Citrus Sinensis ID: 009895

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520---
MGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKFAALSNC
ccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccc
cccccHHcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcHHHcccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccHcccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccEEEEcHHHcccccccccEEEEEEcccHHHHHcHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccHccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHccHHHHcccccEEEEHHHHHHHHHHHHccccccc
mgssreiaiGPVAVVSMLLSALMQnvqdpaadpvaYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGllgishftnkTDVVSVLGSVFSSlhhsywyplnfvLGCSFLIFLLIARFIGrrnkklfwlpaIAPLLSVILSTLIVYLTKADKHGVKIVKHikgglnpssahqlqltgphlgqtaKIGLISAVVALTEAIAVGRsfasikgyhldgnKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSalpglidineainiykvdkLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRpgielqgrlprtdtygdisqfpmaiktpgiLTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDmsnsmnidtSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKFAALSNC
mgssreiaigPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKFAALSNC
MGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIglqqlkgllgISHFTNKTDvvsvlgsvfsslhhsYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVllslelftsllyytPiailasiilsalPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKFAALSNC
******IAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKFA*****
MGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSK*******
MGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKFAALSNC
****REIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKF******
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKFAALSNC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query523 2.2.26 [Sep-21-2011]
P53393644 Low affinity sulfate tran N/A no 0.990 0.804 0.744 0.0
P92946677 Sulfate transporter 2.2 O yes no 0.998 0.771 0.692 0.0
O04722677 Sulfate transporter 2.1 O no no 0.982 0.759 0.689 0.0
Q9FEP7656 Sulfate transporter 1.3 O no no 0.975 0.777 0.582 1e-165
Q9SAY1649 Sulfate transporter 1.1 O no no 0.980 0.790 0.576 1e-165
P53391667 High affinity sulfate tra N/A no 0.967 0.758 0.565 1e-162
P53392662 High affinity sulfate tra N/A no 0.967 0.764 0.561 1e-161
Q9MAX3653 Sulfate transporter 1.2 O no no 0.975 0.781 0.582 1e-160
Q9SV13658 Sulfate transporter 3.1 O no no 0.973 0.773 0.500 1e-152
Q9LW86653 Probable sulfate transpor no no 0.984 0.788 0.472 1e-138
>sp|P53393|SUT3_STYHA Low affinity sulfate transporter 3 OS=Stylosanthes hamata GN=ST3 PE=2 SV=1 Back     alignment and function desciption
 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/524 (74%), Positives = 453/524 (86%), Gaps = 6/524 (1%)

Query: 1   MGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLG 60
           MGSSREIAIGPVAVVSMLLS+L+  V DP A P  YR LVFTVT FAG+FQ+ FG+ RLG
Sbjct: 118 MGSSREIAIGPVAVVSMLLSSLVPKVIDPDAHPNDYRNLVFTVTLFAGIFQTAFGVLRLG 177

Query: 61  FLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSY--- 117
           FLVDFLSHAA+VGFMAGAAIVIGLQQLKGLLG++HFT KTD V+VL SV++SLH      
Sbjct: 178 FLVDFLSHAALVGFMAGAAIVIGLQQLKGLLGLTHFTTKTDAVAVLKSVYTSLHQQITSS 237

Query: 118 --WYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGV 175
             W PLNFV+GCSFLIFLL ARFIGRRNKK FWLPAIAPLLSVILSTLIV+L+K DKHGV
Sbjct: 238 ENWSPLNFVIGCSFLIFLLAARFIGRRNKKFFWLPAIAPLLSVILSTLIVFLSKGDKHGV 297

Query: 176 KIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDG 235
            I+KH++GGLNPSS H+LQL GPH+GQ AKIGLISA++ALTEAIAVGRSFA+IKGYHLDG
Sbjct: 298 NIIKHVQGGLNPSSVHKLQLNGPHVGQAAKIGLISAIIALTEAIAVGRSFANIKGYHLDG 357

Query: 236 NKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSL 295
           NKEM+AMG MNI GSLTSCYV+TGSFSRTAVNFSAGC+T VSNIVMA+TVLL LELFT L
Sbjct: 358 NKEMLAMGCMNIAGSLTSCYVSTGSFSRTAVNFSAGCKTAVSNIVMAVTVLLCLELFTRL 417

Query: 296 LYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAV 355
           LYYTP+AILASIILSALPGLIDI EA +I+KVDK DFLAC+GAF GVLF S+EIGLL A+
Sbjct: 418 LYYTPMAILASIILSALPGLIDIGEAYHIWKVDKFDFLACLGAFFGVLFVSIEIGLLIAL 477

Query: 356 TISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANF 415
           +ISFAKILL A+RPG+E+ GR+P T+ Y D++Q+PMA+ TPGIL IRI+S   CFANA F
Sbjct: 478 SISFAKILLQAIRPGVEVLGRIPTTEAYCDVAQYPMAVTTPGILVIRISSGSLCFANAGF 537

Query: 416 IRERIMRWV-TEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIEL 474
           +RERI++WV  EEQD +EE  K  +QA+IIDM++  N+DTSGIL LEELHKKL S G+EL
Sbjct: 538 VRERILKWVEDEEQDNIEEAAKGRVQAIIIDMTDLTNVDTSGILALEELHKKLLSRGVEL 597

