Citrus Sinensis ID: 010181
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 516 | ||||||
| 255561959 | 585 | conserved hypothetical protein [Ricinus | 0.988 | 0.871 | 0.765 | 0.0 | |
| 302143593 | 563 | unnamed protein product [Vitis vinifera] | 0.974 | 0.893 | 0.747 | 0.0 | |
| 225465601 | 550 | PREDICTED: uncharacterized protein LOC10 | 0.912 | 0.856 | 0.719 | 0.0 | |
| 356574880 | 592 | PREDICTED: uncharacterized protein LOC10 | 0.982 | 0.856 | 0.701 | 0.0 | |
| 356535200 | 592 | PREDICTED: uncharacterized protein LOC10 | 0.990 | 0.863 | 0.681 | 0.0 | |
| 449470222 | 539 | PREDICTED: uncharacterized protein LOC10 | 0.881 | 0.844 | 0.698 | 0.0 | |
| 357441397 | 584 | hypothetical protein MTR_1g080320 [Medic | 0.974 | 0.861 | 0.675 | 0.0 | |
| 449477726 | 433 | PREDICTED: uncharacterized LOC101206485 | 0.839 | 1.0 | 0.710 | 0.0 | |
| 356504121 | 554 | PREDICTED: uncharacterized protein LOC10 | 0.895 | 0.833 | 0.671 | 0.0 | |
| 218191789 | 554 | hypothetical protein OsI_09379 [Oryza sa | 0.928 | 0.864 | 0.635 | 0.0 |
| >gi|255561959|ref|XP_002521988.1| conserved hypothetical protein [Ricinus communis] gi|223538792|gb|EEF40392.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/515 (76%), Positives = 441/515 (85%), Gaps = 5/515 (0%)
Query: 2 EFKFRCNHTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGALLTESVHEEREFLLK 61
EF TDCK KL ETERW +SQR T +E+VSLLH W ALL+ESV E E
Sbjct: 76 EFINVAASTDCKFKLMETERWDDSQR----THDEKVSLLHSAWSALLSESVDVEFENFQN 131
Query: 62 FGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPWTNRKGLLDMYPASTAKEQLGS 121
GL++S+VPN PHLENCKLSA IN RLD +AENESFPPWT KGLLDM+PASTA EQL
Sbjct: 132 LGLSKSAVPNGPHLENCKLSAQINKRLDKQAENESFPPWTTWKGLLDMHPASTANEQLRY 191
Query: 122 PRHRPISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGF 181
RH+ ISEG YPPWI+GSDE+NYPLTRKVQRDIW+HQHPPNC DPNV+FLVADWE+LPGF
Sbjct: 192 YRHQAISEGAYPPWISGSDEDNYPLTRKVQRDIWIHQHPPNCKDPNVKFLVADWEKLPGF 251
Query: 182 GIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRA 241
GIGAQ+ GM GLLAIA+ +KRVLVT+YYNRADHDGCKG+SRSSWSCYF PETSQECRD A
Sbjct: 252 GIGAQLVGMSGLLAIALKDKRVLVTSYYNRADHDGCKGTSRSSWSCYFFPETSQECRDHA 311
Query: 242 FELMDNKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMD 301
ELM NKEA E G ITTK+NY+SK+IW GR PR+WGDPWSYLQPTTEING+LI +H KMD
Sbjct: 312 LELMANKEAWENGSITTKENYNSKEIWTGRTPRIWGDPWSYLQPTTEINGSLITFHHKMD 371
Query: 302 RRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSD 361
RRWWRAQA+RYLMRF TEYTCGL+NVAR+AAFGKE AKMVL L +WP EV N SD
Sbjct: 372 RRWWRAQAIRYLMRFQTEYTCGLMNVARNAAFGKEVAKMVLASLEDKWPK-EVTNKPVSD 430
Query: 362 IEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLST 421
I+ FVWSSH+PW+PRP+LSMHVRMGDKACEMKVVEFE+YM LAD++R+ FPHLNSIWLST
