Citrus Sinensis ID: 009777


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520------
MKRTFFRLRGKELSLILIVLVCTTIFVWTWDRTPFLATFLPPKSRFLWLSSDAFTNSVSPESQIHMNKDISTSAENKTVNYQEGQLSNILAPAGPVAETIPAKRKENTESLAEGQAKDKHVVEAEKNSSAENSTILTKTKENGKKNLGEKNSKLEKESVDRRSSADSANLSSSERIKADENSTMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL
ccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccEEEEcccccccccccccccccccccHHccccccccccccEEccccccccHHHHHHHHcccEEEEEccccHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEccccEEEEEEcccccccccccccccccccEEEEccccHHHHHccccccEEEEccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHc
ccccccHccHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccHHccccccccccccccccccccccccccccccccccccccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccHHHcccccHHHHHEcEcccccccccccHHHHHccEEEEEcccccHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccEEEEEccccEEEEEEEccEEEEccccccccccccEEEEEccccHHHHHHHccccEEEEEccEEEccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHccccEEEEEHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHc
MKRTFFRLRGKELSLILIVLVCTTIFVwtwdrtpflatflppksrflwlssdaftnsvspesqihmnkdistsaenktvnyqegqlsnilapagpvaetipakrkentESLAEGQAKDKHVVeaeknssaenstILTKTkengkknlgeknsklekesvdrrssadsanlssserikadenSTMLEQNQacnyakgkwvvddsrplysgahCKQWLSQMWACRLMQRTDFAYERlrwqpkdcqmeefegsqflTRTLAFIGDSLGRQQFQSLMCMVtggkerpdvedvgkeyglvkprgairpngwayrfpstnTTILYYWSAclcdldplnitnpateyamhldrppaFLRQYLHKFDVLVLntghhwnrgklkanrwvmhvggmpntnrKIADIAGAKNFTIHSIVSWVnsqlpehprlkafyrsisprhfvngdwntggscdnttpmsigkevlqdesgdysagsavkgtgvKLLDITALsqvrdeghisqYSITASRgvqdclhwclpgvpdtwNEILFAQL
mkrtffrlrgkelsLILIVLVCTTIFVWTWDRTPFLATFLPPKSRFLWLSSDAFTNSVSPESQIHMNKDISTSAENKTVNYQEGQLSNILAPAGPVAETIPAKRKENTEslaegqakdkhvveaeknssaenstiltktkengkknlgeknsklekesvdrrssadsanlssserikadenstMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRTLAFIGDSLGRQQFQSLMCMVTggkerpdvedvgkeyglvkprgairpngwayrFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL
MKRTFFRLRGKELSLILIVLVCTTIFVWTWDRTPFLATFLPPKSRFLWLSSDAFTNSVSPESQIHMNKDISTSAENKTVNYQEGQLSNILAPAGPVAETIPAKRKENTESLAEGQAKDKHVVEAEKNSSAENSTIltktkengkknlgeknsklekesVdrrssadsanlsssERIKADENSTMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL
****FFRLRGKELSLILIVLVCTTIFVWTWDRTPFLATFLPPKSRFLWLSSDAF***************************************************************************************************************************************ACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCD***********************AVKGTGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFA**
***********ELSLILIVLVCTTIFVWTWDRTPFLATFLPPK**************************************************************************************************************************************************ACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLLDITALSQVRDEGH*SQ***TASRGVQDCLHWCLPGVPDTWNEILFAQL
MKRTFFRLRGKELSLILIVLVCTTIFVWTWDRTPFLATFLPPKSRFLWLSSDAFTNSVSPESQIHMNKDISTSAENKTVNYQEGQLSNILAPAGPVAETIPA*****************************NSTILTKTKENGKKNLGEKN***********************RIKADENSTMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL
****FFRLRGKELSLILIVLVCTTIFVWTWDRTPFLATFLPPKSR************************************************************************************************************************************************ACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKRTFFRLRGKELSLILIVLVCTTIFVWTWDRTPFLATFLPPKSRFLWLSSDAFTNSVSPESQIHMNKDISTSAENKTVNYQEGQLSNILAPAGPVAETIPAKRKENTESLAEGQAKDKHVVEAEKNSSAENSTILTKTKENGKKNLGEKNSKLEKESVDRRSSADSANLSSSERIKADENSTMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKGTGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query526
15810385551 unknown protein [Arabidopsis thaliana] 0.990 0.945 0.602 0.0
145334527533 protein trichome birefringence-like 16 [ 0.990 0.977 0.602 0.0
18420285551 protein trichome birefringence-like 16 [ 0.990 0.945 0.602 0.0
255550409490 conserved hypothetical protein [Ricinus 0.754 0.810 0.764 0.0
297808139555 hypothetical protein ARALYDRAFT_910111 [ 0.992 0.940 0.595 0.0
225444688519 PREDICTED: uncharacterized protein LOC10 0.973 0.986 0.637 0.0
356545780 680 PREDICTED: uncharacterized protein LOC10 0.988 0.764 0.585 0.0
357479407512 hypothetical protein MTR_4g125060 [Medic 0.942 0.968 0.595 1e-178
449446632558 PREDICTED: uncharacterized protein LOC10 0.992 0.935 0.572 1e-178
224068484392 predicted protein [Populus trichocarpa] 0.640 0.859 0.829 1e-176
>gi|15810385|gb|AAL07080.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/538 (60%), Positives = 389/538 (72%), Gaps = 17/538 (3%)