Query: 475 VMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKFA 518
            M +PRW+VIHKLK A  +D+IGK  V+L+VAEA++ACL+S+FA
Sbjct: 598 AMVNPRWEVIHKLKVANFVDKIGKERVFLTVAEAVDACLSSRFA 641
Low-affinity H(+)/sulfate cotransporter which may be involved in the internal transport of sulfate between cellular or subcellular compartments within the plant.
Stylosanthes hamata (taxid: 37660)
>sp|P92946|SUT22_ARATH Sulfate transporter 2.2 OS=Arabidopsis thaliana GN=SULTR2;2 PE=1 SV=3 Back     alignment and function description
>sp|O04722|SUT21_ARATH Sulfate transporter 2.1 OS=Arabidopsis thaliana GN=SULTR2;1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAY1|SUT11_ARATH Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2 Back     alignment and function description
>sp|P53391|SUT1_STYHA High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1 Back     alignment and function description
>sp|P53392|SUT2_STYHA High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAX3|SUT12_ARATH Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1 Back     alignment and function description
>sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
255545632 658 sulfate transporter, putative [Ricinus c 0.992 0.788 0.804 0.0
224066913 635 sulfate/bicarbonate/oxalate exchanger an 0.998 0.822 0.791 0.0
81176641622 putative sulfate transporter, partial [P 0.998 0.839 0.783 0.0
81176643622 putative sulfate transporter, partial [P 0.998 0.839 0.783 0.0
356515820 653 PREDICTED: low affinity sulfate transpor 0.982 0.787 0.764 0.0
302141918 664 unnamed protein product [Vitis vinifera] 0.996 0.784 0.774 0.0
225459370 654 PREDICTED: low affinity sulfate transpor 0.996 0.796 0.774 0.0
356551646 654 PREDICTED: low affinity sulfate transpor 0.990 0.792 0.757 0.0
356550801 654 PREDICTED: low affinity sulfate transpor 0.990 0.792 0.757 0.0
359480819 648 PREDICTED: sulfate transporter 2.1-like 0.977 0.788 0.748 0.0
>gi|255545632|ref|XP_002513876.1| sulfate transporter, putative [Ricinus communis] gi|223546962|gb|EEF48459.1| sulfate transporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/523 (80%), Positives = 470/523 (89%), Gaps = 4/523 (0%)

Query: 1   MGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLG 60
           MGSSREIAIGPVAVVSMLLS+++Q++QDP ADP AYRKLVFTVTFFAG FQ++FGLFRLG
Sbjct: 140 MGSSREIAIGPVAVVSMLLSSMIQDIQDPVADPAAYRKLVFTVTFFAGTFQAIFGLFRLG 199

Query: 61  FLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYP 120
           FLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFT KTDVVSVL SVF+S+ H  W P
Sbjct: 200 FLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTTKTDVVSVLHSVFTSIDHP-WSP 258

Query: 121 LNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKH 180
           LNFVLGCSFLIFLL ARFIGRRNKK FWLPAIAPL+SVILSTLIV+L KADKHGV IVKH
Sbjct: 259 LNFVLGCSFLIFLLFARFIGRRNKKFFWLPAIAPLISVILSTLIVFLAKADKHGVNIVKH 318

Query: 181 IKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMV 240
           IK GLNPSS H LQ  GPH+GQTAKIGLISA++ALTEAIAVGRSFASIKGYHLDGNKEMV
Sbjct: 319 IKEGLNPSSVHDLQFNGPHVGQTAKIGLISAIIALTEAIAVGRSFASIKGYHLDGNKEMV 378

Query: 241 AMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTP 300
           AMGFMNI GSLTSCYVATGSFSRTAVNFSAGC+TVVSNIVMAITVLLSLELFT LLYYTP
Sbjct: 379 AMGFMNIAGSLTSCYVATGSFSRTAVNFSAGCETVVSNIVMAITVLLSLELFTRLLYYTP 438

Query: 301 IAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFA 360
           IAILASIILSALPGLI+I+E  +I+KVDKLDF+ACIGAF GVLFASVEIGLL AVTISF 
Sbjct: 439 IAILASIILSALPGLINIHEICHIWKVDKLDFIACIGAFFGVLFASVEIGLLVAVTISFL 498

Query: 361 KILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERI 420
           KILLN++RPGIE  GR+PRTDTY DI+Q+PMAIKT GILT+RINSAL CFANANFIRERI
Sbjct: 499 KILLNSIRPGIEELGRIPRTDTYSDINQYPMAIKTSGILTVRINSALLCFANANFIRERI 558

Query: 421 MRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPR 480
           M WVTE+ D+ E+ T   IQAVI+D+S   NIDT+GI+ LEELHKKL ++  ELV+A+PR
Sbjct: 559 MSWVTEKDDKTEDNTNGRIQAVILDLSTVTNIDTAGIIALEELHKKLLTHETELVLANPR 618

Query: 481 WQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKFAALSNC 523
           WQV+HKL+ AK LDRIG+  ++L+V EA++A +T+K   L++C
Sbjct: 619 WQVMHKLRVAKFLDRIGREKIFLTVGEAVDATVTTK---LNSC 658