Sbjct: 431 IQRFVWSSHKPWVPRPLLSMHVRMGDKACEMKVVEFEEYMHLADQLRRQFPHLNSIWLST 490
Query: 422 EMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFF 481
EMQEV+DK + Y W FY++NVTRQVGN TMA YEASLGR+TSTNYPLVNFLMAT++DFF
Sbjct: 491 EMQEVIDKLEKYTDWKFYYSNVTRQVGNTTMAEYEASLGRQTSTNYPLVNFLMATEADFF 550
Query: 482 IGALGSTWCFLIDGMRNTGGKVMSGYLSVNKDRFW 516
IGALGSTWCFLIDGMRNTGGKVM+GYLSVN+DRFW
Sbjct: 551 IGALGSTWCFLIDGMRNTGGKVMAGYLSVNRDRFW 585
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302143593|emb|CBI22346.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225465601|ref|XP_002266371.1| PREDICTED: uncharacterized protein LOC100261475 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356574880|ref|XP_003555571.1| PREDICTED: uncharacterized protein LOC100814689 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356535200|ref|XP_003536136.1| PREDICTED: uncharacterized protein LOC100789833 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449470222|ref|XP_004152817.1| PREDICTED: uncharacterized protein LOC101206485 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357441397|ref|XP_003590976.1| hypothetical protein MTR_1g080320 [Medicago truncatula] gi|355480024|gb|AES61227.1| hypothetical protein MTR_1g080320 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449477726|ref|XP_004155105.1| PREDICTED: uncharacterized LOC101206485 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356504121|ref|XP_003520847.1| PREDICTED: uncharacterized protein LOC100802896 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|218191789|gb|EEC74216.1| hypothetical protein OsI_09379 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 516 | ||||||
| TAIR|locus:2148715 | 535 | AT5G28910 "AT5G28910" [Arabido | 0.736 | 0.710 | 0.734 | 1.9e-177 | |
| TAIR|locus:2148695 | 536 | AT5G28960 "AT5G28960" [Arabido | 0.75 | 0.722 | 0.705 | 1.6e-171 |
| TAIR|locus:2148715 AT5G28910 "AT5G28910" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1580 (561.2 bits), Expect = 1.9e-177, Sum P(2) = 1.9e-177
Identities = 282/384 (73%), Positives = 327/384 (85%)
Query: 133 PPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCG 192
PPWI+G DEENYPLTR+VQRDIW+HQHP +C + +++FLVADWE LPGFGIGAQIAGM G
Sbjct: 156 PPWISGGDEENYPLTRRVQRDIWIHQHPLDCGNKSLKFLVADWETLPGFGIGAQIAGMTG 215
Query: 193 LLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALE 252
LLAIAINE RVLV NYYNRADHDGCKGS R +WSCYFL ETS+ECR RAF ++ +EA E
Sbjct: 216 LLAIAINENRVLVANYYNRADHDGCKGSFRGNWSCYFLQETSEECRKRAFAIVKKREAWE 275
Query: 253 KGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRY 312
GI+T K NYS+K+IWAG P+ WG PWSY++PTTEING+LI+ HRKMDRRWWRAQAVRY
Sbjct: 276 SGIVTGKQNYSTKEIWAGAIPKQWGKPWSYMKPTTEINGSLISNHRKMDRRWWRAQAVRY 335