Query: 1   MKRTFFRLRGKELSLILIVLVCTTIFVWTWDRTPFLATFLPPKSRFLWLSSDAFTNSVSP 60
           MKR   R R +++S++L+VLVC T+ +WTWDRTP  A FLPP+S +L L S+     + P
Sbjct: 19  MKRGALRRRARDISVMLVVLVCATVVIWTWDRTPTSA-FLPPESHYLKLQSEEKVEKL-P 76

Query: 61  ESQIHMNKDISTSA---ENKTVNYQEGQLSNILAPAGPVAETIPAKRKENTESLA--EGQ 115
            +     KD  +SA    NK  + ++   +                   N   +   E +
Sbjct: 77  TALNTETKDSYSSAIPFVNKEESKEDSSDNKDTEEEEEKQVEEVTVSNSNRGKIPTIEEK 136

Query: 116 AKDKHVVEAE---KNSSAENSTILTKTKENGKKNLGEKNSKLEKESVDRRSSADSANLSS 172
             +  V+ +E   + +       L K K       GE     E   +   +S   +N+ +
Sbjct: 137 KGEHEVIASEPKYRKTPTREDFKLEKVKHEVAVGEGEAT---ETTHIKETNSDPKSNILA 193

Query: 173 SERIKADENSTMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAY 232
           ++  + D  ST    NQACNYAKGKWVVD+ RPLYSG+ CKQWL+ MWACRLMQRTDFA+
Sbjct: 194 TDEERTDGTSTARITNQACNYAKGKWVVDNHRPLYSGSQCKQWLASMWACRLMQRTDFAF 253

Query: 233 ERLRWQPKDCQMEEFEGSQFLTR----TLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDV 288
           E LRWQPKDC MEEFEGS+FL R    TLAF+GDSLGRQQFQS+MCM++GGKER DV DV
Sbjct: 254 ESLRWQPKDCSMEEFEGSKFLRRMKNKTLAFVGDSLGRQQFQSMMCMISGGKERLDVLDV 313

Query: 289 GKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPP 348
           G E+G + P G  RP GWAYRFP TNTT+LY+WS+ LCD++PLNIT+PATE+AMHLDRPP
Sbjct: 314 GPEFGFITPEGGARPGGWAYRFPETNTTVLYHWSSTLCDIEPLNITDPATEHAMHLDRPP 373

Query: 349 AFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIV 408
           AFLRQYL K DVLV+NTGHHWNRGKL  N+WVMHV G+PNTNRK+A +  AKNFTIHS V
Sbjct: 374 AFLRQYLQKIDVLVMNTGHHWNRGKLNGNKWVMHVNGVPNTNRKLAALGNAKNFTIHSTV 433

Query: 409 SWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGS 468
           SWVNSQLP HP LKAFYRS+SPRHFV G+WNTGGSC+NTTPMSIGKEVLQ+ES DYSAG 
Sbjct: 434 SWVNSQLPLHPGLKAFYRSLSPRHFVGGEWNTGGSCNNTTPMSIGKEVLQEESSDYSAGR 493

