRTIRNEQYNAA  495 (526)
Q Consensus       467 ~~~~a~~~~~~fs~~~~~~~~~~~ly~~~  495 (526)
                      +++++++.+++|+|+.++++++ +.|+++
T Consensus       427 ~~~~~~~~v~~~s~~~~a~~~l-~~l~~~  454 (482)
T 1uqt_A          427 RHAEMLDVIVKNDINHWQECFI-SDLKQI  454 (482)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHH-HHHHHS
T ss_pred             HHHHHHHHHHhCCHHHHHHHHH-HHHHhc
Confidence            9999999998899999999998 677665

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.96  E-value=2.3e-27  Score=237.76  Aligned_cols=345  Identities=17%  Similarity=0.147  Sum_probs=226.9

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCCCccccCceeccccc-cCCCccc-cc---cchhcc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGVPQEFYGAKLIGSRS-FPCPWYQ-KV---PLSLAL  192 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~---~~~~~~  192 (526)
                      |||++++...+  ..    .....++++|.+. ||+|.+++...............++.. +...... ..   ......
T Consensus         6 mkIl~v~~~~~--~~----~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (376)
T 1v4v_A            6 KRVVLAFGTRP--EA----TKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARI   79 (376)
T ss_dssp             EEEEEEECSHH--HH----HHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHH
T ss_pred             eEEEEEEeccH--HH----HHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCCCCccHHHHHHHH
Confidence            89999986421  11    2346789999998 799888765432110000001111110 0111100 00   001123


Q ss_pred             cHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeC
Q 009759          193 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  272 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  272 (526)
                      ...+.+++++++||+||+|+.....+.+.++++..++|++...++... .  .....+   ......+.+.+.+|.++++
T Consensus        80 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~-~--~~~~~~---~~~~~~~~~~~~~~~~~~~  153 (376)
T 1v4v_A           80 LPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS-G--NLKEPF---PEEANRRLTDVLTDLDFAP  153 (376)
T ss_dssp             HHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC-S--CTTSST---THHHHHHHHHHHCSEEEES
T ss_pred             HHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcc-c--cccCCC---chHHHHHHHHHHhceeeCC
Confidence            456778888999999999976555555566778889998643333211 1  000000   1113344566779999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeecCC-CCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC---
Q 009759          273 SVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL---  348 (526)
Q Consensus       273 S~~~~~~l~~~~~~~~~ki~vi~ngi-d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l---  348 (526)
                      |+..++.+.+.+ .+.+++.+++|++ |...+.+.  ....+.+  + .+++.+++++||+...||++.+++|++.+   
T Consensus       154 s~~~~~~l~~~g-~~~~ki~vi~n~~~d~~~~~~~--~~~~~~~--~-~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~  227 (376)
T 1v4v_A          154 TPLAKANLLKEG-KREEGILVTGQTGVDAVLLAAK--LGRLPEG--L-PEGPYVTVTMHRRENWPLLSDLAQALKRVAEA  227 (376)
T ss_dssp             SHHHHHHHHTTT-CCGGGEEECCCHHHHHHHHHHH--HCCCCTT--C-CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcC-CCcceEEEECCchHHHHhhhhh--hhHHHHh--c-CCCCEEEEEeCcccchHHHHHHHHHHHHHHhh
Confidence            999999998764 3567899999865 32111000  0000011  1 23445677899998888999999999765   


Q ss_pred             -CCcEEEEE-eCCc-cHHHHHHHhcC-CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe-CC
Q 009759          349 -PEARIAFI-GDGP-YREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV-RA  423 (526)
Q Consensus       349 -~~~~l~iv-G~g~-~~~~l~~l~~~-~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~-~~  423 (526)
                       ++++++++ |.++ ..+.+++++.. .+|.+.|+++..++..+|+.||++|.||     +..++|||++|+|||++ +.
T Consensus       228 ~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S-----~g~~lEA~a~G~PvI~~~~~  302 (376)
T 1v4v_A          228 FPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-----GGLQEEGAALGVPVVVLRNV  302 (376)
T ss_dssp             CTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----HHHHHHHHHTTCCEEECSSS
T ss_pred             CCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECC-----cCHHHHHHHcCCCEEeccCC
Confidence             68898886 7665 56777776543 4799999888889999999999999998     33488999999999987 56


Q ss_pred             CCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 009759          424 GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  496 (526)
Q Consensus       424 gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l  496 (526)
                      ++..+++   +++ +|++++ .|+++++++|.++++|++.+++|++++    +.|.+...++++. +++.+++
T Consensus       303 ~~~~~~~---~~g-~g~lv~-~d~~~la~~i~~ll~d~~~~~~~~~~~----~~~~~~~~~~~i~-~~i~~~~  365 (376)
T 1v4v_A          303 TERPEGL---KAG-ILKLAG-TDPEGVYRVVKGLLENPEELSRMRKAK----NPYGDGKAGLMVA-RGVAWRL  365 (376)
T ss_dssp             CSCHHHH---HHT-SEEECC-SCHHHHHHHHHHHHTCHHHHHHHHHSC----CSSCCSCHHHHHH-HHHHHHT
T ss_pred             Ccchhhh---cCC-ceEECC-CCHHHHHHHHHHHHhChHhhhhhcccC----CCCCCChHHHHHH-HHHHHHh
Confidence            8888877   444 788885 499999999999999999999988633    4566666777776 5555544

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.95  E-value=8.2e-27  Score=235.18  Aligned_cols=275  Identities=14%  Similarity=0.087  Sum_probs=212.1

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  283 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~  283 (526)
                      .-|+|++|+++.+.++.++..+..+.++.+.+|..+|...--....   ..++......+-.+|.|.+.+....+.+.+.
T Consensus       149 ~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp---~~~r~ell~gll~~DligF~t~~y~~~Fl~~  225 (496)
T 3t5t_A          149 ADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILP---KEIRTGILHGMLPATTIGFFADRWCRNFLES  225 (496)
T ss_dssp             SSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSC---HHHHHHHHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCc---HhHHHHHHHHHHhCCEEEEecHHHHHHHHHH
Confidence            4689999999998888887777789999999999876432211111   1012223344567999999999888775442


Q ss_pred             ----c-cc-------------CCCcEEEeecCCCCCCCCCCcc--cHHHHHhhcCCCCCCcEEEEEecccccccHHHHHH
Q 009759          284 ----R-VT-------------AANKIRIWKKGVDSESFHPRFR--SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKR  343 (526)
Q Consensus       284 ----~-~~-------------~~~ki~vi~ngid~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~  343 (526)
                          . +.             ...++.++|+|||.+.|.+...  ...++.+++    ++++|+++||+++.||++.+++
T Consensus       226 ~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~----~~~lIl~VgRLd~~KGi~~lL~  301 (496)
T 3t5t_A          226 VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD----GHRLVVHSGRTDPIKNAERAVR  301 (496)
T ss_dssp             HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT----TSEEEEEEEESSGGGCHHHHHH
T ss_pred             HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC----CceEEEEcccCccccCHHHHHH
Confidence                1 11             1136789999999998876532  244555553    5789999999999999999999


Q ss_pred             HHHhC----CC---cEEEEEe-----CCccH----HHHHHHhcCC-------CeEEecccChhhHHHHHHcCcEEEecCC
Q 009759          344 VMDRL----PE---ARIAFIG-----DGPYR----EELEKMFTGM-------PAVFTGMLLGEELSQAYASGDVFVMPSE  400 (526)
Q Consensus       344 a~~~l----~~---~~l~ivG-----~g~~~----~~l~~l~~~~-------~V~~~g~v~~~~l~~~~~~aDv~v~ps~  400 (526)
                      |+ ++    |+   +.|+++|     +++..    +++++++.+.       .|+|+|.++.+++..+|+.||++|+||.
T Consensus       302 Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~Sl  380 (496)
T 3t5t_A          302 AF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNST  380 (496)
T ss_dssp             HH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCS
T ss_pred             HH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcc
Confidence            99 55    54   4577776     33332    3444443322       5999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHcC---CcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhC-HHHHHHHHHHHHHHHH
Q 009759          401 SETLGLVVLEAMSSG---IPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN-QELRETMGQAARQEME  476 (526)
Q Consensus       401 ~e~~~~~ilEAma~G---~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d-~~~~~~~~~~a~~~~~  476 (526)
                      .||||++.+||||||   .|+|+|..+|..+.+     +.+|+++++.|+++++++|.+++.+ ++.++++.++.++.++
T Consensus       381 rEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l-----~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~  455 (496)
T 3t5t_A          381 VDGQNLSTFEAPLVNERDADVILSETCGAAEVL-----GEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAAR  455 (496)
T ss_dssp             SBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH-----GGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT
T ss_pred             cccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh-----CCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            999999999999997   899999999988888     3479999999999999999999985 5788888999999999


Q ss_pred             hCCHHHHHHHHHHHH
Q 009759          477 KYDWRAATRTIRNEQ  491 (526)
Q Consensus       477 ~fs~~~~~~~~~~~l  491 (526)
                      ++++...++.+++++
T Consensus       456 ~~d~~~W~~~fl~~L  470 (496)
T 3t5t_A          456 PWTLEAWVQAQLDGL  470 (496)
T ss_dssp             TCBHHHHHHHHHHHH
T ss_pred             HCCHHHHHHHHHHHH
Confidence            999999999998655

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.95  E-value=2.7e-27  Score=215.20  Aligned_cols=180  Identities=23%  Similarity=0.335  Sum_probs=158.4

Q ss_pred             eecCCCCCCCC--CCcc-----cHHHHHhhcCCCCCCcEEEEEeccc-ccccHHHHHHHHHhC------CCcEEEEEeCC
Q 009759          294 WKKGVDSESFH--PRFR-----SSEMRWRLSNGEPDKPLIVHVGRLG-VEKSLDFLKRVMDRL------PEARIAFIGDG  359 (526)
Q Consensus       294 i~ngid~~~~~--~~~~-----~~~~~~~~~~~~~~~~~i~~vG~l~-~~Kg~~~li~a~~~l------~~~~l~ivG~g  359 (526)
                      ||||+|.+.|.  +...     ....+.+++.  ++.++|+|+|++. +.||++.++++++.+      ++++|+|+|.+
T Consensus         2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~--~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~   79 (200)
T 2bfw_A            2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGM--DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG   79 (200)
T ss_dssp             ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTC--CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCB
T ss_pred             CCCccChhhccccccccchhhHHHHHHHHcCC--CCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCC
Confidence            79999999998  7643     5566666654  3556999999999 999999999999877      47999999998


Q ss_pred             c--cHHHHHHHhcCC-CeEE-ecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCC
Q 009759          360 P--YREELEKMFTGM-PAVF-TGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQD  435 (526)
Q Consensus       360 ~--~~~~l~~l~~~~-~V~~-~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~  435 (526)
                      +  ..+.+++++++. +|++ +|+++++++..+|+.||++|+||..|++|++++|||++|+|||+++.++..+++    +
T Consensus        80 ~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~----~  155 (200)
T 2bfw_A           80 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII----T  155 (200)
T ss_dssp             CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC----C
T ss_pred             ChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChHHHc----C
Confidence            8  778888877755 7999 999999999999999999999999999999999999999999999999999988    4


Q ss_pred             CceeEeeCCCCHHHHHHHHHHhhh-CHHHHHHHHHHHHHHHHhCC
Q 009759          436 GKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYD  479 (526)
Q Consensus       436 ~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~~~a~~~~~~fs  479 (526)
                      +.+|++++++|+++++++|.++++ |++.++++++++++.+++||
T Consensus       156 ~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~fs  200 (200)
T 2bfw_A          156 NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS  200 (200)
T ss_dssp             TTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred             CCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC
Confidence            678999999999999999999999 99999999999999985575

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.95  E-value=4.4e-27  Score=207.05  Aligned_cols=158  Identities=23%  Similarity=0.344  Sum_probs=138.4

Q ss_pred             CcEEEEEecccccccHHHHHHHHHhC---CCcEEEEEeCCccHHHHHHHhcCC--CeEEecccChhhHHHHHHcCcEEEe
Q 009759          323 KPLIVHVGRLGVEKSLDFLKRVMDRL---PEARIAFIGDGPYREELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVM  397 (526)
Q Consensus       323 ~~~i~~vG~l~~~Kg~~~li~a~~~l---~~~~l~ivG~g~~~~~l~~l~~~~--~V~~~g~v~~~~l~~~~~~aDv~v~  397 (526)
                      +++|+|+|++.+.||++.++++++.+   ++++|+++|+|+..+.+++++++.  +|.+ |+++.+++..+|+.||++|+
T Consensus         2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v~   80 (166)
T 3qhp_A            2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYVH   80 (166)
T ss_dssp             CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEEE
T ss_pred             ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEEE
Confidence            46899999999999999999999998   479999999999888888887754  6888 99999999999999999999


Q ss_pred             cCCCCCCcHHHHHHHHcCC-cEEE-eCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH
Q 009759          398 PSESETLGLVVLEAMSSGI-PVVG-VRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM  475 (526)
Q Consensus       398 ps~~e~~~~~ilEAma~G~-PvI~-~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~  475 (526)
                      ||..|++|++++|||++|+ |||+ ++.|+..+++   .++.+  +++++|+++++++|.++++|++.++++++++++.+
T Consensus        81 ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~---~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~  155 (166)
T 3qhp_A           81 AANVESEAIACLEAISVGIVPVIANSPLSATRQFA---LDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSA  155 (166)
T ss_dssp             CCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGC---SSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             CCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhc---cCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            9999999999999999998 9999 5688899998   55543  77888999999999999999999999999999999


Q ss_pred             HhCCHHHHHHH
Q 009759          476 EKYDWRAATRT  486 (526)
Q Consensus       476 ~~fs~~~~~~~  486 (526)
                      ++|+|+.++++
T Consensus       156 ~~~s~~~~~~~  166 (166)
T 3qhp_A          156 LNYTLENSVIQ  166 (166)
T ss_dssp             HHHC-------
T ss_pred             HHCChhhhhcC
Confidence            99999998763

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=99.94  E-value=3.3e-25  Score=216.03  Aligned_cols=317  Identities=15%  Similarity=0.056  Sum_probs=220.1

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      .-|++-+.....+ ....++...-....+.+.+.|++-.-+...+......                      -.....+
T Consensus         9 ~~m~~~i~~~~~~-~~~~a~~ka~~dv~~i~~~~G~~~l~~~~~~~~~~~~----------------------~~~~~~~   65 (339)
T 3rhz_A            9 ACMRVYITNINGQ-SIQSTAQLCQNTVTDVAVSLGYRELGIYCYQIHTDSE----------------------SELSKRL   65 (339)
T ss_dssp             -CCCEEEEEEESS-CTTCHHHHHHHHHHHHHHHTTCEEEEEECCCGGGSCH----------------------HHHHHHH
T ss_pred             hhhheeeecccCc-cccchHHHHHHHHHHHHHHCCCeEEEeeccccccccH----------------------HHHHHHH
Confidence            3478755544322 3445666666777778888899866554211100000                      0001122


Q ss_pred             HHHHHh-cCCCEEEECCCchH--HHHHHHHHH--hcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEe
Q 009759          197 ISEVAR-FKPDIIHASSPGIM--VFGALIIAK--LLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  271 (526)
Q Consensus       197 ~~~l~~-~~pDiV~~~~~~~~--~~~~~~~~~--~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  271 (526)
                      ..++.. .++|+|+++.|...  .+...++.+  ..++|+|+.+||.++.....      .+.....++.+++.||.|++
T Consensus        66 ~~~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~~------~~~~~~~E~~~y~~aD~Ii~  139 (339)
T 3rhz_A           66 DGIVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFSG------NFYLMDRTIAYYNKADVVVA  139 (339)
T ss_dssp             HHHTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCGG------GGGGHHHHHHHHTTCSEEEE
T ss_pred             HHHHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCcc------chhhHHHHHHHHHHCCEEEE
Confidence            222322 37899999987642  222233333  44999999999987754322      11223468999999999999


Q ss_pred             CChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCCCc
Q 009759          272 PSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEA  351 (526)
Q Consensus       272 ~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~  351 (526)
                      +|+.+++.+.+.+. +..++.++++. |...  +....         ...++++|+|+|+++....++.+      .+++
T Consensus       140 ~S~~~~~~l~~~G~-~~~ki~~~~~~-~~~~--~~~~~---------~~~~~~~i~yaG~l~k~~~L~~l------~~~~  200 (339)
T 3rhz_A          140 PSQKMIDKLRDFGM-NVSKTVVQGMW-DHPT--QAPMF---------PAGLKREIHFPGNPERFSFVKEW------KYDI  200 (339)
T ss_dssp             SCHHHHHHHHHTTC-CCSEEEECCSC-CCCC--CCCCC---------CCEEEEEEEECSCTTTCGGGGGC------CCSS
T ss_pred             CCHHHHHHHHHcCC-CcCceeecCCC-CccC--ccccc---------ccCCCcEEEEeCCcchhhHHHhC------CCCC
Confidence            99999999998764 44666554432 2211  11000         13356789999999854333221      2789


Q ss_pred             EEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCC-------CCCcHHHHHHHHcCCcEEEeCCC
Q 009759          352 RIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES-------ETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       352 ~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~-------e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      +|+|+|+|+..    .  .. ||+|+|+++.+++..+|+.+|+.++....       ..+|.+++||||+|+|||+++.+
T Consensus       201 ~f~ivG~G~~~----~--l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~  273 (339)
T 3rhz_A          201 PLKVYTWQNVE----L--PQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGI  273 (339)
T ss_dssp             CEEEEESCCCC----C--CT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTC
T ss_pred             eEEEEeCCccc----C--cC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccCh
Confidence            99999999864    1  22 89999999999999999999998886211       24699999999999999999999


Q ss_pred             CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 009759          425 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA  495 (526)
Q Consensus       425 g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~  495 (526)
                      +..+++   +++.+|++++  +.++++++|..+  +++.+++|++++++..+++++....++.+.+.+.++
T Consensus       274 ~~~~~v---~~~~~G~~~~--~~~e~~~~i~~l--~~~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~~  337 (339)
T 3rhz_A          274 ANQELI---ENNGLGWIVK--DVEEAIMKVKNV--NEDEYIELVKNVRSFNPILRKGFFTRRLLTESVFQA  337 (339)
T ss_dssp             TTTHHH---HHHTCEEEES--SHHHHHHHHHHC--CHHHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHHH
T ss_pred             hHHHHH---HhCCeEEEeC--CHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence            999999   8889999997  789999999987  567799999999999888888888888776665554

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.94  E-value=3.1e-26  Score=228.52  Aligned_cols=290  Identities=14%  Similarity=0.089  Sum_probs=203.7

Q ss_pred             CchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceecccc--ccCCCccccccchhcccHHHHHHHHhcCCCEEEEC
Q 009759          134 SGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSR--SFPCPWYQKVPLSLALSPRIISEVARFKPDIIHAS  211 (526)
Q Consensus       134 gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDiV~~~  211 (526)
                      .|....+..|+++|.++| +|.+.+............. .++.  .. .+        +.....+.+++++.+||+||++
T Consensus        50 ~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~~~~~~~~~-~~v~~~~~-~p--------~~~~~~l~~~l~~~~pDiv~~~  118 (374)
T 2xci_A           50 IGEFNTFLPILKELKREH-RILLTYFSPRAREYLKTKS-DFYDCLHP-LP--------LDNPFSVKRFEELSKPKALIVV  118 (374)
T ss_dssp             HHHHHHHHHHHHHHHHHS-CEEEEESCGGGHHHHHTTG-GGCSEEEE-CC--------CSSHHHHHHHHHHHCCSEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcC-CEEEEEcCCcHHHHHHHhc-ccccceeE-CC--------CCCHHHHHHHHHHhCCCEEEEE
Confidence            477788999999999999 8876665332111001000 1111  11 11        1234678889999999999986


Q ss_pred             CCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcE
Q 009759          212 SPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKI  291 (526)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki  291 (526)
                      .......  + +....+ |+++..+....            +   .+.+.+++.+|.++++|+..++.+.+.+. +  ++
T Consensus       119 ~~~~~~~--~-~~~~~~-p~~~~~~~~~~------------~---~~~~~~~~~~d~ii~~S~~~~~~l~~~g~-~--ki  176 (374)
T 2xci_A          119 EREFWPS--L-IIFTKV-PKILVNAYAKG------------S---LIEKILSKKFDLIIMRTQEDVEKFKTFGA-K--RV  176 (374)
T ss_dssp             SCCCCHH--H-HHHCCS-CEEEEEECCCC------------C---HHHHHHHTTCSEEEESCHHHHHHHHTTTC-C--SE
T ss_pred             CccCcHH--H-HHHHhC-CEEEEEeecCc------------h---HHHHHHHHhCCEEEECCHHHHHHHHHcCC-C--eE
Confidence            4332221  1 112223 77665443211            0   14677789999999999999999988743 3  89


Q ss_pred             EEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----CCcEEEEEeCCccH-HHHH
Q 009759          292 RIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----PEARIAFIGDGPYR-EELE  366 (526)
Q Consensus       292 ~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----~~~~l~ivG~g~~~-~~l~  366 (526)
                      .+++|+...... +.  .         ..-..+++++.|+  ..||++.+++|++.+    |+++|+|+|+|+.+ ++++
T Consensus       177 ~vi~n~~f~~~~-~~--~---------~~l~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~~~~~l~  242 (374)
T 2xci_A          177 FSCGNLKFICQK-GK--G---------IKLKGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIENAKIFE  242 (374)
T ss_dssp             EECCCGGGCCCC-CS--C---------CCCSSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGGGHHHHH
T ss_pred             EEcCCCccCCCc-Ch--h---------hhhcCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHHHHHHHH
Confidence            999997421111 10  0         0112256666664  468999999999766    68999999998876 5777


Q ss_pred             HHhcCC------------CeEEecccChhhHHHHHHcCcEEEecCCC-CCCcHHHHHHHHcCCcEEEe-CCCCCCceecc
Q 009759          367 KMFTGM------------PAVFTGMLLGEELSQAYASGDVFVMPSES-ETLGLVVLEAMSSGIPVVGV-RAGGIPDIIPE  432 (526)
Q Consensus       367 ~l~~~~------------~V~~~g~v~~~~l~~~~~~aDv~v~ps~~-e~~~~~ilEAma~G~PvI~~-~~gg~~e~v~~  432 (526)
                      +++++.            +|.+.|+.  +|+..+|+.||++++|+.+ |++|++++||||||+|||++ +.++.+|++  
T Consensus       243 ~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~--  318 (374)
T 2xci_A          243 KKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLK--  318 (374)
T ss_dssp             HHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHH--
T ss_pred             HHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHH--
Confidence            776543            35556655  7999999999998888654 67889999999999999975 778888887  


Q ss_pred             cCCC-ceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHH
Q 009759          433 DQDG-KIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEME  476 (526)
Q Consensus       433 ~~~~-~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~  476 (526)
                       ++. .+|+++..+|+++|+++|.++++| +.+++|++++++.++
T Consensus       319 -~~~~~~G~l~~~~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~  361 (374)
T 2xci_A          319 -EFLEKEGAGFEVKNETELVTKLTELLSV-KKEIKVEEKSREIKG  361 (374)
T ss_dssp             -HHHHHTTCEEECCSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHH
T ss_pred             -HHHHHCCCEEEeCCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHH
Confidence             442 467788888999999999999999 999999999999885

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.92  E-value=7.1e-25  Score=194.97  Aligned_cols=148  Identities=23%  Similarity=0.376  Sum_probs=131.7

Q ss_pred             CCCCcEEEEEecccccccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhc------CCCeEEecccChhhHHHHHHcCc
Q 009759          320 EPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFT------GMPAVFTGMLLGEELSQAYASGD  393 (526)
Q Consensus       320 ~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~------~~~V~~~g~v~~~~l~~~~~~aD  393 (526)
                      ..++++|+|+|++.+.||++.++++++.+++++|+|+|.++..+.++++++      ..+|+++|+++++++..+|+.||
T Consensus        20 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad   99 (177)
T 2f9f_A           20 KCYGDFWLSVNRIYPEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK   99 (177)
T ss_dssp             CCCCSCEEEECCSSGGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred             CCCCCEEEEEeccccccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence            456788999999999999999999999999999999998876666666555      23899999999999999999999


Q ss_pred             EEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHH-HHHHHHHH
Q 009759          394 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQEL-RETMGQAA  471 (526)
Q Consensus       394 v~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~-~~~~~~~a  471 (526)
                      ++|+|+..|++|++++|||++|+|||+++.++..+++   +++.+|+++ ++|+++++++|.++++|++. ++++++++
T Consensus       100 i~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i---~~~~~g~~~-~~d~~~l~~~i~~l~~~~~~~~~~~~~~a  174 (177)
T 2f9f_A          100 GLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETV---INEKTGYLV-NADVNEIIDAMKKVSKNPDKFKKDCFRRA  174 (177)
T ss_dssp             EEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHC---CBTTTEEEE-CSCHHHHHHHHHHHHHCTTTTHHHHHHHH
T ss_pred             EEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHh---cCCCccEEe-CCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999   888899999 88999999999999998875 44443333

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.91  E-value=4.5e-24  Score=214.25  Aligned_cols=343  Identities=14%  Similarity=0.084  Sum_probs=222.4

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCCCccccCceeccc-cccCCCc----cccccchhc
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGVPQEFYGAKLIGS-RSFPCPW----YQKVPLSLA  191 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~  191 (526)
                      .|||++|+..-|     + ...+..++++|++. |+++.++.++..........+..++ ..+.+..    .........
T Consensus        25 m~ki~~v~Gtr~-----~-~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~   98 (396)
T 3dzc_A           25 MKKVLIVFGTRP-----E-AIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSK   98 (396)
T ss_dssp             CEEEEEEECSHH-----H-HHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHH
T ss_pred             CCeEEEEEeccH-----h-HHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCCCCCHHHHHHH
Confidence            479999976433     2 34568899999987 7888777665432100000011111 0111111    011112234


Q ss_pred             ccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHH-HhhcCcEEE
Q 009759          192 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKF-LHRAADLTL  270 (526)
Q Consensus       192 ~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~ii  270 (526)
                      ....+.+++++++||+|++++.....+.+.+.++..++|++...++.. .      ..+.........+. +.+.+|.++
T Consensus        99 ~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~r-s------~~~~~~~~~~~~r~~~~~~a~~~~  171 (396)
T 3dzc_A           99 ILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLR-T------GNIYSPWPEEGNRKLTAALTQYHF  171 (396)
T ss_dssp             HHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCC-C------SCTTSSTTHHHHHHHHHHTCSEEE
T ss_pred             HHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-c------cccccCCcHHHHHHHHHHhcCEEE
Confidence            556788899999999999998766666666788899999764332211 1      01100111122333 467899999


Q ss_pred             eCChhHHHHHHHhcccCCCcEEEeecCC-CCCCCCCCc--c----cHHHHHhhcCCCCCCcE-EEEEecc-cccccHHHH
Q 009759          271 VPSVAIGKDLEAARVTAANKIRIWKKGV-DSESFHPRF--R----SSEMRWRLSNGEPDKPL-IVHVGRL-GVEKSLDFL  341 (526)
Q Consensus       271 ~~S~~~~~~l~~~~~~~~~ki~vi~ngi-d~~~~~~~~--~----~~~~~~~~~~~~~~~~~-i~~vG~l-~~~Kg~~~l  341 (526)
                      ++++..++.+.+.+. +.+++.+++|++ |...+.+..  .    ..+++.+++....++++ +++.+|. ...|+++.+
T Consensus       172 ~~se~~~~~l~~~G~-~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~l  250 (396)
T 3dzc_A          172 APTDTSRANLLQENY-NAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERI  250 (396)
T ss_dssp             ESSHHHHHHHHHTTC-CGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHH
T ss_pred             CCCHHHHHHHHHcCC-CcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHH
Confidence            999999999988764 667899999854 322211110  0    13344455421233444 4455454 345789999


Q ss_pred             HHHHHhC----CCcEEEEE-eCCc-cHHHHHHHhc-CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHc
Q 009759          342 KRVMDRL----PEARIAFI-GDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSS  414 (526)
Q Consensus       342 i~a~~~l----~~~~l~iv-G~g~-~~~~l~~l~~-~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~  414 (526)
                      ++|++.+    +++++++. |.++ ..+.++++.. ..+|.+.+++++.++..+|+.||++|.+|   |  +.++|||++
T Consensus       251 l~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G--g~~~EA~a~  325 (396)
T 3dzc_A          251 CQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G--GIQEEAPSL  325 (396)
T ss_dssp             HHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S--GGGTTGGGG
T ss_pred             HHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c--cHHHHHHHc
Confidence            9998776    68888885 5543 3555665433 34799999998889999999999999998   2  444899999


Q ss_pred             CCcEEEe-CCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          415 GIPVVGV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       415 G~PvI~~-~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      |+|+|++ +.++..+.+   ++| .++++.. |++++++++.++++|++.+++|++++.    .|.....++++.
T Consensus       326 G~PvV~~~~~~~~~e~v---~~G-~~~lv~~-d~~~l~~ai~~ll~d~~~~~~m~~~~~----~~~~~~aa~ri~  391 (396)
T 3dzc_A          326 GKPVLVMRETTERPEAV---AAG-TVKLVGT-NQQQICDALSLLLTDPQAYQAMSQAHN----PYGDGKACQRIA  391 (396)
T ss_dssp             TCCEEECCSSCSCHHHH---HHT-SEEECTT-CHHHHHHHHHHHHHCHHHHHHHHTSCC----TTCCSCHHHHHH
T ss_pred             CCCEEEccCCCcchHHH---HcC-ceEEcCC-CHHHHHHHHHHHHcCHHHHHHHhhccC----CCcCChHHHHHH
Confidence            9999998 778888888   666 4677654 899999999999999999999887654    344444555554

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.91  E-value=1.1e-23  Score=211.61  Aligned_cols=344  Identities=14%  Similarity=0.099  Sum_probs=221.0

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHC--CCeEEEEEeCCCCCccccCceeccc-cccCCCc----cccccch
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQEFYGAKLIGS-RSFPCPW----YQKVPLS  189 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~  189 (526)
                      ++|||++|+..-|     + -..+..++++|++.  |+++.++.++.............++ ..+.+..    .......
T Consensus        26 ~~~kI~~v~Gtr~-----~-~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~v~~~~~~~~~~~   99 (403)
T 3ot5_A           26 AKIKVMSIFGTRP-----E-AIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKKGQTLAEIT   99 (403)
T ss_dssp             CCEEEEEEECSHH-----H-HHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEECCCCC-CCCHHHHH
T ss_pred             ccceEEEEEecCh-----h-HHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccccCCCCCCHHHHH
Confidence            4589999986433     2 24458899999987  6888777665331110000111111 0111111    0111122


Q ss_pred             hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccc-cchHHHHHHHHhhcCcE
Q 009759          190 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWL-VKPMWLVIKFLHRAADL  268 (526)
Q Consensus       190 ~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ad~  268 (526)
                      ......+.+++++++||+|++++.....+.+.+.++..++|++. ++.....      ..+. ........+.+.+.+|.
T Consensus       100 ~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs------~~~~~~~p~~~~r~~~~~~a~~  172 (403)
T 3ot5_A          100 SRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRT------WNKYSPFPEEMNRQLTGVMADI  172 (403)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCC------SCTTSSTTHHHHHHHHHHHCSE
T ss_pred             HHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccc------cccccCCcHHHHHHHHHHhcCE
Confidence            34566788899999999999998766666666778889999763 3321100      0110 00111233445567999


Q ss_pred             EEeCChhHHHHHHHhcccCCCcEEEeecC-CCCCCCCCCc-ccHHHHHhhcCCCCCCcEEEEEecccc-cccHHHHHHHH
Q 009759          269 TLVPSVAIGKDLEAARVTAANKIRIWKKG-VDSESFHPRF-RSSEMRWRLSNGEPDKPLIVHVGRLGV-EKSLDFLKRVM  345 (526)
Q Consensus       269 ii~~S~~~~~~l~~~~~~~~~ki~vi~ng-id~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~vG~l~~-~Kg~~~li~a~  345 (526)
                      +++.++..++.+.+.+. +.+++.+++|. +|...+.+.. .....+.++   .+++.++++.||... .|+++.+++++
T Consensus       173 ~~~~se~~~~~l~~~Gi-~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---~~~~~vlv~~~r~~~~~~~l~~ll~a~  248 (403)
T 3ot5_A          173 HFSPTKQAKENLLAEGK-DPATIFVTGNTAIDALKTTVQKDYHHPILENL---GDNRLILMTAHRRENLGEPMQGMFEAV  248 (403)
T ss_dssp             EEESSHHHHHHHHHTTC-CGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---TTCEEEEECCCCHHHHTTHHHHHHHHH
T ss_pred             EECCCHHHHHHHHHcCC-CcccEEEeCCchHHHHHhhhhhhcchHHHHhc---cCCCEEEEEeCcccccCcHHHHHHHHH
Confidence            99999999999998764 66889999885 4433221111 112233332   233445566666533 47788888888


Q ss_pred             HhC----CCcEEEEE-eCCc-cHHHHHHHhc-CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcE
Q 009759          346 DRL----PEARIAFI-GDGP-YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPV  418 (526)
Q Consensus       346 ~~l----~~~~l~iv-G~g~-~~~~l~~l~~-~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~Pv  418 (526)
                      ..+    +++++++. |.++ ..+.+++... ..+|.+.|++++.++..+|+.||++|.+|     |...+||+++|+|+
T Consensus       249 ~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~Pv  323 (403)
T 3ot5_A          249 REIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPV  323 (403)
T ss_dssp             HHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCE
T ss_pred             HHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCE
Confidence            765    78888887 4443 3455555433 24799999999889999999999999887     45558999999999


Q ss_pred             EEe-CCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 009759          419 VGV-RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI  487 (526)
Q Consensus       419 I~~-~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~  487 (526)
                      |+. +.++.++.+   +.| +|+++.. |++++++++.++++|++.+++|++++..+....+++.+++.+
T Consensus       324 V~~~~~~~~~e~v---~~g-~~~lv~~-d~~~l~~ai~~ll~~~~~~~~m~~~~~~~g~~~aa~rI~~~l  388 (403)
T 3ot5_A          324 LVLRDTTERPEGI---EAG-TLKLIGT-NKENLIKEALDLLDNKESHDKMAQAANPYGDGFAANRILAAI  388 (403)
T ss_dssp             EECCSSCSCHHHH---HHT-SEEECCS-CHHHHHHHHHHHHHCHHHHHHHHHSCCTTCCSCHHHHHHHHH
T ss_pred             EEecCCCcchhhe---eCC-cEEEcCC-CHHHHHHHHHHHHcCHHHHHHHHhhcCcccCCcHHHHHHHHH
Confidence            998 678888877   555 7888765 999999999999999999998876544332333444444333

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.91  E-value=2.2e-23  Score=211.36  Aligned_cols=341  Identities=12%  Similarity=0.065  Sum_probs=213.8

Q ss_pred             CCCCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc--ccCceeccccc-------------
Q 009759          113 ENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE--FYGAKLIGSRS-------------  177 (526)
Q Consensus       113 ~~~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~--~~~~~~~~~~~-------------  177 (526)
                      +....+|||++++.     ..+|....+..++++|+++||+|++++.... ...  ..+.....+..             
T Consensus        15 ~~~~~~MrIl~~~~-----~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   88 (412)
T 3otg_A           15 HIEGRHMRVLFASL-----GTHGHTYPLLPLATAARAAGHEVTFATGEGF-AGTLRKLGFEPVATGMPVFDGFLAALRIR   88 (412)
T ss_dssp             ---CCSCEEEEECC-----SSHHHHGGGHHHHHHHHHTTCEEEEEECGGG-HHHHHHTTCEEEECCCCHHHHHHHHHHHH
T ss_pred             CcccceeEEEEEcC-----CCcccHHHHHHHHHHHHHCCCEEEEEccHHH-HHHHHhcCCceeecCcccccchhhhhhhh
Confidence            34667799999973     2467777889999999999999999987531 110  01222222111             


Q ss_pred             cC---------CCccccccchhc------ccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccc
Q 009759          178 FP---------CPWYQKVPLSLA------LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVY  242 (526)
Q Consensus       178 ~~---------~~~~~~~~~~~~------~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~  242 (526)
                      ..         ..........+.      ....+.+++++++||+|+++.....   +.++++..++|+|++.|+.....
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~---~~~aa~~~giP~v~~~~~~~~~~  165 (412)
T 3otg_A           89 FDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYG---AGLAALKAGIPTICHGVGRDTPD  165 (412)
T ss_dssp             HSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHH---HHHHHHHHTCCEEEECCSCCCCS
T ss_pred             hcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhH---HHHHHHHcCCCEEEecccccCch
Confidence            00         000000011111      1267788889999999999854322   44667889999999888754211


Q ss_pred             ccccccccccchHHHHHHHH------------hhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccH
Q 009759          243 IPRYTFSWLVKPMWLVIKFL------------HRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSS  310 (526)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~------------~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~  310 (526)
                      .      ........+.+..            ...+|.+++.++...+........  ....+.+.+.+.....+     
T Consensus       166 ~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----  232 (412)
T 3otg_A          166 D------LTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARP--RRHELRPVPFAEQGDLP-----  232 (412)
T ss_dssp             H------HHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCT--TEEECCCCCCCCCCCCC-----
T ss_pred             h------hhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCC--CcceeeccCCCCCCCCC-----
Confidence            0      0011111112111            235778888887666555432211  11111111111110000     


Q ss_pred             HHHHhh--cCCCCCCcEEEEEecccccccHHHHHHHHHhC--CCcEEEEEeCCcc-HHHHHHHhcCCCeEEecccChhhH
Q 009759          311 EMRWRL--SNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPY-REELEKMFTGMPAVFTGMLLGEEL  385 (526)
Q Consensus       311 ~~~~~~--~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l--~~~~l~ivG~g~~-~~~l~~l~~~~~V~~~g~v~~~~l  385 (526)
                          .+  ....++..++++.|++. .++.+.+.++++.+  .++++++++.+.. .+.++.+  ..+|.+.|++   ++
T Consensus       233 ----~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~--~~~v~~~~~~---~~  302 (412)
T 3otg_A          233 ----AWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEV--PANVRLESWV---PQ  302 (412)
T ss_dssp             ----GGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCC--CTTEEEESCC---CH
T ss_pred             ----CccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhccC--CCcEEEeCCC---CH
Confidence                01  11133455677888885 56655555544433  2677776664432 3333322  2379999999   48


Q ss_pred             HHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCCC--CHHHHHHHHHHhhh
Q 009759          386 SQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLY  459 (526)
Q Consensus       386 ~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~  459 (526)
                      .++|+.||++|.++    .+++++|||++|+|+|+.+.++    ..+.+   .+...|++++.+  |+++++++|.++++
T Consensus       303 ~~~l~~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v---~~~g~g~~~~~~~~~~~~l~~ai~~ll~  375 (412)
T 3otg_A          303 AALLPHVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAV---AQAGAGDHLLPDNISPDSVSGAAKRLLA  375 (412)
T ss_dssp             HHHGGGCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECCGGGCCHHHHHHHHHHHHH
T ss_pred             HHHHhcCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHH---HHcCCEEecCcccCCHHHHHHHHHHHHh
Confidence            89999999999664    3589999999999999987764    45666   667789999876  89999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 009759          460 NQELRETMGQAARQEMEKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       460 d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~  493 (526)
                      |++.++++++.+++..+.++++.+++.++ +++.
T Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~  408 (412)
T 3otg_A          376 EESYRAGARAVAAEIAAMPGPDEVVRLLP-GFAS  408 (412)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCHHHHHTTHH-HHHC
T ss_pred             CHHHHHHHHHHHHHHhcCCCHHHHHHHHH-HHhc
Confidence            99999999999999888899999999886 6654

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.91  E-value=2.5e-22  Score=199.54  Aligned_cols=325  Identities=17%  Similarity=0.132  Sum_probs=209.9

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc---cCceeccccccCCCc---cccc---cc
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF---YGAKLIGSRSFPCPW---YQKV---PL  188 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~---~~  188 (526)
                      +.||+|...     ..||+-.....++++|+++||+|.+++...+.....   .+.....+.....+.   ....   ..
T Consensus         2 ~~~i~i~~G-----GTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~   76 (365)
T 3s2u_A            2 KGNVLIMAG-----GTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLE   76 (365)
T ss_dssp             -CEEEEECC-----SSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHH
T ss_pred             CCcEEEEcC-----CCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHH
Confidence            358876642     246777778999999999999999998765432211   122221111111110   0000   11


Q ss_pred             hhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcE
Q 009759          189 SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADL  268 (526)
Q Consensus       189 ~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~  268 (526)
                      .+.......+++++++||+|+...... .....++++..++|++++..+..+.               ...+.+.+.++.
T Consensus        77 ~~~~~~~~~~~l~~~~PDvVi~~g~~~-s~p~~laA~~~~iP~vihe~n~~~G---------------~~nr~l~~~a~~  140 (365)
T 3s2u_A           77 LLKSLFQALRVIRQLRPVCVLGLGGYV-TGPGGLAARLNGVPLVIHEQNAVAG---------------TANRSLAPIARR  140 (365)
T ss_dssp             HHHHHHHHHHHHHHHCCSEEEECSSST-HHHHHHHHHHTTCCEEEEECSSSCC---------------HHHHHHGGGCSE
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEcCCcc-hHHHHHHHHHcCCCEEEEecchhhh---------------hHHHhhccccce
Confidence            122334567788999999999987543 3445667889999999765554321               224567788999


Q ss_pred             EEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCc-EEEEEecccccccHHHHHHHHHh
Q 009759          269 TLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKP-LIVHVGRLGVEKSLDFLKRVMDR  347 (526)
Q Consensus       269 ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~vG~l~~~Kg~~~li~a~~~  347 (526)
                      +++..+..       +. ...++.++.|++..+.+......      ... ..+++ ++++.|++...+..+.+.+++..
T Consensus       141 v~~~~~~~-------~~-~~~k~~~~g~pvr~~~~~~~~~~------~~~-~~~~~~ilv~gGs~g~~~~~~~~~~al~~  205 (365)
T 3s2u_A          141 VCEAFPDT-------FP-ASDKRLTTGNPVRGELFLDAHAR------APL-TGRRVNLLVLGGSLGAEPLNKLLPEALAQ  205 (365)
T ss_dssp             EEESSTTS-------SC-C---CEECCCCCCGGGCCCTTSS------CCC-TTSCCEEEECCTTTTCSHHHHHHHHHHHT
T ss_pred             eeeccccc-------cc-CcCcEEEECCCCchhhccchhhh------ccc-CCCCcEEEEECCcCCccccchhhHHHHHh
Confidence            88766532       11 34677788888877655433211      111 23444 45566778888888899999988


Q ss_pred             CC---CcEEEE-EeCCccHHHHHHHhcC--CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          348 LP---EARIAF-IGDGPYREELEKMFTG--MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       348 l~---~~~l~i-vG~g~~~~~l~~l~~~--~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                      ++   ++++++ +|.+. .+.+.+...+  .++.+.+++  +++.++|+.||++|.-+    .++++.|+|++|+|+|..
T Consensus       206 l~~~~~~~vi~~~G~~~-~~~~~~~~~~~~~~~~v~~f~--~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ili  278 (365)
T 3s2u_A          206 VPLEIRPAIRHQAGRQH-AEITAERYRTVAVEADVAPFI--SDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLV  278 (365)
T ss_dssp             SCTTTCCEEEEECCTTT-HHHHHHHHHHTTCCCEEESCC--SCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEEC
T ss_pred             cccccceEEEEecCccc-cccccceecccccccccccch--hhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEe
Confidence            84   344443 45443 3444443332  378999999  68999999999999543    378999999999999987


Q ss_pred             CCCCC--------CceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          422 RAGGI--------PDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       422 ~~gg~--------~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      +.+..        .+.+   .+...|++++..  ++++|+++|.++++|++.+++|++++++..+....+.+++.++
T Consensus       279 p~p~~~~~~Q~~NA~~l---~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~~~aa~~ia~~i~  352 (365)
T 3s2u_A          279 PLPHAIDDHQTRNAEFL---VRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACL  352 (365)
T ss_dssp             C-----CCHHHHHHHHH---HTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred             ccCCCCCcHHHHHHHHH---HHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence            76532        1234   455678877654  5899999999999999999999999988766556666666554

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.88  E-value=8.8e-22  Score=200.73  Aligned_cols=346  Identities=15%  Similarity=0.078  Sum_probs=209.5

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-cccCceecccccc-CCCcc------cccc--
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-EFYGAKLIGSRSF-PCPWY------QKVP--  187 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~~~~~~~~~~~~~-~~~~~------~~~~--  187 (526)
                      .|||++++.     ..+|+...+..++++|+++||+|++++....... ...+.....+... +....      ....  
T Consensus         7 m~kIl~~~~-----~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (430)
T 2iyf_A            7 PAHIAMFSI-----AAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLDN   81 (430)
T ss_dssp             -CEEEEECC-----SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHHH
T ss_pred             cceEEEEeC-----CCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCccccccccccchhhHHH
Confidence            379998742     2367777889999999999999999987542110 0112222222111 00000      0000  


Q ss_pred             ------chhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccc-ccc-c------------c
Q 009759          188 ------LSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVY-IPR-Y------------T  247 (526)
Q Consensus       188 ------~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-~~~-~------------~  247 (526)
                            ........+.+.+++++||+|+++....   .+..+++..++|++...++..... ... .            .
T Consensus        82 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~---~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (430)
T 2iyf_A           82 VEPFLNDAIQALPQLADAYADDIPDLVLHDITSY---PARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQTER  158 (430)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCH---HHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHHHHHSHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCEEEECCccH---HHHHHHHHcCCCEEEEecccccccccccccccchhhhhccchH
Confidence                  0112234566777888999999875432   345667888999998886643110 000 0            0


