Citrus Sinensis ID: 010129

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------
MASSYRNSPVCVLLILLSCCAGCCFGFGTFGFDFHHRYSDPVKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRGLAAQGNDKTPLTFSAGNDTYRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSLRQTHPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALPIPPKSSVPPATALNPEATAGGISPASAPPIGSHSLKLHPLTCALLVMTLIASFAIF
ccccccHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEccccccEEEEEEEEcccccEEEEEEEcccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEEEEEEEEEccccccccccccEEEEccccccccccccccccEEEEcccccccHHHHHHcccccccEEEEEccccccccEEEcccccccccEEccccccccccEEEEEEEEEEccEEEcccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccccEEcccccccccccEEEEEEccccEEEEcccEEEEEEcccccEEEEEEEEcccccEEEEcEEEEEEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcc
cccHHHHHHHHHHHHHHHHHHHHHcccccEcEEEEEEccHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEEEcccccEEEEEEEccccccEEEccccccccccccccHHHHHHccccccccccEEEcccccHHccccccccccccccEEEEEEEccccccEEEEEEEEEEEEccccccccccccEEEEEEEccccHHHEccccccccccccccccHHHHHHHccccccEEEEEEccccccEEEEccccccccccccEcccccccEEEEEEEEEEEccEEEEccccEEEEccccEEccccHHHHHHHHHHcccHccccccccccccccccEEEccccccccccEEEEEEEcccEEEcccccEEEEEEccccEEEEEEEcccccEEEEEHHHEccEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHc
massyrnspVCVLLILLSCcagccfgfgtfgfdfhhrysdpvkgilavddlpkkgsfaYYSALAHRDRYFRLRgrglaaqgndktpltfsagndtyrlnSLGFLhytnvsvgqpALSFIVALdtgsdlfwlpcdcvscvhglnsssgqvidfniyspntsstsskvpcnstlcelqkqcpsagsncpyqvrylsdgtmstgFLVEDVLHLatdekqsksvdsrisfgcgrvqtgsfldgaapnglfglgmdktsvpsilanqglipnsfsmcfgsdgtgrisfgdkgspgqgetpfslrqthptynititqvsvggnavnfefsaifdsgtsftylndpaytQISETFNSLAKEkretstsdlpfeycyvlspnqtnfeypvvnltmkgggpffvndpivivssepkglYLYCLGvvksdnvniigqnfmtgynivfdreknvlgwkasdcygvnnssalpippkssvppatalnpeataggispasappigshslklhpLTCALLVMTLIASFAIF
MASSYRNSPVCVLLILLSCCAGCCFGFGTFGFDFHHRYSDPVKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRglaaqgndktpltfSAGNDTYRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATdekqsksvdsrISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSLRQTHPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALPIPPKSSVPPATALNPEATAGGISPASAPPIGSHSLKLHPLTCALLVMTLIASFAIF
MASSYRNSPVCVLLILLSccagccfgfgtfgfDFHHRYSDPVKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRGLAAQGNDKTPLTFSAGNDTYRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSLRQTHPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALPIPPKSSVPPATALNPEATAGGISPASAPPIGSHSLKLHPLTCALLVMTLIASFAIF
********PVCVLLILLSCCAGCCFGFGTFGFDFHHRYSDPVKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRGLAAQGNDKTPLTFSAGNDTYRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIY*****************C*****C**AGSNCPYQVRYLSDGTMSTGFLVEDVLHLAT*********SRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGT**********************THPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPAYTQISETFN************DLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVN****************************************LKLHPLTCALLVMTLIASFAI*
****YRN*PVCVLLILLSCCAGCCFGFGTFGFDFHHRYS***********************************************************NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLN*****VIDFNIYSPNTSSTSSKVPCNS***************CPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSLRQTHPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSL**********DLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASD*************************************************PLTCALLVMTLIASFAIF
********PVCVLLILLSCCAGCCFGFGTFGFDFHHRYSDPVKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRGLAAQGNDKTPLTFSAGNDTYRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPN**********NSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSLRQTHPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNS**********SDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALPIPPKSSVPPATALNPEATAGGISPASAPPIGSHSLKLHPLTCALLVMTLIASFAIF
*ASSYRNSPVCVLLILLSCCAGCCFGFGTFGFDFHHRYSDPVKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRGLAAQ**DKTPLTFSAGNDTYRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSLRQTHPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYG******************************************LKLHPLTCALLVMTLIASFAIF
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHi
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASSYRNSPVCVLLILLSCCAGCCFGFGTFGFDFHHRYSDPVKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRGLAAQGNDKTPLTFSAGNDTYRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSLRQTHPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALPIPPKSSVPPATALNPEATAGGISPASAPPIGSHSLKLHPLTCALLVMTLIASFAIF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query517 2.2.26 [Sep-21-2011]
Q9LX20528 Aspartic proteinase-like no no 0.843 0.825 0.371 2e-74
Q9S9K4475 Aspartic proteinase-like no no 0.653 0.711 0.281 2e-26
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.649 0.819 0.244 4e-19
Q0IU52410 Aspartic proteinase Asp1 no no 0.628 0.792 0.245 1e-18
Q766C2438 Aspartic proteinase nepen N/A no 0.731 0.863 0.244 5e-18
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.622 0.644 0.263 1e-17
Q6XBF8437 Aspartic proteinase CDR1 no no 0.607 0.718 0.261 2e-16
Q766C3437 Aspartic proteinase nepen N/A no 0.740 0.876 0.254 2e-15
C4YSF6391 Candidapepsin-1 OS=Candid N/A no 0.589 0.780 0.234 2e-11
P0CY27391 Candidapepsin-1 OS=Candid N/A no 0.589 0.780 0.234 2e-11
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function desciption
 Score =  280 bits (716), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 178/479 (37%), Positives = 250/479 (52%), Gaps = 43/479 (8%)

