Citrus Sinensis ID: 009981
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 521 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LIR6 | 575 | Beta-amylase 1, chloropla | yes | no | 0.786 | 0.713 | 0.487 | 1e-124 | |
| O23553 | 548 | Beta-amylase 3, chloropla | no | no | 0.863 | 0.821 | 0.445 | 1e-116 | |
| O22585 | 496 | Beta-amylase OS=Medicago | N/A | no | 0.798 | 0.838 | 0.373 | 2e-84 | |
| P10537 | 499 | Beta-amylase OS=Ipomoea b | N/A | no | 0.781 | 0.815 | 0.372 | 2e-82 | |
| P16098 | 535 | Beta-amylase OS=Hordeum v | N/A | no | 0.779 | 0.758 | 0.372 | 5e-81 | |
| P82993 | 535 | Beta-amylase OS=Hordeum v | N/A | no | 0.779 | 0.758 | 0.375 | 7e-81 | |
| O64407 | 496 | Beta-amylase OS=Vigna ung | N/A | no | 0.798 | 0.838 | 0.361 | 4e-80 | |
| P55005 | 488 | Beta-amylase OS=Zea mays | N/A | no | 0.819 | 0.875 | 0.349 | 7e-80 | |
| O65015 | 496 | Beta-amylase OS=Trifolium | N/A | no | 0.786 | 0.826 | 0.366 | 6e-79 | |
| P10538 | 496 | Beta-amylase OS=Glycine m | no | no | 0.802 | 0.842 | 0.371 | 1e-78 |
| >sp|Q9LIR6|BAM1_ARATH Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/433 (48%), Positives = 281/433 (64%), Gaps = 23/433 (5%)
Query: 77 PVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGY 136
PVFV +P DS +G V RRKAM S +AL +AGVEG++++VWWG+VE++ PG Y+W GY
Sbjct: 107 PVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGTYNWGGY 166
Query: 137 FDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNM 196
+L+ LA GLKV+A+++FHQCG GD +PLPQWV+EE+DKDPDLAY+D++GRRN
Sbjct: 167 NELLELAKKLGLKVQAVMSFHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNH 226
Query: 197 EYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITKLM--------------- 241
EYISLG D LPVL+GR+P+Q Y DFMR FRD F+ LLG I ++
Sbjct: 227 EYISLGADTLPVLKGRTPVQCYADFMRAFRDNFKHLLGETIVEIQVGMGPAGELRYPSYP 286
Query: 242 ---WSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRT 298
+W+ +G FQCYDKY L+SL A A G EWG GP A + PE T+FF+
Sbjct: 287 EQEGTWKFPGIGAFQCYDKYSLSSLKAAAETYGKPEWGSTGPTDAGHYNNWPEDTQFFKK 346
Query: 299 DNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHP 358
+ G WN+ YG+FFL WYS MLL HGERI A++IF V S K+ GIHWHYGT SH
Sbjct: 347 EGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKIAGIHWHYGTRSHA 406
Query: 359 SELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLL 418
ELTAGYYNT RDG+LPIA++ R+ +C EMRD ++ Q + +PE + Q+ L
Sbjct: 407 PELTAGYYNTRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQ-DALCAPEKLVNQVAL 465
Query: 419 AARICEIPLEGENSATSLDDAAFQQVIKMSKF----YSEGLEKPSFSFNFLRMDKNMFEY 474
A E+PL GEN+ DD A +Q++K S +EG + +F +LRM+ +F+
Sbjct: 466 ATLAAEVPLAGENALPRYDDYAHEQILKASALNLDQNNEGEPREMCAFTYLRMNPELFQA 525
Query: 475 HNWVRFTRFVRQL 487
NW +F FV+++
Sbjct: 526 DNWGKFVAFVKKM 538
|
Beta-amylase activity. Can use p-nitrophenyl maltopentaoside (PNPG5) as substrate only in reduced form. Can play a minor role in the starch degradation and maltose metabolism in chloroplasts during the night. More active on phosphorylated glucan. Interacts directly with starch or other alpha-1,4-glucan. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2 |
| >sp|O23553|BAM3_ARATH Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=BAM3 PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|O22585|AMYB_MEDSA Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P10537|AMYB_IPOBA Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4 | Back alignment and function description |
|---|
| >sp|P16098|AMYB_HORVU Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P82993|AMYB_HORVS Beta-amylase OS=Hordeum vulgare subsp. spontaneum GN=BMY1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|O64407|AMYB_VIGUN Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P55005|AMYB_MAIZE Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|O65015|AMYB_TRIRP Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P10538|AMYB_SOYBN Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 521 | ||||||
| 402171764 | 541 | beta-amylase 3 [Citrus trifoliata] | 1.0 | 0.963 | 0.950 | 0.0 | |
| 224053751 | 555 | predicted protein [Populus trichocarpa] | 1.0 | 0.938 | 0.636 | 0.0 | |
| 147795448 | 542 | hypothetical protein VITISV_014849 [Viti | 0.969 | 0.931 | 0.667 | 0.0 | |
| 359473953 | 584 | PREDICTED: beta-amylase 1, chloroplastic | 0.905 | 0.808 | 0.698 | 0.0 | |
| 449453308 | 546 | PREDICTED: beta-amylase 1, chloroplastic | 0.888 | 0.847 | 0.689 | 0.0 | |
| 356527702 | 553 | PREDICTED: beta-amylase 1, chloroplastic | 0.988 | 0.931 | 0.616 | 0.0 | |
| 224075158 | 437 | predicted protein [Populus trichocarpa] | 0.800 | 0.954 | 0.702 | 0.0 | |
| 356513259 | 557 | PREDICTED: beta-amylase 3, chloroplastic | 0.965 | 0.903 | 0.628 | 0.0 | |
| 356513261 | 557 | PREDICTED: beta-amylase 3, chloroplastic | 0.965 | 0.903 | 0.618 | 1e-178 | |
| 449525309 | 395 | PREDICTED: beta-amylase 1, chloroplastic | 0.633 | 0.835 | 0.763 | 1e-161 |
| >gi|402171764|gb|AFQ33615.1| beta-amylase 3 [Citrus trifoliata] | Back alignment and taxonomy information |
|---|
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/541 (95%), Positives = 516/541 (95%), Gaps = 20/541 (3%)
Query: 1 MAIATFAPSFCCTRTEPTQLPRFRLTHSHKLQSQTRRLSVSCRLNSSNSLSPADNNNNNR 60
MAIATFAPSFCCTRTEPTQLPRFRLTHSHK QSQTRRLSVSCRLNSSNSLSPADNNNNNR
Sbjct: 1 MAIATFAPSFCCTRTEPTQLPRFRLTHSHKFQSQTRRLSVSCRLNSSNSLSPADNNNNNR 60
Query: 61 YKLHDGASSQGRRNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWW 120
YKLHDGASSQGRRNGSPVFVKLPEDSTMIGGKVK RKAMAQSFKALAAAGVEGVVVEVWW
Sbjct: 61 YKLHDGASSQGRRNGSPVFVKLPEDSTMIGGKVKGRKAMAQSFKALAAAGVEGVVVEVWW 120
Query: 121 GVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEID 180
GVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSG GDPKWVPLPQWVLEEID