Query: 469 AVKGTGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL 526
           AVKGTGVKLLDITALS +RDEGHIS++SI+ASRGVQDCLHWCLPGVPDTWNEILFA +
Sbjct: 494 AVKGTGVKLLDITALSHIRDEGHISRFSISASRGVQDCLHWCLPGVPDTWNEILFAMI 551




Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145334527|ref|NP_001078609.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|332005493|gb|AED92876.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18420285|ref|NP_568398.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|238481331|ref|NP_001154728.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|332005492|gb|AED92875.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|332005494|gb|AED92877.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255550409|ref|XP_002516255.1| conserved hypothetical protein [Ricinus communis] gi|223544741|gb|EEF46257.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297808139|ref|XP_002871953.1| hypothetical protein ARALYDRAFT_910111 [Arabidopsis lyrata subsp. lyrata] gi|297317790|gb|EFH48212.1| hypothetical protein ARALYDRAFT_910111 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225444688|ref|XP_002277730.1| PREDICTED: uncharacterized protein LOC100247308 [Vitis vinifera] gi|297738542|emb|CBI27787.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356545780|ref|XP_003541313.1| PREDICTED: uncharacterized protein LOC100788136 [Glycine max] Back     alignment and taxonomy information
>gi|357479407|ref|XP_003609989.1| hypothetical protein MTR_4g125060 [Medicago truncatula] gi|355511044|gb|AES92186.1| hypothetical protein MTR_4g125060 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449446632|ref|XP_004141075.1| PREDICTED: uncharacterized protein LOC101210180 [Cucumis sativus] gi|449488111|ref|XP_004157942.1| PREDICTED: uncharacterized protein LOC101228691 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224068484|ref|XP_002326131.1| predicted protein [Populus trichocarpa] gi|222833324|gb|EEE71801.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query526
TAIR|locus:2180399551 TBL16 "AT5G20680" [Arabidopsis 0.665 0.635 0.782 6.6e-175
TAIR|locus:2160796408 TBL14 "AT5G64020" [Arabidopsis 0.667 0.860 0.602 3e-129
TAIR|locus:2040696482 TBL15 "AT2G37720" [Arabidopsis 0.623 0.680 0.576 2.4e-110
TAIR|locus:2080389469 TBL10 "TRICHOME BIREFRINGENCE- 0.621 0.697 0.324 1.8e-48
TAIR|locus:2080767427 TBL8 "AT3G11570" [Arabidopsis 0.621 0.765 0.328 7.3e-43
TAIR|locus:2182157464 TBL11 "TRICHOME BIREFRINGENCE- 0.621 0.704 0.301 8.7e-40
TAIR|locus:2096094475 TBL6 "AT3G62390" [Arabidopsis 0.617 0.684 0.303 8.7e-40
TAIR|locus:2088659556 TBL1 "AT3G12060" [Arabidopsis 0.631 0.597 0.312 4.8e-39
TAIR|locus:2149947485 TBL5 "AT5G20590" [Arabidopsis 0.629 0.682 0.293 8.3e-39
TAIR|locus:2035342456 TBL25 "AT1G01430" [Arabidopsis 0.558 0.644 0.303 9.7e-39
TAIR|locus:2180399 TBL16 "AT5G20680" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1564 (555.6 bits), Expect = 6.6e-175, Sum P(2) = 6.6e-175
 Identities = 277/354 (78%), Positives = 310/354 (87%)

Query:   177 KADENSTMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLR 236
             + D  ST    NQACNYAKGKWVVD+ RPLYSG+ CKQWL+ MWACRLMQRTDFA+E LR
Sbjct:   198 RTDGTSTARITNQACNYAKGKWVVDNHRPLYSGSQCKQWLASMWACRLMQRTDFAFESLR 257

Query:   237 WQPKDCQMEEFEGSQFLTR----TLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEY 292
             WQPKDC MEEFEGS+FL R    TLAF+GDSLGRQQFQS+MCM++GGKER DV DVG E+
Sbjct:   258 WQPKDCSMEEFEGSKFLRRMKNKTLAFVGDSLGRQQFQSMMCMISGGKERLDVLDVGPEF 317