Query: 36  HRYSDP----VKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRGLAAQGNDKTP----L 87
           HR+SD     +K   + D LP K S  YY  LA  D  FR +   L A+     P     
Sbjct: 31  HRFSDEGRASIKTPSSSDSLPNKQSLEYYRLLAESD--FRRQRMNLGAKVQSLVPSEGSK 88

Query: 88  TFSAGNDTYRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNS--S 145
           T S+GND       G+LHYT + +G P++SF+VALDTGS+L W+PC+CV C    ++  S
Sbjct: 89  TISSGND------FGWLHYTWIDIGTPSVSFLVALDTGSNLLWIPCNCVQCAPLTSTYYS 142

Query: 146 SGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVE 205
           S    D N Y+P++SSTS    C+  LC+    C S    CPY V YLS  T S+G LVE
Sbjct: 143 SLATKDLNEYNPSSSSTSKVFLCSHKLCDSASDCESPKEQCPYTVNYLSGNTSSSGLLVE 202

Query: 206 DVLHLATDEKQ-----SKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILA 260
           D+LHL  +        S SV +R+  GCG+ Q+G +LDG AP+GL GLG  + SVPS L+
Sbjct: 203 DILHLTYNTNNRLMNGSSSVKARVVIGCGKKQSGDYLDGVAPDGLMGLGPAEISVPSFLS 262

Query: 261 NQGLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSL--RQTHPTYNITITQVSVGGNA 318
             GL+ NSFS+CF  + +GRI FGD G   Q  TPF       +  Y + +    +G + 
Sbjct: 263 KAGLMRNSFSLCFDEEDSGRIYFGDMGPSIQQSTPFLQLDNNKYSGYIVGVEACCIGNSC 322

Query: 319 V-NFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSD----LPFEYCYVLSP 373
           +    F+   DSG SFTYL +  Y ++     +L  ++   +TS     + +EYCY  S 
Sbjct: 323 LKQTSFTTFIDSGQSFTYLPEEIYRKV-----ALEIDRHINATSKNFEGVSWEYCYESSA 377

Query: 374 NQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKS--DNVNIIGQNFMT 431
                + P + L       F ++ P+ +   + +GL  +CL +  S  + +  IGQN+M 
Sbjct: 378 EP---KVPAIKLKFSHNNTFVIHKPLFVF-QQSQGLVQFCLPISPSGQEGIGSIGQNYMR 433

Query: 432 GYNIVFDREKNVLGWKASDCYGVNNSSALPIPPKSSVPPATALNPEATAGG--ISPASA 488
           GY +VFDRE   LGW  S C           P  +S P     + + + GG  +SPA A
Sbjct: 434 GYRMVFDRENMKLGWSPSKCQEDKIEPPQASPGSTSSPNPLPTDEQQSRGGHAVSPAIA 492

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|C4YSF6|CARP1_CANAW Candidapepsin-1 OS=Candida albicans (strain WO-1) GN=SAP1 PE=1 SV=1 Back     alignment and function description
>sp|P0CY27|CARP1_CANAL Candidapepsin-1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SAP1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query517
255586856533 Aspartic proteinase nepenthesin-1 precur 0.943 0.915 0.648 0.0
356540838 829 PREDICTED: peroxidase [Glycine max] 0.920 0.574 0.611 1e-164
356559246516 PREDICTED: aspartic proteinase-like prot 0.932 0.934 0.588 1e-162
356496606508 PREDICTED: aspartic proteinase-like prot 0.930 0.946 0.608 1e-160
357483911527 Aspartic proteinase-like protein [Medica 0.932 0.914 0.579 1e-157
312282765515 unnamed protein product [Thellungiella h 0.839 0.842 0.612 1e-157
357517935544 Aspartic proteinase-like protein [Medica 0.874 0.830 0.580 1e-155
30680102513 aspartyl protease-like protein [Arabidop 0.814 0.820 0.617 1e-154
297832400513 aspartyl protease family protein [Arabid 0.814 0.820 0.615 1e-153
449456843547 PREDICTED: aspartic proteinase-like prot 0.866 0.819 0.572 1e-151
>gi|255586856|ref|XP_002534038.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223525945|gb|EEF28342.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/501 (64%), Positives = 388/501 (77%), Gaps = 13/501 (2%)

Query: 25  FGFGTFGFDFHHRYSDPVKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRGLAAQGNDK 84
           +GFGTFGFD HHRYSDPVKG+L+VDDLP+KGS  YY+++AHRD    + GR L +  N  
Sbjct: 36  YGFGTFGFDLHHRYSDPVKGMLSVDDLPEKGSLHYYASMAHRD--ILIHGRKLVSD-NTS 92

Query: 85  TPLTFSAGNDTYRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVS--CVHGL 142
           TPLTF +GN+TYR +SLGFLHY NVS+G P+LS++VALDTGSDLFWLPCDC +  CV GL
Sbjct: 93  TPLTFFSGNETYRFSSLGFLHYANVSIGTPSLSYLVALDTGSDLFWLPCDCTNSGCVQGL 152

Query: 143 NSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGF 202
              SG+ IDFNIY PN SSTS  +PCN+TLC  Q +CPSA S CPYQV+YLS+GT STG 
Sbjct: 153 QFPSGEQIDFNIYRPNASSTSQTIPCNNTLCSRQSRCPSAQSTCPYQVQYLSNGTSSTGV 212

Query: 203 LVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQ 262
           LVED+LHL TD+ QS+++D++I FGCGRVQTGSFLDGAAPNGLFGLGM   SVPS LA +
Sbjct: 213 LVEDLLHLTTDDAQSRALDAKIIFGCGRVQTGSFLDGAAPNGLFGLGMTNISVPSTLARE 272

Query: 263 GLIPNSFSMCFGSDGTGRISFGDKGSPGQGETPFSLRQTHPTYNITITQVSVGGNAVNFE 322
           G   NSFSMCFG DG GRISFGD GS GQGETPF+LRQ HPTYN++IT+++VGG   + E
Sbjct: 273 GYTSNSFSMCFGRDGIGRISFGDTGSSGQGETPFNLRQLHPTYNVSITKINVGGRDADLE 332