Q ss_pred             cccccchHHHHHHH---------HhhcCcEEEeCChhHHHHHHHhcccCCCc-EEEeecCCCCCCCCCCcccHHHHHhhc
Q 009759          248 FSWLVKPMWLVIKF---------LHRAADLTLVPSVAIGKDLEAARVTAANK-IRIWKKGVDSESFHPRFRSSEMRWRLS  317 (526)
Q Consensus       248 ~~~~~~~~~~~~~~---------~~~~ad~ii~~S~~~~~~l~~~~~~~~~k-i~vi~ngid~~~~~~~~~~~~~~~~~~  317 (526)
                      ..+.......+...         ++..+|.+++.+....+......  + .+ +..+.++++.....+.         +.
T Consensus       159 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~-~~~v~~vG~~~~~~~~~~~---------~~  226 (430)
T 2iyf_A          159 GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRV--D-EDVYTFVGACQGDRAEEGG---------WQ  226 (430)
T ss_dssp             HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGS--C-TTTEEECCCCC-----CCC---------CC
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccC--C-CccEEEeCCcCCCCCCCCC---------Cc
Confidence            00000001111111         22247888888765543321111  2 34 7777665543210000         00


Q ss_pred             C-CCCCCcEEEEEeccccccc---HHHHHHHHHhCCCcEE-EEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcC
Q 009759          318 N-GEPDKPLIVHVGRLGVEKS---LDFLKRVMDRLPEARI-AFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASG  392 (526)
Q Consensus       318 ~-~~~~~~~i~~vG~l~~~Kg---~~~li~a~~~l~~~~l-~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~a  392 (526)
                      . ..++..+++++|++. .++   +..++++++.++++++ +++|.+...+.++.+  ..+|.+.|++++.   ++|+.|
T Consensus       227 ~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~--~~~v~~~~~~~~~---~~l~~a  300 (430)
T 2iyf_A          227 RPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGEL--PDNVEVHDWVPQL---AILRQA  300 (430)
T ss_dssp             CCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCSC--CTTEEEESSCCHH---HHHTTC
T ss_pred             cccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccC--CCCeEEEecCCHH---HHhhcc
Confidence            0 123456788899987 433   5556666666567787 567877654443221  2379999999743   789999


Q ss_pred             cEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHH
Q 009759          393 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRET  466 (526)
Q Consensus       393 Dv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~  466 (526)
                      |++|..+    ..++++|||++|+|+|+.+.++    ..+.+   .+.+.|+.++.+  |+++++++|.++++|++.+++
T Consensus       301 d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~  373 (430)
T 2iyf_A          301 DLFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNADML---QGLGVARKLATEEATADLLRETALALVDDPEVARR  373 (430)
T ss_dssp             SEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHH---HHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHH
T ss_pred             CEEEECC----CccHHHHHHHhCCCEEECCCccchHHHHHHH---HHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHH
Confidence            9999754    2479999999999999998764    34455   556789988866  899999999999999999999


Q ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Q 009759          467 MGQAARQEMEKYDWRAATRTIRNEQYNAAIW  497 (526)
Q Consensus       467 ~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~  497 (526)
                      +++.+++..+.++++.+++.++ +++++...
T Consensus       374 ~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~  403 (430)
T 2iyf_A          374 LRRIQAEMAQEGGTRRAADLIE-AELPARHE  403 (430)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHH-TTSCC---
T ss_pred             HHHHHHHHHhcCcHHHHHHHHH-HHhhcccc
Confidence            9999988887889999998886 67665543

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.86  E-value=2.7e-21  Score=195.06  Aligned_cols=336  Identities=14%  Similarity=0.098  Sum_probs=190.3

Q ss_pred             CCCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-cccCceecccccc--------------
Q 009759          114 NNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-EFYGAKLIGSRSF--------------  178 (526)
Q Consensus       114 ~~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~~~~~~~~~~~~~--------------  178 (526)
                      .....|||++++..     ..|....+..++++|+++||+|++++....... ...+.....+...              
T Consensus        11 ~~~~~MrIl~~~~~-----~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~   85 (398)
T 4fzr_A           11 PRGSHMRILVIAGC-----SEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGN   85 (398)
T ss_dssp             ----CCEEEEECCS-----SHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSC
T ss_pred             CCCCceEEEEEcCC-----CcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCc
Confidence            45667999999752     357777789999999999999999987431100 0011111111100              


Q ss_pred             CCCcc-cc---c--------cchhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccccccc
Q 009759          179 PCPWY-QK---V--------PLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRY  246 (526)
Q Consensus       179 ~~~~~-~~---~--------~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~  246 (526)
                      ..... ..   .        .........+.+++++++||+|+++...   +.+.++++..++|++...|+.....  ..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~---~~~~~~a~~~giP~v~~~~~~~~~~--~~  160 (398)
T 4fzr_A           86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYS---LTGPLVAATLGIPWIEQSIRLASPE--LI  160 (398)
T ss_dssp             BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTC---THHHHHHHHHTCCEEEECCSSCCCH--HH
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccc---cHHHHHHHhhCCCEEEeccCCCCch--hh
Confidence            00000 00   0        0001223367778888999999987532   2345567889999998888753211  00


Q ss_pred             ccccccchHHHHHHHHhh-------cCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCC
Q 009759          247 TFSWLVKPMWLVIKFLHR-------AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNG  319 (526)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~-------~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~  319 (526)
                          .......+...+.+       ..+..+...+..........   ...+..++...      ........   +...
T Consensus       161 ----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~---~~~~  224 (398)
T 4fzr_A          161 ----KSAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQPKPG---TTKMRYVPYNG------RNDQVPSW---VFEE  224 (398)
T ss_dssp             ----HHHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----CC---CEECCCCCCCC------SSCCCCHH---HHSC
T ss_pred             ----hHHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCCCCC---CCCeeeeCCCC------CCCCCchh---hhcC
Confidence                00000111111111       12344443332221111110   00111111100      00000111   1111


Q ss_pred             CCCCcEEEEEecccc----------cccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHH
Q 009759          320 EPDKPLIVHVGRLGV----------EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAY  389 (526)
Q Consensus       320 ~~~~~~i~~vG~l~~----------~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~  389 (526)
                      ...+.+++++|++..          .+.++.+++++..+ +++++++|.+...+.+..+  ..+|++.|+++   +.++|
T Consensus       225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~l~~~--~~~v~~~~~~~---~~~ll  298 (398)
T 4fzr_A          225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-GFEVVVAVSDKLAQTLQPL--PEGVLAAGQFP---LSAIM  298 (398)
T ss_dssp             CSSCEEECC----------------CCSHHHHHHHGGGG-TCEEEECCCC--------C--CTTEEEESCCC---HHHHG
T ss_pred             CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-CCEEEEEeCCcchhhhccC--CCcEEEeCcCC---HHHHH
Confidence            234566778899854          45588888888877 7899988877655544433  34899999984   77889


Q ss_pred             HcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC----CCCceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHH
Q 009759          390 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQEL  463 (526)
Q Consensus       390 ~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g----g~~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~  463 (526)
                      ..||++|.    .+.+++++|||++|+|+|+...+    +..+.+   ++.+.|++++.+  ++++++++|.++++|++.
T Consensus       299 ~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~  371 (398)
T 4fzr_A          299 PACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL---HAAGAGVEVPWEQAGVESVLAACARIRDDSSY  371 (398)
T ss_dssp             GGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH---HHTTSEEECC-------CHHHHHHHHHHCTHH
T ss_pred             hhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHH---HHcCCEEecCcccCCHHHHHHHHHHHHhCHHH
Confidence            99999994    45578999999999999996554    455566   667889998876  789999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          464 RETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       464 ~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      ++++++.+++..+..+++.+++.+.
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~l~  396 (398)
T 4fzr_A          372 VGNARRLAAEMATLPTPADIVRLIE  396 (398)
T ss_dssp             HHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHHh
Confidence            9999999988888899999988764

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.84  E-value=8.6e-20  Score=184.18  Aligned_cols=343  Identities=14%  Similarity=0.078  Sum_probs=204.6

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-cccCceecccccc-CC------Ccccc-----
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-EFYGAKLIGSRSF-PC------PWYQK-----  185 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~~~~~~~~~~~~~-~~------~~~~~-----  185 (526)
                      |||++++.    + ..|+-..+..++++|+++||+|++++....... ...+.....+... +.      .....     
T Consensus         5 ~~il~~~~----~-~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (402)
T 3ia7_A            5 RHILFANV----Q-GHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQL   79 (402)
T ss_dssp             CEEEEECC----S-SHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHH
T ss_pred             CEEEEEeC----C-CCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEecccccccccccccccccchHHHH
Confidence            39998864    2 357888899999999999999999986321000 0111222111100 00      00000     


Q ss_pred             ----ccchhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccccccc---------c-cc-c
Q 009759          186 ----VPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRY---------T-FS-W  250 (526)
Q Consensus       186 ----~~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---------~-~~-~  250 (526)
                          ..........+.+.+++++||+|++++.  ....+..+++..++|++...|+.........         . .. .
T Consensus        80 ~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~--~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (402)
T 3ia7_A           80 HLVYVRENVAILRAAEEALGDNPPDLVVYDVF--PFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPAD  157 (402)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSEEEEEST--THHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHTCCCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCEEEECch--HHHHHHHHHHhhCCCEEEEecccccCccccccccccccccccChhh
Confidence                0001122346677788899999999742  2233556678899999998876543211000         0 00 0


Q ss_pred             ccchHHHHHHH------------HhhcC-cEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhc
Q 009759          251 LVKPMWLVIKF------------LHRAA-DLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLS  317 (526)
Q Consensus       251 ~~~~~~~~~~~------------~~~~a-d~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~  317 (526)
                      .......+.+.            +.... |..++......+......   ..++..+.+.+......+....        
T Consensus       158 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~~~~~~~~~~~~~--------  226 (402)
T 3ia7_A          158 VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETF---DERFAFVGPTLTGRDGQPGWQP--------  226 (402)
T ss_dssp             SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGC---CTTEEECCCCCCC----CCCCC--------
T ss_pred             HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccC---CCCeEEeCCCCCCcccCCCCcc--------
Confidence            00001111111            11111 555555544433322221   2345555433321110000000        


Q ss_pred             CCCCCCcEEEEEecccccc--cHHHHHHHHHhCCCcEEEE-EeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcE
Q 009759          318 NGEPDKPLIVHVGRLGVEK--SLDFLKRVMDRLPEARIAF-IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDV  394 (526)
Q Consensus       318 ~~~~~~~~i~~vG~l~~~K--g~~~li~a~~~l~~~~l~i-vG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv  394 (526)
                      .......++++.|+....+  .+..+++++..++ +++++ +|.+...+.++.+  ..+|++.|++++.   ++|+.||+
T Consensus       227 ~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~--~~~v~~~~~~~~~---~ll~~ad~  300 (402)
T 3ia7_A          227 PRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTP-WHVVMAIGGFLDPAVLGPL--PPNVEAHQWIPFH---SVLAHARA  300 (402)
T ss_dssp             SSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSS-CEEEEECCTTSCGGGGCSC--CTTEEEESCCCHH---HHHTTEEE
T ss_pred             cCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCC-cEEEEEeCCcCChhhhCCC--CCcEEEecCCCHH---HHHhhCCE
Confidence            0133456678889886665  5677778877775 66555 6665444333321  2389999999643   89999999


Q ss_pred             EEecCCCCCCcHHHHHHHHcCCcEEEeCC-C----CCCceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHHH
Q 009759          395 FVMPSESETLGLVVLEAMSSGIPVVGVRA-G----GIPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETM  467 (526)
Q Consensus       395 ~v~ps~~e~~~~~ilEAma~G~PvI~~~~-g----g~~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~~  467 (526)
                      +|..+    ..++++|||++|+|+|+... .    +..+.+   .+.+.|..+..+  ++++++++|.++++|++.++++
T Consensus       301 ~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~  373 (402)
T 3ia7_A          301 CLTHG----TTGAVLEAFAAGVPLVLVPHFATEAAPSAERV---IELGLGSVLRPDQLEPASIREAVERLAADSAVRERV  373 (402)
T ss_dssp             EEECC----CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHH---HHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHH
T ss_pred             EEECC----CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHH---HHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHH
Confidence            99654    35789999999999997655 3    444555   566788888765  8999999999999999999999


Q ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHH
Q 009759          468 GQAARQEMEKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       468 ~~~a~~~~~~fs~~~~~~~~~~~ly~  493 (526)
                      ++.+++..+..+++.+++.+. +++.
T Consensus       374 ~~~~~~~~~~~~~~~~~~~i~-~~~~  398 (402)
T 3ia7_A          374 RRMQRDILSSGGPARAADEVE-AYLG  398 (402)
T ss_dssp             HHHHHHHHTSCHHHHHHHHHH-HHHH
T ss_pred             HHHHHHHhhCChHHHHHHHHH-HHHh
Confidence            888888777889998888886 5554

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.83  E-value=5.5e-20  Score=185.44  Aligned_cols=333  Identities=15%  Similarity=0.097  Sum_probs=198.5

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc--ccCceecccccc--------------
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE--FYGAKLIGSRSF--------------  178 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~--~~~~~~~~~~~~--------------  178 (526)
                      ..+.|||+|++..     .+|....+..++++|+++||+|++++. . ....  ..+.....+...              
T Consensus        17 ~~~~MrIl~~~~~-----~~Ghv~~~~~La~~L~~~GheV~v~~~-~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~   89 (398)
T 3oti_A           17 EGRHMRVLFVSSP-----GIGHLFPLIQLAWGFRTAGHDVLIAVA-E-HADRAAAAGLEVVDVAPDYSAVKVFEQVAKDN   89 (398)
T ss_dssp             --CCCEEEEECCS-----SHHHHGGGHHHHHHHHHTTCEEEEEES-S-CHHHHHTTTCEEEESSTTCCHHHHHHHHHHHC
T ss_pred             hhhcCEEEEEcCC-----CcchHhHHHHHHHHHHHCCCEEEEecc-c-hHHHHHhCCCeeEecCCccCHHHHhhhcccCC
Confidence            4556999999752     357777889999999999999999997 2 1111  122222211100              


Q ss_pred             ----------CCCcccc-----ccchhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccc
Q 009759          179 ----------PCPWYQK-----VPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI  243 (526)
Q Consensus       179 ----------~~~~~~~-----~~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~  243 (526)
                                +......     ..........+.+++++++||+|++....   +.+.++++..++|++...++......
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~---~~~~~aA~~~giP~v~~~~~~~~~~~  166 (398)
T 3oti_A           90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGA---TVGLLAADRAGVPAVQRNQSAWRTRG  166 (398)
T ss_dssp             HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTC---HHHHHHHHHHTCCEEEECCTTCCCTT
T ss_pred             ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchh---hHHHHHHHHcCCCEEEEeccCCCccc
Confidence                      0000000     00112334578888899999999985332   33456778899999987766422110


Q ss_pred             cccccccccchHHHHHHHHh--hcCcEEEeCChhHHHHHHHhcccCCCcEEEee-cCCCCCCCCCCcccHHHHHhhcCCC
Q 009759          244 PRYTFSWLVKPMWLVIKFLH--RAADLTLVPSVAIGKDLEAARVTAANKIRIWK-KGVDSESFHPRFRSSEMRWRLSNGE  320 (526)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~--~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~-ngid~~~~~~~~~~~~~~~~~~~~~  320 (526)
                        ..............+..+  ...+..+...+.........   ....+..++ ++-..  . +.        .+....
T Consensus       167 --~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~-~~--------~~~~~~  230 (398)
T 3oti_A          167 --MHRSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLEAEP---EGWFMRWVPYGGGAV--L-GD--------RLPPVP  230 (398)
T ss_dssp             --HHHHHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTTSCC---CSBCCCCCCCCCCEE--C-CS--------SCCCCC
T ss_pred             --hhhHHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCCCC---CCCCccccCCCCCcC--C-ch--------hhhcCC
Confidence              000000000111111111  12244554443322111000   011111222 11100  0 00        000012


Q ss_pred             CCCcEEEEEecccc----cccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEE
Q 009759          321 PDKPLIVHVGRLGV----EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV  396 (526)
Q Consensus       321 ~~~~~i~~vG~l~~----~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v  396 (526)
                      +.+.+++++|++..    .+.+..+++++... +++++++|++...+.++.+  ..||.+.|++   ++.++|..||++|
T Consensus       231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~-~~~~v~~~g~~~~~~l~~~--~~~v~~~~~~---~~~~ll~~ad~~v  304 (398)
T 3oti_A          231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV-DADFVLALGDLDISPLGTL--PRNVRAVGWT---PLHTLLRTCTAVV  304 (398)
T ss_dssp             SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS-SSEEEEECTTSCCGGGCSC--CTTEEEESSC---CHHHHHTTCSEEE
T ss_pred             CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC-CCEEEEEECCcChhhhccC--CCcEEEEccC---CHHHHHhhCCEEE
Confidence            34566778899843    34567777777776 7899998876544333322  2389999999   4667899999999


Q ss_pred             ecCCCCCCcHHHHHHHHcCCcEEEe----CCCCCC--ceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHHHH
Q 009759          397 MPSESETLGLVVLEAMSSGIPVVGV----RAGGIP--DIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMG  468 (526)
Q Consensus       397 ~ps~~e~~~~~ilEAma~G~PvI~~----~~gg~~--e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~~~  468 (526)
                      .    .+.+++++|||++|+|+|+.    +..+..  +.+   ++...|+.++..  +++.++    ++++|++.+++++
T Consensus       305 ~----~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~---~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~  373 (398)
T 3oti_A          305 H----HGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV---SRRGIGLVSTSDKVDADLLR----RLIGDESLRTAAR  373 (398)
T ss_dssp             E----CCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH---HHHTSEEECCGGGCCHHHHH----HHHHCHHHHHHHH
T ss_pred             E----CCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH---HHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHH
Confidence            4    45568999999999999994    445666  777   667889988765  556555    7889999999999


Q ss_pred             HHHHHHHHhCCHHHHHHHHHHHH
Q 009759          469 QAARQEMEKYDWRAATRTIRNEQ  491 (526)
Q Consensus       469 ~~a~~~~~~fs~~~~~~~~~~~l  491 (526)
                      +.+++..+..+++.+++.++ ++
T Consensus       374 ~~~~~~~~~~~~~~~~~~l~-~l  395 (398)
T 3oti_A          374 EVREEMVALPTPAETVRRIV-ER  395 (398)
T ss_dssp             HHHHHHHTSCCHHHHHHHHH-HH
T ss_pred             HHHHHHHhCCCHHHHHHHHH-HH
Confidence            99988888899999998885 44

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.83  E-value=1.9e-20  Score=188.37  Aligned_cols=335  Identities=12%  Similarity=0.060  Sum_probs=199.1

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCC-ccccCceeccc-ccc---CCCcc---------
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVP-QEFYGAKLIGS-RSF---PCPWY---------  183 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~-~~~~~~~~~~~-~~~---~~~~~---------  183 (526)
                      +|||++++..     ..|+...+..++++|+++||+|++++...... ....+.....+ ...   .....         
T Consensus         1 ~MrIl~~~~~-----~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (391)
T 3tsa_A            1 HMRVLVVPLP-----YPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPA   75 (391)
T ss_dssp             CCEEEEECCS-----CHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGG
T ss_pred             CcEEEEEcCC-----CcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhcccccccc
Confidence            4999999752     36777778999999999999999998532100 00011222111 000   00000         


Q ss_pred             ------cc-----ccchhcc-------cHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccc
Q 009759          184 ------QK-----VPLSLAL-------SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPR  245 (526)
Q Consensus       184 ------~~-----~~~~~~~-------~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~  245 (526)
                            ..     .......       ...+.+++++++||+|+++...   +.+.++++..++|++...|+....... 
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~---~~~~~aa~~~giP~v~~~~~~~~~~~~-  151 (391)
T 3tsa_A           76 FGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCA---LIGRVLGGLLDLPVVLHRWGVDPTAGP-  151 (391)
T ss_dssp             GGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTC---HHHHHHHHHTTCCEEEECCSCCCTTTH-
T ss_pred             cccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcch---hHHHHHHHHhCCCEEEEecCCcccccc-
Confidence                  00     0000111       4566788889999999997532   334557788999999887775321110 


Q ss_pred             cccccccchH-HHHHHHHhh---cCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCC
Q 009759          246 YTFSWLVKPM-WLVIKFLHR---AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEP  321 (526)
Q Consensus       246 ~~~~~~~~~~-~~~~~~~~~---~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~  321 (526)
                       ......... ....+..+.   ..+.++.......+.......   ..+..++  .     .......   ........
T Consensus       152 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p--~-----~~~~~~~---~~~~~~~~  217 (391)
T 3tsa_A          152 -FSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQG---APVQYVP--Y-----NGSGAFP---AWGAARTS  217 (391)
T ss_dssp             -HHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTTSCCC---EECCCCC--C-----CCCEECC---GGGSSCCS
T ss_pred             -ccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCCCCCcc---CCeeeec--C-----CCCcCCC---chhhcCCC
Confidence             000000000 011111111   115555554433221111000   0111111  0     0000000   00111123


Q ss_pred             CCcEEEEEecccccc-c----HHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEE
Q 009759          322 DKPLIVHVGRLGVEK-S----LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV  396 (526)
Q Consensus       322 ~~~~i~~vG~l~~~K-g----~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v  396 (526)
                      ++.++++.|+....+ +    ++.++++ +.+|+++++++|.+...+.+..+  ..+|++.|+++..+   ++..||++|
T Consensus       218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~--~~~v~~~~~~~~~~---ll~~ad~~v  291 (391)
T 3tsa_A          218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDL--PDNARIAESVPLNL---FLRTCELVI  291 (391)
T ss_dssp             SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTC--CTTEEECCSCCGGG---TGGGCSEEE
T ss_pred             CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccC--CCCEEEeccCCHHH---HHhhCCEEE
Confidence            345567778885532 2    5666777 77789999999877544433321  23899999996544   569999999


Q ss_pred             ecCCCCCCcHHHHHHHHcCCcEEEeCCC----CCCceecccCCCceeEeeCC----CCHHHHHHHHHHhhhCHHHHHHHH
Q 009759          397 MPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNP----GDLDDCLSKLEPLLYNQELRETMG  468 (526)
Q Consensus       397 ~ps~~e~~~~~ilEAma~G~PvI~~~~g----g~~e~v~~~~~~~~g~~~~~----~d~~~la~ai~~ll~d~~~~~~~~  468 (526)
                      .    ++.+++++|||++|+|+|+....    +..+.+   .+...|.+++.    .|+++++++|.++++|++.+++++
T Consensus       292 ~----~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~---~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~  364 (391)
T 3tsa_A          292 C----AGGSGTAFTATRLGIPQLVLPQYFDQFDYARNL---AAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAI  364 (391)
T ss_dssp             E----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH---HHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHH
T ss_pred             e----CCCHHHHHHHHHhCCCEEecCCcccHHHHHHHH---HHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHH
Confidence            4    45567999999999999997553    334455   56778999887    789999999999999999999999


Q ss_pred             HHHHHHHHhCCHHHHHHHHH
Q 009759          469 QAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       469 ~~a~~~~~~fs~~~~~~~~~  488 (526)
                      +.+++..+..+++.+++.++
T Consensus       365 ~~~~~~~~~~~~~~~~~~i~  384 (391)
T 3tsa_A          365 KLSDEITAMPHPAALVRTLE  384 (391)
T ss_dssp             HHHHHHHTSCCHHHHHHHHH
T ss_pred             HHHHHHHcCCCHHHHHHHHH
Confidence            98888888899999988775

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.83  E-value=2.2e-19  Score=182.06  Aligned_cols=346  Identities=12%  Similarity=0.029  Sum_probs=202.8

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-cccCceeccccccCCCccc---------
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-EFYGAKLIGSRSFPCPWYQ---------  184 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------  184 (526)
                      ..+.|||++++.     ...|+-..+..++++|+++||+|++++....... ...+.....+... .+...         
T Consensus        17 ~~~m~rIl~~~~-----~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~   90 (415)
T 3rsc_A           17 GRHMAHLLIVNV-----ASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSE-IIDADAAEVFGSDD   90 (415)
T ss_dssp             --CCCEEEEECC-----SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCS-TTTCCHHHHHHSSS
T ss_pred             cccCCEEEEEeC-----CCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEecccc-ccccccchhhcccc
Confidence            344589998864     2367778899999999999999999995431110 0112222211110 00000         


Q ss_pred             --------cccchhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccccccc---------c
Q 009759          185 --------KVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRY---------T  247 (526)
Q Consensus       185 --------~~~~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---------~  247 (526)
                              ...........+.+.+++++||+|++++.  ..+.+..+++..++|++...++.........         .
T Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~--~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~  168 (415)
T 3rsc_A           91 LGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDF--PFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAGT  168 (415)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEEST--THHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECch--hhhHHHHHHHHhCCCEEEEEecccccCcccccccccccccc
Confidence                    00011122346677788899999998632  2233456678899999998876542110000         0


Q ss_pred             -cc-cccchHHHHHHHH------------hh-cCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHH
Q 009759          248 -FS-WLVKPMWLVIKFL------------HR-AADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEM  312 (526)
Q Consensus       248 -~~-~~~~~~~~~~~~~------------~~-~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~  312 (526)
                       .. ........+....            .. ..|..++......+......   ..++..+.+.+......+..     
T Consensus       169 ~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~~~~~~~~~~~-----  240 (415)
T 3rsc_A          169 IDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTF---DDRFVFVGPCFDDRRFLGEW-----  240 (415)
T ss_dssp             CCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGC---CTTEEECCCCCCCCGGGCCC-----
T ss_pred             CChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccC---CCceEEeCCCCCCcccCcCc-----
Confidence             00 0000001111111            11 11555555544333222211   23444443222111000000     


Q ss_pred             HHhhcCCCCCCcEEEEEecccccc--cHHHHHHHHHhCCCcEEEE-EeCCccHHHHHHHhcCCCeEEecccChhhHHHHH
Q 009759          313 RWRLSNGEPDKPLIVHVGRLGVEK--SLDFLKRVMDRLPEARIAF-IGDGPYREELEKMFTGMPAVFTGMLLGEELSQAY  389 (526)
Q Consensus       313 ~~~~~~~~~~~~~i~~vG~l~~~K--g~~~li~a~~~l~~~~l~i-vG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~  389 (526)
                         .......+.++++.|+.....  .+..+++++..++ +++++ +|.+...+.++.+  ..||++.|++++.   ++|
T Consensus       241 ---~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~-~~~v~~~g~~~~~~~l~~~--~~~v~~~~~~~~~---~ll  311 (415)
T 3rsc_A          241 ---TRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP-WHVVMTLGGQVDPAALGDL--PPNVEAHRWVPHV---KVL  311 (415)
T ss_dssp             ---CCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSS-CEEEEECTTTSCGGGGCCC--CTTEEEESCCCHH---HHH
T ss_pred             ---cccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCC-cEEEEEeCCCCChHHhcCC--CCcEEEEecCCHH---HHH
Confidence               000123455677888875443  3677778887775 77776 6665444333321  2389999999643   889


Q ss_pred             HcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC----CCCceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHH
Q 009759          390 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG----GIPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQEL  463 (526)
Q Consensus       390 ~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g----g~~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~  463 (526)
                      ..||++|..+    ..++++|||++|+|+|+....    ...+.+   .+.+.|..+..+  ++++++++|.++++|++.
T Consensus       312 ~~ad~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~  384 (415)
T 3rsc_A          312 EQATVCVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRV---DQLGLGAVLPGEKADGDTLLAAVGAVAADPAL  384 (415)
T ss_dssp             HHEEEEEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHH---HHHTCEEECCGGGCCHHHHHHHHHHHHTCHHH
T ss_pred             hhCCEEEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHH---HHcCCEEEcccCCCCHHHHHHHHHHHHcCHHH
Confidence            9999999653    357899999999999996543    234455   455678877755  899999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 009759          464 RETMGQAARQEMEKYDWRAATRTIRNEQYN  493 (526)
Q Consensus       464 ~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~  493 (526)
                      ++++.+.+++..+...++.+++.+. +++.
T Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~  413 (415)
T 3rsc_A          385 LARVEAMRGHVRRAGGAARAADAVE-AYLA  413 (415)
T ss_dssp             HHHHHHHHHHHHHSCHHHHHHHHHH-HHHH
T ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHH-HHhh
Confidence            9999888888777888888888775 5543

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.79  E-value=5.6e-18  Score=169.85  Aligned_cols=329  Identities=15%  Similarity=0.108  Sum_probs=197.6

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-cccCceeccccccC-----------CC-cc-c
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-EFYGAKLIGSRSFP-----------CP-WY-Q  184 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~~~~~~~~~~~~~~-----------~~-~~-~  184 (526)
                      |||++++.     ..+|+...+..++++|+++||+|++++....... ...+.....+....           .+ .. .
T Consensus         1 MrIl~~~~-----~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (384)
T 2p6p_A            1 MRILFVAA-----GSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPS   75 (384)
T ss_dssp             CEEEEECC-----SSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCC
T ss_pred             CEEEEEeC-----CccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCCCEEEEeCCcchHHHHhhhcccCccccCc
Confidence            89999853     2368888899999999999999999986531100 00122211111100           00 00 0


Q ss_pred             --ccc----ch------hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccccccccccccc
Q 009759          185 --KVP----LS------LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLV  252 (526)
Q Consensus       185 --~~~----~~------~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~  252 (526)
                        ...    ..      ......+.+.+++++||+|+++....   .+..+++..++|++...|+....  .. ..... 
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~---~~~~~a~~~giP~v~~~~~~~~~--~~-~~~~~-  148 (384)
T 2p6p_A           76 DPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSY---VAPLLALHLGVPHARQTWDAVDA--DG-IHPGA-  148 (384)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCT---HHHHHHHHHTCCEEEECCSSCCC--TT-THHHH-
T ss_pred             chHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchh---hHHHHHHhcCCCEEEeccCCccc--ch-hhHHH-
Confidence              000    00      01234566777888999999976422   34456778899999877653211  00 00000 


Q ss_pred             chHHHHHHHHhhc-------CcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcE
Q 009759          253 KPMWLVIKFLHRA-------ADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPL  325 (526)
Q Consensus       253 ~~~~~~~~~~~~~-------ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (526)
                        .....+...+.       ++.+++.+....+....   .+..++..++  .+     .........   ....+...+
T Consensus       149 --~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~--~~-----~~~~~~~~l---~~~~~~~~v  213 (384)
T 2p6p_A          149 --DAELRPELSELGLERLPAPDLFIDICPPSLRPANA---APARMMRHVA--TS-----RQCPLEPWM---YTRDTRQRV  213 (384)
T ss_dssp             --HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTTS---CCCEECCCCC--CC-----CCCBCCHHH---HCCCSSCEE
T ss_pred             --HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCCC---CCCCceEecC--CC-----CCCCCCchh---hcCCCCCEE
Confidence              00111111111       56777766543221100   0111111111  11     000111111   001233557


Q ss_pred             EEEEeccccc-------ccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEec
Q 009759          326 IVHVGRLGVE-------KSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  398 (526)
Q Consensus       326 i~~vG~l~~~-------Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~p  398 (526)
                      ++++|++...       +.++.+++++..+ ++++++++.+...+.++.+  ..+|.+ |+++.   .++|..||++|..
T Consensus       214 ~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~g~~~~~~l~~~--~~~v~~-~~~~~---~~~l~~~d~~v~~  286 (384)
T 2p6p_A          214 LVTSGSRVAKESYDRNFDFLRGLAKDLVRW-DVELIVAAPDTVAEALRAE--VPQARV-GWTPL---DVVAPTCDLLVHH  286 (384)
T ss_dssp             EEECSSSSSCCSSCCCCTTHHHHHHHHHTT-TCEEEEECCHHHHHHHHHH--CTTSEE-ECCCH---HHHGGGCSEEEEC
T ss_pred             EEECCCCCccccccccHHHHHHHHHHHhcC-CcEEEEEeCCCCHHhhCCC--CCceEE-cCCCH---HHHHhhCCEEEeC
Confidence            8889998765       6788999999886 7888887654433444432  348999 99953   5678999999965


Q ss_pred             CCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHHHHHHHH
Q 009759          399 SESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAAR  472 (526)
Q Consensus       399 s~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~~~~~a~  472 (526)
                          +.+++++|||++|+|+|+.+.++    ..+.+   .+.+.|+.++..  ++++++++|.+++.|++.++++++.++
T Consensus       287 ----~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~  359 (384)
T 2p6p_A          287 ----AGGVSTLTGLSAGVPQLLIPKGSVLEAPARRV---ADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQDLSR  359 (384)
T ss_dssp             ----SCTTHHHHHHHTTCCEEECCCSHHHHHHHHHH---HHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ----CcHHHHHHHHHhCCCEEEccCcccchHHHHHH---HHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence                34578999999999999998753    44555   455678888754  799999999999999999999988887


Q ss_pred             HHHHhCCHHHHHHHHH
Q 009759          473 QEMEKYDWRAATRTIR  488 (526)
Q Consensus       473 ~~~~~fs~~~~~~~~~  488 (526)
                      +....-..+.+++.+.
T Consensus       360 ~~~~~~~~~~~~~~i~  375 (384)
T 2p6p_A          360 EISGMPLPATVVTALE  375 (384)
T ss_dssp             HHHTSCCHHHHHHHHH
T ss_pred             HHHhCCCHHHHHHHHH
Confidence            7766667777776664

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=99.76  E-value=2e-18  Score=171.82  Aligned_cols=343  Identities=14%  Similarity=0.111  Sum_probs=213.9

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCc--eeccc--cccCCCcc--ccccchhc
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGA--KLIGS--RSFPCPWY--QKVPLSLA  191 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~--~~~~~--~~~~~~~~--~~~~~~~~  191 (526)
                      ..|+++|+..-|      --.-+..++++|.+. +++.++.++.........+  +..++  ..+.+...  ........
T Consensus         9 ~~~~~~v~GtRp------e~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~   81 (385)
T 4hwg_A            9 MLKVMTIVGTRP------ELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGIRKPDYFLEVAADNTAKSIGL   81 (385)
T ss_dssp             CCEEEEEECSHH------HHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCCCCCSEECCCCCCCSHHHHHH
T ss_pred             hhheeEEEEcCH------hHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCCCCCceecCCCCCCHHHHHHH
Confidence            368988875433      124577888889887 8888887664321111110  11111  11111111  11111123


Q ss_pred             ccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEe
Q 009759          192 LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLV  271 (526)
Q Consensus       192 ~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~  271 (526)
                      ....+.+++++++||+|++++.....+. .+.++..++|++....+. ..+    . ...  .-....+.+-+.+|.+++
T Consensus        82 ~~~~l~~~l~~~kPD~Vlv~gd~~~~~a-alaA~~~~IPv~h~eagl-rs~----~-~~~--pee~nR~~~~~~a~~~~~  152 (385)
T 4hwg_A           82 VIEKVDEVLEKEKPDAVLFYGDTNSCLS-AIAAKRRKIPIFHMEAGN-RCF----D-QRV--PEEINRKIIDHISDVNIT  152 (385)
T ss_dssp             HHHHHHHHHHHHCCSEEEEESCSGGGGG-HHHHHHTTCCEEEESCCC-CCS----C-TTS--THHHHHHHHHHHCSEEEE
T ss_pred             HHHHHHHHHHhcCCcEEEEECCchHHHH-HHHHHHhCCCEEEEeCCC-ccc----c-ccC--cHHHHHHHHHhhhceeec
Confidence            4567888999999999999986555555 667788999975433222 110    0 000  111223344567999999


Q ss_pred             CChhHHHHHHHhcccCCCcEEEeecCC-CCCCCC-CCcccHHHHHhhcCCCCCCcEEEEEecc---cccccHHHHHHHHH
Q 009759          272 PSVAIGKDLEAARVTAANKIRIWKKGV-DSESFH-PRFRSSEMRWRLSNGEPDKPLIVHVGRL---GVEKSLDFLKRVMD  346 (526)
Q Consensus       272 ~S~~~~~~l~~~~~~~~~ki~vi~ngi-d~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~vG~l---~~~Kg~~~li~a~~  346 (526)
                      .++..++.+.+.+. +.+++.++.|.+ |...+. +.......+.++++. +++.++++.||.   +..++++.+++++.
T Consensus       153 ~te~~~~~l~~~G~-~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~  230 (385)
T 4hwg_A          153 LTEHARRYLIAEGL-PAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQ  230 (385)
T ss_dssp             SSHHHHHHHHHTTC-CGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCC-CcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHH
Confidence            99999999988875 667899998854 322111 011223445556553 345555666664   34478999999988


Q ss_pred             hCC---CcEEEEEeCCccHHHHHHH---hc-CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEE
Q 009759          347 RLP---EARIAFIGDGPYREELEKM---FT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  419 (526)
Q Consensus       347 ~l~---~~~l~ivG~g~~~~~l~~l---~~-~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI  419 (526)
                      .+.   ++++++.......+.+++.   .. ..+|.+.+.+++.++..+|+.||++|..|     |+.+.||+++|+|+|
T Consensus       231 ~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv  305 (385)
T 4hwg_A          231 MLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GTITEEASILNLPAL  305 (385)
T ss_dssp             HHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEE
T ss_pred             HHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEE
Confidence            763   6777775543334444443   22 23799999988889999999999999766     456899999999999


Q ss_pred             EeCCC-CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHH-HHhCCHHHHHHHHH
Q 009759          420 GVRAG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQE-MEKYDWRAATRTIR  488 (526)
Q Consensus       420 ~~~~g-g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~-~~~fs~~~~~~~~~  488 (526)
                      +.... +.+|.+   +.| +++++.. |.+++++++.++++|+..+++|++++..+ ....+.+.+++.+.
T Consensus       306 ~~~~~ter~e~v---~~G-~~~lv~~-d~~~i~~ai~~ll~d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~  371 (385)
T 4hwg_A          306 NIREAHERPEGM---DAG-TLIMSGF-KAERVLQAVKTITEEHDNNKRTQGLVPDYNEAGLVSKKILRIVL  371 (385)
T ss_dssp             ECSSSCSCTHHH---HHT-CCEECCS-SHHHHHHHHHHHHTTCBTTBCCSCCCHHHHTCCCHHHHHHHHHH
T ss_pred             EcCCCccchhhh---hcC-ceEEcCC-CHHHHHHHHHHHHhChHHHHHhhccCCCCCCCChHHHHHHHHHH
Confidence            97654 356666   444 5666643 89999999999999988777665554444 33445555555443

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.70  E-value=2.4e-16  Score=160.92  Aligned_cols=157  Identities=13%  Similarity=0.023  Sum_probs=116.8

Q ss_pred             CCcEEEEEecccc-----cccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEE
Q 009759          322 DKPLIVHVGRLGV-----EKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFV  396 (526)
Q Consensus       322 ~~~~i~~vG~l~~-----~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v  396 (526)
                      ...+++++|++..     .+.+..++++++.+ ++++++.+.+...+.++.  ...||.+.|++++   .++|..||++|
T Consensus       267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-~~~~v~~~g~~~~~~l~~--~~~~v~~~~~~~~---~~ll~~ad~~V  340 (441)
T 2yjn_A          267 RRRVCLTLGISSRENSIGQVSIEELLGAVGDV-DAEIIATFDAQQLEGVAN--IPDNVRTVGFVPM---HALLPTCAATV  340 (441)
T ss_dssp             SCEEEEEC----------CCSTTTTHHHHHTS-SSEEEECCCTTTTSSCSS--CCSSEEECCSCCH---HHHGGGCSEEE
T ss_pred             CCEEEEECCCCcccccChHHHHHHHHHHHHcC-CCEEEEEECCcchhhhcc--CCCCEEEecCCCH---HHHHhhCCEEE
Confidence            3456788899865     37888999999887 788888765543322221  1237999999975   45689999999


Q ss_pred             ecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHHHHHH
Q 009759          397 MPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQA  470 (526)
Q Consensus       397 ~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~~~~~  470 (526)
                      ..    +.+++++|||++|+|+|+.+..+    ..+.+   .+...|+.++..  ++++++++|.++++|++.++++++.
T Consensus       341 ~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~  413 (441)
T 2yjn_A          341 HH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT---QEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARM  413 (441)
T ss_dssp             EC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH---HHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH---HHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            63    44689999999999999998743    34455   556678888765  8999999999999999999999888


Q ss_pred             HHHHHHhCCHHHHHHHHHHHHH
Q 009759          471 ARQEMEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       471 a~~~~~~fs~~~~~~~~~~~ly  492 (526)
                      +++..+....+.+++.++ ++.
T Consensus       414 ~~~~~~~~~~~~~~~~i~-~~~  434 (441)
T 2yjn_A          414 RDDMLAEPSPAEVVGICE-ELA  434 (441)
T ss_dssp             HHHHHTSCCHHHHHHHHH-HHH
T ss_pred             HHHHHcCCCHHHHHHHHH-HHH
Confidence            887777788888887775 443

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.67  E-value=4.2e-15  Score=150.91  Aligned_cols=338  Identities=15%  Similarity=0.093  Sum_probs=188.3

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-cccCceeccccc-cCCCc------cccccc-
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-EFYGAKLIGSRS-FPCPW------YQKVPL-  188 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~~~~~~~~~~~~-~~~~~------~~~~~~-  188 (526)
                      .|||+++..    + ..|+-..+..++++|+++||+|++++....... ...+.....+.. ++...      ...... 
T Consensus        12 ~~~Il~~~~----~-~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (424)
T 2iya_A           12 PRHISFFNI----P-GHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILPKESNPEESWPEDQESA   86 (424)
T ss_dssp             CCEEEEECC----S-CHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCCCSCCTTCTTCCCCSSHHHH
T ss_pred             cceEEEEeC----C-CCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEecCccccccccchhhcchhHHHH
Confidence            479998743    2 368888899999999999999999987542110 001222211111 00000      000000 


Q ss_pred             -------hhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccc-ccc-c---cccc------
Q 009759          189 -------SLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVY-IPR-Y---TFSW------  250 (526)
Q Consensus       189 -------~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-~~~-~---~~~~------  250 (526)
                             .......+.+++++.+||+|++.....   .+..+++..|+|.+...++..... ... .   ....      
T Consensus        87 ~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~---~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (424)
T 2iya_A           87 MGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASW---PAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEE  163 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCT---HHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCEEEEcCccc---HHHHHHHhcCCCEEEEecccccccccccccccccccccccccc
Confidence                   001223455666678999999876422   245567788999998776542110 000 0   0000      


Q ss_pred             ------------------ccchH-HHHHHH------------HhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCC
Q 009759          251 ------------------LVKPM-WLVIKF------------LHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD  299 (526)
Q Consensus       251 ------------------~~~~~-~~~~~~------------~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid  299 (526)
                                        ....+ ..+...            +...++.+++.+....+......   ..++..+...+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~---~~~~~~vGp~~~  240 (424)
T 2iya_A          164 AAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTV---GDNYTFVGPTYG  240 (424)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGGGC---CTTEEECCCCCC
T ss_pred             cccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCccCC---CCCEEEeCCCCC
Confidence                              00000 001111            11134445544433221110110   124444443321


Q ss_pred             CCCCCCCcccHHHHHhhcC-CCCCCcEEEEEecccc--cccHHHHHHHHHhCCCcEEE-EEeCCccHHHHHHHhcCCCeE
Q 009759          300 SESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIA-FIGDGPYREELEKMFTGMPAV  375 (526)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~-ivG~g~~~~~l~~l~~~~~V~  375 (526)
                      ...     ..    ..+.. ...+..++++.|+...  .+.+..++++++. .+++++ ++|.+...+.+..+  ..||.
T Consensus       241 ~~~-----~~----~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~-~~~~~~~~~g~~~~~~~~~~~--~~~v~  308 (424)
T 2iya_A          241 DRS-----HQ----GTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDG-LDWHVVLSVGRFVDPADLGEV--PPNVE  308 (424)
T ss_dssp             CCG-----GG----CCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTT-CSSEEEEECCTTSCGGGGCSC--CTTEE
T ss_pred             Ccc-----cC----CCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhc-CCcEEEEEECCcCChHHhccC--CCCeE
Confidence            110     00    00000 1234556778888762  2345566666665 367774 46765433332211  23799


Q ss_pred             EecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCCC--CHHH
Q 009759          376 FTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDD  449 (526)
Q Consensus       376 ~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~~--d~~~  449 (526)
                      +.+++++.   ++|..||++|..    +..++++||+++|+|+|+....+    ..+.+   .+.+.|+.++.+  +.++
T Consensus       309 ~~~~~~~~---~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~  378 (424)
T 2iya_A          309 VHQWVPQL---DILTKASAFITH----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERI---VELGLGRHIPRDQVTAEK  378 (424)
T ss_dssp             EESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH---HHTTSEEECCGGGCCHHH
T ss_pred             EecCCCHH---HHHhhCCEEEEC----CchhHHHHHHHcCCCEEEecCccchHHHHHHH---HHCCCEEEcCcCCCCHHH
Confidence            99999754   689999999853    33589999999999999997753    23344   445678777644  8999


Q ss_pred             HHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          450 CLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       450 la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      ++++|.++++|++.++++++.+++..+....+.+++.++
T Consensus       379 l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  417 (424)
T 2iya_A          379 LREAVLAVASDPGVAERLAAVRQEIREAGGARAAADILE  417 (424)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence            999999999999988888777766655566666666664