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224066913|ref|XP_002302276.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222844002|gb|EEE81549.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|81176641|gb|ABB59581.1| putative sulfate transporter, partial [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|81176643|gb|ABB59582.1| putative sulfate transporter, partial [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|356515820|ref|XP_003526596.1| PREDICTED: low affinity sulfate transporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|302141918|emb|CBI19121.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225459370|ref|XP_002284234.1| PREDICTED: low affinity sulfate transporter 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356551646|ref|XP_003544185.1| PREDICTED: low affinity sulfate transporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|356550801|ref|XP_003543772.1| PREDICTED: low affinity sulfate transporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|359480819|ref|XP_002277065.2| PREDICTED: sulfate transporter 2.1-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
TAIR|locus:2184158677 SULTR2;1 "sulfate transporter 0.982 0.759 0.621 2.6e-169
TAIR|locus:2029496677 AST56 [Arabidopsis thaliana (t 0.998 0.771 0.619 4.5e-169
TAIR|locus:2030606656 SULTR1;3 "sulfate transporter 0.975 0.777 0.523 2.2e-137
TAIR|locus:2029396653 SULTR1;2 "sulfate transporter 0.975 0.781 0.523 2.2e-137
TAIR|locus:2138561649 SULTR1;1 "sulphate transporter 0.978 0.788 0.519 6.9e-134
TAIR|locus:3437527658 SULTR3;1 "AT3G51895" [Arabidop 0.973 0.773 0.452 7.4e-121
TAIR|locus:2132333646 SULTR3;2 "sulfate transporter 0.973 0.787 0.425 1.1e-112
TAIR|locus:2093452653 SULTR3;4 "sulfate transporter 0.984 0.788 0.416 7.8e-110
TAIR|locus:2201220631 AST91 "sulfate transporter 91" 0.990 0.820 0.420 2.6e-109
TAIR|locus:2183139634 SULTR3;5 "sulfate transporter 0.954 0.787 0.369 6.1e-94
TAIR|locus:2184158 SULTR2;1 "sulfate transporter 2;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1630 (578.8 bits), Expect = 2.6e-169, Sum P(2) = 2.6e-169
 Identities = 322/518 (62%), Positives = 386/518 (74%)

Query:     1 MGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLG 60
             MG+SREIAIGPVAVVS+L+S+++Q + DP  DP+ Y+KLV T TFFAG+FQ+ FGLFRLG
Sbjct:   161 MGTSREIAIGPVAVVSLLISSMLQKLIDPETDPLGYKKLVLTTTFFAGIFQASFGLFRLG 220

Query:    61 FLVDFLSHAAIVGFMAGAAIVIXXXXXXXXXXISHFTNKTDXXXXXXXXXXXXXXXYWYP 120
             FLVDFLSHAAIVGFM GAAIVI          I++FT  TD                W P
Sbjct:   221 FLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGITNFTTNTDIVSVLRAVWRSCQQQ-WSP 279

Query:   121 LNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKH 180
               F+LGCSFL F+LI RFIG++ KKLFWLPAIAPL++V++STL+V+LTKAD+HGVK V+H
Sbjct:   280 HTFILGCSFLSFILITRFIGKKYKKLFWLPAIAPLIAVVVSTLMVFLTKADEHGVKTVRH 339

Query:   181 IKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMV 240
             IKGGLNP S   L    PHLGQ AKIGLI A+VALTEAIAVGRSFA IKGY LDGNKEMV
Sbjct:   340 IKGGLNPMSIQDLDFNTPHLGQIAKIGLIIAIVALTEAIAVGRSFAGIKGYRLDGNKEMV 399

Query:   241 AMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVXXXXXXXXXXXXXXP 300
             A+GFMN++GS TSCY ATGSFSRTAVNF+AGC+T +SNIVMA+TV              P
Sbjct:   400 AIGFMNVLGSFTSCYAATGSFSRTAVNFAAGCETAMSNIVMAVTVFVALECLTRLLYYTP 459

Query:   301 XXXXXXXXXXXXPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFA 360
                         PGLI+INEAI+I+KVDK DFLA IGAF GVLFASVEIGLL AV ISFA
Sbjct:   460 IAILASIILSALPGLININEAIHIWKVDKFDFLALIGAFFGVLFASVEIGLLVAVVISFA 519

Query:   361 KILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERI 420
             KI+L ++RPGIE  GR+P TDT+ D +Q+PM +KTPG+L  R+ SAL CFANA+ I ERI
Sbjct:   520 KIILISIRPGIETLGRMPGTDTFTDTNQYPMTVKTPGVLIFRVKSALLCFANASSIEERI 579

Query:   421 MRWVTEEQDE--LEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMAS 478
             M WV EE++E   +   KR I  V++DMS+ +N+DTSGI  L ELH KL   G+ELV+ +
Sbjct:   580 MGWVDEEEEEENTKSNAKRKILFVVLDMSSLINVDTSGITALLELHNKLIKTGVELVIVN 639