Query: 323 FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPV 382
           FSAIFDSGTSFTYLNDPAYT ISE+FN  AKEKR +S SD+PFEYCY +S NQTN E P 
Sbjct: 333 FSAIFDSGTSFTYLNDPAYTLISESFNIGAKEKRYSSISDIPFEYCYEMSSNQTNLEIPT 392

Query: 383 VNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKN 442
           VNL M+GG  F V DPIVIV  +  G  +YCL +VKS +VNIIGQNFMTGY IVF+RE+N
Sbjct: 393 VNLVMQGGSQFNVTDPIVIVILQ-GGASIYCLAIVKSGDVNIIGQNFMTGYRIVFNRERN 451

Query: 443 VLGWKASDCYGVNNSSALPIPPKS-SVPPATALNPEATAGGISPASA----PPIGSHSLK 497
           VLGWKASDCY   +++  P+ P S  +PPATA+NP+ATAG  +        PP+G+++ K
Sbjct: 452 VLGWKASDCYDDMDTTTFPVDPISPGIPPATAVNPQATAGSGNTTEVSGTPPPVGNNAPK 511

Query: 498 LHPLTCAL--LVMTLIASFAI 516
           L  L      ++M LI  F I
Sbjct: 512 LPKLNSLTFAIIMVLIPFFTI 532

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356540838|ref|XP_003538891.1| PREDICTED: peroxidase [Glycine max] Back     alignment and taxonomy information
>gi|356559246|ref|XP_003547911.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356496606|ref|XP_003517157.1| PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357483911|ref|XP_003612242.1| Aspartic proteinase-like protein [Medicago truncatula] gi|355513577|gb|AES95200.1| Aspartic proteinase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|312282765|dbj|BAJ34248.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|357517935|ref|XP_003629256.1| Aspartic proteinase-like protein [Medicago truncatula] gi|355523278|gb|AET03732.1| Aspartic proteinase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|30680102|ref|NP_849967.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|17978947|gb|AAL47439.1| putative chloroplast nucleoid DNA-binding protein [Arabidopsis thaliana] gi|22655368|gb|AAM98276.1| At2g17760/At2g17760 [Arabidopsis thaliana] gi|330251585|gb|AEC06679.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297832400|ref|XP_002884082.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297329922|gb|EFH60341.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449456843|ref|XP_004146158.1| PREDICTED: aspartic proteinase-like protein 1-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query517
TAIR|locus:2827921513 AT2G17760 [Arabidopsis thalian 0.852 0.859 0.609 3.3e-150
TAIR|locus:2125324524 AT4G35880 [Arabidopsis thalian 0.839 0.828 0.525 3.4e-125
TAIR|locus:2080903529 AT3G51330 [Arabidopsis thalian 0.878 0.858 0.5 1.5e-119
TAIR|locus:2080913528 AT3G51350 [Arabidopsis thalian 0.899 0.880 0.446 1.2e-108
TAIR|locus:2080973488 AT3G51360 [Arabidopsis thalian 0.880 0.932 0.439 5.3e-104
TAIR|locus:2080908530 AT3G51340 [Arabidopsis thalian 0.924 0.901 0.437 6e-103
TAIR|locus:2184138528 AT5G10080 [Arabidopsis thalian 0.856 0.839 0.375 6.5e-74
TAIR|locus:2172661493 AT5G22850 [Arabidopsis thalian 0.709 0.744 0.307 1.4e-39
TAIR|locus:2040545512 AT2G36670 [Arabidopsis thalian 0.744 0.751 0.296 1.3e-36
TAIR|locus:2200023492 AT1G08210 [Arabidopsis thalian 0.669 0.703 0.284 1.7e-34
TAIR|locus:2827921 AT2G17760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1466 (521.1 bits), Expect = 3.3e-150, P = 3.3e-150
 Identities = 275/451 (60%), Positives = 348/451 (77%)

Query:    33 DFHHRYSDPVKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRGLAAQGNDKTPLTFSAG 92
             +FHHR+SD V G+L  D LP + S  YY  +AHRDR   +RGR LA +  D++ +TFS G
Sbjct:    36 EFHHRFSDQVVGVLPGDGLPNRDSSKYYRVMAHRDRL--IRGRRLANE--DQSLVTFSDG 91

Query:    93 NDTYRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDF 152
             N+T R+++LGFLHY NV+VG P+  F+VALDTGSDLFWLPCDC +CV  L +  G  +D 
Sbjct:    92 NETVRVDALGFLHYANVTVGTPSDWFMVALDTGSDLFWLPCDCTNCVRELKAPGGSSLDL 151

Query:   153 NIYSPNTSSTSSKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLAT 212
             NIYSPN SSTS+KVPCNSTLC    +C S  S+CPYQ+RYLS+GT STG LVEDVLHL +
Sbjct:   152 NIYSPNASSTSTKVPCNSTLCTRGDRCASPESDCPYQIRYLSNGTSSTGVLVEDVLHLVS 211

Query:   213 DEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMC 272
             ++K SK++ +R++FGCG+VQTG F DGAAPNGLFGLG++  SVPS+LA +G+  NSFSMC
Sbjct:   212 NDKSSKAIPARVTFGCGQVQTGVFHDGAAPNGLFGLGLEDISVPSVLAKEGIAANSFSMC 271

Query:   273 FGSDGTGRISFGDKGSPGQGETPFSLRQTHPTYNITITQVSVGGNAVNFEFSAIFDSGTS 332
             FG+DG GRISFGDKGS  Q ETP ++RQ HPTYNIT+T++SVGGN  + EF A+FDSGTS
Sbjct:   272 FGNDGAGRISFGDKGSVDQRETPLNIRQPHPTYNITVTKISVGGNTGDLEFDAVFDSGTS 331