Query: 313 LMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRP 372
LMR+ TEYTCGL+N+AR++AFGKEAAK+VL+ +W ++IE+ VWS H+P
Sbjct: 336 LMRYQTEYTCGLMNIARNSAFGKEAAKIVLSA--GDWRKKN--KKMRTEIEEQVWSDHKP 391
Query: 373 WIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKL 432
W+PRPMLS+HVRMGDKACEM+V E+YM LADRIR FP LN IWLSTEM+EVVD+SK
Sbjct: 392 WLPRPMLSVHVRMGDKACEMRVAALEEYMHLADRIRDRFPELNRIWLSTEMKEVVDRSKD 451
Query: 433 YPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFL 492
Y HW FY+T V RQVGN +MA YEASLGRE STNYPLVNFLMA+++DFF+GALGSTWCFL
Sbjct: 452 YAHWRFYYTEVARQVGNKSMAEYEASLGREMSTNYPLVNFLMASEADFFVGALGSTWCFL 511
Query: 493 IDGMRNTGGKVMSGYLSVNKDRFW 516
IDGMRNTGGKVMSGYLSVNKDRFW
Sbjct: 512 IDGMRNTGGKVMSGYLSVNKDRFW 535
|
|
| TAIR|locus:2148695 AT5G28960 "AT5G28960" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 516 | |||
| cd11300 | 328 | cd11300, Fut8_like, Alpha 1-6-fucosyltransferase | 7e-07 | |
| cd11296 | 206 | cd11296, O-FucT_like, GDP-fucose protein O-fucosyl | 4e-06 |
| >gnl|CDD|211386 cd11300, Fut8_like, Alpha 1-6-fucosyltransferase | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 7e-07
Identities = 45/175 (25%), Positives = 65/175 (37%), Gaps = 27/175 (15%)
Query: 146 LTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLV 205
L++ VQ+ I Q+P +C + LV + + GFG C ++A N R L+
Sbjct: 14 LSKLVQKRIHKLQNPKDC--SKAKKLVCNLNKGCGFGCQLHHVVYCLIVAYGTN--RTLI 69
Query: 206 TNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSK 265
D G S W FLP S+ C DR + A+ T D K
Sbjct: 70 L------DSKGW-RYSPGGWEKVFLP-LSETCTDR----SGDNTAVWWWEPTNSDVQVVK 117
Query: 266 QIWAGRAPRVWGD----PWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRF 316
P + P+ L ++ L H R WW Q ++YLMR
Sbjct: 118 ------LPIIDSLHSRPPFLPLAVPEDLAERLERLHGD-PRVWWIGQLLKYLMRP 165
|
Alpha 1,6-fucosyltransferase (Fut8) transfers a fucose moiety from GDP-fucose to the reducing terminal N-acetylglucosamine of the core structure of Asn-linked oligosaccharides, in a process termed core fucosylation. Core fucosylation is essential for the function of growth factor receptors. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 328 |
| >gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 516 | |||
| KOG3705 | 580 | consensus Glycoprotein 6-alpha-L-fucosyltransferas | 100.0 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 99.7 | |
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 99.05 | |
| PF01531 | 298 | Glyco_transf_11: Glycosyl transferase family 11; I | 98.45 | |
| PF03254 | 476 | XG_FTase: Xyloglucan fucosyltransferase; InterPro: | 98.11 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 97.04 |
| >KOG3705 consensus Glycoprotein 6-alpha-L-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-82 Score=649.93 Aligned_cols=312 Identities=21% Similarity=0.328 Sum_probs=271.6