Query:   479 PRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSK 516
             P+WQVIHKL  AK +DRIG G VYL++ EA++AC   K
Sbjct:   640 PKWQVIHKLNQAKFVDRIG-GKVYLTIGEALDACFGLK 676
GO:0005215 "transporter activity" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0008271 "secondary active sulfate transmembrane transporter activity" evidence=IEA
GO:0008272 "sulfate transport" evidence=IEA;IGI
GO:0015116 "sulfate transmembrane transporter activity" evidence=IGI;ISS
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
TAIR|locus:2029496 AST56 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030606 SULTR1;3 "sulfate transporter 1;3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029396 SULTR1;2 "sulfate transporter 1;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138561 SULTR1;1 "sulphate transporter 1;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:3437527 SULTR3;1 "AT3G51895" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132333 SULTR3;2 "sulfate transporter 3;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093452 SULTR3;4 "sulfate transporter 3;4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201220 AST91 "sulfate transporter 91" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183139 SULTR3;5 "sulfate transporter 3;5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P92946SUT22_ARATHNo assigned EC number0.69200.99800.7710yesno
P53393SUT3_STYHANo assigned EC number0.74420.99040.8043N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_II0422
sulfate/bicarbonate/oxalate exchanger and transporter sat-1 (635 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
TIGR00815563 TIGR00815, sulP, high affinity sulphate transporte 0.0
pfam00916279 pfam00916, Sulfate_transp, Sulfate transporter fam 1e-109
COG0659554 COG0659, SUL1, Sulfate permease and related transp 2e-76
cd07042107 cd07042, STAS_SulP_like_sulfate_transporter, Sulph 1e-22
pfam01740106 pfam01740, STAS, STAS domain 7e-22
PRK11660568 PRK11660, PRK11660, putative transporter; Provisio 5e-15
PRK11660568 PRK11660, PRK11660, putative transporter; Provisio 4e-06
cd0704399 cd07043, STAS_anti-anti-sigma_factors, Sulphate Tr 1e-04
>gnl|CDD|162054 TIGR00815, sulP, high affinity sulphate transporter 1 Back     alignment and domain information 
 Score =  543 bits (1402), Expect = 0.0
 Identities = 238/509 (46%), Positives = 325/509 (63%), Gaps = 6/509 (1%)

Query: 1   MGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLG 60
            G+SR+IAIGPVAV+S+LL +++  V           +L FT+T  AG+FQ + GL RLG
Sbjct: 60  FGTSRDIAIGPVAVMSLLLGSVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLG 119

Query: 61  FLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSY-WY 119
           FL++FLSHA I GFM GAAI IGL QLKGLLGIS F  +TD + V+ S ++ L +++ W 
Sbjct: 120 FLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTLGVVISTWAGLPNTHNWN 179

Query: 120 PLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVK 179
               V+G   L+FLL  + +G+RNKKL + PA+APLL VIL+TL V +    K GV I+ 
Sbjct: 180 WCTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSILG 239

Query: 180 HIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEM 239
           HI  GL  S    + L    L   A   +  A+V L E+IA+ RSFA + GY +D N+E+
Sbjct: 240 HIPSGL--SFFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQEL 297

Query: 240 VAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYT 299
           VA G  NIVGS  SCY ATGS SRTAVN  AGC+T +S +V AI VLL L + T L YY 
Sbjct: 298 VAQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYI 357

Query: 300 PIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISF 359
           P A LA+II+SA+ GLID  E   ++K DK+DF+  +  F GV+F S+EIGLL  V +S 
Sbjct: 358 PQAALAAIIISAVRGLIDYKELYKLWKADKMDFVVWLVTFFGVVFTSIEIGLLVGVALSA 417

Query: 360 AKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRER 419
           A +LL   RP   + GR+P T+ Y  I Q+P A   PGIL  R++  L  FANA  +++R
Sbjct: 418 AFLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPPPGILVYRVDGPL-YFANAEDLKDR 476

Query: 420 IMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASP 479
           +++ + +E     E  +  +Q VI+DMS   ++DTSGI  LEEL K+L + GI+L++A+P
Sbjct: 477 LLKRIEDETRRELE--RPPLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANP 534

Query: 480 RWQVIHKLKSAKLLDRIGKGCVYLSVAEA 508
              V   LK   L++ IG+   + SV++A
Sbjct: 535 NKAVRSTLKRGGLVELIGEEHFFPSVSDA 563