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.62  E-value=2.9e-14  Score=143.66  Aligned_cols=344  Identities=10%  Similarity=-0.021  Sum_probs=180.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCc-cccCceeccccccCCCc-----cccccchhcc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQ-EFYGAKLIGSRSFPCPW-----YQKVPLSLAL  192 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  192 (526)
                      |||+|++..     ..|.-..+..++++|+++||+|++++....... ...+.....+.......     ..........
T Consensus         1 MrIli~~~g-----t~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~   75 (404)
T 3h4t_A            1 MGVLITGCG-----SRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVV   75 (404)
T ss_dssp             -CEEEEEES-----SHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGH
T ss_pred             CeEEEEeCC-----CCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHHH
Confidence            899999753     247778899999999999999999986431100 00111111111000000     0000000001


Q ss_pred             cHHHHHHHHh-----cCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccc--cchHHHHHHHHhh-
Q 009759          193 SPRIISEVAR-----FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWL--VKPMWLVIKFLHR-  264 (526)
Q Consensus       193 ~~~l~~~l~~-----~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-  264 (526)
                      ...+...++.     .+||+|+++........+..++...++|++...|..+..........+.  ....+......+. 
T Consensus        76 ~~~~~~~~~~l~~~~~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (404)
T 3h4t_A           76 TEVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFGDAVNS  155 (404)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHHHHHHhHHHHHH
Confidence            1111111111     3899999887655444456778899999998888754221111100000  0000000000000 


Q ss_pred             -cCcEEEeCChhHHHHHHH----------hcccC--CCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEec
Q 009759          265 -AADLTLVPSVAIGKDLEA----------ARVTA--ANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGR  331 (526)
Q Consensus       265 -~ad~ii~~S~~~~~~l~~----------~~~~~--~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~  331 (526)
                       .++.-+.......+....          ....+  ..++..+.+.+...   .......+...+.  ...+.++++.|+
T Consensus       156 ~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~~~~~~~~~~G~~~~~~---~~~~~~~l~~~l~--~~~~~Vlv~~Gs  230 (404)
T 3h4t_A          156 HRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPD---QRPLSAELEGFLR--AGSPPVYVGFGS  230 (404)
T ss_dssp             HHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCCTTCCSCCBCCCCCCCC---CCCCCHHHHHHHH--TSSCCEEECCTT
T ss_pred             HHHHcCCCCCcchhhccccCCeEEeeCcceeCCCCCCCCeEEeCccccCC---CCCCCHHHHHHHh--cCCCeEEEECCC
Confidence             011111111111111000          00000  01121111111111   1111233333332  334567788898


Q ss_pred             cc-ccccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHH
Q 009759          332 LG-VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE  410 (526)
Q Consensus       332 l~-~~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilE  410 (526)
                      +. ..+.++.+++++..+ ++++++.+.....+.   .....||.+.++++.   ..++..||++|..    |..+++.|
T Consensus       231 ~~~~~~~~~~~~~al~~~-~~~vv~~~g~~~~~~---~~~~~~v~~~~~~~~---~~ll~~~d~~v~~----gG~~t~~E  299 (404)
T 3h4t_A          231 GPAPAEAARVAIEAVRAQ-GRRVVLSSGWAGLGR---IDEGDDCLVVGEVNH---QVLFGRVAAVVHH----GGAGTTTA  299 (404)
T ss_dssp             SCCCTTHHHHHHHHHHHT-TCCEEEECTTTTCCC---SSCCTTEEEESSCCH---HHHGGGSSEEEEC----CCHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHhC-CCEEEEEeCCccccc---ccCCCCEEEecCCCH---HHHHhhCcEEEEC----CcHHHHHH
Confidence            87 677789999999887 577777643321111   111348999999964   5678899999943    34579999


Q ss_pred             HHHcCCcEEEeCCCCCC----ceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHH
Q 009759          411 AMSSGIPVVGVRAGGIP----DIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAAT  484 (526)
Q Consensus       411 Ama~G~PvI~~~~gg~~----e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~  484 (526)
                      |+++|+|+|+...++-.    +.+   ++.+.|..+...  +.++++++|.++++ ++.++++.+.+..... ...+.++
T Consensus       300 al~~GvP~v~~p~~~dQ~~na~~~---~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~-~~~~~~~  374 (404)
T 3h4t_A          300 VTRAGAPQVVVPQKADQPYYAGRV---ADLGVGVAHDGPTPTVESLSAALATALT-PGIRARAAAVAGTIRT-DGTTVAA  374 (404)
T ss_dssp             HHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECSSSSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC-CHHHHHH
T ss_pred             HHHcCCCEEEcCCcccHHHHHHHH---HHCCCEeccCcCCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh-hHHHHHH
Confidence            99999999998765432    223   344567776543  79999999999998 8777666555543333 4455555


Q ss_pred             HHHH
Q 009759          485 RTIR  488 (526)
Q Consensus       485 ~~~~  488 (526)
                      +.++
T Consensus       375 ~~i~  378 (404)
T 3h4t_A          375 KLLL  378 (404)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.61  E-value=2.6e-15  Score=151.15  Aligned_cols=341  Identities=13%  Similarity=0.049  Sum_probs=174.5

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceecccc------ccCCC-------
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSR------SFPCP-------  181 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~------~~~~~-------  181 (526)
                      -.+.|||||++.    + ..|+-..+..|+++|+++||+|++++..........+.....+.      ....+       
T Consensus        19 ~~~~MRIL~~~~----p-~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   93 (400)
T 4amg_A           19 YFQSMRALFITS----P-GLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEAGLCAVDVSPGVNYAKLFVPDDTDVTD   93 (400)
T ss_dssp             --CCCEEEEECC----S-SHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTTTCEEEESSTTCCSHHHHSCCC-----
T ss_pred             CCCCCeEEEECC----C-chhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhcCCeeEecCCchhHhhhcccccccccc
Confidence            345699998853    2 35777889999999999999999998643110000011100000      00000       


Q ss_pred             ---cccccc---------chhcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccc
Q 009759          182 ---WYQKVP---------LSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFS  249 (526)
Q Consensus       182 ---~~~~~~---------~~~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~  249 (526)
                         ......         ........+.+.+++++||+|+......   .+..++...++|.+...+.......  ....
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~---~~~~~A~~~gip~~~~~~~~~~~~~--~~~~  168 (400)
T 4amg_A           94 PMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQG---AGPLTAAALQLPCVELPLGPADSEP--GLGA  168 (400)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCT---HHHHHHHHTTCCEEECCSSTTTCCH--HHHH
T ss_pred             ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchH---HHHHHHHHcCCCceeeccccccccc--chhh
Confidence               000000         0011123456677888999999876433   2445678899999875544322110  0000


Q ss_pred             cccchH-HHHHHHHh---hcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcE
Q 009759          250 WLVKPM-WLVIKFLH---RAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPL  325 (526)
Q Consensus       250 ~~~~~~-~~~~~~~~---~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (526)
                      ...+.. ....+...   ...+..+.......................-+.........+.        .+........+
T Consensus       169 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~~~~v  240 (400)
T 4amg_A          169 LIRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEALLPEDRRSPGAWPMRYVPYNGGAVLPD--------WLPPAAGRRRI  240 (400)
T ss_dssp             HHHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHTSCGGGCCTTCEECCCCCCCCCEECCT--------TCSCCTTCCEE
T ss_pred             HHHHHHHHHHHHhCCCcccccchhhcccCchhhccCcccccCCcccCcccccccccccCcc--------cccccCCCcEE
Confidence            000000 01111111   1122333333332222211111011111110000100000000        01111334456


Q ss_pred             EEEEeccccccc----HHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCC
Q 009759          326 IVHVGRLGVEKS----LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES  401 (526)
Q Consensus       326 i~~vG~l~~~Kg----~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~  401 (526)
                      ++..|++...++    +..+++++... +.++++.+.+...+....+  ..|+.+.+++|.   .++|..+|++|.    
T Consensus       241 ~vs~Gs~~~~~~~~~~~~~~~~~l~~~-~~~~v~~~~~~~~~~~~~~--~~~v~~~~~~p~---~~lL~~~~~~v~----  310 (400)
T 4amg_A          241 AVTLGSIDALSGGIAKLAPLFSEVADV-DAEFVLTLGGGDLALLGEL--PANVRVVEWIPL---GALLETCDAIIH----  310 (400)
T ss_dssp             EECCCSCC--CCSSSTTHHHHHHGGGS-SSEEEEECCTTCCCCCCCC--CTTEEEECCCCH---HHHHTTCSEEEE----
T ss_pred             EEeCCcccccCccHHHHHHHHHHhhcc-CceEEEEecCccccccccC--CCCEEEEeecCH---HHHhhhhhheec----
Confidence            677788754432    45555666555 5666665543322111111  237999999964   456899999983    


Q ss_pred             CCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHh
Q 009759          402 ETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEK  477 (526)
Q Consensus       402 e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~  477 (526)
                      .+..++++|||++|+|+|+....+-    .+.+   ++.+.|+.++.  .+..+++|.++++|++.+++.++-+++....
T Consensus       311 h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v---~~~G~g~~l~~--~~~~~~al~~lL~d~~~r~~a~~l~~~~~~~  385 (400)
T 4amg_A          311 HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL---TGLGIGFDAEA--GSLGAEQCRRLLDDAGLREAALRVRQEMSEM  385 (400)
T ss_dssp             CCCHHHHHHHHHHTCCEEECCC---CHHHHHHH---HHHTSEEECCT--TTCSHHHHHHHHHCHHHHHHHHHHHHHHHTS
T ss_pred             cCCccHHHHHHHhCCCEEEecCcccHHHHHHHH---HHCCCEEEcCC--CCchHHHHHHHHcCHHHHHHHHHHHHHHHcC
Confidence            4556799999999999999876542    2334   34456777663  4456789999999999888776666655555


Q ss_pred             CCHHHHHHHHH
Q 009759          478 YDWRAATRTIR  488 (526)
Q Consensus       478 fs~~~~~~~~~  488 (526)
                      -+...+++.++
T Consensus       386 ~~~~~~a~~le  396 (400)
T 4amg_A          386 PPPAETAAXLV  396 (400)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            67777776664

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.56  E-value=2.1e-13  Score=137.97  Aligned_cols=137  Identities=12%  Similarity=0.099  Sum_probs=98.4

Q ss_pred             CCcEEEEEecc-cccccHHHHHHHHHhCCCcEEEEE-eCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecC
Q 009759          322 DKPLIVHVGRL-GVEKSLDFLKRVMDRLPEARIAFI-GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  399 (526)
Q Consensus       322 ~~~~i~~vG~l-~~~Kg~~~li~a~~~l~~~~l~iv-G~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps  399 (526)
                      +..++++.|++ ...+..+.++++++.++ .+++++ |.+...  ...  ...+|.+.+++++.   ++|.+||++|.. 
T Consensus       238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~~-~~~v~~~g~~~~~--~~~--~~~~v~~~~~~~~~---~~l~~~d~~v~~-  308 (415)
T 1iir_A          238 PPPVYLGFGSLGAPADAVRVAIDAIRAHG-RRVILSRGWADLV--LPD--DGADCFAIGEVNHQ---VLFGRVAAVIHH-  308 (415)
T ss_dssp             SCCEEEECC---CCHHHHHHHHHHHHHTT-CCEEECTTCTTCC--CSS--CGGGEEECSSCCHH---HHGGGSSEEEEC-
T ss_pred             CCeEEEeCCCCCCcHHHHHHHHHHHHHCC-CeEEEEeCCCccc--ccC--CCCCEEEeCcCChH---HHHhhCCEEEeC-
Confidence            45678888998 58888999999999884 566554 754321  111  11279999999764   457999999963 


Q ss_pred             CCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCC--CCHHHHHHHHHHhhhCHHHHHHHHHHHHH
Q 009759          400 ESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQAARQ  473 (526)
Q Consensus       400 ~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~--~d~~~la~ai~~ll~d~~~~~~~~~~a~~  473 (526)
                         +..++++|||++|+|+|+....+    ..+.+   ++.+.|+.++.  .+.++++++|.++ .|++.++++.+.+++
T Consensus       309 ---~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~  381 (415)
T 1iir_A          309 ---GGAGTTHVAARAGAPQILLPQMADQPYYAGRV---AELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAVAGT  381 (415)
T ss_dssp             ---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHHHHH
T ss_pred             ---CChhHHHHHHHcCCCEEECCCCCccHHHHHHH---HHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHHHHH
Confidence               33579999999999999997754    23444   45567877764  3899999999999 998877776655544


Q ss_pred             H
Q 009759          474 E  474 (526)
Q Consensus       474 ~  474 (526)
                      .
T Consensus       382 ~  382 (415)
T 1iir_A          382 I  382 (415)
T ss_dssp             S
T ss_pred             H
Confidence            3

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.49  E-value=8.4e-13  Score=133.53  Aligned_cols=137  Identities=10%  Similarity=0.073  Sum_probs=98.2

Q ss_pred             CCcEEEEEeccc---ccccHHHHHHHHHhCCCcEEEEE-eCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEe
Q 009759          322 DKPLIVHVGRLG---VEKSLDFLKRVMDRLPEARIAFI-GDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  397 (526)
Q Consensus       322 ~~~~i~~vG~l~---~~Kg~~~li~a~~~l~~~~l~iv-G~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~  397 (526)
                      +..++++.|+..   ..+.++.++++++.+ +.+++++ |.+...  ...  ...++.+.++++.   .++|..||++|.
T Consensus       237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-~~~~v~~~g~~~~~--~~~--~~~~v~~~~~~~~---~~ll~~~d~~v~  308 (416)
T 1rrv_A          237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-GRRVILSRGWTELV--LPD--DRDDCFAIDEVNF---QALFRRVAAVIH  308 (416)
T ss_dssp             SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-TCCEEEECTTTTCC--CSC--CCTTEEEESSCCH---HHHGGGSSEEEE
T ss_pred             CCeEEEecCCCCccChHHHHHHHHHHHHHC-CCeEEEEeCCcccc--ccC--CCCCEEEeccCCh---HHHhccCCEEEe
Confidence            356777889884   567788889999887 5677665 754321  111  1237999999974   457899999995


Q ss_pred             cCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCC--CCHHHHHHHHHHhhhCHHHHHHHHHHH
Q 009759          398 PSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP--GDLDDCLSKLEPLLYNQELRETMGQAA  471 (526)
Q Consensus       398 ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~--~d~~~la~ai~~ll~d~~~~~~~~~~a  471 (526)
                          .+..++++||+++|+|+|+....+    ..+.+   ++.+.|+.++.  .+.++++++|.++ .|++.++++++.+
T Consensus       309 ----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~  380 (416)
T 1rrv_A          309 ----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRV---AALGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEAVA  380 (416)
T ss_dssp             ----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHH---HHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHHHT
T ss_pred             ----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHH---HHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHHHH
Confidence                344679999999999999987643    22334   44567777753  4799999999999 9988777766554


Q ss_pred             HHH
Q 009759          472 RQE  474 (526)
Q Consensus       472 ~~~  474 (526)
                      ++.
T Consensus       381 ~~~  383 (416)
T 1rrv_A          381 GMV  383 (416)
T ss_dssp             TTC
T ss_pred             HHH
Confidence            433

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.49  E-value=1.3e-12  Score=133.73  Aligned_cols=274  Identities=14%  Similarity=0.108  Sum_probs=174.1

Q ss_pred             cHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeC
Q 009759          193 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  272 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  272 (526)
                      ...+.+.+++.++||++--+.+... ....++...-.|+-++.-++.... +                  +...|++++-
T Consensus       338 ~~~ia~~Ir~d~IDILVdL~g~t~~-~~i~~aa~RpAPVQvs~lGyp~TT-G------------------l~~iDY~i~D  397 (631)
T 3q3e_A          338 LEFIRSVCESNGAAIFYMPSIGMDM-TTIFASNTRLAPIQAIALGHPATT-H------------------SDFIEYVIVE  397 (631)
T ss_dssp             HHHHHHHHHHHTCSEEEESCCSSSH-HHHHHTTSCCSSEEEEECSSCSCC-C------------------CTTCCEEEEE
T ss_pred             HHHHHHHHHhcCCCEEEECCCCCCc-hhHHHHhCCCchheEeccCCCccc-C------------------cccCCEEEeC
Confidence            4577888999999999885544432 234444566789988877743221 1                  2346777653


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCC-CCCcEEEEEecccccccHHHHHHHH----Hh
Q 009759          273 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGE-PDKPLIVHVGRLGVEKSLDFLKRVM----DR  347 (526)
Q Consensus       273 S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~vG~l~~~Kg~~~li~a~----~~  347 (526)
                      ....-  -...   ..+++..+|+..-.  +.|..... .+..+++.. .+.++++++++.  .|..+.+++++    ++
T Consensus       398 ~~~~~--~~~~---ysEklirLP~~~~~--~~p~~~~p-~r~~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~  467 (631)
T 3q3e_A          398 DDYVG--SEEC---FSETLLRLPKDALP--YVPSALAP-EKVDYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDR  467 (631)
T ss_dssp             GGGCC--CGGG---CSSEEEEECTTSSC--CCCCTTCC-SSCCCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHH
T ss_pred             CCCCC--cccC---ceeeEEECCCCccc--cCCcccCC-ccccccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHh
Confidence            32111  0122   34788888864311  11111100 011122211 124566666664  67666666555    45


Q ss_pred             CCCcEEE--EEeC--CccHHHHHHHhc---CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEE
Q 009759          348 LPEARIA--FIGD--GPYREELEKMFT---GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVG  420 (526)
Q Consensus       348 l~~~~l~--ivG~--g~~~~~l~~l~~---~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~  420 (526)
                      .|+..+.  ++|.  |.....+++..+   ..++.|.|.++.++....|+.+|+++.|+.+.| |++.+|||++|+|||+
T Consensus       468 vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVT  546 (631)
T 3q3e_A          468 AKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVC  546 (631)
T ss_dssp             CSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEE
T ss_pred             CCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEe
Confidence            5776553  3563  333333332221   237899999999999999999999999997755 9999999999999999


Q ss_pred             eCCCCCCceeccc---CCCceeE-eeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHH-H--hCCHHHHHHHHHHHHHH
Q 009759          421 VRAGGIPDIIPED---QDGKIGY-LFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEM-E--KYDWRAATRTIRNEQYN  493 (526)
Q Consensus       421 ~~~gg~~e~v~~~---~~~~~g~-~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~-~--~fs~~~~~~~~~~~ly~  493 (526)
                      ...+.+...+...   .-|-.++ +..  |.+++++...++..|++.+++++++.++.. .  -|+  ...+++. +.|+
T Consensus       547 l~G~~~asRvgaSlL~~~GLpE~LIA~--d~eeYv~~Av~La~D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e-~~ye  621 (631)
T 3q3e_A          547 KTGAEVHEHIDEGLFKRLGLPEWLIAN--TVDEYVERAVRLAENHQERLELRRYIIENNGLNTLFT--GDPRPMG-QVFL  621 (631)
T ss_dssp             ECCSSHHHHHHHHHHHHTTCCGGGEES--SHHHHHHHHHHHHHCHHHHHHHHHHHHHSCCHHHHTC--SCCTHHH-HHHH
T ss_pred             ccCCcHHHHhHHHHHHhcCCCcceecC--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhCCCcc--hhHHHHH-HHHH
Confidence            7655444333000   1233343 444  899999999999999999999999988886 3  355  6678885 8999


Q ss_pred             HHHHHHHHh
Q 009759          494 AAIWFWRKK  502 (526)
Q Consensus       494 ~~l~~~~~~  502 (526)
                      ++..+|+.+
T Consensus       622 ~~~~~w~~~  630 (631)
T 3q3e_A          622 EKLNAFLKE  630 (631)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhc
Confidence            999888754

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=99.38  E-value=2.9e-12  Score=133.80  Aligned_cols=286  Identities=12%  Similarity=0.095  Sum_probs=188.0

Q ss_pred             CCCEEEECCCchHHHHHHHHHH--------------hcCCCEEEEEecCCcccccccccccccc----------------
Q 009759          204 KPDIIHASSPGIMVFGALIIAK--------------LLCVPIVMSYHTHVPVYIPRYTFSWLVK----------------  253 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~--------------~~~~p~v~~~h~~~~~~~~~~~~~~~~~----------------  253 (526)
                      +||+||+|+++......-++..              ..+..+++|.|+..+.....+....+.+                
T Consensus       299 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f  378 (796)
T 1l5w_A          299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF  378 (796)
T ss_dssp             HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHH
Confidence            6899999998665433311111              1478899999998775432211110000                


Q ss_pred             -----------------------hHHHHHHHHhhcCcEEEeCChhHHHHHHHh-----cccCCCcEEEeecCCCCCCC--
Q 009759          254 -----------------------PMWLVIKFLHRAADLTLVPSVAIGKDLEAA-----RVTAANKIRIWKKGVDSESF--  303 (526)
Q Consensus       254 -----------------------~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~-----~~~~~~ki~vi~ngid~~~~--  303 (526)
                                             ....+....+..++.|-++|+...+.+++.     ...-..++.-+.|||+...|  
T Consensus       379 ~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~  458 (796)
T 1l5w_A          379 KTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIK  458 (796)
T ss_dssp             HHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTT
T ss_pred             HHHHHHhcCCcHHHHhhhhcccCCcccHHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhc
Confidence                                   001245567788999999999999988742     11234689999999988766  


Q ss_pred             --CCC--------------------------ccc---------------HH----HHHhhcCC-CCCCcEEEEEeccccc
Q 009759          304 --HPR--------------------------FRS---------------SE----MRWRLSNG-EPDKPLIVHVGRLGVE  335 (526)
Q Consensus       304 --~~~--------------------------~~~---------------~~----~~~~~~~~-~~~~~~i~~vG~l~~~  335 (526)
                        +|.                          ...               ..    ++++++.. .++.+.++++.|+..+
T Consensus       459 ~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eY  538 (796)
T 1l5w_A          459 QCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEY  538 (796)
T ss_dssp             TTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGG
T ss_pred             ccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhh
Confidence              332                          111               01    12233433 4577889999999999


Q ss_pred             ccHHH-HHHHHHhC-----------CCcEEEEEeCCc--cHHH------HHHHhc------CC----CeEEecccChhhH
Q 009759          336 KSLDF-LKRVMDRL-----------PEARIAFIGDGP--YREE------LEKMFT------GM----PAVFTGMLLGEEL  385 (526)
Q Consensus       336 Kg~~~-li~a~~~l-----------~~~~l~ivG~g~--~~~~------l~~l~~------~~----~V~~~g~v~~~~l  385 (526)
                      |+.++ ++..+.++           .+++|++.|.+.  +...      +..+++      ..    +|.|+...+.+-.
T Consensus       539 KRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA  618 (796)
T 1l5w_A          539 KRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAA  618 (796)
T ss_dssp             GTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHH
T ss_pred             cccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHH
Confidence            99999 77665443           258999999763  2222      333332      11    4777777776777


Q ss_pred             HHHHHcCcEEEecCC--CCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHH-------
Q 009759          386 SQAYASGDVFVMPSE--SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEP-------  456 (526)
Q Consensus       386 ~~~~~~aDv~v~ps~--~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~-------  456 (526)
                      ..++.+||+.++||+  .|++|+.-+-+|.+|.+.|++-.|..-|+..+ ...++||++.. +++++.+.-..       
T Consensus       619 ~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~-vG~~NgF~FG~-~~~ev~~l~~~~y~a~~~  696 (796)
T 1l5w_A          619 EKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEK-VGEENIFIFGH-TVEQVKAILAKGYDPVKW  696 (796)
T ss_dssp             HHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHH-HCGGGSEECSC-CHHHHHHHHHHCCCHHHH
T ss_pred             HHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhc-cCCCcEEEecC-CHHHHHHHHHcccCHHHH
Confidence            899999999999999  89999999999999999999888887777621 13479999986 77777643222       


Q ss_pred             hhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Q 009759          457 LLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI  496 (526)
Q Consensus       457 ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l  496 (526)
                      .-.+++ ++++-+++..  ..|||+.. ..+. .+|++++
T Consensus       697 y~~~~~-~~~vvd~~~~--g~fs~~~~-~~y~-~Ly~~L~  731 (796)
T 1l5w_A          697 RKKDKV-LDAVLKELES--GKYSDGDK-HAFD-QMLHSIG  731 (796)
T ss_dssp             HHHCHH-HHHHHHHHHH--TTTTTTCT-TTTH-HHHHHTS
T ss_pred             hhcCHH-HHHHHHHHHc--CCCCCCcH-HHHH-HHHHHHh
Confidence            222442 3333332221  47999775 5664 7887774

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=99.38  E-value=1.1e-12  Score=137.00  Aligned_cols=233  Identities=15%  Similarity=0.126  Sum_probs=160.5

Q ss_pred             HHHHHHhhcCcEEEeCChhHHHHHHHh-----cccCCCcEEEeecCCCCCCC----CCC---------------------
Q 009759          257 LVIKFLHRAADLTLVPSVAIGKDLEAA-----RVTAANKIRIWKKGVDSESF----HPR---------------------  306 (526)
Q Consensus       257 ~~~~~~~~~ad~ii~~S~~~~~~l~~~-----~~~~~~ki~vi~ngid~~~~----~~~---------------------  306 (526)
                      .+....+..++.|-++|+...+.+++.     ...-..++.-+.|||+...|    +|.                     
T Consensus       394 nMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l  473 (796)
T 2c4m_A          394 HMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDEL  473 (796)
T ss_dssp             EHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGG
T ss_pred             cHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHH
Confidence            345567788999999999999988742     11234689999999999988    332                     


Q ss_pred             ------ccc---------------HH----HHHhhcCC-CCCCcEEEEEecccccccHHH-HHHHHHhC-----------
Q 009759          307 ------FRS---------------SE----MRWRLSNG-EPDKPLIVHVGRLGVEKSLDF-LKRVMDRL-----------  348 (526)
Q Consensus       307 ------~~~---------------~~----~~~~~~~~-~~~~~~i~~vG~l~~~Kg~~~-li~a~~~l-----------  348 (526)
                            ...               ..    ++++.+.. .++.+.++++.|+..+|+.++ ++..+.++           
T Consensus       474 ~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~  553 (796)
T 2c4m_A          474 KKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDI  553 (796)
T ss_dssp             GGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSS
T ss_pred             HHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCC
Confidence                  111               01    12223332 457788999999999999999 77665443           


Q ss_pred             CCcEEEEEeCCc--cHHH------HHHHhc------CC----CeEEecccChhhHHHHHHcCcEEEecCC--CCCCcHHH
Q 009759          349 PEARIAFIGDGP--YREE------LEKMFT------GM----PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVV  408 (526)
Q Consensus       349 ~~~~l~ivG~g~--~~~~------l~~l~~------~~----~V~~~g~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~i  408 (526)
                      .+++|++.|.+.  +...      +..+++      ..    +|.|+...+.+-...++.+||+.++||+  .|++|+.-
T Consensus       554 ~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~  633 (796)
T 2c4m_A          554 PARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSN  633 (796)
T ss_dssp             CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHH
T ss_pred             CCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence            258999999763  2222      333332      11    4888877776778899999999999999  89999999


Q ss_pred             HHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCC--CCHHHHHHH---HHHhhhCHHHHHHHHHHHHHHH--HhCCHH
Q 009759          409 LEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP--GDLDDCLSK---LEPLLYNQELRETMGQAARQEM--EKYDWR  481 (526)
Q Consensus       409 lEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~--~d~~~la~a---i~~ll~d~~~~~~~~~~a~~~~--~~fs~~  481 (526)
                      +-+|.+|.+.|++-.|...|+..+ ...++||++..  .++.++...   ....-.+++ +++    ....+  ..|||+
T Consensus       634 MKam~NGaL~iGtLDGanvEi~e~-vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~~-~~~----vvd~~~~g~fs~~  707 (796)
T 2c4m_A          634 MKFMMNGALTLGTMDGANVEIVDS-VGEENAYIFGARVEELPALRESYKPYELYETVPG-LKR----ALDALDNGTLNDN  707 (796)
T ss_dssp             HHHHHTTCEEEEESSTHHHHHHHH-HCGGGSEEESCCTTTHHHHHHTCCHHHHHHHSTT-HHH----HHHTTTSSSSCCT
T ss_pred             HHHHHcCCeEEeccCCeEeehhhh-cCCCcEEEecCchhhHHHHHHhhChHHHhhcCHH-HHH----HHHHHHcCCCCCC
Confidence            999999999999988877776521 13479999976  667666654   111112331 222    22333  379997


Q ss_pred             HHHHHHHHHHHHHHHH
Q 009759          482 AATRTIRNEQYNAAIW  497 (526)
Q Consensus       482 ~~~~~~~~~ly~~~l~  497 (526)
                      .. ..+. .+|++++.
T Consensus       708 ~~-~~y~-~Ly~~L~~  721 (796)
T 2c4m_A          708 NS-GLFY-DLKHSLIH  721 (796)
T ss_dssp             TC-CHHH-HHHHHHHS
T ss_pred             CH-HHHH-HHHHHHHh
Confidence            76 5675 88888863

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.32  E-value=5.1e-12  Score=110.77  Aligned_cols=134  Identities=14%  Similarity=0.232  Sum_probs=101.3

Q ss_pred             CCCcEEEEEeccc---ccccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEe
Q 009759          321 PDKPLIVHVGRLG---VEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVM  397 (526)
Q Consensus       321 ~~~~~i~~vG~l~---~~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~  397 (526)
                      +...+++++|++.   ..|.+..+++++..++ .++++++.+...+.     ...+|++.|+++++++..+ ..||++|.
T Consensus        20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~-~~~~~~~g~~~~~~-----~~~~v~~~~~~~~~~~l~~-~~ad~~I~   92 (170)
T 2o6l_A           20 ENGVVVFSLGSMVSNMTEERANVIASALAQIP-QKVLWRFDGNKPDT-----LGLNTRLYKWIPQNDLLGH-PKTRAFIT   92 (170)
T ss_dssp             TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSS-SEEEEECCSSCCTT-----CCTTEEEESSCCHHHHHTS-TTEEEEEE
T ss_pred             CCCEEEEECCCCcccCCHHHHHHHHHHHHhCC-CeEEEEECCcCccc-----CCCcEEEecCCCHHHHhcC-CCcCEEEE
Confidence            3456788899985   6788999999998874 78877775543211     1238999999987554332 99999996


Q ss_pred             cCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHHHH
Q 009759          398 PSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMG  468 (526)
Q Consensus       398 ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~~~  468 (526)
                      .    +.+++++|||++|+|+|+.+..+    ..+.+   .+...|++++..  ++++++++|.+++.|++.++++.
T Consensus        93 ~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l---~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~  162 (170)
T 2o6l_A           93 H----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHM---KARGAAVRVDFNTMSSTDLLNALKRVINDPSYKENVM  162 (170)
T ss_dssp             C----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             c----CCccHHHHHHHcCCCEEeccchhhHHHHHHHH---HHcCCeEEeccccCCHHHHHHHHHHHHcCHHHHHHHH
Confidence            3    44699999999999999998753    24455   567789888765  89999999999999987554443

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=99.30  E-value=4.4e-11  Score=125.45  Aligned_cols=192  Identities=14%  Similarity=0.146  Sum_probs=137.0

Q ss_pred             HHHHHHhhcCcEEEeCChhHHHHHHHh-c----ccCCCcEEEeecCCCCCCC----CCCcc-------------------
Q 009759          257 LVIKFLHRAADLTLVPSVAIGKDLEAA-R----VTAANKIRIWKKGVDSESF----HPRFR-------------------  308 (526)
Q Consensus       257 ~~~~~~~~~ad~ii~~S~~~~~~l~~~-~----~~~~~ki~vi~ngid~~~~----~~~~~-------------------  308 (526)
                      .+....+..++.+-++|+-..+.+++. +    .....++.-+.|||+...|    +|...                   
T Consensus       429 nMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~  508 (824)
T 2gj4_A          429 NMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLR  508 (824)
T ss_dssp             EHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGG
T ss_pred             cHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHH
Confidence            345567888999999999998888642 1    1234689999999999988    33210                   


Q ss_pred             -------cHHH-------------------HHhhcCC-CCCCcEEEEEecccccccHHHH-HHHHHhC------C-----
Q 009759          309 -------SSEM-------------------RWRLSNG-EPDKPLIVHVGRLGVEKSLDFL-KRVMDRL------P-----  349 (526)
Q Consensus       309 -------~~~~-------------------~~~~~~~-~~~~~~i~~vG~l~~~Kg~~~l-i~a~~~l------~-----  349 (526)
                             ...+                   ....+.. .++.+.++++.|+..+|+.+++ +..+.++      |     
T Consensus       509 ~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~  588 (824)
T 2gj4_A          509 KLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVV  588 (824)
T ss_dssp             GGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCC
T ss_pred             HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCC
Confidence                   0111                   1112332 4577899999999999999997 6555443      2     


Q ss_pred             CcEEEEEeCCc--cHHH------HHHHhc--------CC--CeEEecccChhhHHHHHHcCcEEEecCC--CCCCcHHHH
Q 009759          350 EARIAFIGDGP--YREE------LEKMFT--------GM--PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVL  409 (526)
Q Consensus       350 ~~~l~ivG~g~--~~~~------l~~l~~--------~~--~V~~~g~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~il  409 (526)
                      +++|++.|.+.  +...      +..+++        ..  +|.|+...+.+-...++.+||+.++||+  .|++|+.-+
T Consensus       589 p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~M  668 (824)
T 2gj4_A          589 PRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM  668 (824)
T ss_dssp             CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHH
T ss_pred             CEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHH
Confidence            46999999764  2222      333332        11  4888877776777899999999999999  899999999


Q ss_pred             HHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHH
Q 009759          410 EAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDC  450 (526)
Q Consensus       410 EAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~l  450 (526)
                      -+|.+|.+.|++-.|...|+..+ ...++||++... ++++
T Consensus       669 KamlNGaLtigtlDGanvEi~e~-vG~~Ngf~FG~~-~~ev  707 (824)
T 2gj4_A          669 KFMLNGALTIGTMDGANVEMAEE-AGEENFFIFGMR-VEDV  707 (824)
T ss_dssp             HHHHTTCEEEECSCTTHHHHHHH-HCGGGSEECSCC-HHHH
T ss_pred             HHHHcCceEEEEecCccchhhhc-cCCCCEEEeCCc-HHHH
Confidence            99999999999988876666511 145689999864 6665

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=99.15  E-value=9.5e-10  Score=103.52  Aligned_cols=248  Identities=12%  Similarity=0.043  Sum_probs=146.8

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      |||+|.++..+ ....|+-.++..||++|+    +|.+++......  .  ...++......+.        .-...+.+
T Consensus         1 mki~ir~Da~~-~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~--~--~~~~g~~v~~l~~--------~d~~~~~~   63 (282)
T 3hbm_A            1 MKVLFRSDSSS-QIGFGHIKRDLVLAKQYS----DVSFACLPLEGS--L--IDEIPYPVYELSS--------ESIYELIN   63 (282)
T ss_dssp             CCEEEEECCBT-TTBSHHHHHHHHHHTTCS----SEEEEECCCTTC--C--GGGCCSCEEECSS--------SCHHHHHH
T ss_pred             CEEEEEEecCC-CccccHHHHHHHHHHHHH----hCEEEEecCcHh--H--HHHCCCeEEEcCc--------cCHHHHHH
Confidence            89999999866 666788899999999998    799887643211  0  0111111111110        12346777


Q ss_pred             HHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHH
Q 009759          199 EVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGK  278 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~  278 (526)
                      .+++.++|++++.++....-....++...+.++++ +-|..     +                 ...||.++-.+.....
T Consensus        64 ~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~-iDD~~-----~-----------------~~~~Dllin~~~~~~~  120 (282)
T 3hbm_A           64 LIKEEKFELLIIDHYGISVDDEKLIKLETGVKILS-FDDEI-----K-----------------PHHCDILLNVNAYAKA  120 (282)
T ss_dssp             HHHHHTCSEEEEECTTCCHHHHHHHHHHHCCEEEE-ECSSC-----C-----------------CCCCSEEEECSTTCCG
T ss_pred             HHHhCCCCEEEEECCCCCHHHHHHHHHhcCcEEEE-EecCC-----C-----------------cccCCEEEeCCcccch
Confidence            88888999999987654433222223334666653 44421     0                 0248999887654321


Q ss_pred             -HHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhh-cCCCCCCcEEEEEecccccccHHHHHHHHHhCCCcEEEEE
Q 009759          279 -DLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRL-SNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFI  356 (526)
Q Consensus       279 -~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~iv  356 (526)
                       .+...  .+.......  |.+.....+     ++.... ......+.+++++|..+...-...+++++..... -.++.
T Consensus       121 ~~Y~~~--~p~~~~~l~--G~~Y~~lR~-----eF~~~~~~~r~~~~~ILv~~GG~d~~~l~~~vl~~L~~~~~-i~vv~  190 (282)
T 3hbm_A          121 SDYEGL--VPFKCEVRC--GFSYALIRE-----EFYQEAKENRKKKYDFFICMGGTDIKNLSLQIASELPKTKI-ISIAT  190 (282)
T ss_dssp             GGGTTT--CC-CCEEEE--SGGGCCCCH-----HHHHHTTCCCCCCEEEEEECCSCCTTCHHHHHHHHSCTTSC-EEEEE
T ss_pred             hhcccc--CCCCCeEee--CCcccccCH-----HHHHhhhhccccCCeEEEEECCCchhhHHHHHHHHhhcCCC-EEEEE
Confidence             11111  122212222  443332221     111111 1111233456788887766556667777665443 33556


Q ss_pred             eCC-ccHHHHHHHhcC-CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCC
Q 009759          357 GDG-PYREELEKMFTG-MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRA  423 (526)
Q Consensus       357 G~g-~~~~~l~~l~~~-~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~  423 (526)
                      |.+ +..+++++...+ .++++.+++  +++.++|+.||++|.+     .|+++.|++++|+|.|....
T Consensus       191 G~~~~~~~~l~~~~~~~~~v~v~~~~--~~m~~~m~~aDlvI~~-----gG~T~~E~~~~g~P~i~ip~  252 (282)
T 3hbm_A          191 SSSNPNLKKLQKFAKLHNNIRLFIDH--ENIAKLMNESNKLIIS-----ASSLVNEALLLKANFKAICY  252 (282)
T ss_dssp             CTTCTTHHHHHHHHHTCSSEEEEESC--SCHHHHHHTEEEEEEE-----SSHHHHHHHHTTCCEEEECC
T ss_pred             CCCchHHHHHHHHHhhCCCEEEEeCH--HHHHHHHHHCCEEEEC-----CcHHHHHHHHcCCCEEEEeC
Confidence            765 456777766553 379999998  6999999999999973     25899999999999998654

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=99.00  E-value=1.2e-07  Score=101.72  Aligned_cols=178  Identities=11%  Similarity=0.111  Sum_probs=129.4

Q ss_pred             CCCCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEEeCCc-cHHHHHHHhcCC-----CeEEecccChhhHHHHHHc
Q 009759          320 EPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGP-YREELEKMFTGM-----PAVFTGMLLGEELSQAYAS  391 (526)
Q Consensus       320 ~~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~ivG~g~-~~~~l~~l~~~~-----~V~~~g~v~~~~l~~~~~~  391 (526)
                      +++.++++++.++.+  ..-++...++++++|+.+|++...+. ..+.+++.++..     +|.|.+..+.++....|+.
T Consensus       520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~  599 (723)
T 4gyw_A          520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQL  599 (723)
T ss_dssp             CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGG
T ss_pred             CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCC
Confidence            345556666655533  23466677888899999998887543 344555555432     5999999999999999999


Q ss_pred             CcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceeccc---CCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHH
Q 009759          392 GDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPED---QDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  468 (526)
Q Consensus       392 aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~---~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~  468 (526)
                      +||++=|.-+ +.+++.+||+.+|+|||+-....+..-+...   .-|-.-++..  |.++..+...++..|++.+..++
T Consensus       600 ~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~--~~~~Y~~~a~~la~d~~~l~~lr  676 (723)
T 4gyw_A          600 ADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK--NRQEYEDIAVKLGTDLEYLKKVR  676 (723)
T ss_dssp             CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS--SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             CeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC--CHHHHHHHHHHHhcCHHHHHHHH
Confidence            9999977655 3478999999999999987533222211000   0011223344  89999999999999999999999


Q ss_pred             HHHHHHHH---hCCHHHHHHHHHHHHHHHHHHHHHH
Q 009759          469 QAARQEME---KYDWRAATRTIRNEQYNAAIWFWRK  501 (526)
Q Consensus       469 ~~a~~~~~---~fs~~~~~~~~~~~ly~~~l~~~~~  501 (526)
                      +.-++...   -|+.+..++.++ ..|+++-++|..
T Consensus       677 ~~l~~~~~~s~l~d~~~~~~~le-~a~~~~w~r~~~  711 (723)
T 4gyw_A          677 GKVWKQRISSPLFNTKQYTMELE-RLYLQMWEHYAA  711 (723)
T ss_dssp             HHHHHHHHHSSTTCHHHHHHHHH-HHHHHHHHHHHT
T ss_pred             HHHHHHHHhCcCcCHHHHHHHHH-HHHHHHHHHHHc
Confidence            88888773   399999999996 899999888764

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=98.97  E-value=5.2e-07  Score=91.88  Aligned_cols=330  Identities=12%  Similarity=0.027  Sum_probs=171.9

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHC--CCeEEEEEeCCCCCc---c--------ccCceeccccccCCCcc
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQ---E--------FYGAKLIGSRSFPCPWY  183 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~---~--------~~~~~~~~~~~~~~~~~  183 (526)
                      ++++|+++..     ...|+-.-+..|++.|+++  ||+|+++++......   .        ..++....+..-..+..
T Consensus         8 ~~~~vv~~p~-----p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~   82 (463)
T 2acv_A            8 KNSELIFIPA-----PGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQ   82 (463)
T ss_dssp             HCEEEEEECC-----SSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCG
T ss_pred             CCCEEEEEcC-----cccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcc
Confidence            3478888742     2378888899999999999  999999987653211   0        01222222211111110


Q ss_pred             ---ccccc-----hhcccHHHHHHHHh---cCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecC---------Cc---
Q 009759          184 ---QKVPL-----SLALSPRIISEVAR---FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTH---------VP---  240 (526)
Q Consensus       184 ---~~~~~-----~~~~~~~l~~~l~~---~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~---------~~---  240 (526)
                         .....     .......+.+++++   .++|+|++.....  + +..+++..|+|.+...-..         .+   
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~--~-~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~  159 (463)
T 2acv_A           83 ELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCV--S-MIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ  159 (463)
T ss_dssp             GGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGG--G-GHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred             cccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcch--h-HHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence               00000     01112245566665   6899998865322  2 3456788999977644210         00   


Q ss_pred             --------------cccccccccccc-----------chHHH--HHHHHhhcCcEEEeCChhHHH-HHHHhcc---cCCC
Q 009759          241 --------------VYIPRYTFSWLV-----------KPMWL--VIKFLHRAADLTLVPSVAIGK-DLEAARV---TAAN  289 (526)
Q Consensus       241 --------------~~~~~~~~~~~~-----------~~~~~--~~~~~~~~ad~ii~~S~~~~~-~l~~~~~---~~~~  289 (526)
                                    ...+........           ..+..  .....++.++.+++.|-...+ .......   .+..
T Consensus       160 ~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~  239 (463)
T 2acv_A          160 IEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIP  239 (463)
T ss_dssp             TTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSC
T ss_pred             ccCCCCCccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCC
Confidence                          001111000000           00000  111234678887776543332 2211110   0123


Q ss_pred             cEEEeecCCCCCCCCC--C---cccHHHHHhhcCCCCCCcEEEEEeccc-cc--ccHHHHHHHHHhCCCcEEEE-EeCC-
Q 009759          290 KIRIWKKGVDSESFHP--R---FRSSEMRWRLSNGEPDKPLIVHVGRLG-VE--KSLDFLKRVMDRLPEARIAF-IGDG-  359 (526)
Q Consensus       290 ki~vi~ngid~~~~~~--~---~~~~~~~~~~~~~~~~~~~i~~vG~l~-~~--Kg~~~li~a~~~l~~~~l~i-vG~g-  359 (526)
                      ++..+..-.. ..-.+  .   ....+...-+....+...+++..|+.. ..  .-+..++++++.. +.++++ +|.+ 
T Consensus       240 ~v~~vGpl~~-~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~-~~~~l~~~~~~~  317 (463)
T 2acv_A          240 PIYAVGPLLD-LKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHS-GVRFLWSNSAEK  317 (463)
T ss_dssp             CEEECCCCCC-SSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH-TCEEEEECCCCG
T ss_pred             cEEEeCCCcc-cccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhC-CCcEEEEECCCc
Confidence            5666553221 11001  0   011223333333233455667778876 22  2255666666664 466655 4443 


Q ss_pred             -ccHHHHHHHhc-CCCeEEecccChhhHHHHHH--cCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC----ce-e
Q 009759          360 -PYREELEKMFT-GMPAVFTGMLLGEELSQAYA--SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP----DI-I  430 (526)
Q Consensus       360 -~~~~~l~~l~~-~~~V~~~g~v~~~~l~~~~~--~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~----e~-v  430 (526)
                       ...+.+.+... ..++.+.+|+++.   .+|.  ++|++|    .-+..++++||+++|+|+|+....+-+    .. +
T Consensus       318 ~~l~~~~~~~~~~~~~~~v~~w~pq~---~vL~h~~~~~fv----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv  390 (463)
T 2acv_A          318 KVFPEGFLEWMELEGKGMICGWAPQV---EVLAHKAIGGFV----SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLV  390 (463)
T ss_dssp             GGSCTTHHHHHHHHCSEEEESSCCHH---HHHHSTTEEEEE----ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH
T ss_pred             ccCChhHHHhhccCCCEEEEccCCHH---HHhCCCccCeEE----ecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHH
Confidence             12222322220 2378899999754   4576  678888    345568999999999999998764322    22 3