Sbjct: 121 GVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGSGDPKWVPLPQWVLEEID 180
Query: 181 KDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIIT-- 238
KDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIIT
Sbjct: 181 KDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITGV 240
Query: 239 ------------------KLMWSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGP 280
KL WSWRSRELGEFQCYDKYMLASLNACARE+GMREWGDGGP
Sbjct: 241 QVGMGPAGELRYPSLPSQKLTWSWRSRELGEFQCYDKYMLASLNACAREVGMREWGDGGP 300
Query: 281 IGASNLMQDPEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVN 340
IGASNLMQDPEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVN
Sbjct: 301 IGASNLMQDPEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVN 360
Query: 341 TSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDE 400
TSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSC EMRDVDE
Sbjct: 361 TSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCLEMRDVDE 420
Query: 401 KQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSF 460
KQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSF
Sbjct: 421 KQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSF 480
Query: 461 SFNFLRMDKNMFEYHNWVRFTRFVRQLSGSSIFRAKLDFRGDIRPSSASDFAKVGLAFAY 520
SFNF+RMDKNMFEYHNWVRFTRFVRQLSGSSIFRAKLDFRGDIRPSSASDFAKVGLAFAY
Sbjct: 481 SFNFVRMDKNMFEYHNWVRFTRFVRQLSGSSIFRAKLDFRGDIRPSSASDFAKVGLAFAY 540
Query: 521 C 521
C
Sbjct: 541 C 541
|
Source: Citrus trifoliata Species: Citrus trifoliata Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224053751|ref|XP_002297961.1| predicted protein [Populus trichocarpa] gi|222845219|gb|EEE82766.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|147795448|emb|CAN65860.1| hypothetical protein VITISV_014849 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359473953|ref|XP_002263816.2| PREDICTED: beta-amylase 1, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449453308|ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356527702|ref|XP_003532447.1| PREDICTED: beta-amylase 1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224075158|ref|XP_002304568.1| predicted protein [Populus trichocarpa] gi|222842000|gb|EEE79547.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356513259|ref|XP_003525331.1| PREDICTED: beta-amylase 3, chloroplastic-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356513261|ref|XP_003525332.1| PREDICTED: beta-amylase 3, chloroplastic-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449525309|ref|XP_004169660.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 521 | ||||||
| TAIR|locus:2076086 | 575 | BAM1 "beta-amylase 1" [Arabido | 0.468 | 0.424 | 0.453 | 1.3e-105 | |
| TAIR|locus:2130504 | 548 | CT-BMY "chloroplast beta-amyla | 0.458 | 0.436 | 0.467 | 3.7e-99 | |
| TAIR|locus:2162152 | 531 | BAM4 "beta-amylase 4" [Arabido | 0.458 | 0.450 | 0.383 | 5.4e-65 | |
| TAIR|locus:2062535 | 577 | BAM6 "beta-amylase 6" [Arabido | 0.685 | 0.618 | 0.363 | 3.4e-61 | |
| TAIR|locus:2129810 | 498 | BAM5 "beta-amylase 5" [Arabido | 0.604 | 0.632 | 0.352 | 2.3e-54 | |
| TAIR|locus:2127033 | 542 | BAM2 "beta-amylase 2" [Arabido | 0.792 | 0.761 | 0.308 | 1.1e-53 | |
| TAIR|locus:2180029 | 536 | BMY3 "beta-amylase 3" [Arabido | 0.763 | 0.742 | 0.311 | 1.5e-51 | |
| TAIR|locus:2158455 | 689 | BMY2 "beta-amylase 2" [Arabido | 0.608 | 0.460 | 0.354 | 1.8e-46 | |
| TAIR|locus:2050720 | 691 | BAM7 "beta-amylase 7" [Arabido | 0.696 | 0.525 | 0.323 | 3.2e-44 |
| TAIR|locus:2076086 BAM1 "beta-amylase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 592 (213.5 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 113/249 (45%), Positives = 153/249 (61%)
Query: 243 SWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDNGL 302
+W+ +G FQCYDKY L+SL A A G EWG GP A + PE T+FF+ + G
Sbjct: 291 TWKFPGIGAFQCYDKYSLSSLKAAAETYGKPEWGSTGPTDAGHYNNWPEDTQFFKKEGGG 350
Query: 303 WNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELT 362
WN+ YG+FFL WYS MLL HGERI A++IF V S K+ GIHWHYGT SH ELT
Sbjct: 351 WNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKIAGIHWHYGTRSHAPELT 410
Query: 363 AGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARI 422
AGYYNT RDG+LPIA++ R+ +C EMRD ++ Q + +PE + Q+ LA
Sbjct: 411 AGYYNTRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQ-DALCAPEKLVNQVALATLA 469
Query: 423 CEIPLEGENSATSLDDAAFQQVIKMSKFY----SEGLEKPSFSFNFLRMDKNMFEYHNWV 478
E+PL GEN+ DD A +Q++K S +EG + +F +LRM+ +F+ NW
Sbjct: 470 AEVPLAGENALPRYDDYAHEQILKASALNLDQNNEGEPREMCAFTYLRMNPELFQADNWG 529
Query: 479 RFTRFVRQL 487
+F FV+++
Sbjct: 530 KFVAFVKKM 538
|
|
| TAIR|locus:2130504 CT-BMY "chloroplast beta-amylase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2162152 BAM4 "beta-amylase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2062535 BAM6 "beta-amylase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2129810 BAM5 "beta-amylase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2127033 BAM2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2180029 BMY3 "beta-amylase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2158455 BMY2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2050720 BAM7 "beta-amylase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | 0.766 |
| 3rd Layer | 3.2.1.2 | 0.824 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 521 | |||
| PLN02803 | 548 | PLN02803, PLN02803, beta-amylase | 1e-178 | |
| PLN00197 | 573 | PLN00197, PLN00197, beta-amylase; Provisional | 1e-170 | |
| PLN02801 | 517 | PLN02801, PLN02801, beta-amylase | 1e-112 | |
| PLN02161 | 531 | PLN02161, PLN02161, beta-amylase | 8e-98 | |
| PLN02905 | 702 | PLN02905, PLN02905, beta-amylase | 2e-88 | |
| pfam01373 | 399 | pfam01373, Glyco_hydro_14, Glycosyl hydrolase fami | 1e-79 | |