The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out) [Transport and binding proteins, Anions]. Length = 563
>gnl|CDD|216188 pfam00916, Sulfate_transp, Sulfate transporter family Back     alignment and domain information
>gnl|CDD|223732 COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|132913 cd07042, STAS_SulP_like_sulfate_transporter, Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>gnl|CDD|201948 pfam01740, STAS, STAS domain Back     alignment and domain information
>gnl|CDD|183265 PRK11660, PRK11660, putative transporter; Provisional Back     alignment and domain information
>gnl|CDD|183265 PRK11660, PRK11660, putative transporter; Provisional Back     alignment and domain information
>gnl|CDD|132914 cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 523
TIGR00815563 sulP high affinity sulphate transporter 1. (2) SO4 100.0
COG0659554 SUL1 Sulfate permease and related transporters (MF 100.0
PRK11660568 putative transporter; Provisional 100.0
KOG0236665 consensus Sulfate/bicarbonate/oxalate exchanger SA 100.0
PF00916280 Sulfate_transp: Sulfate transporter family; InterP 100.0
TIGR03173406 pbuX xanthine permease. All the seed members of th 99.96
PRK10720428 uracil transporter; Provisional 99.95
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 99.95
TIGR03616429 RutG pyrimidine utilization transport protein G. T 99.91
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 99.9
PRK11412433 putative uracil/xanthine transporter; Provisional 99.89
COG2252436 Xanthine/uracil/vitamin C permease [Nucleotide tra 99.86
PF00860389 Xan_ur_permease: Permease family; InterPro: IPR006 99.85
PF01740117 STAS: STAS domain; InterPro: IPR002645 The STAS (S 99.76
TIGR02886106 spore_II_AA anti-sigma F factor antagonist. The an 99.74
cd07041109 STAS_RsbR_RsbS_like Sulphate Transporter and Anti- 99.72
TIGR00843395 benE benzoate transporter. The benzoate transporte 99.69
cd06844100 STAS Sulphate Transporter and Anti-Sigma factor an 99.65
TIGR00377108 ant_ant_sig anti-anti-sigma factor. This superfami 99.54
PF03594378 BenE: Benzoate membrane transport protein; InterPr 99.53
cd07042107 STAS_SulP_like_sulfate_transporter Sulphate Transp 99.48
COG1366117 SpoIIAA Anti-anti-sigma regulatory factor (antagon 99.41
cd0704399 STAS_anti-anti-sigma_factors Sulphate Transporter 99.38
PF1346680 STAS_2: STAS domain 99.22
TIGR00834900 ae anion exchange protein. They preferentially cat 99.19
KOG1292510 consensus Xanthine/uracil transporters [Nucleotide 99.16
COG3135402 BenE Uncharacterized protein involved in benzoate 99.14
KOG1172876 consensus Na+-independent Cl/HCO3 exchanger AE1 an 99.12
PF00955510 HCO3_cotransp: HCO3- transporter family Only parti 98.21
COG311399 Predicted NTP binding protein (contains STAS domai 98.19
PF11840492 DUF3360: Protein of unknown function (DUF3360); In 97.0
PF11964109 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 Th 95.17
PRK10720428 uracil transporter; Provisional 94.02
TIGR00815 563 sulP high affinity sulphate transporter 1. (2) SO4 93.84
PF1421374 DUF4325: Domain of unknown function (DUF4325) 93.81
COG0659 554 SUL1 Sulfate permease and related transporters (MF 92.02
PF13344101 Hydrolase_6: Haloacid dehalogenase-like hydrolase; 91.42
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 91.14
KOG3040 262 consensus Predicted sugar phosphatase (HAD superfa 89.5
PRK11412433 putative uracil/xanthine transporter; Provisional 87.64
PF0934599 DUF1987: Domain of unknown function (DUF1987); Int 87.0
COG5439112 Uncharacterized conserved protein [Function unknow 85.86
PRK11660 568 putative transporter; Provisional 84.32
PF13788113 DUF4180: Domain of unknown function (DUF4180) 80.19
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information 
Probab=100.00  E-value=4.6e-83  Score=690.10  Aligned_cols=503  Identities=47%  Similarity=0.749  Sum_probs=461.0

Q ss_pred             CCCCCccccCchHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhHhHHHHHHHHHHH
Q 009895            1 MGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAI   80 (523)
Q Consensus         1 fGss~~~~~Gp~a~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~lg~~~lg~l~~~ip~~Vi~Gf~~gigl   80 (523)
                      |||||++++||++++|+++++.+.++..+...++++++.+..+++++|++|+++|++|+|++++|+|+||+.||++|+|+
T Consensus        60 fGss~~~i~Gp~a~~sl~~~~~v~~~~~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~  139 (563)
T TIGR00815        60 FGTSRDIAIGPVAVMSLLLGSVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAI  139 (563)
T ss_pred             ecCCCcccCCHHHHHHHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHH
Confidence            79999999999999999999999997643333357889999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccccCccccCCCcchHHHHHHHHhhcCcC-ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccchhhHHHH
Q 009895           81 VIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHS-YWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVI  159 (523)
Q Consensus        81 ~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lg~~~l~~l~~~~~~~~~~~~~~~~p~~~~li~vv  159 (523)
                      +++.+|++.++|.+..+...++++.+.+.+.++++. .||+.+++++++++++++..+++.+|++++.+.+.|.++++++
T Consensus       140 ~i~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~p~~li~vi  219 (563)
T TIGR00815       140 TIGLSQLKGLLGISIFNTRTDTLGVVISTWAGLPNTHNWNWCTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVI  219 (563)
T ss_pred             HHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHhhhhccchhcccccHHHHHHH
Confidence            999999999999975434456777777777777650 1399999999999999988898888888877777779999999


Q ss_pred             HHHHHHHHhhcCCCCeeEeeccCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCccCCchhH
Q 009895          160 LSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEM  239 (523)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~g~ip~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~el  239 (523)
                      ++++++++++.+++++..+|++|.++|.+.+|.++|  ..+...++.++.+++++++|++.+++++++++|+++|+|||+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~g~ip~g~p~~~~~~~~~--~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~~~d~n~El  297 (563)
T TIGR00815       220 LATLAVTIGLHKKQGVSILGHIPSGLSFFPPITLDW--ELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQEL  297 (563)
T ss_pred             HHHHHHHHHccCCCCeEEEeecCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHH
Confidence            999999998888889999999999998887776554  568889999999999999999999999999999999999999


Q ss_pred             HHHhHHHHHhhhcCCccCCCccchhhhhhhcCCCcchhHHHHHHHHHHHHHHHhhHhhhhhhHHHHHHHHHHhcccCCHH
Q 009895          240 VAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDIN  319 (523)
Q Consensus       240 ~a~G~aNivs~lfGg~p~~~~~s~s~~~~~~Ga~t~~s~i~~~~~~l~~~~~~~~ll~~iP~~vla~ili~~~~~l~~~~  319 (523)
                      +++|++|+++|+|||+|++++++||++|.++|+|||++++++++++++++++++|+++|+|++++|+++++++++|++|+
T Consensus       298 ~a~G~~N~~~~~fg~~p~~~s~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~~~~~l~~iP~~~la~ili~~~~~l~~~~  377 (563)
T TIGR00815       298 VAQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIPQAALAAIIISAVRGLIDYK  377 (563)
T ss_pred             HHhhHHHHHHHHhCccCCCCcchHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHhcccCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhcCchhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCcCeEEeeecCCCCcccCCCCCCCccCCCcEE
Q 009895          320 EAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGIL  399 (523)
Q Consensus       320 ~~~~~~~~~~~d~~v~~~t~~~~~~~~~~~gi~~Gi~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  399 (523)
                      +++++||.++.|+.++++|+++++++|++.|+++|++++++.+++|++||+...+++.++++.|++.+++++.++.+++.
T Consensus       378 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~Gi~vGv~~s~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~  457 (563)
T TIGR00815       378 ELYKLWKADKMDFVVWLVTFFGVVFTSIEIGLLVGVALSAAFLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPPPGIL  457 (563)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCceeEeeecCCCCcccchhhCcccCCCCCEE
Confidence            99999999999999999999999999999999999999999999999999999999999888899998888888889999