Query:   293 GLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLR 352
             G + P G  RP GWAYRFP TNTT+LY+WS+ LCD++PLNIT+PATE+AMHLDRPPAFLR
Sbjct:   318 GFITPEGGARPGGWAYRFPETNTTVLYHWSSTLCDIEPLNITDPATEHAMHLDRPPAFLR 377

Query:   353 QYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVN 412
             QYL K DVLV+NTGHHWNRGKL  N+WVMHV G+PNTNRK+A +  AKNFTIHS VSWVN
Sbjct:   378 QYLQKIDVLVMNTGHHWNRGKLNGNKWVMHVNGVPNTNRKLAALGNAKNFTIHSTVSWVN 437

Query:   413 SQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKG 472
             SQLP HP LKAFYRS+SPRHFV G+WNTGGSC+NTTPMSIGKEVLQ+ES DYSAG AVKG
Sbjct:   438 SQLPLHPGLKAFYRSLSPRHFVGGEWNTGGSCNNTTPMSIGKEVLQEESSDYSAGRAVKG 497

Query:   473 TGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL 526
             TGVKLLDITALS +RDEGHIS++SI+ASRGVQDCLHWCLPGVPDTWNEILFA +
Sbjct:   498 TGVKLLDITALSHIRDEGHISRFSISASRGVQDCLHWCLPGVPDTWNEILFAMI 551


GO:0008150 "biological_process" evidence=ND
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2160796 TBL14 "AT5G64020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040696 TBL15 "AT2G37720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080389 TBL10 "TRICHOME BIREFRINGENCE-LIKE 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080767 TBL8 "AT3G11570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query526
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 3e-68
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 2e-45
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 3e-20
>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
 Score =  220 bits (562), Expect = 3e-68
 Identities = 97/289 (33%), Positives = 135/289 (46%), Gaps = 31/289 (10%)

Query: 247 FEGSQFLT----RTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIR 302
           F+  QFL     + + F+GDSL R Q++SL+C+++  +  P  + + ++  L        
Sbjct: 4   FDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEP-PKGKTLERDGRL-------- 54

Query: 303 PNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLV 362
              + +RF   N TI +YWS  L + D         +  + LD       +     DVLV
Sbjct: 55  ---FRFRFKDYNVTIEFYWSPFLVESD----NAEEGKRVLKLDSIDEKWSKLWPGADVLV 107

Query: 363 LNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLK 422
            N+GH W   K+    W          N K      A    + +   WV+  LP   + +
Sbjct: 108 FNSGHWWLHRKVY-IGWDYCQKS----NYKEMGFLDAYRKALETWAKWVDVNLPPS-KTR 161

Query: 423 AFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVK----GTGVKLL 478
            F+R+ SP HF  G+WNTGGSC  T P+   +               +      T VKLL
Sbjct: 162 VFFRTFSPVHFEGGEWNTGGSCYETEPLLGSEYKGLTPEMIDIVNEVLSRAAMKTPVKLL 221

Query: 479 DITALSQVRDEGHISQYSITAS-RGVQDCLHWCLPGVPDTWNEILFAQL 526
           DIT LSQ R +GH S Y      +  QDCLHWCLPGVPDTWNE+L A L
Sbjct: 222 DITLLSQYRKDGHPSVYRKPGPPKKEQDCLHWCLPGVPDTWNELLLALL 270


The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270

>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 526
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.93
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 97.53
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=6e-109  Score=861.95  Aligned_cols=321  Identities=31%  Similarity=0.637  Sum_probs=262.1

Q ss_pred             ccccCCCCCcCccCceeeCCCCCCcCCCCCchhhhccccccccCCCCcccceeeeecCCCCCCccCHHHHhhc----ceE
Q 009777          183 TMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTR----TLA  258 (526)
Q Consensus       183 ~~~~~~~~CD~f~G~WV~D~s~PlY~~~tCp~fI~~~~nC~knGRPD~~Yl~WRWqP~~CdLPrFDa~~FLe~----rLa  258 (526)
                      .+..+.+.||+|+|+||+|+++|||++++||.||+++|||++|||||++|++|||||++|+||||||.+||++    |||
T Consensus        45 ~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~  124 (387)
T PLN02629         45 SLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVM  124 (387)
T ss_pred             CCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEE
Confidence            3556688999999999999999999999998679999999999999999999999999999999999999997    999