Q ss_pred cCCCCCCcccCCccCChhhHHHHHHHHHhhcCCCCCCCCCCceEEEeecCCCCcchhHHHHHHHHHHHHHHhcCcEEEEe
Q 010181 128 SEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTN 207 (516)
Q Consensus 128 ~~~~~~~w~~g~d~e~~pLt~~vQr~I~~~QnP~dCs~A~~K~Lvc~~~~~cGfGcg~H~~~~C~~l~~A~~t~RtLIld 207 (516)
..+|+..|+ .+|...||++|||||.++|||+||++| |+|||+++++|||||+.||++||+| +||+|.||||++
T Consensus 178 q~dG~e~wR---~Kea~dlt~lvqrri~~LQNPkdCs~A--kkLVCnlnKgCGyGCQLHHVvYCfi--~AyaTqRtliLk 250 (580)
T KOG3705|consen 178 QLDGSEEWR---FKEATDLTQLVQRRIEKLQNPKDCSEA--KKLVCNLNKGCGYGCQLHHVVYCFI--TAYATQRTLILK 250 (580)
T ss_pred hccCcHHHH---HhHHhHHHHHHHHHHHHhcChHhhHHH--hhheeeccCCcccccceeeeeEeee--eeeecceEEEEe
Confidence 568899999 489999999999999999999999999 9999999999999999999999999 999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCccccccCCcccccccccc----cccchhhhccCceee--ccCCCCcccccCCCCCCCCCCCc
Q 010181 208 YYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFE----LMDNKEALEKGIITT--KDNYSSKQIWAGRAPRVWGDPWS 281 (516)
Q Consensus 208 ~~~~~~~~Gc~~~~~~~Wsc~F~p~sS~~C~~~a~~----~~~~~~~~~~~iv~~--~~~~~~~~~~~g~~P~~~~~P~~ 281 (516)
+.+|.|+.| ||+.+|.|. |+.|.++++. |..... ....||.+ .|++.++|+|+ |.++|++
T Consensus 251 s~gWrY~~g-------GWe~VF~pv-S~~c~D~~~~nT~~wpg~~~-~n~qVv~LpIvDSL~prPpyL-----PlAVPEd 316 (580)
T KOG3705|consen 251 SDGWRYSSG-------GWESVFKPV-SKCCFDEAVGNTEAWPGAEP-SNAQVVSLPIVDSLIPRPPYL-----PLAVPED 316 (580)
T ss_pred cCCceecCC-------Chhhhhhhh-hhcccccccccccCCCCCCC-CCceEEEeecccccCCCCCCc-----cccCcHH
Confidence 999988765 799999985 7899988653 332211 12456666 78899999999 9999999
Q ss_pred ccccccccccchhhhcccchhhHHHHHHHHHhhcCChHHHhhHHHHHhhhhhhHHHHHHHHhCCCCCCcchhcccCCccc
Q 010181 282 YLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSD 361 (516)
Q Consensus 282 ~~~~~~~~hg~p~~~~~~~~~~WW~gQ~~~YLmRp~~~~l~~Lln~~R~~afg~~aa~~~~~~l~~~w~~~~~~~~~~~~ 361 (516)
++++++++||+| .+||+||+++||||||+.+. +.|.+ ..+.
T Consensus 317 La~rL~rlHgdP--------~vwwVgqFikYL~Rpqp~t~-~~l~~------------------------------a~k~ 357 (580)
T KOG3705|consen 317 LAERLTRLHGDP--------PVWWVGQFIKYLMRPQPATQ-EKLDK------------------------------ALKS 357 (580)
T ss_pred HHHHHHHhcCCC--------ceeeHHHHHHHHhCCChhhH-HHHHH------------------------------HHHh
Confidence 999999999999 99999999999999999544 33322 1123
Q ss_pred hhhhhhccCCCCCCCCeEEEEEcCCCcc-ccccccCHHHHHHHHHHHHH-----hCCCCcEEEEeCCChHHHHHhh-cCC
Q 010181 362 IEDFVWSSHRPWIPRPMLSMHVRMGDKA-CEMKVVEFEKYMLLADRIRK-----HFPHLNSIWLSTEMQEVVDKSK-LYP 434 (516)
Q Consensus 362 i~~~v~s~~kp~~~~PiVGVHIRRgDK~-~Ea~~~~~eeYm~~Ve~~~~-----~~p~~r~IfLATDD~~Vi~eak-~Yp 434 (516)
|+ +.+||||||||||||+ +||++|+++|||.+|+.+++ ..|..||||||||||+|+.|+| +||