Q ss_pred             cccCCCceeEee-C-------CCCHHHHHHHHHHhhh-CHHHHHH
Q 009759          431 PEDQDGKIGYLF-N-------PGDLDDCLSKLEPLLY-NQELRET  466 (526)
Q Consensus       431 ~~~~~~~~g~~~-~-------~~d~~~la~ai~~ll~-d~~~~~~  466 (526)
                         +..+.|+.+ .       .-+.+++.++|.++++ +++.+++
T Consensus       391 ---~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~  432 (463)
T 2acv_A          391 ---KEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKK  432 (463)
T ss_dssp             ---HTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHH
T ss_pred             ---HHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHH
Confidence               455677777 2       2378999999999996 3444433

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=98.89  E-value=3.6e-06  Score=86.04  Aligned_cols=326  Identities=14%  Similarity=0.030  Sum_probs=162.7

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCC-Ccc--------ccCceeccccccCCCccc--
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGV-PQE--------FYGAKLIGSRSFPCPWYQ--  184 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~--  184 (526)
                      ++|+|+++..     ...|+-.-+..|++.|+++ ||+|+++++.... ...        ..++....+..-..+...  
T Consensus         5 ~~~~vl~~p~-----p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~   79 (480)
T 2vch_A            5 KTPHVAIIPS-----PGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSS   79 (480)
T ss_dssp             -CCEEEEECC-----SCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTT
T ss_pred             CCcEEEEecC-----cchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCc
Confidence            4478888742     2357888899999999998 9999999876521 100        012222211110000000  


Q ss_pred             -cccc-----hhcccHHHHHHHHh----cCC-CEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCc-------------
Q 009759          185 -KVPL-----SLALSPRIISEVAR----FKP-DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVP-------------  240 (526)
Q Consensus       185 -~~~~-----~~~~~~~l~~~l~~----~~p-DiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-------------  240 (526)
                       ....     .......+.+++++    .++ |+|++......   +..++...|+|.+...-....             
T Consensus        80 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~---~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~  156 (480)
T 2vch_A           80 TRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTD---AFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDE  156 (480)
T ss_dssp             CCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGG---GHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchh---HHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHh
Confidence             0000     01112344555554    378 99998653222   245678899997765532110             


Q ss_pred             ------------cccccc--------cccccc---chHHHH--HHHHhhcCcEEEeCChhH--HHHHHHhc-cc-CCCcE
Q 009759          241 ------------VYIPRY--------TFSWLV---KPMWLV--IKFLHRAADLTLVPSVAI--GKDLEAAR-VT-AANKI  291 (526)
Q Consensus       241 ------------~~~~~~--------~~~~~~---~~~~~~--~~~~~~~ad~ii~~S~~~--~~~l~~~~-~~-~~~ki  291 (526)
                                  ...+..        ......   .....+  ....++.++.+++.|-..  ...+.... .. ...++
T Consensus       157 ~~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v  236 (480)
T 2vch_A          157 TVSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPV  236 (480)
T ss_dssp             HCCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCE
T ss_pred             cCCCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcE
Confidence                        000000        000000   011111  122355678887655322  22111111 00 01355


Q ss_pred             EEeecCCCCCCCCC-CcccHHHHHhhcCCCCCCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEE-eCCc-------
Q 009759          292 RIWKKGVDSESFHP-RFRSSEMRWRLSNGEPDKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFI-GDGP-------  360 (526)
Q Consensus       292 ~vi~ngid~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~iv-G~g~-------  360 (526)
                      ..|..-.....-.. .........-+....++..+++..|+...  ..-+..++++++.. +.+++++ |.+.       
T Consensus       237 ~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~-~~~~lw~~~~~~~~~~~~~  315 (480)
T 2vch_A          237 YPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADS-EQRFLWVIRSPSGIANSSY  315 (480)
T ss_dssp             EECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHT-TCEEEEEECCCCSSTTTTT
T ss_pred             EEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhc-CCcEEEEECCccccccccc
Confidence            55543332110000 00111222222222234566677888743  23355666777766 4666553 4321       


Q ss_pred             ------------cHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC-
Q 009759          361 ------------YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP-  427 (526)
Q Consensus       361 ------------~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~-  427 (526)
                                  ..+.+.+..++.++.+.+|+|+.   .+++.+++.++-+  .+.-++++||+++|+|+|+....+-. 
T Consensus       316 ~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~---~vL~h~~v~~fvt--HgG~~S~~Eal~~GvP~i~~P~~~DQ~  390 (480)
T 2vch_A          316 FDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQA---QVLAHPSTGGFLT--HCGWNSTLESVVSGIPLIAWPLYAEQK  390 (480)
T ss_dssp             TCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHH---HHHHSTTEEEEEE--CCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred             cccccccchhhhcCHHHHHHhCCCeEEEeCccCHH---HHhCCCCcCeEEe--cccchhHHHHHHcCCCEEeccccccch
Confidence                        01112222233345666799753   7798888533222  34457999999999999998765322 


Q ss_pred             ---ce-ecccCCCceeEeeCC-----CCHHHHHHHHHHhhh
Q 009759          428 ---DI-IPEDQDGKIGYLFNP-----GDLDDCLSKLEPLLY  459 (526)
Q Consensus       428 ---e~-v~~~~~~~~g~~~~~-----~d~~~la~ai~~ll~  459 (526)
                         .. +   +.-+.|+.+..     -+.++++++|.+++.
T Consensus       391 ~na~~l~---~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~  428 (480)
T 2vch_A          391 MNAVLLS---EDIRAALRPRAGDDGLVRREEVARVVKGLME  428 (480)
T ss_dssp             HHHHHHH---HTTCCEECCCCCTTSCCCHHHHHHHHHHHHT
T ss_pred             HHHHHHH---HHhCeEEEeecccCCccCHHHHHHHHHHHhc
Confidence               12 2   34456666643     378999999999998

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=98.88  E-value=3.4e-07  Score=93.93  Aligned_cols=142  Identities=11%  Similarity=0.121  Sum_probs=91.2

Q ss_pred             CCcEEEEEecccc--cccHHHHHHHHHhCCCcEEEEE-eCCc-------cHHHHHHHhcCCCeEEecccChhhHHHHHHc
Q 009759          322 DKPLIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFI-GDGP-------YREELEKMFTGMPAVFTGMLLGEELSQAYAS  391 (526)
Q Consensus       322 ~~~~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~iv-G~g~-------~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~  391 (526)
                      ...+++..|+...  ...+..++++++.. +.+++++ |...       ..+.+.+.. ..|+.+.+|+|+.   .+|+.
T Consensus       295 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~v~~~~pq~---~~L~h  369 (482)
T 2pq6_A          295 GSVVYVNFGSTTVMTPEQLLEFAWGLANC-KKSFLWIIRPDLVIGGSVIFSSEFTNEI-ADRGLIASWCPQD---KVLNH  369 (482)
T ss_dssp             TCEEEEECCSSSCCCHHHHHHHHHHHHHT-TCEEEEECCGGGSTTTGGGSCHHHHHHH-TTTEEEESCCCHH---HHHTS
T ss_pred             CceEEEecCCcccCCHHHHHHHHHHHHhc-CCcEEEEEcCCccccccccCcHhHHHhc-CCCEEEEeecCHH---HHhcC
Confidence            3455677777642  22356667777765 4666554 4221       223333323 3489999999754   47876


Q ss_pred             CcE--EEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCc----eecccCCCceeEeeC-CCCHHHHHHHHHHhhhCHHHH
Q 009759          392 GDV--FVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPD----IIPEDQDGKIGYLFN-PGDLDDCLSKLEPLLYNQELR  464 (526)
Q Consensus       392 aDv--~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e----~v~~~~~~~~g~~~~-~~d~~~la~ai~~ll~d~~~~  464 (526)
                      +++  +|    .-+..++++||+++|+|+|+....+-+.    .+.  +..+.|+.+. .-+.+++.++|.+++.|++ .
T Consensus       370 ~~~~~~v----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~--~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~-~  442 (482)
T 2pq6_A          370 PSIGGFL----THCGWNSTTESICAGVPMLCWPFFADQPTDCRFIC--NEWEIGMEIDTNVKREELAKLINEVIAGDK-G  442 (482)
T ss_dssp             TTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTSCCEEECCSSCCHHHHHHHHHHHHTSHH-H
T ss_pred             CCCCEEE----ecCCcchHHHHHHcCCCEEecCcccchHHHHHHHH--HHhCEEEEECCCCCHHHHHHHHHHHHcCCc-H
Confidence            665  66    3455679999999999999987754221    120  2455677665 2479999999999999886 3


Q ss_pred             HHHHHHHHHHH
Q 009759          465 ETMGQAARQEM  475 (526)
Q Consensus       465 ~~~~~~a~~~~  475 (526)
                      +++++++++..
T Consensus       443 ~~~r~~a~~l~  453 (482)
T 2pq6_A          443 KKMKQKAMELK  453 (482)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            56666666554

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=98.83  E-value=2.6e-07  Score=93.95  Aligned_cols=142  Identities=13%  Similarity=0.150  Sum_probs=90.0

Q ss_pred             CCCcEEEEEecccccc--cHHHHHHHHHhCCCcEEEE-EeCCcc---HHHHHHHhcCCCeEEecccChhhHHHHHH--cC
Q 009759          321 PDKPLIVHVGRLGVEK--SLDFLKRVMDRLPEARIAF-IGDGPY---REELEKMFTGMPAVFTGMLLGEELSQAYA--SG  392 (526)
Q Consensus       321 ~~~~~i~~vG~l~~~K--g~~~li~a~~~l~~~~l~i-vG~g~~---~~~l~~l~~~~~V~~~g~v~~~~l~~~~~--~a  392 (526)
                      ++..+++..|+.....  -+..++++++.. +.++++ +|....   .+.+.+.. ..++.+.+|+++.   ++|.  ++
T Consensus       270 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~l~~~~~~~~-~~~~~v~~w~pq~---~vL~h~~~  344 (456)
T 2c1x_A          270 PTSVVYISFGTVTTPPPAEVVALSEALEAS-RVPFIWSLRDKARVHLPEGFLEKT-RGYGMVVPWAPQA---EVLAHEAV  344 (456)
T ss_dssp             TTCEEEEECCSSCCCCHHHHHHHHHHHHHH-TCCEEEECCGGGGGGSCTTHHHHH-TTTEEEESCCCHH---HHHTSTTE
T ss_pred             CcceEEEecCccccCCHHHHHHHHHHHHhc-CCeEEEEECCcchhhCCHHHHhhc-CCceEEecCCCHH---HHhcCCcC
Confidence            4455667778775432  244555666554 455544 453321   11222211 2478999999753   5688  67


Q ss_pred             cEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC----ceecccCCC-ceeEeeCC--CCHHHHHHHHHHhhhCHHHHH
Q 009759          393 DVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP----DIIPEDQDG-KIGYLFNP--GDLDDCLSKLEPLLYNQELRE  465 (526)
Q Consensus       393 Dv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~----e~v~~~~~~-~~g~~~~~--~d~~~la~ai~~ll~d~~~~~  465 (526)
                      |++|    .-+..++++||+++|+|+|+....+-.    ..+   .+. +.|+.++.  -+.++++++|.+++.|++ .+
T Consensus       345 ~~fv----th~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l---~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~-~~  416 (456)
T 2c1x_A          345 GAFV----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMV---EDVLEIGVRIEGGVFTKSGLMSCFDQILSQEK-GK  416 (456)
T ss_dssp             EEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHTSCCEEECGGGSCCHHHHHHHHHHHHHSHH-HH
T ss_pred             CEEE----ecCCcchHHHHHHhCceEEecCChhhHHHHHHHH---HHHhCeEEEecCCCcCHHHHHHHHHHHHCCCc-HH
Confidence            8888    345568999999999999998764322    223   334 56776653  378999999999999975 45


Q ss_pred             HHHHHHHHHH
Q 009759          466 TMGQAARQEM  475 (526)
Q Consensus       466 ~~~~~a~~~~  475 (526)
                      ++++++++..
T Consensus       417 ~~r~~a~~l~  426 (456)
T 2c1x_A          417 KLRENLRALR  426 (456)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            5555555553

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=98.77  E-value=1.1e-06  Score=88.66  Aligned_cols=337  Identities=10%  Similarity=0.030  Sum_probs=169.8

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCC--CeEEEEEeCCCC------C-ccccCceeccccc-cCCCccc--c
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMG--DEVMVVTTHEGV------P-QEFYGAKLIGSRS-FPCPWYQ--K  185 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~------~-~~~~~~~~~~~~~-~~~~~~~--~  185 (526)
                      +++|+++.    ++ .-|+-.-+.+|++.|+.+|  +.|+++++....      . .....++...+.. ++.....  .
T Consensus        13 ~~hvv~~P----~p-~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~   87 (454)
T 3hbf_A           13 LLHVAVLA----FP-FGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGN   87 (454)
T ss_dssp             CCEEEEEC----CC-SSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSC
T ss_pred             CCEEEEEc----CC-cccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCC
Confidence            46887773    23 3588888999999999999  999999863210      0 0011122211110 1110000  0


Q ss_pred             ----ccchh-cccHHHHHHHHh------cCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCC---------c-----
Q 009759          186 ----VPLSL-ALSPRIISEVAR------FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHV---------P-----  240 (526)
Q Consensus       186 ----~~~~~-~~~~~l~~~l~~------~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~---------~-----  240 (526)
                          ..... .....+.+.+++      .++|.|++......   +.-.++..|+|.+..+-...         +     
T Consensus        88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w---~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~  164 (454)
T 3hbf_A           88 PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWF---GADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK  164 (454)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTT---HHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchH---HHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhh
Confidence                00000 001122333332      36798888654322   34567888999876543200         0     


Q ss_pred             ------------cccccc---c----ccccc----chHH-H--HHHHHhhcCcEEEeCChhHHHH--HHHhcccCCCcEE
Q 009759          241 ------------VYIPRY---T----FSWLV----KPMW-L--VIKFLHRAADLTLVPSVAIGKD--LEAARVTAANKIR  292 (526)
Q Consensus       241 ------------~~~~~~---~----~~~~~----~~~~-~--~~~~~~~~ad~ii~~S~~~~~~--l~~~~~~~~~ki~  292 (526)
                                  ...+..   .    .....    .... .  ........++.+++.|-...+.  +....... .++.
T Consensus       165 ~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~  243 (454)
T 3hbf_A          165 TGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KLLL  243 (454)
T ss_dssp             CCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEE
T ss_pred             cCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CCEE
Confidence                        000100   0    00000    0111 1  1223456789999988654432  11111111 2555


Q ss_pred             EeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEeccccc--ccHHHHHHHHHhCCCcEEEEE-eCCcc---HHHHH
Q 009759          293 IWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAFI-GDGPY---REELE  366 (526)
Q Consensus       293 vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~--Kg~~~li~a~~~l~~~~l~iv-G~g~~---~~~l~  366 (526)
                      .|..-+....-.......+...-+....++..+++..|+....  ..+..++++++.. +.+|+.+ |.+..   .+.+.
T Consensus       244 ~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~-~~~flw~~~~~~~~~lp~~~~  322 (454)
T 3hbf_A          244 NVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEEC-GFPFIWSFRGDPKEKLPKGFL  322 (454)
T ss_dssp             ECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHH-CCCEEEECCSCHHHHSCTTHH
T ss_pred             EECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhC-CCeEEEEeCCcchhcCCHhHH
Confidence            5442211000000011122333333223445566777877542  2355566666665 4555554 43221   11111


Q ss_pred             HHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC----CceecccCCC-ceeEe
Q 009759          367 KMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI----PDIIPEDQDG-KIGYL  441 (526)
Q Consensus       367 ~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~----~e~v~~~~~~-~~g~~  441 (526)
                      +.. ..++.+.+|+|+   ..++..+++.++-+  -+.-++++||+++|+|.|+....+-    ...+   .+. +.|+.
T Consensus       323 ~~~-~~~~~vv~w~Pq---~~vL~h~~v~~fvt--H~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v---~~~~g~Gv~  393 (454)
T 3hbf_A          323 ERT-KTKGKIVAWAPQ---VEILKHSSVGVFLT--HSGWNSVLECIVGGVPMISRPFFGDQGLNTILT---ESVLEIGVG  393 (454)
T ss_dssp             HHT-TTTEEEESSCCH---HHHHHSTTEEEEEE--CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HTTSCSEEE
T ss_pred             hhc-CCceEEEeeCCH---HHHHhhcCcCeEEe--cCCcchHHHHHHcCCCEecCcccccHHHHHHHH---HHhhCeeEE
Confidence            111 237888899975   37788999443333  2445799999999999999876432    1223   342 66776


Q ss_pred             eCC--CCHHHHHHHHHHhhhCHHHHHHHHHHHHHH
Q 009759          442 FNP--GDLDDCLSKLEPLLYNQELRETMGQAARQE  474 (526)
Q Consensus       442 ~~~--~d~~~la~ai~~ll~d~~~~~~~~~~a~~~  474 (526)
                      ++.  -+.+++.++|.+++.+++ .+++++++++.
T Consensus       394 l~~~~~~~~~l~~av~~ll~~~~-~~~~r~~a~~l  427 (454)
T 3hbf_A          394 VDNGVLTKESIKKALELTMSSEK-GGIMRQKIVKL  427 (454)
T ss_dssp             CGGGSCCHHHHHHHHHHHHSSHH-HHHHHHHHHHH
T ss_pred             ecCCCCCHHHHHHHHHHHHCCCh-HHHHHHHHHHH
Confidence            653  478999999999998852 34444444443

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=98.50  E-value=1.6e-05  Score=77.64  Aligned_cols=105  Identities=13%  Similarity=0.137  Sum_probs=69.1

Q ss_pred             HHHhhcCCCCCCcEEEEEec-cccccc--HHHHHHHHHhC--CCcEEEEEeCCccHHHHHHHhcCC------Ce-EEecc
Q 009759          312 MRWRLSNGEPDKPLIVHVGR-LGVEKS--LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM------PA-VFTGM  379 (526)
Q Consensus       312 ~~~~~~~~~~~~~~i~~vG~-l~~~Kg--~~~li~a~~~l--~~~~l~ivG~g~~~~~l~~l~~~~------~V-~~~g~  379 (526)
                      .+..++....++.+++..|. ....|.  .+.+.++++.+  .+++++++|...+.+..+++.+..      ++ .+.|.
T Consensus       170 ~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~  249 (348)
T 1psw_A          170 TCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGE  249 (348)
T ss_dssp             HHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTT
T ss_pred             HHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCc
Confidence            34444432234455667776 445555  34566655554  378999999766665555555432      34 56788


Q ss_pred             cChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          380 LLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       380 v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                      .+-.++..+++.||++|....    | .+-.|.|+|+|+|+-
T Consensus       250 ~sl~e~~ali~~a~l~I~~Ds----g-~~HlAaa~g~P~v~l  286 (348)
T 1psw_A          250 TQLDQAVILIAACKAIVTNDS----G-LMHVAAALNRPLVAL  286 (348)
T ss_dssp             SCHHHHHHHHHTSSEEEEESS----H-HHHHHHHTTCCEEEE
T ss_pred             CCHHHHHHHHHhCCEEEecCC----H-HHHHHHHcCCCEEEE
Confidence            777899999999999996642    3 344499999999975

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=98.07  E-value=0.00013  Score=78.69  Aligned_cols=255  Identities=12%  Similarity=-0.003  Sum_probs=136.8

Q ss_pred             HHhcCCCEEEEEecCCccccccccc-----ccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCC
Q 009759          224 AKLLCVPIVMSYHTHVPVYIPRYTF-----SWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGV  298 (526)
Q Consensus       224 ~~~~~~p~v~~~h~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngi  298 (526)
                      .+..+..+|.+.|+...........     ..................|.+++.|+...+.+.+.++.+..++..+..+-
T Consensus       432 ~k~~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR  511 (729)
T 3l7i_A          432 NKKENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFNRETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPR  511 (729)
T ss_dssp             CCCTTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHHHHHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGG
T ss_pred             ccCCCcEEEECCCCCchhhccccccccccccccCHHHHHHHHHhhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCc
Confidence            3556777888899862211111000     00111112222334567899999999999999988876545555544332


Q ss_pred             CCCCCCCC---cccHHHHHhhcCCCCCCcEEEEEeccccc-------------ccHHHHHHHHHhCCCcEEEEEeCCccH
Q 009759          299 DSESFHPR---FRSSEMRWRLSNGEPDKPLIVHVGRLGVE-------------KSLDFLKRVMDRLPEARIAFIGDGPYR  362 (526)
Q Consensus       299 d~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~vG~l~~~-------------Kg~~~li~a~~~l~~~~l~ivG~g~~~  362 (526)
                      ....+...   .....++.++++ ..++.+|+|+-++...             .+++.+.+.+.  .++.+++-.. +. 
T Consensus       512 ~D~l~~~~~~~~~~~~~~~~~~~-~~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~--~~~~li~r~H-p~-  586 (729)
T 3l7i_A          512 NDVLVNRANDQEYLDEIRTHLNL-PSDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELG--DDYVILLRMH-YL-  586 (729)
T ss_dssp             GHHHHHSTTCHHHHHHHHHHTTC-CSSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHT--TTEEEEECCC-HH-
T ss_pred             hHHHhcccchHHHHHHHHHHhCC-CCCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcC--CCeEEEEecC-cc-
Confidence            21122111   112345555654 5678899999877543             23444444443  3666666443 11 


Q ss_pred             HHHHHHhc--CC--CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCcee-------c
Q 009759          363 EELEKMFT--GM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDII-------P  431 (526)
Q Consensus       363 ~~l~~l~~--~~--~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v-------~  431 (526)
                        +.....  ..  .+....  +..++.++|..||++|     .-++.+++|++..++|||....- ..++.       .
T Consensus       587 --~~~~~~~~~~~~~~~~~~--~~~di~~ll~~aD~lI-----TDySSv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~  656 (729)
T 3l7i_A          587 --ISNALDLSGYENFAIDVS--NYNDVSELFLISDCLI-----TDYSSVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYM  656 (729)
T ss_dssp             --HHTTCCCTTCTTTEEECT--TCSCHHHHHHTCSEEE-----ESSCTHHHHHGGGCCCEEEECTT-TTTTTSSCCSBSS
T ss_pred             --hhccccccccCCcEEeCC--CCcCHHHHHHHhCEEE-----eechHHHHhHHhhCCCEEEecCC-HHHHhhccCCccc
Confidence              111111  11  222222  2358999999999999     34678999999999999976211 11111       0


Q ss_pred             ccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Q 009759          432 EDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAA  495 (526)
Q Consensus       432 ~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~  495 (526)
                      +..+...|-++.  +.++|.++|...........+..+.-++..-.|.-.+.++++.+.+++..
T Consensus       657 d~~~~~pg~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~  718 (729)
T 3l7i_A          657 NYMEDLPGPIYT--EPYGLAKELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDI  718 (729)
T ss_dssp             CTTSSSSSCEES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHH
T ss_pred             ChhHhCCCCeEC--CHHHHHHHHhhhhccchhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcC
Confidence            101223455555  89999999988765433332222222222212333355666655555443

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=97.95  E-value=0.002  Score=62.00  Aligned_cols=134  Identities=13%  Similarity=0.097  Sum_probs=79.6

Q ss_pred             CCcEEEEEeccccccc--HHHHHHHHHhC--CCcEEEEE-eCCccHHHHHHHhcCC-CeEEecccChhhHHHHHHcCcEE
Q 009759          322 DKPLIVHVGRLGVEKS--LDFLKRVMDRL--PEARIAFI-GDGPYREELEKMFTGM-PAVFTGMLLGEELSQAYASGDVF  395 (526)
Q Consensus       322 ~~~~i~~vG~l~~~Kg--~~~li~a~~~l--~~~~l~iv-G~g~~~~~l~~l~~~~-~V~~~g~v~~~~l~~~~~~aDv~  395 (526)
                      ++.+++..|.-...|.  .+.+.++++.+  .++++++. |...+.+..+++.+.. ++.+.|..+-.|+..+++.||++
T Consensus       178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~l~  257 (326)
T 2gt1_A          178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFV  257 (326)
T ss_dssp             TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCCEE
Confidence            3445566665555554  45777777776  36888887 5333344445554432 57778888889999999999999


Q ss_pred             EecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeE-----eeCCCCHHHHHHHHHHhhhC
Q 009759          396 VMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGY-----LFNPGDLDDCLSKLEPLLYN  460 (526)
Q Consensus       396 v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~-----~~~~~d~~~la~ai~~ll~d  460 (526)
                      |..-    .|..-+ |.|.|+|+|+--.+..+....+..+....+     ....-+++++.+++.++++.
T Consensus       258 I~~D----SG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~  322 (326)
T 2gt1_A          258 VSVD----TGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK  322 (326)
T ss_dssp             EEES----SHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred             EecC----CcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence            9552    244444 788999999762221111111101111100     12233678888888877753

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=97.94  E-value=0.0017  Score=63.15  Aligned_cols=260  Identities=14%  Similarity=0.062  Sum_probs=135.3

Q ss_pred             CCCCcEEEEEeccCCCCccCchHH--HHHHHHHHHHHC--CCeEEEEEeCCCCCc--cccCceeccccccCCCccccccc
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKN--RFQNFIKYLREM--GDEVMVVTTHEGVPQ--EFYGAKLIGSRSFPCPWYQKVPL  188 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~--~~~~l~~~L~~~--G~~V~vi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  188 (526)
                      .-..||||++..       ++.++  ....++++|++.  +.++++++......-  ....+.  .+..+....   ...
T Consensus         5 ~l~~~~iLvi~~-------~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd--~vi~~~~~~---~~~   72 (349)
T 3tov_A            5 ELDYKRIVVTFL-------MHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNID--ELIVVDKKG---RHN   72 (349)
T ss_dssp             CCTTCEEEEECC-------CCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCS--EEEEECCSS---HHH
T ss_pred             CCCCCEEEEEec-------CcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCcc--EEEEeCccc---ccc
Confidence            344589999854       34444  457789999987  889999987542110  011111  111111110   011


Q ss_pred             hhcccHHHHHHHHhcCC-CEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCc
Q 009759          189 SLALSPRIISEVARFKP-DIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAAD  267 (526)
Q Consensus       189 ~~~~~~~l~~~l~~~~p-DiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad  267 (526)
                      .+.....+.+.+++.++ |+++.-....-   ..++....++|..+.+.......    .                  .+
T Consensus        73 ~~~~~~~l~~~Lr~~~y~D~vidl~~~~r---s~~l~~~~~a~~riG~~~~~~~~----~------------------~~  127 (349)
T 3tov_A           73 SISGLNEVAREINAKGKTDIVINLHPNER---TSYLAWKIHAPITTGMSHFLFRP----F------------------MT  127 (349)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCSHH---HHHHHHHHCCSEEEECCCTTTGG----G------------------CS
T ss_pred             cHHHHHHHHHHHhhCCCCeEEEECCCChH---HHHHHHHhCCCeEEecCCCCccc----c------------------cc
Confidence            12233456677788899 99987654322   23345667888776543311000    0                  01


Q ss_pred             EEEeC-------ChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHH---HHHhhcCCCCCCcEEEEEeccccccc
Q 009759          268 LTLVP-------SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSE---MRWRLSNGEPDKPLIVHVGRLGVEKS  337 (526)
Q Consensus       268 ~ii~~-------S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~vG~l~~~Kg  337 (526)
                      ..+..       .+...+.+...+ .+.      ........+.+......   .....++...++.+++..|.-...|.
T Consensus       128 ~~~~~~~~~~h~v~r~~~ll~~lg-~~~------~~~~~~~l~~~~~~~~~~~~~l~~~g~~~~~~~i~i~pga~~~~k~  200 (349)
T 3tov_A          128 KYTRLDRKTRHAADMYINVLEQLG-VTD------TSNSGLHIEICEEWRCQAQEFYSSHGLTDTDILIGFNIGSAVPEKR  200 (349)
T ss_dssp             EECCCCTTTSCHHHHHHHHHHHTT-CCC------CCCCCCCCCCCHHHHHHHHHHHHHTTCCTTCCEEEEECCCSSGGGC
T ss_pred             ccccCCCCCccHHHHHHHHHHHhC-CCc------cCCCceeeeCCHHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCccCC
Confidence            11100       011122222222 110      00011111211111111   11222332234445566675444554


Q ss_pred             --HHHHHHHHHhC--CCcEEEEEeCCccHHHHHHHhcCC---CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHH
Q 009759          338 --LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM---PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLE  410 (526)
Q Consensus       338 --~~~li~a~~~l--~~~~l~ivG~g~~~~~l~~l~~~~---~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilE  410 (526)
                        .+.+.++++.+  .+.+++++|...+.+..++..+..   .+.+.|..+-.++..+++.||++|..-    .|..-+ 
T Consensus       201 wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~~~i~~D----sG~~Hl-  275 (349)
T 3tov_A          201 WPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCNLLITND----SGPMHV-  275 (349)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCSEEEEES----SHHHHH-
T ss_pred             CCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCCEEEECC----CCHHHH-
Confidence              34555555544  268899999766666666655433   356678888889999999999999652    244444 


Q ss_pred             HHHcCCcEEEeCC
Q 009759          411 AMSSGIPVVGVRA  423 (526)
Q Consensus       411 Ama~G~PvI~~~~  423 (526)
                      |.|+|+|+|+--.
T Consensus       276 Aaa~g~P~v~lfg  288 (349)
T 3tov_A          276 GISQGVPIVALYG  288 (349)
T ss_dssp             HHTTTCCEEEECS
T ss_pred             HHhcCCCEEEEEC
Confidence            9999999998643

>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*

Probab=97.86  E-value=0.011  Score=50.88  Aligned_cols=332  Identities=15%  Similarity=0.133  Sum_probs=188.5

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHH
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (526)
                      .|||.++...  -....|.....++.-..+.+.||+|+++...+..-.....   ..-..+.++...     .....+..
T Consensus         1 smricifmar--glegcgvtkfsleqrdwfiknghevtlvyakdksftrtss---hdhksfsipvil-----akeydkal   70 (401)
T 1xv5_A            1 SMRICIFMAR--GLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRTSS---HDHKSFSIPVIL-----AKEYDKAL   70 (401)
T ss_dssp             CCEEEEEETT--CCCSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTTTS---SSCTTTCEEECT-----TTCHHHHH
T ss_pred             CceEEEEeec--cccccCceeeehhhhhhhhcCCcEEEEEEecccccccccc---ccCccccceeEe-----hhhhHHHh
Confidence            3899998664  2456788888899999999999999999876532111100   000111111100     00112333


Q ss_pred             HHHHhcCCCEEEECCCchH-----HH---HHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEE
Q 009759          198 SEVARFKPDIIHASSPGIM-----VF---GALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  269 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~~~~~-----~~---~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  269 (526)
                      +++.  +.||+++++....     ..   --++-.-+..+++|++-||+.-....+..          -.....+++|.+
T Consensus        71 klvn--dcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlslrrnl----------gleetvrradvi  138 (401)
T 1xv5_A           71 KLVN--DCDILIINSVPATSVQEATINNYKKLLDNIKPSIRVVVYQHDHSVLSLRRNL----------GLEETVRRADVI  138 (401)
T ss_dssp             HHHT--SCSEEEEEECCBTTSCHHHHHHHHHHHHHSCTTSEEEEEECCCSHHHHTTBS----------SHHHHHHHCSEE
T ss_pred             hhhc--cCcEEEEccCccchhHHHHHhhHHHHHhcCCCceEEEEEeccchhhhhhhhc----------ChHHhhhhhceE
Confidence            4443  7899888753211     11   11122223467899999997543322211          134457889999


Q ss_pred             EeCChh---HHHHHHHhcccCCCcEEEee---cCCCCCCCCCCcccHHHHHhhcCCCCCC---cEEEEEecccccccHHH
Q 009759          270 LVPSVA---IGKDLEAARVTAANKIRIWK---KGVDSESFHPRFRSSEMRWRLSNGEPDK---PLIVHVGRLGVEKSLDF  340 (526)
Q Consensus       270 i~~S~~---~~~~l~~~~~~~~~ki~vi~---ngid~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~vG~l~~~Kg~~~  340 (526)
                      +..|+.   .+-.+.++++.   .+....   ..-..-.|.|+.+....|..+-. +-..   .+--++||-..+||+-.
T Consensus       139 fshsdngdfnkvlmkewype---tvslfddieeaptvynfqppmdivkvrstywk-dvseinmninrwigrtttwkgfyq  214 (401)
T 1xv5_A          139 FSHSDNGDFNKVLMKEWYPE---TVSLFDDIEEAPTVYNFQPPMDIVKVRSTYWK-DVSEINMNINRWIGRTTTWKGFYQ  214 (401)
T ss_dssp             EESCTTSHHHHTHHHHHSCS---SCCSSSCCCCCCCEEECCCCBCHHHHHHHHCC-CGGGCEEEEEEEECCSCGGGCHHH
T ss_pred             EecCCCCcHHHHHHHhhccc---hhhhhcchhhCCceeccCCCceeeeeehhhhc-cHHHhhcchhhhhcccchhHhHHH
Confidence            998863   33344555531   111110   00001124455444444444321 1111   23358999999999999


Q ss_pred             HHHHHHhC--C-CcEEEEEeCCccHHHHHHHhcCCC-------------------eEEecccChhhHHHHHHcCcEEEec
Q 009759          341 LKRVMDRL--P-EARIAFIGDGPYREELEKMFTGMP-------------------AVFTGMLLGEELSQAYASGDVFVMP  398 (526)
Q Consensus       341 li~a~~~l--~-~~~l~ivG~g~~~~~l~~l~~~~~-------------------V~~~g~v~~~~l~~~~~~aDv~v~p  398 (526)
                      +.+.-++.  | .-.-++-|-......+.-..++..                   ..++.-.-..++.+-++.+-+....
T Consensus       215 mfdfhekflkpagkstvmeglerspafiaikekgipyeyygnreidkmnlapnqpaqildcyinsemlermsksgfgyql  294 (401)
T 1xv5_A          215 MFDFHEKFLKPAGKSTVMEGLERSPAFIAIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCYINSEMLERMSKSGFGYQL  294 (401)
T ss_dssp             HHHHHHHTTTTTTCEEEEECCCCSHHHHHHHHTTCCEEEECGGGGGGCCCSSSCCEEEESCCCHHHHHHHHHTEEEEEEC
T ss_pred             HhhHHHHhcCccchhhhhhhhhcCCceEEEcccCCchhhcCcchhhhhcCCCCCcchhhhheecHHHHHHhhhcCcccch
Confidence            88877766  3 233455553322222222112212                   3444434456788888888888776


Q ss_pred             CC------CCCCcHHHHHHHHcCCcEEEeCCCCCC-c-ee--cccCCCcee-EeeCCCCHHHHHHHHHHhhhCHHHHHHH
Q 009759          399 SE------SETLGLVVLEAMSSGIPVVGVRAGGIP-D-II--PEDQDGKIG-YLFNPGDLDDCLSKLEPLLYNQELRETM  467 (526)
Q Consensus       399 s~------~e~~~~~ilEAma~G~PvI~~~~gg~~-e-~v--~~~~~~~~g-~~~~~~d~~~la~ai~~ll~d~~~~~~~  467 (526)
                      |.      ....-.+-+|--|||+..|-....|.. . -+  .+......| +.++.+|.++-.+.|.++..|..++.+-
T Consensus       295 sklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmestferikelssdralydre  374 (401)
T 1xv5_A          295 SKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLTSHDSGIIWFDENDMESTFERIKELSSDRALYDRE  374 (401)
T ss_dssp             CCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBGGGSCCSCEEECTTCHHHHHHHHHHHHTCHHHHHHH
T ss_pred             HHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCcccccCCceEEecCCchHHHHHHHHHhccchhhhhHH
Confidence            64      246678899999999877655332211 0 00  000122334 4578889999999999999999999999


Q ss_pred             HHHHHHHH
Q 009759          468 GQAARQEM  475 (526)
Q Consensus       468 ~~~a~~~~  475 (526)
                      ++.+.+++
T Consensus       375 rekayefl  382 (401)
T 1xv5_A          375 REKAYEFL  382 (401)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998887

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=96.99  E-value=0.00047  Score=61.94  Aligned_cols=46  Identities=9%  Similarity=0.105  Sum_probs=38.1

Q ss_pred             CeEEecccChhhHHHHHH-cCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          373 PAVFTGMLLGEELSQAYA-SGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       373 ~V~~~g~v~~~~l~~~~~-~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      ++...+|+  +++..+|+ .||++|    .-+..++++|++++|+|.|.-...
T Consensus       115 ~v~v~~f~--~~m~~~l~~~AdlvI----shaGagTv~Eal~~G~P~IvVP~~  161 (224)
T 2jzc_A          115 KVIGFDFS--TKMQSIIRDYSDLVI----SHAGTGSILDSLRLNKPLIVCVND  161 (224)
T ss_dssp             EEEECCSS--SSHHHHHHHHCSCEE----ESSCHHHHHHHHHTTCCCCEECCS
T ss_pred             eEEEeecc--chHHHHHHhcCCEEE----ECCcHHHHHHHHHhCCCEEEEcCc
Confidence            45666777  69999999 999999    345578999999999999887654

>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}

Probab=92.98  E-value=0.048  Score=43.80  Aligned_cols=80  Identities=16%  Similarity=0.120  Sum_probs=49.9

Q ss_pred             CCCCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcc
Q 009759          113 ENNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLAL  192 (526)
Q Consensus       113 ~~~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (526)
                      .+..++||||+|-+. +        .....+.+.|.+.||+|.-.+.+                                
T Consensus         3 ~m~~r~~rILiVdD~-~--------~~~~~l~~~L~~~G~~v~~~a~~--------------------------------   41 (123)
T 2lpm_A            3 HMTERRLRVLVVEDE-S--------MIAMLIEDTLCELGHEVAATASR--------------------------------   41 (123)
T ss_dssp             CCCCCCCCEEEESSS-T--------TTSHHHHHHHHHHCCCCCBCSCC--------------------------------
T ss_pred             CCCCCCCEEEEEeCC-H--------HHHHHHHHHHHHCCCEEEEEECC--------------------------------
Confidence            456778999999764 2        22355667778889987422111                                


Q ss_pred             cHHHHHHHHhcCCCEEEECC--CchHHHHHHHHHHhcCCCEEE
Q 009759          193 SPRIISEVARFKPDIIHASS--PGIMVFGALIIAKLLCVPIVM  233 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~--~~~~~~~~~~~~~~~~~p~v~  233 (526)
                      .....+.+++.+||+|+..-  |...++......+..++|+|+
T Consensus        42 g~eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~   84 (123)
T 2lpm_A           42 MQEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIF   84 (123)
T ss_dssp             HHHHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCC
T ss_pred             HHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEE
Confidence            12455667778999999953  444444444444556788664

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=91.82  E-value=6.4  Score=39.31  Aligned_cols=269  Identities=16%  Similarity=0.176  Sum_probs=128.9

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      ..|||+++          |.+..-..+++.|.+.||+|+++-.+........  ....+..+.         .-......
T Consensus         2 ~~M~iiI~----------G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~--~~~~~~~i~---------Gd~~~~~~   60 (461)
T 4g65_A            2 NAMKIIIL----------GAGQVGGTLAENLVGENNDITIVDKDGDRLRELQ--DKYDLRVVN---------GHASHPDV   60 (461)
T ss_dssp             CCEEEEEE----------CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHH--HHSSCEEEE---------SCTTCHHH
T ss_pred             CcCEEEEE----------CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH--HhcCcEEEE---------EcCCCHHH
Confidence            46999777          3347778999999999999999965432111110  000111110         01112344


Q ss_pred             HHHHHhcCCCEEEECCCc--hHHHHHHHHHHhcCCC-EEEEEecCCcccccccccccccchHHHHHHHHh---hcCcEEE
Q 009759          197 ISEVARFKPDIIHASSPG--IMVFGALIIAKLLCVP-IVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLH---RAADLTL  270 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~--~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ad~ii  270 (526)
                      .+...-.+.|++++....  .....+.+++...+.+ ++.-..+..  +...            .+....   -..|.++
T Consensus        61 L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~~~iar~~~~~--~~~~------------~~~l~~~~~~giD~iI  126 (461)
T 4g65_A           61 LHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIARIRSPQ--YLAQ------------KEALFKSGAIPVDHLI  126 (461)
T ss_dssp             HHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCSSEEEECCCHH--HHTT------------HHHHTTTSSSCCSEEE
T ss_pred             HHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCccceeEeccch--hhhh------------hhhhhhcccCCcceee
Confidence            444444588999886542  3334444444444554 444444321  1100            011111   1357777


Q ss_pred             eCChhHHHHHHHhcccC---------CCcEEEeecCCCCCCCCCCcccHHHHHhhc----------------CC-----C
Q 009759          271 VPSVAIGKDLEAARVTA---------ANKIRIWKKGVDSESFHPRFRSSEMRWRLS----------------NG-----E  320 (526)
Q Consensus       271 ~~S~~~~~~l~~~~~~~---------~~ki~vi~ngid~~~~~~~~~~~~~~~~~~----------------~~-----~  320 (526)
                      .+.....+.+.+.-..+         ..++.++.--+.....-....-.+++..+.                .+     .
T Consensus       127 sPe~~~a~~I~~~i~~p~~~~~~~f~~g~~~l~e~~v~~~s~l~g~~l~~l~~~~p~~~~~I~aI~R~g~~iiP~g~t~i  206 (461)
T 4g65_A          127 APEELVTSYIERLIQYPGALQVVSFAEEKVSLVAVKAYYGGPLVGNALSALREHMPHIDTRVAAIFRQGRPIRPQGTTII  206 (461)
T ss_dssp             CHHHHHHHHHHHHHTSTTCSEEEEETTTTEEEEEEECCTTSSSTTCBHHHHHHTSTTSCEEEEEEEETTEEECCCTTCBC
T ss_pred             cHHHHHHHHHHHhccCCCeEEEEEeccceEEEEEEEecCCCeecCCcHHHHHhhCCCCceEEEEEEECCeeccCCCCcee
Confidence            77666666665543211         223332222121111000011111211110                00     0


Q ss_pred             CCCcEEEEEecccccccHHHHHHHHHhC--CCcEEEEEeCCccHHH--------------------HHHHhcCC--CeEE
Q 009759          321 PDKPLIVHVGRLGVEKSLDFLKRVMDRL--PEARIAFIGDGPYREE--------------------LEKMFTGM--PAVF  376 (526)
Q Consensus       321 ~~~~~i~~vG~l~~~Kg~~~li~a~~~l--~~~~l~ivG~g~~~~~--------------------l~~l~~~~--~V~~  376 (526)
                      ...-.+.++|   ..+.++.+.+.+...  +--++.|+|.|..-..                    ++.+.+.+  -+.+
T Consensus       207 ~~gD~v~~i~---~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~~~~Vi  283 (461)
T 4g65_A          207 EADDEVFFVA---ASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELENTIVF  283 (461)
T ss_dssp             CTTCEEEEEE---ETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCTTSEEE
T ss_pred             cCCCEEEEEe---ccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCCCceEE
Confidence            1112233333   245666666666544  2246888887653333                    33333322  1456


Q ss_pred             ecccChhhHHH--HHHcCcEEEecCCC-CCCcHHHHHHHHcCCcEEEeCC
Q 009759          377 TGMLLGEELSQ--AYASGDVFVMPSES-ETLGLVVLEAMSSGIPVVGVRA  423 (526)
Q Consensus       377 ~g~v~~~~l~~--~~~~aDv~v~ps~~-e~~~~~ilEAma~G~PvI~~~~  423 (526)
                      .|--.+.++..  =+..+|+++..+.. |.-=+..+-|-.+|.+=+.+.+
T Consensus       284 ~GD~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~v  333 (461)
T 4g65_A          284 CGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLI  333 (461)
T ss_dssp             ESCTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             eccccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccc
Confidence            67666555443  36888999877654 3333455667788887666543

>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0

Probab=91.08  E-value=0.61  Score=41.24  Aligned_cols=91  Identities=14%  Similarity=0.256  Sum_probs=50.2

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHH-CCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhccc
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLRE-MGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALS  193 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (526)
                      ..++|||+++.+        |.+.-+..+++++.+ .+++|..+.++.............+++.+..+. ........+-
T Consensus         2 ~~~~~riavl~S--------G~Gsnl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~-~~~~~r~~~d   72 (215)
T 3tqr_A            2 NREPLPIVVLIS--------GNGTNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPH-EEFPSRTDFE   72 (215)
T ss_dssp             --CCEEEEEEES--------SCCHHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCG-GGSSSHHHHH
T ss_pred             CCCCcEEEEEEe--------CCcHHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCc-cccCchhHhH
Confidence            345789999875        333567778888766 467888777754322111111112222222111 0011112223


Q ss_pred             HHHHHHHHhcCCCEEEECCCc
Q 009759          194 PRIISEVARFKPDIIHASSPG  214 (526)
Q Consensus       194 ~~l~~~l~~~~pDiV~~~~~~  214 (526)
                      ..+.+.+++.+||+|++-.+.
T Consensus        73 ~~~~~~l~~~~~Dliv~agy~   93 (215)
T 3tqr_A           73 STLQKTIDHYDPKLIVLAGFM   93 (215)
T ss_dssp             HHHHHHHHTTCCSEEEESSCC
T ss_pred             HHHHHHHHhcCCCEEEEccch
Confidence            568889999999999998753