Q ss_pred             EEEECCCceeEechHHHHHHHHHHHHhhhhhhhhhccCCceEEEEEecCCCccChHHHHHHHHHHHHHHhCCCEEEEEcC
Q 009895          400 TIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASP  479 (523)
Q Consensus       400 ii~l~G~~L~f~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vIlD~s~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~  479 (523)
                      ++|++|+ |||+|+++|++++++.++++.++  +.++++.+++|+||++++++|+||+++|.++.++++++|++++++++
T Consensus       458 I~r~~g~-L~F~na~~~~~~l~~~~~~~~~~--~~~~~~~~~vIlD~~~V~~iDsSg~~~L~~l~~~l~~~g~~l~l~~~  534 (563)
T TIGR00815       458 VYRVDGP-LYFANAEDLKDRLLKRIEDETRR--ELERPPLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANP  534 (563)
T ss_pred             EEEcCCc-eEeCcHHHHHHHHHHHHhhhccc--cccCCCceEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence            9999999 99999999999998877642211  11223469999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHCCCccccCCcccccCHHHH
Q 009895          480 RWQVIHKLKSAKLLDRIGKGCVYLSVAEA  508 (523)
Q Consensus       480 ~~~v~~~l~~~gl~~~~~~~~if~s~~~A  508 (523)
                      ++++++.|+++|+.+.++++++|+|.|||
T Consensus       535 ~~~v~~~l~~~gl~~~~~~~~~f~s~~~A  563 (563)
T TIGR00815       535 NKAVRSTLKRGGLVELIGEEHFFPSVSDA  563 (563)
T ss_pred             ChHHHHHHHHCCchhhcCCcceeCChhhC
Confidence            99999999999999999999999999986

(2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>TIGR03616 RutG pyrimidine utilization transport protein G Back     alignment and domain information
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] Back     alignment and domain information
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] Back     alignment and domain information
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists Back     alignment and domain information
>TIGR02886 spore_II_AA anti-sigma F factor antagonist Back     alignment and domain information
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation Back     alignment and domain information
>TIGR00843 benE benzoate transporter Back     alignment and domain information
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors Back     alignment and domain information
>TIGR00377 ant_ant_sig anti-anti-sigma factor Back     alignment and domain information
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] Back     alignment and domain information
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>PF13466 STAS_2: STAS domain Back     alignment and domain information
>TIGR00834 ae anion exchange protein Back     alignment and domain information
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] Back     alignment and domain information
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells Back     alignment and domain information
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only] Back     alignment and domain information
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF11964 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 This family of proteins is functionally uncharacterised Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>PF14213 DUF4325: Domain of unknown function (DUF4325) Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A Back     alignment and domain information
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>PF09345 DUF1987: Domain of unknown function (DUF1987); InterPro: IPR018530 This family of proteins are functionally uncharacterised Back     alignment and domain information
>COG5439 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>PF13788 DUF4180: Domain of unknown function (DUF4180) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
2kln_A130 Solution Structure Of Stas Domain Of Rv1739c From M 1e-10
3llo_A143 Crystal Structure Of The Stas Domain Of Motor Prote 3e-06
>pdb|2KLN|A Chain A, Solution Structure Of Stas Domain Of Rv1739c From M. Tuberculosis Length = 130 Back     alignment and structure 
Iteration: 1

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 385 DISQFPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVII 444
           DI  +P A + PG++  R ++ L CFANA   R R +  V ++  ++E          ++
Sbjct: 3   DIDDYPQAKRVPGLVVYRYDAPL-CFANAEDFRRRALTVVDQDPGQVE--------WFVL 53
Query: 445 DMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLS 504
           +  +++ +D + +  L++L  +L   GI   MA  +  +   L++A LLD+IG+  ++++
Sbjct: 54  NAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDKIGEDHIFMT 113
Query: 505 VAEAMEA 511
           +  A++A
Sbjct: 114 LPTAVQA 120
>pdb|3LLO|A Chain A, Crystal Structure Of The Stas Domain Of Motor Protein Prestin (Anion Transporter Slc26a5) Length = 143 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
2kln_A130 Probable sulphate-transport transmembrane protein; 2e-39
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 4e-39
4dgh_A130 Sulfate permease family protein; STAS domain, anio 9e-30
4dgf_A135 Sulfate transporter sulfate transporter family PR; 7e-28
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 2e-20
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
3oiz_A99 Antisigma-factor antagonist, STAS; PSI-2, midwest 7e-05
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 1e-04
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 1e-04
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 2e-04
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Length = 130 Back     alignment and structure
 Score =  138 bits (350), Expect = 2e-39
 Identities = 32/131 (24%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 385 DISQFPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVII 444
           DI  +P A + PG++  R ++ L  FANA   R R +  V ++  +        ++  ++
Sbjct: 3   DIDDYPQAKRVPGLVVYRYDAPLC-FANAEDFRRRALTVVDQDPGQ--------VEWFVL 53