T Consensus 358 lg----------~~~PivGvhvRRTDKVGTEAAfH~~eEYM~~vE~~f~~le~rg~~~~rRiflAsDDp~vv~EAk~kYP 427 (580)
T KOG3705|consen 358 LG----------LDKPIVGVHVRRTDKVGTEAAFHALEEYMEWVEIWFKVLEKRGKPLERRIFLASDDPTVVPEAKNKYP 427 (580)
T ss_pred CC----------CCCceeeEEEEecccccchhhhhhHHHHHHHHHHHHHHHHHhCCchhheEEEecCCchhchHhhccCC
Confidence 44 7899999999999998 69999999999999998765 3567899999999999999999 999
Q ss_pred CceEEeec-eecccCCchhHHHhhhcCCcccchhHHHHHHHHhcCCceEEcCCCcHHHHHHHHHhccC-CcccceeeccC
Q 010181 435 HWNFYFTN-VTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGG-KVMSGYLSVNK 512 (516)
Q Consensus 435 ~y~f~~t~-I~r~~g~~s~~~~~~~~gs~~sl~~~lvDl~lLsecDyfVGT~SSnv~RLi~ELrqt~~-ka~~~F~Svd~ 512 (516)
+|.|+.++ |.+. +....|+++++++++++||++||.+||+||||||+|||++||||||.| ||.+.|+||||
T Consensus 428 nYe~igd~eia~~-------A~l~nRYTd~sL~GvIlDIh~LS~~d~LVCTFSSQVCRvaYEimQt~~pDa~~~FhSLDD 500 (580)
T KOG3705|consen 428 NYEVIGDTEIAKT-------AQLNNRYTDASLMGVILDIHILSKVDYLVCTFSSQVCRVAYEIMQTSGPDAGSKFHSLDD 500 (580)
T ss_pred CcEEeccHHHHHH-------hhccccchhhhhhheeeeeeeecccceEEEechHHHHHHHHHHHhccCCCcccccccccc
Confidence 99996444 3332 333455688999999999999999999999999999999999999998 99999999999
Q ss_pred CCCC
Q 010181 513 DRFW 516 (516)
Q Consensus 513 ~~~~ 516 (516)
|||.
T Consensus 501 IYYf 504 (580)
T KOG3705|consen 501 IYYF 504 (580)
T ss_pred eeee
Confidence 9984
|
|
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
| >PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >PF03254 XG_FTase: Xyloglucan fucosyltransferase; InterPro: IPR004938 Plant cell walls are crucial for development, signal transduction, and disease resistance in plants | Back alignment and domain information |
|---|
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 516 | |||
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 2e-46 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 |
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Length = 526 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 2e-46
Identities = 70/387 (18%), Positives = 126/387 (32%), Gaps = 81/387 (20%)
Query: 141 EENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINE 200
+E LT VQR I Q+P +C + LV + + G+G Q+ + IA
Sbjct: 120 KEAKDLTELVQRRITYLQNPKDC--SKAKKLVCNINKGCGYG--CQLHHVVYCFMIAYGT 175
Query: 201 KRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALEKGIITTKD 260
+R L+ N G W F P S+ C DR+ +
Sbjct: 176 QRTLILESQNWRYATG-------GWETVFRP-VSETCTDRSGISTGHW----------SG 217
Query: 261 NYSSKQIWAGRAPRVWGD----PWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRF 316
K + P V P+ L ++ L+ H WW +Q V+YL+R
Sbjct: 218 EVKDKNVQVVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHG-DPAVWWVSQFVKYLIRP 276
Query: 317 LTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRPWIPR 376
+ + A