>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}

Probab=89.37  E-value=1.6  Score=38.99  Aligned_cols=89  Identities=15%  Similarity=0.161  Sum_probs=48.4

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHC--CCeEEEEEeCCCCCccccCceeccccccCCCccccccchhccc
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALS  193 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (526)
                      .+.|||+++...        .+..+..++++|.+.  +++|..+..+.............+++.+.... ..+...-.+-
T Consensus        20 ~~~~rI~~l~SG--------~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~-~~~~~r~~~~   90 (229)
T 3auf_A           20 GHMIRIGVLISG--------SGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDP-AAYPSRTAFD   90 (229)
T ss_dssp             TTCEEEEEEESS--------CCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCG-GGSSSHHHHH
T ss_pred             CCCcEEEEEEeC--------CcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECc-ccccchhhcc
Confidence            445799999753        225678888888876  67877666653322111001111222221110 0000111123


Q ss_pred             HHHHHHHHhcCCCEEEECCC
Q 009759          194 PRIISEVARFKPDIIHASSP  213 (526)
Q Consensus       194 ~~l~~~l~~~~pDiV~~~~~  213 (526)
                      ..+.+.+++.+||+|++-.+
T Consensus        91 ~~~~~~l~~~~~Dliv~agy  110 (229)
T 3auf_A           91 AALAERLQAYGVDLVCLAGY  110 (229)
T ss_dssp             HHHHHHHHHTTCSEEEESSC
T ss_pred             HHHHHHHHhcCCCEEEEcCh
Confidence            46778889999999999875

>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}

Probab=88.93  E-value=2.3  Score=34.38  Aligned_cols=81  Identities=14%  Similarity=0.130  Sum_probs=48.1

Q ss_pred             CCCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhccc
Q 009759          114 NNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALS  193 (526)
Q Consensus       114 ~~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (526)
                      .+.++||||+|-+. +        .....+.+.|.+.|++++..+.+.                                
T Consensus         8 ~m~k~~rILiVDD~-~--------~~r~~l~~~L~~~G~~~v~~a~~g--------------------------------   46 (134)
T 3to5_A            8 ILNKNMKILIVDDF-S--------TMRRIVKNLLRDLGFNNTQEADDG--------------------------------   46 (134)
T ss_dssp             -CCTTCCEEEECSC-H--------HHHHHHHHHHHHTTCCCEEEESSH--------------------------------
T ss_pred             HhCCCCEEEEEeCC-H--------HHHHHHHHHHHHcCCcEEEEECCH--------------------------------
Confidence            35677999999763 1        344566777888998754332211                                


Q ss_pred             HHHHHHHHhcCCCEEEECC--CchHHHHHHHHHH----hcCCCEEEEE
Q 009759          194 PRIISEVARFKPDIIHASS--PGIMVFGALIIAK----LLCVPIVMSY  235 (526)
Q Consensus       194 ~~l~~~l~~~~pDiV~~~~--~~~~~~~~~~~~~----~~~~p~v~~~  235 (526)
                      ....+.+++.+||+|+...  |...++......+    ...+|+|+..
T Consensus        47 ~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lT   94 (134)
T 3to5_A           47 LTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMIT   94 (134)
T ss_dssp             HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEE
T ss_pred             HHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEE
Confidence            1445566777999999954  4444444333222    2467876543

>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}

Probab=87.81  E-value=1.8  Score=38.31  Aligned_cols=86  Identities=10%  Similarity=0.088  Sum_probs=47.2

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCC--eEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGD--EVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~--~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      |||+++...        .+..+..++++|.+.++  +|..+.++.............+++.+.... ......-.+-..+
T Consensus         2 ~rI~vl~SG--------~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~-~~~~~r~~~~~~~   72 (216)
T 2ywr_A            2 LKIGVLVSG--------RGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQR-KEFPSKKEFEERM   72 (216)
T ss_dssp             EEEEEEECS--------CCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCG-GGSSSHHHHHHHH
T ss_pred             CEEEEEEeC--------CcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCc-ccccchhhhhHHH
Confidence            689888652        22567888999988887  766666554322111111112222221110 0011111123467


Q ss_pred             HHHHHhcCCCEEEECCC
Q 009759          197 ISEVARFKPDIIHASSP  213 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~  213 (526)
                      .+.+++.+||+|++-.+
T Consensus        73 ~~~l~~~~~Dliv~a~y   89 (216)
T 2ywr_A           73 ALELKKKGVELVVLAGF   89 (216)
T ss_dssp             HHHHHHTTCCEEEESSC
T ss_pred             HHHHHhcCCCEEEEeCc
Confidence            78889999999999775

>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}

Probab=87.65  E-value=1.8  Score=38.10  Aligned_cols=87  Identities=16%  Similarity=0.151  Sum_probs=47.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHC--CCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      |||+++...        .+..+..++++|.+.  +++|..+.++.............+++.+.... ..+...-.+-..+
T Consensus         4 ~ki~vl~sG--------~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~-~~~~~~~~~~~~~   74 (212)
T 3av3_A            4 KRLAVFASG--------SGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSP-KDYPSKAAFESEI   74 (212)
T ss_dssp             EEEEEECCS--------SCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCG-GGSSSHHHHHHHH
T ss_pred             cEEEEEEEC--------CcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCc-ccccchhhhHHHH
Confidence            688888642        224677888888877  68887777654322111111111222221110 0000111123467


Q ss_pred             HHHHHhcCCCEEEECCCc
Q 009759          197 ISEVARFKPDIIHASSPG  214 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~  214 (526)
                      .+.+++.+||+|++-.+.
T Consensus        75 ~~~l~~~~~Dliv~a~y~   92 (212)
T 3av3_A           75 LRELKGRQIDWIALAGYM   92 (212)
T ss_dssp             HHHHHHTTCCEEEESSCC
T ss_pred             HHHHHhcCCCEEEEchhh
Confidence            788899999999998753

>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A

Probab=86.73  E-value=3.9  Score=38.49  Aligned_cols=80  Identities=21%  Similarity=0.170  Sum_probs=45.5

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc----ccC------ceeccccccCCCcccc
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE----FYG------AKLIGSRSFPCPWYQK  185 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~----~~~------~~~~~~~~~~~~~~~~  185 (526)
                      +++|||+|+...          .......++|.+.||+|..+.+....+..    ...      ....+++.+....   
T Consensus         1 s~~mrIvf~Gt~----------~fa~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~---   67 (314)
T 1fmt_A            1 SESLRIIFAGTP----------DFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVS---   67 (314)
T ss_dssp             CCCCEEEEEECS----------HHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSC---
T ss_pred             CCCCEEEEEecC----------HHHHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCC---
Confidence            356999999652          44556667777789999877665322110    000      0011122111110   


Q ss_pred             ccchhcccHHHHHHHHhcCCCEEEECCC
Q 009759          186 VPLSLALSPRIISEVARFKPDIIHASSP  213 (526)
Q Consensus       186 ~~~~~~~~~~l~~~l~~~~pDiV~~~~~  213 (526)
                          + ....+.+.+++.+||++++-.+
T Consensus        68 ----~-~~~~~~~~l~~~~~Dliv~~~y   90 (314)
T 1fmt_A           68 ----L-RPQENQQLVAELQADVMVVVAY   90 (314)
T ss_dssp             ----S-CSHHHHHHHHHTTCSEEEEESC
T ss_pred             ----C-CCHHHHHHHHhcCCCEEEEeec
Confidence                0 0246778889999999998765

>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1

Probab=86.38  E-value=4.3  Score=32.97  Aligned_cols=45  Identities=22%  Similarity=0.245  Sum_probs=34.7

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeE-EEEEeCCC
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEV-MVVTTHEG  162 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V-~vi~~~~~  162 (526)
                      ...||++|+....|+  ..-.....+.++.++.+.||+| .|+...++
T Consensus        10 ~~~~~~~ivv~~~Py--g~~~a~~Al~~A~aala~g~eV~~VFf~~DG   55 (140)
T 2d1p_A           10 HGSMRFAIVVTGPAY--GTQQASSAFQFAQALIADGHELSSVFFYREG   55 (140)
T ss_dssp             -CCCEEEEEECSCSS--SSSHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred             CCceEEEEEEcCCCC--CcHHHHHHHHHHHHHHHCCCccCEEEEechH
Confidence            456999999887554  3445577899999999999999 88876654

>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0

Probab=86.19  E-value=1.5  Score=38.67  Aligned_cols=86  Identities=12%  Similarity=0.133  Sum_probs=47.8

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHC--CCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcc
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLAL  192 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (526)
                      +.+++||+++..        |.+.-+..+++++.+.  +++|..+.++.............+++.+..+.. .    + .
T Consensus         5 ~~~~~ri~vl~S--------G~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~-~----~-~   70 (215)
T 3kcq_A            5 MKKELRVGVLIS--------GRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRK-P----L-D   70 (215)
T ss_dssp             --CCEEEEEEES--------SCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBT-T----B-C
T ss_pred             CCCCCEEEEEEE--------CCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcc-c----C-C
Confidence            455679998875        3335677888887654  367777776543221111111122222211110 0    0 0


Q ss_pred             cHHHHHHHHhcCCCEEEECCCc
Q 009759          193 SPRIISEVARFKPDIIHASSPG  214 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~~~  214 (526)
                      ...+.+.+++.+||+|++-.+.
T Consensus        71 ~~~~~~~L~~~~~Dlivlagy~   92 (215)
T 3kcq_A           71 IEHISTVLREHDVDLVCLAGFM   92 (215)
T ss_dssp             HHHHHHHHHHTTCSEEEESSCC
T ss_pred             hHHHHHHHHHhCCCEEEEeCCc
Confidence            1578889999999999998753

>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}

Probab=85.64  E-value=10  Score=35.95  Aligned_cols=227  Identities=8%  Similarity=0.027  Sum_probs=106.5

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHH
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (526)
                      +++|+++.....  ...-.......+-+++.+.|+++.++.......                          .....+.
T Consensus         3 ~~~Ig~i~p~~~--~~~f~~~~~~g~~~~a~~~g~~~~~~~~~~~~~--------------------------~~~~~i~   54 (350)
T 3h75_A            3 LTSVVFLNPGNS--TETFWVSYSQFMQAAARDLGLDLRILYAERDPQ--------------------------NTLQQAR   54 (350)
T ss_dssp             CCEEEEEECSCT--TCHHHHHHHHHHHHHHHHHTCEEEEEECTTCHH--------------------------HHHHHHH
T ss_pred             CCEEEEECCCCC--CChHHHHHHHHHHHHHHHcCCeEEEEECCCCHH--------------------------HHHHHHH
Confidence            468999976421  102234556677778888899999885432210                          0112445


Q ss_pred             HHHHh-cCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHh-hcCcEEEeCCh-
Q 009759          198 SEVAR-FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLH-RAADLTLVPSV-  274 (526)
Q Consensus       198 ~~l~~-~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ad~ii~~S~-  274 (526)
                      .++.+ .++|.|++..........+..+...++|+|+...............          ...-+ ...+.|.+... 
T Consensus        55 ~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~----------~~~~~~~~~~~V~~D~~~  124 (350)
T 3h75_A           55 ELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSPLTLDQRELIGQ----------SRQNYSDWIGSMVGDDEE  124 (350)
T ss_dssp             HHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESCCCTTTC----------------------CEEEEECCHHH
T ss_pred             HHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCCCChHHHhhhcC----------CchhccceeeeecCChHH
Confidence            55555 6999887764322222233345567999987655432211000000          00000 00222222221 


Q ss_pred             ---hHHHHHHHhcc---cCC-CcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHh
Q 009759          275 ---AIGKDLEAARV---TAA-NKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDR  347 (526)
Q Consensus       275 ---~~~~~l~~~~~---~~~-~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~  347 (526)
                         ...+.+.+.+.   ... .++.++....+..  .........+..+.............+.....++...+.+.+..
T Consensus       125 ~g~~a~~~L~~~g~~~~~g~~~~i~~i~g~~~~~--~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~  202 (350)
T 3h75_A          125 AGYRMLKELLHKLGPVPAGHGIELLAFSGLKVTP--AAQLRERGLRRALAEHPQVHLRQLVYGEWNRERAYRQAQQLLKR  202 (350)
T ss_dssp             HHHHHHHHHHHHHCCCCSSCCEEEEEEESCTTSH--HHHHHHHHHHHHHHHCTTEEEEEEEECTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhcCCCCceEEEEeCCCCCH--HHHHHHHHHHHHHHHCCCeEEEEEeeCCCcHHHHHHHHHHHHHh
Confidence               22334444430   001 3555554221110  00001111222221111112233556777778888888888888


Q ss_pred             CCCcEEEEEeCCccH----HHHHHHhcC--CCeEEecccChhh
Q 009759          348 LPEARIAFIGDGPYR----EELEKMFTG--MPAVFTGMLLGEE  384 (526)
Q Consensus       348 l~~~~l~ivG~g~~~----~~l~~l~~~--~~V~~~g~v~~~~  384 (526)
                      .+++..+++.+....    ..+++.-..  ..|.+.|+=....
T Consensus       203 ~~~~~aI~~~~d~~a~g~~~al~~~G~~vP~di~vvg~d~~~~  245 (350)
T 3h75_A          203 YPKTQLVWSANDEMALGAMQAARELGRKPGTDLLFSGVNSSPE  245 (350)
T ss_dssp             CTTEEEEEESSHHHHHHHHHHHHHTTCCBTTTBEEEEESCCHH
T ss_pred             CCCcCEEEECChHHHHHHHHHHHHcCCCCCCCeEEEecCCCHH
Confidence            888888888754322    222222212  1477888743333

>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}

Probab=85.15  E-value=21  Score=32.62  Aligned_cols=187  Identities=12%  Similarity=-0.002  Sum_probs=94.4

Q ss_pred             CCCcEEEEEeccCCC-CccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccH
Q 009759          116 SRPRRIALFVEPSPF-SYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSP  194 (526)
Q Consensus       116 ~~~mkIliv~~~~p~-~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (526)
                      .+..+|+++...... ....-....+..+.+++.+.|+++.++....  ...                          ..
T Consensus         4 ~~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~--~~~--------------------------~~   55 (294)
T 3qk7_A            4 GRTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDEP--GEK--------------------------YQ   55 (294)
T ss_dssp             -CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEEEECT--TCC--------------------------CH
T ss_pred             CccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEEeCCC--hhh--------------------------HH
Confidence            344689888752110 1111234556777888899999999987642  110                          12


Q ss_pred             HHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCCh
Q 009759          195 RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV  274 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~  274 (526)
                      .+.+.+...++|-|++....... ..+......++|+|+.-+.....                       ..+.|.+-..
T Consensus        56 ~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~-----------------------~~~~V~~D~~  111 (294)
T 3qk7_A           56 SLIHLVETRRVDALIVAHTQPED-FRLQYLQKQNFPFLALGRSHLPK-----------------------PYAWFDFDNH  111 (294)
T ss_dssp             HHHHHHHHTCCSEEEECSCCSSC-HHHHHHHHTTCCEEEESCCCCSS-----------------------CCEEEEECHH
T ss_pred             HHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHhCCCCEEEECCCCCCC-----------------------CCCEEEcChH
Confidence            45566667799988886532211 22333456789998754432110                       1222322222


Q ss_pred             h----HHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcC-CCCCCcEEEEEecccccccHHHHHHHHHhCC
Q 009759          275 A----IGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP  349 (526)
Q Consensus       275 ~----~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~  349 (526)
                      .    ..+.+.+.+   ..++.++....+..  .........+..+.. +.+-....+..+......+.+.+.+.+...+
T Consensus       112 ~~~~~a~~~L~~~G---~~~I~~i~~~~~~~--~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  186 (294)
T 3qk7_A          112 AGASLAVKRLLELG---HQRIAFVSTDARIS--YVDQRLQGYVQTMSEAGLMPLAGYLQKADPTRPGGYLAASRLLALEV  186 (294)
T ss_dssp             HHHHHHHHHHHHTT---CCCEEEEEESSCCH--HHHHHHHHHHHHHHTTTCCCCTTCEEEECSSHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHHHHCC---CceEEEEeCCcccc--hHHHHHHHHHHHHHHCCCCCChhHeecCCCCHHHHHHHHHHHHcCCC
Confidence            1    223344433   24666654322110  000011111111111 1111122345567777778888888887767


Q ss_pred             CcEEEEEeCC
Q 009759          350 EARIAFIGDG  359 (526)
Q Consensus       350 ~~~l~ivG~g  359 (526)
                      +...+++.+.
T Consensus       187 ~~~ai~~~nd  196 (294)
T 3qk7_A          187 PPTAIITDCN  196 (294)
T ss_dssp             CCSEEEESSH
T ss_pred             CCcEEEECCH
Confidence            7777777754

>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}

Probab=84.78  E-value=13  Score=29.40  Aligned_cols=108  Identities=19%  Similarity=0.223  Sum_probs=67.6

Q ss_pred             CcEEEEEeCCc-cHHHHHHHhcCCCeEEecccChhhHHHHHHc---CcEEEecCCC-C-CCcHHHHHHHH--cCCcEEEe
Q 009759          350 EARIAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYAS---GDVFVMPSES-E-TLGLVVLEAMS--SGIPVVGV  421 (526)
Q Consensus       350 ~~~l~ivG~g~-~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~---aDv~v~ps~~-e-~~~~~ilEAma--~G~PvI~~  421 (526)
                      ..+++|+.+.+ ....+.......+..+...-+.++....+..   .|++|+-... + .-|..+++.+.  .++|+|.-
T Consensus         5 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~l   84 (140)
T 3h5i_A            5 DKKILIVEDSKFQAKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFL   84 (140)
T ss_dssp             -CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEE
T ss_pred             CcEEEEEeCCHHHHHHHHHHHHHcCCEEEEecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEE
Confidence            35677777543 3445555555445555444455666666643   5888875543 3 45666666554  46788754


Q ss_pred             C-CCC---CCceecccCCCceeEeeCCCCHHHHHHHHHHhhhC
Q 009759          422 R-AGG---IPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  460 (526)
Q Consensus       422 ~-~gg---~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d  460 (526)
                      . ...   ..+.+   +.|..+++..+.+.+++.++|..+++.
T Consensus        85 s~~~~~~~~~~~~---~~g~~~~l~KP~~~~~l~~~i~~~l~~  124 (140)
T 3h5i_A           85 TAHTEPAVVEKIR---SVTAYGYVMKSATEQVLITIVEMALRL  124 (140)
T ss_dssp             ESSSSCCCCGGGG---GSCEEEEEETTCCHHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHH---hCCCcEEEeCCCCHHHHHHHHHHHHHH
Confidence            3 222   22334   568889999999999999999988753

>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*

Probab=84.44  E-value=1.4  Score=38.98  Aligned_cols=88  Identities=15%  Similarity=0.149  Sum_probs=47.5

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHH-CCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccH
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLRE-MGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSP  194 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (526)
                      ..+|||+++.+.        .+..+..+++++.+ .+++|..+..+... .........+++.+.... ........+-.
T Consensus        10 ~~~~ri~vl~SG--------~gsnl~all~~~~~~~~~eI~~Vis~~~a-~~~~~A~~~gIp~~~~~~-~~~~~r~~~d~   79 (215)
T 3da8_A           10 SAPARLVVLASG--------TGSLLRSLLDAAVGDYPARVVAVGVDREC-RAAEIAAEASVPVFTVRL-ADHPSRDAWDV   79 (215)
T ss_dssp             CSSEEEEEEESS--------CCHHHHHHHHHSSTTCSEEEEEEEESSCC-HHHHHHHHTTCCEEECCG-GGSSSHHHHHH
T ss_pred             CCCcEEEEEEeC--------ChHHHHHHHHHHhccCCCeEEEEEeCCch-HHHHHHHHcCCCEEEeCc-ccccchhhhhH
Confidence            456899998752        23556777777644 34578777766542 111111122222222211 11111112235


Q ss_pred             HHHHHHHhcCCCEEEECCC
Q 009759          195 RIISEVARFKPDIIHASSP  213 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~~  213 (526)
                      .+.+.+++.+||+|++-.+
T Consensus        80 ~~~~~l~~~~~Dlivlagy   98 (215)
T 3da8_A           80 AITAATAAHEPDLVVSAGF   98 (215)
T ss_dssp             HHHHHHHTTCCSEEEEEEC
T ss_pred             HHHHHHHhhCCCEEEEcCc
Confidence            6788899999999998765

>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}

Probab=84.26  E-value=3.6  Score=38.72  Aligned_cols=81  Identities=17%  Similarity=0.162  Sum_probs=45.9

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc----ccC------ceeccccccCCCcccc
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE----FYG------AKLIGSRSFPCPWYQK  185 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~----~~~------~~~~~~~~~~~~~~~~  185 (526)
                      .++|||+|+...          .......++|.+.||+|..+.+....+..    ...      ....+++.+....   
T Consensus         5 ~~~mrivf~Gt~----------~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~---   71 (318)
T 3q0i_A            5 SQSLRIVFAGTP----------DFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPEN---   71 (318)
T ss_dssp             --CCEEEEECCS----------HHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSC---
T ss_pred             ccCCEEEEEecC----------HHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCc---
Confidence            357999988542          45667778888889999877765432110    000      0011122111110   


Q ss_pred             ccchhcccHHHHHHHHhcCCCEEEECCCc
Q 009759          186 VPLSLALSPRIISEVARFKPDIIHASSPG  214 (526)
Q Consensus       186 ~~~~~~~~~~l~~~l~~~~pDiV~~~~~~  214 (526)
                          + ....+.+.+++.+||++++..+.
T Consensus        72 ----~-~~~~~~~~l~~~~~Dliv~~~y~   95 (318)
T 3q0i_A           72 ----F-KSDESKQQLAALNADLMVVVAYG   95 (318)
T ss_dssp             ----S-CSHHHHHHHHTTCCSEEEESSCC
T ss_pred             ----C-CCHHHHHHHHhcCCCEEEEeCcc
Confidence                1 11367788999999999997753

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=83.32  E-value=4  Score=35.79  Aligned_cols=35  Identities=9%  Similarity=0.051  Sum_probs=26.4

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEG  162 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~  162 (526)
                      |||++.         ||.+..-..+++.|.+.|++|.++.....
T Consensus         1 M~ilIt---------GatG~iG~~l~~~L~~~g~~V~~~~R~~~   35 (219)
T 3dqp_A            1 MKIFIV---------GSTGRVGKSLLKSLSTTDYQIYAGARKVE   35 (219)
T ss_dssp             CEEEEE---------STTSHHHHHHHHHHTTSSCEEEEEESSGG
T ss_pred             CeEEEE---------CCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            788666         44445557789999999999999986543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=83.23  E-value=3  Score=32.21  Aligned_cols=92  Identities=11%  Similarity=0.009  Sum_probs=47.0

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCC-CeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMG-DEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      .|||+++         |+ +..-..+++.|.+.| ++|.++..+.........   .+....        .........+
T Consensus         5 ~~~v~I~---------G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~---~~~~~~--------~~d~~~~~~~   63 (118)
T 3ic5_A            5 RWNICVV---------GA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR---MGVATK--------QVDAKDEAGL   63 (118)
T ss_dssp             CEEEEEE---------CC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT---TTCEEE--------ECCTTCHHHH
T ss_pred             cCeEEEE---------CC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh---CCCcEE--------EecCCCHHHH
Confidence            3678766         23 344567888899999 898887654321111100   000000        0111111233


Q ss_pred             HHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEE
Q 009759          197 ISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV  232 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v  232 (526)
                      .+.++  ++|+|+...+..........+...+++++
T Consensus        64 ~~~~~--~~d~vi~~~~~~~~~~~~~~~~~~g~~~~   97 (118)
T 3ic5_A           64 AKALG--GFDAVISAAPFFLTPIIAKAAKAAGAHYF   97 (118)
T ss_dssp             HHHTT--TCSEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred             HHHHc--CCCEEEECCCchhhHHHHHHHHHhCCCEE
Confidence            44443  78988877654444444444555666654

>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*

Probab=83.14  E-value=16  Score=32.76  Aligned_cols=183  Identities=8%  Similarity=0.016  Sum_probs=91.0

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      .+|+++....   ...-.......+.+++.+.|+++.++.......                           ......+
T Consensus         3 ~~Igvi~~~~---~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~---------------------------~~~~~~~   52 (272)
T 3o74_A            3 RTLGFILPDL---ENPSYARIAKQLEQGARARGYQLLIASSDDQPD---------------------------SERQLQQ   52 (272)
T ss_dssp             CEEEEEESCT---TCHHHHHHHHHHHHHHHHTTCEEEEEECTTCHH---------------------------HHHHHHH
T ss_pred             eEEEEEeCCC---cChhHHHHHHHHHHHHHHCCCEEEEEeCCCCHH---------------------------HHHHHHH
Confidence            5788887532   112344566778888899999999886543210                           0123444


Q ss_pred             HHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChh---
Q 009759          199 EVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVA---  275 (526)
Q Consensus       199 ~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~---  275 (526)
                      .+...++|.|++..........+......++|+|+.-......                       ..+.|.+-...   
T Consensus        53 ~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~-----------------------~~~~V~~d~~~~~~  109 (272)
T 3o74_A           53 LFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRLDPA-----------------------HFCSVISDDRDASR  109 (272)
T ss_dssp             HHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSCCCTT-----------------------TCEEEEECHHHHHH
T ss_pred             HHHHcCCCEEEEecCccccHHHHHHHHHcCCCEEEEccCCCcc-----------------------ccCEEEEchHHHHH
Confidence            4555689988886532111112233456799998754332110                       12223222222   


Q ss_pred             -HHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhCC-CcEE
Q 009759          276 -IGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLP-EARI  353 (526)
Q Consensus       276 -~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~-~~~l  353 (526)
                       ..+.+.+.+   ..++.++....+..  .........+..+.. ..-....+..+......+.+.+.+.+...+ +...
T Consensus       110 ~a~~~L~~~G---~~~i~~i~~~~~~~--~~~~R~~gf~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~a  183 (272)
T 3o74_A          110 QLAASLLSSA---PRSIALIGARPELS--VSQARAGGFDEALQG-YTGEVRRYQGEAFSRECGQRLMQQLIDDLGGLPDA  183 (272)
T ss_dssp             HHHHHHHTTC---CSEEEEEEECTTSH--HHHHHHHHHHHHTTT-CCSEEEEEEESSSSHHHHHHHHHHHHHHHTSCCSE
T ss_pred             HHHHHHHHCC---CcEEEEEecCCCCc--cHHHHHHHHHHHHHH-cCCChheeecCCCCHHHHHHHHHHHHhcCCCCCcE
Confidence             223333333   24566554321110  000011111111211 111223445566677777777777777766 6777


Q ss_pred             EEEeCCc
Q 009759          354 AFIGDGP  360 (526)
Q Consensus       354 ~ivG~g~  360 (526)
                      +++.++.
T Consensus       184 i~~~~d~  190 (272)
T 3o74_A          184 LVTTSYV  190 (272)
T ss_dssp             EEESSHH
T ss_pred             EEEeCch
Confidence            7777543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=83.09  E-value=2.7  Score=38.67  Aligned_cols=33  Identities=6%  Similarity=0.024  Sum_probs=24.5

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEe
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTT  159 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~  159 (526)
                      +|||++.         ||.+..-..+++.|.++||+|.++..
T Consensus         5 ~m~ilVt---------GatG~iG~~l~~~L~~~g~~V~~~~r   37 (287)
T 3sc6_A            5 KERVIIT---------GANGQLGKQLQEELNPEEYDIYPFDK   37 (287)
T ss_dssp             CEEEEEE---------STTSHHHHHHHHHSCTTTEEEEEECT
T ss_pred             eeEEEEE---------CCCCHHHHHHHHHHHhCCCEEEEecc
Confidence            3677665         44445566788999999999998865

>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}

Probab=82.90  E-value=8.5  Score=30.60  Aligned_cols=108  Identities=16%  Similarity=0.206  Sum_probs=66.9

Q ss_pred             cEEEEEeCCc-cHHHHHHHhcCCCeEEecccChhhHHHHHH----cCcEEEecCC-CCCCcHHHHHHHH---cCCcEEEe
Q 009759          351 ARIAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYA----SGDVFVMPSE-SETLGLVVLEAMS---SGIPVVGV  421 (526)
Q Consensus       351 ~~l~ivG~g~-~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~----~aDv~v~ps~-~e~~~~~ilEAma---~G~PvI~~  421 (526)
                      .+++|+.+.+ ..+.++......+..+...-+.++....+.    ..|++|+-.. .+.-|..+++.+.   ..+|+|..
T Consensus         4 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~l   83 (143)
T 3jte_A            4 AKILVIDDESTILQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIIL   83 (143)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEE
T ss_pred             CEEEEEcCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEE
Confidence            4667777543 344555555544444443444456666665    5688887544 3445666666554   36777654


Q ss_pred             C-CCCC---CceecccCCCceeEeeCCCCHHHHHHHHHHhhhCH
Q 009759          422 R-AGGI---PDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQ  461 (526)
Q Consensus       422 ~-~gg~---~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~  461 (526)
                      . ....   .+.+   +.|..+++..+.+.+++..+|..+++..
T Consensus        84 s~~~~~~~~~~~~---~~g~~~~l~kp~~~~~l~~~l~~~~~~~  124 (143)
T 3jte_A           84 TGHGDLDNAILAM---KEGAFEYLRKPVTAQDLSIAINNAINRK  124 (143)
T ss_dssp             ECTTCHHHHHHHH---HTTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred             ECCCCHHHHHHHH---HhCcceeEeCCCCHHHHHHHHHHHHHHH
Confidence            3 3322   2334   6678899999999999999999987643

>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A

Probab=82.73  E-value=2.3  Score=34.08  Aligned_cols=42  Identities=26%  Similarity=0.390  Sum_probs=33.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeE-EEEEeCCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEV-MVVTTHEG  162 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V-~vi~~~~~  162 (526)
                      ||++|+....|+  ..-.....+.++.++.+.||+| .|+...++
T Consensus         1 mk~~iiv~~~p~--~~~~~~~al~~a~a~~~~g~~v~~vff~~dG   43 (130)
T 2hy5_A            1 MKFALQINEGPY--QHQASDSAYQFAKAALEKGHEIFRVFFYHDG   43 (130)
T ss_dssp             CEEEEEECSCTT--TSTHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred             CEEEEEEeCCCC--CcHHHHHHHHHHHHHHhcCCeeCEEEEechH
Confidence            799999887554  2345567899999999999999 88877654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=82.61  E-value=11  Score=33.09  Aligned_cols=34  Identities=21%  Similarity=0.178  Sum_probs=26.6

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHE  161 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~  161 (526)
                      |||++.         ||.+..-..+++.|.+.|++|.++....
T Consensus         5 ~~ilIt---------GatG~iG~~l~~~L~~~g~~V~~~~r~~   38 (227)
T 3dhn_A            5 KKIVLI---------GASGFVGSALLNEALNRGFEVTAVVRHP   38 (227)
T ss_dssp             CEEEEE---------TCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred             CEEEEE---------cCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence            677655         5556667789999999999999987654

>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}

Probab=82.49  E-value=3.3  Score=36.31  Aligned_cols=88  Identities=18%  Similarity=0.257  Sum_probs=48.4

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCC--CeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHH
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMG--DEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      ++||+++..        |.+.-+..+++++.+.+  ++|..+.++..........+..+++.+..+. ..+.....+-..
T Consensus         7 ~~ri~vl~S--------G~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~-~~~~~r~~~d~~   77 (209)
T 4ds3_A            7 RNRVVIFIS--------GGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR-KDFASKEAHEDA   77 (209)
T ss_dssp             CEEEEEEES--------SCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG-GGSSSHHHHHHH
T ss_pred             CccEEEEEE--------CCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc-cccCCHHHHHHH
Confidence            578988875        33356788888887643  6777777654322111111112222221111 000111112357


Q ss_pred             HHHHHHhcCCCEEEECCCc
Q 009759          196 IISEVARFKPDIIHASSPG  214 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~~  214 (526)
                      +.+.+++.+||+|++-.+.
T Consensus        78 ~~~~l~~~~~Dliv~agy~   96 (209)
T 4ds3_A           78 ILAALDVLKPDIICLAGYM   96 (209)
T ss_dssp             HHHHHHHHCCSEEEESSCC
T ss_pred             HHHHHHhcCCCEEEEeccc
Confidence            7888999999999998753

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=82.28  E-value=1.5  Score=40.94  Aligned_cols=34  Identities=21%  Similarity=0.198  Sum_probs=27.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHE  161 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~  161 (526)
                      |||++.         ||.+..-..|++.|.++||+|++++.+.
T Consensus         1 MkILVT---------GatGfIG~~L~~~L~~~G~~V~~l~R~~   34 (298)
T 4b4o_A            1 MRVLVG---------GGTGFIGTALTQLLNARGHEVTLVSRKP   34 (298)
T ss_dssp             CEEEEE---------TTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CEEEEE---------CCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence            898655         5666677889999999999999997543

>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}

Probab=82.25  E-value=15  Score=28.86  Aligned_cols=108  Identities=16%  Similarity=0.122  Sum_probs=65.7

Q ss_pred             CcEEEEEeCCc-cHHHHHHHhcCCCeEEecccChhhHHHHHHc--CcEEEecCC-CCCCcHHHHHHHHc-----CCcEEE
Q 009759          350 EARIAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAMSS-----GIPVVG  420 (526)
Q Consensus       350 ~~~l~ivG~g~-~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~--aDv~v~ps~-~e~~~~~ilEAma~-----G~PvI~  420 (526)
                      ..+++|+.+.+ ....++....+.+..+.-.-+.++..+.+..  .|++|+-.. .+.-|..+++.+..     .+|+|.
T Consensus         6 ~~~iLivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~   85 (140)
T 3grc_A            6 RPRILICEDDPDIARLLNLMLEKGGFDSDMVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVV   85 (140)
T ss_dssp             CSEEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEE
T ss_pred             CCCEEEEcCCHHHHHHHHHHHHHCCCeEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEE
Confidence            34666666543 3344444444444333333333555555543  478877544 34556777777764     678876


Q ss_pred             eCCCC----CC-ceecccCCCceeEeeCCCCHHHHHHHHHHhhhC
Q 009759          421 VRAGG----IP-DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYN  460 (526)
Q Consensus       421 ~~~gg----~~-e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d  460 (526)
                      -....    .. +.+   +.|..+++..+.+.+++.++|..+++.
T Consensus        86 ~s~~~~~~~~~~~~~---~~g~~~~l~kP~~~~~l~~~i~~~l~~  127 (140)
T 3grc_A           86 VSANAREGELEFNSQ---PLAVSTWLEKPIDENLLILSLHRAIDN  127 (140)
T ss_dssp             ECTTHHHHHHHHCCT---TTCCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred             EecCCChHHHHHHhh---hcCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence            54322    11 334   667889999999999999999988763

>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}

Probab=82.20  E-value=27  Score=31.95  Aligned_cols=221  Identities=10%  Similarity=0.012  Sum_probs=107.7

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      ++.+|+++....   ...-.......+-+++.+.|+++.++........                          .....
T Consensus         3 ~~~~I~~i~~~~---~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~--------------------------~~~~~   53 (305)
T 3g1w_A            3 LNETYMMITFQS---GMDYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQ--------------------------EQITV   53 (305)
T ss_dssp             --CEEEEEESST---TSTHHHHHHHHHHHHHHHHTCEEEEEECSSSCHH--------------------------HHHHH
T ss_pred             CCceEEEEEccC---CChHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHH--------------------------HHHHH
Confidence            456898887642   2223445567788888889999998643221100                          01133


Q ss_pred             HHHHHhcCCCEEEECCCchH-HHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCCh-
Q 009759          197 ISEVARFKPDIIHASSPGIM-VFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSV-  274 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~~~-~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~-  274 (526)
                      .+.+...++|.|++...... ....+......++|+|+.-......                      ...+.|.+... 
T Consensus        54 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~----------------------~~~~~V~~d~~~  111 (305)
T 3g1w_A           54 LEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGAPDS----------------------HAHSFLGTNNYN  111 (305)
T ss_dssp             HHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCTTS----------------------CCSCEEECCHHH
T ss_pred             HHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECCCCCCC----------------------ceeEEECcCHHH
Confidence            34444569998888653322 1222333456799988754332110                      01222222222 


Q ss_pred             ---hHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhc-CCCCCCcEEEEEecccccccHHHHHHHHHhCCC
Q 009759          275 ---AIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLS-NGEPDKPLIVHVGRLGVEKSLDFLKRVMDRLPE  350 (526)
Q Consensus       275 ---~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~  350 (526)
                         ...+.+.+..+ ...++.++. |-.  ...........+..+. ....-....++.|......+...+.+.+...++
T Consensus       112 ~g~~~~~~l~~~~~-g~~~i~~i~-~~~--~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  187 (305)
T 3g1w_A          112 AGMNAAYKMAELLD-GEGEVAVIT-LPN--QLNHQERTTGFKETLEAEFPAIEVIAVEDGRGDSLHSRRVAHQLLEDYPN  187 (305)
T ss_dssp             HHHHHHHHHHHHTT-TCEEEEEEE-CTT--CHHHHHHHHHHHHHHHHHCTTEEEEEEEECTTCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHhC-CCcEEEEEe-CCC--cccHHHHHHHHHHHHHhhCCCCEEEEEecCCCCHHHHHHHHHHHHHhCCC
Confidence               22233444311 124566654 221  1000001111111111 011222334456777778888888888888888


Q ss_pred             cEEEEEeCCccH----HHHHHHhcCCCeEEecccChhhHHHHHHcC
Q 009759          351 ARIAFIGDGPYR----EELEKMFTGMPAVFTGMLLGEELSQAYASG  392 (526)
Q Consensus       351 ~~l~ivG~g~~~----~~l~~l~~~~~V~~~g~v~~~~l~~~~~~a  392 (526)
                      +..+++.++...    ..+++.-....|.+.|+=...+....+..-
T Consensus       188 ~~ai~~~~d~~a~g~~~al~~~g~~~di~vig~d~~~~~~~~~~~~  233 (305)
T 3g1w_A          188 LAGIFATEANGGVGVGDAVRLESRAGEIQIISFDTDKGTLDLVDEG  233 (305)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCTTTSEEEEESCCHHHHHHHHTT
T ss_pred             ceEEEECCCcchhhHHHHHHhcCCCCCeEEEEeCCCHHHHHHHHcC
Confidence            888887754322    222222212257888874434444555433

>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}

Probab=81.81  E-value=9.6  Score=34.86  Aligned_cols=91  Identities=14%  Similarity=0.068  Sum_probs=53.4

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccH
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSP  194 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (526)
                      ..+..+|+++...   ....-....+..+-+++.+.|+++.++.......                           ...
T Consensus         5 ~~~~~~Igvv~~~---~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~---------------------------~~~   54 (291)
T 3egc_A            5 SKRSNVVGLIVSD---IENVFFAEVASGVESEARHKGYSVLLANTAEDIV---------------------------RER   54 (291)
T ss_dssp             --CCCEEEEEESC---TTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHH---------------------------HHH
T ss_pred             cCCCcEEEEEECC---CcchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHH---------------------------HHH
Confidence            3445689998753   1222244556778888899999999886543210                           012


Q ss_pred             HHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEe
Q 009759          195 RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH  236 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h  236 (526)
                      .+.+.+...++|.|++...... ...+......++|+|+.-.
T Consensus        55 ~~~~~l~~~~vdgiIi~~~~~~-~~~~~~~~~~~iPvV~~~~   95 (291)
T 3egc_A           55 EAVGQFFERRVDGLILAPSEGE-HDYLRTELPKTFPIVAVNR   95 (291)
T ss_dssp             HHHHHHHHTTCSEEEECCCSSC-CHHHHHSSCTTSCEEEESS
T ss_pred             HHHHHHHHCCCCEEEEeCCCCC-hHHHHHhhccCCCEEEEec
Confidence            3445556668999888654321 1122233456899987543

>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A

Probab=81.64  E-value=5.7  Score=37.62  Aligned_cols=86  Identities=16%  Similarity=0.054  Sum_probs=47.3

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccC----ceeccccccCCCccccccchhc
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYG----AKLIGSRSFPCPWYQKVPLSLA  191 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  191 (526)
                      .++|||+|+.          .......+.++|.+.||+|..+.+.+........    ....+++.+.....   ...-.
T Consensus        20 ~~~mrIvf~G----------~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~---~~~~~   86 (329)
T 2bw0_A           20 FQSMKIAVIG----------QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRW---RAKGQ   86 (329)
T ss_dssp             -CCCEEEEEC----------CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCC---EETTE
T ss_pred             CCCCEEEEEc----------CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcc---ccccc
Confidence            3459998883          2355556788898999999877664322111000    01112222211111   11112


Q ss_pred             ccHHHHHHHHhcCCCEEEECCCc
Q 009759          192 LSPRIISEVARFKPDIIHASSPG  214 (526)
Q Consensus       192 ~~~~l~~~l~~~~pDiV~~~~~~  214 (526)
                      ....+.+.+++.+||++++-.+.
T Consensus        87 ~~~~~~~~l~~~~~Dliv~a~y~  109 (329)
T 2bw0_A           87 ALPDVVAKYQALGAELNVLPFCS  109 (329)
T ss_dssp             ECHHHHHHHHTTCCSEEEESSCS
T ss_pred             ccHHHHHHHHhcCCCEEEEeehh
Confidence            23567788899999999987753

>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*

Probab=81.63  E-value=4.5  Score=35.57  Aligned_cols=87  Identities=15%  Similarity=0.174  Sum_probs=47.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHC--CCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREM--GDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRI  196 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (526)
                      |||+++...      +|  ..+..+++++.+.  +++|..+.++.............+++.+.... ..+...-.+-..+
T Consensus         1 ~ri~vl~Sg------~g--snl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~-~~~~~r~~~~~~~   71 (212)
T 1jkx_A            1 MNIVVLISG------NG--SNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIA-SAFDSREAYDREL   71 (212)
T ss_dssp             CEEEEEESS------CC--HHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCG-GGCSSHHHHHHHH
T ss_pred             CEEEEEEEC------Cc--HHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCc-ccccchhhccHHH
Confidence            689888752      22  3577888888765  57887777654322111111112222221110 0000111123467


Q ss_pred             HHHHHhcCCCEEEECCCc
Q 009759          197 ISEVARFKPDIIHASSPG  214 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~~~  214 (526)
                      .+.+++.+||+|++..+.
T Consensus        72 ~~~l~~~~~Dliv~agy~   89 (212)
T 1jkx_A           72 IHEIDMYAPDVVVLAGFM   89 (212)
T ss_dssp             HHHHGGGCCSEEEESSCC
T ss_pred             HHHHHhcCCCEEEEeChh
Confidence            888999999999998753

>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}

Probab=81.54  E-value=18  Score=30.28  Aligned_cols=101  Identities=13%  Similarity=0.015  Sum_probs=56.8

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCc-eeccccccCCCccccccchhcccHH
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGA-KLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      ++|||+++.++   .      ...++++..-+ .+-+|+++..+....... +. +++.+.  .    ..  ..-.+...
T Consensus         2 ~~M~vlV~~E~---~------~~~~Ell~~ar-~~g~v~av~~G~~~~~~~-Gad~v~~v~--~----~~--~~e~~a~~   62 (166)
T 3fet_A            2 NAMKFLTVSDD---M------NFLRQVNTLVA-GKGDMDSVIIGEGDAKGL-GSKVLYRAK--K----GT--PFDAVSEG   62 (166)
T ss_dssp             CSEEEEEEESS---H------HHHHHHHHHHG-GGEEEEEEEESCCCCTTC-CCSEEEEEC--T----TC--CHHHHHHH
T ss_pred             CccEEEEEEcC---c------cHHHHHHHhhc-cCCcEEEEEECcchHHHc-CCCEEEEeC--C----CC--ChHHHHHH
Confidence            46999999874   1      23455554433 334788887665422222 22 121111  1    11  11233345


Q ss_pred             HHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecC
Q 009759          196 IISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTH  238 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~  238 (526)
                      +.++++  +||+|++.......-.+-.++.+++.+.+.++-+.
T Consensus        63 l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv~~l  103 (166)
T 3fet_A           63 ILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTATEIFSL  103 (166)
T ss_dssp             HHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_pred             HHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCceeeEEEE
Confidence            555565  99999997654333335557788999998887653

>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}

Probab=80.94  E-value=21  Score=33.40  Aligned_cols=94  Identities=12%  Similarity=0.079  Sum_probs=53.7

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccH
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSP  194 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (526)
                      ..+..+|+++.... .....-....+..+.+++.+.|+++.++.......                           ...
T Consensus        58 ~~~~~~Igvi~~~~-~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~---------------------------~~~  109 (338)
T 3dbi_A           58 AKSTQTLGLVVTNT-LYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAE---------------------------EER  109 (338)
T ss_dssp             --CCSEEEEEECTT-TTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTSHH---------------------------HHH
T ss_pred             hCCCCEEEEEecCC-cccChhHHHHHHHHHHHHHHCCCEEEEEeCCCChH---------------------------HHH
Confidence            44556898887531 01122345567788888999999998876433210                           011


Q ss_pred             HHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEe
Q 009759          195 RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYH  236 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h  236 (526)
                      ...+.+...++|-|++.......-.........++|+|+.-.
T Consensus       110 ~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~  151 (338)
T 3dbi_A          110 QAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNR  151 (338)
T ss_dssp             HHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESS
T ss_pred             HHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEEcC
Confidence            334455556899888865332222223334566899887543

>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1

Probab=80.70  E-value=3.5  Score=33.41  Aligned_cols=39  Identities=10%  Similarity=-0.060  Sum_probs=30.7