| PLN02705 | 681 | PLN02705, PLN02705, beta-amylase | 4e-66 |
| >gnl|CDD|178400 PLN02803, PLN02803, beta-amylase | Back alignment and domain information |
|---|
Score = 510 bits (1316), Expect = e-178
Identities = 227/475 (47%), Positives = 293/475 (61%), Gaps = 26/475 (5%)
Query: 34 QTRRLSVSCRLNSSNSLSPADNNNNNRYKLHDGASSQGRRNGS-PVFVKLPEDSTMIGGK 92
Q + +L +P + N KLH + + + PVFV LP D+ +GG
Sbjct: 43 QAKNSMQEAQLTHEEIFTPEGRKSENWEKLHALSGPHSKNDSGVPVFVMLPLDTVTMGGN 102
Query: 93 VKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVRA 152
+ + +AM S AL +AGVEGV+V+ WWG+VE+D P Y+W GY +L+ + GLK++
Sbjct: 103 LNKPRAMNASLMALRSAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQKHGLKLQV 162
Query: 153 LLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNMEYISLGCDILPVLRGR 212
+++FHQCG GD +PLP WVLEE+ K+PDL Y+DR GRRN EYISLGCD LPVLRGR
Sbjct: 163 VMSFHQCGGNVGDSCSIPLPPWVLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGR 222
Query: 213 SPIQAYTDFMRNFRDTFRPLLGAIITKLM------------------WSWRSRELGEFQC 254
+PIQ Y+D+MR+FR+ F+ LG +I ++ +WR +GEFQC
Sbjct: 223 TPIQVYSDYMRSFRERFKDYLGGVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQC 282
Query: 255 YDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDNGLWNTAYGNFFLEW 314
YDKYM ASL A A IG ++WG GGP A Q PE T FFR D G WNT YG FFLEW
Sbjct: 283 YDKYMRASLEASAEAIGKKDWGRGGPHDAGEYKQFPEETGFFRRD-GTWNTEYGQFFLEW 341
Query: 315 YSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDGF 374
YSG LL HG+RI AE IF+GT S KV GIHWHY T SH +ELTAGYYNT DG+
Sbjct: 342 YSGKLLEHGDRILAAAEGIFQGTGAKLSGKVAGIHWHYRTRSHAAELTAGYYNTRNHDGY 401
Query: 375 LPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARICEIPLEGENSAT 434
LPIAR+F ++G L +C EMRD E+ + SPEG +RQ+ +A R L GEN+
Sbjct: 402 LPIARMFSKHGVVLNFTCMEMRD-GEQPEHANCSPEGLVRQVKMATRTAGTELAGENALE 460
Query: 435 SLDDAAFQQVIKMSKFYS-EGLEKPSFSFNFLRMDKNMFEYHNWVRFTRFVRQLS 488
D AAF QV+ S+ S GL +F +LRM+K +FE NW + FV+ +S
Sbjct: 461 RYDSAAFAQVVATSRSDSGNGLT----AFTYLRMNKRLFEGDNWRQLVEFVKNMS 511
|
Length = 548 |
| >gnl|CDD|215099 PLN00197, PLN00197, beta-amylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215431 PLN02801, PLN02801, beta-amylase | Back alignment and domain information |
|---|
| >gnl|CDD|177820 PLN02161, PLN02161, beta-amylase | Back alignment and domain information |
|---|
| >gnl|CDD|178493 PLN02905, PLN02905, beta-amylase | Back alignment and domain information |
|---|
| >gnl|CDD|216462 pfam01373, Glyco_hydro_14, Glycosyl hydrolase family 14 | Back alignment and domain information |
|---|
| >gnl|CDD|178307 PLN02705, PLN02705, beta-amylase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 521 | |||
| PLN02803 | 548 | beta-amylase | 100.0 | |
| PLN00197 | 573 | beta-amylase; Provisional | 100.0 | |
| PLN02801 | 517 | beta-amylase | 100.0 | |
| PLN02161 | 531 | beta-amylase | 100.0 | |
| PLN02905 | 702 | beta-amylase | 100.0 | |
| PLN02705 | 681 | beta-amylase | 100.0 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 100.0 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.94 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 99.87 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 99.0 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 98.6 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 98.38 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 98.16 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 97.98 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 97.7 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 97.62 | |
| PLN02814 | 504 | beta-glucosidase | 97.56 | |
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 97.56 | |
| PLN02998 | 497 | beta-glucosidase | 97.51 | |
| PLN02849 | 503 | beta-glucosidase | 97.44 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 97.41 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 97.4 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 97.35 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 97.32 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 97.29 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 97.15 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 96.97 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 96.56 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 96.38 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 96.14 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 95.96 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 94.07 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 92.98 | |
| cd00465 | 306 | URO-D_CIMS_like The URO-D_CIMS_like protein superf | 92.16 | |
| PRK11572 | 248 | copper homeostasis protein CutC; Provisional | 91.97 | |
| cd03465 | 330 | URO-D_like The URO-D _like protein superfamily inc | 91.34 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 90.88 | |
| PF10566 | 273 | Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: | 90.66 | |
| PF03932 | 201 | CutC: CutC family; InterPro: IPR005627 Copper tran | 90.61 | |
| cd03311 | 332 | CIMS_C_terminal_like CIMS - Cobalamine-independent | 90.01 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 89.33 | |
| TIGR01463 | 340 | mtaA_cmuA methyltransferase, MtaA/CmuA family. Thi | 88.87 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 88.22 | |
| COG3142 | 241 | CutC Uncharacterized protein involved in copper re | 88.13 | |
| PF03659 | 386 | Glyco_hydro_71: Glycosyl hydrolase family 71 ; Int | 85.65 | |
| PF02065 | 394 | Melibiase: Melibiase; InterPro: IPR000111 O-Glycos | 85.64 | |
| cd02742 | 303 | GH20_hexosaminidase Beta-N-acetylhexosaminidases o | 85.01 | |
| cd06592 | 303 | GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact | 84.84 | |