Sbjct: 277 -QPWLEKEIEEATKKLG----------------------------------------FKH 295
Query: 377 PMLSMHVRMGDK-ACEMKVVEFEKYMLLAD-----RIRKHFPHLNSIWLSTEMQEVVDKS 430
P++ +HVR DK E E+YM+ + R+ ++L+T+ ++ ++
Sbjct: 296 PVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEA 355
Query: 431 K-LYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTW 489
K YP++ F N +++ + + E S +++ + +DF + S
Sbjct: 356 KTKYPNYEFISDN------SISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQV 409
Query: 490 CFLIDGMRNTGGKVMSGYLSVNKDRFW 516
C + + T S D ++
Sbjct: 410 CRVAYEIMQTLHPDASANFHSLDDIYY 436
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 516 | |||
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 100.0 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 99.84 | |
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 99.09 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 98.81 |
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-62 Score=525.24 Aligned_cols=314 Identities=21% Similarity=0.332 Sum_probs=252.8
Q ss_pred cCCCCCCcccCCccCChhhHHHHHHHHHhhcCCCCCCCCCCceEEEeecCCCCcchhHHHHHHHHHHHHHHhcCcEEEEe
Q 010181 128 SEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTN 207 (516)
Q Consensus 128 ~~~~~~~w~~g~d~e~~pLt~~vQr~I~~~QnP~dCs~A~~K~Lvc~~~~~cGfGcg~H~~~~C~~l~~A~~t~RtLIld 207 (516)
+.+|+..|+ ..+++|||++||++|+.+|||+||++| |||+|+++..|||||.+|++++|++ +|+++|||||+|
T Consensus 110 ~~~g~~~~r---~~~~~~lt~~vq~~i~~~QnP~~Cs~a--K~Lv~~~~~~~GfGs~lh~l~~~L~--~A~~~~Rtliid 182 (526)
T 2de0_X 110 QTDGAGDWR---EKEAKDLTELVQRRITYLQNPKDCSKA--KKLVCNINKGCGYGCQLHHVVYCFM--IAYGTQRTLILE 182 (526)
T ss_dssp HTTTHHHHH---HHHHHHHHHHHHHHHHHHHCCSCGGGS--CEEEEECCCSSCHHHHHHHHHHHHH--HHHHHTCEEEEE
T ss_pred hhhchhHHH---HHHHHHHHHHHHHHHHHhcCCCcCCCC--CEEEEEecCCCchHHHHHHHHHHHH--HHHhhCCEEEEE
Confidence 456777787 488999999999999999999999999 9999999888999999999999999 999999999999
Q ss_pred CCCCcCCCCCCCCCCCCCccccccCCcccccccc----cccccchhhhccCceee--ccCCCCcccccCCCCCCCCCCCc
Q 010181 208 YYNRADHDGCKGSSRSSWSCYFLPETSQECRDRA----FELMDNKEALEKGIITT--KDNYSSKQIWAGRAPRVWGDPWS 281 (516)
Q Consensus 208 ~~~~~~~~Gc~~~~~~~Wsc~F~p~sS~~C~~~a----~~~~~~~~~~~~~iv~~--~~~~~~~~~~~g~~P~~~~~P~~ 281 (516)
+.+|.+++| +|+|||.| .|++|..+. ..|..........||.. .+++.+.++|. |+++|.+
T Consensus 183 d~~w~Y~~g-------~w~~yF~P-~s~~C~~~~~~~~~~w~~~~~~~~~~vV~~~~i~~~~~~~~~~-----~~~~P~~ 249 (526)
T 2de0_X 183 SQNWRYATG-------GWETVFRP-VSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPRPPYL-----PLAVPED 249 (526)
T ss_dssp CTTCSSCTT-------CGGGTBCC-SCSSCCCCCCSCCCBCCCTTGGGGCSEEEECCGGGCSSCCSCC-----TTCEEGG
T ss_pred CCCCCcCCC-------CHHHhhhC-cCccccCCCccccCCCCCcccCCCcceEEeecccccccccccc-----ccccchh
Confidence 999877543 59999999 578998862 22332211123456654 33444555565 5689999