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEe
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTT  159 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~  159 (526)
                      .||++++..+   |..--....+..++..|.++||+|+|.+.
T Consensus         6 ~m~~LilLGC---PE~Pvq~p~~lYl~~~Lk~~G~~v~VA~n   44 (157)
T 1kjn_A            6 TGKALMVLGC---PESPVQIPLAIYTSHKLKKKGFRVTVTAN   44 (157)
T ss_dssp             CCEEEEECCC---SCSTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             ceeeeEEecC---CCCcchhhHHHHHHHHHHhcCCeeEEecC
Confidence            4999999765   33344556678899999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	526
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	5e-27
d1rzua_	477	c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte	8e-27
d1uqta_	456	c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA	2e-20
d2iw1a1	370	c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt	1e-16
d2bfwa1	196	c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py	2e-08

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score =  111 bits (277), Expect = 5e-27
 Identities = 80/394 (20%), Positives = 131/394 (33%), Gaps = 38/394 (9%)

Query: 135 GYKNRFQNFIKYLREMGDEVMVVTTHE---GVPQEFYGAKLIGSRSFPCPWYQKVPLSLA 191
            +       I  +R  G+EV V  ++E    +     G  L+ S     P +  +     
Sbjct: 42  SHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAV 101

Query: 192 LSPRIISEVAR------FKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPR 245
              R    +          PD++H      +  GALI  K   +P V + H      +P 
Sbjct: 102 TFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIK-KYFKIPAVFTIHRLNKSKLPA 160

Query: 246 YTFSWLVKPMWL------VIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVD 299
           + F                       AD+    S     D          KI     G+D
Sbjct: 161 FYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGID 220

Query: 300 SESFHPRFRSSEMRWRLSN-----GEPDKPLIVHVGRLGV-EKSLDFLKRVMDRL----- 348
              ++  + +     R  +     G  +    + +GR    +K +D L + ++ L     
Sbjct: 221 CSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKE 280

Query: 349 -PEARIAFIGDGPYREELEKM----FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESET 403
             E R   IG G    E          G   V T ML  E + + Y S D  ++PS  E 
Sbjct: 281 FQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEP 340

Query: 404 LGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL-YNQE 462
            GLV LEAM  G   +    GG+ DII      + G L   GD  +  + +   L  ++ 
Sbjct: 341 FGLVALEAMCLGAIPIASAVGGLRDII----TNETGILVKAGDPGELANAILKALELSRS 396

Query: 463 LRETMGQAARQEMEKYDWRAATRTIRNEQYNAAI 496
                 +  ++    + W  +      + Y  +I
Sbjct: 397 DLSKFRENCKKRAMSFSWEKSAERYV-KAYTGSI 429

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  111 bits (277), Expect = 8e-27
 Identities = 71/469 (15%), Positives = 128/469 (27%), Gaps = 105/469 (22%)

Query: 123 LFV--EPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVT---------------------- 158
           L V  E  P     G  +        L   G     +                       
Sbjct: 4   LSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDL 63

Query: 159 ----------THEGVPQEFYGAKLIGSRS-----------FPCPWYQKVPLSLALSPRII 197
                      HE +      A     RS           +P  W +   LSLA +    
Sbjct: 64  LGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGA 123

Query: 198 SEVARFKPDIIHA-SSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYI-PRYTFSWLVKPM 255
             +  ++PD++HA      M    +  A+   +P +++ H            FS L  P 
Sbjct: 124 GVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183

Query: 256 WL-------------VIKFLHRAADLTLVPSVAI---------GKDLEAARVTAANKIRI 293
                           +K   + A      S +          G  LE    + A+ +  
Sbjct: 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHG 243

Query: 294 WKKGVDSESFHPR------------------FRSSEMRWRLSNGEPDKPLIVHVGR---- 331
              G+D++ ++P                        +       +   PL   + R    
Sbjct: 244 IVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQ 303

Query: 332 LGVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQA--Y 389
            G++   + +  ++       +   GD      L    +         +   E       
Sbjct: 304 KGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQ 363

Query: 390 ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI------GYLFN 443
           A  D  ++PS  E  GL  L A+  G   V  R GG+ D + +     +      G  F+
Sbjct: 364 AGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFS 423

Query: 444 PGD---LDDCLSKLEPLLYNQELRETMGQAARQEMEKYDW-RAATRTIR 488
           P     L   + +     ++ +L   M +   +      W ++A     
Sbjct: 424 PVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAA 470

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

 Score = 91.9 bits (227), Expect = 2e-20
 Identities = 49/354 (13%), Positives = 99/354 (27%), Gaps = 57/354 (16%)

Query: 180 CPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHV 239
              Y +V   LA   +++  +       IH     ++ F   +  + +   I    H   
Sbjct: 102 WDGYLRVNALLA--DKLLPLLQDDDIIWIH--DYHLLPFAHELRKRGVNNRIGFFLHIPF 157

Query: 240 PVYIPRYTFSW--------LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAAN-- 289
           P                      +        R A L  + ++       A   TA    
Sbjct: 158 PTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKA 217

Query: 290 -KIRIWKKGVDSESFHPRFRSSEMRW--RLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMD 346
            +  ++  G++ +    +          +L     +   I  V RL   K L       +
Sbjct: 218 FRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYE 277

Query: 347 RLPE------ARIAFIGDGP-----------YREELEKMFTGMPAVF-----------TG 378
            L E       +I +    P            R +LE     +   +             
Sbjct: 278 ALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQ 337

Query: 379 MLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP-----VVGVRAGGIPDIIPED 433
               + L + +   DV ++    + + LV  E +++  P     +V  +  G  + +   
Sbjct: 338 HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS- 396

Query: 434 QDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYDWRAATRT 486
                  + NP D D+  + L+  L  +   R +        + K D       
Sbjct: 397 -----ALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC 445

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

 Score = 79.6 bits (194), Expect = 1e-16
 Identities = 55/362 (15%), Positives = 110/362 (30%), Gaps = 17/362 (4%)

Query: 135 GYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSP 194
           G +  F      +   G  V V T            K       P   +     +     
Sbjct: 14  GLQRDFMRIASTVAARGHHVRVYTQSWEGDCP----KAFELIQVPVKSHTNHGRNAEYYA 69

Query: 195 RIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKP 254
            + + +     D +   +           A +     V      +     RY      + 
Sbjct: 70  WVQNHLKEHPADRVVGFNKMPG-LDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFER 128

Query: 255 MWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRW 314
                    ++  L ++    I    +  +        +         +  +  +S   +
Sbjct: 129 ATF---EQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIY 185

Query: 315 RLSNGEPDK-PLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIG------DGPYREELEK 367
           R  NG  ++  L++ VG     K +D     +  LPE+            D P + E   
Sbjct: 186 RQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALA 245

Query: 368 MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP 427
              G+ +         ++S+  A+ D+ + P+  E  G+V+LEA+++G+PV+     G  
Sbjct: 246 EKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYA 305

Query: 428 DIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTI 487
             I +   G +  +  P   +     L   L    LR    + AR   +  D  +     
Sbjct: 306 HYIADANCGTV--IAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKA 363

Query: 488 RN 489
            +
Sbjct: 364 AD 365

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 52.5 bits (124), Expect = 2e-08
 Identities = 43/199 (21%), Positives = 73/199 (36%), Gaps = 21/199 (10%)

Query: 297 GVDSESFHPRFRSSEMRWRLSN-----GEPDKPLIVHVGRLGV-EKSLDFLKRVMDR--- 347
           G+D   ++  + +     R  +     G  +    + +GR    +K +D L + ++    
Sbjct: 1   GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 60

Query: 348 ---LPEARIAFIGDGPYREELEKMFTGMP----AVFTGMLLGEELSQAYASGDVFVMPSE 400
                E R   IG G    E              V T ML  E + + Y S D  ++PS 
Sbjct: 61  KKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSY 120

Query: 401 SETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLL-Y 459
            E  GLV LEAM  G   +    GG+ DI       + G L   GD  +  + +   L  
Sbjct: 121 FEPFGLVALEAMCLGAIPIASAVGGLRDI----ITNETGILVKAGDPGELANAILKALEL 176

Query: 460 NQELRETMGQAARQEMEKY 478
           ++       +  ++    +
Sbjct: 177 SRSDLSKFRENCKKRAMSF 195

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	526
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	100.0
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	100.0
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	100.0
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.94
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.92
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.91
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	99.57
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	99.35
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	99.3
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	99.3
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	99.28
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	99.22
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	99.16
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	98.8
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	98.72
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	98.6
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	98.48
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	98.27
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	98.27
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	98.26
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	96.39
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.55
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.75
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.41
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	93.38
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.47
d1uana_	227	Hypothetical protein TT1542 {Thermus thermophilus	91.01
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	90.93
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.31
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	90.24
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	89.64
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	89.53
d1kgsa2	122	PhoB receiver domain {Thermotoga maritima [TaxId:	89.39
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	89.27
d2pl1a1	119	PhoP receiver domain {Escherichia coli [TaxId: 562	89.19
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	88.57
d2d1pa1	128	tRNA 2-thiouridine synthesizing protein D, TusD {E	88.51
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	87.62
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	87.53
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	87.42
d1ny5a1	137	Transcriptional activator sigm54 (NtrC1), N-termin	87.38
d1zgza1	120	TorCAD operon transcriptional regulator TorD, N-te	87.23
d2hy5a1	130	Sulfurtransferase DsrE {Chromatium vinosum [TaxId:	87.11
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	87.09
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	86.6
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	86.09
d1gsaa1	122	Prokaryotic glutathione synthetase, N-terminal dom	85.61
d2ayxa1	133	Sensor kinase protein RcsC, C-terminal domain {Esc	85.42
d2a9pa1	117	DNA-binding response regulator MicA, N-terminal do	85.08
d1w25a1	139	Response regulator PleD, receiver domain {Caulobac	84.69
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	84.62
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	84.34
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	83.17
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	82.7
d1dbqa_	282	Purine repressor (PurR), C-terminal domain {Escher	82.5
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	82.45
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	82.33
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	82.32
d1b74a1	105	Glutamate racemase {Aquifex pyrophilus [TaxId: 271	81.77
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	81.4
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	81.25
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	80.98
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	80.73
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	80.53
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	80.16

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.1e-42  Score=357.87  Aligned_cols=372  Identities=18%  Similarity=0.189  Sum_probs=260.7

Q ss_pred             cEEEEEecc-CCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc-------------cc--Cceec-----cccc
Q 009759          119 RRIALFVEP-SPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE-------------FY--GAKLI-----GSRS  177 (526)
Q Consensus       119 mkIliv~~~-~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~-------------~~--~~~~~-----~~~~  177 (526)
                      |||++|+.. +|+...||.+.++..|+++|+++||+|+|+++.++....             ..  ...+.     ++..
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~   80 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL   80 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence            899999754 455567999999999999999999999999875421000             00  00110     1000


Q ss_pred             c-----------CCCcc----ccccch----hcccHHHHHHHH----hcCCCEEEECCCchHHHHH-HHHHHhcCCCEEE
Q 009759          178 F-----------PCPWY----QKVPLS----LALSPRIISEVA----RFKPDIIHASSPGIMVFGA-LIIAKLLCVPIVM  233 (526)
Q Consensus       178 ~-----------~~~~~----~~~~~~----~~~~~~l~~~l~----~~~pDiV~~~~~~~~~~~~-~~~~~~~~~p~v~  233 (526)
                      +           ..+..    ......    ..+.....+++.    .++|||||+|++....... +..++..++|+|+
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~  160 (477)
T d1rzua_          81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLL  160 (477)
T ss_dssp             EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEE
T ss_pred             EEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEE
Confidence            0           00000    000000    111122223333    3589999999864433322 2334566899999


Q ss_pred             EEecCCccccc-cccccc-------------ccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhc---------ccCCCc
Q 009759          234 SYHTHVPVYIP-RYTFSW-------------LVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAAR---------VTAANK  290 (526)
Q Consensus       234 ~~h~~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~---------~~~~~k  290 (526)
                      ++|+....... ......             .........+.....+|.++++|...++......         .....+
T Consensus       161 t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (477)
T d1rzua_         161 TIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHV  240 (477)
T ss_dssp             EESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGG
T ss_pred             EEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhcccc
Confidence            99985322110 000000             0000012356677889999999998877553211         112468


Q ss_pred             EEEeecCCCCCCCCCCcc------------------cHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC--CC
Q 009759          291 IRIWKKGVDSESFHPRFR------------------SSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL--PE  350 (526)
Q Consensus       291 i~vi~ngid~~~~~~~~~------------------~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l--~~  350 (526)
                      +.+|+||+|.+.|+|...                  ....+...++..++.++|+|+||+.++||++.|++++..+  .+
T Consensus       241 ~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~  320 (477)
T d1rzua_         241 LHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLG  320 (477)
T ss_dssp             EEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTT
T ss_pred             EEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhC
Confidence            999999999998876422                  1233445555566778999999999999999999999876  57


Q ss_pred             cEEEEEeCCccHH--HHHHHhc--CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCC
Q 009759          351 ARIAFIGDGPYRE--ELEKMFT--GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGI  426 (526)
Q Consensus       351 ~~l~ivG~g~~~~--~l~~l~~--~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~  426 (526)
                      .+++++|.|+...  .++++..  ..+|.+.|..+.+++..+|++||++|+||.+|+||++++|||+||+|||++++||+
T Consensus       321 ~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~  400 (477)
T d1rzua_         321 GRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGL  400 (477)
T ss_dssp             CEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHH
T ss_pred             CeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCC
Confidence            8999999886433  2333332  33799999999888999999999999999999999999999999999999999999


Q ss_pred             CceecccCCC---------ceeEeeCCCCHHHHHHHHHHhhh---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 009759          427 PDIIPEDQDG---------KIGYLFNPGDLDDCLSKLEPLLY---NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNA  494 (526)
Q Consensus       427 ~e~v~~~~~~---------~~g~~~~~~d~~~la~ai~~ll~---d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~  494 (526)
                      +|++   .++         .+|++++++|+++|+++|.++++   |++.++++++++.+  ++|||++++++++ ++|++
T Consensus       401 ~E~v---~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~-~lY~~  474 (477)
T d1rzua_         401 ADTV---IDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYA-ALYSQ  474 (477)
T ss_dssp             HHHC---CBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHH-HHHHH
T ss_pred             ccee---ecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH--hhCCHHHHHHHHH-HHHHH
Confidence            9999   555         48999999999999999988775   89999999887732  5799999999997 89999


Q ss_pred             HH
Q 009759          495 AI  496 (526)
Q Consensus       495 ~l  496 (526)
                      ++
T Consensus       475 ll  476 (477)
T d1rzua_         475 LI  476 (477)
T ss_dssp             HT
T ss_pred             Hh
Confidence            86

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=100.00  E-value=3.6e-41  Score=342.50  Aligned_cols=372  Identities=21%  Similarity=0.252  Sum_probs=270.5

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc--cCceec--------------cccc--cCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF--YGAKLI--------------GSRS--FPC  180 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~--~~~~~~--------------~~~~--~~~  180 (526)
                      ||||+++..+|....||.++++..|+++|+++||+|+|+++........  ......              .+..  ...
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGG   80 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEES
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecCc
Confidence            9999999887644479999999999999999999999999765432111  000000              0000  000


Q ss_pred             Cccccccc-----------hhccc----HHHHHHHH-hcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCccccc
Q 009759          181 PWYQKVPL-----------SLALS----PRIISEVA-RFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIP  244 (526)
Q Consensus       181 ~~~~~~~~-----------~~~~~----~~l~~~l~-~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~  244 (526)
                      ........           ...+.    ..+..+++ ...||+||+|++.. .+.+.++++..++|+++++|+.......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~-~~~~~~~~~~~~~~~v~~~h~~~~~~~~  159 (437)
T d2bisa1          81 GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT-VFAGALIKKYFKIPAVFTIHRLNKSKLP  159 (437)
T ss_dssp             SGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGG-HHHHHHHHHHHCCCEEEEESSCCCCCEE
T ss_pred             cccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhh-hhHhhhhhccccCceeEEEeeccccccc
Confidence            00000000           00011    11122222 23689999998754 3445667788899999999997654322


Q ss_pred             cccc------ccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCccc-------HH
Q 009759          245 RYTF------SWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRS-------SE  311 (526)
Q Consensus       245 ~~~~------~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~-------~~  311 (526)
                      ....      ..........++.....+|.+++.+..........+.....++.+++||+|.+.+.+....       ..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~  239 (437)
T d2bisa1         160 AFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKS  239 (437)
T ss_dssp             HHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHH
T ss_pred             hhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccchhhHHHHHh
Confidence            1110      0011111134566778899999999988877666655567899999999999988654221       12


Q ss_pred             HHHhhcCCCCCCcEEEEEeccc-ccccHHHHHHHHHhC------CCcEEEEEeCCccH--HHHHHHhcCC--CeEEeccc
Q 009759          312 MRWRLSNGEPDKPLIVHVGRLG-VEKSLDFLKRVMDRL------PEARIAFIGDGPYR--EELEKMFTGM--PAVFTGML  380 (526)
Q Consensus       312 ~~~~~~~~~~~~~~i~~vG~l~-~~Kg~~~li~a~~~l------~~~~l~ivG~g~~~--~~l~~l~~~~--~V~~~g~v  380 (526)
                      .+.++  ...++++++|+|++. +.||++.+++|+..+      ++++|+++|.|+..  ..++.+....  .+.+.|.+
T Consensus       240 ~~~~~--~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (437)
T d2bisa1         240 LLSKF--GMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEML  317 (437)
T ss_dssp             HHHHT--TCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSCC
T ss_pred             hhhhh--hccCCceEEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccccceeccccC
Confidence            23333  345678899999996 479999999999764      57999999988533  2334443333  46788889


Q ss_pred             ChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh-
Q 009759          381 LGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-  459 (526)
Q Consensus       381 ~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-  459 (526)
                      +.+++..+++.||++++||..|++|++++|||+||+|||+++.||..|++   ++ ++|++++++|+++++++|.++++ 
T Consensus       318 ~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i---~~-~~G~~~~~~d~~~la~~i~~ll~~  393 (437)
T d2bisa1         318 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII---TN-ETGILVKAGDPGELANAILKALEL  393 (437)
T ss_dssp             CHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHC---CT-TTCEEECTTCHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCCCcHHhE---EC-CcEEEECCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999998   54 57999999999999999999987 


Q ss_pred             CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Q 009759          460 NQELRETMGQAARQEMEKYDWRAATRTIRNEQYNAAIWF  498 (526)
Q Consensus       460 d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly~~~l~~  498 (526)
                      |++.++++++++++.+++|||++++++++ ++|++++++
T Consensus       394 ~~~~~~~~~~~~~~~~~~~s~~~~a~~~~-~iY~~~i~r  431 (437)
T d2bisa1         394 SRSDLSKFRENCKKRAMSFSWEKSAERYV-KAYTGSIDR  431 (437)
T ss_dssp             TTSCTHHHHHHHHHHHHHSCHHHHHHHHH-HHHHTCSCC
T ss_pred             CHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHh
Confidence            77889999999999988999999999998 899988754

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.5e-37  Score=302.57  Aligned_cols=346  Identities=14%  Similarity=0.130  Sum_probs=243.5

Q ss_pred             EEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHHH
Q 009759          121 IALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISEV  200 (526)
Q Consensus       121 Iliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  200 (526)
                      |+|++..++ | .||+++.+..++++|+++||+|+|++....... ..+.+...+.   ............+...+...+
T Consensus         2 i~f~~~~y~-p-~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   75 (370)
T d2iw1a1           2 VAFCLYKYF-P-FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC-PKAFELIQVP---VKSHTNHGRNAEYYAWVQNHL   75 (370)
T ss_dssp             EEEECSEEC-T-TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC-CTTCEEEECC---CCCSSHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCC-C-CCCHHHHHHHHHHHHHHCCCEEEEEecCCCCCC-CCceEEEEcC---ccccccchhhHHHHHHHHHHH
Confidence            677876542 3 499999999999999999999999986432211 1222322222   111111222233445666778


Q ss_pred             HhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcc-cc---ccccccccc--chHHHHHHH--HhhcCcEEEeC
Q 009759          201 ARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPV-YI---PRYTFSWLV--KPMWLVIKF--LHRAADLTLVP  272 (526)
Q Consensus       201 ~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-~~---~~~~~~~~~--~~~~~~~~~--~~~~ad~ii~~  272 (526)
                      +..++|+||.+.....            ..+. ..++.... ..   .........  .......+.  ....++.+++.
T Consensus        76 ~~~~~d~v~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (370)
T d2iw1a1          76 KEHPADRVVGFNKMPG------------LDVY-FAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMML  142 (370)
T ss_dssp             HHSCCSEEEESSCCTT------------CSEE-ECCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEES
T ss_pred             HhcccceeeecccCch------------HHHH-HHhhcccceeeeeecCccccccchhchhHHHHHHHHhhccCceEEEe
Confidence            8889999998764221            1111 11110000 00   000000000  011112222  23457889999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCc---ccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC-
Q 009759          273 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRF---RSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL-  348 (526)
Q Consensus       273 S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l-  348 (526)
                      ++...+.+.+..+.+..++.+++||+|.+.+.+..   .....+...+. ..++++++++|++.+.||++.+++|++.+ 
T Consensus       143 ~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~  221 (370)
T d2iw1a1         143 TDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGI-KEQQNLLLQVGSDFGRKGVDRSIEALASLP  221 (370)
T ss_dssp             CHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTC-CTTCEEEEEECSCTTTTTHHHHHHHHHTSC
T ss_pred             cHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCC-CccceEEEEEeccccccchhhhcccccccc
Confidence            99888888877777788999999999987654332   23344555544 56788999999999999999999999888 


Q ss_pred             ---CCcEEEEEeCCccHHHHHHHhcC----CCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe
Q 009759          349 ---PEARIAFIGDGPYREELEKMFTG----MPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV  421 (526)
Q Consensus       349 ---~~~~l~ivG~g~~~~~l~~l~~~----~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~  421 (526)
                         ++..+.++|.+...+.+++++++    .++++.|+.  +++.++|++||++|+||..|++|++++|||+||+|||++
T Consensus       222 ~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s  299 (370)
T d2iw1a1         222 ESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTT  299 (370)
T ss_dssp             HHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEE
T ss_pred             cccccceeeeccccccccccccccccccccccccccccc--cccccccccccccccccccccccceeeecccCCeeEEEe
Confidence               35677777766655666665543    268999987  689999999999999999999999999999999999999


Q ss_pred             CCCCCCceecccCCCceeEee-CCCCHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 009759          422 RAGGIPDIIPEDQDGKIGYLF-NPGDLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIRNEQY  492 (526)
Q Consensus       422 ~~gg~~e~v~~~~~~~~g~~~-~~~d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~~~ly  492 (526)
                      +.||.+|++   .++.+|+++ +++|+++++++|.++++|++.+++|+++|+++++.|+|..+.+++. ++|
T Consensus       300 ~~~g~~e~i---~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~~ar~~~~~~~~~~~~~~~~-~ii  367 (370)
T d2iw1a1         300 AVCGYAHYI---ADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAA-DII  367 (370)
T ss_dssp             TTSTTTHHH---HHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHH-HHH
T ss_pred             CCCChHHHh---cCCCceEEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhChhHHHHHHH-HHH
Confidence            999999999   888899765 6789999999999999999999999999999997766666565554 454

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.94  E-value=2.6e-26  Score=205.61  Aligned_cols=177  Identities=24%  Similarity=0.383  Sum_probs=147.6

Q ss_pred             CCCCCCCCCCc-------ccHHHHHhhcCCCCCCcEEEEEeccc-ccccHHHHHHHHHhC------CCcEEEEEeCCcc-
Q 009759          297 GVDSESFHPRF-------RSSEMRWRLSNGEPDKPLIVHVGRLG-VEKSLDFLKRVMDRL------PEARIAFIGDGPY-  361 (526)
Q Consensus       297 gid~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~vG~l~-~~Kg~~~li~a~~~l------~~~~l~ivG~g~~-  361 (526)
                      |||.+.|.+..       ....++.++++  ++.++++|+||+. ++||++.++++++.+      ++++|+++|.|+. 
T Consensus         1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~   78 (196)
T d2bfwa1           1 GIDCSFWNESYLTGSRDERKKSLLSKFGM--DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE   78 (196)
T ss_dssp             CCCTTTSSGGGSCSCHHHHHHHHHHHTTC--CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHH
T ss_pred             CcChhhcCCCCCCchhHHHHHHHHHHhCC--CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccc
Confidence            78899887652       22334455544  6788899999996 589999999999765      5799999998753 


Q ss_pred             -HHHHHHHhcCC--CeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCce
Q 009759          362 -REELEKMFTGM--PAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKI  438 (526)
Q Consensus       362 -~~~l~~l~~~~--~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~  438 (526)
                       ...++.+....  .+.+.|.++.+++..+|+.||++|+|++.|++|++++|||+||+|||+++.|+..|++   .+ .+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i---~~-~~  154 (196)
T d2bfwa1          79 LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII---TN-ET  154 (196)
T ss_dssp             HHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC---CT-TT
T ss_pred             hhhhhhhhhhccceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCccceee---cC-Cc
Confidence             23333333322  4678899999999999999999999999999999999999999999999999999988   44 58


Q ss_pred             eEeeCCCCHHHHHHHHHHhhh-CHHHHHHHHHHHHHHHHhCC
Q 009759          439 GYLFNPGDLDDCLSKLEPLLY-NQELRETMGQAARQEMEKYD  479 (526)
Q Consensus       439 g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~~~a~~~~~~fs  479 (526)
                      |++++++|+++++++|.+++. +++.+++++++|++++++||
T Consensus       155 g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs  196 (196)
T d2bfwa1         155 GILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS  196 (196)
T ss_dssp             CEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred             eeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999887 78999999999999998886

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.5e-24  Score=218.55  Aligned_cols=276  Identities=16%  Similarity=0.107  Sum_probs=207.7

Q ss_pred             CCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeCChhHHHHHHHh
Q 009759          204 KPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIGKDLEAA  283 (526)
Q Consensus       204 ~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~  283 (526)
                      .-|+|++|+++.+.++.++..+..+.++.+.+|..++....-....     ........+-.+|.+...+...++.+...
T Consensus       122 ~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~~fr~lp-----~~~~il~~ll~~d~igf~~~~~~~~fl~~  196 (456)
T d1uqta_         122 DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALP-----TYDTLLEQLCDYDLLGFQTENDRLAFLDC  196 (456)
T ss_dssp             TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTST-----THHHHHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred             CCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCChHHhccCc-----chHHHHHHhhccccccccCHHHHHHHHHH
Confidence            3399999999888888787777788999999999887532211111     11223334457899999998877766532


Q ss_pred             ----cc------------cCCCcEEEeecCCCCCCCCCCc---ccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHH
Q 009759          284 ----RV------------TAANKIRIWKKGVDSESFHPRF---RSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRV  344 (526)
Q Consensus       284 ----~~------------~~~~ki~vi~ngid~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a  344 (526)
                          .+            ....++.++|+|+|.+.|....   ..... ..+.....++++|+++||+++.||++.+++|
T Consensus       197 ~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~-~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A  275 (456)
T d1uqta_         197 LSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKL-AQLKAELKNVQNIFSVERLDYSKGLPERFLA  275 (456)
T ss_dssp             HHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHH-HHHHHHTTTCEEEEEECCBCGGGCHHHHHHH
T ss_pred             HHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHH-HHHHHhcCCCeEEEEeCCCchhhchHHHHHH
Confidence                10            0123677899999987663211   11111 1111123578899999999999999999999


Q ss_pred             HHhC----C----CcEEEEEeCCc---------cHHHHHHHhcC-----------CCeEEecccChhhHHHHHHcCcEEE
Q 009759          345 MDRL----P----EARIAFIGDGP---------YREELEKMFTG-----------MPAVFTGMLLGEELSQAYASGDVFV  396 (526)
Q Consensus       345 ~~~l----~----~~~l~ivG~g~---------~~~~l~~l~~~-----------~~V~~~g~v~~~~l~~~~~~aDv~v  396 (526)
                      ++++    |    ++.++++|.+.         ...++.+++..           ..+.+.+.++.+++..+|+.||+++
T Consensus       276 ~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v  355 (456)
T d1uqta_         276 YEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGL  355 (456)
T ss_dssp             HHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEE
T ss_pred             HHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceee
Confidence            9876    4    35677777542         11223333221           1377889999999999999999999


Q ss_pred             ecCCCCCCcHHHHHHHHcCCc-----EEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh-CHHHHHHHHHH
Q 009759          397 MPSESETLGLVVLEAMSSGIP-----VVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY-NQELRETMGQA  470 (526)
Q Consensus       397 ~ps~~e~~~~~ilEAma~G~P-----vI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~-d~~~~~~~~~~  470 (526)
                      +||..||||++++|||+||+|     +|+|+.+|..+.+   .   +|+++++.|++++|++|.++++ ++++++++.++
T Consensus       356 ~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l---~---~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~  429 (456)
T d1uqta_         356 VTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---T---SALIVNPYDRDEVAAALDRALTMSLAERISRHAE  429 (456)
T ss_dssp             ECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---T---TSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred             cCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHh---C---CeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            999999999999999999999     8999999999988   3   3889999999999999999998 67789999999


Q ss_pred             HHHHHHhCCHHHHHHHHHHHH
Q 009759          471 ARQEMEKYDWRAATRTIRNEQ  491 (526)
Q Consensus       471 a~~~~~~fs~~~~~~~~~~~l  491 (526)
                      +++.+++|++...++.+++++
T Consensus       430 ~~~~v~~~~~~~W~~~fl~~l  450 (456)
T d1uqta_         430 MLDVIVKNDINHWQECFISDL  450 (456)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHH
T ss_pred             HHHHHHHCCHHHHHHHHHHHH
Confidence            999999999999999988554

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.91  E-value=1.6e-24  Score=188.22  Aligned_cols=135  Identities=25%  Similarity=0.441  Sum_probs=119.5

Q ss_pred             cEEEEEecccccccHHHHHHHHHhCCCcEEEEEeCCc---cHHHHHHHhc---CCCeEEecccChhhHHHHHHcCcEEEe
Q 009759          324 PLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFIGDGP---YREELEKMFT---GMPAVFTGMLLGEELSQAYASGDVFVM  397 (526)
Q Consensus       324 ~~i~~vG~l~~~Kg~~~li~a~~~l~~~~l~ivG~g~---~~~~l~~l~~---~~~V~~~g~v~~~~l~~~~~~aDv~v~  397 (526)
                      ..++|+||+.+.||++.+++|++++++.+++++|.+.   ..+.+.+...   ..+|+++|+++++++.++|+.||++|+
T Consensus        13 ~~~l~iGrl~~~K~~~~~i~a~~~l~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~   92 (166)
T d2f9fa1          13 DFWLSVNRIYPEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLC   92 (166)
T ss_dssp             SCEEEECCSSGGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEecCccccCHHHHHHHHHHhcCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccccc
Confidence            4478999999999999999999999999999999653   3333322222   348999999999999999999999999


Q ss_pred             cCCCCCCcHHHHHHHHcCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHH
Q 009759          398 PSESETLGLVVLEAMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQE  462 (526)
Q Consensus       398 ps~~e~~~~~ilEAma~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~  462 (526)
                      ||..|++|++++|||++|+|||+++.++..|++   .++.+|++++. |+++++++|.+++++++
T Consensus        93 ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i---~~~~~g~~~~~-d~~~~~~~i~~l~~~~~  153 (166)
T d2f9fa1          93 TAKDEDFGLTPIEAMASGKPVIAVNEGGFKETV---INEKTGYLVNA-DVNEIIDAMKKVSKNPD  153 (166)
T ss_dssp             CCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHC---CBTTTEEEECS-CHHHHHHHHHHHHHCTT
T ss_pred             ccccccccccccccccccccceeecCCcceeee---cCCcccccCCC-CHHHHHHHHHHHHhCHH
Confidence            999999999999999999999999999999999   88999998765 89999999999999875

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=2.8e-13  Score=131.08  Aligned_cols=322  Identities=16%  Similarity=0.125  Sum_probs=185.5

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccc---cCceeccccc--cCCCccc----cccch
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEF---YGAKLIGSRS--FPCPWYQ----KVPLS  189 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~---~~~~~~~~~~--~~~~~~~----~~~~~  189 (526)
                      +||+|.+.     ..||+-.++..++++|.++||+|.+++...+....+   .+.....+..  +......    .....
T Consensus         1 kkili~~~-----GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (351)
T d1f0ka_           1 KRLMVMAG-----GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRI   75 (351)
T ss_dssp             CEEEEECC-----SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHH
T ss_pred             CEEEEEcC-----CcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccCCcEEEEECCCcCCCCHHHHHHHHHHH
Confidence            48888753     225888889999999999999999998755432111   1111111111  1110000    01111


Q ss_pred             hcccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEE
Q 009759          190 LALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLT  269 (526)
Q Consensus       190 ~~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~i  269 (526)
                      .........++++.++|++........ ......++..++|++...++..+.               ...+.....++.+
T Consensus        76 ~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~a~~~~ip~~~~~~~~~~~---------------~~~~~~~~~~~~~  139 (351)
T d1f0ka_          76 FNAWRQARAIMKAYKPDVVLGMGGYVS-GPGGLAAWSLGIPVVLHEQNGIAG---------------LTNKWLAKIATKV  139 (351)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEECSSTTH-HHHHHHHHHTTCCEEEEECSSSCC---------------HHHHHHTTTCSEE
T ss_pred             HHhHHHHHHHhhccccceeeecccchh-hhhhhhhhhcccceeecccccccc---------------hhHHHhhhhccee
Confidence            223345667788899999988754333 334556788899999877765432               1233445556666


Q ss_pred             EeCChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEe-cccccccHHHHHHHHHhC
Q 009759          270 LVPSVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVG-RLGVEKSLDFLKRVMDRL  348 (526)
Q Consensus       270 i~~S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG-~l~~~Kg~~~li~a~~~l  348 (526)
                      ......           .......+.+...........  .  ..+.. ...++..++.+| ......-.+.+.+.+..+
T Consensus       140 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~--~--~~~~~-~~~~~~~i~~~~gs~g~~~~~~~~~~~~~~l  203 (351)
T d1f0ka_         140 MQAFPG-----------AFPNAEVVGNPVRTDVLALPL--P--QQRLA-GREGPVRVLVVGGSQGARILNQTMPQVAAKL  203 (351)
T ss_dssp             EESSTT-----------SSSSCEECCCCCCHHHHTSCC--H--HHHHT-TCCSSEEEEEECTTTCCHHHHHHHHHHHHHH
T ss_pred             eccccc-----------cccceeEEcCCcccccccchh--H--Hhhhh-cccCCcccccccccchhhhhHHHHHHhhhhh
Confidence            543221           112333444333322222111  1  11111 133444555544 444333346666667666


Q ss_pred             CCcE-EEEEeCCc-cHHHHHHH--hcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCC
Q 009759          349 PEAR-IAFIGDGP-YREELEKM--FTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAG  424 (526)
Q Consensus       349 ~~~~-l~ivG~g~-~~~~l~~l--~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~g  424 (526)
                      .+.. .++++... ........  ....++.+.++.  +++.++|+.||++|.    .+.++++.|++++|+|+|.....
T Consensus       204 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~--~~~~~lm~~adl~It----~~G~~T~~Eal~~g~P~I~iP~~  277 (351)
T d1f0ka_         204 GDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVC----RSGALTVSEIAAAGLPALFVPFQ  277 (351)
T ss_dssp             GGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEE----CCCHHHHHHHHHHTCCEEECCCC
T ss_pred             cccceeeeeccccchhhhhhhhcccccccceeeeeh--hhHHHHHHhCchhhc----cccchHHHHHHHhCCceeeeecc
Confidence            5433 33333322 22222222  223478899998  689999999999993    34568999999999999987643


Q ss_pred             C---C----CceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 009759          425 G---I----PDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRETMGQAARQEMEKYDWRAATRTIR  488 (526)
Q Consensus       425 g---~----~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~~~~~a~~~~~~fs~~~~~~~~~  488 (526)
                      .   .    ++.+   ++.+.|+.++..  +.+.+.++|..+  +++.+.+|++++++......++.+++.++
T Consensus       278 ~~~~~Q~~NA~~l---~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~~~~~~~~~~~~~~~~~~a~~i~~~i~  345 (351)
T d1f0ka_         278 HKDRQQYWNALPL---EKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANEVS  345 (351)
T ss_dssp             CTTCHHHHHHHHH---HHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred             cCCchHHHHHHHH---HHCCCEEEechhhCCHHHHHHHHHhh--CHHHHHHHHHHHHccCCccHHHHHHHHHH
Confidence            2   1    2233   445677777532  578888888776  67778889888886654455666666664

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=99.35  E-value=5.6e-11  Score=115.20  Aligned_cols=323  Identities=16%  Similarity=0.126  Sum_probs=197.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCCCccccCceeccc---cccCCCccccc--cchhcc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGVPQEFYGAKLIGS---RSFPCPWYQKV--PLSLAL  192 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~  192 (526)
                      +||++++..-|      --..+..+.++|++. ++++.++.++.............++   ..+........  ...-..
T Consensus         3 kkI~~v~GtR~------e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~   76 (373)
T d1v4va_           3 KRVVLAFGTRP------EATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARI   76 (373)
T ss_dssp             EEEEEEECSHH------HHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHH
T ss_pred             CeEEEEEEhhH------HHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchhcCCCccccCCCCCCCCCHHHHHHHH
Confidence            47988875322      224577899999875 7899988876432111111111111   01111111111  111233


Q ss_pred             cHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeC
Q 009759          193 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  272 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  272 (526)
                      ...+.+++.+.+||+|++++.....+++..++...++|++. +|+-....  .....   -.-......+-+.+|..++.
T Consensus        77 ~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg--~~~~~---~~de~~R~~iskls~~hf~~  150 (373)
T d1v4va_          77 LPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSG--NLKEP---FPEEANRRLTDVLTDLDFAP  150 (373)
T ss_dssp             HHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCS--CTTSS---TTHHHHHHHHHHHCSEEEES
T ss_pred             HHHHhhhhhhcCcccccccccCccchhHHHHHHHhhhhhee-eccccccc--ccccC---cchhhhhhhhccccceeeec
Confidence            45677888999999999999888888888888999999874 33311110  00000   01123345566789999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeecCCCCCCCCCCcccHHHHHhhcCCCCCCcEEEEEecccccccHHHHHHHHHhC----
Q 009759          273 SVAIGKDLEAARVTAANKIRIWKKGVDSESFHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVEKSLDFLKRVMDRL----  348 (526)
Q Consensus       273 S~~~~~~l~~~~~~~~~ki~vi~ngid~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~Kg~~~li~a~~~l----  348 (526)
                      ++..++.+.+.+. +..++.++.+..-.. +.   ..............+.+.++..-+....++...+.+++..+    
T Consensus       151 t~~~~~~L~~~Ge-~~~~I~~vG~p~~D~-i~---~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~  225 (373)
T d1v4va_         151 TPLAKANLLKEGK-REEGILVTGQTGVDA-VL---LAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAF  225 (373)
T ss_dssp             SHHHHHHHHTTTC-CGGGEEECCCHHHHH-HH---HHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHC
T ss_pred             chhhhhhhhhhcc-cccceeecccchhhH-HH---hhhhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhhc
Confidence            9999999999875 667888877542111 00   00000000011233455566666665555555555544433    


Q ss_pred             CCcEEEEEeCCc--cHHHHHHHhc-CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEe-CCC
Q 009759          349 PEARIAFIGDGP--YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGV-RAG  424 (526)
Q Consensus       349 ~~~~l~ivG~g~--~~~~l~~l~~-~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~-~~g  424 (526)
                      .++.+++.....  ......+... ..++.++..+++.++..+++.|++++--|     |..+.||.++|+|+|.- +.|
T Consensus       226 ~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS-----ssgi~Ea~~lg~P~Inir~~~  300 (373)
T d1v4va_         226 PHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-----GGLQEEGAALGVPVVVLRNVT  300 (373)
T ss_dssp             TTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----HHHHHHHHHTTCCEEECSSSC
T ss_pred             ccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhceeEeccc-----chhhhcchhhcCcEEEeCCCc
Confidence            566776654322  2222223333 33799999999999999999999999443     67888999999999988 556


Q ss_pred             CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHHH
Q 009759          425 GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETMG  468 (526)
Q Consensus       425 g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~~  468 (526)
                      .-++.+   +.+.+ .++ ..|.+++.+++..++.++..+.++.
T Consensus       301 eRqeg~---~~g~n-vlv-~~d~~~I~~~i~~~l~~~~~~~~~~  339 (373)
T d1v4va_         301 ERPEGL---KAGIL-KLA-GTDPEGVYRVVKGLLENPEELSRMR  339 (373)
T ss_dssp             SCHHHH---HHTSE-EEC-CSCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             cCHHHH---hcCee-EEc-CCCHHHHHHHHHHHHcCHHHHhhcc
Confidence            666666   55544 333 3489999999999999988766553

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.30  E-value=4.2e-12  Score=124.89  Aligned_cols=130  Identities=11%  Similarity=0.040  Sum_probs=86.2

Q ss_pred             CCcEEEEEeccccc---ccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEec
Q 009759          322 DKPLIVHVGRLGVE---KSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMP  398 (526)
Q Consensus       322 ~~~~i~~vG~l~~~---Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~p  398 (526)
                      .+.+++..|.....   .-...+++++...+...++..|....  ...  ....||.+.+++|.   ..++..+|++|  
T Consensus       237 ~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~v~~~~~~p~---~~ll~~~~~~I--  307 (401)
T d1rrva_         237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTEL--VLP--DDRDDCFAIDEVNF---QALFRRVAAVI--  307 (401)
T ss_dssp             SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTC--CCS--CCCTTEEEESSCCH---HHHGGGSSEEE--
T ss_pred             CCeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEEecccccc--ccc--cCCCCEEEEeccCc---HHHhhhccEEE--
Confidence            34555666665433   23445566677776555555543221  000  01237999999964   45678899999  


Q ss_pred             CCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHHHHH
Q 009759          399 SESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQELRET  466 (526)
Q Consensus       399 s~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~~~~  466 (526)
                        ..|..+++.||+++|+|+|+....+    ..+.+   ++.+.|..++..  ++++|+++|.+++ +++.+++
T Consensus       308 --~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v---~~~G~g~~l~~~~~~~~~L~~ai~~vl-~~~~r~~  375 (401)
T d1rrva_         308 --HHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRV---AALGIGVAHDGPTPTFESLSAALTTVL-APETRAR  375 (401)
T ss_dssp             --ECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHH---HHHTSEEECSSSCCCHHHHHHHHHHHT-SHHHHHH
T ss_pred             --ecCCchHHHHHHHhCCCEEEecccccHHHHHHHH---HHCCCEEEcCcCCCCHHHHHHHHHHHh-CHHHHHH
Confidence              4667789999999999999987765    23344   445678877664  5899999999999 4554433

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.30  E-value=1.3e-10  Score=112.74  Aligned_cols=324  Identities=15%  Similarity=0.114  Sum_probs=187.8

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCCCc--c-ccCceeccccccCCCcccc-c-cchh
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGVPQ--E-FYGAKLIGSRSFPCPWYQK-V-PLSL  190 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~-~-~~~~  190 (526)
                      ++|||++|+..-|      --..+..++++|.+. +.++.++.++.....  . ..+..+.....+....... . ...-
T Consensus         1 ~k~Ki~~v~GtR~------e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~   74 (377)
T d1o6ca_           1 KKLKVMTVFGTRP------EAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITS   74 (377)
T ss_dssp             CCEEEEEEECSHH------HHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHHH
T ss_pred             CCceEEEEEEchH------hHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhcCCCCceeeecCCCCCCHHHHHH
Confidence            5799999975422      224467899999886 678888887643110  0 0111110000011111000 0 1112


Q ss_pred             cccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccc-cchHHHHHHHHhhcCcEE
Q 009759          191 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWL-VKPMWLVIKFLHRAADLT  269 (526)
Q Consensus       191 ~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ad~i  269 (526)
                      .....+.+.+.+.+||+|++++.....+++..++...++|++. +|+-...+      .+. ...-......+-+.+|..
T Consensus        75 ~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~H-iegG~~s~------~~~~~~~de~~R~~iskls~~h  147 (377)
T d1o6ca_          75 NALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGH-VEAGLRTG------NKYSPFPEELNRQMTGAIADLH  147 (377)
T ss_dssp             HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCS------CTTTTTTHHHHHHHHHHHCSEE
T ss_pred             HHHHhhhhhhhhcccceeEeeecccccchhhhhhhhccceEEE-Eecccccc------cccccCchhhhccccccceeEE
Confidence            2345667888899999999999888888888899999999863 44422111      010 011123344566889999


Q ss_pred             EeCChhHHHHHHHhcccCCCcEEEeecCC-CCCC-CCCCcccHHHHHhhcCCCCCCcEEEEEeccccc-----ccHHHHH
Q 009759          270 LVPSVAIGKDLEAARVTAANKIRIWKKGV-DSES-FHPRFRSSEMRWRLSNGEPDKPLIVHVGRLGVE-----KSLDFLK  342 (526)
Q Consensus       270 i~~S~~~~~~l~~~~~~~~~ki~vi~ngi-d~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~vG~l~~~-----Kg~~~li  342 (526)
                      ++.++..++.+.+.+. ..+++.++.+.. |.-. ........   ........+..+++..-+....     ..+..++
T Consensus       148 f~~t~~~~~~L~~~G~-~~~~I~~vG~~~~D~i~~~~~~~~~~---~~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~  223 (377)
T d1o6ca_         148 FAPTGQAKDNLLKENK-KADSIFVTGNTAIDALNTTVRDGYSH---PVLDQVGEDKMILLTAHRRENLGEPMENMFKAIR  223 (377)
T ss_dssp             EESSHHHHHHHHHTTC-CGGGEEECCCHHHHHHHHHCCSSCCC---STTTTTTTSEEEEECC----------HHHHHHHH
T ss_pred             eecchhhhhhhhhhcc-ccceEeeccchhHHHHHHHHHHHHhh---hhhhhccCCceEEEEeccccccccchHHHHHHHH
Confidence            9999999999999875 567888888753 2100 00000000   0000112334444444443221     1234455