| PLN02361 | 401 | alpha-amylase | 84.76 | |
| PRK13111 | 258 | trpA tryptophan synthase subunit alpha; Provisiona | 84.68 | |
| PF00290 | 259 | Trp_syntA: Tryptophan synthase alpha chain; InterP | 84.65 | |
| cd06564 | 326 | GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( | 84.58 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 84.48 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 83.86 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 83.63 | |
| cd06565 | 301 | GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) | 82.14 | |
| cd00717 | 335 | URO-D Uroporphyrinogen decarboxylase (URO-D) is a | 81.59 | |
| cd06593 | 308 | GH31_xylosidase_YicI YicI alpha-xylosidase is a gl | 81.42 | |
| PRK10658 | 665 | putative alpha-glucosidase; Provisional | 80.84 | |
| PRK01060 | 281 | endonuclease IV; Provisional | 80.67 | |
| PRK00115 | 346 | hemE uroporphyrinogen decarboxylase; Validated | 80.03 |
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-173 Score=1366.76 Aligned_cols=488 Identities=46% Similarity=0.819 Sum_probs=438.3
Q ss_pred ccccccceecccCcCCCCCCCccccccccCccc-ccccccccccCCCCCCCCCC-----CCCccccccCCCC-CCCCCCc
Q 009981 4 ATFAPSFCCTRTEPTQLPRFRLTHSHKLQSQTR-RLSVSCRLNSSNSLSPADNN-----NNNRYKLHDGASS-QGRRNGS 76 (521)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~v 76 (521)
.++.+.+||+....+.+. .|+..++.. |++.+..+++......+..+ .....+.+++.+. .+..++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 86 (548)
T PLN02803 13 SPKDTKSLKTPDDFSGTI------CFAPIKPSCYRLQAKNSMQEAQLTHEEIFTPEGRKSENWEKLHALSGPHSKNDSGV 86 (548)
T ss_pred CCcccccccccccccccc------cccCCCCcccccccccccchhhcccCcccCccccccccccccccccCcccccCCce
Confidence 356667777776666544 444444433 44445555543333322211 1112233343322 4678899
Q ss_pred ceEEeeecceecCCCeecCHHHHHHHHHHHHHcCCceEEEeeeeeeeecCCCcccccchHHHHHHHHHHCCCcEEEEEee
Q 009981 77 PVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAF 156 (521)
Q Consensus 77 pv~VMlPLd~v~~~~~v~~~~~~~~dL~~LK~aGVdgV~vdVwWG~VE~~~p~~Ydws~Y~~l~~mv~~~GLKv~~vlsf 156 (521)
|||||||||+|+++|+|+++++++++|++||++||||||||||||+||+++|++|||++|++|++|||++||||||||||
T Consensus 87 pvyVMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~p~~YdWsgY~~l~~mvr~~GLKlq~vmSF 166 (548)
T PLN02803 87 PVFVMLPLDTVTMGGNLNKPRAMNASLMALRSAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQKHGLKLQVVMSF 166 (548)
T ss_pred eEEEEeecceeccCCcccCHHHHHHHHHHHHHcCCCEEEEEeeeeeeccCCCCcCCcHHHHHHHHHHHHcCCeEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCccccChhhhhhhccCCCeeeeCCCCcccccccccccCcccccCCCCchHHHHHHHHHHHHHHhHhhhhh
Q 009981 157 HQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAI 236 (521)
Q Consensus 157 HqCGGNVGDt~~ipLP~WV~~~~~k~PDI~~tD~~G~r~~EclSlg~D~~pv~~GRTpi~~Y~dfm~sF~~~fa~~~g~v 236 (521)
|||||||||+|+||||+||++++++||||+||||+|+||+||||||||++||++||||+|+|+|||+||+++|++|+++|
T Consensus 167 HqCGGNVGD~~~IpLP~WV~e~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~~~ 246 (548)
T PLN02803 167 HQCGGNVGDSCSIPLPPWVLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYSDYMRSFRERFKDYLGGV 246 (548)
T ss_pred cccCCCCCCcccccCCHHHHHhhhcCCCceEecCCCCcccceeccccccchhccCCCHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hh--------cCceeecc----------CCCCccccccHHHHHHHHHHHHHhcccccCCCCCCCCCcccCCCCCCCcccc
Q 009981 237 IT--------KLMWSWRS----------RELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRT 298 (521)
Q Consensus 237 I~--------~~eWry~~----------PGiGEFQCYdk~~~~~fr~~a~~~gn~~WG~~gP~~a~~Yn~~P~~t~FF~~ 298 (521)
|+ +||+|||+ |||||||||||||+++||++|+++||++||++||+|+|+||++|++|+||++
T Consensus 247 I~eI~VGlGP~GELRYPSYp~~~g~w~fPGiGEFQCYDky~l~~L~~aA~~~G~p~WG~~gP~dAg~Yn~~P~~t~FF~~ 326 (548)
T PLN02803 247 IAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRASLEASAEAIGKKDWGRGGPHDAGEYKQFPEETGFFRR 326 (548)
T ss_pred eEEEEeccccCccccCCCCcCcCCCccCCCccceeeccHHHHHHHHHHHHHhCCHhhccCCCCCcCcCCCCCCCCCCCCC
Confidence 87 77777762 9999999999999999999999999999999999999999999999999997
Q ss_pred CCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceEEEEecceeccCCCCCChhhhcccccCCCCCCChHHHH
Q 009981 299 DNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDGFLPIA 378 (521)
Q Consensus 299 ~~g~~~s~YGrFFL~WYs~~Li~HgdrIL~~A~~~F~~~~v~l~aKv~GIHWwy~t~SHaAElTAGyyN~~~rdGY~~Ia 378 (521)
+|+|+|+||||||+|||++|++||||||+.|+.+|.+++|+|++|||||||||+|+||||||||||||+++||||.||+
T Consensus 327 -~G~~~S~YG~FFL~WYs~~Ll~HgdrvL~~A~~~F~g~~v~l~aKv~GIHWwY~t~SHaAElTAGyYNt~~rdGY~~Ia 405 (548)
T PLN02803 327 -DGTWNTEYGQFFLEWYSGKLLEHGDRILAAAEGIFQGTGAKLSGKVAGIHWHYRTRSHAAELTAGYYNTRNHDGYLPIA 405 (548)
T ss_pred -CCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEEEeceeeeecCCCCchhhhccccccCCCcccHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHcCcEEEEeecccccCCcCCCCCCCChHHHHHHHHHHHHHcCCCeecccCccccChHHHHHHHHhhcccCCCCCCC
Q 009981 379 RIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKP 458 (521)
Q Consensus 379 ~mf~r~~~~l~fTclEM~d~e~p~~~~~s~Pe~Lv~Qv~~aa~~~Gv~~~GENAl~~~d~~~~~qi~~~~~~~~~~~~~~ 458 (521)
+|||||||+|+||||||+|.||| ++++|+||+||+||+++|+++||+|+|||||++||.++|+||++++++.. ..+
T Consensus 406 ~mf~rh~~~l~FTClEM~D~eqp-~~~~s~Pe~Lv~Qv~~aa~~~Gv~~aGENAL~~~d~~~~~qi~~~~~~~~---~~~ 481 (548)
T PLN02803 406 RMFSKHGVVLNFTCMEMRDGEQP-EHANCSPEGLVRQVKMATRTAGTELAGENALERYDSAAFAQVVATSRSDS---GNG 481 (548)
T ss_pred HHHHHcCCeEEEEecCcccCCCC-ccccCCHHHHHHHHHHHHHHcCCceeeeccccccCHHHHHHHHHhhcccc---cCc
Confidence 99999999999999999999999 69999999999999999999999999999999999999999999987532 136
Q ss_pred cceeeEecCCccccCCcChHHHHHHHHHhhCCcc--ccccccccCC
Q 009981 459 SFSFNFLRMDKNMFEYHNWVRFTRFVRQLSGSSI--FRAKLDFRGD 502 (521)
Q Consensus 459 ~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~--~~~~~~~~~~ 502 (521)
|++||||||+++||+++||++|++|||+||++++ .++.++..+.