Query: 445 DMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLS 504
           +  +++ +D + +  L++L  +L   GI   MA  +  +   L++A LLD+IG+  ++++
Sbjct: 54  NAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDKIGEDHIFMT 113

Query: 505 VAEAMEACLTS 515
           +  A++A    
Sbjct: 114 LPTAVQAFRRR 124
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Length = 143 Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Length = 130 Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Length = 135 Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Length = 118 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A Length = 99 Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Length = 125 Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Length = 116 Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Length = 117 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 99.96
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 99.92
4dgh_A130 Sulfate permease family protein; STAS domain, anio 99.86
2kln_A130 Probable sulphate-transport transmembrane protein; 99.86
4dgf_A135 Sulfate transporter sulfate transporter family PR; 99.85
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 99.78
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 99.72
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 99.7
4hyl_A117 Stage II sporulation protein; structural genomics, 99.69
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 99.68
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 99.67
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 99.65
3zxn_A123 RSBS, anti-sigma-factor antagonist (STAS) domain p 99.56
3oiz_A99 Antisigma-factor antagonist, STAS; PSI-2, midwest 99.56
3agd_A456 Salt-tolerant glutaminase; glutaminase super famil 96.28
3bl4_A124 Uncharacterized protein; structural genomics, join 95.2
2q3l_A126 Uncharacterized protein; SPOIIAA-like fold, struct 92.02
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 80.19
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure
Probab=99.96  E-value=1.8e-28  Score=253.93  Aligned_cols=273  Identities=13%  Similarity=0.084  Sum_probs=211.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHh--hhh--hHHhhhhHhHHHHHHHHHHHHHHHhhhccccCccccCCCcchHHHHHHHHhh
Q 009895           37 RKLVFTVTFFAGVFQSVFGLF--RLG--FLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSS  112 (523)
Q Consensus        37 ~~~~~~~~~l~G~~~~~lg~~--~lg--~l~~~ip~~Vi~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~~~  112 (523)
                      ++.+.++.+++|+++++++.+  |+|  ++.|++|+.|++.+++.+|+.++..++++..|...   .++           
T Consensus        87 ~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~---~~~-----------  152 (429)
T 3qe7_A           87 YEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPA---EGQ-----------  152 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCB---TTB-----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCC---CCc-----------
Confidence            678899999999999999998  764  89999999999999999999999999887543211   011           


Q ss_pred             cCcCccchhHHHHHHHHHHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHhhcCCCCeeEeeccC-CCCCCCCCC
Q 009895          113 LHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIK-GGLNPSSAH  191 (523)
Q Consensus       113 ~~~~~~~~~~~~lg~~~l~~l~~~~~~~~~~~~~~~~p~~~~li~vv~~~~~~~~~~~~~~~~~~~g~ip-~~~p~~~~~  191 (523)
                        .  .++.++.++++++++++++.++.|++.|     .+++|+++++++++++.++..+  .+.+++.| .++|.+..|
T Consensus       153 --~--~~~~~~~la~~tl~iii~~~~~~kg~~~-----~~aiLigivvg~~~a~~~G~~d--~~~v~~a~~~~lP~~~~P  221 (429)
T 3qe7_A          153 --T--PDSKTIIISITTLAVTVLGSVLFRGFLA-----IIPILIGVLVGYALSFAMGIVD--TTPIINAHWFALPTLYTP  221 (429)
T ss_dssp             --C--CCHHHHHHHHHHHHHHHHHHHSSSTTTT-----THHHHHHHHHHHHHHHHHHHTT--SSHHHHSCSSCCCCCCCC
T ss_pred             --c--ccHHHHHHHHHHHHHHHHHHHHhcccch-----hhHHHHHHHHHHHHHHHhcCCC--cccccccccccccCCCCC
Confidence              1  5677889999999888888776666543     2379999999999999988532  22233332 346666666


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC----ccCCchhHHHHhHHHHHhhhcCCccCCCccchhhhh
Q 009895          192 QLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGY----HLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVN  267 (523)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~n~el~a~G~aNivs~lfGg~p~~~~~s~s~~~  267 (523)
                      +++|  ..+    ...+.++++.++|++.+..+.++..++    +.+.|||+.++|++|+++|+||++|.+++..++++.
T Consensus       222 ~f~~--~~i----~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla~i~~glfGg~p~Tt~~en~g~i  295 (429)
T 3qe7_A          222 RFEW--FAI----LTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVM  295 (429)
T ss_dssp             CCCH--HHH----HHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHH
T ss_pred             cccH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcCCCCcchHHHhHHHH
Confidence            5443  333    334567788889999988888877764    457899999999999999999999999766666778