Q ss_pred             HHHHhCCCcEEEEEeCCc--cHHHHHH-HhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEE
Q 009759          343 RVMDRLPEARIAFIGDGP--YREELEK-MFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV  419 (526)
Q Consensus       343 ~a~~~l~~~~l~ivG~g~--~~~~l~~-l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI  419 (526)
                      .++....++.+++.....  ....+.+ +....|+.+...+++.++..+++.|+++|-=|     |..+.||-.+|+|+|
T Consensus       224 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnS-----ss~i~Ea~~lg~P~I  298 (377)
T d1o6ca_         224 RIVGEFEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDS-----GGVQEEAPSLGKPVL  298 (377)
T ss_dssp             HHHHHCTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC-------CHHHHGGGGTCCEE
T ss_pred             hhcccccccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhheeeccc-----chhHHhhhhhhceEE
Confidence            666666666666544322  1222222 22234799999999999999999999999333     456889999999999


Q ss_pred             EeCC-CCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHHH
Q 009759          420 GVRA-GGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRETM  467 (526)
Q Consensus       420 ~~~~-gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~~  467 (526)
                      .-.. +.-++.+   +.|.+ .+++. |.+++.+++..++.++..++.+
T Consensus       299 nir~~tERqe~~---~~g~n-ilv~~-~~~~I~~~i~~~l~~~~~~~~~  342 (377)
T d1o6ca_         299 VLRDTTERPEGV---EAGTL-KLAGT-DEENIYQLAKQLLTDPDEYKKM  342 (377)
T ss_dssp             EECSCCC---CT---TTTSS-EEECS-CHHHHHHHHHHHHHCHHHHHHH
T ss_pred             EeCCCCcCcchh---hcCee-EECCC-CHHHHHHHHHHHHhChHHHhhh
Confidence            7744 3445555   44543 44544 8999999999999998776654

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.28  E-value=9.5e-11  Score=114.49  Aligned_cols=109  Identities=16%  Similarity=0.089  Sum_probs=72.9

Q ss_pred             HHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCc
Q 009759          338 LDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIP  417 (526)
Q Consensus       338 ~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~P  417 (526)
                      ...+++++...+ .++++.+.+....   ......||.+.||++.   ..++..+|++|..    |..+++.|||++|+|
T Consensus       240 ~~~~~~~l~~~~-~~~~~~~~~~~~~---~~~~~~~v~i~~~~p~---~~ll~~a~~~v~h----gG~~t~~Eal~~G~P  308 (391)
T d1pn3a_         240 AKMAIKAVRASG-RRIVLSRGWADLV---LPDDGADCFVVGEVNL---QELFGRVAAAIHH----DSAGTTLLAMRAGIP  308 (391)
T ss_dssp             HHHHHHHHHHTT-CCEEEECTTTTCC---CSSCCTTCCEESSCCH---HHHHTTSSCEEEE----SCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHhcC-CEEEEeccccccc---cccCCCCEEEecccCH---HHHHhhccEEEec----CchHHHHHHHHhCCc
Confidence            344556666664 4444444321110   0111237999999964   4568899999955    346799999999999


Q ss_pred             EEEeCCCCC--------CceecccCCCceeEeeCCC--CHHHHHHHHHHhhhC
Q 009759          418 VVGVRAGGI--------PDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYN  460 (526)
Q Consensus       418 vI~~~~gg~--------~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d  460 (526)
                      +|+....+-        .+.+   ++.+.|+.++..  ++++++++|.+++++
T Consensus       309 ~v~~P~~~d~~~eQ~~nA~~l---~~~G~g~~l~~~~~~~~~l~~~i~~~l~~  358 (391)
T d1pn3a_         309 QIVVRRVVDNVVEQAYHADRV---AELGVGVAVDGPVPTIDSLSAALDTALAP  358 (391)
T ss_dssp             EEEECSSCCBTTBCCHHHHHH---HHHTSEEEECCSSCCHHHHHHHHHHHTST
T ss_pred             EEEeccccCCcchHHHHHHHH---HHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence            999876542        2344   445678777654  489999999999964

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.22  E-value=3.9e-10  Score=110.21  Aligned_cols=124  Identities=12%  Similarity=0.074  Sum_probs=83.8

Q ss_pred             CcEEEEEecc-cccccHHHHHHHHHhCCCcEEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCC
Q 009759          323 KPLIVHVGRL-GVEKSLDFLKRVMDRLPEARIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSES  401 (526)
Q Consensus       323 ~~~i~~vG~l-~~~Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~  401 (526)
                      ..+++..|.. ...+..+.++++++..+...+++.|.....  ..  ....|+++.+++++   ..+|..+|++|    .
T Consensus       239 ~~i~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~--~~--~~~~nv~~~~~~p~---~~~l~~~~~~V----~  307 (401)
T d1iira_         239 PPVYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADLV--LP--DDGADCFAIGEVNH---QVLFGRVAAVI----H  307 (401)
T ss_dssp             CCEEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTCC--CS--SCGGGEEECSSCCH---HHHGGGSSEEE----E
T ss_pred             CeEEEccCccccchHHHHHHHHHHHHcCCeEEEeccCCccc--cc--cCCCCEEEEeccCH---HHHHhhcCEEE----e
Confidence            3444555544 345567888889888864444444432210  00  01227999999964   45688999999    5


Q ss_pred             CCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCCC--CHHHHHHHHHHhhhC
Q 009759          402 ETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYN  460 (526)
Q Consensus       402 e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d  460 (526)
                      .|..+++.||+++|+|+|+....+    ..+.+   ++.+.|..++..  ++++++++|.+++++
T Consensus       308 hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l---~~~G~g~~l~~~~~~~~~l~~ai~~~l~~  369 (401)
T d1iira_         308 HGGAGTTHVAARAGAPQILLPQMADQPYYAGRV---AELGVGVAHDGPIPTFDSLSAALATALTP  369 (401)
T ss_dssp             CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH---HHHTSEEECSSSSCCHHHHHHHHHHHTSH
T ss_pred             cCCchHHHHHHHhCCCEEEccccccHHHHHHHH---HHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence            677899999999999999986654    23344   445568777654  699999999999953

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=3e-09  Score=102.65  Aligned_cols=325  Identities=15%  Similarity=0.118  Sum_probs=189.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHC-CCeEEEEEeCCCCCccccCceeccc---cccCCCccccc--cchhcc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREM-GDEVMVVTTHEGVPQEFYGAKLIGS---RSFPCPWYQKV--PLSLAL  192 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~-G~~V~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~  192 (526)
                      |||++|+..-|      --..+..++++|.+. +.++.++.++...............   ..+........  ...-..
T Consensus         1 MKi~~v~GtR~------e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (376)
T d1f6da_           1 MKVLTVFGTRP------EAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRI   74 (376)
T ss_dssp             CEEEEEECSHH------HHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHHH
T ss_pred             CeEEEEEEhhH------hHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCCCcccccCCCCCCHHHHHHHH
Confidence            89999975422      224567899999886 6899999876432110000011111   01111111110  111223


Q ss_pred             cHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecCCcccccccccccccchHHHHHHHHhhcCcEEEeC
Q 009759          193 SPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVP  272 (526)
Q Consensus       193 ~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~  272 (526)
                      ...+.+.+.+.+||+|++++.....+++..++...++|++. +|+-....  ......   .-.......-+.+|..++.
T Consensus        75 i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~H-iegG~~s~--~~~~~~---pde~~R~~iskls~~hf~~  148 (376)
T d1f6da_          75 LEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGH-VEAGLRTG--DLYSPW---PEEANRTLTGHLAMYHFSP  148 (376)
T ss_dssp             HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEE-ESCCCCCS--CTTSST---THHHHHHHHHHTCSEEEES
T ss_pred             HHhhHHHHHhccCcceeeeccccchhhHHHHHHhhCceEEE-Eecccccc--cccccC---chhhhhhhhccceeEEEec
Confidence            44667788889999999999888888888889999999873 44422110  000000   1123345566889999999


Q ss_pred             ChhHHHHHHHhcccCCCcEEEeecCC-CC------CCCCCCcccHHHHHhhcCCC-CCCcEEEEEecc-cccccHHHHHH
Q 009759          273 SVAIGKDLEAARVTAANKIRIWKKGV-DS------ESFHPRFRSSEMRWRLSNGE-PDKPLIVHVGRL-GVEKSLDFLKR  343 (526)
Q Consensus       273 S~~~~~~l~~~~~~~~~ki~vi~ngi-d~------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~vG~l-~~~Kg~~~li~  343 (526)
                      ++..++.+.+.+. ..+++.++.+.. |.      .................... .+..+++..=+. ...+.++.+..
T Consensus       149 ~~~~~~~L~~~G~-~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~  227 (376)
T d1f6da_         149 TETSRQNLLRENV-ADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICH  227 (376)
T ss_dssp             SHHHHHHHHHTTC-CGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHH
T ss_pred             cHHHHhHHHhcCC-CccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchhhhhhHHHHHH
Confidence            9999999999886 568888887643 21      00000000011111111112 233334433333 23344555555


Q ss_pred             HHHhC----CCcEEEEEeCCc--cHHHHHHHhc-CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCC
Q 009759          344 VMDRL----PEARIAFIGDGP--YREELEKMFT-GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGI  416 (526)
Q Consensus       344 a~~~l----~~~~l~ivG~g~--~~~~l~~l~~-~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~  416 (526)
                      ++..+    .++.+++.....  ......+... ..++.+...+++.++..+++.|++++--|     |..+.||-.+|+
T Consensus       228 ~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignS-----ssgi~Ea~~lg~  302 (376)
T d1f6da_         228 ALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGK  302 (376)
T ss_dssp             HHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS-----SGGGGTGGGGTC
T ss_pred             HHhhhhhhcceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHHhhceEEEecC-----cchHhhHHHhCC
Confidence            55443    455555544321  2223333333 34899999999999999999999999443     567889999999


Q ss_pred             cEEEeCCC-CCCceecccCCCceeEeeCCCCHHHHHHHHHHhhhCHHHHHH
Q 009759          417 PVVGVRAG-GIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLYNQELRET  466 (526)
Q Consensus       417 PvI~~~~g-g~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~d~~~~~~  466 (526)
                      |+|.-..+ .-++.+   +.+ +..++. .|.+++.+++.+++.++...+.
T Consensus       303 P~Inir~~ter~~~~---~~g-~~i~v~-~~~~~I~~ai~~~l~~~~~~~~  348 (376)
T d1f6da_         303 PVLVMRDTTERPEAV---TAG-TVRLVG-TDKQRIVEEVTRLLKDENEYQA  348 (376)
T ss_dssp             CEEECSSCCSCHHHH---HHT-SEEECC-SSHHHHHHHHHHHHHCHHHHHH
T ss_pred             CEEEcCCCccCccce---ecC-eeEECC-CCHHHHHHHHHHHHhChHhhhh
Confidence            99965332 233444   223 334444 4899999999999988765443

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=98.80  E-value=2.8e-07  Score=91.13  Aligned_cols=133  Identities=13%  Similarity=0.108  Sum_probs=83.9

Q ss_pred             CCcEEEEEeccccc--ccHHHHHHHHHhCCCcEEEEEeCCccHHHH----HHHhcCCCeEEecccChhhHHHHHHcCcEE
Q 009759          322 DKPLIVHVGRLGVE--KSLDFLKRVMDRLPEARIAFIGDGPYREEL----EKMFTGMPAVFTGMLLGEELSQAYASGDVF  395 (526)
Q Consensus       322 ~~~~i~~vG~l~~~--Kg~~~li~a~~~l~~~~l~ivG~g~~~~~l----~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~  395 (526)
                      ...+.+..|.....  .-+..++++++.+ +.++++...+.....+    ... ...|+.+..++++.++.. ...++++
T Consensus       265 ~~~v~~s~gs~~~~~~~~~~~~~~~~~~~-~~~vl~~~~~~~~~~l~~~~~~~-~~~nv~~~~~~pq~~lL~-hp~~~~f  341 (450)
T d2c1xa1         265 TSVVYISFGTVTTPPPAEVVALSEALEAS-RVPFIWSLRDKARVHLPEGFLEK-TRGYGMVVPWAPQAEVLA-HEAVGAF  341 (450)
T ss_dssp             TCEEEEECCSSCCCCHHHHHHHHHHHHHH-TCCEEEECCGGGGGGSCTTHHHH-HTTTEEEESCCCHHHHHT-STTEEEE
T ss_pred             cceeeecccccccCCHHHHHHHHHHHHhc-CCeEEEEECCCccccCChhhhhh-ccccccccccCChHhhhc-cCceeEE
Confidence            33445555655332  2356677777776 4455554432221111    111 133899999997654321 2677888


Q ss_pred             EecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC----ceecccCCCceeEeeCCC--CHHHHHHHHHHhhhCHHH
Q 009759          396 VMPSESETLGLVVLEAMSSGIPVVGVRAGGIP----DIIPEDQDGKIGYLFNPG--DLDDCLSKLEPLLYNQEL  463 (526)
Q Consensus       396 v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~----e~v~~~~~~~~g~~~~~~--d~~~la~ai~~ll~d~~~  463 (526)
                      |    ..|..+++.||+.+|+|+|+....+=+    ..+.  +..+.|..++.+  +.+++.++|.++++|+..
T Consensus       342 I----tHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~--~~~G~G~~l~~~~~t~~~l~~ai~~vL~d~~y  409 (450)
T d2c1xa1         342 V----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVE--DVLEIGVRIEGGVFTKSGLMSCFDQILSQEKG  409 (450)
T ss_dssp             E----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTSCCEEECGGGSCCHHHHHHHHHHHHHSHHH
T ss_pred             E----ccCCccHHHHHHHcCCCEEecccccchHHHHHHHH--HHcCcEEEecCCCcCHHHHHHHHHHHhcCcHH
Confidence            8    556678999999999999998765422    1220  234678777643  789999999999999754

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=98.72  E-value=1.1e-06  Score=86.96  Aligned_cols=140  Identities=12%  Similarity=0.095  Sum_probs=88.5

Q ss_pred             EEEEEecccc--cccHHHHHHHHHhCCCcEEEEEeCCc-------cHHHHHHHhcCCCeEEecccChhhHHHHH--HcCc
Q 009759          325 LIVHVGRLGV--EKSLDFLKRVMDRLPEARIAFIGDGP-------YREELEKMFTGMPAVFTGMLLGEELSQAY--ASGD  393 (526)
Q Consensus       325 ~i~~vG~l~~--~Kg~~~li~a~~~l~~~~l~ivG~g~-------~~~~l~~l~~~~~V~~~g~v~~~~l~~~~--~~aD  393 (526)
                      +++..|....  ......++++++.++.-.+..++...       ..+..... ...||.+..++|+.++   +  .+++
T Consensus       291 v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~Nv~~~~~~Pq~~l---L~hp~~~  366 (473)
T d2pq6a1         291 VYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNE-IADRGLIASWCPQDKV---LNHPSIG  366 (473)
T ss_dssp             EEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHH-HTTTEEEESCCCHHHH---HTSTTEE
T ss_pred             eeeccCccccccHHHHHHHHHHHHhcCCeEEEEEccCCcccccccCcccchhh-ccCceEEeeeCCHHHH---hcCCcCc
Confidence            3444454432  23467778888888654444454221       11222211 2348999999986654   5  5788


Q ss_pred             EEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCCC-CHHHHHHHHHHhhhCHHHHHHHH
Q 009759          394 VFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNPG-DLDDCLSKLEPLLYNQELRETMG  468 (526)
Q Consensus       394 v~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~~-d~~~la~ai~~ll~d~~~~~~~~  468 (526)
                      ++|    .-|..+++.||+.+|+|.|+....+    ....+.  +..+.|..++.. +.++++++|.++++|+.. ++++
T Consensus       367 ~fI----tHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~--~~~G~G~~l~~~~t~~~l~~ai~~vl~d~~~-~~~r  439 (473)
T d2pq6a1         367 GFL----THCGWNSTTESICAGVPMLCWPFFADQPTDCRFIC--NEWEIGMEIDTNVKREELAKLINEVIAGDKG-KKMK  439 (473)
T ss_dssp             EEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTSCCEEECCSSCCHHHHHHHHHHHHTSHHH-HHHH
T ss_pred             EEE----ecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHH--HHcCeEEeeCCCcCHHHHHHHHHHHHcCChH-HHHH
Confidence            888    5566789999999999999987643    112220  233667776643 799999999999999763 3444


Q ss_pred             HHHHHHH
Q 009759          469 QAARQEM  475 (526)
Q Consensus       469 ~~a~~~~  475 (526)
                      +++++..
T Consensus       440 ~~a~~l~  446 (473)
T d2pq6a1         440 QKAMELK  446 (473)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5554443

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=98.60  E-value=1.8e-05  Score=77.67  Aligned_cols=130  Identities=15%  Similarity=0.083  Sum_probs=79.0

Q ss_pred             cHHHHHHHHHhCCCcEEEEE-eCCc---cHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHH
Q 009759          337 SLDFLKRVMDRLPEARIAFI-GDGP---YREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAM  412 (526)
Q Consensus       337 g~~~li~a~~~l~~~~l~iv-G~g~---~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAm  412 (526)
                      -++.++.+++.. +.++++. +...   ..+..+......|+.+..+.+..++. .+..+|++|    ..|.-+++.||+
T Consensus       292 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~v~~~~pq~~~l-~~p~~~~fI----tHGG~gs~~eAl  365 (461)
T d2acva1         292 QIREIALGLKHS-GVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVL-AHKAIGGFV----SHCGWNSILESM  365 (461)
T ss_dssp             HHHHHHHHHHHH-TCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHH-HSTTEEEEE----ECCCHHHHHHHH
T ss_pred             HHHHHHHHHHhc-CccEEEEeecccccCCccchhhhccCCCeEEEecCCHHHHH-hcccCCEEE----ecCCccHHHHHH
Confidence            355556666665 3444443 3211   11111222223378888888755443 568899999    556678999999


Q ss_pred             HcCCcEEEeCCCCC----Cce-ecccCCCceeEeeCC--------CCHHHHHHHHHHhhhC-HHHHHH---HHHHHHHHH
Q 009759          413 SSGIPVVGVRAGGI----PDI-IPEDQDGKIGYLFNP--------GDLDDCLSKLEPLLYN-QELRET---MGQAARQEM  475 (526)
Q Consensus       413 a~G~PvI~~~~gg~----~e~-v~~~~~~~~g~~~~~--------~d~~~la~ai~~ll~d-~~~~~~---~~~~a~~~~  475 (526)
                      ++|+|+|+....+=    ... +   +..+.|+.++.        -++++++++|.+++++ +..+++   +++.+++.+
T Consensus       366 ~~GVP~l~~P~~~DQ~~nA~rlv---e~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~  442 (461)
T d2acva1         366 WFGVPILTWPIYAEQQLNAFRLV---KEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAV  442 (461)
T ss_dssp             HTTCCEEECCCSTTHHHHHHHHH---HTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHT
T ss_pred             HcCCCEEeCCcccchHHHHHHHH---HHhCceEEeeccccccCCccCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence            99999999876432    122 3   34456776643        2689999999999964 434433   344444444

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.48  E-value=0.00012  Score=71.80  Aligned_cols=85  Identities=14%  Similarity=0.066  Sum_probs=59.9

Q ss_pred             CCCeEEecccChhhHHHHHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCC----CCceecccCCCceeEeeCC--
Q 009759          371 GMPAVFTGMLLGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGG----IPDIIPEDQDGKIGYLFNP--  444 (526)
Q Consensus       371 ~~~V~~~g~v~~~~l~~~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg----~~e~v~~~~~~~~g~~~~~--  444 (526)
                      ..||.+.+|+|+.++.. ..+++++|    .-|..+++.||+.+|+|+|+....+    ....+.  +..+.|+....  
T Consensus       333 ~~nv~~~~w~Pq~~lL~-hp~~~~fV----tHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~--e~lG~Gv~l~~~~  405 (471)
T d2vcha1         333 KRGFVIPFWAPQAQVLA-HPSTGGFL----THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLS--EDIRAALRPRAGD  405 (471)
T ss_dssp             TTEEEEESCCCHHHHHH-STTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH--HTTCCEECCCCCT
T ss_pred             CCCeeecccCCHHHHhc-CccCCEEE----ecCCccHHHHHHHcCCCEEEcccccccHHHHHHHH--HHheeEEEEecCC
Confidence            34799999998765422 15678888    5566789999999999999987643    111120  22345665533  


Q ss_pred             ---CCHHHHHHHHHHhhhCHH
Q 009759          445 ---GDLDDCLSKLEPLLYNQE  462 (526)
Q Consensus       445 ---~d~~~la~ai~~ll~d~~  462 (526)
                         -+.++++++|.++++|++
T Consensus       406 ~~~~t~~~l~~ai~~vl~~~~  426 (471)
T d2vcha1         406 DGLVRREEVARVVKGLMEGEE  426 (471)
T ss_dssp             TSCCCHHHHHHHHHHHHTSTH
T ss_pred             CCcCCHHHHHHHHHHHhCCcH
Confidence               278999999999999864

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=98.27  E-value=2.8e-05  Score=73.48  Aligned_cols=97  Identities=14%  Similarity=0.203  Sum_probs=64.0

Q ss_pred             CCCcEE-EEEe-ccccccc--HHHHHHHHHhC--CCcEEEEEeCCccHHHHHHHhcCC------C-eEEecccChhhHHH
Q 009759          321 PDKPLI-VHVG-RLGVEKS--LDFLKRVMDRL--PEARIAFIGDGPYREELEKMFTGM------P-AVFTGMLLGEELSQ  387 (526)
Q Consensus       321 ~~~~~i-~~vG-~l~~~Kg--~~~li~a~~~l--~~~~l~ivG~g~~~~~l~~l~~~~------~-V~~~g~v~~~~l~~  387 (526)
                      .+++.| +..| +....|.  .+.+.++++.+  .+.+++++|...+.+..+.+....      + +.+.|..+-.|+..
T Consensus       178 ~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~  257 (348)
T d1pswa_         178 SERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVI  257 (348)
T ss_dssp             SSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHH
T ss_pred             cCCCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccchHHHHHHHHHhhhcccccccccccCCccHHHHHH
Confidence            344444 4444 2233343  34445555444  468899999766666655554432      2 44567777789999


Q ss_pred             HHHcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeC
Q 009759          388 AYASGDVFVMPSESETLGLVVLEAMSSGIPVVGVR  422 (526)
Q Consensus       388 ~~~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~  422 (526)
                      +++.||++|.+.     ++.+--|.++|+|+|+--
T Consensus       258 li~~a~l~I~~D-----tg~~HlAaa~g~p~i~lf  287 (348)
T d1pswa_         258 LIAACKAIVTND-----SGLMHVAAALNRPLVALY  287 (348)
T ss_dssp             HHHTSSEEEEES-----SHHHHHHHHTTCCEEEEE
T ss_pred             HHhcceeEeecC-----ccHHHHHHHcCCCEEEEE
Confidence            999999999765     356677999999999863

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.27  E-value=2.7e-05  Score=79.96  Aligned_cols=186  Identities=12%  Similarity=0.102  Sum_probs=123.8

Q ss_pred             HHHHHhhcCcEEEeCChhHHHHHHHhc-----ccCCCcEEEeecCCCCCCCCCCcc------------------------
Q 009759          258 VIKFLHRAADLTLVPSVAIGKDLEAAR-----VTAANKIRIWKKGVDSESFHPRFR------------------------  308 (526)
Q Consensus       258 ~~~~~~~~ad~ii~~S~~~~~~l~~~~-----~~~~~ki~vi~ngid~~~~~~~~~------------------------  308 (526)
                      +...++..+..+-.+|.--.+.+++..     .....++.-+.|||....|-....                        
T Consensus       430 Ma~Lal~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~  509 (824)
T d2gj4a1         430 MAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRK  509 (824)
T ss_dssp             HHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGG
T ss_pred             HHHHHHHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHH
Confidence            334456667777778887777666542     123368999999999988843210                        


Q ss_pred             ------cHH-------------------HHHhhcC-CCCCCcEEEEEecccccccHHHHH-------HHHHhCC-----C
Q 009759          309 ------SSE-------------------MRWRLSN-GEPDKPLIVHVGRLGVEKSLDFLK-------RVMDRLP-----E  350 (526)
Q Consensus       309 ------~~~-------------------~~~~~~~-~~~~~~~i~~vG~l~~~Kg~~~li-------~a~~~l~-----~  350 (526)
                            ...                   ...+.+. ..++...++++-|+...|...+.+       +-+++.+     .
T Consensus       510 l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P  589 (824)
T d2gj4a1         510 LLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVP  589 (824)
T ss_dssp             GGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCC
T ss_pred             HHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCC
Confidence                  000                   0001111 356788899999999999977732       2233332     4


Q ss_pred             cEEEEEeCC-c---cHHH-HH------HHhcCC-------CeEEecccChhhHHHHHHcCcEEEecCC--CCCCcHHHHH
Q 009759          351 ARIAFIGDG-P---YREE-LE------KMFTGM-------PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLE  410 (526)
Q Consensus       351 ~~l~ivG~g-~---~~~~-l~------~l~~~~-------~V~~~g~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~ilE  410 (526)
                      ++|++.|.. |   .-+. ++      +.++..       +|.|+....-.-...++.+|||-+..++  .|..|..=+-
T Consensus       590 ~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK  669 (824)
T d2gj4a1         590 RTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMK  669 (824)
T ss_dssp             EEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHH
T ss_pred             eEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhH
Confidence            788998842 1   1111 11      222211       4888888776777789999999998776  6999999999


Q ss_pred             HHHcCCcEEEeCCCCCCceecccCCCceeEeeCC
Q 009759          411 AMSSGIPVVGVRAGGIPDIIPEDQDGKIGYLFNP  444 (526)
Q Consensus       411 Ama~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~  444 (526)
                      +|..|.+.+++-.|...|+..+ ..+++||++..
T Consensus       670 ~alNGal~lstlDGwnvEi~~~-vg~~N~~~fG~  702 (824)
T d2gj4a1         670 FMLNGALTIGTMDGANVEMAEE-AGEENFFIFGM  702 (824)
T ss_dssp             HHHTTCEEEECSCTTHHHHHHH-HCGGGSEECSC
T ss_pred             HHHcCCeeeccccchHHHHHHh-cCcccEEEeCC
Confidence            9999999999999988887611 12678888753

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=1.9e-05  Score=81.07  Aligned_cols=183  Identities=13%  Similarity=0.078  Sum_probs=121.8

Q ss_pred             HHHhhcCcEEEeCChhHHHHHHHhcc-----cCCCcEEEeecCCCCCCCCCCcc--------------------------
Q 009759          260 KFLHRAADLTLVPSVAIGKDLEAARV-----TAANKIRIWKKGVDSESFHPRFR--------------------------  308 (526)
Q Consensus       260 ~~~~~~ad~ii~~S~~~~~~l~~~~~-----~~~~ki~vi~ngid~~~~~~~~~--------------------------  308 (526)
                      ..++..+..+-.+|.--.+.+++...     ....++.-|.|||....|.....                          
T Consensus       408 ~LAl~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~  487 (796)
T d1l5wa_         408 NLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLE  487 (796)
T ss_dssp             HHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGG
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHHHH
Confidence            44566778888999887776655321     22358999999998766532100                          


Q ss_pred             ----cH----HH---------------HHhhcC-CCCCCcEEEEEecccccccHHHHHHH-------HHhCC-----CcE
Q 009759          309 ----SS----EM---------------RWRLSN-GEPDKPLIVHVGRLGVEKSLDFLKRV-------MDRLP-----EAR  352 (526)
Q Consensus       309 ----~~----~~---------------~~~~~~-~~~~~~~i~~vG~l~~~Kg~~~li~a-------~~~l~-----~~~  352 (526)
                          ..    .+               +.+.+. ..++...++++-|+...|...+++.-       ++..+     .++
T Consensus       488 ~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq  567 (796)
T d1l5wa_         488 KFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRV  567 (796)
T ss_dssp             GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEE
T ss_pred             hccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceE
Confidence                00    00               001111 25678889999999999998774422       22222     478


Q ss_pred             EEEEeCC-cc---HHHHH-------HHhcCC-------CeEEecccChhhHHHHHHcCcEEEecCC--CCCCcHHHHHHH
Q 009759          353 IAFIGDG-PY---REELE-------KMFTGM-------PAVFTGMLLGEELSQAYASGDVFVMPSE--SETLGLVVLEAM  412 (526)
Q Consensus       353 l~ivG~g-~~---~~~l~-------~l~~~~-------~V~~~g~v~~~~l~~~~~~aDv~v~ps~--~e~~~~~ilEAm  412 (526)
                      |++.|.. |.   -+++-       +.++..       +|.|+...+-+-...++.+|||-+..++  .|..|..-+-|+
T Consensus       568 ~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaa  647 (796)
T d1l5wa_         568 FLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLA  647 (796)
T ss_dssp             EEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHH
T ss_pred             EEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHH
Confidence            9999953 11   12221       112111       4788887766667788999999998776  699999999999


Q ss_pred             HcCCcEEEeCCCCCCceecccCCCceeEeeC
Q 009759          413 SSGIPVVGVRAGGIPDIIPEDQDGKIGYLFN  443 (526)
Q Consensus       413 a~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~  443 (526)
                      ..|.+.+++-.|...|+... ..+++||++.
T Consensus       648 lNG~lnlstlDGw~vE~~~~-vg~eN~f~fG  677 (796)
T d1l5wa_         648 LNGALTVGTLDGANVEIAEK-VGEENIFIFG  677 (796)
T ss_dssp             HTTCEEEECSCTTHHHHHHH-HCGGGSEECS
T ss_pred             HcCCeeeecccchHHHHHHh-cCccceEEec
Confidence            99999999999988887711 1277898885

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.55  E-value=0.079  Score=39.81  Aligned_cols=102  Identities=16%  Similarity=0.105  Sum_probs=62.5

Q ss_pred             CcEEEEEeccCCCCccCchH--HHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHH
Q 009759          118 PRRIALFVEPSPFSYVSGYK--NRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~--~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      +.||+++... |....-|.+  ....+.+++|++.|+++.++..++......+.            ...++.+.......
T Consensus         4 ~kkvlViGsG-p~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d------------~aD~lYfeplt~e~   70 (121)
T d1a9xa4           4 REKIMVLGGG-PNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD------------TSDRLYFEPVTLED   70 (121)
T ss_dssp             SCEEEEECCC-SCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT------------SSSEEECCCCSHHH
T ss_pred             CCEEEEECCC-cCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh------------hcCceEEccCCHHH
Confidence            4589888653 444444444  44689999999999999999887653221111            11122222234568


Q ss_pred             HHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEE
Q 009759          196 IISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV  232 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v  232 (526)
                      +.+++++++||-|+.....-..+....-....|++++
T Consensus        71 v~~Ii~~E~p~~ii~~~GGQtalnla~~L~~~gv~iL  107 (121)
T d1a9xa4          71 VLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVI  107 (121)
T ss_dssp             HHHHHHHHCCSEEECSSSTHHHHTTHHHHHHTTCCBC
T ss_pred             HHHHHHHhCCCEEEeehhhhhHHHHHHHHHHcCCcEE
Confidence            8899999999999987654443332222344565543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.75  E-value=0.38  Score=36.39  Aligned_cols=88  Identities=14%  Similarity=0.069  Sum_probs=56.7

Q ss_pred             CCCcEEEEEeccCCCCccCchH--HHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhccc
Q 009759          116 SRPRRIALFVEPSPFSYVSGYK--NRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALS  193 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~--~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (526)
                      ....||+++... |....-|.+  ....+.+++|++.|+++.++..++......+.            ...++.+.....
T Consensus         5 ~~~kkvlilGsG-p~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d------------~aD~lYfePlt~   71 (127)
T d1a9xa3           5 TDIKSILILGAG-PIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE------------MADATYIEPIHW   71 (127)
T ss_dssp             SSCCEEEEECCC-SCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG------------GSSEEECSCCCH
T ss_pred             CCCCEEEEECCC-cCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh------------hcceeeeecCCH
Confidence            345689888653 433333433  45789999999999999999887653221111            111222223345


Q ss_pred             HHHHHHHHhcCCCEEEECCCchH
Q 009759          194 PRIISEVARFKPDIIHASSPGIM  216 (526)
Q Consensus       194 ~~l~~~l~~~~pDiV~~~~~~~~  216 (526)
                      ..+.+++++++||.|+..-....
T Consensus        72 e~v~~Ii~~E~pd~il~~~GGQt   94 (127)
T d1a9xa3          72 EVVRKIIEKERPDAVLPTMGGQT   94 (127)
T ss_dssp             HHHHHHHHHHCCSEEECSSSHHH
T ss_pred             HHHHHHHHHhCcCCeEEEeeeeh
Confidence            68899999999999998765433

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.41  E-value=0.047  Score=39.71  Aligned_cols=92  Identities=14%  Similarity=0.119  Sum_probs=50.1

Q ss_pred             CCCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhccc
Q 009759          114 NNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALS  193 (526)
Q Consensus       114 ~~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (526)
                      .+.+.+||.|+.-       ||.+.  ..||+.|.++||+|+-.-......  .......++..+... ..         
T Consensus         4 ~~~~~~~ihfiGi-------gG~GM--s~LA~~L~~~G~~VsGSD~~~~~~--~~~L~~~Gi~v~~g~-~~---------   62 (96)
T d1p3da1           4 EMRRVQQIHFIGI-------GGAGM--SGIAEILLNEGYQISGSDIADGVV--TQRLAQAGAKIYIGH-AE---------   62 (96)
T ss_dssp             CCTTCCEEEEETT-------TSTTH--HHHHHHHHHHTCEEEEEESCCSHH--HHHHHHTTCEEEESC-CG---------
T ss_pred             cchhCCEEEEEEE-------CHHHH--HHHHHHHHhCCCEEEEEeCCCChh--hhHHHHCCCeEEECC-cc---------
Confidence            4566678977732       45444  568999999999999764332110  000011111111000 00         


Q ss_pred             HHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEE
Q 009759          194 PRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV  232 (526)
Q Consensus       194 ~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v  232 (526)
                          ..+  .++|+|+....-...-..+..++..|+|++
T Consensus        63 ----~~i--~~~d~vV~S~AI~~~npel~~A~~~gipii   95 (96)
T d1p3da1          63 ----EHI--EGASVVVVSSAIKDDNPELVTSKQKRIPVI   95 (96)
T ss_dssp             ----GGG--TTCSEEEECTTSCTTCHHHHHHHHTTCCEE
T ss_pred             ----ccC--CCCCEEEECCCcCCCCHHHHHHHHcCCCEE
Confidence                001  167998887643333345667888999986

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.38  E-value=0.12  Score=43.37  Aligned_cols=83  Identities=16%  Similarity=0.049  Sum_probs=47.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCc----eeccccccCCCccccccchhcccH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGA----KLIGSRSFPCPWYQKVPLSLALSP  194 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  194 (526)
                      |||+++..          .......++.|.+.||+|..+.+.+........+    ...+++.+..   ...........
T Consensus         1 MkI~~~G~----------~~~~~~~l~~L~~~~~~i~~V~t~p~~~~~~~~v~~~a~~~~ipv~~~---~~~~~~~~~~~   67 (203)
T d2bw0a2           1 MKIAVIGQ----------SLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKY---SRWRAKGQALP   67 (203)
T ss_dssp             CEEEEECC----------HHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEEC---SCCEETTEECH
T ss_pred             CEEEEEcC----------CHHHHHHHHHHHHCCCcEEEEEcCCCcCcCCChhhhhHHhcCCccccc---ccccccccccH
Confidence            89988843          3566788999999999999766543221111000    0011111111   11111122334


Q ss_pred             HHHHHHHhcCCCEEEECCCc
Q 009759          195 RIISEVARFKPDIIHASSPG  214 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~~~  214 (526)
                      .+.+.+++.+||++++..+.
T Consensus        68 ~~~~~l~~~~~Dliv~~~~~   87 (203)
T d2bw0a2          68 DVVAKYQALGAELNVLPFCS   87 (203)
T ss_dssp             HHHHHHHTTCCSEEEESSCS
T ss_pred             HHHHHHHHhCCCceEEeecc
Confidence            67788899999999998754

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.47  E-value=0.14  Score=36.43  Aligned_cols=88  Identities=15%  Similarity=0.118  Sum_probs=48.6

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHH
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (526)
                      .|||.|+.       .||.+.  ..||+.|.++|++|+---....  +.....+..++..+.- ....   .        
T Consensus         1 ~~~ihfiG-------IgG~GM--s~LA~~L~~~G~~VsGSD~~~~--~~t~~L~~~Gi~i~~g-h~~~---~--------   57 (89)
T d1j6ua1           1 HMKIHFVG-------IGGIGM--SAVALHEFSNGNDVYGSNIEET--ERTAYLRKLGIPIFVP-HSAD---N--------   57 (89)
T ss_dssp             CCEEEEET-------TTSHHH--HHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTCCEESS-CCTT---S--------
T ss_pred             CcEEEEEe-------ECHHHH--HHHHHHHHhCCCeEEEEeCCCC--hhHHHHHHCCCeEEee-eccc---c--------
Confidence            38987773       256554  4579999999999987743321  1111112222221110 0000   0        


Q ss_pred             HHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEE
Q 009759          198 SEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIV  232 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v  232 (526)
                        +  .++|+|+....-...-..+..++..++|+.
T Consensus        58 --i--~~~d~vV~SsAI~~~npel~~A~~~gIpv~   88 (89)
T d1j6ua1          58 --W--YDPDLVIKTPAVRDDNPEIVRARMERVPIE   88 (89)
T ss_dssp             --C--CCCSEEEECTTCCTTCHHHHHHHHTTCCEE
T ss_pred             --c--CCCCEEEEecCcCCCCHHHHHHHHcCCCcc
Confidence              0  278999887643333345667888999975

>d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: LmbE-like
superfamily: LmbE-like
family: LmbE-like
domain: Hypothetical protein TT1542
species: Thermus thermophilus [TaxId: 274]

Probab=91.01  E-value=0.35  Score=41.20  Aligned_cols=89  Identities=9%  Similarity=0.098  Sum_probs=47.4

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcccc-----------Cceeccccc---cCCCccc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFY-----------GAKLIGSRS---FPCPWYQ  184 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~-----------~~~~~~~~~---~~~~~~~  184 (526)
                      ||||+|+.+ |    +=....+-..+..+.+.|++|.+++...+......           ....+++..   +..+- .
T Consensus         2 ~~VLvi~aH-P----DDe~lg~GGtiak~~~~G~~V~vv~~T~G~~~~~~~~~~R~~E~~~a~~~lG~~~~~~l~~~d-~   75 (227)
T d1uana_           2 LDLLVVAPH-P----DDGELGCGGTLARAKAEGLSTGILDLTRGEMGSKGTPEEREKEVAEASRILGLDFRGNLGFPD-G   75 (227)
T ss_dssp             EEEEEEESS-T----THHHHHHHHHHHHHHHTTCCEEEEEEECCTTTCCSCHHHHHHHHHHHHHHHTCSEEEEEEECT-T
T ss_pred             ceEEEEEeC-C----ChHHHHHHHHHHHHHHcCCeEEEEEEeCCCCCCCCchhhhHHHHHhhhhhcccchheeeeecc-c
Confidence            799999764 3    22333344556667888999999886543211100           001111111   01110 1


Q ss_pred             cccchhcccHHHHHHHHhcCCCEEEECCC
Q 009759          185 KVPLSLALSPRIISEVARFKPDIIHASSP  213 (526)
Q Consensus       185 ~~~~~~~~~~~l~~~l~~~~pDiV~~~~~  213 (526)
                      .+.........+.+++++.+||+|+.+.+
T Consensus        76 ~l~~~~~~~~~l~~~i~~~~PdiV~t~~~  104 (227)
T d1uana_          76 GLADVPEQRLKLAQALRRLRPRVVFAPLE  104 (227)
T ss_dssp             CCCCCHHHHHHHHHHHHHHCEEEEEEECS
T ss_pred             ccccchhhhhhhhhheecccccEEEecCc
Confidence            11112234456778888899999998764

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.93  E-value=0.54  Score=35.99  Aligned_cols=33  Identities=18%  Similarity=0.261  Sum_probs=27.2

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHE  161 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~  161 (526)
                      |||+++          |.+..-..+++.|.+.|++|.++-.+.
T Consensus         1 M~IvI~----------G~G~~G~~la~~L~~~g~~v~vid~d~   33 (132)
T d1lssa_           1 MYIIIA----------GIGRVGYTLAKSLSEKGHDIVLIDIDK   33 (132)
T ss_dssp             CEEEEE----------CCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CEEEEE----------CCCHHHHHHHHHHHHCCCCcceecCCh
Confidence            888777          335778899999999999999996644

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=90.31  E-value=0.2  Score=45.64  Aligned_cols=31  Identities=16%  Similarity=0.174  Sum_probs=26.6

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEE
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVT  158 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~  158 (526)
                      ||||+.         ||.+..-..|++.|.++||+|.++.
T Consensus         1 MKiLIt---------G~tGfIG~~l~~~L~~~g~~V~~~d   31 (338)
T d1udca_           1 MRVLVT---------GGSGYIGSHTCVQLLQNGHDVIILD   31 (338)
T ss_dssp             CEEEEE---------TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEE---------CCCCHHHHHHHHHHHHCcCEEEEEE
Confidence            898666         6777888999999999999999885

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.24  E-value=0.83  Score=37.93  Aligned_cols=78  Identities=21%  Similarity=0.193  Sum_probs=44.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCcc--c-cCc----eeccccccCCCccccccchhc
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQE--F-YGA----KLIGSRSFPCPWYQKVPLSLA  191 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~--~-~~~----~~~~~~~~~~~~~~~~~~~~~  191 (526)
                      |||+++...          ......+++|.+.||+|..+.+.......  . ..+    ...++..+....        .
T Consensus         1 Mkiv~~~~~----------~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~--------~   62 (203)
T d2blna2           1 MKTVVFAYH----------DMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDN--------V   62 (203)
T ss_dssp             CEEEEEECH----------HHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSC--------C
T ss_pred             CeEEEEecC----------HHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceeccc--------c
Confidence            899888542          45577888999999999776653321110  0 000    001111111100        0


Q ss_pred             ccHHHHHHHHhcCCCEEEECCCc
Q 009759          192 LSPRIISEVARFKPDIIHASSPG  214 (526)
Q Consensus       192 ~~~~l~~~l~~~~pDiV~~~~~~  214 (526)
                      -...+.+.+++.+||++++.++.
T Consensus        63 ~~~~~~~~i~~~~~Dlii~~g~~   85 (203)
T d2blna2          63 NHPLWVERIAQLSPDVIFSFYYR   85 (203)
T ss_dssp             CSHHHHHHHHHTCCSEEEEESCC
T ss_pred             cchhhhhhhhhhcccceeeeecc
Confidence            12467788889999999887754

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=89.53  E-value=0.72  Score=38.45  Aligned_cols=86  Identities=16%  Similarity=0.055  Sum_probs=46.1

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccC-cee----ccccccCCCccccccchh
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYG-AKL----IGSRSFPCPWYQKVPLSL  190 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~  190 (526)
                      +.+|||+++..          ........+.|.+.|++|..+............ ...    ........+.   .....
T Consensus         1 ~~~mKI~f~G~----------~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~   67 (206)
T d1fmta2           1 SESLRIIFAGT----------PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPV---FQPVS   67 (206)
T ss_dssp             CCCCEEEEEEC----------SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCE---ECCSC
T ss_pred             CCCcEEEEECC----------CHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccc---ccccc
Confidence            35799988843          245667788899999998877654321110000 000    0000000110   01111


Q ss_pred             cccHHHHHHHHhcCCCEEEECCCc
Q 009759          191 ALSPRIISEVARFKPDIIHASSPG  214 (526)
Q Consensus       191 ~~~~~l~~~l~~~~pDiV~~~~~~  214 (526)
                      .....+.+.++..++|++++.++.
T Consensus        68 ~~~~~~~~~~~~~~~d~~v~~~~~   91 (206)
T d1fmta2          68 LRPQENQQLVAELQADVMVVVAYG   91 (206)
T ss_dssp             SCSHHHHHHHHHTTCSEEEEESCC
T ss_pred             ccchhhHHHHhhhcceEEEeeccc
Confidence            223567788889999998886653

>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoB receiver domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.39  E-value=1.6  Score=32.57  Aligned_cols=76  Identities=12%  Similarity=-0.003  Sum_probs=48.1

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHH
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (526)
                      .||||+|-+.         ......+.+.|.+.||+|..+...                                 ....
T Consensus         1 nirILiVdDd---------~~~~~~l~~~L~~~g~~v~~a~~~---------------------------------~~al   38 (122)
T d1kgsa2           1 NVRVLVVEDE---------RDLADLITEALKKEMFTVDVCYDG---------------------------------EEGM   38 (122)
T ss_dssp             CCEEEEECSS---------HHHHHHHHHHHHHTTCEEEEESSH---------------------------------HHHH
T ss_pred             CCEEEEEeCC---------HHHHHHHHHHHHHCCCEEEEEcch---------------------------------HHHH
Confidence            3899999663         255677888899999999876321                                 2445