T Consensus 482 ~~~FTyLRm~~~lf~~~n~~~F~~FVr~M~~~~~~~~~~~~~~~~~ 527 (548)
T PLN02803 482 LTAFTYLRMNKRLFEGDNWRQLVEFVKNMSEGGRNRRLPECDTEGS 527 (548)
T ss_pred eeeeEEecCChHHcChhhHHHHHHHHHHhcCccccCccchhhccCc
Confidence 8899999999999999999999999999999876 5677777654
|
|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
| >cd00465 URO-D_CIMS_like The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases, as well as cobalamine (B12) independent methionine synthases | Back alignment and domain information |
|---|
| >PRK11572 copper homeostasis protein CutC; Provisional | Back alignment and domain information |
|---|
| >cd03465 URO-D_like The URO-D _like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases | Back alignment and domain information |
|---|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
| >PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF | Back alignment and domain information |
|---|
| >cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like | Back alignment and domain information |
|---|
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01463 mtaA_cmuA methyltransferase, MtaA/CmuA family | Back alignment and domain information |
|---|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
| >COG3142 CutC Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
| >cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase | Back alignment and domain information |
|---|
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
| >PRK13111 trpA tryptophan synthase subunit alpha; Provisional | Back alignment and domain information |
|---|
| >PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4 | Back alignment and domain information |
|---|
| >cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins | Back alignment and domain information |
|---|
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
| >cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins | Back alignment and domain information |
|---|
| >cd00717 URO-D Uroporphyrinogen decarboxylase (URO-D) is a dimeric cytosolic enzyme that decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, without requiring any prosthetic groups or cofactors | Back alignment and domain information |
|---|
| >cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose | Back alignment and domain information |
|---|
| >PRK10658 putative alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
| >PRK01060 endonuclease IV; Provisional | Back alignment and domain information |
|---|
| >PRK00115 hemE uroporphyrinogen decarboxylase; Validated | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 521 | ||||
| 1fa2_A | 498 | Crystal Structure Of Beta-Amylase From Sweet Potato | 7e-75 | ||
| 1b1y_A | 500 | Sevenfold Mutant Of Barley Beta-Amylase Length = 50 | 6e-71 | ||
| 2xff_A | 535 | Crystal Structure Of Barley Beta-Amylase Complexed | 9e-71 | ||
| 1wdr_A | 495 | The Role Of An Inner Loop In The Catalytic Mechanis | 1e-68 | ||
| 1q6g_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant (N | 2e-68 | ||
| 1bya_A | 495 | Crystal Structures Of Soybean Beta-Amylase Reacted | 2e-68 | ||
| 1btc_A | 491 | Three-Dimensional Structure Of Soybean Beta-Amylase | 2e-68 | ||
| 1q6e_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant (E | 3e-68 | ||
| 1v3h_A | 495 | The Roles Of Glu186 And Glu380 In The Catalytic Rea | 3e-68 | ||
| 1q6d_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant (M | 3e-68 | ||
| 1wds_A | 495 | The Role Of An Inner Loop In The Catalytic Mechanis | 3e-68 | ||
| 1q6c_A | 495 | Crystal Structure Of Soybean Beta-Amylase Complexed | 4e-68 | ||
| 2dqx_A | 495 | Mutant Beta-Amylase (W55r) From Soy Bean Length = 4 | 5e-68 | ||
| 1wdq_A | 495 | The Role Of An Inner Loop In The Catalytic Mechanis | 7e-68 | ||
| 1v3i_A | 495 | The Roles Of Glu186 And Glu380 In The Catalytic Rea | 8e-68 | ||
| 1ukp_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant Su | 8e-68 | ||
| 1uko_A | 495 | Crystal Structure Of Soybean Beta-Amylase Mutant Su | 1e-67 | ||
| 1veo_A | 516 | Crystal Structure Analysis Of Y164fMALTOSE OF BACIL | 4e-18 | ||
| 1itc_A | 516 | Beta-amylase From Bacillus Cereus Var. Mycoides Com | 4e-18 | ||
| 1b90_A | 516 | Bacillus Cereus Beta-Amylase Apo Form Length = 516 | 5e-18 | ||
| 1ven_A | 516 | Crystal Structure Analysis Of Y164eMALTOSE OF BACIL | 5e-18 | ||
| 1vep_A | 516 | Crystal Structure Analysis Of Triple (T47mY164ET328 | 9e-18 | ||
| 3voc_A | 419 | Crystal Structure Of The Catalytic Domain Of Beta-a | 2e-16 |
| >pdb|1FA2|A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato Length = 498 | Back alignment and structure |
|
| >pdb|1B1Y|A Chain A, Sevenfold Mutant Of Barley Beta-Amylase Length = 500 | Back alignment and structure |
| >pdb|2XFF|A Chain A, Crystal Structure Of Barley Beta-Amylase Complexed With Acarbose Length = 535 | Back alignment and structure |
| >pdb|1WDR|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1Q6G|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum Length = 495 | Back alignment and structure |
| >pdb|1BYA|A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis Length = 495 | Back alignment and structure |
| >pdb|1BTC|A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodextrin Length = 491 | Back alignment and structure |
| >pdb|1Q6E|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (E178y) With Increased Ph Optimum At Ph 5.4 Length = 495 | Back alignment and structure |
| >pdb|1V3H|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1Q6D|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum Length = 495 | Back alignment and structure |
| >pdb|1WDS|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase Length = 495 | Back alignment and structure |
| >pdb|1Q6C|A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose Length = 495 | Back alignment and structure |
| >pdb|2DQX|A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean Length = 495 | Back alignment and structure |
| >pdb|1WDQ|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase Length = 495 | Back alignment and structure |
| >pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region Length = 495 | Back alignment and structure |
| >pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region Length = 495 | Back alignment and structure |
| >pdb|1VEO|A Chain A, Crystal Structure Analysis Of Y164fMALTOSE OF BACILLUS Cereus Beta-Amylase At Ph 4.6 Length = 516 | Back alignment and structure |
| >pdb|1ITC|A Chain A, Beta-amylase From Bacillus Cereus Var. Mycoides Complexed With Maltopentaose Length = 516 | Back alignment and structure |
| >pdb|1B90|A Chain A, Bacillus Cereus Beta-Amylase Apo Form Length = 516 | Back alignment and structure |
| >pdb|1VEN|A Chain A, Crystal Structure Analysis Of Y164eMALTOSE OF BACILUS Cereus Beta-Amylase At Ph 4.6 Length = 516 | Back alignment and structure |
| >pdb|1VEP|A Chain A, Crystal Structure Analysis Of Triple (T47mY164ET328N) MALTOSE OF BACILLUS CEREUS BETA-Amylase At Ph 6.5 Length = 516 | Back alignment and structure |
| >pdb|3VOC|A Chain A, Crystal Structure Of The Catalytic Domain Of Beta-amylase From Paenibacillus Polymyxa Length = 419 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* Length = 535 | Back alignment and structure |
|---|
Score = 494 bits (1274), Expect = e-172
Identities = 160/460 (34%), Positives = 239/460 (51%), Gaps = 26/460 (5%)
Query: 72 RRNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVY 131
+ N V+V LP D+ + + ++ + + L AGV+GV+V+VWWG+VE P Y
Sbjct: 6 KGNYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAY 65
Query: 132 DWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRF 191
DW Y L L GLK++A+++FHQCG GD +P+PQWV + +DPD+ Y+D
Sbjct: 66 DWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGH 125
Query: 192 GRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLL-GAIITKLMWS------- 243
G RN+EY++LG D P+ GRS +Q Y D+M +FR+ + L +I +
Sbjct: 126 GTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKEFLDAGVIVDIEVGLGPAGEM 185
Query: 244 ----------WRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHT 293
W +GEF CYDKY+ A A A +G EW P PE T
Sbjct: 186 RYPSYPQSHGWSFPGIGEFICYDKYLQADFKAAAAAVGHPEW--EFPNDVGQYNDTPERT 243
Query: 294 EFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYG 353
+FFR DNG + + G FFL WYS L+ HG+RI EA +F G +V + K+ GIHW Y
Sbjct: 244 QFFR-DNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYK 302
Query: 354 TPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFL 413
PSH +ELTAGYYN RDG+ IAR+ R+ ++ +C EMRD ++ S+PE +
Sbjct: 303 VPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSS-QAMSAPEELV 361
Query: 414 RQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPS----FSFNFLRMDK 469
+Q+L A + + EN+ D A+ +++ ++ + P F F +LR+
Sbjct: 362 QQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSN 421
Query: 470 NMFEYHNWVRFTRFVRQLSGSSIFRAKLDFRGDIRPSSAS 509
+ E N+ F FV ++ + +D + S
Sbjct: 422 QLVEGQNYANFKTFVDRMHANLPRDPYVDPMAPLPRSGPE 461
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 Length = 498 | Back alignment and structure |
|---|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* Length = 495 | Back alignment and structure |
|---|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Length = 516 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Length = 552 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 521 | |||