Query:   333 FTYLNDPAYTQISETFNSLAKEKR-ETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGG 391
             FTYL D AYT ISE+FNSLA +KR +T+ S+LPFEYCY LSPN+ +F+YP VNLTMKGG 
Sbjct:   332 FTYLTDAAYTLISESFNSLALDKRYQTTDSELPFEYCYALSPNKDSFQYPAVNLTMKGGS 391

Query:   392 PFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDC 451
              + V  P+V++    K   +YCL ++K ++++IIGQNFMTGY +VFDREK +LGWK SDC
Sbjct:   392 SYPVYHPLVVIPM--KDTDVYCLAIMKIEDISIIGQNFMTGYRVVFDREKLILGWKESDC 449

Query:   452 Y-GVNNSSALPIPPKSSV--PPATALNPEAT 479
             Y G  ++  LP    SS   PPA++ +PEAT
Sbjct:   450 YTGETSARTLPSNRSSSSARPPASSFDPEAT 480
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0031225 "anchored to membrane" evidence=TAS
GO:0006865 "amino acid transport" evidence=RCA
TAIR|locus:2125324 AT4G35880 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080903 AT3G51330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080913 AT3G51350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080973 AT3G51360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080908 AT3G51340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184138 AT5G10080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172661 AT5G22850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040545 AT2G36670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200023 AT1G08210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691
3rd Layer3.4.23.35LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT2G17760
aspartyl protease family protein; aspartyl protease family protein; FUNCTIONS IN- aspartic-type endopeptidase activity; INVOLVED IN- proteolysis; LOCATED IN- anchored to membrane; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Peptidase aspartic, catalytic (InterPro-IPR009007), Peptidase A1 (InterPro-IPR001461), Peptidase aspartic, active site (InterPro-IPR001969); BEST Arabidopsis thaliana protein match is- aspartyl protease family protein (TAIR-AT4G35880.1); Has 1616 Blast hits to 1610 proteins in 172 species- Archae - 0; Bacteria - [...] (513 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT5G48380
leucine-rich repeat family protein / protein kinase family protein; leucine-rich repeat family [...] (620 aa)
   •  • 0.588
MES12
MES12 (METHYL ESTERASE 12); hydrolase; Encodes a protein predicted to act as a carboxylesterase [...] (349 aa)
      • 0.567
AT3G29375
XH domain-containing protein; XH domain-containing protein; FUNCTIONS IN- molecular_function un [...] (335 aa)
      • 0.534
AT1G53280
DJ-1 family protein; DJ-1 family protein; INVOLVED IN- biological_process unknown; LOCATED IN- [...] (438 aa)
      • 0.534
PER55
peroxidase, putative; peroxidase, putative; FUNCTIONS IN- electron carrier activity, peroxidase [...] (330 aa)
      • 0.506
AT3G50940
AAA-type ATPase family protein; AAA-type ATPase family protein; FUNCTIONS IN- nucleoside-tripho [...] (451 aa)
      • 0.463
WIP1
WIP1 (WPP-DOMAIN INTERACTING PROTEIN 1); protein heterodimerization/ protein homodimerization; [...] (489 aa)
    •   0.462
AT4G26450
unknown protein; unknown protein; Has 2630 Blast hits to 1931 proteins in 274 species- Archae - [...] (708 aa)
    •   0.462
AT2G23060
GCN5-related N-acetyltransferase (GNAT) family protein; GCN5-related N-acetyltransferase (GNAT) [...] (413 aa)
      • 0.438
AT1G76570
chlorophyll A-B binding family protein; chlorophyll A-B binding family protein; FUNCTIONS IN- c [...] (327 aa)
      • 0.423

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query517
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 4e-40
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 6e-34
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 3e-33
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 6e-25
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 4e-21
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 4e-20
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 7e-15
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 8e-12
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 9e-12
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 1e-09
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 2e-05
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 6e-05
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 2e-04
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 2e-04
PTZ00013450 PTZ00013, PTZ00013, plasmepsin 4 (PM4); Provisiona 0.001
PTZ00147453 PTZ00147, PTZ00147, plasmepsin-1; Provisional 0.002
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  145 bits (368), Expect = 4e-40
 Identities = 82/368 (22%), Positives = 117/368 (31%), Gaps = 125/368 (33%)

Query: 105 HYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSS 164
           +   +S+G P   F + +DTGSDL W  C                               
Sbjct: 2   YLVTLSIGTPPQPFSLIVDTGSDLTWTQC------------------------------- 30

Query: 165 KVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRI 224
                                C Y+  Y  DG+ ++G L  +                 +
Sbjct: 31  ---------------------CSYEYSY-GDGSSTSGVLATETFTFGDSSVSV----PNV 64

Query: 225 SFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSD----GTGR 280
           +FGCG    G    GA   G+ GLG    S+ S L   G   N FS C        G+  
Sbjct: 65  AFGCGTDNEGGSFGGAD--GILGLGRGPLSLVSQL---GSTGNKFSYCLVPHDDTGGSSP 119

Query: 281 ISFGD---KGSPGQGETPFSLRQTHPT-YNITITQVSVGGNAVNFEFSA----------- 325
           +  GD    G  G   TP      +PT Y + +  +SVGG  +    S            
Sbjct: 120 LILGDAADLGGSGVVYTPLVKNPANPTYYYVNLEGISVGGKRLPIPPSVFAIDSDGSGGT 179

Query: 326 IFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNL 385
           I DSGT+ TYL DPA                                       YP + L
Sbjct: 180 IIDSGTTLTYLPDPA---------------------------------------YPDLTL 200

Query: 386 TMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKS--DNVNIIGQNFMTGYNIVFDREKNV 443
              GG    +      V        + CL ++ S    V+I+G      + + +D E + 
Sbjct: 201 HFDGGADLELPPENYFVDVGEG---VVCLAILSSSSGGVSILGNIQQQNFLVEYDLENSR 257