Q ss_pred             HHHHhcCCCEEEECC--CchHHHHHHH--HHHhcCCCEEEEE
Q 009759          198 SEVARFKPDIIHASS--PGIMVFGALI--IAKLLCVPIVMSY  235 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~--~~~~~~~~~~--~~~~~~~p~v~~~  235 (526)
                      +.+++.+||+|+...  +...++....  ......+|+|+..
T Consensus        39 ~~l~~~~~dlillD~~mp~~~g~~~~~~lr~~~~~~piI~lt   80 (122)
T d1kgsa2          39 YMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLT   80 (122)
T ss_dssp             HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHHhhCccccccccccccchhHHHHHHHHhcCCCCcEEEEc
Confidence            667778999999853  3333333222  2233456766543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=89.27  E-value=0.22  Score=43.73  Aligned_cols=58  Identities=12%  Similarity=0.091  Sum_probs=39.9

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      |||++.         ||.+..-..|++.|.++||+|..+.....                          .+.-...+.+
T Consensus         2 MKIlIt---------GasGfiG~~l~~~L~~~g~~Vi~~~r~~~--------------------------D~~d~~~~~~   46 (281)
T d1vl0a_           2 MKILIT---------GANGQLGREIQKQLKGKNVEVIPTDVQDL--------------------------DITNVLAVNK   46 (281)
T ss_dssp             EEEEEE---------STTSHHHHHHHHHHTTSSEEEEEECTTTC--------------------------CTTCHHHHHH
T ss_pred             CEEEEE---------CCCCHHHHHHHHHHHhCCCEEEEeechhc--------------------------cCCCHHHHHH
Confidence            998665         56667777899999999999977643210                          1112345677


Q ss_pred             HHHhcCCCEEEEC
Q 009759          199 EVARFKPDIIHAS  211 (526)
Q Consensus       199 ~l~~~~pDiV~~~  211 (526)
                      +++..+||+|+-.
T Consensus        47 ~l~~~~~d~vih~   59 (281)
T d1vl0a_          47 FFNEKKPNVVINC   59 (281)
T ss_dssp             HHHHHCCSEEEEC
T ss_pred             HHHHcCCCEEEee
Confidence            8888899987643

>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Escherichia coli [TaxId: 562]

Probab=89.19  E-value=1.6  Score=32.39  Aligned_cols=75  Identities=12%  Similarity=0.099  Sum_probs=48.0

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      ||||+|-+. +        .....+.+.|...||+|......                                 .....
T Consensus         1 mrILvVDDd-~--------~~~~~l~~~L~~~G~~v~~a~~g---------------------------------~eal~   38 (119)
T d2pl1a1           1 MRVLVVEDN-A--------LLRHHLKVQIQDAGHQVDDAEDA---------------------------------KEADY   38 (119)
T ss_dssp             CEEEEECSC-H--------HHHHHHHHHHHHTTCEEEEESSH---------------------------------HHHHH
T ss_pred             CEEEEEeCC-H--------HHHHHHHHHHHHCCCEEEEECCH---------------------------------HHHHH
Confidence            799888663 2        45677888899999998865321                                 24556


Q ss_pred             HHHhcCCCEEEECC--CchHHHHHHH--HHHhcCCCEEEEE
Q 009759          199 EVARFKPDIIHASS--PGIMVFGALI--IAKLLCVPIVMSY  235 (526)
Q Consensus       199 ~l~~~~pDiV~~~~--~~~~~~~~~~--~~~~~~~p~v~~~  235 (526)
                      .+++.+||+|++..  |...++..+.  ......+|+++..
T Consensus        39 ~l~~~~~dliilD~~mP~~~G~e~~~~i~~~~~~~pvi~lt   79 (119)
T d2pl1a1          39 YLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLT   79 (119)
T ss_dssp             HHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEE
T ss_pred             HHHhcccceeehhccCCCchhHHHHHHHHhcCcccceEeee
Confidence            67778999999964  3333333222  2233467776543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=88.57  E-value=0.35  Score=44.35  Aligned_cols=83  Identities=13%  Similarity=0.092  Sum_probs=43.1

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCce-eccccccCCCccccccchhcccHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAK-LIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      ||++|+        ||.+..-..|++.|.++||+|+.+......... .... ..................+.-...+.+
T Consensus         2 K~vLIT--------GatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   72 (357)
T d1db3a_           2 KVALIT--------GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNT-ERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTR   72 (357)
T ss_dssp             CEEEEE--------TTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHH
T ss_pred             CEEEEe--------CCCcHHHHHHHHHHHHCcCEEEEEECCCcccch-hhHHHHHhhhhhcCCCeEEEEeecCCHHHHHH
Confidence            566665        666677789999999999999887643211000 0000 000000000011111222344567788


Q ss_pred             HHHhcCCCEEEEC
Q 009759          199 EVARFKPDIIHAS  211 (526)
Q Consensus       199 ~l~~~~pDiV~~~  211 (526)
                      .+++.+||+|+-.
T Consensus        73 ~~~~~~~d~v~h~   85 (357)
T d1db3a_          73 ILREVQPDEVYNL   85 (357)
T ss_dssp             HHHHHCCSEEEEC
T ss_pred             HHhccCCCEEEEe
Confidence            8888899987653

>d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: DsrEFH-like
superfamily: DsrEFH-like
family: DsrEF-like
domain: tRNA 2-thiouridine synthesizing protein D, TusD
species: Escherichia coli [TaxId: 562]

Probab=88.51  E-value=0.4  Score=36.64  Aligned_cols=42  Identities=24%  Similarity=0.269  Sum_probs=32.3

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEE-EEEeCCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVM-VVTTHEG  162 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~-vi~~~~~  162 (526)
                      ||++|+....|+  .+......+.+++++.++||+|. |+...++
T Consensus         1 Mk~~i~v~~~P~--~~~~a~~A~~fA~aal~~Gh~V~~vF~~~dG   43 (128)
T d2d1pa1           1 MRFAIVVTGPAY--GTQQASSAFQFAQALIADGHELSSVFFYREG   43 (128)
T ss_dssp             CEEEEEECSCSS--SSSHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred             CEEEEEEecCCC--CcHHHHHHHHHHHHHHhCCCceeEEEEechH
Confidence            899899886553  34556778999999999999994 7765543

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=87.62  E-value=0.6  Score=34.96  Aligned_cols=34  Identities=24%  Similarity=0.331  Sum_probs=26.7

Q ss_pred             CCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEe
Q 009759          117 RPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTT  159 (526)
Q Consensus       117 ~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~  159 (526)
                      ++||||+|-+.         ......+.+.|.+.||+|..+..
T Consensus         1 qp~rILvVdDd---------~~~~~~l~~~L~~~g~~v~~~~~   34 (118)
T d2b4aa1           1 QPFRVTLVEDE---------PSHATLIQYHLNQLGAEVTVHPS   34 (118)
T ss_dssp             CCCEEEEECSC---------HHHHHHHHHHHHHTTCEEEEESS
T ss_pred             CCCEEEEEECC---------HHHHHHHHHHHHhcCCCeEEECC
Confidence            46999999663         25677888899999999997753

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=87.53  E-value=0.62  Score=42.69  Aligned_cols=79  Identities=10%  Similarity=0.074  Sum_probs=43.4

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      ||||+.         ||.+..-..|++.|.+.||+|.+...............  ..  ............+.-...+.+
T Consensus         1 MkILIt---------G~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~--~~--~~~~~~~~~~~Dl~d~~~l~~   67 (361)
T d1kewa_           1 MKILIT---------GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS--DI--SESNRYNFEHADICDSAEITR   67 (361)
T ss_dssp             CEEEEE---------STTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT--TT--TTCTTEEEEECCTTCHHHHHH
T ss_pred             CEEEEE---------CCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHH--hh--hhcCCcEEEEccCCCHHHHHH
Confidence            898555         66667778899999999999876654332111111000  00  000000111122333456777


Q ss_pred             HHHhcCCCEEEE
Q 009759          199 EVARFKPDIIHA  210 (526)
Q Consensus       199 ~l~~~~pDiV~~  210 (526)
                      +++..+||+|+-
T Consensus        68 ~~~~~~~d~Vih   79 (361)
T d1kewa_          68 IFEQYQPDAVMH   79 (361)
T ss_dssp             HHHHHCCSEEEE
T ss_pred             HHHhCCCCEEEE
Confidence            788889997653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=87.42  E-value=0.51  Score=33.60  Aligned_cols=34  Identities=9%  Similarity=0.046  Sum_probs=24.0

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCC
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHE  161 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~  161 (526)
                      ..||+++.-       |+   .-...++.|.++|++|+++-...
T Consensus         5 ~K~v~ViGl-------G~---sG~s~a~~L~~~g~~v~~~D~~~   38 (93)
T d2jfga1           5 GKNVVIIGL-------GL---TGLSCVDFFLARGVTPRVMDTRM   38 (93)
T ss_dssp             TCCEEEECC-------SH---HHHHHHHHHHHTTCCCEEEESSS
T ss_pred             CCEEEEEeE-------CH---HHHHHHHHHHHCCCEEEEeeCCc
Confidence            357877732       22   33457899999999999987644

>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional activator sigm54 (NtrC1), N-terminal domain
species: Aquifex aeolicus [TaxId: 63363]

Probab=87.38  E-value=1.3  Score=33.98  Aligned_cols=74  Identities=8%  Similarity=0.027  Sum_probs=46.4

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      ||||+|-+. +        .....+.+.|...||+|..+...                                 .....
T Consensus         1 mkILiVDDd-~--------~~~~~l~~~L~~~g~~v~~a~~~---------------------------------~eAl~   38 (137)
T d1ny5a1           1 MNVLVIEDD-K--------VFRGLLEEYLSMKGIKVESAERG---------------------------------KEAYK   38 (137)
T ss_dssp             CEEEEECCC-H--------HHHHHHHHHHHHHTCEEEEESSH---------------------------------HHHHH
T ss_pred             CEEEEEecC-H--------HHHHHHHHHHHHCCCEEEEECCH---------------------------------HHHHH
Confidence            799998663 2        45667777788889998865321                                 24556


Q ss_pred             HHHhcCCCEEEECC--CchHHHHH--HHHHHhcCCCEEEE
Q 009759          199 EVARFKPDIIHASS--PGIMVFGA--LIIAKLLCVPIVMS  234 (526)
Q Consensus       199 ~l~~~~pDiV~~~~--~~~~~~~~--~~~~~~~~~p~v~~  234 (526)
                      .+++..||+|++..  +...++..  .+......+|+|+.
T Consensus        39 ~l~~~~~dlvilD~~mp~~~G~e~~~~lr~~~~~~piI~l   78 (137)
T d1ny5a1          39 LLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVI   78 (137)
T ss_dssp             HHHHSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEE
T ss_pred             HhhccccccchHHHhhhhhhHHHHHHHHHHhCCCCCEEEE
Confidence            66777999999853  33333332  22233446776653

>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: TorCAD operon transcriptional regulator TorD, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.23  E-value=2.8  Score=31.00  Aligned_cols=74  Identities=15%  Similarity=0.160  Sum_probs=47.7

Q ss_pred             CcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHH
Q 009759          118 PRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRII  197 (526)
Q Consensus       118 ~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (526)
                      +||||+|-+.         ......+...|.+.||+|......                                 ....
T Consensus         1 P~rILiVDDd---------~~~~~~l~~~L~~~g~~v~~a~~~---------------------------------~~a~   38 (120)
T d1zgza1           1 PHHIVIVEDE---------PVTQARLQSYFTQEGYTVSVTASG---------------------------------AGLR   38 (120)
T ss_dssp             CCEEEEECSS---------HHHHHHHHHHHHHTTCEEEEESSH---------------------------------HHHH
T ss_pred             CCEEEEEeCC---------HHHHHHHHHHHHHCCCEEEEECCH---------------------------------HHHH
Confidence            4799888663         256678889999999999876431                                 2555


Q ss_pred             HHHHhcCCCEEEECC--CchHHHHHHH-HHHhcCCCEEE
Q 009759          198 SEVARFKPDIIHASS--PGIMVFGALI-IAKLLCVPIVM  233 (526)
Q Consensus       198 ~~l~~~~pDiV~~~~--~~~~~~~~~~-~~~~~~~p~v~  233 (526)
                      +.+++.+||+|+...  +...++..+. ......+|+|+
T Consensus        39 ~~~~~~~~dliilD~~mp~~~g~~~~~~~~~~~~~piI~   77 (120)
T d1zgza1          39 EIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIIL   77 (120)
T ss_dssp             HHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEE
T ss_pred             HHHHhcCCCEEeeehhhccchhHHHHHHHhccCCCeEEE
Confidence            677788999999854  3333333222 22334556554

>d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: DsrEFH-like
superfamily: DsrEFH-like
family: DsrEF-like
domain: Sulfurtransferase DsrE
species: Chromatium vinosum [TaxId: 1049]

Probab=87.11  E-value=0.53  Score=36.02  Aligned_cols=41  Identities=24%  Similarity=0.346  Sum_probs=32.0

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeE-EEEEeCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEV-MVVTTHE  161 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V-~vi~~~~  161 (526)
                      ||++|+....|+  .+-.....+.+++++.+.||+| .|+...+
T Consensus         1 Mk~~i~v~~~P~--~~~~a~~al~fA~aal~~gh~V~~vFf~~d   42 (130)
T d2hy5a1           1 MKFALQINEGPY--QHQASDSAYQFAKAALEKGHEIFRVFFYHD   42 (130)
T ss_dssp             CEEEEEECSCTT--TSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred             CEEEEEEcCCCC--CcHHHHHHHHHHHHHHHCCCeEEEEEEecc
Confidence            899999876554  3456677899999999999999 4776544

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=87.09  E-value=2  Score=33.87  Aligned_cols=124  Identities=10%  Similarity=0.038  Sum_probs=68.6

Q ss_pred             CCCcEEEEEecccccccHHHHHHHHHhCCCc-EEEEEeCCccHHHHHHHhcCCCeEEecccChhhHHHHHHcCcEEEecC
Q 009759          321 PDKPLIVHVGRLGVEKSLDFLKRVMDRLPEA-RIAFIGDGPYREELEKMFTGMPAVFTGMLLGEELSQAYASGDVFVMPS  399 (526)
Q Consensus       321 ~~~~~i~~vG~l~~~Kg~~~li~a~~~l~~~-~l~ivG~g~~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~aDv~v~ps  399 (526)
                      -+...++.+|.   ..--..+++.+... ++ ++.+++..  .+..+++..+.+....   +.+++.+.+..+|++|...
T Consensus        22 l~~~~ilviGa---G~~g~~v~~~L~~~-g~~~i~v~nRt--~~ka~~l~~~~~~~~~---~~~~~~~~l~~~Divi~at   92 (159)
T d1gpja2          22 LHDKTVLVVGA---GEMGKTVAKSLVDR-GVRAVLVANRT--YERAVELARDLGGEAV---RFDELVDHLARSDVVVSAT   92 (159)
T ss_dssp             CTTCEEEEESC---CHHHHHHHHHHHHH-CCSEEEEECSS--HHHHHHHHHHHTCEEC---CGGGHHHHHHTCSEEEECC
T ss_pred             cccCeEEEECC---CHHHHHHHHHHHhc-CCcEEEEEcCc--HHHHHHHHHhhhcccc---cchhHHHHhccCCEEEEec
Confidence            34556777774   11123455555443 44 57777743  3444455554455443   4479999999999999875


Q ss_pred             CC-C-CCcHHHHHHHH----cCCcEEEeCCCCCCceecccCCCceeEeeCCCCHHHHHHHHHH
Q 009759          400 ES-E-TLGLVVLEAMS----SGIPVVGVRAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEP  456 (526)
Q Consensus       400 ~~-e-~~~~~ilEAma----~G~PvI~~~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~  456 (526)
                      .. + -+.-..++...    .+.|.+.-|.+-.+++=+...+-.+.+++   |.++|.+...+
T Consensus        93 ss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr~vd~~v~~~~~v~l~---~ld~l~~~~~~  152 (159)
T d1gpja2          93 AAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVEEGVENIEDVEVR---TIDDLRVIARE  152 (159)
T ss_dssp             SSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGGGSTTEEEE---EHHHHHHHHHH
T ss_pred             CCCCccccHhhhHHHHHhcccCCCeEEEeecCCCCcChhhhccCCeEEE---eHHHHHHHHHH
Confidence            42 2 24445554432    47899988886333332111222233344   56666665544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.60  E-value=0.3  Score=40.20  Aligned_cols=33  Identities=27%  Similarity=0.380  Sum_probs=27.2

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTH  160 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~  160 (526)
                      |||+++         ||.+..-..+++.|.+.||+|.++..+
T Consensus         1 Mki~vi---------gGaG~iG~alA~~la~~G~~V~l~~R~   33 (212)
T d1jaya_           1 MRVALL---------GGTGNLGKGLALRLATLGHEIVVGSRR   33 (212)
T ss_dssp             CEEEEE---------TTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CEEEEE---------eCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            899877         454567788999999999999999754

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=86.09  E-value=3.4  Score=30.54  Aligned_cols=74  Identities=18%  Similarity=0.238  Sum_probs=46.7

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      .|||+|-+.         ......+.+.|.+.||+|..+...                                 ....+
T Consensus         3 krILiVDDd---------~~~~~~l~~~L~~~g~~v~~a~~~---------------------------------~~al~   40 (121)
T d1mvoa_           3 KKILVVDDE---------ESIVTLLQYNLERSGYDVITASDG---------------------------------EEALK   40 (121)
T ss_dssp             CEEEEECSC---------HHHHHHHHHHHHHTTCEEEEESSH---------------------------------HHHHH
T ss_pred             CCEEEEECC---------HHHHHHHHHHHHHCCCEEEEECCH---------------------------------HHHHH
Confidence            489888653         256677888999999999876432                                 24556


Q ss_pred             HHHhcCCCEEEECC--CchHHHHHHHH--HHhcCCCEEEE
Q 009759          199 EVARFKPDIIHASS--PGIMVFGALII--AKLLCVPIVMS  234 (526)
Q Consensus       199 ~l~~~~pDiV~~~~--~~~~~~~~~~~--~~~~~~p~v~~  234 (526)
                      .+++.+||+|+...  +...++.....  ......|+++.
T Consensus        41 ~l~~~~~dlillD~~mp~~~G~~~~~~~r~~~~~~~ii~l   80 (121)
T d1mvoa_          41 KAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILML   80 (121)
T ss_dssp             HHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHhcccccEEEecccccCCCCchhhhhhhccCCCCEEEEE
Confidence            67778999999854  33333332222  22334666543

>d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: Prokaryotic glutathione synthetase, N-terminal domain
domain: Prokaryotic glutathione synthetase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.61  E-value=0.36  Score=36.51  Aligned_cols=41  Identities=10%  Similarity=0.194  Sum_probs=33.6

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHE  161 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~  161 (526)
                      |||+|+.+  |+....-.......|+++.+++||+|.++.++.
T Consensus         2 mkI~FimD--pie~l~~~kDTT~~Lm~eAq~Rg~~v~~~~~~d   42 (122)
T d1gsaa1           2 IKLGIVMD--PIANINIKKDSSFAMLLEAQRRGYELHYMEMGD   42 (122)
T ss_dssp             CEEEEECS--CGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGG
T ss_pred             cEEEEEeC--CHHHCCCCCChHHHHHHHHHHCCCeEEEEecCc
Confidence            89999987  455555566788999999999999999988654

>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sensor kinase protein RcsC, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.42  E-value=5.4  Score=29.96  Aligned_cols=79  Identities=13%  Similarity=0.150  Sum_probs=48.9

Q ss_pred             CCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccH
Q 009759          115 NSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSP  194 (526)
Q Consensus       115 ~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (526)
                      ....||||+|-+. +        .....+.+.|...|++|......                                 .
T Consensus         5 ~~~~~~ILiVDD~-~--------~~~~~l~~~L~~~g~~v~~a~~g---------------------------------~   42 (133)
T d2ayxa1           5 DNDDMMILVVDDH-P--------INRRLLADQLGSLGYQCKTANDG---------------------------------V   42 (133)
T ss_dssp             CCCCCEEEEEESS-H--------HHHHHHHHHHHHHTSEEEEECCS---------------------------------H
T ss_pred             CCCCCEEEEEECC-H--------HHHHHHHHHHHHcCCEEEEECcH---------------------------------H
Confidence            3456899999764 2        45567777888899998765332                                 1


Q ss_pred             HHHHHHHhcCCCEEEECC--CchHHH--HHHHHHHhcCCCEEEEE
Q 009759          195 RIISEVARFKPDIIHASS--PGIMVF--GALIIAKLLCVPIVMSY  235 (526)
Q Consensus       195 ~l~~~l~~~~pDiV~~~~--~~~~~~--~~~~~~~~~~~p~v~~~  235 (526)
                      ...+.+.+..||+|++..  |...++  ...+......+|+++..
T Consensus        43 ea~~~~~~~~~dlillD~~mP~~dG~el~~~ir~~~~~~pii~lt   87 (133)
T d2ayxa1          43 DALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVT   87 (133)
T ss_dssp             HHHHHHHHSCCSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEEE
T ss_pred             HHHHHHhccCceEEEEeccCCCCCHHHHHHHHHHhCCCCCEEEEe
Confidence            345567778999999853  332222  22233334467776543

>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: DNA-binding response regulator MicA, N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=85.08  E-value=3.3  Score=30.46  Aligned_cols=75  Identities=23%  Similarity=0.229  Sum_probs=47.6

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      +|||+|-+.         ......+...|.+.||+|..+...                                 ....+
T Consensus         1 KrILiVdDd---------~~~~~~l~~~L~~~g~~v~~a~~~---------------------------------~eal~   38 (117)
T d2a9pa1           1 KKILIVDDE---------KPISDIIKFNMTKEGYEVVTAFNG---------------------------------REALE   38 (117)
T ss_dssp             CEEEEECSC---------HHHHHHHHHHHHHTTCEEEEESSH---------------------------------HHHHH
T ss_pred             CEEEEEECC---------HHHHHHHHHHHHHCCCEEEEECCH---------------------------------HHHHH
Confidence            478888653         255677888899999999866321                                 24556


Q ss_pred             HHHhcCCCEEEECC--CchHHHHHH-HHHHhcCCCEEEEE
Q 009759          199 EVARFKPDIIHASS--PGIMVFGAL-IIAKLLCVPIVMSY  235 (526)
Q Consensus       199 ~l~~~~pDiV~~~~--~~~~~~~~~-~~~~~~~~p~v~~~  235 (526)
                      .+++.+||+|+...  +...++..+ .+.+...+|+|+..
T Consensus        39 ~~~~~~~dlillD~~mp~~~G~~~~~~i~~~~~~pvI~lt   78 (117)
T d2a9pa1          39 QFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLS   78 (117)
T ss_dssp             HHHHHCCSEEEECSSCSSSCHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHhcCCCEEEeccccCCCCccHHHHHHHhCCCCCEEEEe
Confidence            67778999999864  333333222 23344567876543

>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator PleD, receiver domain
species: Caulobacter crescentus [TaxId: 155892]

Probab=84.69  E-value=4  Score=31.06  Aligned_cols=108  Identities=21%  Similarity=0.175  Sum_probs=65.3

Q ss_pred             EEEEEeCCc-cHHHHHHHhcCCCeEEecccChhhHHHHHHc--CcEEEecCCC-CCCcHHHHHHHH-----cCCcEEE-e
Q 009759          352 RIAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSES-ETLGLVVLEAMS-----SGIPVVG-V  421 (526)
Q Consensus       352 ~l~ivG~g~-~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~--aDv~v~ps~~-e~~~~~ilEAma-----~G~PvI~-~  421 (526)
                      ++.|+-+.+ ..+.+..+....+..+...-+.++..+++..  .|++++-... +.-|..+++.+.     ..+|||. |
T Consensus         3 rILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~dlil~D~~~p~~~G~~~~~~ir~~~~~~~~piI~lt   82 (139)
T d1w25a1           3 RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLIT   82 (139)
T ss_dssp             EEEEECSSTTHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEE
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEEccchhhhhhhhcccceeeeeeccccCCCchHHHHHhhhcccccCCCEEEEE
Confidence            556665443 4455555555545444444444555555544  6888765443 344565666553     3578875 4


Q ss_pred             CCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh
Q 009759          422 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  459 (526)
Q Consensus       422 ~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~  459 (526)
                      ..+.....+...+.|.++++..|.+.++|...|..++.
T Consensus        83 ~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lr  120 (139)
T d1w25a1          83 ALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTR  120 (139)
T ss_dssp             CSSCHHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence            44443333222266889999999999999999987764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.62  E-value=0.46  Score=43.53  Aligned_cols=37  Identities=14%  Similarity=0.046  Sum_probs=30.2

Q ss_pred             CCCCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEe
Q 009759          114 NNSRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTT  159 (526)
Q Consensus       114 ~~~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~  159 (526)
                      .+++.||||+.         ||.+..-..+++.|.++||+|+++..
T Consensus        11 ~~~~nMKILVT---------GgsGfIGs~lv~~L~~~g~~V~~~d~   47 (363)
T d2c5aa1          11 WPSENLKISIT---------GAGGFIASHIARRLKHEGHYVIASDW   47 (363)
T ss_dssp             CTTSCCEEEEE---------TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCCCEEEEE---------CCCCHHHHHHHHHHHHCcCEEEEEeC
Confidence            36688999765         66667778999999999999998854

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.34  E-value=4.5  Score=29.95  Aligned_cols=73  Identities=12%  Similarity=0.195  Sum_probs=46.0

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      -+||+|-+. +        .....+.+.|.+.||+|..+...                                 ....+
T Consensus         4 ~~ILIVDDd-~--------~~~~~l~~~L~~~g~~v~~a~~~---------------------------------~~a~~   41 (123)
T d1krwa_           4 GIVWVVDDD-S--------SIRWVLERALAGAGLTCTTFENG---------------------------------NEVLA   41 (123)
T ss_dssp             CEEEEESSS-H--------HHHHHHHHHHHHTTCEEEEESSS---------------------------------HHHHH
T ss_pred             CEEEEEECC-H--------HHHHHHHHHHHHCCCEEEEeCCH---------------------------------HHHHH
Confidence            478888653 2        45667788888999999876432                                 24556


Q ss_pred             HHHhcCCCEEEECC--CchHHHH--HHHHHHhcCCCEEE
Q 009759          199 EVARFKPDIIHASS--PGIMVFG--ALIIAKLLCVPIVM  233 (526)
Q Consensus       199 ~l~~~~pDiV~~~~--~~~~~~~--~~~~~~~~~~p~v~  233 (526)
                      .+++.+||+|++..  +...++.  ..+......+|+|+
T Consensus        42 ~l~~~~~dlii~D~~mp~~~G~el~~~l~~~~~~~piI~   80 (123)
T d1krwa_          42 ALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII   80 (123)
T ss_dssp             HHTTCCCSEEEECCSSSSSTTHHHHHHHHHHSSSCCEEE
T ss_pred             HHHhCCCCEEEehhhcCCchHHHHHHHHHHhCCCCeEEE
Confidence            67778999999964  3333332  22223445678765

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.17  E-value=5.3  Score=29.47  Aligned_cols=74  Identities=18%  Similarity=0.185  Sum_probs=47.9

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      |||+|-+.         ......+.+.|.+.||+|..+...                                 ....+.
T Consensus         3 kILiVDD~---------~~~~~~l~~~L~~~g~~v~~a~~~---------------------------------~eal~~   40 (121)
T d1ys7a2           3 RVLVVDDD---------SDVLASLERGLRLSGFEVATAVDG---------------------------------AEALRS   40 (121)
T ss_dssp             EEEEECSC---------HHHHHHHHHHHHHTTCEEEEESSH---------------------------------HHHHHH
T ss_pred             EEEEEECC---------HHHHHHHHHHHHHCCCEEEEECCH---------------------------------HHHHHH
Confidence            89888653         255677888999999998866331                                 245566


Q ss_pred             HHhcCCCEEEECC--CchHHHHHH--HHHHhcCCCEEEEE
Q 009759          200 VARFKPDIIHASS--PGIMVFGAL--IIAKLLCVPIVMSY  235 (526)
Q Consensus       200 l~~~~pDiV~~~~--~~~~~~~~~--~~~~~~~~p~v~~~  235 (526)
                      +++.+||+|++..  +...++...  +......+|+|+..
T Consensus        41 ~~~~~~dlvl~D~~mP~~~G~el~~~ir~~~~~~piI~lt   80 (121)
T d1ys7a2          41 ATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLS   80 (121)
T ss_dssp             HHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHhCCCCEEEEEeeccCcccHHHHHHHHhcCCCCEEEEEE
Confidence            7778999999954  443333322  22234468876533

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=82.70  E-value=0.49  Score=41.66  Aligned_cols=60  Identities=17%  Similarity=0.233  Sum_probs=37.1

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      ||||+.         ||.+..-..+++.|.+.|+.|.+......    +                   ...+.-...+.+
T Consensus         1 MKILIt---------G~tGfiG~~l~~~L~~~g~~v~~~~~~~~----~-------------------~~Dl~~~~~~~~   48 (298)
T d1n2sa_           1 MNILLF---------GKTGQVGWELQRSLAPVGNLIALDVHSKE----F-------------------CGDFSNPKGVAE   48 (298)
T ss_dssp             CEEEEE---------CTTSHHHHHHHHHTTTTSEEEEECTTCSS----S-------------------CCCTTCHHHHHH
T ss_pred             CEEEEE---------CCCCHHHHHHHHHHHhCCCEEEEECCCcc----c-------------------cCcCCCHHHHHH
Confidence            898766         55556667889999999986544221110    0                   011122346777


Q ss_pred             HHHhcCCCEEEE
Q 009759          199 EVARFKPDIIHA  210 (526)
Q Consensus       199 ~l~~~~pDiV~~  210 (526)
                      .+++.+||+|+-
T Consensus        49 ~i~~~~~D~Vih   60 (298)
T d1n2sa_          49 TVRKLRPDVIVN   60 (298)
T ss_dssp             HHHHHCCSEEEE
T ss_pred             HHHHcCCCEEEE
Confidence            888889998753

>d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like I
superfamily: Periplasmic binding protein-like I
family: L-arabinose binding protein-like
domain: Purine repressor (PurR), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.50  E-value=10  Score=32.09  Aligned_cols=89  Identities=11%  Similarity=0.071  Sum_probs=52.8

Q ss_pred             EEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHHH
Q 009759          120 RIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISE  199 (526)
Q Consensus       120 kIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  199 (526)
                      +|.++.....-+   =....+..+-+++.+.|+++.++.......                           ....+.+.
T Consensus         2 tIg~i~~~~~~p---f~~~~~~gi~~~~~~~gy~~~~~~~~~d~~---------------------------~~~~~~~~   51 (282)
T d1dbqa_           2 SIGLLATSSEAA---YFAEIIEAVEKNCFQKGYTLILGNAWNNLE---------------------------KQRAYLSM   51 (282)
T ss_dssp             EEEEEESCTTSH---HHHHHHHHHHHHHHHHTCEEEEEECTTCHH---------------------------HHHHHHHH
T ss_pred             EEEEEeCCCCCH---HHHHHHHHHHHHHHHcCCEEEEEeCCCCHH---------------------------HHHHHHHH
Confidence            688886543211   234556778888999999998876543211                           11255566


Q ss_pred             HHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEEEEecC
Q 009759          200 VARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTH  238 (526)
Q Consensus       200 l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~  238 (526)
                      +...+.|.+++.................++|+|+.....
T Consensus        52 l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~   90 (282)
T d1dbqa_          52 MAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGE   90 (282)
T ss_dssp             HHHTTCSEEEEECSCCCHHHHHHHHHTTTSCEEEEECSS
T ss_pred             HHhcCCCEEeeecccccchhhhhHHhhcCCCceEEEecc
Confidence            667789987765432222222233455689998865543

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=82.45  E-value=5.5  Score=29.45  Aligned_cols=110  Identities=15%  Similarity=0.195  Sum_probs=66.9

Q ss_pred             CcEEEEEeCCc-cHHHHHHHhcCCCeEEecccChhhHHHHHHcC--cEEEecCC-CCCCcHHHHHHHH---cCCcEEEe-
Q 009759          350 EARIAFIGDGP-YREELEKMFTGMPAVFTGMLLGEELSQAYASG--DVFVMPSE-SETLGLVVLEAMS---SGIPVVGV-  421 (526)
Q Consensus       350 ~~~l~ivG~g~-~~~~l~~l~~~~~V~~~g~v~~~~l~~~~~~a--Dv~v~ps~-~e~~~~~ilEAma---~G~PvI~~-  421 (526)
                      +.++.|+=+.+ ....++...+..+......-+.++..+++...  |++|+=.. .+.-|..+++.+.   ..+|+|.- 
T Consensus         3 ~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~~~~~~~dlvi~D~~mp~~~G~e~~~~lr~~~~~~~iI~lt   82 (123)
T d1dbwa_           3 DYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVIT   82 (123)
T ss_dssp             CCEEEEEESSHHHHHHHHHHHHHTTCEEEEESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEE
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHhhcCCcEEEEeccCccccchHHHHHHHhcCCCCeEEEEE
Confidence            45666666543 34445555544444444444446666666554  67765433 3555777777664   46777644 


Q ss_pred             CCCCCCceecccCCCceeEeeCCCCHHHHHHHHHHhhh
Q 009759          422 RAGGIPDIIPEDQDGKIGYLFNPGDLDDCLSKLEPLLY  459 (526)
Q Consensus       422 ~~gg~~e~v~~~~~~~~g~~~~~~d~~~la~ai~~ll~  459 (526)
                      ..+.........+.|..+++..|-+.+++.++|.++++
T Consensus        83 ~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~a~e  120 (123)
T d1dbwa_          83 GHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASE  120 (123)
T ss_dssp             CTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHT
T ss_pred             eeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence            44433222222267888999999999999999988765

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.33  E-value=1.2  Score=34.16  Aligned_cols=76  Identities=12%  Similarity=0.114  Sum_probs=52.6

Q ss_pred             EEEEEe-CCccHHHHHHHh-cCCCeEEecccChhhHHHHH--HcCcEEEecCCCCCCcHHHHHHHHcCCcEEEeCCCCCC
Q 009759          352 RIAFIG-DGPYREELEKMF-TGMPAVFTGMLLGEELSQAY--ASGDVFVMPSESETLGLVVLEAMSSGIPVVGVRAGGIP  427 (526)
Q Consensus       352 ~l~ivG-~g~~~~~l~~l~-~~~~V~~~g~v~~~~l~~~~--~~aDv~v~ps~~e~~~~~ilEAma~G~PvI~~~~gg~~  427 (526)
                      ++.|+| .|..-..+.+.+ +..++++.+-++..+....+  ..+|++|=-|..+...-.+-.+..+|+|+|.-.+|--.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~~~   80 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTA   80 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCCCH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEeccccch
Confidence            456777 576666655544 34466766666543322222  47899999888888888888999999999987777544

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=82.32  E-value=4.4  Score=29.80  Aligned_cols=74  Identities=9%  Similarity=0.139  Sum_probs=45.8

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      .|||+|-+. +        .....+.+.|.+.||+|......                                 ....+
T Consensus         2 krILvVDD~-~--------~~~~~l~~~L~~~g~~v~~a~~g---------------------------------~eal~   39 (119)
T d1peya_           2 EKILIVDDQ-S--------GIRILLNEVFNKEGYQTFQAANG---------------------------------LQALD   39 (119)
T ss_dssp             CEEEEECSC-H--------HHHHHHHHHHHHTTCEEEEESSH---------------------------------HHHHH
T ss_pred             CEEEEEeCC-H--------HHHHHHHHHHHHcCCEEEEeCCH---------------------------------HHHHH
Confidence            489888653 1        45567788888999998865321                                 24456


Q ss_pred             HHHhcCCCEEEECC--CchHHHHH--HHHHHhcCCCEEEE
Q 009759          199 EVARFKPDIIHASS--PGIMVFGA--LIIAKLLCVPIVMS  234 (526)
Q Consensus       199 ~l~~~~pDiV~~~~--~~~~~~~~--~~~~~~~~~p~v~~  234 (526)
                      .+++.+||+|++..  |...++..  .+......+|+|+.
T Consensus        40 ~~~~~~~dlillD~~mP~~~G~el~~~lr~~~~~~pvi~l   79 (119)
T d1peya_          40 IVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIM   79 (119)
T ss_dssp             HHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHHhCCCCEEEEeccCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence            67778999999853  33333322  22233346776654

>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/glutamate racemase
family: Aspartate/glutamate racemase
domain: Glutamate racemase
species: Aquifex pyrophilus [TaxId: 2714]

Probab=81.77  E-value=3.4  Score=29.75  Aligned_cols=43  Identities=16%  Similarity=0.086  Sum_probs=27.3

Q ss_pred             cccHHHHHHHHhcCCCEEEECCCchHHHHHHHHHHhcCCCEEE
Q 009759          191 ALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVM  233 (526)
Q Consensus       191 ~~~~~l~~~l~~~~pDiV~~~~~~~~~~~~~~~~~~~~~p~v~  233 (526)
                      .....+.+++.+.++|+|++-.........-.+.....+|++-
T Consensus        49 ~~~~~~~~~l~~~~~~~iViACNTaS~~al~~lr~~~~~PiiG   91 (105)
T d1b74a1          49 RYSLECAGFLKDKGVDIIVVACNTASAYALERLKKEINVPVFG   91 (105)
T ss_dssp             HHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHSSSCEEE
T ss_pred             HHHHHHHHHHHHcCCCEEEEecCcHHHHHHHHHHHHCCCCEEE
Confidence            3445677788888999888755433333333445566888763

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=81.40  E-value=0.73  Score=36.61  Aligned_cols=34  Identities=18%  Similarity=0.041  Sum_probs=25.8

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCC
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEG  162 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~  162 (526)
                      |||+|+..       |   ..-..++..|.+.||+|+++.....
T Consensus         1 MkI~IiGa-------G---~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           1 MKITVLGC-------G---ALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             CEEEEECC-------S---HHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CEEEEECc-------C---HHHHHHHHHHHHCCCceEEEEcCHH
Confidence            89999842       2   3334588999999999999986553

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=81.25  E-value=6.6  Score=28.71  Aligned_cols=75  Identities=17%  Similarity=0.227  Sum_probs=46.4

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHHHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIIS  198 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (526)
                      +|||++-+.         ......+.+.|.+.|++|.-.+.+.                                ....+
T Consensus         2 krILivDD~---------~~~~~~l~~~L~~~g~~v~~~a~~~--------------------------------~~al~   40 (118)
T d1u0sy_           2 KRVLIVDDA---------AFMRMMLKDIITKAGYEVAGEATNG--------------------------------REAVE   40 (118)
T ss_dssp             CEEEEECSC---------HHHHHHHHHHHHHTTCEEEEEESSH--------------------------------HHHHH
T ss_pred             CEEEEEeCC---------HHHHHHHHHHHHHcCCceEEEECCH--------------------------------HHHHH
Confidence            589888653         2556677888889999986443221                                24556


Q ss_pred             HHHhcCCCEEEECC--CchHHHHHH--HHHHhcCCCEEEE
Q 009759          199 EVARFKPDIIHASS--PGIMVFGAL--IIAKLLCVPIVMS  234 (526)
Q Consensus       199 ~l~~~~pDiV~~~~--~~~~~~~~~--~~~~~~~~p~v~~  234 (526)
                      .+++.+||+|++..  +...++..+  +.....++|+|+.
T Consensus        41 ~~~~~~~dliilD~~mp~~~G~e~~~~ir~~~~~~pvi~l   80 (118)
T d1u0sy_          41 KYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVC   80 (118)
T ss_dssp             HHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEE
T ss_pred             HHHhccCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence            67778999999964  333333322  2233446786654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.98  E-value=2.3  Score=38.09  Aligned_cols=85  Identities=15%  Similarity=0.046  Sum_probs=45.4

Q ss_pred             cEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceec-cccccCC-CccccccchhcccHHH
Q 009759          119 RRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLI-GSRSFPC-PWYQKVPLSLALSPRI  196 (526)
Q Consensus       119 mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~l  196 (526)
                      +||++|+        ||.+..-..|++.|.++||+|..+......... ...... ....... .........+.-...+
T Consensus         1 kKI~LVT--------G~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   71 (347)
T d1t2aa_           1 RNVALIT--------GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT-GRIEHLYKNPQAHIEGNMKLHYGDLTDSTCL   71 (347)
T ss_dssp             CCEEEEE--------TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC-TTTGGGC---------CEEEEECCTTCHHHH
T ss_pred             CCEEEEe--------cCCcHHHHHHHHHHHHCcCEEEEEECCCcccch-hhHHHHhhchhhhccCCcEEEEeecCCchhh
Confidence            3786665        566677788999999999999998754321110 000000 0000000 0001111123344567


Q ss_pred             HHHHHhcCCCEEEECC
Q 009759          197 ISEVARFKPDIIHASS  212 (526)
Q Consensus       197 ~~~l~~~~pDiV~~~~  212 (526)
                      .+++.+.++++++.+.
T Consensus        72 ~~~~~~~~~~~v~~~~   87 (347)
T d1t2aa_          72 VKIINEVKPTEIYNLG   87 (347)
T ss_dssp             HHHHHHHCCSEEEECC
T ss_pred             HHHHhhcccceeeeee
Confidence            7777888888877654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.73  E-value=2.1  Score=38.19  Aligned_cols=27  Identities=15%  Similarity=0.027  Sum_probs=22.5

Q ss_pred             CchHHHHHHHHHHHHHCCCeEEEEEeC
Q 009759          134 SGYKNRFQNFIKYLREMGDEVMVVTTH  160 (526)
Q Consensus       134 gG~~~~~~~l~~~L~~~G~~V~vi~~~  160 (526)
                      ||.+..-..|++.|.++||+|..+...
T Consensus         8 GatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           8 GITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            566677788999999999999988754

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.53  E-value=8.7  Score=28.16  Aligned_cols=96  Identities=20%  Similarity=0.252  Sum_probs=56.7

Q ss_pred             HHHHHhcCCCeEEecccChhhHHHHHHc--CcEEEecCC-CCCCcHHHHHHH---HcCCcEEE-eCCCCCCceecccCCC
Q 009759          364 ELEKMFTGMPAVFTGMLLGEELSQAYAS--GDVFVMPSE-SETLGLVVLEAM---SSGIPVVG-VRAGGIPDIIPEDQDG  436 (526)
Q Consensus       364 ~l~~l~~~~~V~~~g~v~~~~l~~~~~~--aDv~v~ps~-~e~~~~~ilEAm---a~G~PvI~-~~~gg~~e~v~~~~~~  436 (526)
                      .+....+..+......-+.++..+.+..  .|++|+-.. .+.-|..+++.+   ...+|+|. |..+...+.....+.|
T Consensus        16 ~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~dlvl~D~~mP~~~G~el~~~ir~~~~~~piI~lt~~~~~~~~~~a~~~G   95 (121)
T d1ys7a2          16 SLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAG   95 (121)
T ss_dssp             HHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECCCTTTCCCTTTTTT
T ss_pred             HHHHHHHHCCCEEEEECCHHHHHHHHHhCCCCEEEEEeeccCcccHHHHHHHHhcCCCCEEEEEEeeCCHHHHHHHHHCC
Confidence            3333443333333333333444444443  477776543 344566666665   34688765 4444433333222678


Q ss_pred             ceeEeeCCCCHHHHHHHHHHhhh
Q 009759          437 KIGYLFNPGDLDDCLSKLEPLLY  459 (526)
Q Consensus       437 ~~g~~~~~~d~~~la~ai~~ll~  459 (526)
                      .++++..|-+.++|.++|.++++
T Consensus        96 a~dyl~KP~~~~~L~~~i~~~l~  118 (121)
T d1ys7a2          96 ADDYLVKPFVLAELVARVKALLR  118 (121)
T ss_dssp             CSEEEESSCCHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCHHHHHHHHHHHHH
Confidence            89999999999999999988864

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=80.16  E-value=4.2  Score=29.65  Aligned_cols=75  Identities=15%  Similarity=0.114  Sum_probs=46.5

Q ss_pred             CCCcEEEEEeccCCCCccCchHHHHHHHHHHHHHCCCeEEEEEeCCCCCccccCceeccccccCCCccccccchhcccHH
Q 009759          116 SRPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPQEFYGAKLIGSRSFPCPWYQKVPLSLALSPR  195 (526)
Q Consensus       116 ~~~mkIliv~~~~p~~~~gG~~~~~~~l~~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (526)
                      ....||+|+         ||+ .-.+.++.+..++|++|.++.++...+........+             ...+.-...
T Consensus         9 ~~~~kigIl---------GgG-QL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~~i-------------~~~~~d~~~   65 (111)
T d1kjqa2           9 PAATRVMLL---------GSG-ELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSH-------------VINMLDGDA   65 (111)
T ss_dssp             TTCCEEEEE---------SCS-HHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEE-------------ECCTTCHHH
T ss_pred             CCCCEEEEE---------eCC-HHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCCeEE-------------ECCCCCHHH
Confidence            344689888         332 456778888999999999998766543322111110             011122346


Q ss_pred             HHHHHHhcCCCEEEECCC
Q 009759          196 IISEVARFKPDIIHASSP  213 (526)
Q Consensus       196 l~~~l~~~~pDiV~~~~~  213 (526)
                      +.++..+.++|+|-...-
T Consensus        66 l~~~~~~~~~DviT~E~E   83 (111)
T d1kjqa2          66 LRRVVELEKPHYIVPEIE   83 (111)
T ss_dssp             HHHHHHHHCCSEEEECSS
T ss_pred             HHHHHHhhCCceEEEEec
Confidence            777777789999987654