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 100.0 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 100.0 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 100.0 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 100.0 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.91 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.86 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 99.78 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 99.59 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 99.35 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 99.32 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 99.26 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 99.23 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 98.81 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 98.72 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 98.71 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 98.68 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 98.64 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 98.63 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 98.63 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 98.62 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 98.61 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 98.6 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 98.6 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 98.58 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 98.58 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 98.55 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 98.55 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.55 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 98.55 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 98.53 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 98.51 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 98.51 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 98.5 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 98.5 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 98.5 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 98.45 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 98.43 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 98.39 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 98.35 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 98.34 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 98.34 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 98.32 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 98.3 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 98.29 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 98.28 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 98.27 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 98.24 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 98.2 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 98.18 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 98.15 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 98.12 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 98.11 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 98.07 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 98.01 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 97.95 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 97.94 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 97.94 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 97.94 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 97.94 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 97.91 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 97.9 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 97.89 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 97.87 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 97.87 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 97.86 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 97.86 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 97.83 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 97.81 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 97.78 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 97.77 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 97.74 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 97.73 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 97.67 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 97.66 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 97.62 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 97.5 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 97.5 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 97.47 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 97.41 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 97.41 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 97.4 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 97.35 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 97.3 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 97.29 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 97.27 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 97.24 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 97.21 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 97.18 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 97.17 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 97.09 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 97.04 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 96.98 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 96.98 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 96.89 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 96.8 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 96.63 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 96.58 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 96.51 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 96.42 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 96.4 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 96.36 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 96.34 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 95.86 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 95.31 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 95.15 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 95.03 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 94.81 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 94.71 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 94.25 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 93.39 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 93.29 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 93.1 | |
| 1uas_A | 362 | Alpha-galactosidase; TIM-barrel, beta-alpha-barrel | 93.09 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 91.93 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 91.87 | |
| 1twd_A | 256 | Copper homeostasis protein CUTC; TIM-like protein, | 91.8 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 91.56 | |
| 2bdq_A | 224 | Copper homeostasis protein CUTC; alpha beta protei | 91.45 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 90.85 | |
| 2xn2_A | 732 | Alpha-galactosidase; hydrolase, glycosidase; HET: | 90.58 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 90.18 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 90.03 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 88.89 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 88.66 | |
| 4fnq_A | 729 | Alpha-galactosidase AGAB; glycoside hydrolase, hyd | 88.34 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 88.24 | |
| 3a24_A | 641 | Alpha-galactosidase; glycoside hydrolase family 97 | 88.1 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 87.66 | |
| 1zy9_A | 564 | Alpha-galactosidase; TM1192, struc genomics, joint | 87.49 | |
| 2d73_A | 738 | Alpha-glucosidase SUSB; glycoside hydrolase family | 87.2 | |
| 3iwp_A | 287 | Copper homeostasis protein CUTC homolog; conserved | 84.7 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 84.6 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 83.84 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 83.23 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 83.21 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 82.53 | |
| 1szn_A | 417 | Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma | 82.07 | |
| 3tva_A | 290 | Xylose isomerase domain protein TIM barrel; struct | 81.85 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 81.63 | |
| 3a5v_A | 397 | Alpha-galactosidase; beta/alpha barrel, N-glycosyl | 81.61 | |
| 1j93_A | 353 | UROD, uroporphyrinogen decarboxylase; beta barrel, | 81.22 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 80.98 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 80.11 | |
| 3nvt_A | 385 | 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; | 80.05 |
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-167 Score=1314.75 Aligned_cols=422 Identities=37% Similarity=0.720 Sum_probs=406.4
Q ss_pred CCCCcceEEeeecceecCCCeecCHHHHHHHHHHHHHcCCceEEEeeeeeeeecCCCcccccchHHHHHHHHHHCCCcEE
Q 009981 72 RRNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVR 151 (521)
Q Consensus 72 ~~~~vpv~VMlPLd~v~~~~~v~~~~~~~~dL~~LK~aGVdgV~vdVwWG~VE~~~p~~Ydws~Y~~l~~mv~~~GLKv~ 151 (521)
..++||||||||||+|+++|+|+++++++++|++||++||+|||||||||+||+++|++|||++|++|++|||++|||||
T Consensus 8 ~~~~vpv~VMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~~GLKlq 87 (495)
T 1wdp_A 8 LLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQ 87 (495)
T ss_dssp HTTCCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEE
T ss_pred cCCCccEEEeeecceecCCCeeCCHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeccCCCCCCCCccccChhhhhhhccCCCeeeeCCCCcccccccccccCcccccCCCCchHHHHHHHHHHHHHHhH
Q 009981 152 ALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRP 231 (521)
Q Consensus 152 ~vlsfHqCGGNVGDt~~ipLP~WV~~~~~k~PDI~~tD~~G~r~~EclSlg~D~~pv~~GRTpi~~Y~dfm~sF~~~fa~ 231 (521)
||||||||||||||+|+||||+||+++++++|||+||||+|+||+||||||||++|||+||||+|+|+|||+||+++|++
T Consensus 88 ~vmSFHqCGgNVGD~~~IPLP~WV~~~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SFr~~F~~ 167 (495)
T 1wdp_A 88 AIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSD 167 (495)
T ss_dssp EEEECSCBCCSTTCSCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTHH
T ss_pred EEEEeeecCCCCCCcccccCCHHHHHhhccCCCcEEECCCCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-hhhhh--------cCceeecc---------CCCCccccccHHHHHHHHHHHHHhcccccCCCCCCCCCcccCCCCCC
Q 009981 232 LL-GAIIT--------KLMWSWRS---------RELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHT 293 (521)
Q Consensus 232 ~~-g~vI~--------~~eWry~~---------PGiGEFQCYdk~~~~~fr~~a~~~gn~~WG~~gP~~a~~Yn~~P~~t 293 (521)
++ ++||+ +||+|||+ |||||||||||||+++||++|+++||++||+ |+++++||++|++|
T Consensus 168 ~~~~~~I~eI~VGlGP~GELRYPSYp~~~gW~fPGiGEFQCYDky~~~~Lk~aA~~~G~~~WG~--P~dag~yn~~P~~t 245 (495)
T 1wdp_A 168 FLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAGHPEWEL--PDDAGKYNDVPEST 245 (495)
T ss_dssp HHHTTCEEEEEECCSGGGBSSCCCSCGGGTCCTTCCCCCCCCSHHHHHHHHHHHHHTTCTTCCS--CSSSCCTTCCGGGS
T ss_pred hccCCeeEEEEeCccccccccCCCCccccCCCCCCcceeeechHHHHHHHHHHHHHhCchhhCC--CCCCCccCCCCCCC
Confidence 99 77777 78888873 8999999999999999999999999999997 89999999999999
Q ss_pred CccccCCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceEEEEecceeccCCCCCChhhhcccccCCCCCCC
Q 009981 294 EFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDG 373 (521)
Q Consensus 294 ~FF~~~~g~~~s~YGrFFL~WYs~~Li~HgdrIL~~A~~~F~~~~v~l~aKv~GIHWwy~t~SHaAElTAGyyN~~~rdG 373 (521)
+||++ +|+|+|+||||||+|||++|++||||||++|+++|++++|+|++|||||||||+|+|||||||||||||++|||
T Consensus 246 ~FF~~-~G~w~s~YGkFFL~WYs~~Ll~HgdrvL~~A~~~F~~~~v~l~~KV~GIHWwY~t~SHaAELTAGyYNt~~rdG 324 (495)
T 1wdp_A 246 GFFKS-NGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDG 324 (495)
T ss_dssp TTTST-TSGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEECCCCCTTTTSTTCHHHHHHTCCCBTTBCS
T ss_pred CCcCC-CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeceeeeccCCCCChHHhhcccccCCCCCc
Confidence 99998 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhHcCcEEEEeecccccCCcCCCCCCCChHHHHHHHHHHHHHcCCCeecccCccccChHHHHHHHHhhcccC-
Q 009981 374 FLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYS- 452 (521)
Q Consensus 374 Y~~Ia~mf~r~~~~l~fTclEM~d~e~p~~~~~s~Pe~Lv~Qv~~aa~~~Gv~~~GENAl~~~d~~~~~qi~~~~~~~~- 452 (521)
|.|||+|||||||+|+||||||+|.||| ++++|+||+||+||+++|+++||+|+|||||+|||.++|+||+++++++.