Query: 444 LGWKASDC 451
           LG+  +DC
Sbjct: 258 LGFAPADC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|140051 PTZ00013, PTZ00013, plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>gnl|CDD|140176 PTZ00147, PTZ00147, plasmepsin-1; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 517
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.91
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.87
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.64
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 95.07
PF1365090 Asp_protease_2: Aspartyl protease 94.82
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.97
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.45
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 92.04
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 91.36
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 87.89
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 87.56
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 85.75
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 83.49
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 82.16
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.6e-65  Score=536.15  Aligned_cols=392  Identities=25%  Similarity=0.459  Sum_probs=310.1

Q ss_pred             cccCCceeEEEEEeccCCccccccccCCCCCCCCHHHHHHHHhcChhHhHHHhhhhccCCCCCceeecCCCceeecccCC
Q 010129           23 CCFGFGTFGFDFHHRYSDPVKGILAVDDLPKKGSFAYYSALAHRDRYFRLRGRGLAAQGNDKTPLTFSAGNDTYRLNSLG  102 (517)
Q Consensus        23 ~~~~~~~~~~~l~h~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~d~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  102 (517)
                      ......+++++|+||+++     ++|...+.....++++++++||+   +|++++........++.  .     .+...+
T Consensus        18 ~~~~~~~~~~~l~h~~~~-----~sp~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~~~--~-----~~~~~~   82 (431)
T PLN03146         18 AEAPKGGFTVDLIHRDSP-----KSPFYNPSETPSQRLRNAFRRSI---SRVNHFRPTDASPNDPQ--S-----DLISNG   82 (431)
T ss_pred             ccccCCceEEEEEeCCCC-----CCCCCCCCCChhHHHHHHHHHHH---HHHHHHhhccccCCccc--c-----CcccCC
Confidence            334567899999999987     33333345566788999999999   56666643111111111  1     111345


Q ss_pred             ceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCC---C
Q 010129          103 FLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQK---Q  178 (517)
Q Consensus       103 ~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~---~  178 (517)
                      ..|+++|.||||||++.|++||||+++||+|. |..|..+.         ++.|||++|+||+.++|+++.|+...   .
T Consensus        83 ~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~---------~~~fdps~SST~~~~~C~s~~C~~~~~~~~  153 (431)
T PLN03146         83 GEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQV---------SPLFDPKKSSTYKDVSCDSSQCQALGNQAS  153 (431)
T ss_pred             ccEEEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCC---------CCcccCCCCCCCcccCCCCcccccCCCCCC
Confidence            68999999999999999999999999999999 99998654         28899999999999999999998642   3


Q ss_pred             CCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCCChhHH
Q 010129          179 CPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSI  258 (517)
Q Consensus       179 C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~S~~~q  258 (517)
                      |... +.|.|.+.| +|++.+.|++++|+|+|++..+. ...++++.|||++.+.|.|..  ..+||||||++.+|+++|
T Consensus       154 c~~~-~~c~y~i~Y-gdgs~~~G~l~~Dtltlg~~~~~-~~~v~~~~FGc~~~~~g~f~~--~~~GilGLG~~~~Sl~sq  228 (431)
T PLN03146        154 CSDE-NTCTYSYSY-GDGSFTKGNLAVETLTIGSTSGR-PVSFPGIVFGCGHNNGGTFDE--KGSGIVGLGGGPLSLISQ  228 (431)
T ss_pred             CCCC-CCCeeEEEe-CCCCceeeEEEEEEEEeccCCCC-cceeCCEEEeCCCCCCCCccC--CCceeEecCCCCccHHHH
Confidence            7543 469999999 78888999999999999864321 356889999999988876532  358999999999999999


Q ss_pred             HhhcCCCCceeEEeeCC-----CCCeeEEeCCCCCC---CCceecceeCCCCCeEEEEEeEEEeCCeeeecc--------
Q 010129          259 LANQGLIPNSFSMCFGS-----DGTGRISFGDKGSP---GQGETPFSLRQTHPTYNITITQVSVGGNAVNFE--------  322 (517)
Q Consensus       259 l~~~g~i~~~FS~~l~~-----~~~G~L~fGg~d~~---~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~--------  322 (517)
                      |...  +.++|||||.+     ...|.|+||+....   ...+||++......+|.|+|++|+||++.+.++        
T Consensus       229 l~~~--~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~  306 (431)
T PLN03146        229 LGSS--IGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVE  306 (431)
T ss_pred             hhHh--hCCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCC
Confidence            9753  45699999975     23799999985321   367789886544578999999999999988753        


Q ss_pred             -CcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeE
Q 010129          323 -FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVI  401 (517)
Q Consensus       323 -~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~  401 (517)
                       ..+||||||++++||+++|++|+++|.+++...... .....++.||+...   ...+|+|+|+| +|+++.|++.+|+
T Consensus       307 ~g~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~-~~~~~~~~C~~~~~---~~~~P~i~~~F-~Ga~~~l~~~~~~  381 (431)
T PLN03146        307 EGNIIIDSGTTLTLLPSDFYSELESAVEEAIGGERVS-DPQGLLSLCYSSTS---DIKLPIITAHF-TGADVKLQPLNTF  381 (431)
T ss_pred             CCcEEEeCCccceecCHHHHHHHHHHHHHHhccccCC-CCCCCCCccccCCC---CCCCCeEEEEE-CCCeeecCcceeE
Confidence             268999999999999999999999999988653321 22334678998532   25789999999 6899999988887


Q ss_pred             EEeCCCCeeEEEEEEEeCCCceeechhhhceeEEEEeCCCCEEEEEecCCCC
Q 010129          402 VSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYG  453 (517)
Q Consensus       402 ~~~~~~~~~~~Cl~~~~~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~  453 (517)
                      +....+   .+|+++....+.||||+.|||++|+|||++++|||||+.+|.+
T Consensus       382 ~~~~~~---~~Cl~~~~~~~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~  430 (431)
T PLN03146        382 VKVSED---LVCFAMIPTSSIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK  430 (431)
T ss_pred             EEcCCC---cEEEEEecCCCceEECeeeEeeEEEEEECCCCEEeeecCCcCc
Confidence            765443   5799988776689999999999999999999999999999975