Q ss_pred             hhcCCCcchhHHHHHHHHHHHHHH--HhhHhhhhhhHHHHHHHHHHhcccCCHHHHHhh--hhcCc---hhHHHHHHHHH
Q 009895          268 FSAGCQTVVSNIVMAITVLLSLEL--FTSLLYYTPIAILASIILSALPGLIDINEAINI--YKVDK---LDFLACIGAFL  340 (523)
Q Consensus       268 ~~~Ga~t~~s~i~~~~~~l~~~~~--~~~ll~~iP~~vla~ili~~~~~l~~~~~~~~~--~~~~~---~d~~v~~~t~~  340 (523)
                      ..+|++||++.+++|++++++.++  ++++++.||.+++||+.++ .+.++....+|.+  .|.+.   ++..+..+++.
T Consensus       296 ~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~-lfg~i~~~Gi~~l~~~~v~~~~~rn~~i~~~~l~  374 (429)
T 3qe7_A          296 AITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLL-LYGVIGASGIRVLIESKVDYNKAQNLILTSVILI  374 (429)
T ss_dssp             HHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHH-HHHHHHHHHHHHHHHTTSCTTSHHHHHHHHHHHH
T ss_pred             HhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHH
Confidence            889999999999999988877654  6789999999999998765 8899999999988  67664   34455444443


Q ss_pred             H
Q 009895          341 G  341 (523)
Q Consensus       341 ~  341 (523)
                      .
T Consensus       375 ~  375 (429)
T 3qe7_A          375 I  375 (429)
T ss_dssp             H
T ss_pred             H
Confidence            3
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Back     alignment and structure
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Back     alignment and structure
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum} Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Back     alignment and structure
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A* Back     alignment and structure
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A Back     alignment and structure
>3agd_A Salt-tolerant glutaminase; glutaminase super family, hydrolase; 2.20A {Micrococcus luteus} PDB: 3age_A* 3if5_A 3ih8_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A Back     alignment and structure
>3bl4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 2.20A {Arthrobacter SP} Back     alignment and structure
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2 Back     alignment and structure
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 523
d1th8b_115 c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa 1e-12
d1vc1a_110 c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa 2e-11
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 62.2 bits (151), Expect = 1e-12
 Identities = 22/125 (17%), Positives = 52/125 (41%), Gaps = 17/125 (13%)

Query: 391 MAIKT---PGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMS 447
           +AI       +L +R++  L     A  +RE++   +              I+ +++++ 
Sbjct: 2   LAIDLEVKQDVLIVRLSGELD-HHTAEELREQVTDVLENRA----------IRHIVLNLG 50

Query: 448 NSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAE 507
               +D+SG+ V+   +K++ + G ++V+ +    V      + L   I    V      
Sbjct: 51  QLTFMDSSGLGVILGRYKQIKNVGGQMVVCAVSPAVKRLFDMSGLFKIIR---VEADEQF 107

Query: 508 AMEAC 512
           A++A 
Sbjct: 108 ALQAL 112
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Length = 110 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
d1h4xa_111 Anti-sigma factor antagonist SpoIIaa {Bacillus sph 99.73
d1th8b_115 Anti-sigma factor antagonist SpoIIaa {Bacillus ste 99.72
d1vc1a_110 Anti-sigma factor antagonist SpoIIaa {Thermotoga m 99.71
d2q3la1125 Uncharacterized protein Shew3102 {Shewanella loihi 83.63
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus sphaericus [TaxId: 1421]

Probab=99.73  E-value=4.2e-18  Score=141.65  Aligned_cols=102  Identities=14%  Similarity=0.173  Sum_probs=95.0

Q ss_pred             CcEEEEEECCCceeEechHHHHHHHHHHHHhhhhhhhhhccCCceEEEEEecCCCccChHHHHHHHHHHHHHHhCCCEEE
Q 009895          396 PGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELV  475 (523)
Q Consensus       396 ~~i~ii~l~G~~L~f~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vIlD~s~v~~iDssgl~~L~~~~~~~~~~g~~l~  475 (523)
                      +++.+++++|+ |+|+|+++|++++.+.+++          ++++.+|+||++|+++|+||+++|.++.++++++|+++.
T Consensus         9 ~~~~vv~~~G~-L~~~~a~~~~~~~~~~i~~----------~~~~~vvlD~s~v~~iDssgl~~L~~~~~~~~~~g~~l~   77 (111)
T d1h4xa_           9 RETVVIRLFGE-LDHHAVEQIRAKISTAIFQ----------GAVTTIIWNFERLSFMDSSGVGLVLGRMRELEAVAGRTI   77 (111)
T ss_dssp             TTEEEEEEEEE-ECHHHHHHHHHHHHHHHHH----------TSCSEEEEEEEEEEEECTHHHHHHHHHHHHHHTTTCEEE
T ss_pred             CCEEEEEEEEE-EEHHHHHHHHHHHHHHHhc----------CCCcEEEEEEECCcccCchHHHHHHHHHHHHHHCCCEEE
Confidence            46899999999 9999999999999887653          457899999999999999999999999999999999999


Q ss_pred             EEcCCHHHHHHHHHCCCccccCCcccccCHHHHHHHH
Q 009895          476 MASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEAC  512 (523)
Q Consensus       476 l~~~~~~v~~~l~~~gl~~~~~~~~if~s~~~Al~~~  512 (523)
                      ++|+++++++.|+.+|+.+.+    .|+|.+||++.+
T Consensus        78 l~~~~~~v~~~l~~~gl~~~~----~~~t~~eAl~~i  110 (111)
T d1h4xa_          78 LLNPSPTMRKVFQFSGLGPWM----MDATEEEAIDRV  110 (111)
T ss_dssp             EESCCHHHHHHHHHTTCGGGE----ECSCHHHHHHHT
T ss_pred             EecCCHHHHHHHHHcCCCeEE----eeCCHHHHHHhc
Confidence            999999999999999998776    799999999875
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2q3la1 c.13.2.2 (A:1-125) Uncharacterized protein Shew3102 {Shewanella loihica [TaxId: 359303]} Back     information, alignment and structure