T Consensus 325 Y~~Ia~m~~rh~~~l~fTC~EM~d~eq~-~~~~s~Pe~Lv~QV~~aa~~~Gv~~aGENAL~~~d~~a~~qI~~~~~~~~~ 403 (495)
T 1wdp_A 325 YRPIARMLSRHHAILNFTCLEMRDSEQP-SDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQGV 403 (495)
T ss_dssp SHHHHHHHHTTTCEEEECCTTCCGGGSC-GGGCCCHHHHHHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTTCC
T ss_pred hHHHHHHHHHcCCeEEEEecCCCcCCCC-cccCCCHHHHHHHHHHHHHHhCCceeccccccccCHHHHHHHHHHhccccc
Confidence 9999999999999999999999999999 68999999999999999999999999999999999999999999998642
Q ss_pred ---CCCCCCcceeeEecCCccccCCcChHHHHHHHHHhhCCccccccc
Q 009981 453 ---EGLEKPSFSFNFLRMDKNMFEYHNWVRFTRFVRQLSGSSIFRAKL 497 (521)
Q Consensus 453 ---~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~~~~~~ 497 (521)
++...++++||||||++.||+++||++|++|||+||++.++.++.
T Consensus 404 ~~~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~~~~~~ 451 (495)
T 1wdp_A 404 NNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANP 451 (495)
T ss_dssp CTTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHTTTCCCCSCG
T ss_pred cccCCccCceeeEEEecCChhhCCchhHHHHHHHHHHHhcCCCcCcCc
Confidence 234567999999999999999999999999999999998764443
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
| >1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A | Back alignment and structure |
|---|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
| >2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* | Back alignment and structure |
|---|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
| >4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* | Back alignment and structure |
|---|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
| >3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 | Back alignment and structure |
|---|
| >2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* | Back alignment and structure |
|---|
| >3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
| >1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* | Back alignment and structure |
|---|
| >3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus} | Back alignment and structure |
|---|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
| >3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} | Back alignment and structure |
|---|
| >1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1 | Back alignment and structure |
|---|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
| >3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 521 | ||||
| d1b1ya_ | 500 | c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare | 0.0 | |
| d1fa2a_ | 498 | c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea b | 0.0 | |
| d1wdpa1 | 490 | c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine m | 0.0 | |
| d1vema2 | 417 | c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus | 1e-141 |
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 500 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Score = 545 bits (1407), Expect = 0.0
Identities = 159/438 (36%), Positives = 236/438 (53%), Gaps = 26/438 (5%)
Query: 74 NGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDW 133
N V+V LP D+ + + ++ + + L AGV+GV+V+VWWG+VE P YDW
Sbjct: 4 NYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDW 63
Query: 134 RGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGR 193
Y L L GLK++A+++FHQCG GD +P+PQWV + +DPD+ Y+D G
Sbjct: 64 SAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIPIPQWVRDVGTRDPDIFYTDGHGT 123
Query: 194 RNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLL-GAIITKLMWS--------- 243
RN+EY++LG D P+ GRS +Q Y D+M +FR+ + L +I +
Sbjct: 124 RNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENMKDFLDAGVIVDIEVGLGPAGELRY 183
Query: 244 --------WRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEF 295
W +GEF CYDKY+ A A A +G EW P A PE T+F
Sbjct: 184 PSYPQSHGWSFPGIGEFICYDKYLQADFKAAAAAVGHPEW--EFPNDAGQYNDTPERTQF 241
Query: 296 FRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTP 355
FR DNG + + G FFL WYS L+ HG+RI EA +F G +V + K+ G+HW Y P
Sbjct: 242 FR-DNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKIAGVHWWYKVP 300
Query: 356 SHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQ 415
SH +ELTAGYYN RDG+ IAR+ R+ ++ +C EMRD ++ + S+PE ++Q
Sbjct: 301 SHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQPP-DAMSAPEELVQQ 359
Query: 416 LLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPS----FSFNFLRMDKNM 471
+L A + + EN+ D A+ +++ ++ + P F F +LR+ +
Sbjct: 360 VLSAGWREGLNVSCENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQL 419
Query: 472 FEYHNWVRFTRFVRQLSG 489
E N+V F FV ++
Sbjct: 420 VEGQNYVNFKTFVDRMHA 437
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 498 | Back information, alignment and structure |
|---|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} Length = 490 | Back information, alignment and structure |
|---|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Length = 417 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 521 | |||
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 100.0 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 100.0 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 100.0 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.72 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 99.29 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 98.39 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 98.34 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 98.28 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 98.23 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 98.15 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 98.14 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 98.14 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 98.1 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 98.1 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 98.03 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 97.95 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 97.92 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 97.92 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 97.92 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 97.89 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 97.74 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 97.71 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 97.65 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 97.64 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 97.63 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 97.61 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 97.55 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 97.51 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 97.46 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 97.35 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 97.34 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 97.26 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 97.26 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 97.26 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 97.25 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 97.24 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 97.19 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 97.03 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 97.01 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 97.01 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 97.0 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 96.95 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 96.5 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 96.49 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 96.3 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 96.27 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 95.94 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 95.88 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 94.3 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 93.56 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 93.41 | |