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query517
2qzw_A341 Secreted Aspartic Proteinase (Sap) 1 From Candida A 4e-12
2h6s_A340 Secreted Aspartic Proteinase (sap) 3 From Candida A 8e-10
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 6e-07
1eag_A342 Secreted Aspartic Proteinase (Sap2) From Candida Al 6e-07
1zap_A342 Secreted Aspartic Protease From C. Albicans Length 1e-06
1ls5_A328 Crystal Structure Of Plasmepsin Iv From P. Falcipar 2e-06
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 4e-05
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 5e-04
2qzx_A342 Secreted Aspartic Proteinase (Sap) 5 From Candida A 5e-04
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 6e-04
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 7e-04
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 8e-04
>pdb|2QZW|A Chain A, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans Length = 341 Back     alignment and structure 
Iteration: 1

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 149/392 (38%), Gaps = 87/392 (22%)
Query: 98  LNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDF----N 153
           LN+    +  ++++G     F V +DTGS   W+P   V+C        GQ  DF     
Sbjct: 7   LNNEHVSYAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDK---PRPGQSADFCKGKG 63
Query: 154 IYSPNTSSTSSKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATD 213
           IY+P +S+TS  +                    P+ + Y  DG+ S G L +D       
Sbjct: 64  IYTPKSSTTSQNL------------------GTPFYIGY-GDGSSSQGTLYKDT------ 98
Query: 214 EKQSKSVDSRISFGCGRVQTGSFLD---GAAPNGLFGLGM-------DKTSVPSILANQG 263
                     + FG   +    F D    + P G+ G+G        D  +VP  L NQG
Sbjct: 99  ----------VGFGGASITKQVFADITKTSIPQGILGIGYKTNEAAGDYDNVPVTLKNQG 148
Query: 264 LI-PNSFSMCFGS--DGTGRISFGDKGSPGQGETPFSLRQTHP-TYNITITQVSVGGNAV 319
           +I  N++S+   S    TG+I FG         +  ++  T      IT+  +   G  +
Sbjct: 149 VIAKNAYSLYLNSPNAATGQIIFGGVDKAKYSGSLIAVPVTSDRELRITLNSLKAVGKNI 208
Query: 320 NFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEK-----------RETSTSDLPFEYC 368
           N     + DSGT+ TYL       I + F +  K             + + T D  F+  
Sbjct: 209 NGNIDVLLDSGTTITYLQQDVAQDIIDAFQAELKSDGQGHTFYVTDCQTSGTVDFNFDNN 268
Query: 369 YVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQN 428
             +S   + F  P   L+   G P+            PK     C  ++   + NI+G N
Sbjct: 269 AKISVPASEFTAP---LSYANGQPY------------PK-----CQLLLGISDANILGDN 308
Query: 429 FMTGYNIVFDREKNVLGWKASDCYGVNNSSAL 460
           F+    +V+D + + +          +N +AL
Sbjct: 309 FLRSAYLVYDLDDDKISLAQVKYTSASNIAAL 340
>pdb|2H6S|A Chain A, Secreted Aspartic Proteinase (sap) 3 From Candida Albicans Length = 340 Back     alignment and structure
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure
>pdb|1EAG|A Chain A, Secreted Aspartic Proteinase (Sap2) From Candida Albicans Complexed With A70450 Length = 342 Back     alignment and structure
>pdb|1ZAP|A Chain A, Secreted Aspartic Protease From C. Albicans Length = 342 Back     alignment and structure
>pdb|1LS5|A Chain A, Crystal Structure Of Plasmepsin Iv From P. Falciparum In Complex With Pepstatin A Length = 328 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|2QZX|A Chain A, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans Length = 342 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query517
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 5e-63
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 9e-60
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 2e-57
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 9e-28
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 1e-26
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 4e-26
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 4e-26
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 6e-24
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 1e-23
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 6e-23
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 3e-21
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 2e-20
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 4e-20
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 1e-19
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 1e-19
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 2e-19
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 4e-19
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 4e-19
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 1e-18
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 1e-18
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 2e-18
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 4e-18
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-17
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 2e-17
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 2e-16
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 2e-16
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 2e-16
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 9e-16
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 1e-15
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 2e-15
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 2e-14
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 2e-13
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 2e-06
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  210 bits (535), Expect = 5e-63
 Identities = 61/390 (15%), Positives = 124/390 (31%), Gaps = 50/390 (12%)

Query: 104 LHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSST 162
           LH+ N+    P +   V +D   +  W+ C+   S                       S 
Sbjct: 22  LHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKT---------YQAPFCHSTQCSR 72

Query: 163 SSKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDS 222
           ++   C S     +  C    + C              G L EDVL +   +  ++ +  
Sbjct: 73  ANTHQCLSCPAASRPGC--HKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGP 130

Query: 223 -----RISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGS-- 275
                +  F C               G+ GLG    S+P+ LA+   +   F+ C     
Sbjct: 131 LVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYP 190

Query: 276 DGTGRISFGDKGSPGQGETPFSLRQT----------HPTYNITITQVSVGGNAV------ 319
              G I FGD  +  +      +                YN+ +  + +  ++V      
Sbjct: 191 TSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKI 250

Query: 320 ------NFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSP 373
                 +     +  + T    L    Y   ++ F     ++ +  +   PF  C+  + 
Sbjct: 251 SSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVA-PFGLCFNSNK 309

Query: 374 NQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSDN----VNIIGQNF 429
               +    + +    G  + ++   ++V ++P    + CLGV+           +G   
Sbjct: 310 INA-YPSVDLVMDKPNGPVWRISGEDLMVQAQP---GVTCLGVMNGGMQPRAEITLGARQ 365

Query: 430 MTGYNIVFDREKNVLGWKASDCYGVNNSSA 459
           +    +VFD  ++ +G+  S  +      A
Sbjct: 366 LEENLVVFDLARSRVGFSTSSLHSHGVKCA 395
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query517
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.86
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.48
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 92.28
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 90.83
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 90.33
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 84.67
2hs1_A99 HIV-1 protease; ultra-high resolution active site 84.37
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 80.43
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=1.9e-57  Score=473.29  Aligned_cols=326  Identities=21%  Similarity=0.358  Sum_probs=262.9