Q ss_pred ccccccccccchhhhcccchhhHHHHHHHHHhhcCChHHHhhHHHHHhhhhhhHHHHHHHHhCCCCCCcchhcccCCccc
Q 010181 282 YLQPTTEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSD 361 (516)
Q Consensus 282 ~~~~~~~~hg~p~~~~~~~~~~WW~gQ~~~YLmRp~~~~l~~Lln~~R~~afg~~aa~~~~~~l~~~w~~~~~~~~~~~~ 361 (516)
..+.+..+||+| ++||+||+++|||||++++ ++.+++.+. +
T Consensus 250 ~~~~L~~l~~dp--------~~w~~~q~~~yl~rP~~~i-~~~I~~~~~------------------------------~ 290 (526)
T 2de0_X 250 LADRLVRVHGDP--------AVWWVSQFVKYLIRPQPWL-EKEIEEATK------------------------------K 290 (526)
T ss_dssp GHHHHHHHCSCH--------HHHHHHHHHHHHTCBCHHH-HHHHHHHHH------------------------------H
T ss_pred HHHHHHhccCCc--------HHHHHHHHHHHHcCCCHHH-HHHHHHHHH------------------------------H
Confidence 999999999999 9999999999999999965 455554321 2
Q ss_pred hhhhhhccCCCCCCCCeEEEEEcCCCcc-ccccccCHHHHHHHHHHHHH-----hCCCCcEEEEeCCChHHHHHhh-cCC
Q 010181 362 IEDFVWSSHRPWIPRPMLSMHVRMGDKA-CEMKVVEFEKYMLLADRIRK-----HFPHLNSIWLSTEMQEVVDKSK-LYP 434 (516)
Q Consensus 362 i~~~v~s~~kp~~~~PiVGVHIRRgDK~-~Ea~~~~~eeYm~~Ve~~~~-----~~p~~r~IfLATDD~~Vi~eak-~Yp 434 (516)
++ ++.|+||||||||||+ .|+.++++++||++|++|++ ..+..++||||||||+|+++++ +||
T Consensus 291 l~----------~~~piVGVHIRrGDk~~~E~~~~~~~~Y~~~v~~~~~~l~~~~~~~~~~ifLATDDp~v~~e~k~~~p 360 (526)
T 2de0_X 291 LG----------FKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTKYP 360 (526)
T ss_dssp HT----------CCSSEEEEEECCC-----CCCSCSHHHHHHHHHHHHHHHHTTSCCSSCEEEEEESCHHHHHHHHHHCT
T ss_pred hC----------CCCCEEEEEEeCCCCCccccccCCHHHHHHHHHHHHHHHHhhcCCCCCeEEEEcCCHHHHHHHHHhCC
Confidence 33 6899999999999995 69999999999999998876 3456779999999999999999 899
Q ss_pred CceEEeeceecccCCchhHHHhhhcCCcccchhHHHHHHHHhcCCceEEcCCCcHHHHHHHHHhccC-CcccceeeccCC
Q 010181 435 HWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGG-KVMSGYLSVNKD 513 (516)
Q Consensus 435 ~y~f~~t~I~r~~g~~s~~~~~~~~gs~~sl~~~lvDl~lLsecDyfVGT~SSnv~RLi~ELrqt~~-ka~~~F~Svd~~ 513 (516)
+|+|+.+. .. ..+ .....+.+.+++.++++||+|||+||+||||+||||||++++||++.+ ++...|.|||++
T Consensus 361 ~~~~~~d~-~~---~~~--a~~~~R~s~~~l~~~l~DL~lLs~cd~~Vgt~sS~~srla~~l~~~~~~~~~~~~~SLD~~ 434 (526)
T 2de0_X 361 NYEFISDN-SI---SWS--AGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDI 434 (526)
T ss_dssp TSEEECCC-CS---SCS--SGGGGGTCCTHHHHHHHHHHHHHHSSEEEECTTSHHHHHHHHHHTTSSSCCTTCEEESSCC
T ss_pred CCEEecCc-cc---ccc--cCccccccHHHHHHHHHHHHHHhcCCeeecCCCCHHHHHHHHHhcCcCccccccccCCccc
Confidence 99986322 11 111 111233366788999999999999999999999999999999999987 788899999999
Q ss_pred CCC
Q 010181 514 RFW 516 (516)
Q Consensus 514 ~~~ 516 (516)
+.|
T Consensus 435 ~~~ 437 (526)
T 2de0_X 435 YYF 437 (526)
T ss_dssp SCC
T ss_pred ccc
Confidence 865
|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00