| d1twda_ | 247 | Copper homeostasis protein CutC {Shigella flexneri | 93.04 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 92.28 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 92.21 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 91.5 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 91.3 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 90.59 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 89.2 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 89.06 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 88.08 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 88.05 | |
| d1nowa1 | 353 | beta-hexosaminidase B {Human (Homo sapiens) [TaxId | 86.73 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 86.15 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 86.01 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 85.82 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 84.56 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 82.48 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 82.1 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 81.93 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 81.39 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 81.38 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 81.26 |
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=100.00 E-value=2.1e-170 Score=1328.12 Aligned_cols=426 Identities=37% Similarity=0.711 Sum_probs=409.5
Q ss_pred CCCcceEEeeecceecCCCeecCHHHHHHHHHHHHHcCCceEEEeeeeeeeecCCCcccccchHHHHHHHHHHCCCcEEE
Q 009981 73 RNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWWGVVERDRPGVYDWRGYFDLIVLASNCGLKVRA 152 (521)
Q Consensus 73 ~~~vpv~VMlPLd~v~~~~~v~~~~~~~~dL~~LK~aGVdgV~vdVwWG~VE~~~p~~Ydws~Y~~l~~mv~~~GLKv~~ 152 (521)
.++||||||||||+|+++|+|+++++++++|++||++||+|||||||||+||+++|++|||++|++|++|||++||||||
T Consensus 4 ~~yVpVyVMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~P~~YdWsgY~~l~~mvr~~GLKlq~ 83 (490)
T d1wdpa1 4 LNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQA 83 (490)
T ss_dssp TTCCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEE
T ss_pred cccccEEEEeecceecCCCcccCHHHHHHHHHHHHHcCCcEEEEeeeeeEeecCCCCccChHHHHHHHHHHHHcCCeEEE
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeccCCCCCCCCccccChhhhhhhccCCCeeeeCCCCcccccccccccCcccccCCCCchHHHHHHHHHHHHHHhHh
Q 009981 153 LLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPL 232 (521)
Q Consensus 153 vlsfHqCGGNVGDt~~ipLP~WV~~~~~k~PDI~~tD~~G~r~~EclSlg~D~~pv~~GRTpi~~Y~dfm~sF~~~fa~~ 232 (521)
|||||||||||||+|+||||+||+++++++|||+||||+|+||+||||||||++||++||||+|+|+|||+||+++|+++
T Consensus 84 vmSFHqCGGNvGD~~~IPLP~WV~~~g~~~pDi~ftDr~G~rn~E~lSl~~D~~pvl~GRTplq~Y~DFm~SFr~~F~~~ 163 (490)
T d1wdpa1 84 IMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDF 163 (490)
T ss_dssp EEECSCBCCSTTCSCCBCSCHHHHHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTHHH
T ss_pred EEeecccCCCCCcccccCCcHHHHhhhccCCCceeecCCCCcccceeeeeeccccccCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh-hhh--------cCceeecc---------CCCCccccccHHHHHHHHHHHHHhcccccCCCCCCCCCcccCCCCCCC
Q 009981 233 LGA-IIT--------KLMWSWRS---------RELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTE 294 (521)
Q Consensus 233 ~g~-vI~--------~~eWry~~---------PGiGEFQCYdk~~~~~fr~~a~~~gn~~WG~~gP~~a~~Yn~~P~~t~ 294 (521)
+++ ||+ +||+|||+ |||||||||||||+++||++|+++||++|| ||+++++||++|++|+
T Consensus 164 ~~~g~I~eI~VGlGP~GELRYPSYp~~~Gw~yPGiGEFQCYDky~~~~l~~aA~~~G~~~Wg--~P~dag~yn~~P~~t~ 241 (490)
T d1wdpa1 164 LESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAGHPEWE--LPDDAGKYNDVPESTG 241 (490)
T ss_dssp HHTTCEEEEEECCSGGGBSSCCCSCGGGTCCTTCCCCCCCCSHHHHHHHHHHHHHTTCTTCC--SCSSSCCTTCCGGGST
T ss_pred ccCCeEEEEEeccccCccccCCCCccccCCcCCCcceeeeCCHHHHHHHHHHHHHhCCcccC--CCCcCccCCCCCCCCC
Confidence 976 776 78888873 999999999999999999999999999997 6999999999999999
Q ss_pred ccccCCCCccchhhhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCceEEEEecceeccCCCCCChhhhcccccCCCCCCCh
Q 009981 295 FFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELTAGYYNTSTRDGF 374 (521)
Q Consensus 295 FF~~~~g~~~s~YGrFFL~WYs~~Li~HgdrIL~~A~~~F~~~~v~l~aKv~GIHWwy~t~SHaAElTAGyyN~~~rdGY 374 (521)
||++ +|+|+|+||||||+|||++|++||||||+.|+++|.+++|+|++|||||||||+|+||||||||||||+++||||
T Consensus 242 FF~~-~G~~~s~YGkFFL~WYs~~Ll~HgdrvL~~A~~~F~g~~v~l~aKv~GIHWwY~t~SHaAElTAGyYNt~~rDGY 320 (490)
T d1wdpa1 242 FFKS-NGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGY 320 (490)
T ss_dssp TTST-TSGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEECCCCCTTTTSTTCHHHHHHTCCCBTTBCSS
T ss_pred CCCC-CCccccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecccCCCCCChHHHhccccCCCCCccH
Confidence 9997 689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHcCcEEEEeecccccCCcCCCCCCCChHHHHHHHHHHHHHcCCCeecccCccccChHHHHHHHHhhcccCC-
Q 009981 375 LPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSE- 453 (521)
Q Consensus 375 ~~Ia~mf~r~~~~l~fTclEM~d~e~p~~~~~s~Pe~Lv~Qv~~aa~~~Gv~~~GENAl~~~d~~~~~qi~~~~~~~~~- 453 (521)
+|||+|||||+|+|+||||||+|++|| ++++|+||+||+||+++|+++||+|+|||||+|||+++|+||++++++.+.
T Consensus 321 ~~Ia~m~~rh~~~l~FTC~EM~d~eq~-~~a~s~PE~Lv~QV~~aa~~~Gv~vaGENAL~~~d~~~~~qI~~~~~~~~~~ 399 (490)
T d1wdpa1 321 RPIARMLSRHHAILNFTCLEMRDSEQP-SDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQGVN 399 (490)
T ss_dssp HHHHHHHHTTTCEEEECCTTCCGGGSC-GGGCCCHHHHHHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTTCCC
T ss_pred HHHHHHHHHcCCeEEEecccccccCCC-ccccCCHHHHHHHHHHHHHHcCCceeeeccchhcCchHHHHHHHhcccccCc
Confidence 999999999999999999999999999 699999999999999999999999999999999999999999999987642
Q ss_pred ---CCCCCcceeeEecCCccccCCcChHHHHHHHHHhhCCccccccccccCC
Q 009981 454 ---GLEKPSFSFNFLRMDKNMFEYHNWVRFTRFVRQLSGSSIFRAKLDFRGD 502 (521)
Q Consensus 454 ---~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~m~~~~~~~~~~~~~~~ 502 (521)
+...+|++||||||++.||+++||++|++|||+||++.++-++-+-.+.
T Consensus 400 ~~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~M~~~~~~~~~~~~~~~ 451 (490)
T d1wdpa1 400 NNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNH 451 (490)
T ss_dssp TTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHTTTCCCCSCGGGGTC
T ss_pred CCCCcccccceeeeecCCHhhcCcchHHHHHHHHHHhccCCCCCCChHHcCC
Confidence 3346799999999999999999999999999999999988776654443
|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} | Back information, alignment and structure |
|---|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
| >d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|