Q ss_pred             ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCC-
Q 010129           99 NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQK-  177 (517)
Q Consensus        99 ~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~-  177 (517)
                      +..+.+|+++|.||||||+|.|++||||+++||+|.  .|                   .+|+||+.++|+++.|...+ 
T Consensus        16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~--~c-------------------~~Sst~~~v~C~s~~C~~~~~   74 (413)
T 3vla_A           16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD--QN-------------------YVSSTYRPVRCRTSQCSLSGS   74 (413)
T ss_dssp             CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--SS-------------------CCCTTCEECBTTSHHHHHTTC
T ss_pred             cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC--CC-------------------CCCCCcCccCCCccccccccc
Confidence            455678999999999999999999999999999997  33                   27999999999999998642 


Q ss_pred             -CC---CC------CCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCc---cceecceeeeeeeeeccCCCCCCCCCce
Q 010129          178 -QC---PS------AGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQ---SKSVDSRISFGCGRVQTGSFLDGAAPNG  244 (517)
Q Consensus       178 -~C---~~------~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~---~~~~~~~~~fG~~~~~~g~~~~~~~~dG  244 (517)
                       .|   .+      .++.|.|.+.|+.|++.+.|++++|+|+|+..++.   ..+.++++.|||++.+.+... ....||
T Consensus        75 ~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~-~~~~dG  153 (413)
T 3vla_A           75 IACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL-ASGVVG  153 (413)
T ss_dssp             CEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS-CTTCCE
T ss_pred             CCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc-cccccc
Confidence             23   21      13569999999557899999999999999854322   136788999999998632211 135689


Q ss_pred             eEeeCCCCCChhHHHhhcCCCCceeEEeeCC--CCCeeEEeCCCCCC---------C-CceecceeCCCC----------
Q 010129          245 LFGLGMDKTSVPSILANQGLIPNSFSMCFGS--DGTGRISFGDKGSP---------G-QGETPFSLRQTH----------  302 (517)
Q Consensus       245 ilGLg~~~~S~~~ql~~~g~i~~~FS~~l~~--~~~G~L~fGg~d~~---------~-~~~tp~~~~~~~----------  302 (517)
                      |||||++.+|+++||+++++++++|||||.+  +..|.|+||+.|..         . +.+||++..+..          
T Consensus       154 IlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~  233 (413)
T 3vla_A          154 MAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEP  233 (413)
T ss_dssp             EEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCC
T ss_pred             ccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCC
Confidence            9999999999999999998889999999998  45799999998752         3 788898876432          


Q ss_pred             -CeEEEEEeEEEeCCeeeecc-----------CcEEEeccccceeecHHHHHHHHHHHHHhhhccccc-CCCCCCccccc
Q 010129          303 -PTYNITITQVSVGGNAVNFE-----------FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRET-STSDLPFEYCY  369 (517)
Q Consensus       303 -~~y~v~l~~i~vg~~~~~~~-----------~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~C~  369 (517)
                       .+|.|+|++|+||++.+.++           .++||||||++++||+++|++|.++|.+++...... .....+++.||
T Consensus       234 ~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~  313 (413)
T 3vla_A          234 SVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACF  313 (413)
T ss_dssp             CCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEE
T ss_pred             CceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCccee
Confidence             58999999999999998764           479999999999999999999999999987521111 11133578899


Q ss_pred             ccCCCC---CCCCCCeEEEEEcC-CccEEEcCCeeEEEeCCCCeeEEEEEEEeCC----CceeechhhhceeEEEEeCCC
Q 010129          370 VLSPNQ---TNFEYPVVNLTMKG-GGPFFVNDPIVIVSSEPKGLYLYCLGVVKSD----NVNIIGQNFMTGYNIVFDREK  441 (517)
Q Consensus       370 ~~~~~~---~~~~~P~i~~~f~g-g~~~~l~~~~~~~~~~~~~~~~~Cl~~~~~~----~~~IlG~~fl~~~yvvfD~~~  441 (517)
                      +.++..   ....+|+|+|+|+| ++.|+|++++|++...+ +  .+|++++...    +.||||+.|||++|+|||+++
T Consensus       314 ~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~-~--~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~  390 (413)
T 3vla_A          314 STDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND-N--VVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLAT  390 (413)
T ss_dssp             ECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET-T--EEEECEEEEESSCSSSEEECHHHHTTEEEEEETTT
T ss_pred             ccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC-C--cEEEEEEecCCCcccceeEehhhhcCeEEEEECCC
Confidence            986421   12479999999954 38999998888776443 3  6799887653    489999999999999999999


Q ss_pred             CEEEEEec
Q 010129          442 NVLGWKAS  449 (517)
Q Consensus       442 ~~iGfa~~  449 (517)
                      +|||||++
T Consensus       391 ~riGfa~~  398 (413)
T 3vla_A          391 SRVGFSGT  398 (413)
T ss_dssp             TEEEEEEE
T ss_pred             CEEEEEEe
Confidence            99999984
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 517
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 1e-36
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 4e-32
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 2e-30
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 4e-28
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 2e-27
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 3e-27
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 6e-26
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 3e-24
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 3e-24
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 4e-24
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 8e-24
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 1e-23
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 1e-23
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 1e-23
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 1e-22
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 1e-22
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 2e-22
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 3e-22
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 3e-22
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 7e-21
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 1e-19
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 9e-17
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  137 bits (345), Expect = 1e-36
 Identities = 63/376 (16%), Positives = 111/376 (29%), Gaps = 54/376 (14%)

Query: 104 LHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTS 163
           L+      G       + LD    L W  CD               I  +  +   ++  
Sbjct: 15  LYTIPFHDGAS-----LVLDVAGPLVWSTCD--------GGQPPAEIPCSSPTCLLANAY 61