Q ss_pred             EEeechhhhHHHHHHHhhcCCCCCCCccccccccceeccCCCcCCCcceEEecccceEEEEEecccccccCCCCCCCCCC
Q 009777          259 FIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPAT  338 (526)
Q Consensus       259 FVGDSL~RNQweSLlCLLs~a~~p~~v~~~~~~y~~~~~~g~~~~~~~~~~F~~yN~TV~fyWSPFLV~~~~~~~~~~~~  338 (526)
                      ||||||+|||||||+|||+++++.....        +...+.+    .+|+|++||+||+||||||||+.++.+     .
T Consensus       125 FVGDSL~RNQ~eSLvClL~~~~p~~~~~--------~~~~~~~----~~~~F~~yN~TV~~ywspfLV~~~~~~-----~  187 (387)
T PLN02629        125 FVGDSLGRNQWESLICLISSSVPSTRTQ--------MSRGDPL----STFKFLDYGVSISFYKAPYLVDIDAVQ-----G  187 (387)
T ss_pred             EeccccchhHHHHHHHHhhccCCCCcee--------eecCCce----EEEEeccCCEEEEEEecceEEeeecCC-----C
Confidence            9999999999999999999987643210        1112222    379999999999999999999975432     2


Q ss_pred             ccceeeCCCchhhhcccCcccEEEEcCccccCCCccccCeeeEE-eCCccCCCcchhhhhhHHHHHHHHHHHHHHhhCCC
Q 009777          339 EYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMH-VGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPE  417 (526)
Q Consensus       339 ~~~L~LD~~d~~wa~~~~~~DVLVfNTGhWW~r~~~~~~~~~~~-~gg~~~~~~~~~~~~~Ay~~al~Twa~wV~~~ld~  417 (526)
                      ...|+||+++.. ++.|+++|||||||||||.+++.. .+|.++ .|+...   ..+++..||++||+||++||++++++
T Consensus       188 ~~~l~LD~id~~-a~~w~~~DvlVfntghWw~~~~~~-~~~~~~~~g~~~~---~~~~~~~A~r~al~T~~~wv~~~~~~  262 (387)
T PLN02629        188 KRVLKLEEISGN-ANAWRDADVLIFNTGHWWSHQGSL-QGWDYIESGGTYY---QDMDRLVALEKALRTWAYWVDTNVDR  262 (387)
T ss_pred             ceeEEecCcchh-hhhhccCCEEEEeCccccCCCCee-EEeeeeccCCccc---cCccHHHHHHHHHHHHHHHHHhcCCC
Confidence            457999999875 778999999999999999987643 244444 333322   22456689999999999999999987


Q ss_pred             CCCceEEEEecCCCcccCCCCCCCC-----CCC-ccccCCCCccccccCcchhhhhhcc--cCCceEEeecccccccccC
Q 009777          418 HPRLKAFYRSISPRHFVNGDWNTGG-----SCD-NTTPMSIGKEVLQDESGDYSAGSAV--KGTGVKLLDITALSQVRDE  489 (526)
Q Consensus       418 ~~~t~VFfRT~SP~HFegGeWn~GG-----~C~-~T~Pi~~~e~~~~~~~~~~~~~~a~--~~~~v~LLDIT~LS~lR~D  489 (526)
                       .+++|||||+||+||+||+||+||     +|+ +|+|+..+++.........++++++  .+.+|+|||||+||+||||
T Consensus       263 -~kt~vffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~D  341 (387)
T PLN02629        263 -SRTRVFFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKD  341 (387)
T ss_pred             -CCcEEEEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCC
Confidence             578899999999999999999875     586 5899875443211111122344443  3478999999999999999


Q ss_pred             CCCcccccCC-------CCCCCCceeccCCCcchHHHHHHHHhC
Q 009777          490 GHISQYSITA-------SRGVQDCLHWCLPGVPDTWNEILFAQL  526 (526)
Q Consensus       490 GHPs~Y~~~~-------~~~~~DClHWCLPGvpDTWNELLya~L  526 (526)
                      ||||+|+...       +..++||+||||||||||||||||++|
T Consensus       342 gHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L  385 (387)
T PLN02629        342 GHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTAL  385 (387)
T ss_pred             CCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHH
Confidence            9999997431       235689999999999999999999986



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00