Query: 164 SKVPCNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLA--TDEKQSKSVD 221
               C +  C              Y    +  G  + G L             K    V+
Sbjct: 62  PAPGCPAPSC---GSDKHDKPCTAYPYNPV-SGACAAGSLSHTRFVANTTDGSKPVSKVN 117

Query: 222 SRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRI 281
             +   C   +  + L   +  G+ GL     ++P+ +A+   + N F +C  + G G  
Sbjct: 118 VGVLAACAPSKLLASLPRGS-TGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVA 176

Query: 282 SFG------DKGSPGQGETPFSLRQTHPTYNITITQVSVGGNAVNFEFS------AIFDS 329
            FG       + +     TP   +   P + I+   + VG   V            +  +
Sbjct: 177 IFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLST 236

Query: 330 GTSFTYLNDPAYTQISETFNSLAKEKRE-------TSTSDLPFEYCYVLS---PNQTNFE 379
              +  L    Y  + + F      +            +  PF  CY       N   + 
Sbjct: 237 RLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYA 296

Query: 380 YPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSD---------NVNIIGQNFM 430
            P V L + GG  + +     +V  +       C+  V+              I+G   M
Sbjct: 297 VPNVQLGLDGGSDWTMTGKNSMVDVKQGT---ACVAFVEMKGVAAGDGRAPAVILGGAQM 353

Query: 431 TGYNIVFDREKNVLGW 446
             + + FD EK  LG+
Sbjct: 354 EDFVLDFDMEKKRLGF 369
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query517
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.8e-52  Score=428.96  Aligned_cols=304  Identities=25%  Similarity=0.389  Sum_probs=249.1

Q ss_pred             eec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCccc
Q 010129           96 YRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLC  173 (517)
Q Consensus        96 ~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C  173 (517)
                      .++ |+.+..|+++|.||||||+|.|++||||+++||+|. |..|..+.         ++.|||++|+||+..       
T Consensus        48 ~~l~n~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~---------~~~yd~~~Sst~~~~-------  111 (370)
T d3psga_          48 EPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSD---------HNQFNPDDSSTFEAT-------  111 (370)
T ss_dssp             CTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT---------SCCBCGGGCTTCEEE-------
T ss_pred             cccccccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCccccc---------ccccCCCcccccccC-------
Confidence            345 677889999999999999999999999999999999 88876543         388999999999986       


Q ss_pred             CCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCC
Q 010129          174 ELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKT  253 (517)
Q Consensus       174 ~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~  253 (517)
                                 .|.|.+.| ++| .+.|.++.|++.++      ...++++.|||++...+.++.....+||+|||+...
T Consensus       112 -----------~~~~~~~Y-g~G-s~~G~~~~d~~~~~------~~~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~~~  172 (370)
T d3psga_         112 -----------SQELSITY-GTG-SMTGILGYDTVQVG------GISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSI  172 (370)
T ss_dssp             -----------EEEEEEES-SSC-EEEEEEEEEEEEET------TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGG
T ss_pred             -----------CCcEEEEe-CCc-eEEEEEEEEEEeee------ceeeeeeEEEEEeeccCceecccccccccccccCcc
Confidence                       78999999 554 58899999999998      457889999999998877666666799999998753


Q ss_pred             ------ChhHHHhhcCCC-CceeEEeeCC--CCCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeeeecc-
Q 010129          254 ------SVPSILANQGLI-PNSFSMCFGS--DGTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVNFE-  322 (517)
Q Consensus       254 ------S~~~ql~~~g~i-~~~FS~~l~~--~~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~-  322 (517)
                            .+..+|.++|+| .++||+|+.+  +..|.|+|||+|+. ..+.+.|++.....+|.|.++++.++++.+... 
T Consensus       173 ~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~~~w~v~~~~i~v~g~~~~~~~  252 (370)
T d3psga_         173 SASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIACSG  252 (370)
T ss_dssp             CGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEECTT
T ss_pred             cccCCCchhhhhhhhcccccceeEEEeecCCCCCceEecCCcCchhcccceeEEeecccceEEEEEeeEEeCCeEEecCC
Confidence                  477899999999 9999999988  45799999999988 556666777666778999999999999887653 


Q ss_pred             -CcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeE
Q 010129          323 -FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVI  401 (517)
Q Consensus       323 -~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~  401 (517)
                       ..+||||||++++||++++++|.+++.+....     . ..+...|+..      ..+|+|+|+| +|+++.|++++|+
T Consensus       253 ~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~~~~-----~-~~~~~~C~~~------~~~P~l~f~f-~g~~~~l~~~~yi  319 (370)
T d3psga_         253 GCQAIVDTGTSLLTGPTSAIANIQSDIGASENS-----D-GEMVISCSSI------DSLPDIVFTI-DGVQYPLSPSAYI  319 (370)
T ss_dssp             CEEEEECTTCCSEEEEHHHHHHHHHHTTCEECT-----T-CCEECCGGGG------GGCCCEEEEE-TTEEEEECHHHHE
T ss_pred             CccEEEecCCceEeCCHHHHHHHHHHhCCeeec-----C-CcEEEecccc------CCCceEEEEE-CCEEEEEChHHeE
Confidence             57999999999999999999999988654321     1 2234457654      5789999999 8999999999888


Q ss_pred             EEeCCCCeeEEEEEEEe----CCCceeechhhhceeEEEEeCCCCEEEEEec
Q 010129          402 VSSEPKGLYLYCLGVVK----SDNVNIIGQNFMTGYNIVFDREKNVLGWKAS  449 (517)
Q Consensus       402 ~~~~~~~~~~~Cl~~~~----~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~  449 (517)
                      +...+ . +..|+....    ..+.||||+.|||++|+|||++++||||||+
T Consensus       320 ~~~~~-~-c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~  369 (370)
T d3psga_         320 LQDDD-S-CTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPV  369 (370)
T ss_dssp             EECSS-C-EEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred             EEcCC-e-EEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEec
Confidence            76433 2 112222222    1247999999999999999999999999986
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure